Query 011995
Match_columns 473
No_of_seqs 364 out of 2741
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 19:31:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 1.8E-56 6.3E-61 437.7 22.4 259 176-456 27-305 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-56 4.1E-61 437.2 19.9 262 175-459 13-291 (299)
3 4aoj_A High affinity nerve gro 100.0 7.5E-56 2.6E-60 437.4 23.7 261 175-458 41-320 (329)
4 3omv_A RAF proto-oncogene seri 100.0 4.9E-56 1.7E-60 433.4 21.5 258 175-458 36-301 (307)
5 4fih_A Serine/threonine-protei 100.0 1.2E-55 4E-60 436.3 20.3 249 175-451 74-324 (346)
6 4fie_A Serine/threonine-protei 100.0 4.4E-55 1.5E-59 442.5 21.3 249 175-451 151-401 (423)
7 4b9d_A Serine/threonine-protei 100.0 1.6E-55 5.4E-60 436.0 17.4 252 174-451 23-277 (350)
8 4ase_A Vascular endothelial gr 100.0 4.1E-55 1.4E-59 435.7 18.1 266 172-458 61-348 (353)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 8E-56 2.7E-60 431.2 11.7 246 175-449 32-283 (311)
10 4g3f_A NF-kappa-beta-inducing 100.0 4E-55 1.4E-59 431.2 16.7 255 174-460 57-319 (336)
11 3fpq_A Serine/threonine-protei 100.0 7.4E-55 2.5E-59 422.0 16.9 249 178-450 29-282 (290)
12 3hyh_A Carbon catabolite-derep 100.0 8.8E-54 3E-58 411.0 20.2 247 175-451 13-263 (275)
13 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-54 6.1E-59 421.5 12.0 250 175-450 24-281 (304)
14 3hmm_A TGF-beta receptor type- 100.0 3.6E-53 1.2E-57 414.6 15.4 273 175-459 3-299 (303)
15 4g31_A Eukaryotic translation 100.0 4.9E-52 1.7E-56 405.2 19.1 252 174-450 4-279 (299)
16 4b99_A Mitogen-activated prote 100.0 3.5E-50 1.2E-54 406.7 21.4 268 174-451 53-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 6.4E-49 2.2E-53 393.2 22.8 265 172-450 18-352 (361)
18 3v5w_A G-protein coupled recep 100.0 8.6E-49 2.9E-53 414.0 16.6 251 174-450 188-449 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 3.5E-48 1.2E-52 410.2 20.2 253 174-451 156-411 (573)
20 2qkw_B Protein kinase; three-h 100.0 5.3E-47 1.8E-51 373.9 21.3 283 165-458 29-316 (321)
21 3kul_A Ephrin type-A receptor 100.0 2.3E-46 8E-51 370.3 22.1 268 174-465 48-321 (325)
22 3uim_A Brassinosteroid insensi 100.0 2.1E-46 7.1E-51 370.2 20.7 293 159-458 14-312 (326)
23 2psq_A Fibroblast growth facto 100.0 3.9E-46 1.3E-50 375.4 21.7 263 174-458 80-365 (370)
24 3vhe_A Vascular endothelial gr 100.0 5.1E-46 1.8E-50 372.2 18.1 275 164-458 11-356 (359)
25 3p86_A Serine/threonine-protei 100.0 1.7E-45 5.8E-50 361.6 21.2 264 172-459 34-300 (309)
26 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-45 3.7E-50 362.6 18.3 261 174-460 9-285 (310)
27 3fxz_A Serine/threonine-protei 100.0 5.9E-45 2E-49 355.6 23.2 250 174-451 19-270 (297)
28 4euu_A Serine/threonine-protei 100.0 7.2E-45 2.5E-49 358.3 23.8 282 174-461 8-313 (319)
29 2qol_A Ephrin receptor; recept 100.0 3.4E-45 1.2E-49 368.9 20.6 263 174-460 44-312 (373)
30 2nru_A Interleukin-1 receptor- 100.0 1.5E-44 5.2E-49 353.6 24.6 283 161-457 11-306 (307)
31 3zgw_A Maternal embryonic leuc 100.0 2.8E-45 9.5E-50 365.6 18.9 250 173-451 8-261 (347)
32 3fe3_A MAP/microtubule affinit 100.0 2.9E-45 1E-49 362.9 18.7 249 174-451 14-265 (328)
33 3soc_A Activin receptor type-2 100.0 1E-45 3.6E-50 365.1 15.2 272 174-459 23-320 (322)
34 4hcu_A Tyrosine-protein kinase 100.0 1.3E-44 4.5E-49 347.5 21.7 255 174-458 9-267 (269)
35 3tt0_A Basic fibroblast growth 100.0 2.8E-44 9.6E-49 363.4 25.1 266 174-461 68-356 (382)
36 1mp8_A Focal adhesion kinase 1 100.0 6E-45 2E-49 352.3 19.0 260 174-458 14-277 (281)
37 3ugc_A Tyrosine-protein kinase 100.0 1.9E-45 6.5E-50 358.2 15.5 279 174-459 9-293 (295)
38 2c30_A Serine/threonine-protei 100.0 3.4E-44 1.2E-48 354.2 24.1 261 163-451 23-295 (321)
39 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-45 7.2E-50 371.0 15.7 259 174-459 113-376 (377)
40 3l9p_A Anaplastic lymphoma kin 100.0 7.5E-45 2.6E-49 365.6 19.4 264 174-459 70-347 (367)
41 1luf_A Muscle-specific tyrosin 100.0 1.6E-44 5.3E-49 359.0 21.1 268 171-460 43-338 (343)
42 2yab_A Death-associated protei 100.0 2.7E-44 9.1E-49 360.5 22.9 253 173-450 10-272 (361)
43 3poz_A Epidermal growth factor 100.0 8.1E-45 2.8E-49 359.5 18.4 259 174-457 14-278 (327)
44 3dtc_A Mitogen-activated prote 100.0 1.2E-44 4.1E-49 347.8 18.7 255 174-455 6-271 (271)
45 4eqm_A Protein kinase; transfe 100.0 1.3E-44 4.4E-49 352.7 19.2 264 174-461 10-279 (294)
46 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-44 5.6E-49 346.4 19.5 255 174-458 7-265 (268)
47 2ivs_A Proto-oncogene tyrosine 100.0 2.4E-44 8.3E-49 353.0 21.1 263 174-458 22-312 (314)
48 3gen_A Tyrosine-protein kinase 100.0 2.7E-44 9.4E-49 347.7 20.3 256 174-459 23-282 (283)
49 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-44 7.2E-49 353.3 19.7 266 174-460 22-310 (313)
50 1tki_A Titin; serine kinase, m 100.0 2.5E-44 8.4E-49 355.2 20.1 252 174-451 4-258 (321)
51 3kex_A Receptor tyrosine-prote 100.0 1.6E-44 5.3E-49 357.1 18.7 259 175-458 13-277 (325)
52 3lb7_A RAF proto-oncogene seri 100.0 4.4E-44 1.5E-48 351.1 21.7 260 175-460 36-303 (307)
53 3f66_A Hepatocyte growth facto 100.0 4.7E-44 1.6E-48 348.7 21.6 263 174-459 24-293 (298)
54 1o6l_A RAC-beta serine/threoni 100.0 2.1E-44 7.1E-49 358.0 19.4 249 174-451 4-261 (337)
55 3c1x_A Hepatocyte growth facto 100.0 1.9E-44 6.4E-49 363.4 18.9 264 175-461 89-359 (373)
56 1rjb_A FL cytokine receptor; k 100.0 2.4E-44 8.2E-49 358.1 19.3 264 174-458 44-335 (344)
57 2y0a_A Death-associated protei 100.0 6.9E-44 2.4E-48 352.8 22.3 253 174-451 10-272 (326)
58 3tki_A Serine/threonine-protei 100.0 2.2E-44 7.5E-49 355.9 18.3 252 174-451 6-262 (323)
59 3kmu_A ILK, integrin-linked ki 100.0 3.9E-44 1.3E-48 343.6 19.3 258 174-457 9-270 (271)
60 2bdw_A Hypothetical protein K1 100.0 7E-44 2.4E-48 357.8 22.0 255 172-451 26-285 (362)
61 3qup_A Tyrosine-protein kinase 100.0 3.7E-44 1.3E-48 353.6 19.5 271 173-463 21-304 (323)
62 3pls_A Macrophage-stimulating 100.0 7.9E-44 2.7E-48 346.7 21.3 263 176-461 22-291 (298)
63 4e5w_A Tyrosine-protein kinase 100.0 2.8E-44 9.4E-49 350.8 17.9 273 175-456 21-301 (302)
64 3lxp_A Non-receptor tyrosine-p 100.0 3E-44 1E-48 354.0 18.2 276 177-461 33-314 (318)
65 3soa_A Calcium/calmodulin-depe 100.0 7.9E-44 2.7E-48 366.4 21.8 255 172-451 8-268 (444)
66 3cc6_A Protein tyrosine kinase 100.0 5.9E-44 2E-48 345.2 19.6 259 174-457 11-273 (281)
67 2zv2_A Calcium/calmodulin-depe 100.0 6.8E-44 2.3E-48 347.8 19.9 251 174-450 12-292 (298)
68 1opk_A P150, C-ABL, proto-onco 100.0 6.4E-44 2.2E-48 372.7 21.0 260 173-460 218-481 (495)
69 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-43 6.4E-48 348.2 23.1 269 174-451 4-294 (317)
70 2izr_A Casein kinase I isoform 100.0 3.5E-44 1.2E-48 355.2 17.8 263 174-461 8-285 (330)
71 2xir_A Vascular endothelial gr 100.0 3.4E-44 1.2E-48 352.3 17.3 274 165-459 17-312 (316)
72 1qcf_A Haematopoetic cell kina 100.0 5.7E-44 2E-48 369.2 19.8 258 173-460 186-447 (454)
73 3lzb_A Epidermal growth factor 100.0 9.3E-44 3.2E-48 352.0 20.2 259 174-457 14-278 (327)
74 2pvf_A Fibroblast growth facto 100.0 2E-43 6.9E-48 350.3 22.4 265 174-460 34-321 (334)
75 3qd2_B Eukaryotic translation 100.0 8.8E-44 3E-48 351.4 19.5 253 173-450 4-325 (332)
76 1mqb_A Ephrin type-A receptor 100.0 2.8E-43 9.7E-48 349.3 22.7 265 175-463 44-315 (333)
77 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-43 6.5E-48 364.9 22.2 254 174-458 192-446 (450)
78 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.3E-44 7.8E-49 360.0 14.8 248 174-450 22-280 (353)
79 3c0i_A Peripheral plasma membr 100.0 1.1E-43 3.7E-48 355.0 19.6 254 174-450 23-286 (351)
80 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-43 3.8E-48 344.9 19.0 258 174-457 23-288 (289)
81 2i1m_A Macrophage colony-stimu 100.0 3.2E-44 1.1E-48 355.6 15.1 264 174-458 45-327 (333)
82 3kfa_A Tyrosine-protein kinase 100.0 1E-43 3.5E-48 344.3 18.1 262 173-462 11-276 (288)
83 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-43 4.7E-48 349.4 19.2 247 174-450 5-258 (318)
84 4eut_A Serine/threonine-protei 100.0 6.8E-44 2.3E-48 362.3 17.4 280 174-459 8-311 (396)
85 1csn_A Casein kinase-1; phosph 100.0 1.3E-43 4.3E-48 345.3 18.2 264 174-461 9-287 (298)
86 3a62_A Ribosomal protein S6 ki 100.0 2.1E-43 7.3E-48 349.4 20.1 251 174-450 16-276 (327)
87 1p4o_A Insulin-like growth fac 100.0 8.9E-44 3.1E-48 350.6 17.4 267 169-457 19-299 (322)
88 2ozo_A Tyrosine-protein kinase 100.0 2.3E-43 7.9E-48 377.3 21.8 254 182-461 343-602 (613)
89 3t9t_A Tyrosine-protein kinase 100.0 3.1E-43 1E-47 337.1 20.4 254 175-458 8-265 (267)
90 3brb_A Proto-oncogene tyrosine 100.0 5.5E-43 1.9E-47 343.7 22.5 268 172-459 31-310 (313)
91 1nxk_A MAP kinase-activated pr 100.0 7.9E-44 2.7E-48 362.2 17.0 251 174-451 60-322 (400)
92 3o0g_A Cell division protein k 100.0 4.5E-43 1.6E-47 341.0 21.5 265 175-450 2-282 (292)
93 4dc2_A Protein kinase C IOTA t 100.0 2E-43 6.8E-48 357.8 19.7 252 174-445 51-307 (396)
94 3llt_A Serine/threonine kinase 100.0 2.8E-43 9.6E-48 352.7 20.5 279 159-450 19-355 (360)
95 4f0f_A Serine/threonine-protei 100.0 1.7E-43 5.8E-48 342.8 18.2 257 174-455 18-287 (287)
96 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.7E-43 5.6E-48 353.4 18.6 247 174-450 40-293 (350)
97 4fr4_A YANK1, serine/threonine 100.0 1.1E-43 3.8E-48 358.5 17.5 251 174-450 14-271 (384)
98 1kob_A Twitchin; kinase, intra 100.0 2.9E-43 1E-47 356.1 20.6 253 174-451 50-305 (387)
99 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-43 8E-48 364.4 20.1 257 174-460 183-443 (452)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 4.6E-43 1.6E-47 343.8 21.2 255 175-460 8-266 (307)
101 3niz_A Rhodanese family protei 100.0 4.5E-43 1.5E-47 344.6 21.1 265 174-450 20-300 (311)
102 1fvr_A Tyrosine-protein kinase 100.0 2.5E-43 8.7E-48 348.5 19.2 264 175-461 25-304 (327)
103 3is5_A Calcium-dependent prote 100.0 2E-43 6.9E-48 342.5 18.1 253 174-450 21-278 (285)
104 1xjd_A Protein kinase C, theta 100.0 6E-44 2.1E-48 355.8 14.7 249 172-449 14-268 (345)
105 4fvq_A Tyrosine-protein kinase 100.0 7.3E-44 2.5E-48 345.6 14.8 262 174-464 7-282 (289)
106 3fdn_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 342.0 16.7 251 173-452 7-259 (279)
107 2i0e_A Protein kinase C-beta I 100.0 2.6E-43 9E-48 352.2 19.1 250 173-451 18-277 (353)
108 3q4u_A Activin receptor type-1 100.0 1.6E-43 5.6E-48 345.0 16.9 259 174-456 7-301 (301)
109 3op5_A Serine/threonine-protei 100.0 5.8E-44 2E-48 358.6 13.9 275 174-461 34-333 (364)
110 1u59_A Tyrosine-protein kinase 100.0 1.1E-42 3.7E-47 337.5 22.2 259 175-459 9-274 (287)
111 1ob3_A PFPK5, cell division co 100.0 7E-43 2.4E-47 339.1 20.9 264 175-450 2-280 (288)
112 3v8s_A RHO-associated protein 100.0 1.1E-43 3.9E-48 361.4 15.5 257 169-451 63-330 (410)
113 1qpc_A LCK kinase; alpha beta 100.0 7.2E-43 2.4E-47 337.0 20.2 256 174-459 12-271 (279)
114 3a8x_A Protein kinase C IOTA t 100.0 4.3E-43 1.5E-47 349.8 19.3 252 174-445 8-264 (345)
115 4ejn_A RAC-alpha serine/threon 100.0 1.4E-43 4.7E-48 365.6 16.1 248 174-450 147-404 (446)
116 2w4o_A Calcium/calmodulin-depe 100.0 4.1E-43 1.4E-47 350.5 19.0 251 173-451 51-306 (349)
117 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.8E-44 1.3E-48 355.9 11.4 248 174-451 8-259 (336)
118 3g33_A Cell division protein k 100.0 1.6E-42 5.5E-47 339.7 22.7 271 173-451 7-297 (308)
119 4aw2_A Serine/threonine-protei 100.0 6.9E-44 2.4E-48 365.8 13.4 261 168-451 67-339 (437)
120 2eue_A Carbon catabolite derep 100.0 6.3E-43 2.2E-47 336.8 19.3 247 175-451 13-263 (275)
121 3eqc_A Dual specificity mitoge 100.0 1.3E-43 4.4E-48 355.3 14.8 267 174-451 32-325 (360)
122 3lxl_A Tyrosine-protein kinase 100.0 2E-43 6.9E-48 349.2 15.9 285 174-466 22-312 (327)
123 3oz6_A Mitogen-activated prote 100.0 4.9E-43 1.7E-47 354.9 18.5 268 172-451 6-329 (388)
124 2h8h_A Proto-oncogene tyrosine 100.0 5.1E-43 1.8E-47 369.2 19.0 257 174-460 266-526 (535)
125 2a2a_A Death-associated protei 100.0 1.4E-42 4.8E-47 342.4 20.8 253 174-451 11-273 (321)
126 3hko_A Calcium/calmodulin-depe 100.0 5.1E-43 1.8E-47 348.5 17.7 261 169-451 20-331 (345)
127 4hgt_A Casein kinase I isoform 100.0 2.8E-43 9.7E-48 342.3 15.4 268 173-463 7-286 (296)
128 3ork_A Serine/threonine protei 100.0 2.4E-43 8.2E-48 346.3 14.9 262 174-458 11-282 (311)
129 2x4f_A Myosin light chain kina 100.0 5.3E-43 1.8E-47 352.8 17.7 248 178-450 92-342 (373)
130 2y94_A 5'-AMP-activated protei 100.0 8.3E-43 2.8E-47 361.4 19.4 248 174-450 15-266 (476)
131 2yfx_A Tyrosine-protein kinase 100.0 8.8E-43 3E-47 344.6 18.6 264 174-459 29-306 (327)
132 3ttj_A Mitogen-activated prote 100.0 2.2E-42 7.4E-47 358.1 22.4 266 174-451 61-356 (464)
133 2r5t_A Serine/threonine-protei 100.0 3.2E-43 1.1E-47 354.1 15.7 249 174-451 37-290 (373)
134 3kk8_A Calcium/calmodulin depe 100.0 1.6E-42 5.3E-47 335.4 19.9 253 174-451 5-262 (284)
135 3mdy_A Bone morphogenetic prot 100.0 1.5E-42 5.1E-47 343.7 20.1 267 169-460 31-334 (337)
136 1xbb_A Tyrosine-protein kinase 100.0 1.8E-42 6.3E-47 336.5 20.3 258 174-458 15-280 (291)
137 3uzp_A CKI-delta, CKID, casein 100.0 8.4E-43 2.9E-47 339.1 17.8 266 174-462 8-285 (296)
138 3uc3_A Serine/threonine-protei 100.0 5.8E-43 2E-47 351.0 16.7 252 174-451 19-275 (361)
139 2vgo_A Serine/threonine-protei 100.0 1E-42 3.5E-47 337.0 17.7 249 174-451 13-263 (284)
140 4agu_A Cyclin-dependent kinase 100.0 2.2E-42 7.5E-47 338.9 19.8 267 174-451 2-285 (311)
141 3a7i_A MST3 kinase, serine/thr 100.0 4E-42 1.4E-46 336.0 21.5 250 175-453 22-273 (303)
142 3mtl_A Cell division protein k 100.0 3E-43 1E-47 347.8 13.6 265 175-450 2-281 (324)
143 2vd5_A DMPK protein; serine/th 100.0 3.9E-43 1.3E-47 357.7 14.8 261 167-451 53-328 (412)
144 2v62_A Serine/threonine-protei 100.0 5.4E-43 1.8E-47 349.0 15.4 268 174-457 36-328 (345)
145 2w1i_A JAK2; chromosomal rearr 100.0 6.9E-43 2.3E-47 345.3 16.0 278 174-458 40-323 (326)
146 1u46_A ACK-1, activated CDC42 100.0 5.3E-43 1.8E-47 339.7 14.9 261 174-458 17-285 (291)
147 3f3z_A Calcium/calmodulin-depe 100.0 2.4E-42 8.3E-47 333.0 19.3 252 173-451 7-262 (277)
148 3p1a_A MYT1 kinase, membrane-a 100.0 3.8E-43 1.3E-47 345.0 13.9 246 174-450 56-304 (311)
149 3dls_A PAS domain-containing s 100.0 4.8E-43 1.6E-47 348.1 14.5 245 172-451 21-275 (335)
150 1u5q_A Serine/threonine protei 100.0 1.1E-42 3.9E-47 347.1 17.2 249 175-452 54-307 (348)
151 2h34_A Serine/threonine-protei 100.0 1.3E-42 4.4E-47 340.8 17.1 260 174-459 33-298 (309)
152 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-42 3.7E-47 344.5 16.5 266 173-450 32-318 (329)
153 3dbq_A Dual specificity protei 100.0 1.3E-42 4.4E-47 346.0 17.1 249 174-451 8-274 (343)
154 3rp9_A Mitogen-activated prote 100.0 2.1E-42 7.2E-47 357.9 19.3 267 174-451 52-397 (458)
155 2yex_A Serine/threonine-protei 100.0 1.8E-42 6.3E-47 333.3 17.5 253 173-451 5-262 (276)
156 3gni_B Strad alpha; kinase fol 100.0 3.5E-42 1.2E-46 348.6 20.4 269 174-451 24-334 (389)
157 2zmd_A Dual specificity protei 100.0 2.2E-42 7.4E-47 350.5 18.5 248 175-451 56-321 (390)
158 4fl3_A Tyrosine-protein kinase 100.0 3E-42 1E-46 369.8 20.6 251 181-458 375-632 (635)
159 2qr7_A Ribosomal protein S6 ki 100.0 7.7E-43 2.6E-47 347.5 14.9 252 173-451 20-278 (342)
160 3bhy_A Death-associated protei 100.0 4.6E-42 1.6E-46 331.9 19.8 260 174-458 4-275 (283)
161 2wqm_A Serine/threonine-protei 100.0 2.4E-42 8.3E-47 338.6 18.0 265 174-460 31-300 (310)
162 1byg_A CSK, protein (C-termina 100.0 1.8E-42 6.1E-47 334.2 16.5 254 174-458 20-274 (278)
163 2a19_B Interferon-induced, dou 100.0 1.5E-42 5.1E-47 335.2 15.9 255 173-461 9-278 (284)
164 1cm8_A Phosphorylated MAP kina 100.0 4.3E-42 1.5E-46 345.5 19.6 265 174-451 24-308 (367)
165 2rku_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 335.1 18.0 249 174-451 14-266 (294)
166 2owb_A Serine/threonine-protei 100.0 2.2E-42 7.6E-47 343.1 17.0 249 174-451 40-292 (335)
167 2j0j_A Focal adhesion kinase 1 100.0 4.5E-42 1.5E-46 369.7 20.7 260 173-457 388-651 (656)
168 2acx_A G protein-coupled recep 100.0 1.6E-42 5.5E-47 364.7 16.7 255 174-451 183-445 (576)
169 4aaa_A Cyclin-dependent kinase 100.0 1.6E-42 5.4E-47 343.5 15.6 267 174-451 24-307 (331)
170 3cok_A Serine/threonine-protei 100.0 1.6E-42 5.6E-47 334.3 15.1 251 173-451 9-263 (278)
171 2jii_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47 346.3 15.5 269 175-462 42-341 (352)
172 2jam_A Calcium/calmodulin-depe 100.0 3.6E-42 1.2E-46 336.6 17.4 253 173-451 7-262 (304)
173 3g2f_A Bone morphogenetic prot 100.0 1.1E-42 3.8E-47 344.8 13.9 272 174-461 12-322 (336)
174 2w5a_A Serine/threonine-protei 100.0 1.4E-42 4.9E-47 334.8 14.1 264 174-457 5-274 (279)
175 1ua2_A CAK, cell division prot 100.0 1.1E-41 3.7E-46 339.7 20.6 270 171-451 6-292 (346)
176 1t4h_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 333.6 17.3 252 176-450 27-282 (290)
177 3i6u_A CDS1, serine/threonine- 100.0 4.4E-42 1.5E-46 351.5 18.1 254 172-451 132-400 (419)
178 3lij_A Calcium/calmodulin depe 100.0 7.7E-42 2.6E-46 357.0 20.3 252 174-451 36-292 (494)
179 3nyv_A Calmodulin-domain prote 100.0 4.3E-42 1.5E-46 358.0 18.2 252 174-451 25-282 (484)
180 3q5i_A Protein kinase; CDPK, m 100.0 7.7E-42 2.6E-46 357.9 20.2 253 173-451 34-302 (504)
181 3kn6_A Ribosomal protein S6 ki 100.0 9.4E-43 3.2E-47 344.5 12.5 248 180-451 16-271 (325)
182 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.6E-42 2.6E-46 343.3 19.2 257 173-460 63-342 (365)
183 3lm5_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 337.0 19.8 261 168-451 21-288 (327)
184 3mwu_A Calmodulin-domain prote 100.0 6.6E-42 2.3E-46 356.8 19.1 253 173-451 20-277 (486)
185 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.3E-42 7.8E-47 339.9 14.5 258 174-461 32-306 (319)
186 2ac3_A MAP kinase-interacting 100.0 1E-41 3.5E-46 334.9 19.1 259 175-451 12-296 (316)
187 2y7j_A Phosphorylase B kinase 100.0 1.6E-41 5.4E-46 341.2 20.6 259 167-450 86-359 (365)
188 2clq_A Mitogen-activated prote 100.0 1.9E-41 6.4E-46 329.5 20.4 252 176-451 23-279 (295)
189 3sv0_A Casein kinase I-like; t 100.0 1.1E-41 3.8E-46 353.6 19.7 264 174-460 6-281 (483)
190 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-41 3.6E-46 357.4 19.8 254 174-450 184-448 (543)
191 3mi9_A Cell division protein k 100.0 1.7E-41 5.9E-46 338.7 20.3 269 174-451 16-312 (351)
192 2r3i_A Cell division protein k 100.0 1.9E-41 6.6E-46 330.2 20.2 266 175-450 3-283 (299)
193 3gxj_A TGF-beta receptor type- 100.0 1.6E-43 5.3E-48 345.3 5.3 260 174-460 2-300 (303)
194 3an0_A Dual specificity mitoge 100.0 1.1E-42 3.9E-47 345.5 11.5 261 173-459 49-321 (340)
195 3nsz_A CK II alpha, casein kin 100.0 1.6E-41 5.6E-46 335.5 19.7 261 174-450 35-319 (330)
196 3com_A Serine/threonine-protei 100.0 1.8E-41 6.2E-46 332.9 19.7 250 173-450 27-278 (314)
197 1b6c_B TGF-B superfamily recep 100.0 3.3E-41 1.1E-45 334.8 21.7 271 165-460 32-339 (342)
198 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-42 1.1E-46 340.0 14.2 260 166-450 15-286 (326)
199 3pfq_A PKC-B, PKC-beta, protei 100.0 7.2E-42 2.5E-46 369.2 18.1 249 173-450 339-597 (674)
200 2vwi_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46 335.5 14.2 261 174-450 14-287 (303)
201 3byv_A Rhoptry kinase; malaria 100.0 4.6E-43 1.6E-47 353.8 8.1 253 174-457 72-368 (377)
202 1x8b_A WEE1HU, WEE1-like prote 100.0 7.8E-42 2.7E-46 330.2 16.3 249 173-451 9-280 (289)
203 3ll6_A Cyclin G-associated kin 100.0 3.1E-42 1.1E-46 340.9 13.8 263 174-462 27-313 (337)
204 2wtk_C Serine/threonine-protei 100.0 2.7E-41 9.3E-46 330.1 20.2 253 173-451 3-264 (305)
205 1j1b_A Glycogen synthase kinas 100.0 5.5E-42 1.9E-46 350.9 15.9 266 174-451 53-337 (420)
206 2buj_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46 337.4 14.8 265 174-460 28-309 (317)
207 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-42 8.2E-47 345.8 12.7 257 174-452 53-323 (355)
208 3qyz_A Mitogen-activated prote 100.0 2.3E-41 7.8E-46 339.7 19.9 267 173-451 25-314 (364)
209 3n9x_A Phosphotransferase; mal 100.0 2.7E-41 9.3E-46 347.0 20.8 199 174-382 25-252 (432)
210 3kvw_A DYRK2, dual specificity 100.0 6.5E-41 2.2E-45 343.8 23.6 265 174-451 96-409 (429)
211 2h6d_A 5'-AMP-activated protei 100.0 8E-42 2.7E-46 329.0 15.8 249 174-451 10-262 (276)
212 2xrw_A Mitogen-activated prote 100.0 4.7E-41 1.6E-45 338.4 22.0 266 174-451 24-319 (371)
213 4e7w_A Glycogen synthase kinas 100.0 9.3E-42 3.2E-46 346.3 16.8 266 174-451 39-322 (394)
214 3eb0_A Putative uncharacterize 100.0 8.2E-42 2.8E-46 345.4 16.1 268 171-450 3-321 (383)
215 1wak_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 340.4 21.4 266 174-450 36-391 (397)
216 3pg1_A Mitogen-activated prote 100.0 2.4E-41 8.3E-46 338.9 18.9 276 166-451 13-317 (362)
217 2fst_X Mitogen-activated prote 100.0 1.7E-41 5.7E-46 341.2 17.1 265 174-451 28-312 (367)
218 3fme_A Dual specificity mitoge 100.0 1.4E-41 4.7E-46 329.6 15.7 259 174-456 6-274 (290)
219 3e3p_A Protein kinase, putativ 100.0 5.5E-41 1.9E-45 335.8 20.3 280 168-456 16-322 (360)
220 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-41 7.4E-46 337.1 16.5 266 174-450 30-322 (348)
221 1phk_A Phosphorylase kinase; g 100.0 7.1E-41 2.4E-45 326.0 19.7 253 173-450 15-283 (298)
222 2ycf_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 332.4 17.7 252 173-450 8-274 (322)
223 2j7t_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 331.4 14.9 251 174-450 18-275 (302)
224 3rgf_A Cyclin-dependent kinase 100.0 6.5E-41 2.2E-45 341.3 19.5 270 174-451 19-334 (405)
225 3q60_A ROP5B; pseudokinase, tr 100.0 5.5E-42 1.9E-46 345.1 11.1 257 175-450 62-352 (371)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-41 7.9E-46 337.6 15.4 267 174-451 10-306 (353)
227 1z57_A Dual specificity protei 100.0 2.2E-40 7.6E-45 327.7 21.9 266 174-451 13-329 (339)
228 1blx_A Cyclin-dependent kinase 100.0 2.1E-40 7.2E-45 326.9 21.1 273 172-451 8-297 (326)
229 1zy4_A Serine/threonine-protei 100.0 6.9E-41 2.4E-45 326.1 16.9 253 173-451 4-284 (303)
230 4exu_A Mitogen-activated prote 100.0 2.4E-40 8.3E-45 333.2 21.0 265 174-451 41-324 (371)
231 2i6l_A Mitogen-activated prote 100.0 6.2E-41 2.1E-45 329.2 16.2 266 174-451 10-306 (320)
232 2iwi_A Serine/threonine-protei 100.0 2.6E-41 9E-46 331.5 12.9 246 171-451 27-284 (312)
233 2wei_A Calmodulin-domain prote 100.0 2.5E-40 8.5E-45 320.8 18.7 253 172-450 19-276 (287)
234 3aln_A Dual specificity mitoge 100.0 1.2E-40 4.1E-45 329.1 16.7 257 174-451 21-286 (327)
235 3coi_A Mitogen-activated prote 100.0 4.3E-40 1.5E-44 328.9 20.6 264 174-451 23-306 (353)
236 3fhr_A MAP kinase-activated pr 100.0 8E-41 2.7E-45 332.2 15.2 256 173-451 26-288 (336)
237 2vx3_A Dual specificity tyrosi 100.0 4.8E-40 1.6E-44 332.3 21.0 265 173-450 52-372 (382)
238 2eu9_A Dual specificity protei 100.0 5.9E-40 2E-44 327.0 21.3 271 174-456 18-341 (355)
239 1q8y_A SR protein kinase; tran 100.0 4.4E-40 1.5E-44 330.6 19.8 267 174-451 18-334 (373)
240 3a99_A Proto-oncogene serine/t 100.0 2.9E-41 9.9E-46 333.0 10.4 248 169-451 37-294 (320)
241 3cek_A Dual specificity protei 100.0 2.5E-40 8.6E-45 324.8 16.3 259 165-452 18-294 (313)
242 3qa8_A MGC80376 protein; kinas 100.0 6.9E-40 2.3E-44 348.4 16.5 275 174-459 13-311 (676)
243 2dyl_A Dual specificity mitoge 100.0 1.4E-39 4.9E-44 319.6 16.7 251 174-450 24-283 (318)
244 2rio_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 331.8 18.7 248 176-450 16-295 (434)
245 3p23_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 328.2 17.2 246 174-450 23-283 (432)
246 3uqc_A Probable conserved tran 100.0 7.6E-39 2.6E-43 310.8 14.8 235 175-459 31-267 (286)
247 2pzi_A Probable serine/threoni 100.0 6.9E-39 2.4E-43 347.3 14.3 244 174-455 79-326 (681)
248 3m2w_A MAP kinase-activated pr 100.0 7.1E-38 2.4E-42 305.6 15.8 231 174-451 16-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.1E-38 3.8E-43 325.6 9.9 246 174-450 77-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 310.6 9.9 245 174-449 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.4E-31 8.1E-36 281.4 5.3 184 183-381 242-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.4E-28 1.2E-32 255.7 4.3 183 178-383 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.2E-23 7.6E-28 201.3 10.9 163 170-367 85-274 (282)
254 1zth_A RIO1 serine protein kin 99.8 5.3E-19 1.8E-23 168.3 11.1 138 177-334 49-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-16 1.2E-20 155.5 7.7 138 176-333 96-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp 99.3 8.3E-12 2.8E-16 118.3 11.1 148 169-332 8-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.9E-15 109.9 9.3 139 174-333 19-214 (264)
258 3dxp_A Putative acyl-COA dehyd 99.1 3.4E-10 1.1E-14 112.5 11.9 145 179-333 42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic 98.9 2.5E-09 8.7E-14 103.6 9.8 187 180-382 25-287 (304)
260 3r70_A Aminoglycoside phosphot 98.6 2.3E-07 7.8E-12 90.4 12.5 137 176-334 38-238 (320)
261 3tdw_A Gentamicin resistance p 98.4 2.9E-06 9.9E-11 82.1 13.5 136 181-333 25-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp 98.3 4.3E-06 1.5E-10 79.0 12.4 136 182-333 31-223 (272)
263 3ovc_A Hygromycin-B 4-O-kinase 98.2 5.1E-06 1.7E-10 82.4 10.7 144 178-333 44-243 (362)
264 3d1u_A Putative fructosamine-3 98.2 1.9E-05 6.5E-10 75.6 14.1 77 178-265 18-97 (288)
265 3ats_A Putative uncharacterize 98.1 1.2E-05 4.2E-10 79.2 11.8 87 181-267 26-122 (357)
266 2olc_A MTR kinase, methylthior 97.9 0.00011 3.8E-09 73.5 12.7 77 180-263 35-120 (397)
267 2q83_A YTAA protein; 2635576, 97.8 0.00012 3.9E-09 71.3 12.0 31 302-332 221-251 (346)
268 3jr1_A Putative fructosamine-3 97.5 0.0006 2E-08 65.8 11.8 138 180-329 41-232 (312)
269 2pyw_A Uncharacterized protein 97.3 0.0013 4.4E-08 66.2 11.2 75 303-378 232-312 (420)
270 3f7w_A Putative fructosamine-3 97.2 0.0017 6E-08 61.6 11.3 79 176-265 16-97 (288)
271 2ppq_A HSK, HK, homoserine kin 97.2 0.0015 5E-08 63.0 10.7 159 164-332 6-216 (322)
272 3csv_A Aminoglycoside phosphot 97.1 0.0017 5.8E-08 63.0 10.0 32 302-333 182-217 (333)
273 3dxq_A Choline/ethanolamine ki 97.1 0.0017 5.7E-08 62.1 9.8 31 302-333 172-202 (301)
274 1zyl_A Hypothetical protein YI 97.1 0.012 4.1E-07 56.6 16.0 159 164-333 10-223 (328)
275 1nw1_A Choline kinase (49.2 KD 96.8 0.0026 8.8E-08 64.3 8.5 76 181-265 79-159 (429)
276 2qg7_A Ethanolamine kinase PV0 96.8 0.0042 1.4E-07 63.2 9.9 74 181-265 114-188 (458)
277 3feg_A Choline/ethanolamine ki 96.7 0.005 1.7E-07 61.0 9.3 144 181-332 56-253 (379)
278 3c5i_A Choline kinase; choline 96.5 0.0085 2.9E-07 59.0 9.4 29 303-332 212-240 (369)
279 2yle_A Protein spire homolog 1 96.3 0.0075 2.6E-07 54.4 6.8 98 263-377 33-131 (229)
280 3f2s_A CK, chetk-alpha, cholin 95.9 0.027 9.3E-07 56.0 9.5 31 302-332 243-279 (401)
281 3rgz_A Protein brassinosteroid 94.4 0.013 4.5E-07 63.6 2.0 61 34-103 683-743 (768)
282 3mes_A Choline kinase; malaria 94.1 0.24 8.3E-06 49.5 10.6 143 181-332 76-290 (424)
283 3oja_A Leucine-rich immune mol 93.4 0.0004 1.4E-08 71.5 -11.7 31 218-248 321-351 (487)
284 3g15_A CK, chetk-alpha, cholin 91.5 0.73 2.5E-05 45.6 9.7 29 304-332 245-279 (401)
285 4ann_A ESSB; membrane protein, 88.9 1.6 5.4E-05 39.1 8.6 115 234-383 43-158 (215)
286 3i1a_A Spectinomycin phosphotr 88.1 0.36 1.2E-05 46.6 4.1 32 302-333 205-236 (339)
287 3rgz_A Protein brassinosteroid 87.8 0.21 7.1E-06 54.1 2.5 46 31-80 632-677 (768)
288 1ogq_A PGIP-2, polygalacturona 86.8 0.19 6.4E-06 47.9 1.3 65 29-102 242-306 (313)
289 4ano_A ESSB; membrane protein, 86.0 2.2 7.6E-05 38.2 7.8 115 234-383 48-163 (219)
290 3g39_A Variable lymphocyte rec 83.4 0.63 2.2E-05 39.8 2.9 46 29-78 28-73 (170)
291 2r9u_A Variable lymphocyte rec 81.9 0.79 2.7E-05 39.4 2.9 44 29-76 31-74 (174)
292 1w8a_A SLIT protein; signaling 81.6 0.33 1.1E-05 42.5 0.3 40 33-76 56-95 (192)
293 3g39_A Variable lymphocyte rec 80.5 0.58 2E-05 40.0 1.6 44 31-78 54-97 (170)
294 2ifg_A High affinity nerve gro 80.3 0.58 2E-05 44.9 1.7 41 33-77 33-74 (347)
295 2r9u_A Variable lymphocyte rec 78.6 0.73 2.5E-05 39.6 1.6 43 31-77 57-99 (174)
296 2v70_A SLIT-2, SLIT homolog 2 77.7 0.65 2.2E-05 41.6 1.0 45 31-79 81-125 (220)
297 2ifg_A High affinity nerve gro 75.1 0.9 3.1E-05 43.6 1.3 43 31-77 56-98 (347)
298 1w8a_A SLIT protein; signaling 74.6 1.1 3.7E-05 39.1 1.6 62 29-98 27-89 (192)
299 4fcg_A Uncharacterized protein 73.5 1.6 5.4E-05 41.7 2.6 42 33-78 231-272 (328)
300 2wfh_A SLIT homolog 2 protein 72.3 1.2 4.1E-05 38.9 1.3 43 32-78 55-97 (193)
301 2v9t_B SLIT homolog 2 protein 71.9 1.2 4.3E-05 39.7 1.4 40 33-76 82-121 (220)
302 2wfh_A SLIT homolog 2 protein 71.0 2.1 7E-05 37.4 2.5 47 29-80 29-75 (193)
303 4g8a_A TOLL-like receptor 4; l 70.6 1.3 4.4E-05 46.0 1.3 42 33-78 520-561 (635)
304 2v70_A SLIT-2, SLIT homolog 2 70.3 1.8 6.2E-05 38.6 2.1 60 31-98 57-116 (220)
305 3rfe_A Platelet glycoprotein I 68.9 2.2 7.4E-05 34.8 2.1 38 29-69 29-66 (130)
306 1ogq_A PGIP-2, polygalacturona 68.8 1.3 4.5E-05 41.9 0.8 47 31-81 101-147 (313)
307 2o6r_A Variable lymphocyte rec 66.9 3.4 0.00012 35.1 3.0 45 29-77 26-70 (177)
308 3cxl_A N-chimerin; SH2, RHO-GA 66.4 1.5 5.3E-05 44.2 0.8 61 180-246 147-214 (463)
309 3m19_A Variable lymphocyte rec 66.1 2.1 7.2E-05 38.8 1.6 34 33-69 109-142 (251)
310 1jl5_A Outer protein YOPM; leu 65.5 0.65 2.2E-05 46.8 -2.2 52 25-81 5-56 (454)
311 2v9t_B SLIT homolog 2 protein 65.2 2.3 8E-05 37.8 1.7 48 29-80 30-77 (220)
312 3e6j_A Variable lymphocyte rec 65.1 3.7 0.00013 36.7 3.0 42 28-73 37-78 (229)
313 2o6r_A Variable lymphocyte rec 63.5 3.4 0.00012 35.0 2.4 43 31-77 52-94 (177)
314 3m19_A Variable lymphocyte rec 63.0 4.2 0.00014 36.7 3.1 47 29-79 33-79 (251)
315 4fcg_A Uncharacterized protein 62.5 3.7 0.00013 39.0 2.7 43 32-79 207-249 (328)
316 2ell_A Acidic leucine-rich nuc 62.3 2.9 9.9E-05 35.1 1.6 46 25-74 18-64 (168)
317 3e6j_A Variable lymphocyte rec 62.0 3.9 0.00013 36.5 2.6 44 31-78 64-107 (229)
318 3rfs_A Internalin B, repeat mo 58.7 3.4 0.00012 38.0 1.6 41 32-76 134-174 (272)
319 3rfs_A Internalin B, repeat mo 58.4 4.7 0.00016 37.0 2.5 44 31-78 157-200 (272)
320 4g8a_A TOLL-like receptor 4; l 58.1 3.1 0.00011 43.0 1.3 46 29-78 50-95 (635)
321 1dce_A Protein (RAB geranylger 58.0 3.9 0.00013 42.3 2.1 33 33-69 465-497 (567)
322 2o6s_A Variable lymphocyte rec 56.0 5.7 0.00019 34.6 2.5 43 31-77 52-94 (208)
323 2je0_A Acidic leucine-rich nuc 56.0 3.8 0.00013 33.5 1.3 39 28-69 14-53 (149)
324 2o6s_A Variable lymphocyte rec 54.6 7.1 0.00024 33.9 2.9 44 29-76 26-69 (208)
325 1jl5_A Outer protein YOPM; leu 52.9 3.9 0.00013 40.9 1.0 34 32-73 338-371 (454)
326 3rw6_A Nuclear RNA export fact 52.9 3.1 0.00011 38.6 0.3 39 32-74 171-211 (267)
327 4b8c_D Glucose-repressible alc 52.3 8.5 0.00029 41.1 3.6 43 31-79 247-289 (727)
328 2ft3_A Biglycan; proteoglycan, 51.9 16 0.00054 34.4 5.1 47 30-80 192-238 (332)
329 4eco_A Uncharacterized protein 50.6 4.2 0.00014 42.6 0.9 46 31-80 206-270 (636)
330 4glp_A Monocyte differentiatio 49.3 9 0.00031 35.8 2.9 43 32-78 198-243 (310)
331 2je0_A Acidic leucine-rich nuc 49.3 3.5 0.00012 33.8 -0.0 42 31-78 42-83 (149)
332 1p9a_G Platelet glycoprotein I 49.1 5.6 0.00019 37.0 1.4 34 33-69 126-159 (290)
333 1xku_A Decorin; proteoglycan, 49.1 8.7 0.0003 36.1 2.8 48 29-80 50-97 (330)
334 1p9a_G Platelet glycoprotein I 48.0 8.8 0.0003 35.6 2.6 43 30-77 76-118 (290)
335 4eco_A Uncharacterized protein 48.0 3 0.0001 43.8 -0.8 47 31-80 249-296 (636)
336 1dce_A Protein (RAB geranylger 47.6 7.4 0.00025 40.2 2.1 58 31-98 486-544 (567)
337 2z81_A CD282 antigen, TOLL-lik 47.3 5.5 0.00019 40.5 1.1 40 32-77 452-491 (549)
338 2o6q_A Variable lymphocyte rec 46.7 6.9 0.00024 35.7 1.6 42 31-76 133-174 (270)
339 3zyi_A Leucine-rich repeat-con 46.4 7 0.00024 38.8 1.7 48 29-80 73-120 (452)
340 3t6q_A CD180 antigen; protein- 46.0 5.1 0.00017 41.4 0.6 40 33-77 502-541 (606)
341 4ay9_X Follicle-stimulating ho 45.9 4.2 0.00014 38.9 -0.1 45 29-77 28-72 (350)
342 1ozn_A Reticulon 4 receptor; N 45.4 6.7 0.00023 36.0 1.3 48 29-80 30-77 (285)
343 2z66_A Variable lymphocyte rec 45.4 9.1 0.00031 35.5 2.2 45 30-78 174-218 (306)
344 3v47_A TOLL-like receptor 5B a 45.1 9.4 0.00032 37.6 2.4 39 31-73 347-385 (455)
345 2ft3_A Biglycan; proteoglycan, 44.8 17 0.00057 34.2 4.0 45 31-80 217-261 (332)
346 1wwl_A Monocyte differentiatio 43.7 5.8 0.0002 37.2 0.5 45 30-79 94-140 (312)
347 4ecn_A Leucine-rich repeat pro 43.6 5.9 0.0002 43.4 0.6 47 31-81 448-513 (876)
348 3oja_A Leucine-rich immune mol 43.1 5.2 0.00018 40.4 0.1 44 29-76 32-75 (487)
349 3a79_B TLR6, VLRB.59, TOLL-lik 42.8 10 0.00035 38.8 2.3 48 29-80 50-97 (562)
350 4ezg_A Putative uncharacterize 42.6 4.1 0.00014 35.3 -0.7 43 31-77 88-130 (197)
351 2ell_A Acidic leucine-rich nuc 42.4 4.8 0.00017 33.7 -0.2 41 32-78 50-90 (168)
352 2xot_A Amphoterin-induced prot 42.0 7.8 0.00027 37.2 1.2 45 30-78 38-83 (361)
353 2id5_A Lingo-1, leucine rich r 42.0 8.8 0.0003 38.2 1.6 49 28-80 29-77 (477)
354 4ecn_A Leucine-rich repeat pro 41.9 4.1 0.00014 44.6 -0.9 47 31-80 491-538 (876)
355 2z62_A TOLL-like receptor 4, v 41.8 9.3 0.00032 34.8 1.6 46 29-78 26-71 (276)
356 3zyj_A Leucine-rich repeat-con 41.3 6.1 0.00021 39.1 0.3 35 32-69 208-242 (440)
357 1wwl_A Monocyte differentiatio 41.1 7.9 0.00027 36.2 1.0 35 32-69 150-184 (312)
358 2z63_A TOLL-like receptor 4, v 41.0 12 0.00041 38.0 2.5 41 32-76 471-511 (570)
359 3t6q_A CD180 antigen; protein- 40.5 9.8 0.00034 39.2 1.7 48 29-80 31-78 (606)
360 2z63_A TOLL-like receptor 4, v 40.0 7.3 0.00025 39.7 0.7 45 31-79 445-490 (570)
361 1ozn_A Reticulon 4 receptor; N 39.9 14 0.00047 33.8 2.5 44 31-78 80-124 (285)
362 2x6h_A GH13170P, VPS34, phosph 39.8 41 0.0014 35.5 6.3 44 281-331 529-574 (696)
363 2xot_A Amphoterin-induced prot 39.3 11 0.00036 36.3 1.6 45 30-78 63-107 (361)
364 2z62_A TOLL-like receptor 4, v 39.1 14 0.00048 33.6 2.4 44 30-77 199-242 (276)
365 3vq2_A TLR4, TOLL-like recepto 39.1 7.6 0.00026 40.1 0.6 43 32-78 449-492 (606)
366 3zyi_A Leucine-rich repeat-con 39.0 7 0.00024 38.8 0.3 30 32-61 219-248 (452)
367 2o6q_A Variable lymphocyte rec 38.9 17 0.00059 33.0 3.0 41 29-73 35-75 (270)
368 2z7x_B TOLL-like receptor 1, v 38.9 7.3 0.00025 39.3 0.4 47 30-80 20-66 (520)
369 2z81_A CD282 antigen, TOLL-lik 38.8 11 0.00038 38.2 1.8 46 30-79 25-70 (549)
370 3vq2_A TLR4, TOLL-like recepto 38.5 11 0.00037 38.9 1.6 47 29-79 30-76 (606)
371 4b8c_D Glucose-repressible alc 38.5 7 0.00024 41.8 0.2 42 33-79 295-336 (727)
372 3v47_A TOLL-like receptor 5B a 38.4 9.4 0.00032 37.6 1.1 45 29-77 28-72 (455)
373 1ziw_A TOLL-like receptor 3; i 37.2 16 0.00055 38.2 2.8 48 29-80 23-70 (680)
374 1a9n_A U2A', U2A'; complex (nu 36.3 7.1 0.00024 33.0 -0.2 37 32-74 43-79 (176)
375 1ds9_A Outer arm dynein; leuci 35.8 9.6 0.00033 32.9 0.6 40 32-76 19-64 (198)
376 3g06_A SSPH2 (leucine-rich rep 35.3 8.1 0.00028 40.5 0.1 40 33-77 263-302 (622)
377 3j0a_A TOLL-like receptor 5; m 34.7 8.4 0.00029 41.9 0.1 41 32-76 481-521 (844)
378 3oja_B Anopheles plasmodium-re 34.3 18 0.00062 37.3 2.5 38 31-72 99-136 (597)
379 2z66_A Variable lymphocyte rec 34.1 14 0.00049 34.1 1.6 60 31-98 150-210 (306)
380 2z80_A TOLL-like receptor 2, v 34.0 15 0.00051 34.9 1.7 46 30-79 51-96 (353)
381 3j0a_A TOLL-like receptor 5; m 33.8 15 0.0005 39.9 1.8 35 32-69 98-134 (844)
382 4glp_A Monocyte differentiatio 33.6 14 0.00049 34.3 1.5 42 32-77 92-135 (310)
383 1xku_A Decorin; proteoglycan, 32.2 17 0.00059 34.0 1.8 46 30-79 191-236 (330)
384 3zyj_A Leucine-rich repeat-con 32.1 15 0.00052 36.1 1.5 46 29-78 62-107 (440)
385 3a79_B TLR6, VLRB.59, TOLL-lik 31.4 13 0.00044 38.0 0.8 43 31-78 76-118 (562)
386 3ls8_A Phosphatidylinositol 3- 31.3 80 0.0027 32.7 6.7 46 279-331 453-500 (614)
387 3o53_A Protein LRIM1, AGAP0063 31.3 7.1 0.00024 36.7 -1.1 43 30-76 33-75 (317)
388 3oja_B Anopheles plasmodium-re 30.3 22 0.00076 36.6 2.4 45 31-79 75-119 (597)
389 3cvr_A Invasion plasmid antige 30.2 8.6 0.00029 39.8 -0.8 43 34-81 210-252 (571)
390 2id5_A Lingo-1, leucine rich r 28.9 22 0.00076 35.2 2.1 40 31-74 56-95 (477)
391 1ziw_A TOLL-like receptor 3; i 28.3 25 0.00085 36.7 2.4 42 32-77 98-139 (680)
392 2z7x_B TOLL-like receptor 1, v 27.3 11 0.00039 37.9 -0.5 42 31-77 45-86 (520)
393 3o6n_A APL1; leucine-rich repe 25.8 31 0.0011 33.1 2.4 40 33-76 71-110 (390)
394 3o6n_A APL1; leucine-rich repe 25.5 24 0.00083 33.8 1.6 38 31-72 93-130 (390)
395 2xwt_C Thyrotropin receptor; s 25.0 15 0.0005 32.7 -0.1 38 29-69 29-66 (239)
396 1a9n_A U2A', U2A'; complex (nu 25.0 21 0.00071 30.0 0.9 40 29-73 17-56 (176)
397 2z80_A TOLL-like receptor 2, v 24.6 22 0.00075 33.6 1.1 42 31-76 277-318 (353)
398 3i1a_A Spectinomycin phosphotr 24.3 2.5E+02 0.0084 26.2 8.6 90 188-301 36-132 (339)
399 2xwt_C Thyrotropin receptor; s 24.1 13 0.00044 33.0 -0.7 44 31-78 55-100 (239)
400 3goz_A Leucine-rich repeat-con 23.9 11 0.00039 35.9 -1.1 48 30-81 21-73 (362)
401 4fmz_A Internalin; leucine ric 22.5 14 0.00049 34.8 -0.8 40 32-77 266-305 (347)
402 4ezg_A Putative uncharacterize 22.1 15 0.0005 31.6 -0.7 42 31-76 112-153 (197)
403 1xeu_A Internalin C; cellular 21.5 31 0.0011 31.3 1.4 34 31-69 63-96 (263)
404 1e7u_A Phosphatidylinositol 3- 21.1 1E+02 0.0035 33.9 5.5 44 282-332 783-828 (961)
405 2y3a_A Phosphatidylinositol-4, 20.8 1.3E+02 0.0045 33.5 6.3 40 286-332 923-964 (1092)
406 3o53_A Protein LRIM1, AGAP0063 20.7 19 0.00064 33.6 -0.3 44 31-78 120-163 (317)
407 3hhm_A Phosphatidylinositol-4, 20.2 1.6E+02 0.0054 32.8 6.8 47 278-331 911-960 (1091)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-56 Score=437.74 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=211.0
Q ss_pred ccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+++..+.||+|+||+||+|.+.+. ....+.+|+|+..........++|.+|+.+|++++|||||+++|+|.++ +.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--~~~ 104 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD--QPL 104 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSC
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC--CEE
Confidence 455668999999999999998542 2334555555554444445568899999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
+||||||++|+|.++|..+.. ...++|..++.|+.||+.||+|||+++ ||||||||+||||+++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCC
Confidence 999999999999999965321 246899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.+||+|||+++.....+ .....+|+.|||||++.++.|+.++|||||||++|||+| |+.||.+....+....+.
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~ 261 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999999998764332 234578999999999999999999999999999999998 899998876654433322
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
. +. ....+..++.++.+|+.+||+.||++||||.||++.|+.+.
T Consensus 262 ~-------~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 N-------RQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp T-------TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred c-------CC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1 10 11224566788999999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-56 Score=437.25 Aligned_cols=262 Identities=21% Similarity=0.360 Sum_probs=214.1
Q ss_pred cccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||+|++.+.. .....+|+|+... ......++|.+|+++|++++|||||+++|+|.+. +.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC-CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC--CE
Confidence 57888899999999999999976432 2344555555432 2445567899999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRS----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
+|||||||++|+|.++|+... ....++|..++.|+.||+.||+|||+++ ||||||||+||||+.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCc
Confidence 999999999999999996532 2457999999999999999999999999 999999999999999999
Q ss_pred EEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhc
Q 011995 323 AKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 397 (473)
+||+|||+++....... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+....+...
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~ 246 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999987644332 23457899999999999999999999999999999999 89999887665543333211
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
. ....|..++.++.+|+.+||+.||++|||+.+|++.|+++.+..
T Consensus 247 ~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 247 R-----------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp C-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred C-----------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 0 01224556788999999999999999999999999999887543
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.5e-56 Score=437.41 Aligned_cols=261 Identities=20% Similarity=0.348 Sum_probs=209.0
Q ss_pred cccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||+|++.+. ......+|+|+... ......++|.+|+++|++++|||||+++|+|.+. +.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEG--RP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CE
Confidence 5677789999999999999998642 23445556665542 2445567899999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSD------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
+|||||||++|+|.++|+.... ..+++|..++.|+.||+.||+|||+++ ||||||||+||||+.+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCC
Confidence 9999999999999999975421 246999999999999999999999998 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.+||+|||+++....... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+....+.
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 274 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999987644322 34568999999999999999999999999999999999 899998876655433332
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
... +...|..++.++.+|+.+||+.||++||||.||++.|+.+.+.
T Consensus 275 ~g~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 275 QGR-----------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HTC-----------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCC-----------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 110 1122455678899999999999999999999999999988654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-56 Score=433.41 Aligned_cols=258 Identities=18% Similarity=0.340 Sum_probs=205.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|...+.||+|+||+||+|++.++ +++|+++.. ......+.|.+|+.+|++++|||||+++|++.. +.+
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~~------vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---~~~ 106 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHGD------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNL 106 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSSE------EEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCc------EEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---CeE
Confidence 4567779999999999999986542 355555433 344556789999999999999999999999854 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|||||||++|+|.++|+.. ...++|..+..|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+|+.
T Consensus 107 ~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred EEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 9999999999999999643 356999999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC----CccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 334 IPET----DISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 334 ~~~~----~~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
.... .....+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+.............
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~--------- 252 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR--------- 252 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT---------
T ss_pred cccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc---------
Confidence 6432 2345589999999999964 35899999999999999999999999876544332211100
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
....+.+ ...+..++.++.+|+.+||+.||++||||.||++.|+.+...
T Consensus 253 --~~~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 253 --GYASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp --TCCCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred --CCCCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 0011111 123456678899999999999999999999999999988643
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-55 Score=436.25 Aligned_cols=249 Identities=19% Similarity=0.303 Sum_probs=210.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
..|+..+.||+|+||+||+|+... +++.+|+|++.... ....+.+.+|+.+|+.++|||||++++++.++ +.+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~ 147 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELW 147 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--TEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECC---CCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CEEE
Confidence 458889999999999999999544 45667777776543 23456789999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.+
T Consensus 148 ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 220 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220 (346)
T ss_dssp EEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceec
Confidence 99999999999999954 35999999999999999999999999 999999999999999999999999999877
Q ss_pred CCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
... .....+||+.|||||++.+..|+.++|||||||++|||++|++||.+....+....+....+
T Consensus 221 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~------------- 287 (346)
T 4fih_A 221 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP------------- 287 (346)
T ss_dssp CSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-------------
T ss_pred CCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-------------
Confidence 543 34567899999999999999999999999999999999999999988776555443322110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+. ...+..++.++.+||.+||++||++|||+.|+++.
T Consensus 288 ~~--~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 288 PR--LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CC--CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC--CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01 11234567899999999999999999999999874
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.4e-55 Score=442.53 Aligned_cols=249 Identities=19% Similarity=0.315 Sum_probs=211.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+.|+..+.||+|+||.||+|+... +++.+|+|++.... ....+.+.+|+.+|+.++|||||++++++.++ +.+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~ 224 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELW 224 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--TEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECC---CCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC--CEEE
Confidence 459999999999999999999544 45667777776543 33456789999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.+
T Consensus 225 iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~ 297 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297 (423)
T ss_dssp EEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceEC
Confidence 99999999999999953 35999999999999999999999999 999999999999999999999999999876
Q ss_pred CCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
... .....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.........+....+
T Consensus 298 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~------------- 364 (423)
T 4fie_A 298 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP------------- 364 (423)
T ss_dssp CSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-------------
T ss_pred CCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-------------
Confidence 543 34567899999999999999999999999999999999999999988776655444322111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.+ ..+..++.++.+||.+||++||++|||+.|+|+.
T Consensus 365 ~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 365 PRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCC--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 1133567889999999999999999999999874
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.6e-55 Score=436.00 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=206.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|++.+.||+|+||+||+|+... +++.+|+|++.... .....+.+.+|+.+|++++|||||++++++.++ +.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~--~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTE---DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN--GS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETT---TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred ccceEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC--CE
Confidence 3689999999999999999998543 45677788776543 344567899999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||||||++|+|.++|..+ ....+++..++.|+.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEES
T ss_pred EEEEEeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccce
Confidence 99999999999999999654 3456899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.+.... ....+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+..+....+....
T Consensus 174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~------------ 241 (350)
T 4b9d_A 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS------------ 241 (350)
T ss_dssp CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC------------
T ss_pred eecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC------------
Confidence 775432 234579999999999999999999999999999999999999998876655443332110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ...+..++.++.+||.+||++||++|||+.|+++.
T Consensus 242 ----~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 ----F-PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ----C-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----C-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 01234566889999999999999999999999863
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.1e-55 Score=435.70 Aligned_cols=266 Identities=20% Similarity=0.301 Sum_probs=217.7
Q ss_pred HHhcccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC-CCcccceeeeecC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH-PNLCKLLGFHARD 248 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~ 248 (473)
.-.++|+..+.||+|+||.||+|.+.+. ..+.+.+++|+..........+.|.+|+++|.++.| ||||+++|+|...
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 3457899999999999999999987543 345667777766554455556789999999999965 8999999998764
Q ss_pred CCCceEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
+ +.+|||||||++|+|.++|+... ....++|..+..++.||+.||+|||+++ ||||||||+||
T Consensus 141 ~-~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NI 216 (353)
T 4ase_A 141 G-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNI 216 (353)
T ss_dssp T-SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred C-CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccce
Confidence 3 57899999999999999996532 1345899999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
||+.++.+||+|||+|+.+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987654322 34467899999999999999999999999999999998 9999987653332
Q ss_pred H-hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 391 R-NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 391 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
. ..+. .+ .+...|..++.++.+|+.+||+.||++|||+.||++.|+++.+.
T Consensus 297 ~~~~i~-------~g----------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 297 FCRRLK-------EG----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHH-------HT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-------cC----------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1 1111 11 11123455678899999999999999999999999999998654
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8e-56 Score=431.21 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=209.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||+||+|+... +++.+|+|++.... .....+.+.+|+++|++++|||||++++++.++ +.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD--EK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SE
T ss_pred cccEEEEEEecccCeEEEEEEECC---CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--CE
Confidence 579999999999999999998544 45677777765321 233457789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||||||++|+|.++|... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+
T Consensus 107 ~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 99999999999999999543 46999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC----CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPET----DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
.+... ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+....+....
T Consensus 181 ~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~---------- 250 (311)
T 4aw0_A 181 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE---------- 250 (311)
T ss_dssp ECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred ecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Confidence 76432 2345689999999999999999999999999999999999999998876655443332111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 449 (473)
..++..++.++.+||.+||++||++|||++|++
T Consensus 251 --------~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 --------YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --------CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --------CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 123445678899999999999999999999874
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4e-55 Score=431.17 Aligned_cols=255 Identities=18% Similarity=0.175 Sum_probs=208.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+.|...++||+|+||.||+|+... +++.+|+|+++.. ..+.+|+.+|+.++|||||++++++.++ +.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~---~g~~vAiK~i~~~------~~~~~E~~il~~l~HpnIV~l~~~~~~~--~~~ 125 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQ---TGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAVREG--PWV 125 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETT------TCCTHHHHTTTTCCCTTBCCEEEEEEET--TEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECC---CCCEEEEEEECHH------HhHHHHHHHHHhCCCCCCCcEEEEEEEC--CEE
Confidence 3578888999999999999999544 4566777777643 2235799999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccCCCc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGCAG 332 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGla~ 332 (473)
|||||||+||+|.++|... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+| .+||+|||+|+
T Consensus 126 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence 9999999999999999643 46999999999999999999999999 99999999999999987 59999999998
Q ss_pred ccCCCC-------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 333 HIPETD-------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 333 ~~~~~~-------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
.+.... ....+||+.|||||++.+..|+.++|||||||++|||+||++||.+.........+....+
T Consensus 200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~------ 273 (336)
T 4g3f_A 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP------ 273 (336)
T ss_dssp EC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC------
T ss_pred EccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC------
Confidence 764332 1234799999999999999999999999999999999999999987654433222211110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
....++..++.++.+||.+||++||.+|||+.||++.|.+......
T Consensus 274 ---------~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 274 ---------PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ---------GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---------CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 0012345667899999999999999999999999999987765443
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-55 Score=421.98 Aligned_cols=249 Identities=18% Similarity=0.227 Sum_probs=200.0
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecC--CCCceE
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQRM 254 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~~~ 254 (473)
...+.||+|+||+||+|.+... ...+++|+..... .....+.|.+|+++|++++|||||++++++.+. +...+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~---~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTET---TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCC---CeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence 5567899999999999996543 3455666554332 344567799999999999999999999998652 235689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla~~ 333 (473)
||||||++|+|.++|.. ...+++..+..|+.||+.||+|||++++ +||||||||+||||+ .++.+||+|||+|+.
T Consensus 106 lvmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 99999999999999964 3469999999999999999999999873 499999999999997 479999999999987
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhcccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.........+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+....... ..+...
T Consensus 182 ~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~--------------- 245 (290)
T 3fpq_A 182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG--------------- 245 (290)
T ss_dssp CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT---------------
T ss_pred CCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC---------------
Confidence 66655667789999999998865 6999999999999999999999999765443321 111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....++...+.++.+||.+||++||++|||+.|+++
T Consensus 246 -~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 -VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001112334568999999999999999999999986
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.8e-54 Score=411.03 Aligned_cols=247 Identities=17% Similarity=0.256 Sum_probs=193.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||+||+|.. ..+++.+|+|+..... .......+.+|+++|+.++|||||++++++.++ +.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~---~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYH---TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK--DE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEEC---TTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred eCeEEEEEEecCcCeEEEEEEE---CCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CE
Confidence 6899999999999999999984 3455677777765432 334456799999999999999999999999876 88
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+||||||+ +|+|.+++..+ ..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~ 160 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-
T ss_pred EEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCe
Confidence 99999999 68999998643 46999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ..+.+||+.|||||++.+..+ +.++|||||||++|||+||+.||.+.........+....
T Consensus 161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~------------ 228 (275)
T 3hyh_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------------ 228 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------------
T ss_pred ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC------------
Confidence 765443 345689999999999988876 589999999999999999999998766554333332111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++..++.++.+|+.+||+.||++|||++|+++.
T Consensus 229 ------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11244566889999999999999999999999873
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-54 Score=421.46 Aligned_cols=250 Identities=17% Similarity=0.220 Sum_probs=202.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|++.+.||+|+||+||+|+...+..+.+.+|+|+..... .......+.+|+++|++++|||||++++++.++ +.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE--GKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET--TEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEE
Confidence 57999999999999999999875555556677777765332 222345688999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|||||||+||+|.++|... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999999643 46999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
.... ...+.+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..+....+....
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~------------- 242 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK------------- 242 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-------------
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC-------------
Confidence 5332 3456689999999999999999999999999999999999999999877655444332111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFE 450 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~ 450 (473)
..++..++.++.+||.+||++||++|||+ +|+++
T Consensus 243 -----~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 -----LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -----CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12344567889999999999999999984 56664
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.6e-53 Score=414.62 Aligned_cols=273 Identities=16% Similarity=0.207 Sum_probs=196.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--Cc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--DQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~--~~ 252 (473)
.+|...+.||+|+||+||+|++.+ ..+|+|+. .........+..|+..+.+++|||||+++|+|.+++. ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g-----~~VAvK~l--~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~ 75 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRG-----EEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETT-----EEEEEEEE--CGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECC-----EEEEEEEE--CccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence 467788999999999999999753 34455544 3222222233456666678899999999999986532 25
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCceeecCCCCCceeeCCCCcEEEec
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-----PFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-----~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
+|||||||++|+|.++|+.. .++|..+.+++.|++.||+|||+++ .++||||||||+||||+.++.+||+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 79999999999999999643 5999999999999999999999871 22399999999999999999999999
Q ss_pred cCCCcccCCCC------ccCcccccccCChhhhhcC------CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 328 YGCAGHIPETD------ISNSSVAAANLSVETLERG------LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 328 FGla~~~~~~~------~~~~~~t~~y~aPE~~~~~------~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
||+++...... .....||+.|||||++.+. .++.++|||||||++|||+||.+||.......... ..
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~-~~ 230 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY-YD 230 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT-TT
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc-hh
Confidence 99998764332 1234789999999999764 36779999999999999999988775432211000 00
Q ss_pred hc--ccccccc--cccccccccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 396 WS--RPFLADD--CRLSLIMDPQLKGRF-PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 396 ~~--~~~~~~~--~~~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
+. .+..... .......++.+...+ ...+...+.+|+.+||+.||++||||.||++.|+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 00 0000000 000011122222111 2356778999999999999999999999999999987654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.9e-52 Score=405.16 Aligned_cols=252 Identities=18% Similarity=0.267 Sum_probs=192.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~--- 250 (473)
.++|+..+.||+|+||+||+|+... +++.+|+|++.........+.+.+|+.+|++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETT---TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence 3579999999999999999998543 3466778877766555566789999999999999999999999875431
Q ss_pred -------CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 251 -------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 251 -------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
..+|||||||++|+|.+++.........++..++.|+.||+.||+|||+++ ||||||||+||||+.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcE
Confidence 247999999999999999976544445677888999999999999999999 9999999999999999999
Q ss_pred EEeccCCCcccCCCC--------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH
Q 011995 324 KLSGYGCAGHIPETD--------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389 (473)
Q Consensus 324 kl~DFGla~~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~ 389 (473)
||+|||+|+.+.... ....+||+.|||||++.+..|+.++|||||||++|||++ ||.... +
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~ 232 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--E 232 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--H
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--H
Confidence 999999998764332 123479999999999999999999999999999999996 775421 1
Q ss_pred HHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 390 ERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....+... .+.... ......++.+.+||.+||+.||.+|||+.|+++
T Consensus 233 ~~~~~~~~-------------~~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRTLTDV-------------RNLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHH-------------HTTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH-------------hcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111100 000000 012234466789999999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-50 Score=406.70 Aligned_cols=268 Identities=14% Similarity=0.182 Sum_probs=206.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecC----
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD---- 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~---- 248 (473)
.++|++.+.||+|+||+||+|+... +++.+|+|++.... .....+.+.+|+++|+.++|||||++++++...
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRL---TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT
T ss_pred CCCeEEEEEEecccCeEEEEEEECC---CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccc
Confidence 3579999999999999999999543 45667777765433 233456789999999999999999999987642
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
..+.+|||||||+ |+|.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+||
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCC
T ss_pred cCCEEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeec
Confidence 2367899999995 689999953 457999999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCC------CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 329 GCAGHIPET------DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 329 Gla~~~~~~------~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
|+|+.+... ...+.+||+.|||||++.+. .++.++||||+||++|||++|++||.+.+..+....+.......
T Consensus 203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p 282 (398)
T 4b99_A 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282 (398)
T ss_dssp TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999876322 23456899999999998875 46999999999999999999999999887766655443211100
Q ss_pred cccc-------ccccc---cccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDC-------RLSLI---MDPQLKGR---FPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~-------~~~~~---~~~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.... ..... ..+..... .....+.++.+||.+||++||.+|||+.|+|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 00000 00000000 012346789999999999999999999999873
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.4e-49 Score=393.15 Aligned_cols=265 Identities=16% Similarity=0.172 Sum_probs=199.1
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
...+.|++.+.||+|+||+||+|+...+..+.+.+|+|+.... ....++.+|+++|..+ +|||||++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~-- 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN-- 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET--
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC--
Confidence 4567899999999999999999986544445667777655432 2345688999999998 699999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYG 329 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFG 329 (473)
+.+|||||||++|+|.+++. .+++..+..++.||+.||+|||+++ ||||||||+|||++.+ +.+||+|||
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 89999999999999999982 3899999999999999999999999 9999999999999877 899999999
Q ss_pred CCcccCCC------------------------------CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcC
Q 011995 330 CAGHIPET------------------------------DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTG 378 (473)
Q Consensus 330 la~~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG 378 (473)
+|+..... .....+||++|||||++.+. .|+.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 99754322 12344799999999999775 489999999999999999999
Q ss_pred CCCCCCCCh-HHHHhHhhh----------cccccc----cc----ccccc---------cccccc---------CCCCCH
Q 011995 379 RKNLDSRHP-KEERNLVKW----------SRPFLA----DD----CRLSL---------IMDPQL---------KGRFPL 421 (473)
Q Consensus 379 ~~p~~~~~~-~~~~~~~~~----------~~~~~~----~~----~~~~~---------~~~~~l---------~~~~~~ 421 (473)
+.||..... .+....+.. ...+.. .. ..... ...+.+ ......
T Consensus 244 ~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 244 RYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 999965443 222221110 000000 00 00000 000000 001122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 422 KAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 422 ~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.++.++.+|+.+||+.||.+|+|++|+|+
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 45678999999999999999999999986
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.6e-49 Score=414.02 Aligned_cols=251 Identities=17% Similarity=0.207 Sum_probs=203.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhH---hHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVK---EFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
.++|++.+.||+|+||.||+|+... +++.+|+|++.... ...... ....++.+++.++|||||++++++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~---tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred hHHeEEEEEEecccCeEEEEEEECC---CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence 3789999999999999999999544 45677777765321 111222 233456777888999999999999876
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
+.+|||||||+||+|.++|... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+||
T Consensus 265 --~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 265 --DKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEeccc
Confidence 8999999999999999999643 46999999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
|+|+.+......+.+||+.|||||++.+ ..|+.++|||||||++|||++|++||.+........+....
T Consensus 337 GlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i---------- 406 (689)
T 3v5w_A 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---------- 406 (689)
T ss_dssp TTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH----------
T ss_pred ceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh----------
Confidence 9999887777777899999999999965 57999999999999999999999999764322221111110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~ 450 (473)
.. ....++..++.++.+||.+||++||.+|++ ++||++
T Consensus 407 ---~~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 407 ---LT--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---HH--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---cC--CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 00 011235567789999999999999999998 677765
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-48 Score=410.24 Aligned_cols=253 Identities=19% Similarity=0.254 Sum_probs=210.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|++.+.||+|+||.||+|.... +++.+|+|++... .....+.+.+|+.+|+.++|||||++++++.++ +.+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~---tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~ 229 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--NEM 229 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS--SEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEecc-chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CEE
Confidence 4789999999999999999999554 4456677766543 233456789999999999999999999999876 899
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC--CcEEEeccCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD--FSAKLSGYGCA 331 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--~~vkl~DFGla 331 (473)
|||||||+||+|.++|.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||++
T Consensus 230 ~iv~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a 304 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT 304 (573)
T ss_dssp EEEEECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSC
T ss_pred EEEEeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccce
Confidence 999999999999999953 2346999999999999999999999999 9999999999999854 89999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
+.+.... ....+||+.|||||++.+..|+.++|||||||++|||++|.+||.+....+....+.....
T Consensus 305 ~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~----------- 373 (573)
T 3uto_A 305 AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW----------- 373 (573)
T ss_dssp EECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-----------
T ss_pred eEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC-----------
Confidence 8875443 3456899999999999999999999999999999999999999998776665444432111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.......++.++.+||.+||+.||.+|||+.|+|++
T Consensus 374 ---~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 374 ---NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01111123456889999999999999999999999873
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.3e-47 Score=373.89 Aligned_cols=283 Identities=29% Similarity=0.527 Sum_probs=230.0
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
+++.++...+++|...+.||+|+||.||+|.+.++ ..+++|+... ......+.+.+|+.+++.++||||++++++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 103 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG----AKVALKRRTP-ESSQGIEEFETEIETLSFCRHPHLVSLIGF 103 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTC----CEEEEEECCS-CCSSHHHHHHHHHHGGGSCCCTTBCCEEEE
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCC----CEEEEEEecc-cChHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 45556667789999999999999999999986432 3444444332 234456789999999999999999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
+... +..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+
T Consensus 104 ~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 104 CDER--NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178 (321)
T ss_dssp CCCT--TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCE
T ss_pred EcCC--CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCE
Confidence 8765 789999999999999999965322 346999999999999999999999999 9999999999999999999
Q ss_pred EEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 324 KLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 324 kl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
||+|||++....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.............|...
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 258 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH
T ss_pred EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh
Confidence 999999997653221 2234578999999999999999999999999999999999999987655444444444322
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.. ....+..+.++.+...++...+..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 259 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 259 SH-NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HH-TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cc-ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 21 12234455666666677889999999999999999999999999999999987654
No 21
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=370.34 Aligned_cols=268 Identities=18% Similarity=0.326 Sum_probs=216.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|.+.+.||+|+||.||+|.+..+......+++|+..........+.+.+|+.+++.++||||+++++++.+. +..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG--RLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG--GCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--Ccc
Confidence 467889999999999999999986655555556677666544555667899999999999999999999999765 788
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 9999999999999999543 346999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||...........+...
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---------- 270 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG---------- 270 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT----------
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC----------
Confidence 643321 22244678999999999999999999999999999999 99999877655443322211
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCccc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSSTV 465 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~~~ 465 (473)
.....+..++..+.+|+.+||..||.+|||+.+|++.|+.+.....+....
T Consensus 271 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~~ 321 (325)
T 3kul_A 271 -------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRAT 321 (325)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-----
T ss_pred -------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccccc
Confidence 011123456688999999999999999999999999999998766654443
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-46 Score=370.19 Aligned_cols=293 Identities=27% Similarity=0.509 Sum_probs=232.2
Q ss_pred CCCCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCc
Q 011995 159 TGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238 (473)
Q Consensus 159 ~~~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnI 238 (473)
.+....+++.++....++|...+.||+|+||.||+|...+ ...+++|+............+.+|++++..++||||
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD----GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSS----SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecC----CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 3456679999999999999999999999999999997543 334455554433333344578999999999999999
Q ss_pred ccceeeeecCCCCceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee
Q 011995 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI 317 (473)
Q Consensus 239 v~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl 317 (473)
+++++++... ...++||||+++|+|.+++.... ....+++..+..++.|++.||.|||++..++|+||||||+|||+
T Consensus 90 v~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 90 LRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp CCCCEEECCS--SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred cceEEEEecC--CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 9999999766 77899999999999999997643 23469999999999999999999999911129999999999999
Q ss_pred CCCCcEEEeccCCCcccCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh--HHHHh
Q 011995 318 DKDFSAKLSGYGCAGHIPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP--KEERN 392 (473)
Q Consensus 318 ~~~~~vkl~DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~--~~~~~ 392 (473)
+.++.+||+|||++....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence 999999999999998764332 2334589999999999998899999999999999999999999963211 11111
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...|...... ......+.+..+...++...+..+.+++.+||+.||.+|||+.+|++.|+...-.
T Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 248 LLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp HHHHHTTTTS-SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HHHHHHHHhh-chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 2233332222 2244556666677778889999999999999999999999999999999975443
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.9e-46 Score=375.38 Aligned_cols=263 Identities=19% Similarity=0.341 Sum_probs=214.2
Q ss_pred hcccccCcceeecCCceEEEEEECC----CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
.++|...+.||+|+||.||+|.+.. .......+++|+............+.+|+.+|+.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 4689999999999999999998632 22344555666554443445567899999999999 899999999999765
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
+.+|+||||+++|+|.+++..... ...+++..+..++.||+.||+|||+++ |+||||||+||
T Consensus 160 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NI 234 (370)
T 2psq_A 160 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNV 234 (370)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGE
T ss_pred --CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhE
Confidence 789999999999999999975421 245899999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
||+.++.+||+|||+++...... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 99999999999999998664332 223356788999999999999999999999999999999 9999987654443
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+... .....+..++.++.+++.+||+.||.+|||+.||++.|+++...
T Consensus 315 ~~~~~~~-----------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 315 FKLLKEG-----------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHTT-----------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcC-----------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 3222111 01122445668899999999999999999999999999998653
No 24
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.1e-46 Score=372.18 Aligned_cols=275 Identities=19% Similarity=0.290 Sum_probs=221.4
Q ss_pred CCCHHHHHHHhcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCccc
Q 011995 164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCK 240 (473)
Q Consensus 164 ~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~ 240 (473)
.+...+.....++|...+.||+|+||.||+|.+.+ +....+.+++|+..........+.+.+|++++.++ +|||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 35566666678899999999999999999998654 44566777777776554555567899999999999 8999999
Q ss_pred ceeeeecCCCCceEEEEEeccCCChhhhhhcCCC----------------------------------------------
Q 011995 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD---------------------------------------------- 274 (473)
Q Consensus 241 l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------- 274 (473)
+++++...+ ...++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~-~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 91 LLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp EEEEECSTT-SCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeecCC-CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 999987653 568999999999999999975432
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 275 -----------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 275 -----------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 122899999999999999999999999 999999999999999999999999999866432
Q ss_pred C----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 338 D----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 338 ~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
. .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+............ .
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~------~--------- 311 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------E--------- 311 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH------H---------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH------c---------
Confidence 2 233466789999999999999999999999999999998 9999987653332111100 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
......+..++.++.+++.+||+.||.+|||+.+|++.|+++.+.
T Consensus 312 -~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 312 -GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 001112344567899999999999999999999999999988753
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-45 Score=361.59 Aligned_cols=264 Identities=22% Similarity=0.348 Sum_probs=206.4
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|++.+.||+|+||+||+|...+ ..+++|+..... .......+.+|++++++++||||+++++++...
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWHG-----SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-- 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT-----EEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST--
T ss_pred CChhHceeeeEeecCCCeEEEEEEECC-----CcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--
Confidence 345789999999999999999998643 334556554433 334456789999999999999999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||||+++|+|.+++........+++..+..++.||+.||+|||++++ +|+||||||+|||++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSS-CCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CEECCCCChhhEEEeCCCcEEECCCCC
Confidence 6789999999999999999654323348999999999999999999999873 399999999999999999999999999
Q ss_pred CcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------- 255 (309)
T 3p86_A 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC---------- 255 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC----------
T ss_pred CccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC----------
Confidence 97654332 234578999999999999999999999999999999999999998876555433322111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....++..++..+.+||.+||+.||.+|||+.+|++.|+.+.+..
T Consensus 256 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 256 ------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 011224456688999999999999999999999999999987654
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=362.59 Aligned_cols=261 Identities=18% Similarity=0.298 Sum_probs=209.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||+||+|....+. +.+++|+.. .......+.+.+|++++..++||||+++++++.++ ...
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~---~~va~K~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~ 82 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETG---EVMVMKELI-RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD--KRL 82 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTC---CEEEEEEES-CCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCC---cEEEEEEec-cCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC--Cee
Confidence 467889999999999999999975533 344444432 23455667899999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 83 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 157 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARL 157 (310)
T ss_dssp EEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeeccccee
Confidence 9999999999999999653 456999999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCc----------------cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 334 IPETDI----------------SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 334 ~~~~~~----------------~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
...... ....+|+.|+|||.+.+..++.++|||||||++|||++|..||............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--- 234 (310)
T 3s95_A 158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--- 234 (310)
T ss_dssp CC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB---
T ss_pred cccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh---
Confidence 643221 1456899999999999999999999999999999999999998754322110000
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
......+ ..++..++..+.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 235 --------~~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 235 --------NVRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp --------CHHHHHH----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --------hhhcccc----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0000011 11233455778999999999999999999999999998876543
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.9e-45 Score=355.65 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=206.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||+||+|.... ..+.+++|+..... ....+.+.+|+.+++.++||||+++++++... +..
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~ 92 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVG--DEL 92 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTT---TCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECC---CCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC--CEE
Confidence 3679999999999999999998433 34556666655432 23356788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (297)
T 3fxz_A 93 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (297)
T ss_dssp EEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999999999999999543 4899999999999999999999999 99999999999999999999999999877
Q ss_pred cCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..... .....+|+.|+|||.+.+..++.++|||||||++|||++|..||...........+....
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~------------- 232 (297)
T 3fxz_A 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG------------- 232 (297)
T ss_dssp CCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-------------
T ss_pred cCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-------------
Confidence 64332 344578999999999999999999999999999999999999998776544333221110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+..++..+.+|+.+||+.||.+|||+.|+++.
T Consensus 233 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 233 --TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp --SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00011234566889999999999999999999999873
No 28
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-45 Score=358.32 Aligned_cols=282 Identities=16% Similarity=0.217 Sum_probs=216.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||+||+|....+ .+.+++|+..........+.+.+|++++++++||||+++++++........
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKT---GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCC---CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 35799999999999999999996543 345566665543333446778899999999999999999999987655688
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----CCCCcEEEeccC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI----DKDFSAKLSGYG 329 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~vkl~DFG 329 (473)
++||||+++|+|.+++........+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 999999999999999976544455999999999999999999999999 9999999999999 788889999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhh--------cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhH---hhh
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLE--------RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNL---VKW 396 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~--------~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~---~~~ 396 (473)
++....... .....+|+.|+|||++. +..++.++|||||||++|||++|+.||........ ... +..
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred CceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 998765443 34557899999999986 46789999999999999999999999965432211 111 110
Q ss_pred cccc-----ccc--ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 397 SRPF-----LAD--DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 397 ~~~~-----~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
..+. ... ...+....+......+....+..+.+|+.+||+.||++|||+.|+++...+...++++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~~ 313 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNS 313 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC----
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCCc
Confidence 0000 000 0000000011122245678899999999999999999999999999999987766654
No 29
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.4e-45 Score=368.87 Aligned_cols=263 Identities=19% Similarity=0.339 Sum_probs=203.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|++.........+++|+..........+.|.+|+.++.+++||||+++++++... +..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--Cce
Confidence 357999999999999999999865333344555666655444455567899999999999999999999999765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999643 456999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...........+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~---------- 266 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---------- 266 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT----------
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----------
Confidence 643321 12234678999999999999999999999999999998 99999876654433322111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.....+..++..+.+++.+||+.||.+||++.+|++.|+++.....
T Consensus 267 -------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 267 -------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp -------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred -------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011133456789999999999999999999999999999875543
No 30
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-44 Score=353.64 Aligned_cols=283 Identities=26% Similarity=0.437 Sum_probs=223.1
Q ss_pred CCcCCCHHHHHHHhcccccC------cceeecCCceEEEEEECCCCeeeeEEEEEEEecC---CCChhhHhHHHHHHHHH
Q 011995 161 TLRNFPLDEVAAACHNFFSD------RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLA 231 (473)
Q Consensus 161 ~~~~~~~~el~~~~~~f~~~------~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Ei~~l~ 231 (473)
....|++.++..++++|... +.||+|+||.||+|...+ ..+++|+.... ......+.+.+|+.+++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~ 85 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-----TTVAVKKLAAMVDITTEELKQQFDQEIKVMA 85 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSS-----CEEEEEEECCCTTSCTTTHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECC-----ceEEEEEEecccCcchHHHHHHHHHHHHHHH
Confidence 45669999999999999877 899999999999998533 33445544332 12344677999999999
Q ss_pred hCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCC
Q 011995 232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311 (473)
Q Consensus 232 ~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 311 (473)
.++||||+++++++... +..++||||+++|+|.+++........+++..+..++.|++.||.|||+++ |+|||||
T Consensus 86 ~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlk 160 (307)
T 2nru_A 86 KCQHENLVELLGFSSDG--DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIK 160 (307)
T ss_dssp HCCCTTBCCEEEEECSS--SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred hcCCCCeEEEEEEEecC--CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCC
Confidence 99999999999999765 789999999999999999975444567999999999999999999999999 9999999
Q ss_pred CCceeeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh
Q 011995 312 TANIQIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387 (473)
Q Consensus 312 p~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~ 387 (473)
|+|||++.++.+||+|||++....... .....+++.|+|||.+.+ .++.++|||||||++|||++|..||.....
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 999999999999999999987654321 233467899999998865 589999999999999999999999976543
Q ss_pred HHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 388 KEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
......+. .........+....+..+ ...+...+..+.+++.+||+.||.+|||+.+|++.|+++..
T Consensus 240 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 240 PQLLLDIK--EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SSBTTHHH--HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hHHHHHHH--HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22111110 000011111222233322 23467788999999999999999999999999999998753
No 31
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=365.59 Aligned_cols=250 Identities=15% Similarity=0.223 Sum_probs=200.6
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|+..+.||+|+||+||+|.... +++.+++|+............+.+|+++|+.++||||+++++++... +.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHIL---TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA--NK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS--SE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECC---CCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--CE
Confidence 46789999999999999999998543 34566777766554444566789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~ 156 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCA 156 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcc
Confidence 99999999999999999543 35999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPET---DISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
..... ......+|+.|+|||++.+..+ +.++|||||||++|||++|..||.+.........+....
T Consensus 157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---------- 226 (347)
T 3zgw_A 157 KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK---------- 226 (347)
T ss_dssp C--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred cccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC----------
Confidence 65432 2345578999999999988775 899999999999999999999998876554433332111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 227 --------~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 --------YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --------CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 01233456788999999999999999999999974
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-45 Score=362.92 Aligned_cols=249 Identities=18% Similarity=0.294 Sum_probs=208.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|.... +++.+++|+..... .....+.+.+|+.+|+.++||||+++++++... +.
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHIL---TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE--KT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--CE
Confidence 5689999999999999999998543 34556666665432 334567789999999999999999999999776 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred EEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 99999999999999999543 45999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC-CccCcccccccCChhhhhcCCCC-CcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET-DISNSSVAAANLSVETLERGLLT-PKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~s-~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ......+|+.|+|||++.+..+. .++|||||||++|||++|+.||.+.........+....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------ 230 (328)
T 3fe3_A 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK------------ 230 (328)
T ss_dssp GGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------------
T ss_pred ecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 66443 33456889999999999888765 78999999999999999999998876655443332111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++...+.++.+|+.+||..||.+|||+.|+++.
T Consensus 231 ------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01234456789999999999999999999999874
No 33
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-45 Score=365.08 Aligned_cols=272 Identities=15% Similarity=0.205 Sum_probs=204.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC--CC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--SD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~ 251 (473)
.++|+..+.||+|+||+||+|.+.+ +.+++|+.. ........+.+|+.++.+++|||||++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~vavK~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLN-----EYVAVKIFP--IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETT-----EEEEEEEEC--GGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred hhhchhhheecccCceEEEEEEECC-----CEEEEEEee--cCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence 4689999999999999999998653 344555543 23344456677999999999999999999988653 23
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc----------CCCceeecCCCCCceeeCCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE----------GPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~----------~~~~ivHrDlkp~NILl~~~~ 321 (473)
.+++||||+++|+|.+++... .+++..+..++.|++.||.|||+. + |+||||||+|||++.++
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~ 168 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNL 168 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTC
T ss_pred eEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCC
Confidence 479999999999999999543 499999999999999999999998 8 99999999999999999
Q ss_pred cEEEeccCCCcccCCCC----ccCcccccccCChhhhhcC-----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 322 SAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERG-----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~-----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
.+||+|||+++...... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+........
T Consensus 169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~ 248 (322)
T 3soc_A 169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248 (322)
T ss_dssp CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence 99999999997664332 2335789999999999763 35668899999999999999999997654321111
Q ss_pred Hhhhcccccccccc----cccccccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 393 LVKWSRPFLADDCR----LSLIMDPQLKGRF-PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 393 ~~~~~~~~~~~~~~----~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
.............. ......+.+...+ ....+.++.+|+.+||+.||++|||+.+|++.|+++....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11000000000000 0001111111111 2356678999999999999999999999999999987654
No 34
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-44 Score=347.47 Aligned_cols=255 Identities=18% Similarity=0.330 Sum_probs=209.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|...++. .+++|+. .......+.+.+|++++++++||||+++++++.+. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~vavK~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~ 80 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKD----KVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--API 80 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTE----EEEEEEE--CTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSE
T ss_pred hhhceeeheecCCCccEEEEEEecCCC----eEEEEEe--cccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecC--Cce
Confidence 357888999999999999999975432 3444444 33444557899999999999999999999999765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccc
Confidence 9999999999999999543 346899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+...
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~------------ 223 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG------------ 223 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT------------
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC------------
Confidence 64432 233455678999999999999999999999999999999 99999876655433322211
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.....+...+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus 224 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 224 -----FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00111333467899999999999999999999999999998764
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-44 Score=363.35 Aligned_cols=266 Identities=21% Similarity=0.353 Sum_probs=218.0
Q ss_pred hcccccCcceeecCCceEEEEEECC----CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
.++|.+.+.||+|+||.||+|.... .......+++|+............+.+|++++..+ +|||||++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4689999999999999999998632 22344566666665554555668899999999999 999999999999766
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+||
T Consensus 148 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 222 (382)
T 3tt0_A 148 --GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV 222 (382)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGE
T ss_pred --CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceE
Confidence 789999999999999999975431 246999999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
||+.++.+||+|||++....... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998764432 233456789999999999999999999999999999999 9999987765543
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
...+.... ....+..++.++.+|+.+||+.||.+|||+.+|++.|+++....+.
T Consensus 303 ~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 303 FKLLKEGH-----------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHHHHTTC-----------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHcCC-----------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 33222110 1112334567899999999999999999999999999998765543
No 36
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6e-45 Score=352.29 Aligned_cols=260 Identities=18% Similarity=0.314 Sum_probs=202.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|....+......+++++..........+.+.+|+.+++.++||||+++++++.+ +..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---SSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc---Ccc
Confidence 46899999999999999999997655444455555555443444556789999999999999999999999843 578
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccc
Confidence 9999999999999999643 346899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~----------- 234 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----------- 234 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-----------
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC-----------
Confidence 644321 22345678999999999999999999999999999996 999998765544332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...++..++..+.+++.+||..||.+|||+.++++.|+++...
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 235 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0112345568899999999999999999999999999988653
No 37
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-45 Score=358.17 Aligned_cols=279 Identities=19% Similarity=0.255 Sum_probs=209.2
Q ss_pred hcccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||+||+|++.. +....+.+++|+... ......+.+.+|++++.+++||||+++++++...+...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 4678999999999999999998642 233455666665542 23445578999999999999999999999987654467
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 89999999999999999653 335899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... .....++..|+|||.+.+..++.++|||||||++|||++|..||.................... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI-VFHL 241 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHH-HHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchh-HHHH
Confidence 764332 1223456779999999999999999999999999999999999865322111100000000000 0000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
............+..++.++.+|+.+||+.||.+|||+.+|++.|+++..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0011111122234566789999999999999999999999999999987653
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.4e-44 Score=354.23 Aligned_cols=261 Identities=20% Similarity=0.307 Sum_probs=212.9
Q ss_pred cCCCHHHHHHHhcc----------cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh
Q 011995 163 RNFPLDEVAAACHN----------FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS 232 (473)
Q Consensus 163 ~~~~~~el~~~~~~----------f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~ 232 (473)
..++++++..+++. |...+.||+|+||.||+|....+ ++.+++|+.... .....+.+.+|+.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~---g~~vavK~~~~~-~~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHS---GRQVAVKMMDLR-KQQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEETT-TCCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCC---CcEEEEEEEecc-chhHHHHHHHHHHHHHh
Confidence 34889999988864 66778999999999999986533 345566665543 23445778999999999
Q ss_pred CCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 233 l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
++||||+++++++... +..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||
T Consensus 99 l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp 169 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVG--EELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKS 169 (321)
T ss_dssp CCCTTBCCEEEEEEET--TEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred CCCCCcceEEEEEEEC--CEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCH
Confidence 9999999999999876 789999999999999999843 35999999999999999999999999 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE 390 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~ 390 (473)
+|||++.++.+||+|||++...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999999998776443 23445789999999999999999999999999999999999999987665443
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.... .+.+ ......+..+.+++.+||+.||.+|||+.++++.
T Consensus 250 ~~~~~~~~-------------~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDSP-------------PPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHSS-------------CCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcCC-------------CCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 32221110 0011 1123456789999999999999999999999874
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.1e-45 Score=370.98 Aligned_cols=259 Identities=19% Similarity=0.338 Sum_probs=211.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|.+..+. ..+++|+............|.+|+.+|+.++|||||++++++... +..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADN---TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTC---CEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS--SSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCC---eEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC--CCc
Confidence 457888899999999999999976432 344555544333344456799999999999999999999999765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... +..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 188 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 9999999999999999642 345899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCcc----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDIS----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~~----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ...++..|+|||.+.++.++.++|||||||++|||++ |..||...........+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~----------- 331 (377)
T 3cbl_A 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----------- 331 (377)
T ss_dssp CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT-----------
T ss_pred cCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----------
Confidence 5433221 1234678999999999999999999999999999998 99999887655443332211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
.....+..++..+.+|+.+||+.||++|||+.+|++.|+++.++.
T Consensus 332 ------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 332 ------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 011123445678999999999999999999999999999987653
No 40
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-45 Score=365.63 Aligned_cols=264 Identities=19% Similarity=0.301 Sum_probs=212.6
Q ss_pred hcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.+.+ +....+.+++|+............+.+|+.++.+++|||||++++++... .
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--L 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC--C
Confidence 3678999999999999999999765 23345566666654444555667899999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC---cEE
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS----DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF---SAK 324 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~vk 324 (473)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+++ |+||||||+||||+.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEE
Confidence 7899999999999999996532 2246899999999999999999999999 99999999999999554 599
Q ss_pred EeccCCCcccCC----CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPE----TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~----~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||+++.... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...........+....
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~- 303 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG- 303 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-
Confidence 999999975422 12233456889999999999999999999999999999998 999998876554433332110
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....+..++..+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus 304 ----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 304 ----------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----------------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 01123345678999999999999999999999999999876543
No 41
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-44 Score=358.97 Aligned_cols=268 Identities=22% Similarity=0.331 Sum_probs=215.9
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
....++|...+.||+|+||.||+|...+.. ...+.+++|+............+.+|+.++..++||||+++++++.+.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 344688999999999999999999875422 344566666655444445567899999999999999999999999765
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceee
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSD---------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMY 307 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivH 307 (473)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||.|||+++ |+|
T Consensus 123 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH 197 (343)
T 1luf_A 123 --KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH 197 (343)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred --CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 789999999999999999965321 257999999999999999999999999 999
Q ss_pred cCCCCCceeeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCC
Q 011995 308 NEFSTANIQIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382 (473)
Q Consensus 308 rDlkp~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~ 382 (473)
|||||+|||++.++.+||+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999987653322 223456789999999999999999999999999999999 99999
Q ss_pred CCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 383 DSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.+....+....+.... ...++..++..+.+++.+||+.||.+|||+.+|++.|+++..+..
T Consensus 278 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 278 YGMAHEEVIYYVRDGN-----------------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TTSCHHHHHHHHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCCChHHHHHHHhCCC-----------------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 8766544332221100 011234556789999999999999999999999999999886554
No 42
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-44 Score=360.52 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=206.8
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----hhhHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----QGVKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
..+.|.+.+.||+|+||.||+|.... ++..+++|+....... ...+.+.+|+.+|..++||||+++++++.+
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECC---CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence 35679999999999999999998654 3455666666544321 135678999999999999999999999977
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC----cE
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF----SA 323 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~v 323 (473)
. ..+++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+
T Consensus 87 ~--~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~v 158 (361)
T 2yab_A 87 R--TDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHI 158 (361)
T ss_dssp S--SEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCE
T ss_pred C--CEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCE
Confidence 6 789999999999999999943 346999999999999999999999999 99999999999998776 79
Q ss_pred EEeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 324 KLSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 324 kl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
||+|||++...... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+......
T Consensus 159 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-- 236 (361)
T 2yab_A 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD-- 236 (361)
T ss_dssp EECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--
T ss_pred EEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--
Confidence 99999999876543 334567899999999999989999999999999999999999999887655543333211000
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....+....+..+.+||.+||..||.+|||+.|+++
T Consensus 237 ------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 ------------FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ------------CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011234578999999999999999999999985
No 43
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.1e-45 Score=359.50 Aligned_cols=259 Identities=19% Similarity=0.342 Sum_probs=205.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||+||+|.+..+.. ...++++|..+........+.+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---S
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---C
Confidence 3679999999999999999999754432 22334444443333445667899999999999999999999999763 5
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++|+||+.+|+|.+++... ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCccee
Confidence 78999999999999999653 356999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
....... ....+|..|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--------- 236 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--------- 236 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC---------
Confidence 6643321 23345779999999999999999999999999999999 999998766544333332111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
....+..++.++.+++.+||+.||.+||++.+|++.|+++..
T Consensus 237 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 --------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111234456789999999999999999999999999998764
No 44
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.2e-44 Score=347.84 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=196.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC---ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||+|.+.+ ..+++|+...... ....+.+.+|+++++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIG-----DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-- 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETT-----EEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred hhheeeeeeeccCCCeEEEEEEEcC-----CeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC--
Confidence 3678999999999999999998653 3344555443321 23457789999999999999999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC--------CCc
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK--------DFS 322 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~--------~~~ 322 (473)
+..++||||+++++|.+++. ...+++..+..++.|++.||.|||+++..+|+||||||+|||++. ++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp --CEEEEECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred CceEEEEEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcc
Confidence 78899999999999999983 346999999999999999999999998555889999999999986 678
Q ss_pred EEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 323 AKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+||+|||++............+++.|+|||.+.+..++.++||||||+++|||++|+.||...........+...
T Consensus 155 ~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----- 229 (271)
T 3dtc_A 155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----- 229 (271)
T ss_dssp EEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-----
T ss_pred eEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-----
Confidence 999999999877655555667899999999999999999999999999999999999999876654433222111
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
......+..++..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 230 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -----------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111122445568899999999999999999999999999864
No 45
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-44 Score=352.69 Aligned_cols=264 Identities=18% Similarity=0.258 Sum_probs=209.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|++.+.||+|+||.||+|.... ....+++|+..... .....+.+.+|+.++..++||||+++++++... +
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTI---LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED--D 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETT---TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS--S
T ss_pred hccEEEEEEEccCCCEEEEEEEECC---CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC--C
Confidence 3579999999999999999998543 34556666654432 334457899999999999999999999998766 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 158 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIA 158 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred eEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCc
Confidence 899999999999999999543 36999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.+..............
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~---------- 228 (294)
T 4eqm_A 159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS---------- 228 (294)
T ss_dssp TTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSC----------
T ss_pred cccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhcc----------
Confidence 8764332 233468999999999999999999999999999999999999998766543321111000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhcccCC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-TMRSIFEELDRQESRKSS 461 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~~l~~~~~~ 461 (473)
.+.....+...++..+.+++.+||..||.+|| +++++.+.|+.+......
T Consensus 229 ---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 229 ---VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp ---CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred ---CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 00000111234557899999999999999998 999999999987755443
No 46
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.6e-44 Score=346.45 Aligned_cols=255 Identities=18% Similarity=0.332 Sum_probs=208.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|...++. .+++|+.. .......++.+|++++.+++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~vavK~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQY----DVAVKMIK--EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE--YPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTE----EEEEEEEC--BTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCce----eEEEEEec--cCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccC--Cce
Confidence 467999999999999999999876532 24444443 3334457799999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred EEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCcccee
Confidence 9999999999999999543 345899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...........+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 223 (268)
T 3sxs_A 154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR---------- 223 (268)
T ss_dssp CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC----------
T ss_pred cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC----------
Confidence 654432 23345677999999999889999999999999999999 9999987665544332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+...+..+.+++.+||+.||.+|||+.++++.|+.+..+
T Consensus 224 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 -------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 011233457899999999999999999999999999998754
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.4e-44 Score=352.97 Aligned_cols=263 Identities=22% Similarity=0.382 Sum_probs=214.6
Q ss_pred hcccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|..... ......+++|+..........+.+.+|+.+++.++||||+++++++... +
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--G 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--S
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC--C
Confidence 56899999999999999999986322 2344556666655444455567899999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD---------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 310 (473)
..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Cccccc
Confidence 89999999999999999975432 234899999999999999999999999 999999
Q ss_pred CCCceeeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCC
Q 011995 311 STANIQIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSR 385 (473)
Q Consensus 311 kp~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~ 385 (473)
||+|||++.++.+||+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998664332 123356788999999999889999999999999999999 99999876
Q ss_pred ChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 386 HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
........+.... ....+..++..+.+++.+||+.||.+|||+.+|++.|+++..+
T Consensus 257 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPERLFNLLKTGH-----------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGGGHHHHHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHhhcCC-----------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 6544333222110 1112345568899999999999999999999999999998764
No 48
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.7e-44 Score=347.69 Aligned_cols=256 Identities=16% Similarity=0.272 Sum_probs=207.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|.+.++. .+++|+. .......+++.+|++++..++||||+++++++.+. ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~vavK~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQY----DVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--RPI 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTE----EEEEEEE--CTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCC----eEEEEEe--cCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC--CCe
Confidence 468889999999999999999876532 2344443 33444557899999999999999999999999765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 95 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp EEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred EEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccc
Confidence 9999999999999999642 346999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...........+....
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----------- 238 (283)
T 3gen_A 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------- 238 (283)
T ss_dssp BCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----------
T ss_pred ccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc-----------
Confidence 64432 223345678999999999999999999999999999998 999998776554433322110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....+...+..+.+++.+||+.||.+|||+.++++.|+++..+.
T Consensus 239 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 239 ------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ------CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 01113334578999999999999999999999999999987654
No 49
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-44 Score=353.27 Aligned_cols=266 Identities=19% Similarity=0.309 Sum_probs=214.4
Q ss_pred hcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|...+.||+|+||.||+|.+.. +....+.+++|+..........+.+.+|+.++.++ +||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-- 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-- 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC--
Confidence 4689999999999999999998633 23355666677665444445567899999999999 999999999999766
Q ss_pred CceEEEEEeccCCChhhhhhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSD---------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceE
Confidence 788999999999999999965432 235899999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
|++.++.+||+|||++........ ....+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999999999987654322 23356778999999999999999999999999999999 9999987653322
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
...... . ......+...+..+.+++.+||+.||.+|||+.+|++.|+++..+..
T Consensus 257 ~~~~~~------~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 257 FYKMIK------E----------GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHH------H----------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhc------c----------CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 111100 0 00111133456789999999999999999999999999999876543
No 50
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-44 Score=355.25 Aligned_cols=252 Identities=15% Similarity=0.165 Sum_probs=205.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+.. ........+.+|+.+++.++||||+++++++.+. +..
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~~a~K~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~ 76 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSS---KKTYMAKFVK--VKGTDQVLVKKEISILNIARHRNILHLHESFESM--EEL 76 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEC--CCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--TEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCC---CcEEEEEEEe--cCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC--CEE
Confidence 46899999999999999999986543 3455555544 3344556788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC--CCcEEEeccCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK--DFSAKLSGYGCA 331 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~--~~~vkl~DFGla 331 (473)
++||||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++
T Consensus 77 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a 151 (321)
T 1tki_A 77 VMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQA 151 (321)
T ss_dssp EEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred EEEEEeCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCC
Confidence 999999999999999953 2346999999999999999999999999 999999999999987 789999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||...........+........
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------- 223 (321)
T 1tki_A 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-------- 223 (321)
T ss_dssp EECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--------
T ss_pred eECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC--------
Confidence 8775433 2345688999999999988899999999999999999999999988765544333221110000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .....++.++.+|+.+||..||.+|||+.|+++.
T Consensus 224 --~----~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 224 --E----EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --H----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --h----hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 0012346789999999999999999999999984
No 51
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.6e-44 Score=357.06 Aligned_cols=259 Identities=18% Similarity=0.308 Sum_probs=208.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|.+..+.. ...++++++............+.+|+.++..++||||+++++++.. ...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG---SSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB---SSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---Ccc
Confidence 578888999999999999999754433 3334455554444444556778899999999999999999999853 578
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999999999999643 346899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------- 235 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER--------- 235 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB---------
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---------
Confidence 64332 233456779999999999999999999999999999999 9999987665544333322110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+..++.++.+++.+||..||.+|||+.++++.|+++...
T Consensus 236 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 236 --------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011223445678999999999999999999999999987643
No 52
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.4e-44 Score=351.15 Aligned_cols=260 Identities=18% Similarity=0.347 Sum_probs=204.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|...+.||+|+||.||+|.+.++ +++++.+.. ......+.+.+|+.+++.++||||+++++++.. +..
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~~------~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 106 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHGD------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNL 106 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSSE------EEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSC
T ss_pred cceEEEeEecCCCCeEEEEEEECCE------EEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---CcE
Confidence 5788889999999999999985432 334444432 344456789999999999999999999998753 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+.+|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 107 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~ 181 (307)
T 3lb7_A 107 AIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred EEEEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence 9999999999999999643 456999999999999999999999999 99999999999999999999999999976
Q ss_pred cCC----CCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 334 IPE----TDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 334 ~~~----~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
... .......+|+.|+|||++. +..++.++|||||||++|||++|+.||................
T Consensus 182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------- 253 (307)
T 3lb7_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-------- 253 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT--------
T ss_pred cccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC--------
Confidence 532 1223457899999999996 5668899999999999999999999998765544322111000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
...+.+ ..+...++..+.+|+.+||+.||++||++.+|++.|+.+.....
T Consensus 254 ---~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 254 ---YASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ---CCCCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred ---CCCcch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 001111 11223456789999999999999999999999999998876543
No 53
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.7e-44 Score=348.67 Aligned_cols=263 Identities=19% Similarity=0.336 Sum_probs=207.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
..+|...+.||+|+||+||+|.+.++......+++++..........+.+.+|+.++++++||||+++++++...+ +..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-GSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-SCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-Cce
Confidence 3568888999999999999999765544444445555444344455678999999999999999999999876543 678
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 103 ~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999999964 3456899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCC------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 334 IPETD------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 334 ~~~~~------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
..... .....+|+.|+|||.+.+..++.++|||||||++|||++ |.+||...........+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-------- 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-------- 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC--------
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC--------
Confidence 64332 223456678999999999999999999999999999999 667776654433222221100
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....+..++..+.+++.+||+.||.+|||+.++++.|+++....
T Consensus 250 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 250 ---------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 00113334578999999999999999999999999999987643
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.1e-44 Score=358.02 Aligned_cols=249 Identities=17% Similarity=0.241 Sum_probs=206.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||+|.... +++.+++|+..... .......+.+|+.+|..++||||+++++++.+. +
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--D 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS--S
T ss_pred hHHeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC--C
Confidence 4689999999999999999998654 34556666654321 223456788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a 152 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLC 152 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccch
Confidence 89999999999999999854 246899999999999999999999999 999999999999999999999999999
Q ss_pred cccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
+.... ......++|+.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 153 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~----------- 221 (337)
T 1o6l_A 153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE----------- 221 (337)
T ss_dssp BCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------
T ss_pred hhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 76432 23345688999999999999999999999999999999999999998766544333222110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+.++.+||.+||+.||.+|| ++.+|++.
T Consensus 222 -------~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 -------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -------CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 113445668899999999999999999 89999864
No 55
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-44 Score=363.38 Aligned_cols=264 Identities=19% Similarity=0.339 Sum_probs=202.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
..|...+.||+|+||.||+|.+.+.......+++|+..........+.|.+|+.++++++||||+++++++.... +..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-GSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS-SCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-CCeE
Confidence 346777899999999999998754433334444554443344556788999999999999999999999876542 6789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccc
Confidence 99999999999999964 3456899999999999999999999999 999999999999999999999999999866
Q ss_pred CCCCc------cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 335 PETDI------SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 335 ~~~~~------~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
..... ....+++.|+|||.+.+..++.++|||||||++|||++ |.+||......+....+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~--------- 313 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------- 313 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC---------
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC---------
Confidence 43221 23345678999999999999999999999999999999 788887654433222221100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
....+..++..+.+++.+||+.||.+|||+.+|++.|+++......
T Consensus 314 --------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 314 --------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 0011334567899999999999999999999999999998765543
No 56
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-44 Score=358.11 Aligned_cols=264 Identities=19% Similarity=0.287 Sum_probs=208.3
Q ss_pred hcccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|...+.||+|+||.||+|..... ......+++|+............+.+|+.++.++ +||||+++++++...
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-- 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-- 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC--
Confidence 47899999999999999999986332 2244556666665444445567899999999999 999999999999775
Q ss_pred CceEEEEEeccCCChhhhhhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDG--------------------PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 310 (473)
+..++||||+++|+|.+++...... ..+++..+..++.||+.||+|||+++ |+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence 7899999999999999999754321 34899999999999999999999999 999999
Q ss_pred CCCceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCC
Q 011995 311 STANIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSR 385 (473)
Q Consensus 311 kp~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~ 385 (473)
||+|||++.++.+||+|||++........ ....+|+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999986643321 23355778999999999999999999999999999998 99999876
Q ss_pred ChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 386 HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.......... ........+..++.++.+|+.+||..||.+|||+.+|++.|+.+...
T Consensus 279 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 279 PVDANFYKLI----------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCSHHHHHHH----------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcHHHHHHHH----------------hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 5332211110 00011122344568899999999999999999999999999987654
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-44 Score=352.77 Aligned_cols=253 Identities=17% Similarity=0.217 Sum_probs=205.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----hhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----QGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
.++|...+.||+|+||.||+|.... ++..+++|+....... ...+.+.+|+.+|+.++||||+++++++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred ccceEeceEEeeCCCeEEEEEEECC---CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 4679999999999999999998654 3345566665543221 2357799999999999999999999999875
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC----cEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF----SAK 324 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~vk 324 (473)
...++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+|
T Consensus 87 --~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~k 158 (326)
T 2y0a_A 87 --TDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158 (326)
T ss_dssp --SEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEE
T ss_pred --CEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEE
Confidence 789999999999999999943 356999999999999999999999999 99999999999999887 799
Q ss_pred EeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 325 LSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 325 l~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+|||++...... ......+|+.|+|||++.+..++.++|||||||++|||++|..||.+.........+......
T Consensus 159 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--- 235 (326)
T 2y0a_A 159 IIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--- 235 (326)
T ss_dssp ECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC---
T ss_pred EEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC---
Confidence 9999999876433 334567899999999999889999999999999999999999999876654433322211100
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+....+..+.+|+.+||+.||.+|||+.++++.
T Consensus 236 -----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 -----------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -----------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -----------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000112345788999999999999999999999973
No 58
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.2e-44 Score=355.90 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=200.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|.... ..+.+++|+..........+.+.+|+.+++.++||||+++++++.+. +..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--NIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS--SEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECC---CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC--CeE
Confidence 4689999999999999999998654 34556677666554444557889999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp EEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccce
Confidence 999999999999999843 346999999999999999999999999 99999999999999999999999999976
Q ss_pred cCCC----CccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPET----DISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~----~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+... ......+|+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ...|...
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~--------- 224 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEK--------- 224 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-HHHHHTT---------
T ss_pred eccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHHhcc---------
Confidence 5322 2235578999999999987775 77899999999999999999999765432211 1111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........++..+.+|+.+||+.||.+|||+.|+++.
T Consensus 225 -----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 225 -----KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -----CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000123456788999999999999999999999875
No 59
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.9e-44 Score=343.64 Aligned_cols=258 Identities=21% Similarity=0.320 Sum_probs=209.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|.+.+ ..+++|+..... .....+.+.+|+.++++++||||+++++++.+.....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQG-----NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETT-----EEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEECC-----eeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence 3578889999999999999999742 345566665543 3345577999999999999999999999998765578
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++. .|+||||||+|||++.++.++|+|||++.
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTLEP-LIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTSSS-CCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eEeeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceecCCCccceEEEcCCcceeEEecccee
Confidence 89999999999999999753 23468999999999999999999999763 39999999999999999999999998875
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCC---cCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTP---KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~---~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.... ....+|+.|+|||.+.+..++. ++|||||||++|||++|+.||...........+...
T Consensus 162 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------------ 226 (271)
T 3kmu_A 162 SFQS---PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE------------ 226 (271)
T ss_dssp TTSC---TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS------------
T ss_pred eecc---cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc------------
Confidence 5322 3456789999999998765544 799999999999999999999876654432221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
.....++..++.++.+++.+||+.||.+|||+.++++.|+++.+
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 ----GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11112244566889999999999999999999999999999865
No 60
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7e-44 Score=357.84 Aligned_cols=255 Identities=16% Similarity=0.208 Sum_probs=207.6
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|...+.||+|+||.||+|.... +...+++|+..... .....+.+.+|+.+++.++|||||++++++.+.
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-- 100 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-- 100 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--
Confidence 346789999999999999999998644 34566677665543 334457789999999999999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEEEec
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSG 327 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vkl~D 327 (473)
+..|+||||+.+|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEee
Confidence 789999999999999999853 346899999999999999999999999 9999999999999865 4599999
Q ss_pred cCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 328 YGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 328 FGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
||++....... .....+|+.|+|||++.+..++.++|||||||++|||++|.+||.+.........+......
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~------ 248 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD------ 248 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC------
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC------
Confidence 99998765432 34567899999999999989999999999999999999999999876654433322211100
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
........++.++.+||.+||+.||.+|||+.++++.
T Consensus 249 --------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 --------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp --------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000112456789999999999999999999999865
No 61
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.7e-44 Score=353.64 Aligned_cols=271 Identities=21% Similarity=0.371 Sum_probs=199.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
..++|...+.||+|+||.||+|....+......+++|+..... .....+.+.+|+++++.++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3567999999999999999999865544333345555544332 345567899999999999999999999998765211
Q ss_pred ----ceEEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 252 ----QRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 252 ----~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEE
Confidence 2389999999999999985432 2236899999999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||++........ ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.........+....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~- 256 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN- 256 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC-
Confidence 999999987644322 23345678999999999999999999999999999999 999998766544333221110
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSS 463 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~ 463 (473)
....+..++.++.+|+.+||+.||.+|||+.++++.|+++.......+
T Consensus 257 ----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 257 ----------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred ----------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 011234456789999999999999999999999999999887665443
No 62
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-44 Score=346.70 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=211.1
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
.|...+.||+|+||+||+|.+.++......+++|+..........+.+.+|+.+++.++||||+++++++...+ ...++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE-GLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-SCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC-CCcEE
Confidence 45566899999999999999766655555666666654444456678999999999999999999999987652 44589
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 101 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999964 3456899999999999999999999999 9999999999999999999999999997654
Q ss_pred CC------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcC-CCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 336 ET------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTG-RKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 336 ~~------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
.. ......++..|+|||.+.+..++.++|||||||++|||++| .+||...........+....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~---------- 245 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR---------- 245 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC----------
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC----------
Confidence 32 22334667899999999999999999999999999999995 55555544433332222111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
....+..++..+.+++.+||+.||.+|||+.++++.|+++.+....
T Consensus 246 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 -------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 0111334557899999999999999999999999999998766543
No 63
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.8e-44 Score=350.80 Aligned_cols=273 Identities=19% Similarity=0.282 Sum_probs=209.4
Q ss_pred cccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+.|+..+.||+|+||.||+|.+.. +....+.+++|+............+.+|+.++..++||||+++++++...+...+
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 458888999999999999998643 3345677777776655445556789999999999999999999999987766779
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence 9999999999999999543 345999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc--ccc
Q 011995 334 IPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD--DCR 406 (473)
Q Consensus 334 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 406 (473)
..... .....+|..|+|||.+.+..++.++|||||||++|||++|..|+......... ...+.... ...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK----MIGPTHGQMTVTR 251 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH----HHCSCCGGGHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh----ccCCcccccCHHH
Confidence 65432 22345677899999999999999999999999999999999986532111100 00000000 000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
+............+..++..+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111111122234566789999999999999999999999999999875
No 64
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-44 Score=353.98 Aligned_cols=276 Identities=21% Similarity=0.289 Sum_probs=215.3
Q ss_pred cccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|+..+.||+|+||+||++.+.. +....+.+++|+............+.+|+++++.++||||+++++++.+.+...+++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 4888999999999999997643 334567777777765545556778999999999999999999999998866678999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 113 v~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 99999999999999543 4999999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 336 ETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 336 ~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
... .....++..|+|||.+.+..++.++|||||||++|||++|..||....... .....+...... ...+...
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 263 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMT-VLRLTEL 263 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHH-HHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchh-HHHHHHH
Confidence 432 123456778999999999899999999999999999999999997532211 111111000000 0011111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.........+..++.++.+|+.+||+.||.+|||+.+|++.|+.+.++...
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 122222233556678999999999999999999999999999998766543
No 65
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.9e-44 Score=366.44 Aligned_cols=255 Identities=16% Similarity=0.186 Sum_probs=206.8
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|+..+.||+|+||+||+|.... +++.+++|+..... .......+.+|+.+++.++|||||++++++.+.
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-- 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVL---AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE-- 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETT---TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS--
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC--
Confidence 346789999999999999999998543 34566666665443 233456789999999999999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC---CCCcEEEec
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSG 327 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~---~~~~vkl~D 327 (473)
+..|+||||+.+|+|.+.+... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred CEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEcc
Confidence 7899999999999999998653 46999999999999999999999999 99999999999998 468899999
Q ss_pred cCCCcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 328 YGCAGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 328 FGla~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
||++....... .....+|+.|+|||++.+..++.++|||||||++|+|++|.+||.+.........+......
T Consensus 157 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~----- 231 (444)
T 3soa_A 157 FGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD----- 231 (444)
T ss_dssp CSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-----
T ss_pred CceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC-----
Confidence 99998765432 24567899999999999989999999999999999999999999887655544333211100
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
........++.++.+|+.+||+.||.+|||+.|+++.
T Consensus 232 ---------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 ---------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0001123456889999999999999999999999873
No 66
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.9e-44 Score=345.16 Aligned_cols=259 Identities=18% Similarity=0.313 Sum_probs=209.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|.+.++......+++|+..........+.+.+|+.+++.++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS---SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCC
Confidence 46899999999999999999987665555555666655544344566789999999999999999999999854 456
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 88 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 8999999999999999642 346899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...........+....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~----------- 231 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----------- 231 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC-----------
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC-----------
Confidence 64432 223355788999999999999999999999999999998 999997655444332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
....+..++..+.+++.+||..||.+|||+.++++.|+++..
T Consensus 232 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 232 ------RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 001133455789999999999999999999999999998754
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-44 Score=347.81 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=197.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-------------------------ChhhHhHHHHHH
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-------------------------SQGVKEFINDVN 228 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~Ei~ 228 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+...... ....+.+.+|++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 88 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNEND---NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA 88 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTT---TEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCC---CcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence 46899999999999999999986543 34555665543321 112356899999
Q ss_pred HHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeec
Q 011995 229 TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYN 308 (473)
Q Consensus 229 ~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 308 (473)
+++.++||||+++++++.+......++||||+++++|.+++. ...+++..+..++.||+.||+|||+++ |+||
T Consensus 89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~ 161 (298)
T 2zv2_A 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHR 161 (298)
T ss_dssp HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECC
T ss_pred HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecc
Confidence 999999999999999998755578999999999999988762 346999999999999999999999999 9999
Q ss_pred CCCCCceeeCCCCcEEEeccCCCcccCCCC--ccCcccccccCChhhhhcCC---CCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 309 EFSTANIQIDKDFSAKLSGYGCAGHIPETD--ISNSSVAAANLSVETLERGL---LTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 309 Dlkp~NILl~~~~~vkl~DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
||||+|||++.++.+||+|||++....... .....+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||.
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 999999999999999999999998765432 24457899999999997655 3778999999999999999999998
Q ss_pred CCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..........+..... .......++.++.+|+.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 242 DERIMCLHSKIKSQAL----------------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CSSHHHHHHHHHHCCC----------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccHHHHHHHHhcccC----------------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 7654433222211100 00001234578999999999999999999999975
No 68
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.4e-44 Score=372.66 Aligned_cols=260 Identities=18% Similarity=0.309 Sum_probs=213.3
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|.+... ...+++ |.+.......+.|.+|+.+|++++|||||+++++|... ..
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~---~~~vav--K~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 290 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKY---SLTVAV--KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PP 290 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGG---TEEEEE--EECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCC---CeEEEE--EEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC--Cc
Confidence 356788889999999999999997542 233444 44444444578899999999999999999999999765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.+|||||+++|+|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 291 ~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 291 FYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp CEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred EEEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccce
Confidence 99999999999999999753 2456899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.........+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~------------ 434 (495)
T 1opk_A 367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK------------ 434 (495)
T ss_dssp CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT------------
T ss_pred eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------------
Confidence 7654332 22345678999999999999999999999999999999 9999987665443322211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
......+..++..+.+||.+||+.||.+|||+.+|++.|+.+....+
T Consensus 435 -----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 435 -----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp -----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 11112244566889999999999999999999999999999875543
No 69
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.9e-43 Score=348.19 Aligned_cols=269 Identities=17% Similarity=0.249 Sum_probs=193.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|... .+++.+++|+............+.+|+.+++.++||||+++++++..+ +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNK---TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE--NKL 78 (317)
T ss_dssp ---------------CEEEEEECS---SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT--TEE
T ss_pred ccceeEeeEECCCCCEEEEEEEEC---CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC--CeE
Confidence 467888999999999999999843 345666777776655455567889999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
++||||++ |+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999997 59998885421 2245899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc--
Q 011995 331 AGHIPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC-- 405 (473)
Q Consensus 331 a~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 405 (473)
+...... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+...........
T Consensus 155 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 155 ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp CEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred ceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence 9876432 23445789999999999764 589999999999999999999999988776554433211100000000
Q ss_pred cccc--cccccc------------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSL--IMDPQL------------KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~--~~~~~l------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.... ...+.+ ........+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 000000 001112345789999999999999999999999874
No 70
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.5e-44 Score=355.23 Aligned_cols=263 Identities=12% Similarity=0.084 Sum_probs=207.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|.... ..+.+++|+..... ....+.+|+.+++.+ +||||+++++++... +.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--~~ 79 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLY---TNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCG--KY 79 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETT---TTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEET--TE
T ss_pred cCCeEEEEEeeccCCceEEEEEECC---CCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecC--Cc
Confidence 4679999999999999999998543 34566677665432 235688999999999 999999999998876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc-----EEEec
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS-----AKLSG 327 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-----vkl~D 327 (473)
.++||||+ +++|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~D 153 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIID 153 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECC
T ss_pred cEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEE
Confidence 99999999 99999999653 357999999999999999999999999 999999999999998887 99999
Q ss_pred cCCCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 328 YGCAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 328 FGla~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
||++..+.... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+..............
T Consensus 154 Fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~ 233 (330)
T 2izr_A 154 FALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 233 (330)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH
T ss_pred cccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH
Confidence 99998664332 235578999999999999999999999999999999999999998754332222111100
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.. .... ....+ ....+ ++.+++..||..||.+||++.+|++.|+++..+...
T Consensus 234 ~~-----~~~~-~~~~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 234 DT-----KRAT-PIEVL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HH-----HHHS-CHHHH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hh-----hccC-CHHHH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 00 0000 00000 11233 899999999999999999999999999988776543
No 71
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.4e-44 Score=352.27 Aligned_cols=274 Identities=19% Similarity=0.300 Sum_probs=219.3
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccc
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKL 241 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l 241 (473)
+...+.....++|...+.||+|+||.||+|.+.+ +....+.+++|+..........+.+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 4455555567899999999999999999998643 33456777777766554455567899999999999 79999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeec
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYN 308 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 308 (473)
++++...+ ...++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+++ |+||
T Consensus 97 ~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~ 172 (316)
T 2xir_A 97 LGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHR 172 (316)
T ss_dssp EEEECCTT-SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred EEEEecCC-CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccc
Confidence 99987653 568999999999999999965432 123899999999999999999999999 9999
Q ss_pred CCCCCceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCC
Q 011995 309 EFSTANIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383 (473)
Q Consensus 309 Dlkp~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~ 383 (473)
||||+|||++.++.+||+|||++........ ....+|+.|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999986643321 23456789999999999999999999999999999998 999997
Q ss_pred CCChHHHHh-HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 384 SRHPKEERN-LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 384 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
......... .+... .....+...+..+.+++.+||+.||.+|||+.+|++.|+.+.+..
T Consensus 253 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 253 GVKIDEEFCRRLKEG-----------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp TCCCSHHHHHHHHHT-----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHhccC-----------------ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 754332211 11100 001123345678999999999999999999999999999987543
No 72
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.7e-44 Score=369.24 Aligned_cols=258 Identities=23% Similarity=0.395 Sum_probs=211.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|.+.++ ..+++|+ +.......+.|.+|+.+|+.++|||||++++++. . +.
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~vavK~--~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~--~~ 256 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKH----TKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K--EP 256 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTT----EEEEEEE--ECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S--SS
T ss_pred chHHeEEEEEcccCCceEEEEEEECCc----cEEEEEE--ecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C--Cc
Confidence 456888999999999999999997643 2344444 4434455788999999999999999999999985 2 67
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~ 332 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR 332 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred cEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence 89999999999999999643 2235889999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ....++..|+|||++....++.++|||||||++|||++ |+.||.+....+....+...
T Consensus 333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~----------- 401 (454)
T 1qcf_A 333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG----------- 401 (454)
T ss_dssp GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----------
T ss_pred EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----------
Confidence 7644321 23345678999999999999999999999999999999 99999877655433322211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.....+..++.++.+||.+||..||.+|||+.+|++.|+.+.....
T Consensus 402 ------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 402 ------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp ------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred ------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 0011234566889999999999999999999999999999876543
No 73
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.3e-44 Score=351.98 Aligned_cols=259 Identities=19% Similarity=0.338 Sum_probs=206.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|.+..+.. ...+++++.............+.+|+.++..++||||+++++++... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---S
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---C
Confidence 3679999999999999999999754432 33344455554444555678899999999999999999999999763 4
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++|+||+.+|+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 88999999999999999653 346999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~--------- 236 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--------- 236 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC---------
Confidence 764322 123345678999999999999999999999999999999 999998766554333322111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
....+..++.++.+|+.+||+.||.+|||+.|+++.|+++..
T Consensus 237 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 --------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111234456789999999999999999999999999998764
No 74
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2e-43 Score=350.32 Aligned_cols=265 Identities=19% Similarity=0.338 Sum_probs=213.4
Q ss_pred hcccccCcceeecCCceEEEEEECCC----CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDD----ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
.++|...+.||+|+||.||+|...+. ......+++|+............+.+|++++..+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46899999999999999999987532 2344555566555444445567899999999999 999999999999765
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+||
T Consensus 114 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 188 (334)
T 2pvf_A 114 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNV 188 (334)
T ss_dssp --SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGE
T ss_pred --CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceE
Confidence 789999999999999999975431 235899999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
|++.++.+||+|||++....... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 99999999999999998765432 223355788999999998889999999999999999999 9999987665443
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
...+.... ....+..++..+.+++.+||+.||.+|||+.+|++.|+++.....
T Consensus 269 ~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 269 FKLLKEGH-----------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCC-----------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 32221110 011234456789999999999999999999999999999876543
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.8e-44 Score=351.36 Aligned_cols=253 Identities=17% Similarity=0.249 Sum_probs=201.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-- 250 (473)
..++|+..+.||+|+||.||+|+... .++.+++|+..........+.+.+|+.+|++++|||||++++++.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETT---TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcC---CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 45789999999999999999999653 3456677777665555667889999999999999999999998865421
Q ss_pred -----------------------------------------------------CceEEEEEeccCCChhhhhhcCCCCCC
Q 011995 251 -----------------------------------------------------DQRMLIYERLFHGSLDRLIYGRSDGPP 277 (473)
Q Consensus 251 -----------------------------------------------------~~~~lV~E~~~~gsL~~~l~~~~~~~~ 277 (473)
...++||||+++|+|.+++........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 138999999999999999977655556
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC--------------ccCcc
Q 011995 278 IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD--------------ISNSS 343 (473)
Q Consensus 278 l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~--------------~~~~~ 343 (473)
..+..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... .....
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 788889999999999999999999 9999999999999999999999999998765432 23346
Q ss_pred cccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHH
Q 011995 344 VAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423 (473)
Q Consensus 344 ~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 423 (473)
+|+.|+|||.+.+..++.++|||||||++|||++|..|+.. ......... .... .......
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~-------------~~~~-~~~~~~~ 298 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVR-------------NLKF-PLLFTQK 298 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHH-------------TTCC-CHHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhh-------------ccCC-CcccccC
Confidence 89999999999999999999999999999999998766421 111111000 0000 0012345
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 424 ARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 424 ~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.++.+|+.+||+.||.+|||+.|+++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 577899999999999999999999986
No 76
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-43 Score=349.35 Aligned_cols=265 Identities=18% Similarity=0.320 Sum_probs=207.5
Q ss_pred cccccCcceeecCCceEEEEEECCCC-eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA-STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|...+.||+|+||.||+|.+.... .....+++|+............+.+|+.++..++||||+++++++... +..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY--KPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC--CCc
Confidence 46777899999999999999865432 234455566655444445566799999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999999643 356999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... ....++..|+|||.+.+..++.++|||||||++|||++ |..||......+....+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~---------- 266 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---------- 266 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT----------
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC----------
Confidence 643321 12244678999999999999999999999999999999 99999876554433222110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSS 463 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~ 463 (473)
.....+..++..+.+++.+||+.||.+||++.+|++.|+++.......+
T Consensus 267 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~ 315 (333)
T 1mqb_A 267 -------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 315 (333)
T ss_dssp -------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGG
T ss_pred -------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhh
Confidence 0011133456789999999999999999999999999999876555433
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-43 Score=364.91 Aligned_cols=254 Identities=20% Similarity=0.332 Sum_probs=206.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|.+.+ ..+++|+.... ...+.|.+|+.+|++++|||||++++++.... ...
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~~-----~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 262 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGL 262 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-----EEEEEEEESSC---TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-SCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEecC-----CeEEEEEeCCc---hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCC-Cce
Confidence 4678889999999999999998753 24455554432 25678999999999999999999999987652 478
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 263 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EEEEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 9999999999999999754 2334799999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+....+.. +
T Consensus 339 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-------~-------- 402 (450)
T 1k9a_A 339 ASSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-------G-------- 402 (450)
T ss_dssp CC-------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT-------T--------
T ss_pred ccccc-cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-------C--------
Confidence 53322 23356789999999999999999999999999999998 9999987654433222211 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.....+..++..+.+||.+||+.||.+|||+.+|++.|+.+...
T Consensus 403 --~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 --YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11122445678899999999999999999999999999988643
No 78
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.3e-44 Score=360.01 Aligned_cols=248 Identities=19% Similarity=0.264 Sum_probs=201.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||+|+...+ .+.+++|+..... .......+.+|+.++..+ +||||+++++++.+.
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~-- 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKET---GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP-- 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCC---CCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC--
Confidence 57899999999999999999996543 4556666655321 223346688999999988 799999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+||||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccc
Confidence 7899999999999999999543 46999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++..... .....++|+.|+|||++.+..++.++|||||||++|||++|+.||......+....+....
T Consensus 171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------- 240 (353)
T 3txo_A 171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE---------- 240 (353)
T ss_dssp CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----------
T ss_pred eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Confidence 9864322 3345578999999999998889999999999999999999999998876655443332111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM------RSIFE 450 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~eil~ 450 (473)
..++...+.++.+|+.+||+.||.+||++ .+|++
T Consensus 241 --------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 --------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11244456789999999999999999998 67765
No 79
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-43 Score=354.99 Aligned_cols=254 Identities=17% Similarity=0.253 Sum_probs=201.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC----CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~ 249 (473)
.+.|+..+.||+|+||+||+|....+ .+.+++|+.... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~- 98 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRET---GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD- 98 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCC---CCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-
Confidence 46799999999999999999986543 455666665432 1122457789999999999999999999999876
Q ss_pred CCceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc---EEE
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS---AKL 325 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---vkl 325 (473)
+..|+||||+++|+|.+++.... .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||
T Consensus 99 -~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl 174 (351)
T 3c0i_A 99 -GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKL 174 (351)
T ss_dssp -TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEE
T ss_pred -CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEE
Confidence 78999999999999988875432 2346899999999999999999999999 999999999999986654 999
Q ss_pred eccCCCcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 326 SGYGCAGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 326 ~DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
+|||++....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+........+......
T Consensus 175 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~---- 250 (351)
T 3c0i_A 175 GGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK---- 250 (351)
T ss_dssp CCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC----
T ss_pred ecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC----
Confidence 9999998765433 2345789999999999998999999999999999999999999987432111111110000
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+.. ...++.++.+||.+||+.||.+|||+.++++
T Consensus 251 -------~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 -------MNPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -------CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------CCccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 1134578999999999999999999999986
No 80
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-43 Score=344.88 Aligned_cols=258 Identities=19% Similarity=0.346 Sum_probs=196.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|.+.++ +++|+..... .....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~~------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---PQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSSE------EEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SS
T ss_pred ccceeeeeEecCCCCeEEEEEEEcCc------eEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC---Cc
Confidence 45788899999999999999985432 4455555443 34456779999999999999999999997643 56
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 94 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 168 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLAT 168 (289)
T ss_dssp CEEEEECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC---
T ss_pred cEEEEEecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecc
Confidence 8999999999999999954 3456999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC----CccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 333 HIPET----DISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 333 ~~~~~----~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
..... ......+|+.|+|||.+. +..++.++|||||||++|||++|+.||.................
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------ 242 (289)
T 3og7_A 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS------ 242 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTS------
T ss_pred ccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccc------
Confidence 65321 223456899999999986 56688899999999999999999999987654432211110000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
..+.+ ......++..+.+|+.+||..||.+|||+.+|++.|+++..
T Consensus 243 -----~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 243 -----LSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -----CCCCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -----cCcch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00000 11233456889999999999999999999999999998865
No 81
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.2e-44 Score=355.58 Aligned_cols=264 Identities=20% Similarity=0.300 Sum_probs=211.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|...+.||+|+||.||+|...... ...+.+++++..........+.+.+|+.++..+ +||||+++++++...
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG-- 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC--
Confidence 468999999999999999999975433 234556666665444445567899999999999 899999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRS-----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
+..++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECC
Confidence 78999999999999999986421 1346899999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHh
Q 011995 320 DFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLV 394 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~ 394 (473)
++.+||+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+..........
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 279 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence 9999999999998654322 123455778999999999999999999999999999998 99999875433322111
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.. . ......+...+..+.+++.+||+.||.+|||+.+|++.|+++...
T Consensus 280 ~~------~----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 280 VK------D----------GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HH------H----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Hh------c----------CCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 00 0 001111333457899999999999999999999999999987653
No 82
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-43 Score=344.34 Aligned_cols=262 Identities=18% Similarity=0.303 Sum_probs=215.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|..... ...+++|+. .......+.+.+|+.+++.++||||+++++++.+. ..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~ 83 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKY---SLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PP 83 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGG---TEEEEEEEE--CSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCC---CEEEEEEec--CcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--CC
Confidence 467899999999999999999986543 344445444 34445667899999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccce
Confidence 99999999999999999654 3456999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...........+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~----------- 228 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----------- 228 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----------
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc-----------
Confidence 7654332 23345678999999999999999999999999999999 99999876654433322211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~ 462 (473)
.....+..++..+.+|+.+||..||.+|||+.++++.|+.+......+
T Consensus 229 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~ 276 (288)
T 3kfa_A 229 ------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276 (288)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 111123455688999999999999999999999999999988765443
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-43 Score=349.38 Aligned_cols=247 Identities=18% Similarity=0.252 Sum_probs=205.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||+|....+ ++.+++|+..... .....+.+.+|+.++..++||||+++++++.+. .
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHN---GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA--Q 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT---CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS--S
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC--C
Confidence 46899999999999999999986543 4556666654321 123356778999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a 153 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFA 153 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcc
Confidence 899999999999999999643 46899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------- 219 (318)
T 1fot_A 154 KYVPD-VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE------------- 219 (318)
T ss_dssp EECSS-CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-------------
T ss_pred eecCC-ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-------------
Confidence 87643 2345678999999999999999999999999999999999999998766544333221110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
..++...+.++.+++.+||..||.+|| ++++|++
T Consensus 220 -----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 220 -----LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 112445568899999999999999999 8888885
No 84
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-44 Score=362.27 Aligned_cols=280 Identities=16% Similarity=0.205 Sum_probs=215.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..........+.+.+|++++++++||||+++++++...+....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKT---GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCC---CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 35799999999999999999996543 345566665543333445778899999999999999999999987655688
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----CCCCcEEEeccC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI----DKDFSAKLSGYG 329 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~vkl~DFG 329 (473)
++||||+++|+|.+++........+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 999999999999999965444445999999999999999999999999 9999999999999 778889999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhhc--------CCCCCcCCchHHHHHHHHHHcCCCCCCCCChH----HHHhHhhh
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLER--------GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK----EERNLVKW 396 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~~--------~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~----~~~~~~~~ 396 (473)
++....... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +....+..
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 998765443 345578999999999875 45788999999999999999999999643221 11111111
Q ss_pred cccccc-------cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 397 SRPFLA-------DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 397 ~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
..+... ....+.-..+......+.......+.+++.+||+.||++||++.++++.++++..+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 110000 000000000111222345788899999999999999999999999999999887653
No 85
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-43 Score=345.29 Aligned_cols=264 Identities=13% Similarity=0.113 Sum_probs=208.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+.... .....+.+|+.++..+ +|+|++++++++... ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~---~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~--~~ 80 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLN---NQQVAIKFEPRR---SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG--LH 80 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTT---TEEEEEEEEECC---TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET--TE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCC---CcEEEEEEeccC---CccHHHHHHHHHHHHHhcCCCCCeEEeecCCC--ce
Confidence 45799999999999999999985433 355666655432 3345788999999999 899999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc-----EEEec
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS-----AKLSG 327 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-----vkl~D 327 (473)
.++||||+ +++|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~D 154 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVD 154 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred eEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence 99999999 99999999653 346999999999999999999999999 999999999999987766 99999
Q ss_pred cCCCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 328 YGCAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 328 FGla~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
||++....... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||................
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (298)
T 1csn_A 155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 234 (298)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH
Confidence 99998664332 234568899999999999999999999999999999999999998754322211111000
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
...... .. +. ....++.++.+++.+||+.||.+||++.+|++.|+++..+...
T Consensus 235 ~~~~~~-~~-----~~----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 235 EKKQST-PL-----RE----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HHHHHS-CH-----HH----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hhccCc-cH-----HH----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 000000 00 00 0123457899999999999999999999999999998876554
No 86
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.1e-43 Score=349.40 Aligned_cols=251 Identities=18% Similarity=0.211 Sum_probs=197.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||++....+...++.+++|+..... .......+.+|+.+|+.++||||+++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 468999999999999999999875444455667777665432 223446688999999999999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred CEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCc
Confidence 7899999999999999999542 35899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------- 237 (327)
T 3a62_A 168 CKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK---------- 237 (327)
T ss_dssp C----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC----------
T ss_pred ccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC----------
Confidence 8764322 2344578999999999999899999999999999999999999998766544332221110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
..++...+.++.+|+.+||..||.+|| ++.++++
T Consensus 238 --------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 --------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 012344568899999999999999999 7788876
No 87
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.9e-44 Score=350.56 Aligned_cols=267 Identities=20% Similarity=0.330 Sum_probs=213.9
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
+.....++|...+.||+|+||.||+|...+ .....+.+++|+............+.+|+.+++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 334456789999999999999999998542 123445555665544334445567899999999999999999999987
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRS-------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
.. +..++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 99 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 99 QG--QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 173 (322)
T ss_dssp SS--SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECT
T ss_pred cC--CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcC
Confidence 65 78899999999999999986421 1245799999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHh
Q 011995 320 DFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLV 394 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~ 394 (473)
++.+||+|||++........ ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 253 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 99999999999976643321 23355788999999999999999999999999999999 89999876654433222
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
.... ....+..++..+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 254 ~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGG-----------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCC-----------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1100 001233556789999999999999999999999999998754
No 88
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=377.26 Aligned_cols=254 Identities=16% Similarity=0.271 Sum_probs=204.8
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEecc
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~ 261 (473)
.||+|+||.||+|.+.... ....+++|+.+........+.|.+|+++|+.++|||||++++++.. +.++|||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---~~~~lv~E~~~ 418 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAG 418 (613)
T ss_dssp EEEECSSSEEEEEEEECSS-CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---SSEEEEEECCT
T ss_pred EEecCCCcEEEEEEEecCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---CCeEEEEEeCC
Confidence 7999999999999875332 2344555555444445567889999999999999999999999865 46899999999
Q ss_pred CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc--
Q 011995 262 HGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI-- 339 (473)
Q Consensus 262 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~-- 339 (473)
+|+|.+++.. ....+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++.......
T Consensus 419 ~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 419 GGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp TCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred CCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 9999999954 3456999999999999999999999999 99999999999999999999999999987643321
Q ss_pred ---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 340 ---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 340 ---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+... .
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----------------~ 556 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----------------K 556 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT-----------------C
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 12234578999999999999999999999999999998 99999887655543333211 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
...++..++.++.+||.+||..||++||++.+|++.|+.+....+.
T Consensus 557 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 557 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 1123445678899999999999999999999999999987655443
No 89
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-43 Score=337.07 Aligned_cols=254 Identities=19% Similarity=0.320 Sum_probs=208.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|...++ ..+++|+. .......+.+.+|++++..++||||+++++++... +..+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~----~~vaiK~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNK----DKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--APIC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTT----EEEEEEEE--CTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSCE
T ss_pred hheeeeeEecCCCceeEEEEEecCC----CeEEEEEc--cccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccC--CCeE
Confidence 5788899999999999999997543 23444444 33334457899999999999999999999999765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 154 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 154 (267)
T ss_dssp EEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccc
Confidence 999999999999999653 346899999999999999999999999 999999999999999999999999999866
Q ss_pred CCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~------------ 222 (267)
T 3t9t_A 155 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------ 222 (267)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC------------
T ss_pred ccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC------------
Confidence 4322 223455678999999999999999999999999999999 899998766544332221100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
....+...+..+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus 223 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 -----RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0111334457899999999999999999999999999998754
No 90
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.5e-43 Score=343.67 Aligned_cols=268 Identities=19% Similarity=0.347 Sum_probs=207.6
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|...+.||+|+||.||+|.+..+......+++|+..... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34577889999999999999999876655566666677665443 33445779999999999999999999999876532
Q ss_pred C---ceEEEEEeccCCChhhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 251 D---QRMLIYERLFHGSLDRLIYGR---SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 251 ~---~~~lV~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
. ..++||||+++|+|.+++... .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEE
Confidence 2 469999999999999998432 23457999999999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~- 266 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH- 266 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC-
Confidence 99999998664332 123355778999999999999999999999999999999 999998765544332221100
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....+..++..+.+++.+||..||.+|||+.+|++.|+++....
T Consensus 267 ----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 267 ----------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ----------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01123445678999999999999999999999999999987654
No 91
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.9e-44 Score=362.21 Aligned_cols=251 Identities=15% Similarity=0.230 Sum_probs=190.9
Q ss_pred hcccccC-cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh-CCCCCcccceeeeec--CC
Q 011995 174 CHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS-LQHPNLCKLLGFHAR--DG 249 (473)
Q Consensus 174 ~~~f~~~-~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~g~~~~--~~ 249 (473)
.++|... +.||+|+||+||+|.... +.+.+++|+... ...+.+|++++.+ .+||||+++++++.. .+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~---~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECC---CCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 4567665 689999999999998654 345556665541 2567789988754 589999999998864 22
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEEe
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKLS 326 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl~ 326 (473)
...+||||||+++|+|.+++... ....+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEE
Confidence 36789999999999999999653 2346999999999999999999999999 999999999999997 7899999
Q ss_pred ccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH----HhHhhhccccc
Q 011995 327 GYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE----RNLVKWSRPFL 401 (473)
Q Consensus 327 DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~----~~~~~~~~~~~ 401 (473)
|||+++..... .....++|+.|+|||++.+..++.++|||||||++|||++|..||........ ...+....
T Consensus 207 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~--- 283 (400)
T 1nxk_A 207 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--- 283 (400)
T ss_dssp CCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC---
T ss_pred ecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc---
Confidence 99999876433 23456789999999999999999999999999999999999999976543210 11111000
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..+.......++.++.+||.+||+.||.+|||+.+|++.
T Consensus 284 -----------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 284 -----------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -----------CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----------ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000001123456889999999999999999999999985
No 92
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.5e-43 Score=340.97 Aligned_cols=265 Identities=15% Similarity=0.185 Sum_probs=200.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||+||+|....+ .+.+++|+..... .......+.+|+.++++++||||+++++++.++ +..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRET---HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTT---CCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCC---CceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC--CEE
Confidence 5789999999999999999986543 4556677666543 334457788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++ +|.+.+.. ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 77 ~lv~e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EEEEECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 999999975 66665543 2356999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCC-CCCChHHHHhHhhhcccccccc--ccc
Q 011995 334 IPET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNL-DSRHPKEERNLVKWSRPFLADD--CRL 407 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~-~~~~~~~~~~~~~~~~~~~~~~--~~~ 407 (473)
.... ......+|+.|+|||++.+.. ++.++|||||||++|||++|..|| ...........+.......... ...
T Consensus 151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred cCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 6432 234457799999999997766 899999999999999999888775 4433333222221100000000 000
Q ss_pred cccc---------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 408 SLIM---------DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 408 ~~~~---------~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.... ............+.++.+|+.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 000011123356788999999999999999999999986
No 93
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-43 Score=357.84 Aligned_cols=252 Identities=17% Similarity=0.269 Sum_probs=197.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||+|+...+ .+.+++|+.... ........+.+|..++.++ +|||||++++++.+.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~---~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~-- 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKT---DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-- 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS--
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCC---CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC--
Confidence 46899999999999999999997654 355666666543 2333446688999999887 899999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+||||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecce
Confidence 7899999999999999998543 46999999999999999999999999 99999999999999999999999999
Q ss_pred CcccC--CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIP--ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~--~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++... .......++|+.|+|||++.+..++.++|||||||++|||++|+.||............. ......
T Consensus 200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~-------~~~~~~ 272 (396)
T 4dc2_A 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-------EDYLFQ 272 (396)
T ss_dssp CBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CC-------HHHHHH
T ss_pred eeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhh-------HHHHHH
Confidence 98632 223455689999999999999999999999999999999999999996432211100000 000000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
.+... ...++...+.++.+||.+||+.||.+||++
T Consensus 273 ~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 273 VILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHhcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 00011 112355567889999999999999999996
No 94
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.8e-43 Score=352.72 Aligned_cols=279 Identities=19% Similarity=0.237 Sum_probs=212.6
Q ss_pred CCCCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC----
Q 011995 159 TGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---- 234 (473)
Q Consensus 159 ~~~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---- 234 (473)
......+++.+.....++|.+.+.||+|+||+||+|....+ .+.+++|+.. ........+..|+.++..+.
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~--~~~~~~~~~~~e~~~l~~l~~~~~ 93 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDN---KKYYAVKVVR--NIKKYTRSAKIEADILKKIQNDDI 93 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEC--SCHHHHHHHHHHHHHHHHTCCCST
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCC---CeEEEEEEec--cchhhhhhhHHHHHHHHHhcccCC
Confidence 44455566666666788999999999999999999996543 3445555543 33445567888999999996
Q ss_pred -CCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCC
Q 011995 235 -HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTA 313 (473)
Q Consensus 235 -HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~ 313 (473)
||||+++++++... +..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~--~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~ 166 (360)
T 3llt_A 94 NNNNIVKYHGKFMYY--DHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPE 166 (360)
T ss_dssp TGGGBCCEEEEEEET--TEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGG
T ss_pred CCCCeecccceeeEC--CeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcc
Confidence 99999999999876 7899999999 899999997543 345999999999999999999999999 999999999
Q ss_pred ceeeCC-------------------------CCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHH
Q 011995 314 NIQIDK-------------------------DFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSF 368 (473)
Q Consensus 314 NILl~~-------------------------~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSl 368 (473)
|||++. ++.+||+|||++..... ......+|+.|+|||++.+..++.++|||||
T Consensus 167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-YHGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC-CCcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 999975 78999999999986543 2345678999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc--------ccccccccccCCCCC--------------------
Q 011995 369 GIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC--------RLSLIMDPQLKGRFP-------------------- 420 (473)
Q Consensus 369 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~-------------------- 420 (473)
||++|||++|+.||......+....+........... .........+...++
T Consensus 246 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 325 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325 (360)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccc
Confidence 9999999999999988766554433322111100000 000000000000000
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 421 LKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 421 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......+.+|+.+||+.||.+|||+.|+|+
T Consensus 326 ~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 326 IIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 111267889999999999999999999985
No 95
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-43 Score=342.82 Aligned_cols=257 Identities=20% Similarity=0.343 Sum_probs=202.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh------hHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG------VKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
.++|+..+.||+|+||.||+|....+ .+.+++|+......... .+.+.+|+.++++++||||+++++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKD---KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTT---CCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred hccceehhccccCCceeEEEEEEcCC---ceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 36788899999999999999996543 34455665544322211 1678999999999999999999999854
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc-----
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS----- 322 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~----- 322 (473)
. .++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++. +|+||||||+|||++.++.
T Consensus 95 ~----~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~-~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 95 P----PRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp T----TEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSSS-CCBCSCCSGGGEEESCCCTTCSCC
T ss_pred C----CeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCCC-CeecCCCCcceEEEeccCCCCcee
Confidence 3 37999999999999988643 4579999999999999999999999873 3999999999999988776
Q ss_pred EEEeccCCCcccCCCCccCcccccccCChhhhh--cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 323 AKLSGYGCAGHIPETDISNSSVAAANLSVETLE--RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~--~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
+||+|||++..... ......+|+.|+|||.+. ...++.++|||||||++|||++|+.||..............
T Consensus 168 ~kl~Dfg~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---- 242 (287)
T 4f0f_A 168 AKVADFGLSQQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI---- 242 (287)
T ss_dssp EEECCCTTCBCCSS-CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH----
T ss_pred EEeCCCCccccccc-cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH----
Confidence 99999999975533 334567899999999983 44578999999999999999999999976543332111110
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
........++..++..+.+++.+||+.||.+|||+.+|++.|+++
T Consensus 243 ----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 ----------REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 011111223445668899999999999999999999999999875
No 96
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.7e-43 Score=353.43 Aligned_cols=247 Identities=14% Similarity=0.189 Sum_probs=205.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..... .....+.+.+|+.+|..++||||+++++++.+. .
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN--S 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT---CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCC---CCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC--C
Confidence 36899999999999999999996543 3455666654321 223456788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a 188 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFA 188 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccc
Confidence 899999999999999999643 35899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
...... .....+|+.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 189 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~------------- 254 (350)
T 1rdq_E 189 KRVKGR-TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK------------- 254 (350)
T ss_dssp EECSSC-BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-------------
T ss_pred eeccCC-cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 876433 345678999999999999999999999999999999999999998766554433222110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFE 450 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~ 450 (473)
..++...+.++.++|.+||+.||.+||+ +++|++
T Consensus 255 -----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 255 -----VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1124455688999999999999999998 888875
No 97
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=358.46 Aligned_cols=251 Identities=16% Similarity=0.264 Sum_probs=203.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|.+.+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.+|..++|||||++++++.+. +
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~---~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDT---KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE--E 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTT---CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--S
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCC---CCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--C
Confidence 36799999999999999999986543 4556666654321 223456788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+.+|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a 162 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIA 162 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEecccee
Confidence 89999999999999999954 346999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC-CccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 332 GHIPET-DISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 332 ~~~~~~-~~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.................
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-------- 234 (384)
T 4fr4_A 163 AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-------- 234 (384)
T ss_dssp EECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH--------
T ss_pred eeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh--------
Confidence 876443 3456689999999999964 4589999999999999999999999976443322222211000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-MRSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~ 450 (473)
....++..++..+.+||.+||+.||.+||+ +.+|++
T Consensus 235 -------~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 -------TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001234456688999999999999999998 777664
No 98
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-43 Score=356.13 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=205.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+.... .......+.+|+.+|..++||||+++++++.+. ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--~~~ 123 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKAT---GRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YEM 123 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--SEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCC---CCEEEEEEeccc-chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC--CEE
Confidence 56899999999999999999986543 344555555432 223456789999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC--CCcEEEeccCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK--DFSAKLSGYGCA 331 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~--~~~vkl~DFGla 331 (473)
++||||+++|+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||++
T Consensus 124 ~lv~E~~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a 198 (387)
T 1kob_A 124 VLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198 (387)
T ss_dssp EEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccc
Confidence 999999999999999853 2346999999999999999999999999 999999999999974 478999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+.........+.....
T Consensus 199 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~----------- 267 (387)
T 1kob_A 199 TKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW----------- 267 (387)
T ss_dssp EECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC-----------
T ss_pred eecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------
Confidence 8775443 2344789999999999998999999999999999999999999988765443332221100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........++.++.+||.+||+.||.+|||+.++++.
T Consensus 268 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 268 ---EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 01111123456889999999999999999999999974
No 99
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-43 Score=364.43 Aligned_cols=257 Identities=21% Similarity=0.374 Sum_probs=205.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|.+.++. . +++|.+.......+.|.+|+.+|++++||||+++++++.. +..
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~----~--vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~ 253 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTT----R--VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI 253 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTE----E--EEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCc----e--EEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---Cce
Confidence 467888899999999999999986532 2 3444444434456789999999999999999999999854 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... .+..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 254 ~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp EEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred EEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCcccee
Confidence 9999999999999999532 2345899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+...
T Consensus 330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~------------ 397 (452)
T 1fmk_A 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG------------ 397 (452)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT------------
T ss_pred cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC------------
Confidence 654322 22345678999999999999999999999999999999 99999887655433322211
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.....+..++..+.+||.+||+.||++|||+.+|++.|+.+.....
T Consensus 398 -----~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 398 -----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp -----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 0111244566889999999999999999999999999999875543
No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=343.80 Aligned_cols=255 Identities=23% Similarity=0.380 Sum_probs=197.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||+|.+.+ +.+++|+ +. .....+.+.+|+.++++++||||+++++++. +..+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~vavK~--~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWRA-----KDVAIKQ--IE-SESERKAFIVELRQLSRVNHPNIVKLYGACL----NPVC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETT-----EEEEEEE--CS-STTHHHHHHHHHHHHHHCCCTTBCCEEEBCT----TTTE
T ss_pred hHeeeeeEeecCCCceEEEEEECC-----eeEEEEE--ec-ChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc----CCcE
Confidence 578889999999999999998653 3334443 33 2345678999999999999999999999875 3479
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh---cCCCceeecCCCCCceeeCCCCc-EEEeccCC
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE---EGPFQAMYNEFSTANIQIDKDFS-AKLSGYGC 330 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~---~~~~~ivHrDlkp~NILl~~~~~-vkl~DFGl 330 (473)
+||||+++|+|.+++........+++..+..++.|++.||+|||+ ++ |+||||||+|||++.++. +||+|||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~---ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA---LIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC---CCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC---eecCCCChhHEEEeCCCCEEEEccccc
Confidence 999999999999999765444458899999999999999999999 66 999999999999998876 79999999
Q ss_pred CcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 331 AGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 331 a~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
+...... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||......... +.|... ..
T Consensus 153 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~---~~------ 220 (307)
T 2eva_A 153 ACDIQTH-MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWAVH---NG------ 220 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH--HHHHHH---TT------
T ss_pred ccccccc-cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH--HHHHHh---cC------
Confidence 9765432 23446899999999999999999999999999999999999999764332211 111000 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.....+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 221 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 221 ----TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ----CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ----CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111233456789999999999999999999999999998875543
No 101
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.5e-43 Score=344.56 Aligned_cols=265 Identities=15% Similarity=0.214 Sum_probs=199.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||+||+|...+ ++.+++|+..... .......+.+|+++++.++||||+++++++.+. ..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQ----GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE--RC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETT----SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS--SC
T ss_pred HhhhHhhhhccCCCCeEEEEEEECC----CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC--CE
Confidence 5789999999999999999998644 3445566554432 233456788999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++ +|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 167 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLAR 167 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCce
Confidence 9999999974 888888543 346999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-ccccccc----
Q 011995 333 HIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-RPFLADD---- 404 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~---- 404 (473)
..... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+... .......
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp ETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred ecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence 76432 3344578999999999976 45899999999999999999999999876554433322110 0000000
Q ss_pred cccccc-------cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 CRLSLI-------MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ~~~~~~-------~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...... .............+.++.+|+.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000 0000000011234578899999999999999999999987
No 102
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-43 Score=348.48 Aligned_cols=264 Identities=20% Similarity=0.339 Sum_probs=208.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|...+.||+|+||.||+|....+... ..++++...........+.+.+|++++.++ +||||+++++++... +..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEE-EEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET--TEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcc-cceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC--Cce
Confidence 6788999999999999999986543321 122344444333445567799999999999 999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCC
Confidence 99999999999999996532 2346999999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcc
Q 011995 321 FSAKLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 398 (473)
+.+||+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+...
T Consensus 179 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~- 257 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 257 (327)
T ss_dssp GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-
T ss_pred CeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-
Confidence 999999999987543221 223355788999999998889999999999999999998 99999877654433222110
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.....+..++..+.+|+.+||..||.+|||+.++++.|+++..++..
T Consensus 258 ----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 258 ----------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp ----------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred ----------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 01112345568899999999999999999999999999998877654
No 103
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2e-43 Score=342.47 Aligned_cols=253 Identities=18% Similarity=0.254 Sum_probs=200.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+ ...+++|+..........+.+.+|+++++.++||||+++++++.+. ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSS---GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY--HNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTT---CCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SEE
T ss_pred hhheeecceeccCCCeEEEEEEEccC---CceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC--CeE
Confidence 46799999999999999999986543 3455566665544455568899999999999999999999999765 789
Q ss_pred EEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccC
Q 011995 254 MLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYG 329 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFG 329 (473)
++||||+++|+|.+++... .....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg 172 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFG 172 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeee
Confidence 9999999999999988542 12356999999999999999999999999 9999999999999 456889999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++....... .....+++.|+|||.+. ..++.++|||||||++|||++|+.||.+.........+.+..+.....
T Consensus 173 ~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~---- 247 (285)
T 3is5_A 173 LAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE---- 247 (285)
T ss_dssp CCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC-----
T ss_pred cceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc----
Confidence 998764432 34457889999999985 568999999999999999999999998876555443333221111000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....+.++.+|+.+||+.||.+|||+.|+++
T Consensus 248 -----------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 -----------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -----------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1113577889999999999999999999986
No 104
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6e-44 Score=355.76 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=204.4
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
...++|...+.||+|+||.||+|+...+ ++.+++|+..... .......+..|..++..+ +||||+++++++.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~ 90 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKT---NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 90 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTT---TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCC---CCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC
Confidence 4567899999999999999999997543 3556666654321 123456678899999887 999999999999876
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
+.+|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 91 --~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 91 --ENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp --SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEC
Confidence 7899999999999999999542 36899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 329 GCAGHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 329 Gla~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
|+++.... ......++|+.|+|||++.+..++.++|||||||++|||++|..||.+.........+....
T Consensus 163 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-------- 234 (345)
T 1xjd_A 163 GMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-------- 234 (345)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------
T ss_pred hhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------
Confidence 99986432 23455688999999999999999999999999999999999999998776554433332111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMR-SIF 449 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil 449 (473)
..++...+.++.+||.+||+.||.+||++. +|+
T Consensus 235 ----------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 ----------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ----------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 112344568899999999999999999997 665
No 105
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.3e-44 Score=345.58 Aligned_cols=262 Identities=19% Similarity=0.280 Sum_probs=200.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCe--e--eeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDAS--T--SKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~ 249 (473)
.++|...+.||+|+||+||+|....... . ...+++|+... ......+.+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK-AHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG- 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG-GGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc-ccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC-
Confidence 3678899999999999999998654321 1 23344444322 2334457799999999999999999999999765
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc-------
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS------- 322 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~------- 322 (473)
+..++||||+++|+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 85 -~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 -DENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp -TCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred -CCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccc
Confidence 7789999999999999999653 334899999999999999999999999 999999999999998877
Q ss_pred -EEEeccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcC-CCCCCCCChHHHHhHhhhccc
Q 011995 323 -AKLSGYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTG-RKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 323 -vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~ 399 (473)
+||+|||++...... ....+++.|+|||.+.+ ..++.++|||||||++|||++| .+||............... .
T Consensus 159 ~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~-~ 235 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK--DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-H 235 (289)
T ss_dssp EEEECCCCSCTTTSCH--HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-C
T ss_pred eeeeccCcccccccCc--cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc-C
Confidence 999999998765332 23457889999999987 6689999999999999999995 5555544433322211110 0
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCcc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSST 464 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~~ 464 (473)
.++...+.++.+|+.+||+.||.+|||+.++++.|+++.....+...
T Consensus 236 ------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 236 ------------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp ------------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 01122245688999999999999999999999999999887666544
No 106
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-43 Score=341.98 Aligned_cols=251 Identities=20% Similarity=0.302 Sum_probs=203.3
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|+..+.||+|+||.||+|....+. ..+++|+..... .......+.+|+.+++.++||||+++++++.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSK---FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTC---CEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCC---cEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC--
Confidence 3578999999999999999999865543 344555543221 122346788999999999999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCE
T ss_pred CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccc
Confidence 7899999999999999998543 45899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 331 AGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 331 a~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
+............+++.|+|||.+.+..++.++||||||+++|||++|..||...........+....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 223 (279)
T 3fdn_A 156 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE------------ 223 (279)
T ss_dssp ESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC------------
T ss_pred cccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC------------
Confidence 87766555566688999999999999999999999999999999999999998766554433332111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
..++...+..+.+|+.+||+.||.+|||+.||++.-
T Consensus 224 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 ------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 112334567889999999999999999999999753
No 107
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.6e-43 Score=352.22 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=205.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
..++|...+.||+|+||.||+|.... +.+.+++|+..... .......+..|..++..+ +||||+++++++.+.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~- 93 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM- 93 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETT---EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS-
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC-
Confidence 35789999999999999999998543 55667777765421 223456788999999988 899999999998876
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+.+|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 94 -~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG 166 (353)
T 2i0e_A 94 -DRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG 166 (353)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCT
T ss_pred -CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCC
Confidence 7899999999999999999542 35999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+....
T Consensus 167 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--------- 237 (353)
T 2i0e_A 167 MCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--------- 237 (353)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------
T ss_pred cccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC---------
Confidence 9986432 23345688999999999999999999999999999999999999998776554433222110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 451 (473)
..++...+.++.+||.+||..||.+||+ +++|++.
T Consensus 238 ---------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ---------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ---------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1234456688999999999999999995 5777653
No 108
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.6e-43 Score=344.99 Aligned_cols=259 Identities=19% Similarity=0.282 Sum_probs=197.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh--CCCCCcccceeeeecC--C
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLLGFHARD--G 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~~--~ 249 (473)
.++|...+.||+|+||+||+|.+.+ +.+++|+... .....+.+|.+++.. ++||||+++++++... .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~ 77 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQG-----ENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHS 77 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETT-----EEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETT
T ss_pred cCcEEEEEeeccCCCcEEEEEEECC-----EEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCC
Confidence 5689999999999999999998632 3445555432 344566677777776 7999999999987643 2
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceeecCCCCCceeeCCCC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH--------EEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
....++||||+++|+|.+++.. ..+++..+..++.||+.||+||| +.+ |+||||||+|||++.++
T Consensus 78 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 78 STQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTS
T ss_pred CceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCC
Confidence 2568999999999999999932 36999999999999999999999 777 99999999999999999
Q ss_pred cEEEeccCCCcccCCCC------ccCcccccccCChhhhhcC------CCCCcCCchHHHHHHHHHHcC----------C
Q 011995 322 SAKLSGYGCAGHIPETD------ISNSSVAAANLSVETLERG------LLTPKSNVWSFGIVLLELLTG----------R 379 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~------~~~~~~t~~y~aPE~~~~~------~~s~~sDvwSlGvvl~elltG----------~ 379 (473)
.+||+|||++....... .....+|+.|+|||++.+. .++.++|||||||++|||++| .
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 99999999997653322 1234789999999999876 345789999999999999999 8
Q ss_pred CCCCCCChHHHH-hHhhhcccccccccccccccccccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 380 KNLDSRHPKEER-NLVKWSRPFLADDCRLSLIMDPQLK-GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 380 ~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.||......... ...... .... ...+.+. ..++...+..+.+|+.+||+.||.+|||+.+|++.|++++
T Consensus 231 ~pf~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDMRKV--VCVD------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CTTTTTSCSSCCHHHHHHH--HTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred ccccccCCCCcchhhhhHH--Hhcc------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 888553221110 000000 0000 0011111 1123467889999999999999999999999999999874
No 109
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.8e-44 Score=358.59 Aligned_cols=275 Identities=14% Similarity=0.135 Sum_probs=205.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCe--eeeEEEEEEEecCCCC----------hhhHhHHHHHHHHHhCCCCCcccc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPSS----------QGVKEFINDVNTLASLQHPNLCKL 241 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~Ei~~l~~l~HpnIv~l 241 (473)
.++|.+.+.||+|+||.||+|.+..+.. ..+.+++|+....... .....+..|+..+..++|+||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 5689999999999999999999866432 2355666665543210 001234456667778889999999
Q ss_pred eeeeecCC--CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-
Q 011995 242 LGFHARDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID- 318 (473)
Q Consensus 242 ~g~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~- 318 (473)
++++.... ....+|||||+ +++|.+++... ...+++..+..|+.||+.||+|||+++ |+||||||+||||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99987642 24589999999 99999999653 356999999999999999999999999 99999999999999
Q ss_pred -CCCcEEEeccCCCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChH
Q 011995 319 -KDFSAKLSGYGCAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388 (473)
Q Consensus 319 -~~~~vkl~DFGla~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~ 388 (473)
.++.+||+|||+++.+.... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999997654221 12345899999999999999999999999999999999999999853322
Q ss_pred HHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
......... .. ...+..+.++.+. ...++.++.+|+..||..||.+||++.+|++.|+++......
T Consensus 268 ~~~~~~~~~--~~--~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 268 PKYVRDSKI--RY--RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHH--HH--HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH--Hh--hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 211111000 00 0011112222111 123457899999999999999999999999999998766544
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-42 Score=337.49 Aligned_cols=259 Identities=15% Similarity=0.270 Sum_probs=209.2
Q ss_pred cccccCc-ceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDR-CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~-~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|.+.. .||+|+||.||+|.+.... ....+++|+..........+.+.+|++++..++||||+++++++.. +..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCC-CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC---CCc
Confidence 4566655 9999999999999865322 2345556666554455567889999999999999999999999843 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999999953 3456999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...........+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~---------- 229 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG---------- 229 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT----------
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC----------
Confidence 64332 122345788999999998889999999999999999998 99999876654433222211
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....++..++.++.+++.+||..||.+||++.++++.|+.+....
T Consensus 230 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 230 -------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 011224456688999999999999999999999999999876443
No 111
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7e-43 Score=339.08 Aligned_cols=264 Identities=17% Similarity=0.264 Sum_probs=198.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|.... .+.+++|+..... .......+.+|+.+++.++||||+++++++... +..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNY----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--KRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETT----SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS--SCE
T ss_pred ccchhhhhcccCCCEEEEEEEcCC----CCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC--CeE
Confidence 578899999999999999998632 3445566554432 222346788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++ +|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 76 ~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARA 149 (288)
T ss_dssp EEEEECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred EEEEEecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccc
Confidence 999999975 999988543 356899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-ccccccc-cccc
Q 011995 334 IPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-RPFLADD-CRLS 408 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 408 (473)
.... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.........+... ....... ....
T Consensus 150 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp HCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhh
Confidence 5432 23445779999999999764 5899999999999999999999999887655443322110 0000000 0000
Q ss_pred c--cccccc-------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 409 L--IMDPQL-------KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 409 ~--~~~~~l-------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. ..++.. ...+....+.++.+|+.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 000000 01122345688999999999999999999999986
No 112
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.1e-43 Score=361.40 Aligned_cols=257 Identities=14% Similarity=0.141 Sum_probs=206.7
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
++....++|+..+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++..++|||||++++++.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~---~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 139 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCC---CcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3344568899999999999999999996543 3455666654311 1223356889999999999999999999998
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
+. ..+||||||+++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+
T Consensus 140 ~~--~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~ 210 (410)
T 3v8s_A 140 DD--RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLA 210 (410)
T ss_dssp CS--SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred EC--CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEe
Confidence 76 7899999999999999999542 4899999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC---ccCcccccccCChhhhhcCC----CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 327 GYGCAGHIPETD---ISNSSVAAANLSVETLERGL----LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 327 DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~~----~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|||+++...... ....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+.....
T Consensus 211 DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~ 290 (410)
T 3v8s_A 211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 290 (410)
T ss_dssp CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred ccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc
Confidence 999998765442 23568999999999997765 78999999999999999999999988766554433321100
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
. +.......++.++.+||.+||..+|.+ ||+++||++.
T Consensus 291 ~--------------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 S--------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp H--------------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred c--------------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 000001235688999999999999988 9999999875
No 113
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.2e-43 Score=337.04 Aligned_cols=256 Identities=21% Similarity=0.335 Sum_probs=207.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|...++ ..+++|+. .......+.+.+|+++++.++||||+++++++.. +..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 82 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGH----TKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPI 82 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTT----EEEEEEEE--CTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCC----cEEEEEEe--cCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC---CCc
Confidence 46788999999999999999987543 23444443 3334456789999999999999999999998853 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 83 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158 (279)
T ss_dssp EEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCccccc
Confidence 9999999999999999532 1236899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~------------ 226 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG------------ 226 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT------------
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc------------
Confidence 654332 23345678999999998889999999999999999999 99999876654433222111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
.....+..++..+.+++.+||..||++|||+.+|++.|+++....
T Consensus 227 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 227 -----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 001123345678999999999999999999999999999987543
No 114
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.3e-43 Score=349.76 Aligned_cols=252 Identities=17% Similarity=0.260 Sum_probs=198.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||+|+...+ .+.+++|+..... .......+.+|+.++.++ +||||+++++++.+.
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-- 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKT---DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-- 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred hhheEEEEEEEecCCeEEEEEEECCC---CCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC--
Confidence 36799999999999999999996543 4566677665432 334456788999999988 899999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~ 156 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGM 156 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccc
Confidence 7899999999999999999542 36999999999999999999999999 99999999999999999999999999
Q ss_pred CcccC--CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIP--ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~--~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++... .......++|+.|+|||++.+..++.++|||||||++|||++|+.||.............. .....
T Consensus 157 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~-------~~~~~ 229 (345)
T 3a8x_A 157 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-------DYLFQ 229 (345)
T ss_dssp CBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH-------HHHHH
T ss_pred cccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH-------HHHHH
Confidence 98642 2234456889999999999999999999999999999999999999965321110000000 00000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
.+.... ..++...+.++.+|+.+||+.||.+||++
T Consensus 230 ~i~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 230 VILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHcCC--CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 000111 12344567889999999999999999995
No 115
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-43 Score=365.61 Aligned_cols=248 Identities=17% Similarity=0.238 Sum_probs=196.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||+|.... .+..+++|+.... ........+.+|+.++..++||||+++++++... +
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--D 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET--T
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcC---CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC--C
Confidence 4689999999999999999998544 3455666665532 2334456788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
.++|||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+ ||||||||+||||+.++.+||+|||+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred EEEEEEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCC
Confidence 89999999999999999854 3468999999999999999999998 88 99999999999999999999999999
Q ss_pred CcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 296 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---------- 365 (446)
T 4ejn_A 296 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------- 365 (446)
T ss_dssp CCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----------
T ss_pred ceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC----------
Confidence 9864322 3345688999999999999999999999999999999999999998776554433332111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
..++...+.++.+||.+||+.||.+|| ++.|+++
T Consensus 366 --------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 366 --------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 112444568899999999999999999 9999986
No 116
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=350.51 Aligned_cols=251 Identities=17% Similarity=0.224 Sum_probs=188.0
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+.... ...+.+.+|++++.+++||||+++++++... +.
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 122 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGT---QKPYALKVLKKT---VDKKIVRTEIGVLLRLSHPNIIKLKEIFETP--TE 122 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCC---CcEEEEEEeccc---hhHHHHHHHHHHHHhCCCCCCcceeeeEecC--Ce
Confidence 467899999999999999999997543 344556655432 2346688999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl~DFG 329 (473)
.++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 123 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg 196 (349)
T 2w4o_A 123 ISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFG 196 (349)
T ss_dssp EEEEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred EEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCc
Confidence 9999999999999999953 346899999999999999999999999 999999999999975 8899999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhccccccccccc
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 407 (473)
++....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||........ ...+... .
T Consensus 197 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~------~--- 267 (349)
T 2w4o_A 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC------E--- 267 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT------C---
T ss_pred cccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC------C---
Confidence 998764432 2345789999999999998999999999999999999999999976554331 1111100 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+....+.++.+|+.+||+.||.+|||+.++++.
T Consensus 268 -----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 268 -----YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -----CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111223456789999999999999999999999873
No 117
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-44 Score=355.92 Aligned_cols=248 Identities=17% Similarity=0.245 Sum_probs=201.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|.+.+.||+|+||.||+|....+ ...+++|+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKT---QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP--T 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCC---CCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--C
Confidence 36899999999999999999996443 3455666554321 123346788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+ +|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s 155 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLS 155 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred EEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccc
Confidence 899999999 78999988543 46999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....+|+.|+|||++.+..+ +.++|||||||++|+|++|..||.+........ .
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~ 219 (336)
T 3h4j_B 156 NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------K 219 (336)
T ss_dssp BTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------C
T ss_pred eeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------H
Confidence 8765443 345678999999999988776 689999999999999999999997643222110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.. ....++...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 220 i~~--~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 220 VNS--CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCS--SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHc--CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000 0112344566889999999999999999999999874
No 118
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=339.72 Aligned_cols=271 Identities=17% Similarity=0.193 Sum_probs=202.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC----CChhhHhHHHHHHHHHhCC---CCCcccceeee
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQ---HPNLCKLLGFH 245 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~ 245 (473)
..++|+..+.||+|+||+||+|... ...+.+++|+..... .......+.+|+.+++.++ ||||+++++++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDP---HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECT---TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 4678999999999999999999843 344566666655432 1222356778888877774 99999999998
Q ss_pred ecCCCC---ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 246 ARDGSD---QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 246 ~~~~~~---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
.....+ ..++||||+. |+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCC
Confidence 765322 5799999996 59999996542 345999999999999999999999999 999999999999999999
Q ss_pred EEEeccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 323 AKLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 323 vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
+||+|||++....... .....+|+.|+|||++.+..++.++|||||||++|||++|++||.+.........+.......
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238 (308)
T ss_dssp EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999998765432 344578999999999999999999999999999999999999998877655443332111000
Q ss_pred ccccccc------cccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLS------LIMDPQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~------~~~~~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....... ....+... .......+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 00000000 00112456788999999999999999999999863
No 119
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.9e-44 Score=365.79 Aligned_cols=261 Identities=14% Similarity=0.160 Sum_probs=207.9
Q ss_pred HHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeee
Q 011995 168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFH 245 (473)
Q Consensus 168 ~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~ 245 (473)
.++....++|+..+.||+|+||+||+|+...+ .+.+++|+..... .......+.+|+.++..++||||+++++++
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNA---DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCC---CcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 34445578999999999999999999997654 3455666654311 122234588999999999999999999999
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEE
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl 325 (473)
.+. +.+|||||||++|+|.+++... ...+++..+..++.||+.||.|||+.+ ||||||||+||||+.++.+||
T Consensus 144 ~~~--~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL 216 (437)
T 4aw2_A 144 QDD--NNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRL 216 (437)
T ss_dssp ECS--SEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEE
T ss_pred eeC--CEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEE
Confidence 876 7899999999999999999642 356999999999999999999999999 999999999999999999999
Q ss_pred eccCCCcccCCCC---ccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 326 SGYGCAGHIPETD---ISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 326 ~DFGla~~~~~~~---~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
+|||+++...... ....+||+.|+|||++. ...++.++|||||||++|||++|+.||.+....+....+...
T Consensus 217 ~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 296 (437)
T 4aw2_A 217 ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296 (437)
T ss_dssp CCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred cchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhc
Confidence 9999997664432 23357899999999997 456899999999999999999999999887665544333211
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
.. . ..-+ .....++.++.+||.+||..+|.+ |++++|+++.
T Consensus 297 ~~------~---~~~p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 297 KE------R---FQFP----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HH------H---CCCC----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cc------c---ccCC----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 0 0000 011235688999999999888888 9999999874
No 120
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.3e-43 Score=336.84 Aligned_cols=247 Identities=17% Similarity=0.253 Sum_probs=181.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+.+++.++||||+++++++.+. +.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTT---TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK--DE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTT---TCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS--SC
T ss_pred cceEEEEEEEcCCCEEEEEEEECC---CCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--Ce
Confidence 579999999999999999998433 34556666655432 234456789999999999999999999999865 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+ +++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred EEEEehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccce
Confidence 99999999 67888887543 46999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... .....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||...........+....
T Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------------ 228 (275)
T 2eue_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------------ 228 (275)
T ss_dssp --------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------------
T ss_pred eccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 665433 244568999999999987765 789999999999999999999998766544333222111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++...+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 229 ------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 01233456789999999999999999999999863
No 121
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-43 Score=355.28 Aligned_cols=267 Identities=20% Similarity=0.290 Sum_probs=206.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|....+ ...+++|+............+.+|+.+++.++||||+++++++..+ +..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPS---GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT---CCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET--TEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCC---CcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC--CEE
Confidence 36799999999999999999996543 3556666666554555667899999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.
T Consensus 107 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 180 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSG 180 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCc
Confidence 9999999999999999543 3589999999999999999999996 7 9999999999999999999999999997
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc-------------
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP------------- 399 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~------------- 399 (473)
...........+|+.|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 181 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred ccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 6544444556789999999999999999999999999999999999999987665443222110000
Q ss_pred ------cccc-------ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 ------FLAD-------DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ------~~~~-------~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+..+ ...+..+.............+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 000000000111111122356789999999999999999999999874
No 122
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2e-43 Score=349.17 Aligned_cols=285 Identities=18% Similarity=0.250 Sum_probs=212.1
Q ss_pred hcccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|.+.. +....+.+++|+.... .....+.+.+|++++++++|+||+++++++...+...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 3678999999999999999998643 2334556666655432 3344567899999999999999999999988665578
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999999999999642 235899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
...... .....++..|+|||.+.+..++.++|||||||++|||++|..||.......... ..+... .......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~-~~~~~~~ 253 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM-MGCERD-VPALSRL 253 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-CC-----CCHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh-cccccc-cccHHHH
Confidence 764332 123356778999999999889999999999999999999999987533221110 000000 0000011
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCcccc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSSTVR 466 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~~~~ 466 (473)
............+..++..+.+|+.+||+.||.+|||+.+|++.|+.+..........+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 312 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHA 312 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----------
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccccc
Confidence 11112222223355667889999999999999999999999999999876665544433
No 123
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.9e-43 Score=354.89 Aligned_cols=268 Identities=14% Similarity=0.215 Sum_probs=197.0
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG 249 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~ 249 (473)
...++|+..+.||+|+||.||+|....+ ++.+++|+.... ........+.+|+.++..+. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRT---GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTT---CCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCC---CCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 3567899999999999999999985443 445556655332 23445677889999999997 999999999998765
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...+|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCc
Confidence 568999999996 699999854 35899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC-----------------------CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCC
Q 011995 330 CAGHIPET-----------------------DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSR 385 (473)
Q Consensus 330 la~~~~~~-----------------------~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~ 385 (473)
+++.+... .....++|++|+|||++.+ ..++.++|||||||++|||++|++||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99765321 1234578999999999976 56899999999999999999999999987
Q ss_pred ChHHHHhHhhhccccccccccccccc------------------ccccCCCC------------CHHHHHHHHHHHHHhc
Q 011995 386 HPKEERNLVKWSRPFLADDCRLSLIM------------------DPQLKGRF------------PLKAARTVADIALRCL 435 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~~~~------------~~~~~~~l~~li~~cl 435 (473)
........+......... ..+..+. .......+ ...++.++.+|+.+||
T Consensus 235 ~~~~~~~~i~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 235 STMNQLERIIGVIDFPSN-EDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp SHHHHHHHHHHHHCCCCH-HHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCCCCH-HHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 765554433211000000 0000000 00000000 1134578999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 011995 436 QKEPSERPTMRSIFEE 451 (473)
Q Consensus 436 ~~dP~~RPt~~eil~~ 451 (473)
+.||.+|||+.|+++.
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999976
No 124
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.1e-43 Score=369.17 Aligned_cols=257 Identities=21% Similarity=0.360 Sum_probs=209.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|.+.++. .+++|+. .......+.|.+|+++|++++|+|||++++++.. +..
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~----~vavK~~--~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~ 336 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTT----RVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI 336 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTE----EEEEEEE--CTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCc----eEEEEEe--CCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee---ccc
Confidence 467888899999999999999986532 2444444 3333446789999999999999999999999854 568
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+|||||+.+|+|.++|... ....+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++.
T Consensus 337 ~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred eEeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 9999999999999999542 2345899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+...
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~------------ 480 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG------------ 480 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT------------
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC------------
Confidence 65332 123345678999999999999999999999999999999 99999887655443322211
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
.....+..++..+.+||.+||+.||++|||+.+|++.|+.+.....
T Consensus 481 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 481 -----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 0111234566889999999999999999999999999999875443
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.4e-42 Score=342.38 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=205.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----hhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----QGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+....... ...+.+.+|+.++..++||||+++++++.+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKST---GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hccEEEeeEeeecCCEEEEEEEECCC---CeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 46799999999999999999996543 345566665543221 1357799999999999999999999999766
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC----cEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF----SAK 324 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~vk 324 (473)
...++||||+++++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+|
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~k 159 (321)
T 2a2a_A 88 --TDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIK 159 (321)
T ss_dssp --SEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEE
T ss_pred --CEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEE
Confidence 789999999999999999954 346899999999999999999999999 99999999999999887 799
Q ss_pred EeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 325 LSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 325 l~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+|||++...... ......+|+.|+|||.+.+..++.++|||||||++|||++|..||.+....+....+......
T Consensus 160 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--- 236 (321)
T 2a2a_A 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--- 236 (321)
T ss_dssp ECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC---
T ss_pred EccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc---
Confidence 9999999876543 234557899999999999999999999999999999999999999876654433322211000
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.++. +....+..+.+|+.+||..||.+|||+.++++.
T Consensus 237 -------~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 -------FDEE----FFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -------CCHH----HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -------cChh----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 012345778999999999999999999999873
No 126
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-43 Score=348.48 Aligned_cols=261 Identities=16% Similarity=0.164 Sum_probs=201.4
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC----CCChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
++....++|...+.||+|+||.||+|....+ .+.+++|+.... ......+.+.+|+.+++.++||||++++++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 96 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQT---RAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV 96 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTT---CCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCC---CceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehh
Confidence 3456678899999999999999999986543 344556655432 133456789999999999999999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCC-------------------------------------CCCCCCHHHHHHHH
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRS-------------------------------------DGPPIDWNTRVKIA 287 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~ 287 (473)
+.+. +..++||||+++|+|.+++.... ....+++..+..++
T Consensus 97 ~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 97 YEDE--QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred hccC--CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 9876 78999999999999999884210 01124677888999
Q ss_pred HHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC--cEEEeccCCCcccCCC------CccCcccccccCChhhhhc--C
Q 011995 288 LCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF--SAKLSGYGCAGHIPET------DISNSSVAAANLSVETLER--G 357 (473)
Q Consensus 288 ~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~--~vkl~DFGla~~~~~~------~~~~~~~t~~y~aPE~~~~--~ 357 (473)
.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++..+... ......+|+.|+|||++.+ .
T Consensus 175 ~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 99999999999999 99999999999998776 8999999999765321 1234578899999999975 6
Q ss_pred CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 011995 358 LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437 (473)
Q Consensus 358 ~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~ 437 (473)
.++.++|||||||++|||++|+.||......+....+....... ........+..+.+|+.+||+.
T Consensus 252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~ 317 (345)
T 3hko_A 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF--------------ENPNYNVLSPLARDLLSNLLNR 317 (345)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT--------------TSGGGGGSCHHHHHHHHHHSCS
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc--------------CCcccccCCHHHHHHHHHHcCC
Confidence 78999999999999999999999998776554433222111000 0001123567899999999999
Q ss_pred CCCCCCCHHHHHHH
Q 011995 438 EPSERPTMRSIFEE 451 (473)
Q Consensus 438 dP~~RPt~~eil~~ 451 (473)
||.+|||+.++++.
T Consensus 318 ~p~~Rps~~~~l~h 331 (345)
T 3hko_A 318 NVDERFDAMRALQH 331 (345)
T ss_dssp CTTTSCCHHHHHHS
T ss_pred ChhHCCCHHHHhcC
Confidence 99999999999873
No 127
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.8e-43 Score=342.25 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=205.3
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+.... .....+.+|+.++..++|++++..++++...+ +.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~---~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~ 79 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAA---GEEVAIKLECVK---TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DY 79 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTT---TEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEET-TE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCC---CceEEEEeeccc---ccchHHHHHHHHHHHhcCCCCCCeeeeecCCC-Cc
Confidence 457899999999999999999985443 345566654433 22356889999999999999888887775543 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFG 329 (473)
.++||||+ +++|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 89999999 99999999642 346999999999999999999999999 9999999999999 788999999999
Q ss_pred CCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 330 CAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 330 la~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
++....... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||..................
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 998764332 13457889999999999999999999999999999999999999765432211111100000
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCc
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSS 463 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~ 463 (473)
... .. .......++.++.+|+.+||+.||++|||+.+|++.|+++..+.+.+.
T Consensus 234 -----~~~----~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 234 -----KMS----TP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp -----HHH----SC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred -----ccc----ch-hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 000 00 000012335789999999999999999999999999999987776543
No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.4e-43 Score=346.30 Aligned_cols=262 Identities=20% Similarity=0.249 Sum_probs=199.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC-
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~- 250 (473)
.++|+..+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++.+++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRD---HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCC---CceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 46799999999999999999985443 4556666665432 23345678999999999999999999999876422
Q ss_pred -CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCS
T ss_pred CcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeecc
Confidence 2359999999999999999543 36899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 330 CAGHIPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 330 la~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
++....... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.+.................
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--- 238 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC---
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC---
Confidence 998664321 223467999999999999999999999999999999999999998766544322111100000
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHhhhcc
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-MRSIFEELDRQESR 458 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~~L~~l~~~ 458 (473)
+ ......++.++.+|+.+||+.||.+||+ ++++.+.|.++...
T Consensus 239 --------~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 239 --------P---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp --------H---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred --------c---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 0 0001235678999999999999999996 55555667665443
No 129
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.3e-43 Score=352.83 Aligned_cols=248 Identities=16% Similarity=0.185 Sum_probs=195.4
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
...+.||+|+||.||+|....+ +..+++|+.... .....+.+.+|+++|.+++||||+++++++... +..+|||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~---g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~~lv~ 165 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETAT---GLKLAAKIIKTR-GMKDKEEVKNEISVMNQLDHANLIQLYDAFESK--NDIVLVM 165 (373)
T ss_dssp EEEEECC-----CEEEEEETTT---CCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SEEEEEE
T ss_pred ecceEEecCcCEEEEEEEEcCC---CcEEEEEEEccc-ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CEEEEEE
Confidence 3357899999999999986543 345556655433 224567899999999999999999999999876 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee--CCCCcEEEeccCCCcccC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI--DKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl--~~~~~vkl~DFGla~~~~ 335 (473)
||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++....
T Consensus 166 E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999999988543 346899999999999999999999999 9999999999999 567899999999998765
Q ss_pred CCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 336 ETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 336 ~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+.........+..... .
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~------~-------- 306 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW------D-------- 306 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC------C--------
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC------C--------
Confidence 433 3345789999999999988899999999999999999999999988765543332211100 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.......++.++.+||.+||+.||.+|||+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000011234578999999999999999999999997
No 130
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.3e-43 Score=361.37 Aligned_cols=248 Identities=18% Similarity=0.268 Sum_probs=204.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.... +++.+++|+..... .......+.+|+.+++.++||||+++++++... +
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~--~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHEL---TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP--S 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETT---TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--C
Confidence 3679999999999999999998653 34556666654321 122356789999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a 163 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS 163 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred EEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccch
Confidence 89999999999999999953 346999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... ....++|+.|+|||++.+..+ +.++|||||||++|||++|..||.+.........+....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~----------- 232 (476)
T 2y94_A 164 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI----------- 232 (476)
T ss_dssp EECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-----------
T ss_pred hhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 8765433 345678999999999988765 689999999999999999999998766544332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+...+.++.+|+.+||+.||.+|||+.+|++
T Consensus 233 -------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 233 -------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0113345578999999999999999999999997
No 131
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.8e-43 Score=344.60 Aligned_cols=264 Identities=19% Similarity=0.303 Sum_probs=207.1
Q ss_pred hcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.+.+ +......+++|+............+.+|+.++++++||||+++++++... .
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--L 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC--C
Confidence 4678999999999999999998643 23344556666654444555667899999999999999999999998765 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEE
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAK 324 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vk 324 (473)
..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+|||++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEE
Confidence 78999999999999999975431 245899999999999999999999999 999999999999984 45699
Q ss_pred EeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~- 262 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG- 262 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC-
Confidence 99999987543221 223456789999999999999999999999999999998 999998766544332222110
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
....+..++..+.+++.+||+.||.+||++.+|++.|+.+....
T Consensus 263 ----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 ----------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 01113345678999999999999999999999999999876543
No 132
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.2e-42 Score=358.06 Aligned_cols=266 Identities=15% Similarity=0.192 Sum_probs=197.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|+..+.||+|+||+||+|.... +.+.+++|+..... .....+.+.+|+.+|+.++|||||++++++...+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECC---CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence 5789999999999999999998544 34556666655332 3344677899999999999999999999986542
Q ss_pred -CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 250 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
...+||||||+++ +|.+.+.. .+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+||
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEE
Confidence 2467999999966 57776632 3899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc--c------
Q 011995 329 GCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR--P------ 399 (473)
Q Consensus 329 Gla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~--~------ 399 (473)
|+++..... ......+|+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+..+....+.... +
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 209 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred EeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 999876543 2345688999999999999999999999999999999999999999877655433321100 0
Q ss_pred --------ccccc-----cccccccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 --------FLADD-----CRLSLIMDPQLKG---RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 --------~~~~~-----~~~~~~~~~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.... ..+.......+.. ......+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000000000 0012236789999999999999999999999874
No 133
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.2e-43 Score=354.14 Aligned_cols=249 Identities=19% Similarity=0.200 Sum_probs=194.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHH-HHhCCCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNT-LASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~-l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||+|+...+ .+.+++|+..... .......+.+|..+ ++.++||||+++++++.+.
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~-- 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAE---EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-- 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTT---CCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS--
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCC---CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC--
Confidence 46899999999999999999996543 3556666665432 22334566777776 5678999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~ 185 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGL 185 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCB
T ss_pred CEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcc
Confidence 789999999999999999954 236899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++.... ......++|+.|+|||++.+..++.++|||||||++|||++|..||...+..+....+....
T Consensus 186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------- 255 (373)
T 2r5t_A 186 CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP---------- 255 (373)
T ss_dssp CGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC----------
T ss_pred ccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc----------
Confidence 986432 23455688999999999999999999999999999999999999998766554433222110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++..++..+.+||.+||+.||.+||++.+.+++
T Consensus 256 --------~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 256 --------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp --------CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred --------cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 01233456789999999999999999998644433
No 134
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-42 Score=335.36 Aligned_cols=253 Identities=16% Similarity=0.216 Sum_probs=205.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ +..+++|+..... .......+.+|+.++++++||||+++++++... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--SF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCC---CceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC--CE
Confidence 57899999999999999999986543 3455666665432 334457788999999999999999999999765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc---EEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS---AKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---vkl~DFG 329 (473)
.++||||+++++|.+.+... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 89999999999998888543 45899999999999999999999999 999999999999986655 9999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++....... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||...........+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------- 225 (284)
T 3kk8_A 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-------- 225 (284)
T ss_dssp TCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------
T ss_pred eeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--------
Confidence 997665433 24457899999999999999999999999999999999999999877655443333211100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
........++.++.+|+.+||+.||.+|||+.|+++.
T Consensus 226 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 ------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0001122455789999999999999999999999984
No 135
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=343.67 Aligned_cols=267 Identities=16% Similarity=0.255 Sum_probs=201.0
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC--CCCCcccceeeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL--QHPNLCKLLGFHA 246 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~HpnIv~l~g~~~ 246 (473)
.-....++|+..+.||+|+||.||+|.+.+ +.+++|+... .....+.+|.+++..+ +||||+++++++.
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWRG-----EKVAVKVFFT----TEEASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEETT-----EEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred cccccccceEEEeEeecCCCeEEEEEEECC-----ceEEEEEEec----cccchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 333456789999999999999999998652 4455555432 2334555666666655 9999999999987
Q ss_pred cCCC--CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc--------CCCceeecCCCCCcee
Q 011995 247 RDGS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE--------GPFQAMYNEFSTANIQ 316 (473)
Q Consensus 247 ~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~--------~~~~ivHrDlkp~NIL 316 (473)
.... ...++||||+++|+|.+++... .+++..+..++.|++.||+|||++ + |+||||||+|||
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nil 174 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNIL 174 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEE
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEE
Confidence 6532 5789999999999999999543 589999999999999999999998 7 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCc------cCcccccccCChhhhhcCCCCCc------CCchHHHHHHHHHHcC------
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDI------SNSSVAAANLSVETLERGLLTPK------SNVWSFGIVLLELLTG------ 378 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~------~~~~~t~~y~aPE~~~~~~~s~~------sDvwSlGvvl~elltG------ 378 (473)
++.++.+||+|||++........ ....+|+.|+|||++.+..++.. +|||||||++|||++|
T Consensus 175 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~ 254 (337)
T 3mdy_A 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254 (337)
T ss_dssp ECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccc
Confidence 99999999999999976643321 24478999999999988776665 9999999999999999
Q ss_pred ----CCCCCCCChHHH--HhHhhhcccccccccccccccccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 379 ----RKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKGRF-PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 379 ----~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.||........ ....... ......+.+...+ ...++.++.+|+.+||+.||.+|||+.+|++.
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 255 VEEYQLPYHDLVPSDPSYEDMREIV---------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHH---------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccccccHhhhcCCCCchhhhHHHH---------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 666644321110 0000000 0000111111111 23778899999999999999999999999999
Q ss_pred HHhhhcccC
Q 011995 452 LDRQESRKS 460 (473)
Q Consensus 452 L~~l~~~~~ 460 (473)
|+++.....
T Consensus 326 L~~l~~~~~ 334 (337)
T 3mdy_A 326 LAKMSESQD 334 (337)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHhhcc
Confidence 999886543
No 136
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-42 Score=336.52 Aligned_cols=258 Identities=15% Similarity=0.278 Sum_probs=207.8
Q ss_pred hcccccCc-ceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDR-CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~-~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+ .||+|+||.||+|.+... ...+.+++|+..... .....+.+.+|+.++..++||||+++++++. . +
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~--~ 90 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-A--E 90 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECS-SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-S--S
T ss_pred chhhhhccCccccccCeeeEeeeecCC-CceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-C--C
Confidence 46787777 999999999999965432 345666666665432 3344678999999999999999999999983 3 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 789999999999999999653 45899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccc
Q 011995 332 GHIPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 332 ~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
........ ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...........+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------- 237 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE------- 237 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------
Confidence 87643321 22345678999999998889999999999999999999 999998766544333222110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...++..++..+.+++.+||+.||.+||++.+|++.|+++...
T Consensus 238 ----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 238 ----------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1112445668899999999999999999999999999988654
No 137
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.4e-43 Score=339.13 Aligned_cols=266 Identities=13% Similarity=0.100 Sum_probs=207.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+..... ....+.+|+.++..++|++++..++++...+ ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~ 80 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAA---GEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYN 80 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTT---TEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEET-TEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCC---CcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCC-Cce
Confidence 57899999999999999999985433 3556666655432 2356889999999999999888887775543 788
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYGC 330 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFGl 330 (473)
++||||+ +++|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 9999999 89999999632 346999999999999999999999999 9999999999999 4789999999999
Q ss_pred CcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 331 AGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 331 a~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
+....... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-- 232 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-- 232 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH--
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc--
Confidence 98764432 2345788999999999999999999999999999999999999986432211111100000
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCC
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~ 462 (473)
. .... ..+. ....++.++.+++.+||+.||.+|||+.+|++.|+++..+...+
T Consensus 233 -~--~~~~-~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 233 -K--KMST-PIEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp -H--HHHS-CHHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -c--ccCC-chHH----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 0 0000 0000 01234578999999999999999999999999999988776653
No 138
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.8e-43 Score=351.04 Aligned_cols=252 Identities=15% Similarity=0.157 Sum_probs=189.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||+||++.... +.+.+++|+... .......+.+|+.+++.++||||+++++++.+. ...
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~ 91 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKL---TKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVRFKEVILTP--THL 91 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETT---TCCEEEEEEEES--STTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS--SEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEec--CccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC--CEE
Confidence 4579999999999999999999653 344555665543 233346788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc--EEEeccCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--AKLSGYGCA 331 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--vkl~DFGla 331 (473)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 92 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a 165 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYS 165 (361)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC
T ss_pred EEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcc
Confidence 9999999999999998542 35999999999999999999999999 999999999999987765 999999999
Q ss_pred cccCCC-CccCcccccccCChhhhhcCCCCCc-CCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhcccccccccccc
Q 011995 332 GHIPET-DISNSSVAAANLSVETLERGLLTPK-SNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLADDCRLS 408 (473)
Q Consensus 332 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~-sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 408 (473)
+..... ......+|+.|+|||++.+..++.+ +|||||||++|||++|+.||......... ..+..
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~------------ 233 (361)
T 3uc3_A 166 KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR------------ 233 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH------------
T ss_pred ccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH------------
Confidence 754322 3345578999999999988887655 89999999999999999999764432111 11110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+............++.++.+||.+||+.||.+|||+.|+++.
T Consensus 234 -~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 234 -ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -HHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -HhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000000000112345788999999999999999999999875
No 139
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-42 Score=337.00 Aligned_cols=249 Identities=18% Similarity=0.253 Sum_probs=205.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|....+. ..+++|+..... .......+.+|++++..++||||+++++++.+. +
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNK---FIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR--K 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTT---EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--S
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCC---cEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC--C
Confidence 468999999999999999999865433 344555543321 122346788999999999999999999999865 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEeccccc
Confidence 899999999999999999543 35899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
............+++.|+|||.+.+..++.++||||||+++|||++|..||...........+...
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-------------- 227 (284)
T 2vgo_A 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------------- 227 (284)
T ss_dssp EECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--------------
T ss_pred ccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--------------
Confidence 776555555667899999999999989999999999999999999999999876544432222110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+ ..++...+..+.+++.+||+.||.+|||+.++++.
T Consensus 228 ~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 D----LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp C----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred c----cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0 11234456789999999999999999999999873
No 140
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=338.93 Aligned_cols=267 Identities=20% Similarity=0.228 Sum_probs=199.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||+||+|....+ ++.+++|+..... .....+.+.+|+.++.+++||||+++++++... +.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDT---GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK--RR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCC---CcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC--Ce
Confidence 36799999999999999999996543 3455555544332 223356788999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 150 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFAR 150 (311)
T ss_dssp EEEEEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCch
Confidence 9999999999999988843 346899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc-c-------
Q 011995 333 HIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF-L------- 401 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-~------- 401 (473)
..... ......+|..|+|||.+.+ ..++.++|||||||++|||++|..||.+.........+...... .
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 151 LLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp ECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred hccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence 76432 2234578899999999976 56899999999999999999999999887665544333211000 0
Q ss_pred ccccccccccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRF-----PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...........+...... ...++..+.+|+.+||+.||.+|||++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000000000 12456779999999999999999999999864
No 141
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4e-42 Score=335.96 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=208.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+.|...+.||+|+||.||+|.... ..+.+++|+..........+.+.+|+.++..++||||+++++++... ...+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECC---CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEE
Confidence 468888999999999999998543 34556677766655556678899999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++...
T Consensus 97 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 169 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQL 169 (303)
T ss_dssp EEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceec
Confidence 99999999999999842 46999999999999999999999999 999999999999999999999999999776
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....+++.|+|||.+.+..++.++|||||||++|||++|..||...........+.... .
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------~ 236 (303)
T 3a7i_A 170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-------------P 236 (303)
T ss_dssp BTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-------------C
T ss_pred CccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC-------------C
Confidence 5432 234568899999999999999999999999999999999999998765544332221100 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
+ .++..++..+.+|+.+||..||.+|||+.++++..-
T Consensus 237 ~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 237 P----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp C----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred C----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 1 112344578999999999999999999999998644
No 142
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=347.80 Aligned_cols=265 Identities=17% Similarity=0.224 Sum_probs=196.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||+||+|....+ .+.+++|+............+.+|+.+++.++||||+++++++... +..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLT---DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS--SCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCC---CcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC--CEEE
Confidence 5789999999999999999986543 3455666665444434444667899999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||++ |+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 77 lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp EEEECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred EEecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 9999996 5999888653 346899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc-----
Q 011995 335 PET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR----- 406 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 406 (473)
... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+............
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhc
Confidence 432 2334577999999999976 56899999999999999999999999987765544433211100000000
Q ss_pred ---cccccccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 407 ---LSLIMDPQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 407 ---~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......+.... ......+.++.+|+.+||+.||.+|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000000 001235678899999999999999999999987
No 143
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=357.67 Aligned_cols=261 Identities=16% Similarity=0.177 Sum_probs=206.0
Q ss_pred HHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 167 ~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
+.++....++|+..+.||+|+||.||+|+... +++.+++|+..... .......+.+|+.++..++||||++++++
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~---~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 34444557899999999999999999999654 34556666654321 12234568899999999999999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
+.+. +.+||||||+++|+|.+++... +..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+|
T Consensus 130 ~~~~--~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vk 202 (412)
T 2vd5_A 130 FQDE--NYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIR 202 (412)
T ss_dssp EECS--SEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEE
T ss_pred EeeC--CEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEE
Confidence 9876 7899999999999999999642 346999999999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCCCc---cCcccccccCChhhhh-------cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh
Q 011995 325 LSGYGCAGHIPETDI---SNSSVAAANLSVETLE-------RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394 (473)
Q Consensus 325 l~DFGla~~~~~~~~---~~~~~t~~y~aPE~~~-------~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~ 394 (473)
|+|||++........ ...++|+.|+|||++. +..++.++|||||||++|||++|+.||......+....+
T Consensus 203 L~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i 282 (412)
T 2vd5_A 203 LADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282 (412)
T ss_dssp ECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999987654322 3457899999999997 356899999999999999999999999887665543332
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER---PTMRSIFEE 451 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~eil~~ 451 (473)
...... ..-+ .++..++.++.+||.+||. +|.+| |+++||++.
T Consensus 283 ~~~~~~---------~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 283 VHYKEH---------LSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HTHHHH---------CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HhcccC---------cCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 211000 0000 0123456889999999999 99998 589998753
No 144
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=349.01 Aligned_cols=268 Identities=14% Similarity=0.136 Sum_probs=199.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh----------hhHhHHHHHHHHHhCCCCCccccee
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ----------GVKEFINDVNTLASLQHPNLCKLLG 243 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~Ei~~l~~l~HpnIv~l~g 243 (473)
.++|...+.||+|+||.||+|...........+++|+........ ....+.+|+.++..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999986544455566666665432210 1234678889999999999999999
Q ss_pred eeecC--CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 244 FHARD--GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 244 ~~~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
++... +....++||||+ +++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence 98762 237899999999 99999999543 27999999999999999999999999 99999999999998877
Q ss_pred --cEEEeccCCCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH
Q 011995 322 --SAKLSGYGCAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE 390 (473)
Q Consensus 322 --~vkl~DFGla~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~ 390 (473)
.+||+|||+++.+.... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 99999999997653221 1344788999999999999999999999999999999999999964322111
Q ss_pred --HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 391 --RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 391 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
............. ....... ...++.++.+++.+||..||.+|||+.+|++.|+.+..
T Consensus 269 ~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 269 AVQTAKTNLLDELPQ------SVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHTTTH------HHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHHhhcccccH------HHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111100000000 0000000 11345789999999999999999999999999998764
No 145
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-43 Score=345.33 Aligned_cols=278 Identities=19% Similarity=0.259 Sum_probs=209.1
Q ss_pred hcccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|.+.. +...++.+++|+... ......+.+.+|+++++.++||||+++++++...+...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 4578889999999999999998643 233455666665543 24455678999999999999999999999987765568
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 89999999999999999653 346899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
....... ....++..|+|||.+.+..++.++|||||||++|||++|..||......... ..............+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR-MIGNDKQGQMIVFHL 272 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHH-HHCTTCCTHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHH-hhccccchhhhHHHH
Confidence 7654321 2234567899999999888999999999999999999999988643111100 000000000000000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+........+..++.++.+++.+||..||.+|||+.+|++.|+++..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 011111111122445678899999999999999999999999999998754
No 146
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.3e-43 Score=339.66 Aligned_cols=261 Identities=18% Similarity=0.291 Sum_probs=201.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||+||+|.+.........+++|+.... ......+.+.+|+.++..++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 46799999999999999999986543333333444444332 1345567899999999999999999999998753
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++
T Consensus 94 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 94 PMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred CceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccc
Confidence 488999999999999999643 345899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccc
Q 011995 332 GHIPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 332 ~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
........ ....++..|+|||.+.+..++.++||||||+++|||++ |+.||...........+....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------- 241 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG------- 241 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-------
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC-------
Confidence 87644321 23355678999999998889999999999999999999 999998776544332221110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.....+..++.++.+++.+||..||.+|||+.++++.|+++...
T Consensus 242 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 ---------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00111334568899999999999999999999999999987654
No 147
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.4e-42 Score=332.97 Aligned_cols=252 Identities=17% Similarity=0.192 Sum_probs=202.0
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|....+. ..+++++.... .....+.+.+|+++++.++||||+++++++.+. ..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~a~k~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~ 80 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTR---IRRAAKKIPKY-FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN--TD 80 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTC---CEEEEEEEEGG-GCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCC---cEEEEEeehhh-ccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--Ce
Confidence 3567999999999999999999965543 33444444332 223457889999999999999999999999865 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFG 329 (473)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg 154 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFG 154 (277)
T ss_dssp EEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecc
Confidence 9999999999999998854 345899999999999999999999999 9999999999999 788999999999
Q ss_pred CCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 330 CAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 330 la~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++...... ......+|+.|+|||.+.+. ++.++|||||||++|||++|..||......+....+.........
T Consensus 155 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 228 (277)
T 3f3z_A 155 LAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPE----- 228 (277)
T ss_dssp TCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH-----
T ss_pred cceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc-----
Confidence 99876543 33455789999999998654 899999999999999999999999876655433322211100000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....++..+.+|+.+||+.||.+|||+.++++.
T Consensus 229 ---------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 ---------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001345789999999999999999999999863
No 148
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=345.04 Aligned_cols=246 Identities=15% Similarity=0.159 Sum_probs=191.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||+||+|....+ .+.+++|+..... .......+..|+..+..+ +|+||+++++++.+. +
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~--~ 130 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKED---GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG--G 130 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTT---SCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred hhheeeeheeccCCCeEEEEEEECCC---CeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC--C
Confidence 36899999999999999999997643 3445566544332 233344566666666665 999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceee
Confidence 899999999 77999888653 346999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... .....+|+.|+|||++.+ .++.++|||||||++|||++|..++....... .+..
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~--------------- 266 (311)
T 3p1a_A 205 VELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ--QLRQ--------------- 266 (311)
T ss_dssp EECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH--HHTT---------------
T ss_pred eecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--HHhc---------------
Confidence 7764433 234468999999999875 78999999999999999999977665422111 0000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......++..++.++.+|+.+||+.||++|||+.|+++
T Consensus 267 --~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 267 --GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --TCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00001112235678999999999999999999999986
No 149
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-43 Score=348.11 Aligned_cols=245 Identities=16% Similarity=0.240 Sum_probs=201.1
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-------ChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-------SQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
...++|...+.||+|+||.||+|....+ .+.+++|+...... ......+.+|+.+++.++||||++++++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~ 97 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEK---NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI 97 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTT---TEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCC---CcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3467899999999999999999985443 45566666654321 1234578899999999999999999999
Q ss_pred eecCCCCceEEEEEeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 245 HARDGSDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
+.+. +..++||||+.+| +|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 98 ~~~~--~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 98 FENQ--GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp EECS--SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCE
T ss_pred EeeC--CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcE
Confidence 9866 7899999999777 99999854 346999999999999999999999999 9999999999999999999
Q ss_pred EEeccCCCcccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 324 KLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 324 kl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
||+|||++....... .....+|+.|+|||++.+..+ +.++|||||||++|||++|..||....... .
T Consensus 170 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~------ 238 (335)
T 3dls_A 170 KLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-----E------ 238 (335)
T ss_dssp EECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----T------
T ss_pred EEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----h------
Confidence 999999998765443 334578999999999988776 789999999999999999999996521100 0
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... ..+..++.++.+|+.+||+.||.+|||+.++++.
T Consensus 239 -------~~~------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 -------AAI------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------TCC------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------hcc------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0122355789999999999999999999999985
No 150
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-42 Score=347.14 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=200.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+.|...+.||+|+||.||+|.... ..+.+++|+...... ....+.+.+|+++++.++||||+++++++... +.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred hheeeeeEEccCCCEEEEEEEEcc---CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--Ce
Confidence 558888999999999999998543 334566666654322 23346789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+. |+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred EEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 999999996 6888887532 346999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.... .....+|+.|+|||++. ++.++.++|||||||++|||++|..||...........+....
T Consensus 203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~----------- 269 (348)
T 1u5q_A 203 IMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----------- 269 (348)
T ss_dssp SSSS--BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-----------
T ss_pred ecCC--CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-----------
Confidence 7643 24457899999999985 4678999999999999999999999998766544322111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
.+.+ .+...+..+.+|+.+||+.||.+|||+.++++..
T Consensus 270 --~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 270 --SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp --CCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred --CCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0001 1223457889999999999999999999998753
No 151
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-42 Score=340.85 Aligned_cols=260 Identities=16% Similarity=0.157 Sum_probs=198.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+..... .....+.+.+|+.++..++||||+++++++..+ +
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--~ 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVR---ERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID--G 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTT---TEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--T
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCC---CeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC--C
Confidence 57899999999999999999986543 3455565554321 223347789999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred eEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccC
Confidence 899999999999999999543 46899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... .....+++.|+|||.+.+..++.++||||||+++|||++|+.||...........+....+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--------- 252 (309)
T 2h34_A 182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIP--------- 252 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCC---------
T ss_pred ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCC---------
Confidence 7664432 2344678999999999988899999999999999999999999987544322221111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhccc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-TMRSIFEELDRQESRK 459 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~~l~~~~ 459 (473)
....++..++.++.+++.+||..||.+|| +++++++.|+.+....
T Consensus 253 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 253 ------RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ------CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ------CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 00112334557899999999999999999 9999999999876544
No 152
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-42 Score=344.50 Aligned_cols=266 Identities=15% Similarity=0.179 Sum_probs=193.8
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
..++|...+.||+|+||+||+|....+ .+.+++|+..... .......+.+|+.+++.++||||+++++++... +
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~ 106 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVT---NETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN--H 106 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTT---TEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET--T
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCC---CceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC--C
Confidence 357899999999999999999985443 4555666655433 233356788999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee-----CCCCcEEEe
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI-----DKDFSAKLS 326 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl-----~~~~~vkl~ 326 (473)
..++||||++ |+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+
T Consensus 107 ~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~ 179 (329)
T 3gbz_A 107 RLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIG 179 (329)
T ss_dssp EEEEEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred EEEEEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEEC
Confidence 8999999997 5999999643 35999999999999999999999999 9999999999999 455669999
Q ss_pred ccCCCcccCCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 327 GYGCAGHIPET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 327 DFGla~~~~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|||++...... ......+|+.|+|||++.+.. ++.++|||||||++|||++|..||...........+.........
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259 (329)
T ss_dssp CTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred cCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCch
Confidence 99999765422 234456799999999998754 899999999999999999999999887655443322111000000
Q ss_pred ccc------------cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCR------------LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~------------~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
... ........+...++...+.++.+|+.+||+.||.+|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 00000000000111225678899999999999999999999986
No 153
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=346.00 Aligned_cols=249 Identities=19% Similarity=0.321 Sum_probs=195.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCC--CCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQH--PNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~ 250 (473)
.++|++.+.||+|+||.||++...+ ...+++|+..... .......+.+|+.+|..++| +||+++++++...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTT----SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCC----CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC--
Confidence 4679999999999999999998543 3456666665543 34455788999999999976 9999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||| +.+|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~ 153 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGI 153 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred CEEEEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeeccc
Confidence 78999999 5588999999653 46899999999999999999999999 99999999999997 57899999999
Q ss_pred CcccCCCC----ccCcccccccCChhhhhc-----------CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 331 AGHIPETD----ISNSSVAAANLSVETLER-----------GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 331 a~~~~~~~----~~~~~~t~~y~aPE~~~~-----------~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
+....... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 154 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---- 229 (343)
T 3dbq_A 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 229 (343)
T ss_dssp SCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH----
T ss_pred ccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH----
Confidence 98764332 234578999999999975 66889999999999999999999999764332111
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+..+.++.....++...+.++.+|+.+||+.||.+|||+.++++.
T Consensus 230 -----------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 230 -----------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 011111222223344445788999999999999999999999865
No 154
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-42 Score=357.93 Aligned_cols=267 Identities=16% Similarity=0.179 Sum_probs=185.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|++.+.||+|+||+||+|.... +.+.+++|+.... ......+.+.+|+.+|+.++|||||++++++....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred CCCeEEeeEeeecCCeEEEEEEECC---CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 3689999999999999999998543 4456666655433 23344578899999999999999999999985432
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...+|+||||+ +|+|.+++.. ...+++..+..++.||+.||.|||+.+ ||||||||+||||+.++.+||+|||
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccc
Confidence 25789999998 5799999854 346999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC-----------------------------CccCcccccccCChhhh-hcCCCCCcCCchHHHHHHHHHHc--
Q 011995 330 CAGHIPET-----------------------------DISNSSVAAANLSVETL-ERGLLTPKSNVWSFGIVLLELLT-- 377 (473)
Q Consensus 330 la~~~~~~-----------------------------~~~~~~~t~~y~aPE~~-~~~~~s~~sDvwSlGvvl~ellt-- 377 (473)
+++..... .....++|++|+|||++ .+..++.++|||||||++|||++
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 99876421 12344679999999987 45669999999999999999999
Q ss_pred ---------CCCCCCCCChH--------------------HHHhHhhh-c-ccccc------cc--cc----cccccccc
Q 011995 378 ---------GRKNLDSRHPK--------------------EERNLVKW-S-RPFLA------DD--CR----LSLIMDPQ 414 (473)
Q Consensus 378 ---------G~~p~~~~~~~--------------------~~~~~~~~-~-~~~~~------~~--~~----~~~~~~~~ 414 (473)
|.++|.+.... .....+.. . .+... .. .. +.......
T Consensus 282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (458)
T 3rp9_A 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD 361 (458)
T ss_dssp TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence 67777654310 00000000 0 00000 00 00 00000000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+... ....+.++.+|+.+||+.||.+|||+.|+|+.
T Consensus 362 ~~~~-~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 362 LAER-FPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGGG-STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHH-CCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111 12346889999999999999999999999984
No 155
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.8e-42 Score=333.26 Aligned_cols=253 Identities=17% Similarity=0.193 Sum_probs=203.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+..........+.+.+|+.+++.++||||+++++++.+. +.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--NI 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTT---CCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCC---CcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--CE
Confidence 357899999999999999999986543 3455666665544445567899999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 153 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLAT 153 (276)
T ss_dssp EEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCcc
Confidence 8999999999999999843 346899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC----CccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 333 HIPET----DISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 333 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
..... ......+++.|+|||.+.+..+ +.++|||||||++|||++|..||......... ...|....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~------- 225 (276)
T 2yex_A 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKK------- 225 (276)
T ss_dssp ECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-HHHHHTTC-------
T ss_pred ccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHhhhcc-------
Confidence 65322 1234568899999999987665 77899999999999999999999865432211 11111100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........+..+.+|+.+||+.||.+|||+.++++.
T Consensus 226 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 226 -------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -------cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0000123456788999999999999999999999863
No 156
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.5e-42 Score=348.63 Aligned_cols=269 Identities=18% Similarity=0.171 Sum_probs=202.4
Q ss_pred hcccccCcceeec--CCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.++|++.+.||+| +||.||+|.... .++.+++|+..... .......+.+|+.+++.++|||||++++++.+.
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKP---TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-- 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC--
Confidence 4689999999999 999999999654 34556677665543 334456788999999999999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..++||||+++|+|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~ 174 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRS 174 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGG
T ss_pred CEEEEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEccccc
Confidence 7899999999999999999654 2346999999999999999999999999 99999999999999999999999998
Q ss_pred CcccCCC---------CccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hcc
Q 011995 331 AGHIPET---------DISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSR 398 (473)
Q Consensus 331 a~~~~~~---------~~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~ 398 (473)
+...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+. ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 254 (389)
T 3gni_B 175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 254 (389)
T ss_dssp CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----
T ss_pred ceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 7543211 1223467889999999987 578999999999999999999999998755433221110 000
Q ss_pred cccccccc------------------ccccc---------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PFLADDCR------------------LSLIM---------DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~~~~~~~------------------~~~~~---------~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+...+... ..... .......++..++..+.+||.+||+.||.+|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000000 00000 0000011344567889999999999999999999999865
No 157
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.2e-42 Score=350.48 Aligned_cols=248 Identities=20% Similarity=0.325 Sum_probs=195.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCC--CCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQ--HPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~~ 251 (473)
.+|.+.+.||+|+||.||+|...+ ...+++|+..... .......+.+|+.+|..++ |+|||++++++... +
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~--~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD--Q 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT----CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--S
T ss_pred CceEEEEEEccCCCeEEEEEEcCC----CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC--C
Confidence 469999999999999999998543 4456677665543 3445678999999999996 59999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+||||| +.+++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||++
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a 201 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIA 201 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSS
T ss_pred EEEEEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcc
Confidence 8999999 5688999999653 36899999999999999999999999 99999999999996 579999999999
Q ss_pred cccCCCC----ccCcccccccCChhhhhc-----------CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 332 GHIPETD----ISNSSVAAANLSVETLER-----------GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 332 ~~~~~~~----~~~~~~t~~y~aPE~~~~-----------~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
..+.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... +
T Consensus 202 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-~--- 277 (390)
T 2zmd_A 202 NQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-L--- 277 (390)
T ss_dssp CCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-H---
T ss_pred ccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-H---
Confidence 8764332 234578999999999975 36889999999999999999999999765332111 0
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..+.++.....++...+.++.+||.+||+.||.+|||+.|+++.
T Consensus 278 -----------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 -----------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 01111111122233345789999999999999999999999864
No 158
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3e-42 Score=369.78 Aligned_cols=251 Identities=16% Similarity=0.296 Sum_probs=203.7
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
+.||+|+||.||+|.+... ...+.+++|+..... .....+++.+|+++|.+++|||||++++++.. +..+|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~lv~E~ 450 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVMEM 450 (635)
T ss_dssp EEEEECSSEEEEEEEEECS-SCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEEEEEEC
T ss_pred CEeccCCCEEEEEEEEcCC-CcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCEEEEEEc
Confidence 5799999999999976433 345666677665432 23345789999999999999999999999864 468999999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD- 338 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~- 338 (473)
+++|+|.+++.. ...+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++.+....
T Consensus 451 ~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 451 AELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp CTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred cCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 999999999954 346899999999999999999999999 9999999999999999999999999998764332
Q ss_pred ----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 339 ----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 339 ----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~--------------- 589 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--------------- 589 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---------------
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 122345678999999999999999999999999999998 999998876655443332110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...++..++.++.+||.+||+.||++||++.+|++.|+++...
T Consensus 590 --~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 --RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1122445668899999999999999999999999999987643
No 159
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.7e-43 Score=347.52 Aligned_cols=252 Identities=17% Similarity=0.270 Sum_probs=198.8
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+..... ..+.+|++++.++ +||||+++++++.+. +
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~~~~~~-----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~ 89 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSK-----RDPTEEIEILLRYGQHPNIITLKDVYDDG--K 89 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEETTT-----CCCHHHHHHHHHHTTSTTBCCEEEEEECS--S
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCC---CCEEEEEEEEccc-----CChHHHHHHHHHhcCCCCcCeEEEEEEcC--C
Confidence 467899999999999999999996543 4566666664322 3456799999888 799999999999765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC----CcEEEec
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD----FSAKLSG 327 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~----~~vkl~D 327 (473)
..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+..+ +.+||+|
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~D 163 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICD 163 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEE
Confidence 899999999999999999543 46999999999999999999999999 9999999999998433 3599999
Q ss_pred cCCCcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 328 YGCAGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 328 FGla~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
||++...... ......+|+.|+|||++.+..++.++|||||||++|||++|..||..........+..... .+
T Consensus 164 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~----~~- 238 (342)
T 2qr7_A 164 FGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG----SG- 238 (342)
T ss_dssp CTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH----HC-
T ss_pred CCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc----cC-
Confidence 9999876433 2345578999999999988888999999999999999999999997643211111111100 00
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+...+...++.++.+|+.+||..||.+|||+.++++.
T Consensus 239 ------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 239 ------KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ------CCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ------CcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011112234567889999999999999999999999874
No 160
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.6e-42 Score=331.87 Aligned_cols=260 Identities=17% Similarity=0.244 Sum_probs=204.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-----ChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 80 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCC---CCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC
Confidence 36799999999999999999996543 34455665544321 12357799999999999999999999999875
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC----cEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF----SAK 324 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~vk 324 (473)
...++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+|
T Consensus 81 --~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~k 152 (283)
T 3bhy_A 81 --TDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIK 152 (283)
T ss_dssp --SEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEE
T ss_pred --CeEEEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceE
Confidence 789999999999999999954 346899999999999999999999999 99999999999998877 899
Q ss_pred EeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 325 LSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 325 l~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+|||++...... ......+++.|+|||.+.+..++.++||||||+++|||++|..||...........+.....
T Consensus 153 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 228 (283)
T 3bhy_A 153 LIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY---- 228 (283)
T ss_dssp ECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC----
T ss_pred EEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc----
Confidence 9999999876433 23445688999999999988999999999999999999999999987665443322221100
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhhhcc
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE--ELDRQESR 458 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~--~L~~l~~~ 458 (473)
..........+..+.+|+.+||..||.+|||+.++++ .++.+..+
T Consensus 229 ----------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 229 ----------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp ----------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred ----------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0000001234577899999999999999999999997 45555443
No 161
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.4e-42 Score=338.61 Aligned_cols=265 Identities=19% Similarity=0.233 Sum_probs=198.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|.+.+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+++.++||||+++++++... +
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLD---GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--N 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTT---CCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--T
T ss_pred ccceEEEEeecCCCCceEEEEEEcCC---CceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--C
Confidence 45799999999999999999986443 3455566655422 334567789999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~ 182 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGL 182 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--
T ss_pred cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccc
Confidence 899999999999999998532 12456899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+....... .....+++.|+|||.+.+..++.++|||||||++|||++|..||.+....... ..... .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~----~------ 251 (310)
T 2wqm_A 183 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKKI----E------ 251 (310)
T ss_dssp ----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH-HHHHH----H------
T ss_pred eeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH-HHHHh----h------
Confidence 87664332 23446789999999999989999999999999999999999999754321111 11100 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
............+.++.+++.+||..||.+|||+.+|++.|+++.....
T Consensus 252 ---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 252 ---QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ---TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 0000000123455789999999999999999999999999999876544
No 162
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.8e-42 Score=334.25 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=198.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|...+ ..+++|+.. . ....+.+.+|+.++..++||||+++++++.... +..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~~--~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIK--N-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-----EEEEEEECC--C-CC--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CC
T ss_pred hhhceEEeEEecCCCceEEEEEEcC-----CEEEEEEec--c-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-Cce
Confidence 4689999999999999999998642 334444433 2 234577999999999999999999999876542 578
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccc
Confidence 99999999999999995431 223789999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...........+..
T Consensus 167 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~---------------- 229 (278)
T 1byg_A 167 ASSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK---------------- 229 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT----------------
T ss_pred ccccc-cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc----------------
Confidence 54322 23356789999999999999999999999999999998 9999987654332222110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
......+..++..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus 230 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 230 -GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 001122345568899999999999999999999999999998754
No 163
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-42 Score=335.15 Aligned_cols=255 Identities=17% Similarity=0.231 Sum_probs=203.3
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeec-----
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR----- 247 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----- 247 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+.... ...+.+|++++..++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRID---GKTYVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTT---CCEEEEEEEECC-----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCC---CeEEEEEEeccc-----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 456899999999999999999997533 344555555432 2567899999999999999999998754
Q ss_pred ---------CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC
Q 011995 248 ---------DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318 (473)
Q Consensus 248 ---------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~ 318 (473)
......++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+|+||||+|||++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEc
Confidence 1124589999999999999999653 2356999999999999999999999999 99999999999999
Q ss_pred CCCcEEEeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 319 KDFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 319 ~~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
.++.+||+|||++...... ......+++.|+|||.+.+..++.++|||||||++|||++|..|+.... .....
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~- 230 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----KFFTD- 230 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHHH-
T ss_pred CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHHH-
Confidence 9999999999999876543 2344578899999999999999999999999999999999998874211 10000
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
+.+.. ++...+..+.+++.+||+.||.+|||+.++++.|+.+.+....
T Consensus 231 ------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 231 ------------LRDGI----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp ------------HHTTC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred ------------hhccc----ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 00011 1223456789999999999999999999999999998765543
No 164
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-42 Score=345.49 Aligned_cols=265 Identities=14% Similarity=0.195 Sum_probs=198.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-- 250 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..... .....+.+.+|+.+|+.++||||+++++++...+.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRT---GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTT---CCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCC---CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence 46799999999999999999986443 3455555543322 33345678999999999999999999999876421
Q ss_pred --CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 251 --DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 251 --~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
..+|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCC
T ss_pred cCceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEee
Confidence 3569999999 8899999854 35899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc---
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD--- 404 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 404 (473)
|+++.... ......+|++|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.......+..........
T Consensus 173 g~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 173 GLARQADS-EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp TTCEECCS-SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred eccccccc-ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99987643 3455678999999999987 679999999999999999999999998876655433322110000000
Q ss_pred -----c------ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 -----C------RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 -----~------~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .+.......+ ..+....+..+.+|+.+||+.||.+|||+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 0000000011 11223556889999999999999999999999883
No 165
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.3e-42 Score=335.09 Aligned_cols=249 Identities=17% Similarity=0.273 Sum_probs=205.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|...++ .+.+++|+.... ......+.+.+|+.+++.++||||+++++++... +
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADT---KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--D 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--S
T ss_pred ccceEEEEEEeecCCEEEEEEEECCC---CceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC--C
Confidence 46799999999999999999996543 344556655433 2334567789999999999999999999999865 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCc
Confidence 89999999999999998854 246899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+....+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------- 231 (294)
T 2rku_A 163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE----------- 231 (294)
T ss_dssp EECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC-----------
T ss_pred eecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc-----------
Confidence 776422 2334568899999999998889999999999999999999999998766544332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++...+..+.+++.+||+.||.+|||+.++++.
T Consensus 232 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 -------YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -------CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 01233455788999999999999999999999974
No 166
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.2e-42 Score=343.13 Aligned_cols=249 Identities=17% Similarity=0.273 Sum_probs=205.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||++...++ .+.+++|+.... ......+.+.+|+.+++.++|+||+++++++.+. +
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADT---KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--D 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--S
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCC---CCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC--C
Confidence 46899999999999999999996553 345556655433 2334567789999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+.+++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCc
Confidence 89999999999999998854 246899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... ......++..|+|||++.+..++.++|||||||++|||++|+.||......+....+....
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----------- 257 (335)
T 2owb_A 189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE----------- 257 (335)
T ss_dssp EECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-----------
T ss_pred eecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC-----------
Confidence 876432 2334578899999999999889999999999999999999999998765544332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++..++..+.+|+.+||+.||.+|||+.++++.
T Consensus 258 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 -------YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01233445788999999999999999999999974
No 167
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.5e-42 Score=369.66 Aligned_cols=260 Identities=18% Similarity=0.313 Sum_probs=210.9
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|.+.........+++++..........+.+.+|+.++++++||||+++++++.+ +.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---SS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---Cc
Confidence 346799999999999999999998655444455555555444444556789999999999999999999999843 56
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCe
Confidence 89999999999999999643 346899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+....
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~---------- 609 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---------- 609 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC----------
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----------
Confidence 7644322 22345678999999999999999999999999999997 999998776554333222110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
...++..++..+.+|+.+||..||.+|||+.+|++.|+.+..
T Consensus 610 -------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 610 -------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 011234556889999999999999999999999999998864
No 168
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-42 Score=364.74 Aligned_cols=255 Identities=20% Similarity=0.270 Sum_probs=205.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.... +++.+++|+..... .......+.+|+.+|..++|||||++++++.+. +
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~--~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--D 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--S
T ss_pred ccceEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC--C
Confidence 4679999999999999999999654 34556666654321 223346688999999999999999999998876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+||||||+++|+|.+++.... ...+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||++
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla 333 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA 333 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccc
Confidence 8999999999999999996542 345999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... +
T Consensus 334 ~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~------------i 401 (576)
T 2acx_A 334 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL------------V 401 (576)
T ss_dssp EECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH------------H
T ss_pred eecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH------------h
Confidence 8775443 34568999999999999888999999999999999999999999875422111111000 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
. .....++...+.++.+||.+||+.||.+|| ++.||++.
T Consensus 402 ~--~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 402 K--EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp H--HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred h--cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 001123445678899999999999999999 78888753
No 169
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.6e-42 Score=343.48 Aligned_cols=267 Identities=18% Similarity=0.255 Sum_probs=200.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ ++.+++|+..... .....+.+.+|+.+++.++||||+++++++... +.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDT---GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK--KR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTT---CCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCC---CceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC--CE
Confidence 46899999999999999999996543 3455566554433 233356688999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 99 ~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 172 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFAR 172 (331)
T ss_dssp EEEEEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred EEEEEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCce
Confidence 9999999999999888743 345999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-ccc-------c
Q 011995 333 HIPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-RPF-------L 401 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~-------~ 401 (473)
..... ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...........+... ... .
T Consensus 173 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 173 TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred eecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHh
Confidence 66432 23445788999999999775 6899999999999999999999999887655433222100 000 0
Q ss_pred ccccccccccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRF-----PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...........+.+.... ...++..+.+|+.+||+.||.+|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000111111111111 12456889999999999999999999999863
No 170
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=334.34 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=182.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|...+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.++..++||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHT---GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS-- 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS--
T ss_pred ccccceeeeeecCCCceEEEEEEEccC---CceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC--
Confidence 357899999999999999999986432 3445566554321 122346789999999999999999999999875
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..++||||+++++|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~ 158 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGL 158 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecc
Confidence 7899999999999999999643 356899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+...... ......+++.|+|||.+.+..++.++|||||||++|||++|+.||...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------------- 224 (278)
T 3cok_A 159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV-------------- 224 (278)
T ss_dssp CEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--------------
T ss_pred eeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--------------
Confidence 9866432 223456789999999999888999999999999999999999999765432211100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.... ...+...+.++.+++.+||+.||.+|||+.++++.
T Consensus 225 --~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 225 --VLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp --CSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --hhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0000 01233456789999999999999999999999873
No 171
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=346.27 Aligned_cols=269 Identities=17% Similarity=0.214 Sum_probs=205.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-----eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCccc---------
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-----TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK--------- 240 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~--------- 240 (473)
++|...+.||+|+||.||+|....+.. ..+.+++|+.... ..+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 689999999999999999999764311 2455566665422 56889999999999999988
Q ss_pred ------ceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCc
Q 011995 241 ------LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTAN 314 (473)
Q Consensus 241 ------l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~N 314 (473)
+++++... ....++||||+ +++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQ-DKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEET-TTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred ccCccchhhccccC-CcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 56666553 37889999999 99999999653 2356999999999999999999999999 9999999999
Q ss_pred eeeCCCC--cEEEeccCCCcccCCCC---------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 315 IQIDKDF--SAKLSGYGCAGHIPETD---------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 315 ILl~~~~--~vkl~DFGla~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
||++.++ .+||+|||++..+.... .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 89999999997664321 133478899999999999899999999999999999999999998
Q ss_pred CCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCC
Q 011995 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~ 462 (473)
........ .......+... ...+.+... ....++.++.+|+.+||..||.+|||+.+|++.|+++.......
T Consensus 270 ~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 270 NCLPNTED-IMKQKQKFVDK---PGPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp GGTTCHHH-HHHHHHHHHHS---CCCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCCcCHHH-HHHHHHhccCC---hhhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 65321111 11100000000 000000000 01234578999999999999999999999999999998776543
No 172
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.6e-42 Score=336.58 Aligned_cols=253 Identities=16% Similarity=0.222 Sum_probs=203.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|...+.||+|+||.||+|.... .++.+++|+..... ......+.+|+.++..++||||+++++++.+. +.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 80 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRL---TGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYEST--TH 80 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred hhccceeeeeccCCCCceEEEEEECC---CCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccC--CE
Confidence 34679999999999999999998653 33455666655332 22345688999999999999999999999765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFG 329 (473)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg 154 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFG 154 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred EEEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCC
Confidence 99999999999999998543 35899999999999999999999999 9999999999999 788999999999
Q ss_pred CCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 330 CAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 330 la~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
++............+++.|+|||.+.+..++.++|||||||++|||++|..||...........+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------- 224 (304)
T 2jam_A 155 LSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY---------- 224 (304)
T ss_dssp TTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC----------
T ss_pred cceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC----------
Confidence 9987655444455789999999999988899999999999999999999999987665443322221100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+...++..+.+|+.+||..||.+|||+.++++.
T Consensus 225 ----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 ----EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ----CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111233456889999999999999999999999873
No 173
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=344.79 Aligned_cols=272 Identities=18% Similarity=0.283 Sum_probs=195.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHH--HHhCCCCCcccceeeeec---C
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNT--LASLQHPNLCKLLGFHAR---D 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~--l~~l~HpnIv~l~g~~~~---~ 248 (473)
.++|+..+.||+|+||.||+|+..+ +.+++|+... .....+..|.++ +..++|+||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLDE-----RPVAVKVFSF----ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETT-----EEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred hHHhheeeecccCCCeEEEEEEECC-----eEEEEEEeec----cchhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 4689999999999999999998643 4455665542 223444555555 445899999999975532 2
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------CCCceeecCCCCCceeeCC
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE---------GPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~---------~~~~ivHrDlkp~NILl~~ 319 (473)
+...+++||||+++|+|.+++... .+++..+..++.||+.||.|||+. + |+||||||+|||++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKN 155 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECT
T ss_pred CCceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcC
Confidence 334678999999999999999543 358999999999999999999999 8 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC----------ccCcccccccCChhhhhc-------CCCCCcCCchHHHHHHHHHHcCCCCC
Q 011995 320 DFSAKLSGYGCAGHIPETD----------ISNSSVAAANLSVETLER-------GLLTPKSNVWSFGIVLLELLTGRKNL 382 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~----------~~~~~~t~~y~aPE~~~~-------~~~s~~sDvwSlGvvl~elltG~~p~ 382 (473)
++.+||+|||++..+.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 9999999999997664321 123468999999999976 34667899999999999999997766
Q ss_pred CCCChHHHHh-Hh---hhccccccccc--ccccccccccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 383 DSRHPKEERN-LV---KWSRPFLADDC--RLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 383 ~~~~~~~~~~-~~---~~~~~~~~~~~--~~~~~~~~~l~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.......... .. ....+...+.. .......+.+...+ ...++.++.+||.+||+.||++|||+.|+++.|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 4332211000 00 00000000000 00000111111111 23577789999999999999999999999999999
Q ss_pred hhcccCC
Q 011995 455 QESRKSS 461 (473)
Q Consensus 455 l~~~~~~ 461 (473)
+...-..
T Consensus 316 ll~~~~~ 322 (336)
T 3g2f_A 316 LMMIWER 322 (336)
T ss_dssp HHHCCCC
T ss_pred HHHHHHh
Confidence 8755443
No 174
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.4e-42 Score=334.77 Aligned_cols=264 Identities=18% Similarity=0.223 Sum_probs=207.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ .+.+++|+..... .....+.+.+|+.++++++||||+++++++.......
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSD---GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTT---CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCC---CcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence 46899999999999999999986543 3455566655443 3345677899999999999999999999886544478
Q ss_pred eEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCC--CceeecCCCCCceeeCCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP--FQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~--~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+. .+|+||||||+|||++.++.+||+|||
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999999996432 23458999999999999999999999861 239999999999999999999999999
Q ss_pred CCcccCCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
++........ ....++..|+|||.+.+..++.++|||||||++|||++|..||...........+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~--------- 232 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--------- 232 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc---------
Confidence 9876643321 23467899999999999899999999999999999999999998765443322221100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
...++..++.++.+++.+||+.||.+|||+.+|++.+...+.
T Consensus 233 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 233 --------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred --------cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 011233456889999999999999999999999987765443
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=339.72 Aligned_cols=270 Identities=17% Similarity=0.218 Sum_probs=197.5
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC----ChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
....++|...+.||+|+||.||+|.... +++.+++|+...... ......+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG 82 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECC---CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe
Confidence 3446789999999999999999998543 344555665543221 122356889999999999999999999987
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.. ...++||||+++ +|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 83 ~~--~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 154 (346)
T 1ua2_A 83 HK--SNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLA 154 (346)
T ss_dssp CT--TCCEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred eC--CceEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEE
Confidence 65 789999999975 89888854 3456889999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--cccc
Q 011995 327 GYGCAGHIPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RPFL 401 (473)
Q Consensus 327 DFGla~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~~ 401 (473)
|||++...... ......+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.........+... .+..
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234 (346)
T ss_dssp CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred ecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 99999876433 23455789999999999764 4889999999999999999999999887655443322111 0000
Q ss_pred ---ccccccccccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ---ADDCRLSLIMDPQLKGRF-----PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ---~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+.............. ...++.++.+||.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000000000001 13456789999999999999999999999975
No 176
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.4e-42 Score=333.56 Aligned_cols=252 Identities=18% Similarity=0.211 Sum_probs=199.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecC--CCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~ 252 (473)
.|...+.||+|+||.||+|....+. ..+++++.... ........+.+|+.+++.++||||+++++++... +...
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~---~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETT---VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTC---CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCc---eEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 3677789999999999999865543 34445554433 2344567789999999999999999999988652 2356
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla 331 (473)
+++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+. +|+||||||+|||++ .++.+||+|||++
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~~-~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcCCC-CEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 89999999999999999542 468999999999999999999999863 399999999999998 7899999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
............+++.|+|||.+. +.++.++|||||||++|+|++|+.||............... .
T Consensus 180 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------~------- 245 (290)
T 1t4h_A 180 TLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS------G------- 245 (290)
T ss_dssp GGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT------T-------
T ss_pred ccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc------c-------
Confidence 876655555667899999999886 45899999999999999999999999875443322111000 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....++...+.++.+|+.+||+.||.+|||+.++++
T Consensus 246 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 246 --VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0000112233467999999999999999999999986
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.4e-42 Score=351.47 Aligned_cols=254 Identities=15% Similarity=0.245 Sum_probs=191.1
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-------CChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-------SSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
...++|...+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.+|++++||||++++++
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKT---CKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTT---CCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCC---CcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 4568899999999999999999986543 4556666654321 12223468899999999999999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---C
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---F 321 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~ 321 (473)
+.. +..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.+ +
T Consensus 209 ~~~---~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 209 FDA---EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp EES---SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSC
T ss_pred Eec---CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcc
Confidence 854 468999999999999998843 356999999999999999999999999 9999999999999754 4
Q ss_pred cEEEeccCCCcccCCCC-ccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhh
Q 011995 322 SAKLSGYGCAGHIPETD-ISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKW 396 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~ 396 (473)
.+||+|||+++...... .....+|+.|+|||++.+ ..++.++|||||||++|||++|..||........ ...+..
T Consensus 280 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~ 359 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359 (419)
T ss_dssp CEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred eEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence 59999999998775443 345578999999999853 5678899999999999999999999976433211 111110
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... .........++..+.+|+.+||+.||.+|||+.|+++.
T Consensus 360 ~~~--------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKY--------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCC--------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCC--------------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000 00000012346789999999999999999999999873
No 178
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.7e-42 Score=357.03 Aligned_cols=252 Identities=18% Similarity=0.242 Sum_probs=199.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+.|+..+.||+|+||+||+|..... ...+++|+..... .......+.+|+.+++.++|||||++++++.+. ..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVT---HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK--RN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTT---CCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS--SE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCC---CcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--CE
Confidence 45799999999999999999996543 3455566655432 233457789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl~DFG 329 (473)
.|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 99999999999999988543 45899999999999999999999999 999999999999976 4559999999
Q ss_pred CCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 330 CAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 330 la~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
++...... ......+|+.|+|||++. ..++.++|||||||++|+|++|.+||.+....+....+........
T Consensus 185 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------ 257 (494)
T 3lij_A 185 LSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD------ 257 (494)
T ss_dssp TCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC------
T ss_pred CCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC------
Confidence 99876543 334567899999999986 4699999999999999999999999988766554433322111000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......++..+.+||.+||+.||.+|||+.++++.
T Consensus 258 --------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 --------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp --------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00012456789999999999999999999999864
No 179
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.3e-42 Score=358.04 Aligned_cols=252 Identities=19% Similarity=0.264 Sum_probs=206.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+.++++++|||||++++++.+. .
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK--G 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred cCceEEeeEEecCCCEEEEEEEECC---CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--C
Confidence 4679999999999999999998543 34566677665442 234567899999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEecc
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGY 328 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DF 328 (473)
..++||||+.+|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred EEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 89999999999999999854 346999999999999999999999999 9999999999999 56789999999
Q ss_pred CCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 329 GCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 329 Gla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
|++....... .....+|+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+....+.......
T Consensus 174 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------ 246 (484)
T 3nyv_A 174 GLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF------ 246 (484)
T ss_dssp THHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------
T ss_pred eeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC------
Confidence 9998765432 344578999999999876 69999999999999999999999998876655443332211000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.......++.++.+||.+||+.||.+|||+.++++.
T Consensus 247 --------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000123456889999999999999999999999874
No 180
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7.7e-42 Score=357.92 Aligned_cols=253 Identities=17% Similarity=0.242 Sum_probs=202.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC------------ChhhHhHHHHHHHHHhCCCCCccc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------------SQGVKEFINDVNTLASLQHPNLCK 240 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~Ei~~l~~l~HpnIv~ 240 (473)
..++|...+.||+|+||+||+|....+ ...+++|+...... ....+.+.+|+.+|+.++|||||+
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNG---HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTT---CCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred cccceEEEeEecccCCeEEEEEEECCC---CcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 457899999999999999999996543 34455555543221 133567899999999999999999
Q ss_pred ceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 241 l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
+++++.+. ..+++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 111 ~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 111 LFDVFEDK--KYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENK 182 (504)
T ss_dssp EEEEEECS--SEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESST
T ss_pred EEEEEEcC--CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecC
Confidence 99999876 7899999999999999988543 45999999999999999999999999 9999999999999877
Q ss_pred C---cEEEeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 321 F---SAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 321 ~---~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
+ .+||+|||++...... ......+|+.|+|||++. +.++.++|||||||++|+|++|..||.+....+....+..
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 261 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 5 6999999999876543 334567899999999986 4689999999999999999999999998776554443332
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
........ ....++.++.+|+.+||+.||.+|||+.|+++.
T Consensus 262 ~~~~~~~~--------------~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYFDFN--------------DWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCCCHH--------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCcc--------------ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 21100000 012345789999999999999999999999864
No 181
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.4e-43 Score=344.49 Aligned_cols=248 Identities=17% Similarity=0.247 Sum_probs=175.8
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEEEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
.+.||+|+||.||+|....+ .+.+++|+... .....+.+|+.++..+. ||||+++++++.+. ...|+|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e 86 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKS---NQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQ--LHTFLVME 86 (325)
T ss_dssp SCCSEEETTEEEEEEEETTT---CCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SEEEEEEC
T ss_pred CCccccCCCeEEEEEEECCC---CCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC--CEEEEEEE
Confidence 47899999999999996543 34555665532 34567889999999997 99999999999866 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC---cEEEeccCCCcccC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF---SAKLSGYGCAGHIP 335 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~vkl~DFGla~~~~ 335 (473)
|+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++....
T Consensus 87 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 87 LLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp CCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred ccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 99999999999653 46999999999999999999999999 99999999999997665 89999999998664
Q ss_pred CC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 336 ET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 336 ~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.. ......+|+.|+|||++.+..++.++|||||||++|||++|..||.............. ....+...
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---------~~~~i~~~ 231 (325)
T 3kn6_A 161 PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE---------IMKKIKKG 231 (325)
T ss_dssp C----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH---------HHHHHTTT
T ss_pred CCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH---------HHHHHHcC
Confidence 33 23445779999999999999999999999999999999999999976543210000000 00000000
Q ss_pred c--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 Q--LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~--l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ........++.++.+|+.+||+.||.+|||+.++++.
T Consensus 232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0 0001112456889999999999999999999999854
No 182
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.6e-42 Score=343.26 Aligned_cols=257 Identities=14% Similarity=0.146 Sum_probs=203.5
Q ss_pred HhcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeeeec
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHAR 247 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~ 247 (473)
..++|...+.||+|+||+||+|.+.+ +....+.+++|+... ....++.+|++++..++ |+||+.+++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP----ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS----CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC----CChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 45789999999999999999996433 233456666666542 23567888888888887 9999999999987
Q ss_pred CCCCceEEEEEeccCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC------
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK------ 319 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~------ 319 (473)
. +..||||||+++|+|.+++... .....+++..+..|+.||+.||+|||+++ ||||||||+||||+.
T Consensus 139 ~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 139 Q--NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp S--SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC-
T ss_pred C--CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcc
Confidence 6 7889999999999999999642 13456999999999999999999999999 999999999999998
Q ss_pred -----CCcEEEeccCCCcccC----CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH
Q 011995 320 -----DFSAKLSGYGCAGHIP----ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE 390 (473)
Q Consensus 320 -----~~~vkl~DFGla~~~~----~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~ 390 (473)
++.+||+|||+++.+. ........+|+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~- 292 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE- 292 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-
Confidence 8999999999996543 223345678999999999999999999999999999999999999985432110
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHhhhcccC
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER-PTMRSIFEELDRQESRKS 460 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~eil~~L~~l~~~~~ 460 (473)
| .+ ...+. .+ .....+.+++..||..+|.+| |++.++.+.|+++.....
T Consensus 293 -----~---------~~----~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 293 -----C---------KP----EGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp -----E---------EE----CSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----e---------ee----chhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0 00 00011 11 125678899999999999999 679999999998776543
No 183
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-41 Score=337.01 Aligned_cols=261 Identities=15% Similarity=0.212 Sum_probs=205.6
Q ss_pred HHHHHHhcccccC-cceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhC-CCCCcccceee
Q 011995 168 DEVAAACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASL-QHPNLCKLLGF 244 (473)
Q Consensus 168 ~el~~~~~~f~~~-~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~ 244 (473)
+......+.|... +.||+|+||.||+|....+ .+.+++|+.... ........+.+|+.++..+ +||||++++++
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKST---GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCC---CCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3444556678776 8999999999999986543 345556655433 2334467889999999999 56999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CC
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DF 321 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~ 321 (473)
+... ...++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||++. ++
T Consensus 98 ~~~~--~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 98 YENT--SEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EECS--SEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBC
T ss_pred EEeC--CeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCC
Confidence 9766 7899999999999999998543 3457999999999999999999999999 999999999999987 78
Q ss_pred cEEEeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 322 SAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
.+||+|||++...... ......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+.....
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~- 250 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV- 250 (327)
T ss_dssp CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-
T ss_pred cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc-
Confidence 9999999999876543 23445789999999999999999999999999999999999999988765544332221110
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........++..+.+|+.+||+.||.+|||+.++++.
T Consensus 251 -------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 -------------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 01111123456789999999999999999999999874
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.6e-42 Score=356.84 Aligned_cols=253 Identities=18% Similarity=0.248 Sum_probs=203.6
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
..++|.+.+.||+|+||+||+|.... +.+.+++|+..... .......+.+|+++|++++|||||++++++.+. .
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS--S 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETT---TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--S
T ss_pred hhcceEEeEEEeecCCEEEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC--C
Confidence 35689999999999999999998643 34556666654321 233457789999999999999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC---CCCcEEEecc
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGY 328 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~---~~~~vkl~DF 328 (473)
..++||||+.+|+|.+.+... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Df 168 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF 168 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSC
T ss_pred EEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEEC
Confidence 899999999999999988543 46999999999999999999999999 99999999999995 4567999999
Q ss_pred CCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 329 GCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 329 Gla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
|++...... ......+|+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+....+.......
T Consensus 169 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------ 241 (486)
T 3mwu_A 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF------ 241 (486)
T ss_dssp SCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS------
T ss_pred CcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC------
Confidence 999876443 3345578999999999875 58999999999999999999999998876655443332111000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.......++.++.+||.+||+.||.+|||+.++++.
T Consensus 242 --------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 --------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --------CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --------CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000123456789999999999999999999999985
No 185
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=339.86 Aligned_cols=258 Identities=17% Similarity=0.261 Sum_probs=198.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|...+. +++++.... ......+.+.+|+.++++++|+||+++++++... ..
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~~------~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~ 103 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHGE------VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP--PH 103 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESSS------EEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS--SC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcCe------EEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC--Cc
Confidence 56899999999999999999987542 334444433 2334456788999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++ ++.+||+|||++.
T Consensus 104 ~~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp EEEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred eEEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 9999999999999999954 2346899999999999999999999999 99999999999998 6799999999987
Q ss_pred ccCC-------CCccCcccccccCChhhhhc---------CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 333 HIPE-------TDISNSSVAAANLSVETLER---------GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 333 ~~~~-------~~~~~~~~t~~y~aPE~~~~---------~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
.... .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 257 (319)
T 2y4i_B 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT 257 (319)
T ss_dssp ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT
T ss_pred ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc
Confidence 5421 12233457899999999964 3478899999999999999999999987665443322211
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
. ..+.. ....++.++.+++.+||..||.+|||+.+|++.|+++..+...
T Consensus 258 ~-------------~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 258 G-------------MKPNL---SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp T-------------CCCCC---CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred C-------------CCCCC---CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0 00000 0112446789999999999999999999999999998876544
No 186
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1e-41 Score=334.94 Aligned_cols=259 Identities=18% Similarity=0.315 Sum_probs=192.9
Q ss_pred ccccc-CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 175 HNFFS-DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
+.|.+ .+.||+|+||.||+|.. ....+.+++|+.... .......+.+|++++.++ +||||+++++++.+. +.
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~--~~ 85 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCIN---LITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE--DR 85 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEEC---SSSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred eeEEecCceecCCceEEEEEEEE---cCCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC--CE
Confidence 56776 47899999999999984 334556667766543 234467789999999985 799999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc---EEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS---AKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---vkl~DFG 329 (473)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 159 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFD 159 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTT
T ss_pred EEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEcc
Confidence 99999999999999999643 36899999999999999999999999 999999999999988765 9999999
Q ss_pred CCcccCCC---------CccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 330 CAGHIPET---------DISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 330 la~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
++...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---- 235 (316)
T 2ac3_A 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG---- 235 (316)
T ss_dssp CCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC----
T ss_pred CccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc----
Confidence 98765321 1223458899999999975 45889999999999999999999999765422100
Q ss_pred hcccccc---cccccccccccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 396 WSRPFLA---DDCRLSLIMDPQLKGRFP----LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 396 ~~~~~~~---~~~~~~~~~~~~l~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
|...... .......+..... .++ ..++.++.+|+.+||+.||.+|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 236 WDRGEACPACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp C----CCHHHHHHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccccchhHHHHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000 0000000000000 112 1345789999999999999999999999873
No 187
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-41 Score=341.15 Aligned_cols=259 Identities=17% Similarity=0.285 Sum_probs=206.5
Q ss_pred HHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-------hhhHhHHHHHHHHHhC-CCCCc
Q 011995 167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASL-QHPNL 238 (473)
Q Consensus 167 ~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Ei~~l~~l-~HpnI 238 (473)
........++|...+.||+|+||.||+|....+ ++.+++|+.+..... ...+.+.+|+.++.++ +||||
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i 162 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTB
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCC---CcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 344556678899999999999999999997533 345667766654321 1245678999999999 89999
Q ss_pred ccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC
Q 011995 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318 (473)
Q Consensus 239 v~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~ 318 (473)
+++++++... ...++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+|+||||+|||++
T Consensus 163 v~~~~~~~~~--~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 163 ITLIDSYESS--SFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLD 234 (365)
T ss_dssp CCEEEEEEBS--SEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC
T ss_pred eEEEEEEeeC--CEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 9999998765 789999999999999999954 246999999999999999999999999 99999999999999
Q ss_pred CCCcEEEeccCCCcccCCC-CccCcccccccCChhhhhcC------CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH
Q 011995 319 KDFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERG------LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER 391 (473)
Q Consensus 319 ~~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~------~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~ 391 (473)
.++.+||+|||++..+... ......+|+.|+|||++.+. .++.++|||||||++|||++|..||.........
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 314 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314 (365)
T ss_dssp TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 9999999999999876543 33456789999999998643 5789999999999999999999999876554433
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+....... ..+. ....+..+.+|+.+||+.||.+|||+.++++
T Consensus 315 ~~i~~~~~~~---------~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RMIMEGQYQF---------SSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHTCCCC---------CHHH-----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCC---------CCcc-----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2221110000 0000 0123467899999999999999999999986
No 188
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=329.46 Aligned_cols=252 Identities=14% Similarity=0.254 Sum_probs=196.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+|.....||+|+||.||+|....+ ...+++|+.... .....+.+.+|+.+++.++||||+++++++... +..++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 96 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSN---QVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN--GFIKI 96 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTT---CCEEEEEEEECC-CC---HHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCC---CeEEEEEEccCC-chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC--CcEEE
Confidence 344456999999999999986543 344455554433 334457789999999999999999999999876 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEEeccCCCccc
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKLSGYGCAGHI 334 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl~DFGla~~~ 334 (473)
||||+++++|.+++........+++..+..++.|++.||.|||+++ |+|+||||+|||++. ++.+||+|||++...
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~ 173 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173 (295)
T ss_dssp EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeeccccccc
Confidence 9999999999999976544456789999999999999999999999 999999999999987 899999999999776
Q ss_pred CCCC--ccCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.... .....+++.|+|||++.+.. ++.++|||||||++|||++|+.||.............. . .
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~--------~- 241 (295)
T 2clq_A 174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG---M--------F- 241 (295)
T ss_dssp CC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH---H--------H-
T ss_pred CCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc---c--------c-
Confidence 4322 23457889999999997654 78999999999999999999999975433221110000 0 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....++...+.++.+|+.+||+.||.+|||+.++++.
T Consensus 242 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 ---KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01112244556889999999999999999999999863
No 189
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-41 Score=353.57 Aligned_cols=264 Identities=14% Similarity=0.135 Sum_probs=203.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|.+.+.||+|+||.||+|....+ .+.+++|+..... ...++.+|++++..++|.+++..+.++... .+..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~---~~~~~~~E~~il~~L~~~~~i~~i~~~~~~-~~~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKT---KHPQLLYESKIYRILQGGTGIPNVRWFGVE-GDYN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTT---CCEEEEEEEETTC---SSCCHHHHHHHHHHTTTSTTCCCEEEEEEE-TTEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCC---CcEEEEEEecccc---ccHHHHHHHHHHHHhcCCCCCCeEEEEEee-CCEE
Confidence 46899999999999999999986433 3456666655432 235688999999999876555554444333 2788
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee---CCCCcEEEeccCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSAKLSGYGC 330 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~vkl~DFGl 330 (473)
+|||||+ +++|.+++... ...+++..++.|+.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+
T Consensus 79 ~lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 9999999 99999999642 346999999999999999999999999 9999999999999 5889999999999
Q ss_pred CcccCCCCc---------cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 331 AGHIPETDI---------SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 331 a~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
++.+..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+......
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~- 231 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK- 231 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-
Confidence 987643321 2557899999999999999999999999999999999999999875442222221111000
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
....... . +...++.++.+|+..||+.||.+||++.+|++.|+++..+..
T Consensus 232 ----~~~~~~~-~----l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 232 ----KVATSIE-A----LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp ----HHHSCHH-H----HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----cccccHH-H----HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 0000000 0 012335789999999999999999999999999999865543
No 190
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-41 Score=357.40 Aligned_cols=254 Identities=17% Similarity=0.256 Sum_probs=203.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|+... +++.+++|+..... .......+.+|+.+|..++||||+++++++.+. .
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~--~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKA---TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK--T 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--S
T ss_pred hhheEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC--C
Confidence 3678888999999999999999654 34556666654321 223356788999999999999999999998776 7
Q ss_pred ceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
.+|+||||+++|+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+||||+.+|.+||+|||+
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGl 335 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL 335 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecce
Confidence 8999999999999999986542 2456999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhccccccccccc
Q 011995 331 AGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWSRPFLADDCRL 407 (473)
Q Consensus 331 a~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 407 (473)
+..+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...
T Consensus 336 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~----------- 404 (543)
T 3c4z_A 336 AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----------- 404 (543)
T ss_dssp CEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH-----------
T ss_pred eeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH-----------
Confidence 98765433 2345899999999999999999999999999999999999999976532111 111100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~ 450 (473)
+... ...++..++..+.+||.+||+.||.+||++ .+|++
T Consensus 405 --i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 405 --VLEQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --HHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --Hhhc--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0000 012344567889999999999999999975 66654
No 191
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.7e-41 Score=338.66 Aligned_cols=269 Identities=14% Similarity=0.187 Sum_probs=201.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|+..+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+++.++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKT---GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 92 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTT---CCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCC---CCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence 46899999999999999999996543 3455565544332 2334567889999999999999999999987642
Q ss_pred ---CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.+..++||||+.+ +|.+.+... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+
T Consensus 93 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 93 NRCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp ----CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred ccCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEc
Confidence 2568999999975 777777543 346999999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCC------CCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 327 GYGCAGHIPE------TDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 327 DFGla~~~~~------~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|||++..+.. .......+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.........+.....
T Consensus 167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~ 246 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246 (351)
T ss_dssp CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999976532 122445678999999999764 589999999999999999999999998776554443321111
Q ss_pred cccccc-----ccc--ccccc--ccCCCCCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 FLADDC-----RLS--LIMDP--QLKGRFPL-----KAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ~~~~~~-----~~~--~~~~~--~l~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...... ... ..... ........ ..+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 000 00000 00000000 124668899999999999999999999974
No 192
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.9e-41 Score=330.16 Aligned_cols=266 Identities=18% Similarity=0.251 Sum_probs=199.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.++++++||||+++++++... +..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLT---GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--NKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTT---CCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCC---CceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC--Cce
Confidence 6799999999999999999986543 3444555544332 223346788999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred EEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence 99999997 69999986542 345899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc--ccc
Q 011995 334 IPET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC--RLS 408 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 408 (473)
.... ......+++.|+|||.+.+.. ++.++|||||||++|||++|+.||.+....+....+........... ...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (299)
T 2r3i_A 153 FGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232 (299)
T ss_dssp HCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhh
Confidence 5432 233456789999999998765 79999999999999999999999988765543332211100000000 000
Q ss_pred cc--cccccC----CC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 409 LI--MDPQLK----GR---FPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 409 ~~--~~~~l~----~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. ..+... .. .....+.++.+|+.+||+.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00 000000 00 01234578999999999999999999999987
No 193
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-43 Score=345.25 Aligned_cols=260 Identities=17% Similarity=0.276 Sum_probs=184.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh--CCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|++.+ +.+++|+. .. .....+.+|.+++.. ++||||+++++++......
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~--~~--~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 72 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWRG-----EEVAVKIF--SS--REERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 72 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CTT-----SCEEEEEC--C---TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSS
T ss_pred cceeeehhhccCCCCeEEEEEEEcC-----cceEEEEe--cc--cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCc
Confidence 3689999999999999999998643 23344443 22 334667788888888 7999999999998876322
Q ss_pred --ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceeecCCCCCceeeCCCC
Q 011995 252 --QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH--------EEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 252 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
..++||||+++|+|.+++... .+++..+..++.|++.||.||| +.+ |+||||||+|||++.++
T Consensus 73 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 73 WTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNG 145 (303)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTC
T ss_pred cceeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCC
Confidence 689999999999999999543 5788899999999999999999 888 99999999999999999
Q ss_pred cEEEeccCCCcccCCCCc------cCcccccccCChhhhhcC------CCCCcCCchHHHHHHHHHHcC----------C
Q 011995 322 SAKLSGYGCAGHIPETDI------SNSSVAAANLSVETLERG------LLTPKSNVWSFGIVLLELLTG----------R 379 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~~------~~~~~t~~y~aPE~~~~~------~~s~~sDvwSlGvvl~elltG----------~ 379 (473)
.+||+|||++........ ....+|+.|+|||++.+. .++.++|||||||++|||++| +
T Consensus 146 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~ 225 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 225 (303)
T ss_dssp CC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCC
T ss_pred CEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceee
Confidence 999999999976543321 233689999999999776 334689999999999999999 5
Q ss_pred CCCCCCChHHHHhHhhhcccccccccccccccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP-----LKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 380 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.||......... .......+....+...++ ..+...+.+|+.+||+.||.+|||+.+|++.|++
T Consensus 226 ~p~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 226 LPYYDLVPSDPS-----------VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CTTTTTCC-CCC-----------CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred ccccccCCCCcc-----------HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 565433211100 000001111111222222 2677889999999999999999999999999999
Q ss_pred hhcccC
Q 011995 455 QESRKS 460 (473)
Q Consensus 455 l~~~~~ 460 (473)
+....+
T Consensus 295 l~~~~~ 300 (303)
T 3gxj_A 295 LSQQEG 300 (303)
T ss_dssp -CCC--
T ss_pred hhhhcc
Confidence 886654
No 194
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-42 Score=345.53 Aligned_cols=261 Identities=20% Similarity=0.276 Sum_probs=201.9
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHH-HHhCCCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNT-LASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
..++|+..+.||+|+||.||+|.... .++.+++|+...........++..|+.+ ++.++||||+++++++... +
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~--~ 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVP---SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--G 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS--S
T ss_pred ehhheeEeeEecccCCEEEEEEEEcC---CCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC--C
Confidence 35688999999999999999998643 3456667766655445555667777766 7778999999999999876 7
Q ss_pred ceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 252 QRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
..++||||+++ +|.+++... .....+++..+..++.||+.||+|||++ + |+||||||+|||++.++.+||+|||
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCS
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCC
Confidence 89999999975 998887531 1345799999999999999999999997 8 9999999999999999999999999
Q ss_pred CCcccCCCCc-cCcccccccCChhhhhc----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-Hh-Hhhhcccccc
Q 011995 330 CAGHIPETDI-SNSSVAAANLSVETLER----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RN-LVKWSRPFLA 402 (473)
Q Consensus 330 la~~~~~~~~-~~~~~t~~y~aPE~~~~----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~-~~~~~~~~~~ 402 (473)
++........ ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .. .+...
T Consensus 200 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----- 274 (340)
T 3an0_A 200 ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP----- 274 (340)
T ss_dssp HHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-----
T ss_pred CceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC-----
Confidence 9876643322 23468899999999753 3688999999999999999999999986432221 11 11100
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhhhccc
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE--ELDRQESRK 459 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~--~L~~l~~~~ 459 (473)
.+. .....++.++.+|+.+||..||.+|||+.+|++ .+.....+.
T Consensus 275 ---------~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 321 (340)
T 3an0_A 275 ---------SPQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKG 321 (340)
T ss_dssp ---------CCC---CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTSC
T ss_pred ---------CCC---CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccccc
Confidence 000 012235678999999999999999999999998 454444433
No 195
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-41 Score=335.54 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=199.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ .+.+++|+.. ....+.+.+|+.++..++ ||||+++++++.......
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~----~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITN---NEKVVVKILK----PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEC----SCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCceEEEEEecccCCeEEEEEEECCC---CcEEEEEEec----ccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 36799999999999999999986443 3455555543 233577899999999997 999999999998755578
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGla 331 (473)
.++||||+.+++|.+++. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 999999999999999883 3889999999999999999999999 99999999999999776 8999999999
Q ss_pred cccCCC-CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-HHhHhh----------hcc
Q 011995 332 GHIPET-DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-ERNLVK----------WSR 398 (473)
Q Consensus 332 ~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-~~~~~~----------~~~ 398 (473)
...... ......++..|+|||.+.+ ..++.++|||||||++|||++|..||....... ....+. +..
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 179 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp EECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 876443 3345578899999999977 668999999999999999999999995543321 111110 000
Q ss_pred cc-cccccccccc--------cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 399 PF-LADDCRLSLI--------MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 399 ~~-~~~~~~~~~~--------~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. .........+ .........+..++.++.+||.+||+.||.+|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000000000 0001111123346788999999999999999999999987
No 196
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=332.86 Aligned_cols=250 Identities=19% Similarity=0.304 Sum_probs=198.7
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..++|+..+.||+|+||.||+|....+ ++.+++|+.... .....+.+|+.++..++||||+++++++... +.
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 98 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKET---GQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYFKN--TD 98 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTT---CCEEEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCC---CCEEEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CE
Confidence 356799999999999999999986543 344556655432 2457789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++.
T Consensus 99 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp EEEEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccch
Confidence 9999999999999999853 2346899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ......+++.|+|||.+.+..++.++|||||||++|||++|..||...........+....
T Consensus 174 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 241 (314)
T 3com_A 174 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP------------ 241 (314)
T ss_dssp ECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC------------
T ss_pred hhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC------------
Confidence 66443 2234567899999999999889999999999999999999999998765543322211100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+. ...+...+..+.+|+.+||..||.+|||+.++++
T Consensus 242 -~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 -PPT--FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -CCC--CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -Ccc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 0113345678999999999999999999999986
No 197
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.3e-41 Score=334.81 Aligned_cols=271 Identities=17% Similarity=0.280 Sum_probs=207.1
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh--CCCCCcccce
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLL 242 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~ 242 (473)
.++.--....++|...+.||+|+||.||+|... ++.+++|+.. ......+.+|++++.. ++||||++++
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~----~~~~~~~~~e~~~~~~~~l~h~ni~~~~ 102 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-----GEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFI 102 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-----TEEEEEEEEC----GGGHHHHHHHHHHHHHSCCCCTTBCCEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEEc-----CccEEEEEeC----chhHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 334344455678999999999999999999864 2344555543 2345678889999988 7999999999
Q ss_pred eeeecCCC--CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceeecCCCC
Q 011995 243 GFHARDGS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH--------EEGPFQAMYNEFST 312 (473)
Q Consensus 243 g~~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlkp 312 (473)
+++..... ...++||||+++|+|.+++... .+++..+..++.|++.||.||| +.+ |+||||||
T Consensus 103 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp 175 (342)
T 1b6c_B 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKS 175 (342)
T ss_dssp EEEECCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSG
T ss_pred eeecccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCH
Confidence 99877532 2789999999999999999542 5899999999999999999999 777 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCC------ccCcccccccCChhhhhcCC------CCCcCCchHHHHHHHHHHcC--
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETD------ISNSSVAAANLSVETLERGL------LTPKSNVWSFGIVLLELLTG-- 378 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~------~~~~~~t~~y~aPE~~~~~~------~s~~sDvwSlGvvl~elltG-- 378 (473)
+|||++.++.+||+|||++....... .....+|+.|+|||.+.+.. ++.++|||||||++|||++|
T Consensus 176 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~ 255 (342)
T 1b6c_B 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 255 (342)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccC
Confidence 99999999999999999997664332 23447889999999997753 33689999999999999999
Q ss_pred --------CCCCCCCChHHH--HhHhhhcccccccccccccccccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 379 --------RKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKGR-FPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 379 --------~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
+.||........ ...... .. .....+.+... ....+...+.+|+.+||+.||++|||+.+
T Consensus 256 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 326 (342)
T 1b6c_B 256 IGGIHEDYQLPYYDLVPSDPSVEEMRKV---VC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 326 (342)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHH---HT------TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred cCCcccccccCccccCcCcccHHHHHHH---HH------HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHH
Confidence 778865422110 000000 00 00011111111 12367788999999999999999999999
Q ss_pred HHHHHHhhhcccC
Q 011995 448 IFEELDRQESRKS 460 (473)
Q Consensus 448 il~~L~~l~~~~~ 460 (473)
|++.|+++....+
T Consensus 327 i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 327 IKKTLSQLSQQEG 339 (342)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987654
No 198
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=340.01 Aligned_cols=260 Identities=20% Similarity=0.299 Sum_probs=200.0
Q ss_pred CHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceee
Q 011995 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGF 244 (473)
Q Consensus 166 ~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~ 244 (473)
.+.++....++|+..+.||+|+||.||+|....+ .+.+++|+... .......+.+|+.++.++ +||||++++++
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKT---GQLAAIKVMDV--TGDEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEC--CSSTTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCC---CCeEEEEEEec--CcccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 3334445578899999999999999999996543 34455555543 233457889999999999 89999999999
Q ss_pred eecCC----CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 245 HARDG----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 245 ~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
+.... .+..++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+|+||||+|||++.+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTEN 165 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTT
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCC
Confidence 87642 36889999999999999999653 2356899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCC--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhH
Q 011995 321 FSAKLSGYGCAGHIPET--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNL 393 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~ 393 (473)
+.+||+|||++...... ......+++.|+|||++. +..++.++|||||||++|||++|..||...........
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp CCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 99999999998766432 223456889999999986 55689999999999999999999999987665443322
Q ss_pred hhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 394 VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.... .+.+ ....++..+.+|+.+||..||.+|||+.++++
T Consensus 246 ~~~~~-------------~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 246 IPRNP-------------APRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHSC-------------CCCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhcCc-------------cccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 21100 0000 12234578999999999999999999999987
No 199
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.2e-42 Score=369.15 Aligned_cols=249 Identities=18% Similarity=0.222 Sum_probs=206.0
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
..++|+..+.||+|+||.||+|.... +.+.+++|+..... .....+.+..|..+|..+ +|+||+.+++++.+.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~- 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM- 414 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESS---SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS-
T ss_pred cccceEEEEEEccCCCEEEEEEEECC---CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC-
Confidence 45789999999999999999999654 34556666655321 233456788999999988 799999999988765
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+.+||||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||
T Consensus 415 -~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 415 -DRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCT
T ss_pred -CEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecc
Confidence 7899999999999999999643 36999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
+++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+....
T Consensus 488 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--------- 558 (674)
T 3pfq_A 488 MCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--------- 558 (674)
T ss_dssp TCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC---------
T ss_pred eeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC---------
Confidence 9986432 23455689999999999999999999999999999999999999998876655443332110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~ 450 (473)
..++...+.++.+||.+||+.||.+||++ +||++
T Consensus 559 ---------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 ---------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 12345567889999999999999999997 66664
No 200
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.7e-42 Score=335.50 Aligned_cols=261 Identities=21% Similarity=0.328 Sum_probs=184.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|... ...+.+++|+............+.+|+.++..++||||+++++++... +..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 88 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCA---PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--DEL 88 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS--SCE
T ss_pred hhhhhhhheeccccceEEEEEEEC---CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec--CCc
Confidence 568999999999999999999843 233455555444333344567789999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhc-----CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 254 MLIYERLFHGSLDRLIYG-----RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~-----~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
++||||+++++|.+++.. ......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEec
Confidence 999999999999999853 112456899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCC-------ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 329 GCAGHIPETD-------ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 329 Gla~~~~~~~-------~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
|++....... .....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||................+.
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 245 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC
Confidence 9987653221 123467899999999876 56899999999999999999999999876544332211110000
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. ......++. .....+.++.+++.+||+.||.+|||+.++++
T Consensus 246 ~----~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 S----LETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C----TTC-----C----CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c----cccccccch----hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 000011111 12234578899999999999999999999987
No 201
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.6e-43 Score=353.75 Aligned_cols=253 Identities=15% Similarity=0.195 Sum_probs=191.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHH---HHHHhCCCCCcccce------
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDV---NTLASLQHPNLCKLL------ 242 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei---~~l~~l~HpnIv~l~------ 242 (473)
.++|...+.||+|+||.||+|... ..++.+++|+.... ......+.+.+|+ .+|+.++|||||+++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~ 148 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQ---ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 148 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC----CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC
T ss_pred CceEEEcceeecCCCEEEEEEEEC---CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh
Confidence 467888999999999999999853 33456667766543 2344567889999 555566899999998
Q ss_pred -eeeecCCC----------C-----ceEEEEEeccCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 011995 243 -GFHARDGS----------D-----QRMLIYERLFHGSLDRLIYGRS----DGPPIDWNTRVKIALCAAQGLTFLHEEGP 302 (473)
Q Consensus 243 -g~~~~~~~----------~-----~~~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~yLH~~~~ 302 (473)
+++...+. + ..||||||+ +|+|.+++.... ....+++..+..|+.||+.||+|||+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~- 226 (377)
T 3byv_A 149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG- 226 (377)
T ss_dssp SEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred hhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-
Confidence 55544311 1 378999999 689999996421 1123446888999999999999999999
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcC-----------CCCCcCCchHHHHH
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERG-----------LLTPKSNVWSFGIV 371 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~-----------~~s~~sDvwSlGvv 371 (473)
|+||||||+||||+.++.+||+|||+++.... ......+ +.|+|||++.+. .++.++|||||||+
T Consensus 227 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 --LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp --EECSCCCGGGEEECTTCCEEECCGGGCEETTC-EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred --eecCCCCHHHEEEcCCCCEEEEechhheecCC-cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 99999999999999999999999999986433 2344456 999999999887 79999999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH-
Q 011995 372 LLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE- 450 (473)
Q Consensus 372 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~- 450 (473)
+|||++|+.||...........+ .. ....++.++.+||.+||+.||.+|||+.++++
T Consensus 303 l~elltg~~Pf~~~~~~~~~~~~----------------~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGSEWI----------------FR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC------CCSGGG----------------GS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCcccccccchhhh----------------hh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999999764422211100 00 01234578999999999999999999999996
Q ss_pred -HHHhhhc
Q 011995 451 -ELDRQES 457 (473)
Q Consensus 451 -~L~~l~~ 457 (473)
.++.+..
T Consensus 361 p~f~~~~~ 368 (377)
T 3byv_A 361 PEYEQLRT 368 (377)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 4555543
No 202
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.8e-42 Score=330.24 Aligned_cols=249 Identities=16% Similarity=0.203 Sum_probs=198.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
..++|...+.||+|+||.||+|....+ .+.+++|+.... ........+.+|+.++..+ +||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~-- 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLD---GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED-- 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET--
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCC---CceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC--
Confidence 457899999999999999999996533 345566665543 2345567889999999999 999999999999876
Q ss_pred CceEEEEEeccCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---------
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD--------- 320 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--------- 320 (473)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~ 160 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEE 160 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------
T ss_pred CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccc
Confidence 789999999999999999964311 246899999999999999999999999 9999999999999844
Q ss_pred ----------CcEEEeccCCCcccCCCCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHH
Q 011995 321 ----------FSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389 (473)
Q Consensus 321 ----------~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~ 389 (473)
..+||+|||++...... ....+|+.|+|||.+.+. .++.++|||||||++|||++|.+++.......
T Consensus 161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~ 238 (289)
T 1x8b_A 161 GDEDDWASNKVMFKIGDLGHVTRISSP--QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH 238 (289)
T ss_dssp ---------CCCEEECCCTTCEETTCS--CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH
T ss_pred cccccccCCceEEEEcccccccccCCc--cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH
Confidence 47999999999876543 234689999999999766 56689999999999999999998775432211
Q ss_pred HHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 390 ERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. +... ....++..++..+.+|+.+||+.||.+|||+.++++.
T Consensus 239 ~--~~~~------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 E--IRQG------------------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H--HHTT------------------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H--HHcC------------------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 1100 0011233456789999999999999999999999863
No 203
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=340.93 Aligned_cols=263 Identities=16% Similarity=0.231 Sum_probs=189.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeec-----
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHAR----- 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~----- 247 (473)
..+|+..+.||+|+||.||+|....+ .+.+++|+.... .......+.+|+.++.++. ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGS---GREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTT---CCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCC---CcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 45899999999999999999996543 344555544322 3344577899999999996 9999999999852
Q ss_pred -CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 248 -DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 248 -~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.....+++||||+. |+|.+++........+++..+..++.||+.||.|||++++ +|+||||||+|||++.++.+||+
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~-~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSS-CCBCCCCCGGGCEECTTSCEEBC
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCC-CEEEccCCcccEEECCCCCEEEe
Confidence 22245899999995 7999988653344579999999999999999999999863 39999999999999999999999
Q ss_pred ccCCCcccCCCCc--------------cCcccccccCChhhh---hcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH
Q 011995 327 GYGCAGHIPETDI--------------SNSSVAAANLSVETL---ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389 (473)
Q Consensus 327 DFGla~~~~~~~~--------------~~~~~t~~y~aPE~~---~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~ 389 (473)
|||++........ ....+|+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 9999987643221 134578999999998 56668899999999999999999999997543221
Q ss_pred HHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCC
Q 011995 390 ERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~ 462 (473)
. .... .........+..+.+|+.+||+.||.+|||+.|+++.|+.+.......
T Consensus 261 ~---~~~~-----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 261 I---VNGK-----------------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp -------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred h---hcCc-----------------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 1 0000 000001122345789999999999999999999999999988665543
No 204
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=330.06 Aligned_cols=253 Identities=15% Similarity=0.193 Sum_probs=199.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~ 249 (473)
..++|.+.+.||+|+||.||+|.... ....+++|+..... .......+.+|+.+++.++||||+++++++....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSE---TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTT---TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred cccceeEeeEEecCCCeEEEEEEECC---CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 35789999999999999999998543 33455566554321 2344577999999999999999999999986555
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
....++||||+.++ |.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccc
Confidence 57899999999876 77777543 3456999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC----CccCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 330 CAGHIPET----DISNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 330 la~~~~~~----~~~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
++...... ......+++.|+|||++.+.. ++.++|||||||++|||++|+.||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~----- 229 (305)
T 2wtk_C 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS----- 229 (305)
T ss_dssp TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-----
T ss_pred cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC-----
Confidence 99766422 123446889999999997644 3779999999999999999999998766544333222110
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..++..++..+.+|+.+||..||.+|||+.++++.
T Consensus 230 -------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 -------------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -------------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01233455788999999999999999999999975
No 205
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.5e-42 Score=350.87 Aligned_cols=266 Identities=17% Similarity=0.173 Sum_probs=195.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC----
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~---- 249 (473)
..+|...+.||+|+||.||+|.+..+ ++.+++|+.... ...+.+|+++|+.++|||||++++++...+
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~vaiK~~~~~-----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDS---GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEECC-----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCC---CcEEEEEEeccc-----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence 34688999999999999999997543 344555554322 223457999999999999999999886432
Q ss_pred CCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEec
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSG 327 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~D 327 (473)
...+++||||+++ +|.+.+... .....+++..+..++.||+.||+|||+++ |+||||||+||||+.+ +.+||+|
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~D 200 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 200 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEecc
Confidence 1247799999975 666655321 13457999999999999999999999999 9999999999999965 6789999
Q ss_pred cCCCcccCCC-CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc--cccc-
Q 011995 328 YGCAGHIPET-DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR--PFLA- 402 (473)
Q Consensus 328 FGla~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~--~~~~- 402 (473)
||+++.+... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+.... +...
T Consensus 201 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 201 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp CTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred chhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9999876433 23455789999999999765 68999999999999999999999998876544332221110 0000
Q ss_pred ---cccccccccccccC-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 ---DDCRLSLIMDPQLK-----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ---~~~~~~~~~~~~l~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........-+.+. ..++...+.++.+||.+||+.||.+|||+.|+++.
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000000011111 01233456889999999999999999999999863
No 206
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=337.42 Aligned_cols=265 Identities=15% Similarity=0.204 Sum_probs=202.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC--CCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~ 251 (473)
.++|...+.||+|+||.||++....+ .+.+++|+.... .....+.+.+|+++++.++||||+++++++... ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHD---GHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTT---CCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCC---CcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 46899999999999999999986433 345556654432 344567889999999999999999999998632 225
Q ss_pred ceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..++||||+.+|+|.+++... .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCc
Confidence 789999999999999988642 12457999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC-----------ccCcccccccCChhhhhcCC---CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 331 AGHIPETD-----------ISNSSVAAANLSVETLERGL---LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 331 a~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
+....... .....+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||..............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 87653211 11234588999999987554 68999999999999999999999953111000000000
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
. ...........+..+.+++.+||+.||.+|||+.+|++.|+.+.....
T Consensus 261 -----~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 261 -----Q----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp -----H----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred -----h----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 0 000011123456789999999999999999999999999998875443
No 207
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-42 Score=345.77 Aligned_cols=257 Identities=18% Similarity=0.235 Sum_probs=201.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
.++|...+.||+|+||.||+|....+....+.+++|+..... .......+.+|+++|..+ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 468999999999999999999975434445666666654321 223446678899999999 799999999998776
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+..+|||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||
T Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 132 -TKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp -TEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSS
T ss_pred -ceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCC
Confidence 7899999999999999999643 36899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC---CccCcccccccCChhhhhcC--CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 330 CAGHIPET---DISNSSVAAANLSVETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 330 la~~~~~~---~~~~~~~t~~y~aPE~~~~~--~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
+++.+... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.. ....
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~--~~~~-- 280 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR--RILK-- 280 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH--HHHH--
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH--HHhc--
Confidence 99765332 22345789999999999863 478999999999999999999999975432211111100 0000
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEEL 452 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~L 452 (473)
....++...+..+.+||.+||..||.+|| ++.++++..
T Consensus 281 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 281 ----------SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----------cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 01122445567899999999999999999 999998754
No 208
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.3e-41 Score=339.73 Aligned_cols=267 Identities=13% Similarity=0.176 Sum_probs=202.9
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
..++|+..+.||+|+||.||+|....+ ...+++|+............+.+|++++.+++||||+++++++....
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCC---CeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 356899999999999999999985543 34556666554344445578899999999999999999999986542
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
....++||||+. |+|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCc
Confidence 246899999996 599998854 35999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCCC-----ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 330 CAGHIPETD-----ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 330 la~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
++....... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.........
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 998664321 234578999999998765 44899999999999999999999999887655543332210000000
Q ss_pred cccccccc---------ccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIM---------DPQLKGR-----FPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~---------~~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .+..+. ....... +....+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 254 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 254 E-DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp H-HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H-HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000 0000000 112346789999999999999999999999873
No 209
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.7e-41 Score=346.99 Aligned_cols=199 Identities=19% Similarity=0.240 Sum_probs=163.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-- 250 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+..... .....+.+.+|+.+|+.++|+||+++++++...+.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNT---EKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTT---TEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCC---CcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 56899999999999999999986543 4556666654332 33445788999999999999999999999876432
Q ss_pred -CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...|+||||+. |+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCC
Confidence 56899999985 699999954 346999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCCC------------------------ccCcccccccCChhhh-hcCCCCCcCCchHHHHHHHHHHcCCCCC
Q 011995 330 CAGHIPETD------------------------ISNSSVAAANLSVETL-ERGLLTPKSNVWSFGIVLLELLTGRKNL 382 (473)
Q Consensus 330 la~~~~~~~------------------------~~~~~~t~~y~aPE~~-~~~~~s~~sDvwSlGvvl~elltG~~p~ 382 (473)
+++...... ....++|++|+|||++ ....++.++|||||||++|||++|..||
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 998764321 2455789999999987 4556999999999999999999854443
No 210
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.5e-41 Score=343.80 Aligned_cols=265 Identities=16% Similarity=0.150 Sum_probs=201.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC------CCCCcccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL------QHPNLCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l------~HpnIv~l~g~~~~ 247 (473)
..+|+..+.||+|+||.||+|..... .+.+++|+.. ........+.+|+.++..+ .|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~---~~~vAvK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKV---HQHVALKMVR--NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTT---TEEEEEEEEC--SCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCC---CcEEEEEEEC--CccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 45799999999999999999986543 3445555543 3444556788899988887 57799999999987
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc--EEE
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--AKL 325 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--vkl 325 (473)
. ...++||||+. ++|.+++... ....+++..+..++.||+.||+|||+++ ||||||||+||||+.++. +||
T Consensus 171 ~--~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL 243 (429)
T 3kvw_A 171 R--NHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKV 243 (429)
T ss_dssp T--TEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEE
T ss_pred C--CeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEE
Confidence 6 78999999995 6999988654 2345999999999999999999999999 999999999999999887 999
Q ss_pred eccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc------
Q 011995 326 SGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP------ 399 (473)
Q Consensus 326 ~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~------ 399 (473)
+|||++..... ......+|+.|+|||++.+..++.++|||||||++|||++|.+||.+....+....+.....
T Consensus 244 ~DFG~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 244 IDFGSSCYEHQ-RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp CCCTTCEETTC-CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred eecccceecCC-cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 99999976543 33456789999999999999999999999999999999999999988766544332211000
Q ss_pred ---------cccccc-----ccccc-----------------cccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 400 ---------FLADDC-----RLSLI-----------------MDPQLKG----RFPLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 400 ---------~~~~~~-----~~~~~-----------------~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
+..... ....+ ..+.... .+....+..+.+||.+||+.||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 000000 00000 0000000 011123577899999999999999999
Q ss_pred HHHHHHH
Q 011995 445 MRSIFEE 451 (473)
Q Consensus 445 ~~eil~~ 451 (473)
+.|+|+.
T Consensus 403 a~e~L~H 409 (429)
T 3kvw_A 403 PGQALRH 409 (429)
T ss_dssp HHHHHTS
T ss_pred HHHHhCC
Confidence 9999973
No 211
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8e-42 Score=329.00 Aligned_cols=249 Identities=17% Similarity=0.280 Sum_probs=195.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|.+.+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+++.++||||+++++++... +
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLT---GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP--T 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--S
T ss_pred eccEEEEeeecCCCCeEEEEEEECCC---CceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC--C
Confidence 46799999999999999999986532 3445566554321 223456788999999999999999999999776 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~ 158 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS 158 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred eEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccc
Confidence 899999999999999999543 35899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||...........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 228 (276)
T 2h6d_A 159 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF---------- 228 (276)
T ss_dssp GCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC----------
T ss_pred cccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc----------
Confidence 8765433 234467899999999987765 6899999999999999999999987654443322221100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.++...+..+.+++.+||+.||.+|||+.++++.
T Consensus 229 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 --------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1133345788999999999999999999999974
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.7e-41 Score=338.36 Aligned_cols=266 Identities=14% Similarity=0.164 Sum_probs=194.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|...+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECC---CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence 4689999999999999999998544 34556666665432 3344567889999999999999999999987642
Q ss_pred -CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 250 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
....|+||||++ |+|.+.+.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 101 ~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 101 EFQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp TCCEEEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccceEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEe
Confidence 137899999996 478888842 4899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc-------
Q 011995 329 GCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF------- 400 (473)
Q Consensus 329 Gla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~------- 400 (473)
|++....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+.........+......
T Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 172 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp CC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred ecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9998764432 34457899999999999989999999999999999999999999887654433222110000
Q ss_pred ---------cccc-----cccccccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 ---------LADD-----CRLSLIMDPQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ---------~~~~-----~~~~~~~~~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.... ..+......... .......+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 000000000000 00112347789999999999999999999999874
No 213
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.3e-42 Score=346.30 Aligned_cols=266 Identities=15% Similarity=0.146 Sum_probs=194.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~--- 250 (473)
..+|...+.||+|+||+||+|....+.. +++++.... .....+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~----~aikk~~~~-----~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~ 109 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE----VAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE----EEEEEEECC-----TTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSS
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe----EEEEEEecC-----cchHHHHHHHHHhCCCCCcceEEEEEEecCCCCC
Confidence 3579999999999999999999755432 334433221 1223479999999999999999999865421
Q ss_pred -CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCCcEEEecc
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGY 328 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DF 328 (473)
..+++||||++++.+............+++..+..++.||+.||+|||+++ |+||||||+||||+ .++.+||+||
T Consensus 110 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp CEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCC
T ss_pred ceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 237899999977544333321123457999999999999999999999999 99999999999999 7899999999
Q ss_pred CCCcccCCC-CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-c-ccc---
Q 011995 329 GCAGHIPET-DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-R-PFL--- 401 (473)
Q Consensus 329 Gla~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~-~~~--- 401 (473)
|+++..... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+... . +..
T Consensus 187 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 187 GSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp TTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 999876433 33455789999999999765 4899999999999999999999999987655443322110 0 000
Q ss_pred ---cc---ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ---AD---DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ---~~---~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. ...+..+....+...++...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 000000000111111233466889999999999999999999999974
No 214
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.2e-42 Score=345.36 Aligned_cols=268 Identities=16% Similarity=0.227 Sum_probs=198.5
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC-
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG- 249 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~- 249 (473)
....++|...+.||+|+||+||+|.... +++.+++|+.... .....+|+++|+.++|||||++++++...+
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIE---SGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETT---TCCEEEEEEEECC-----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECC---CCCEEEEEEEecC-----cchHHHHHHHHHHcCCCCccchhheeeecCc
Confidence 4456789999999999999999998544 3455666655432 223447999999999999999999986532
Q ss_pred -----------------------------------CCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHH
Q 011995 250 -----------------------------------SDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQG 293 (473)
Q Consensus 250 -----------------------------------~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~ 293 (473)
...+++||||++ |+|.+.+... .....+++..+..++.||+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a 153 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153 (383)
T ss_dssp -----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 234889999997 5887776431 134579999999999999999
Q ss_pred HHHhhhcCCCceeecCCCCCceeeC-CCCcEEEeccCCCcccCCC-CccCcccccccCChhhhhcCC-CCCcCCchHHHH
Q 011995 294 LTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERGL-LTPKSNVWSFGI 370 (473)
Q Consensus 294 L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGv 370 (473)
|.|||+++ |+||||||+|||++ .++.+||+|||++...... ......+|+.|+|||.+.+.. ++.++|||||||
T Consensus 154 L~~LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 154 VGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99999999 99999999999997 6899999999999876433 334557789999999987754 899999999999
Q ss_pred HHHHHHcCCCCCCCCChHHHHhHhhhcc--cccc---------cccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 011995 371 VLLELLTGRKNLDSRHPKEERNLVKWSR--PFLA---------DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439 (473)
Q Consensus 371 vl~elltG~~p~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP 439 (473)
++|||++|+.||.+....+....+.... +... .......+........++...+.++.+|+.+||+.||
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999999876655433221100 0000 0000000011111111344567889999999999999
Q ss_pred CCCCCHHHHHH
Q 011995 440 SERPTMRSIFE 450 (473)
Q Consensus 440 ~~RPt~~eil~ 450 (473)
.+|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999985
No 215
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.5e-41 Score=340.38 Aligned_cols=266 Identities=18% Similarity=0.222 Sum_probs=200.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC--------CCCcccceeee
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--------HPNLCKLLGFH 245 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------HpnIv~l~g~~ 245 (473)
.++|.+.+.||+|+||+||+|+...+ .+.+++|+.. ......+.+.+|+.+++.++ |+||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQG---KKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEC--SCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCC---CeEEEEEEEe--cCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 46799999999999999999986543 3445555543 34455678899999999985 78899999988
Q ss_pred ecC--CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCC-
Q 011995 246 ARD--GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDF- 321 (473)
Q Consensus 246 ~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~- 321 (473)
... .....||||||+ +++|.+.+... ....+++..+..++.||+.||.|||++ + |+||||||+||||+.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccch
Confidence 732 236799999999 66776666543 235699999999999999999999998 8 99999999999999775
Q ss_pred ------------------------------------------------cEEEeccCCCcccCCCCccCcccccccCChhh
Q 011995 322 ------------------------------------------------SAKLSGYGCAGHIPETDISNSSVAAANLSVET 353 (473)
Q Consensus 322 ------------------------------------------------~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~ 353 (473)
.+||+|||++..... ......+|+.|+|||+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-~~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-HFTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-CSCSCCSCGGGCCHHH
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-cCccCCCCCcccCChh
Confidence 799999999987643 3445678999999999
Q ss_pred hhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH------HHhHh-hh--------------cccccccccccccccc
Q 011995 354 LERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE------ERNLV-KW--------------SRPFLADDCRLSLIMD 412 (473)
Q Consensus 354 ~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~------~~~~~-~~--------------~~~~~~~~~~~~~~~~ 412 (473)
+.+..++.++|||||||++|||++|+.||....... ....+ .. ...+.........+.+
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997654211 11111 10 0000111101111000
Q ss_pred cc---------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQ---------LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~---------l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. -...++...+..+.+||.+||+.||.+|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 011245678889999999999999999999999986
No 216
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.4e-41 Score=338.88 Aligned_cols=276 Identities=15% Similarity=0.153 Sum_probs=199.9
Q ss_pred CHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC----------hhhHhHHHHHHHHHhCCC
Q 011995 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----------QGVKEFINDVNTLASLQH 235 (473)
Q Consensus 166 ~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~Ei~~l~~l~H 235 (473)
...++....++|...+.||+|+||.||+|...+ +..+++|+....... ...+.+.+|+.++.+++|
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 88 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE----GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT----SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCC----CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC
Confidence 356788889999999999999999999998543 344555554332211 123778999999999999
Q ss_pred CCcccceeeeecC---CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 236 PNLCKLLGFHARD---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 236 pnIv~l~g~~~~~---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
|||+++++++... .....|+||||+. |+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||
T Consensus 89 ~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 162 (362)
T 3pg1_A 89 PNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHP 162 (362)
T ss_dssp TTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCG
T ss_pred cCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCCh
Confidence 9999999998653 2246899999997 688888864 3456999999999999999999999999 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCC-CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE 390 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~ 390 (473)
+|||++.++.+||+|||++...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+......
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp GGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred HHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999999999765433 2334577899999999977 6689999999999999999999999988765443
Q ss_pred HhHhhh-cc-ccccc-----ccccccccccc---cC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 391 RNLVKW-SR-PFLAD-----DCRLSLIMDPQ---LK----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 391 ~~~~~~-~~-~~~~~-----~~~~~~~~~~~---l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.. .. +...+ ........... .. .......+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 332211 00 00000 00000000000 00 00122345779999999999999999999999874
No 217
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.7e-41 Score=341.16 Aligned_cols=265 Identities=15% Similarity=0.193 Sum_probs=185.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+|+.++||||+++++++....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKT---GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTT---TEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCC---CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 47899999999999999999985443 3455555543322 2334577889999999999999999999986531
Q ss_pred -CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 250 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
....++|+||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp GCCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-
T ss_pred cCCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeec
Confidence 25689999999 7899998843 46999999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
|+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.......+........ ...+
T Consensus 177 G~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~-~~~~ 254 (367)
T 2fst_X 177 GLARHTAD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG-AELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC-HHHH
T ss_pred cccccccc-cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC-HHHH
Confidence 99987543 2345678999999999977 6789999999999999999999999988776554433321100000 0000
Q ss_pred ccc--------cc--ccc-CCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLI--------MD--PQL-KGR---FPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~--------~~--~~l-~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..+ .. +.. ... .....+..+.+|+.+||+.||.+|||+.++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 00 000 000 011345788999999999999999999999874
No 218
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.4e-41 Score=329.58 Aligned_cols=259 Identities=19% Similarity=0.224 Sum_probs=187.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHh-HHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ ++.+++|+............ +.++...++.++||||+++++++... +.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~--~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPS---GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--GD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCC---CeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc--CC
Confidence 46899999999999999999986443 35566666554433333333 44455568888999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 253 RMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
.++||||++ |+|.+++... .....+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGI 156 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC--
T ss_pred EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCC
Confidence 999999996 5887776431 1345799999999999999999999998 8 99999999999999999999999999
Q ss_pred CcccCCCCc-cCcccccccCChhhh----hcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPETDI-SNSSVAAANLSVETL----ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~~~-~~~~~t~~y~aPE~~----~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+........ ....+|+.|+|||.+ .+..++.++|||||||++|||++|+.||................
T Consensus 157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------- 229 (290)
T 3fme_A 157 SGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE------- 229 (290)
T ss_dssp -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS-------
T ss_pred cccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhcc-------
Confidence 987654432 334788999999996 45568899999999999999999999998643322111110000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhhh
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE--ELDRQE 456 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~--~L~~l~ 456 (473)
..........+.++.+|+.+||+.||.+|||+.|+++ .++...
T Consensus 230 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 230 --------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp --------CCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred --------CCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 0000012245678999999999999999999999998 444433
No 219
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.5e-41 Score=335.80 Aligned_cols=280 Identities=14% Similarity=0.142 Sum_probs=195.4
Q ss_pred HHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 168 ~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
.+.....++|...+.||+|+||.||+|....+ +..+++|+... .......+.+|+..+..++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~--~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKST---GMSVAIKKVIQ--DPRFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTT---CCEEEEEEEEC--CTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCC---CCEEEEEEEec--CccccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 45667789999999999999999999996543 34455554432 23334567788889999999999999999875
Q ss_pred CCC-----CceEEEEEeccCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCceeecCCCCCceeeCC
Q 011995 248 DGS-----DQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLH--EEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 248 ~~~-----~~~~lV~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~yLH--~~~~~~ivHrDlkp~NILl~~ 319 (473)
.+. ...++||||+++ +|.+.+.. ......+++..+..++.|++.||.||| +.+ |+||||||+|||++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeC
Confidence 321 237899999976 55444322 123456899999999999999999999 888 999999999999996
Q ss_pred -CCcEEEeccCCCcccCCCC-ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 320 -DFSAKLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 320 -~~~vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
++.+||+|||++....... .....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+..
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence 8999999999998775443 33457899999999996654 89999999999999999999999988766544333211
Q ss_pred ccccc---------ccccccccccc-----cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 011995 397 SRPFL---------ADDCRLSLIMD-----PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQE 456 (473)
Q Consensus 397 ~~~~~---------~~~~~~~~~~~-----~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~ 456 (473)
..... ........... ...........+.++.+|+.+||+.||.+|||+.|+++. |+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 10000 00000000000 000111223467889999999999999999999999974 44443
No 220
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-41 Score=337.13 Aligned_cols=266 Identities=15% Similarity=0.167 Sum_probs=203.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChh--------------hHhHHHHHHHHHhCCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQG--------------VKEFINDVNTLASLQHPN 237 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~~~~~~Ei~~l~~l~Hpn 237 (473)
.++|...+.||+|+||.||+|.. .++.+++|+..... .... ...+.+|+.++.+++|||
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 46899999999999999999986 23455565554321 1111 178999999999999999
Q ss_pred cccceeeeecCCCCceEEEEEeccCCChhhh------hhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCC
Q 011995 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRL------IYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEF 310 (473)
Q Consensus 238 Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDl 310 (473)
|+++++++.+. +..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ .+ |+||||
T Consensus 105 i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl 178 (348)
T 2pml_X 105 CLTCEGIITNY--DEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDV 178 (348)
T ss_dssp BCCCSEEEESS--SEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCC
T ss_pred cceEEEEEeeC--CeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCC
Confidence 99999999876 789999999999999998 5331 25679999999999999999999999 88 999999
Q ss_pred CCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcC-CCCC-cCCchHHHHHHHHHHcCCCCCCCCCh-
Q 011995 311 STANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERG-LLTP-KSNVWSFGIVLLELLTGRKNLDSRHP- 387 (473)
Q Consensus 311 kp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~-~~s~-~sDvwSlGvvl~elltG~~p~~~~~~- 387 (473)
||+|||++.++.+||+|||++............++..|+|||.+.+. .++. ++|||||||++|||++|..||.....
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 258 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred ChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999999999999999999987765555666789999999999877 5665 99999999999999999999987654
Q ss_pred HHHHhHhhhcccccccc-cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 388 KEERNLVKWSRPFLADD-CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......+.......... ..................++.++.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33222221111000000 0000000000000112345688999999999999999999999987
No 221
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.1e-41 Score=325.99 Aligned_cols=253 Identities=18% Similarity=0.264 Sum_probs=203.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--------ChhhHhHHHHHHHHHhCC-CCCccccee
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--------SQGVKEFINDVNTLASLQ-HPNLCKLLG 243 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Ei~~l~~l~-HpnIv~l~g 243 (473)
..++|...+.||+|+||.||+|....+ ++.+++|+...... ....+.+.+|+.++.++. ||||+++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPT---CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCc---CceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 457899999999999999999996543 35566776654421 122456889999999995 999999999
Q ss_pred eeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 244 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
++... ...++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+|+||||+|||++.++.+
T Consensus 92 ~~~~~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 92 TYETN--TFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp EEECS--SEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred eeccC--CeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcE
Confidence 99765 789999999999999999954 246899999999999999999999999 9999999999999999999
Q ss_pred EEeccCCCcccCCC-CccCcccccccCChhhhh------cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 324 KLSGYGCAGHIPET-DISNSSVAAANLSVETLE------RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 324 kl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~------~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
||+|||++...... ......+++.|+|||++. ...++.++|||||||++|||++|..||...........+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 243 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243 (298)
T ss_dssp EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc
Confidence 99999999876443 334457889999999985 34688999999999999999999999987655443322211
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
... .........++..+.+|+.+||+.||.+|||+.++++
T Consensus 244 ~~~--------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNY--------------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCC--------------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCc--------------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 100 0000112345678999999999999999999999986
No 222
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.5e-41 Score=332.39 Aligned_cols=252 Identities=15% Similarity=0.259 Sum_probs=193.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-------CChhhHhHHHHHHHHHhCCCCCcccceeee
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-------SSQGVKEFINDVNTLASLQHPNLCKLLGFH 245 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~ 245 (473)
..++|...+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+++++.++||||+++++++
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 84 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKT---CKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 84 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCC---CcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence 457899999999999999999986543 3455566554321 122345688999999999999999999998
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc---
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--- 322 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--- 322 (473)
... ..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 85 ~~~---~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~ 155 (322)
T 2ycf_A 85 DAE---DYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCL 155 (322)
T ss_dssp ESS---SEEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCC
T ss_pred cCC---ceEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCe
Confidence 653 48999999999999999843 456999999999999999999999999 999999999999987654
Q ss_pred EEEeccCCCcccCCCCc-cCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhc
Q 011995 323 AKLSGYGCAGHIPETDI-SNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWS 397 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~-~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~ 397 (473)
+||+|||++........ ....+|+.|+|||++. ...++.++|||||||++|||++|..||........ ...+...
T Consensus 156 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 235 (322)
T 2ycf_A 156 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235 (322)
T ss_dssp EEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT
T ss_pred EEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC
Confidence 99999999987654322 2346789999999974 45689999999999999999999999976433211 1111100
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. .. ..+. ....++..+.+|+.+||..||.+|||+.++++
T Consensus 236 ~--------~~--~~~~----~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 K--------YN--FIPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp C--------CC--CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c--------cc--cCch----hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 00 0000 01234578999999999999999999999985
No 223
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-41 Score=331.42 Aligned_cols=251 Identities=19% Similarity=0.263 Sum_probs=196.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|++.+.||+|+||.||+|....+ .+.+++|+.... .......+.+|+.++..++||||+++++++... +..
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 91 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKET---GALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYYHD--GKL 91 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTT---CCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CE
T ss_pred ccceeecceeccCCCeEEEEEEEcCC---CcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC--CeE
Confidence 46799999999999999999997543 234445544332 334467889999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 92 ~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp EEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 9999999999999988542 345999999999999999999999999 99999999999999999999999998754
Q ss_pred cCCC--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 334 IPET--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
.... ......+++.|+|||.+. +..++.++|||||||++|||++|..||...........+.....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 239 (302)
T 2j7t_A 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP------- 239 (302)
T ss_dssp HHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-------
T ss_pred ccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC-------
Confidence 3211 123446789999999984 56689999999999999999999999987665443221111000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+. ...+..++..+.+++.+||..||.+|||+.++++
T Consensus 240 ------~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 ------PT--LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ------CC--CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ------cc--cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 0113345678999999999999999999999986
No 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=341.27 Aligned_cols=270 Identities=16% Similarity=0.193 Sum_probs=182.6
Q ss_pred hccccc-CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFS-DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+.|+. +++||+|+||+||+|.+.+.. ..+.+++|+... ......+.+|+.+|+.++|||||++++++.......
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~-~~~~vaiK~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGK-DDKDYALKQIEG---TGISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSS-CCCCEEEEECSS---SSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCC-CCeEEEEEEECC---CCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 345665 468999999999999976432 234455554432 223457889999999999999999999997655578
Q ss_pred eEEEEEeccCCChhhhhhcC------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----CCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGR------SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI----DKDFS 322 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~ 322 (473)
.+|||||+. |+|.+++... .....+++..+..|+.||+.||.|||+++ |+||||||+|||| +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCc
Confidence 999999996 5888777421 12235999999999999999999999999 9999999999999 67799
Q ss_pred EEEeccCCCcccCCC-----CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChH--------
Q 011995 323 AKLSGYGCAGHIPET-----DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPK-------- 388 (473)
Q Consensus 323 vkl~DFGla~~~~~~-----~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~-------- 388 (473)
+||+|||+++..... ......+|+.|+|||++.+. .++.++|||||||++|||++|++||......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 999999999876432 22445789999999999874 4899999999999999999999999765432
Q ss_pred -HHHh-Hhhhc-cccccccccccc----------ccccccCC--------CCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 389 -EERN-LVKWS-RPFLADDCRLSL----------IMDPQLKG--------RFPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 389 -~~~~-~~~~~-~~~~~~~~~~~~----------~~~~~l~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
.... +.... .+....-..+.. ........ ......+..+.+||.+||+.||.+|||+.|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 1111 11000 000000000000 00000000 000112567889999999999999999999
Q ss_pred HHHH
Q 011995 448 IFEE 451 (473)
Q Consensus 448 il~~ 451 (473)
+|+.
T Consensus 331 ~L~h 334 (405)
T 3rgf_A 331 AMQD 334 (405)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9974
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.5e-42 Score=345.09 Aligned_cols=257 Identities=15% Similarity=0.106 Sum_probs=182.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--ChhhHhHHHHHHHHHhC--CCCCcccce-------e
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL--QHPNLCKLL-------G 243 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ei~~l~~l--~HpnIv~l~-------g 243 (473)
.+|...+.||+|+||.||+|....+ .+.+++|+...... ......+.+|+.++..+ +||||++++ +
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVER---LEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSD 138 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCC---CceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeeh
Confidence 4688889999999999999996543 45666777665432 23456677885444444 699988754 4
Q ss_pred eeecCCC---------------CceEEEEEeccCCChhhhhhcCCCCCCCCHHHH------HHHHHHHHHHHHHhhhcCC
Q 011995 244 FHARDGS---------------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTR------VKIALCAAQGLTFLHEEGP 302 (473)
Q Consensus 244 ~~~~~~~---------------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~yLH~~~~ 302 (473)
++...+. ..+||||||++ |+|.+++... +..+.+..+ ..++.||+.||+|||+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~- 214 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKG- 214 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-
Confidence 4433321 34899999998 8999999653 223455566 788899999999999999
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCC
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRK 380 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~ 380 (473)
||||||||+||||+.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 --LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp --EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred --CccCcCCHHHEEECCCCCEEEEecceeeecCCCc-cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998764322 24556799999999987 679999999999999999999999
Q ss_pred CCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 381 NLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 381 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
||......... .|... .................++..+.+|+.+||+.||++|||+.++++
T Consensus 292 Pf~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG---SWKRP------SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT---CCCBC------CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc---chhhh------hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99876432211 01100 000001111111112356788999999999999999999999975
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-41 Score=337.60 Aligned_cols=267 Identities=17% Similarity=0.209 Sum_probs=200.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---C
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---S 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~---~ 250 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+............+.+|+.+++.++||||+++++++.... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPT---GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCC---CcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 46899999999999999999986543 34555665543334445677889999999999999999999876531 3
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||||+. |+|.+++.. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999996 699998854 35899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC------------ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 331 AGHIPETD------------ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 331 a~~~~~~~------------~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
+....... .....+|+.|+|||++.+ ..++.++|||||||++|||++|..||.+.........+...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 98664221 123467899999998865 67899999999999999999999999887654433322110
Q ss_pred ccccccccccccccc----------cccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 398 RPFLADDCRLSLIMD----------PQLK----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~----------~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
............+.. +... ......++.++.+|+.+||+.||.+|||+.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000000 0000 00112456788999999999999999999999873
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.2e-40 Score=327.68 Aligned_cols=266 Identities=16% Similarity=0.189 Sum_probs=203.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC------cccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN------LCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn------Iv~l~g~~~~ 247 (473)
.++|++.+.||+|+||.||+|.... ...+.+++|+.. ........+.+|+.++..++|++ ++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~vavK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHK--AGGRHVAVKIVK--NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEEC--SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecC--CCCcEEEEEEEe--cCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 4689999999999999999998632 123444555443 33445677889999999987654 9999999887
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC--------
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-------- 319 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-------- 319 (473)
. +..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.
T Consensus 89 ~--~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 89 H--GHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp T--TEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC
T ss_pred C--CcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccC
Confidence 6 7899999999 88999999654 2346899999999999999999999999 999999999999987
Q ss_pred -----------CCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChH
Q 011995 320 -----------DFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388 (473)
Q Consensus 320 -----------~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~ 388 (473)
++.+||+|||++..... ......+|+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDE-HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTS-CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred CccccccccccCCCceEeeCcccccCcc-ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 66899999999976543 334557899999999999989999999999999999999999999887665
Q ss_pred HHHhHhhhcccccccc----cc---------------------ccccccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 011995 389 EERNLVKWSRPFLADD----CR---------------------LSLIMDP-QLKGRFPLKAARTVADIALRCLQKEPSER 442 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~----~~---------------------~~~~~~~-~l~~~~~~~~~~~l~~li~~cl~~dP~~R 442 (473)
+....+.......... .. ......+ ..........+.++.+|+.+||+.||.+|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 5433322111000000 00 0000000 00011234567889999999999999999
Q ss_pred CCHHHHHHH
Q 011995 443 PTMRSIFEE 451 (473)
Q Consensus 443 Pt~~eil~~ 451 (473)
||+.|+++.
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999864
No 228
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.1e-40 Score=326.85 Aligned_cols=273 Identities=18% Similarity=0.239 Sum_probs=203.5
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhC---CCCCcccceeeeec
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL---QHPNLCKLLGFHAR 247 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~ 247 (473)
...++|...+.||+|+||.||+|..... .++.+++|+..... .......+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 85 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCC--CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence 3467899999999999999999986421 22344555544322 222345677888887776 89999999999862
Q ss_pred ---CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 248 ---DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 248 ---~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
......++||||+. |+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 86 SRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp EECSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEE
Confidence 12367899999997 69999986542 345899999999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc-
Q 011995 325 LSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA- 402 (473)
Q Consensus 325 l~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~- 402 (473)
|+|||++...... ......++..|+|||++.+..++.++|||||||++|||++|+.||.+.........+........
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 161 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred EecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 9999999876433 23445778999999999999999999999999999999999999988765544332211000000
Q ss_pred ccc----cc-ccc---cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 DDC----RL-SLI---MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ~~~----~~-~~~---~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... .. ... ........+...++..+.+|+.+||..||.+|||+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00 000 00000112234566889999999999999999999999953
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.9e-41 Score=326.06 Aligned_cols=253 Identities=17% Similarity=0.293 Sum_probs=192.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC----
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD---- 248 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~---- 248 (473)
..++|+..+.||+|+||.||+|....+ .+.+++|+... .......+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALD---SRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTT---CCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCC---CeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 457899999999999999999986543 33444554432 334567889999999999999999999987652
Q ss_pred -------CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 249 -------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 249 -------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
.....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCC
Confidence 135789999999999999999643 346788999999999999999999999 99999999999999999
Q ss_pred cEEEeccCCCcccCCC----------------CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCC
Q 011995 322 SAKLSGYGCAGHIPET----------------DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDS 384 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~----------------~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~ 384 (473)
.+||+|||++...... ......+++.|+|||++.+. .++.++|||||||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 9999999999765421 12344678999999999764 68999999999999999998 5543
Q ss_pred CChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 385 RHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... .......... ....+...++...+..+.+++.+||+.||.+|||+.++++.
T Consensus 231 ~~~--~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 231 GME--RVNILKKLRS-----------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHH--HHHHHHHHHS-----------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chh--HHHHHHhccc-----------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 211 1111110000 01112223345566788999999999999999999999873
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-40 Score=333.19 Aligned_cols=265 Identities=15% Similarity=0.193 Sum_probs=197.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC-
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD- 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~- 251 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRS---GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred cccEEEEeEEecCCCeEEEEEEECCC---CCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence 46899999999999999999986543 4556666655432 333457789999999999999999999998765311
Q ss_pred ---ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 252 ---QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 252 ---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
..++||||+. ++|.+++. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECST
T ss_pred cceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEec
Confidence 2499999996 68888872 24899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc---
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD--- 404 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 404 (473)
|++..... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+..........
T Consensus 189 g~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 189 GLARHADA-EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp TCC---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred Cccccccc-CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 99986543 3345578999999999987 678999999999999999999999998876554433221100000000
Q ss_pred ----ccccc---ccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 ----CRLSL---IMDPQLKG---RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ----~~~~~---~~~~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..... ........ .+....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000 00000000 0112346889999999999999999999999875
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=329.23 Aligned_cols=266 Identities=18% Similarity=0.284 Sum_probs=194.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC-----
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD----- 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~----- 248 (473)
.++|...+.||+|+||.||+|..... .+.+++|+.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDC---DKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTT---TEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCC---CeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 46789999999999999999996543 345556655433 344567889999999999999999999987432
Q ss_pred -------CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CC
Q 011995 249 -------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KD 320 (473)
Q Consensus 249 -------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~ 320 (473)
.....++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++ .+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCC
Confidence 2267899999997 699999842 46899999999999999999999999 99999999999997 56
Q ss_pred CcEEEeccCCCcccCCC-----CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh
Q 011995 321 FSAKLSGYGCAGHIPET-----DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~-----~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~ 394 (473)
+.+||+|||++...... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 79999999999876422 2233456889999999866 67899999999999999999999999887765443333
Q ss_pred hhcccccccccccc------c-----cccccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 395 KWSRPFLADDCRLS------L-----IMDPQL-KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 395 ~~~~~~~~~~~~~~------~-----~~~~~l-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+......... . ...+.. ...+...++.++.+|+.+||+.||.+|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 22111111000000 0 000000 000112356889999999999999999999999873
No 232
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=331.53 Aligned_cols=246 Identities=19% Similarity=0.279 Sum_probs=192.3
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----hhhHhHHHHHHHHHhC----CCCCcccc
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----QGVKEFINDVNTLASL----QHPNLCKL 241 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Ei~~l~~l----~HpnIv~l 241 (473)
....++|...+.||+|+||.||+|.... ..+.+++|+....... .....+.+|+.++.++ +|+||+++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~ 103 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLT---DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL 103 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTT---TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEcc---CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence 3456789999999999999999998543 3345556655433211 2334577899999999 89999999
Q ss_pred eeeeecCCCCceEEEEEe-ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-C
Q 011995 242 LGFHARDGSDQRMLIYER-LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-K 319 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~ 319 (473)
++++... +..++|||| +.+++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ .
T Consensus 104 ~~~~~~~--~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 175 (312)
T 2iwi_A 104 LDWFETQ--EGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLR 175 (312)
T ss_dssp EEEC-------CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETT
T ss_pred EEEEecC--CeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCC
Confidence 9998765 788999999 7899999999643 35899999999999999999999999 99999999999999 8
Q ss_pred CCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCC-CcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 320 DFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLT-PKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s-~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
++.+||+|||++............++..|+|||++.+..+. .++|||||||++|||++|+.||..... ....
T Consensus 176 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~-- 248 (312)
T 2iwi_A 176 RGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----ILEA-- 248 (312)
T ss_dssp TTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHHT--
T ss_pred CCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----Hhhh--
Confidence 89999999999988766666667889999999999877764 589999999999999999999975311 0100
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...++..++..+.+|+.+||+.||++|||+.++++.
T Consensus 249 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 -----------------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----------------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001233456788999999999999999999999973
No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.5e-40 Score=320.85 Aligned_cols=253 Identities=18% Similarity=0.254 Sum_probs=201.8
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|.+.+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++++++||||+++++++...
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~---~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRIT---QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-- 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCC---CcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC--
Confidence 3457899999999999999999986533 3455566654432 334567899999999999999999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEEEec
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSG 327 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vkl~D 327 (473)
...++||||+++++|.+++... ..+++..+..++.||+.||.|||+++ |+|+||||+|||++.+ +.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred CeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEec
Confidence 7899999999999999988543 35899999999999999999999999 9999999999999754 4799999
Q ss_pred cCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 328 YGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 328 FGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
||++....... .....+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..... .
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~ 240 (287)
T 2wei_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY------A 240 (287)
T ss_dssp TTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------C
T ss_pred cCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------C
Confidence 99998664432 234467899999999865 489999999999999999999999987665443322211100 0
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. + . .....++.++.+++.+||..||.+|||+.++++
T Consensus 241 ~----~--~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 F----D--L--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp C----C--S--GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C----C--c--hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0 0 0 001234578999999999999999999999997
No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-40 Score=329.13 Aligned_cols=257 Identities=19% Similarity=0.277 Sum_probs=178.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHH-HHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+...........++..|+. +++.++||||+++++++... +.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~--~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPS---GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE--GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTT---TEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS--SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCC---CCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC--Cc
Confidence 36788889999999999999996543 35566666655444445566677776 67778999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
.++||||+.+ +|.+++.. ......+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCC
Confidence 9999999975 88777642 11245689999999999999999999998 8 9999999999999999999999999
Q ss_pred CCcccCCCCc-cCcccccccCChhhh----hcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 330 CAGHIPETDI-SNSSVAAANLSVETL----ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 330 la~~~~~~~~-~~~~~t~~y~aPE~~----~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
++........ ....+++.|+|||++ .+..++.++|||||||++|||++|+.||......... .. ...
T Consensus 172 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~---~~~--- 243 (327)
T 3aln_A 172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ--LT---QVV--- 243 (327)
T ss_dssp SSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------C---CCC---
T ss_pred CceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH--HH---HHh---
Confidence 9987644322 334788999999998 4566899999999999999999999999764321110 00 000
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+.+.......++..+.+|+.+||..||.+|||+.+|++.
T Consensus 244 ----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 ----KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ----CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0001111111223456789999999999999999999999873
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=328.89 Aligned_cols=264 Identities=16% Similarity=0.205 Sum_probs=197.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-- 250 (473)
.++|...+.||+|+||.||+|....+ ++.+++|+..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRS---GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCC---CCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence 46799999999999999999986543 3555666554432 23345678999999999999999999999876521
Q ss_pred --CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 251 --DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 251 --~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
...++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECST
T ss_pred cceeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeec
Confidence 23599999996 68888772 24899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc------
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL------ 401 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------ 401 (473)
|++...... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+.......
T Consensus 171 g~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 171 GLARHADAE-MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TCTTC---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccccCCCCC-ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 999865432 344578999999999977 678999999999999999999999998876544332221100000
Q ss_pred --cccc------ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 --ADDC------RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 --~~~~------~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.. .+.......+ .......+.++.+|+.+||..||.+|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 0000000001 11223567889999999999999999999999864
No 236
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8e-41 Score=332.16 Aligned_cols=256 Identities=15% Similarity=0.191 Sum_probs=172.4
Q ss_pred HhcccccC-cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHH-HHHHhCCCCCcccceeeeecC--
Q 011995 173 ACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDV-NTLASLQHPNLCKLLGFHARD-- 248 (473)
Q Consensus 173 ~~~~f~~~-~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei-~~l~~l~HpnIv~l~g~~~~~-- 248 (473)
..++|.+. +.||+|+||.||+|....+ .+.+++|+... . ....+|+ ..+..+.||||+++++++...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~--~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRT---GQKCALKLLYD--S----PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEES--S----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCC---CCEEEEEEecC--c----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 36788885 4699999999999996543 34555665542 1 2223333 345667999999999998752
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKL 325 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl 325 (473)
+....++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl 172 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKL 172 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEE
T ss_pred CCceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEE
Confidence 225589999999999999999754 2356999999999999999999999999 999999999999976 456999
Q ss_pred eccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 326 SGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 326 ~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+|||++............+|+.|+|||++.+..++.++|||||||++|||++|..||.............. .+
T Consensus 173 ~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~---- 245 (336)
T 3fhr_A 173 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR---RI---- 245 (336)
T ss_dssp CCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred eccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH---hh----
Confidence 99999987765555666789999999999888899999999999999999999999976543221100000 00
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..............++.++.+|+.+||+.||.+|||+.++++.
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 246 ---RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000011111123456889999999999999999999999983
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.8e-40 Score=332.31 Aligned_cols=265 Identities=17% Similarity=0.163 Sum_probs=200.0
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CC-----Ccccceeeee
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HP-----NLCKLLGFHA 246 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-Hp-----nIv~l~g~~~ 246 (473)
..++|...+.||+|+||+||+|....+ .+.+++|+.. .......++.+|+.++..++ |+ +|+.+++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVE---QEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTT---TEEEEEEEEC--SSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCC---CcEEEEEEEe--ccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 467899999999999999999986543 3445555543 33445577888999998885 55 4899999988
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh--cCCCceeecCCCCCceeeC--CCCc
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE--EGPFQAMYNEFSTANIQID--KDFS 322 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~--~~~~~ivHrDlkp~NILl~--~~~~ 322 (473)
.. +..+|||||+. |+|.+++.... ...+++..+..++.|++.||.|||. .+ ||||||||+||||+ .++.
T Consensus 127 ~~--~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 127 FR--NHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ET--TEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCC
T ss_pred cC--CceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCc
Confidence 76 78999999995 59999996542 3458999999999999999999994 56 99999999999995 5788
Q ss_pred EEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 323 AKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+||+|||++..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+........
T Consensus 200 ~kL~DFG~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQ-RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278 (382)
T ss_dssp EEECCCTTCEETTC-CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEEEeccCceeccc-ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999999987643 33456789999999999999999999999999999999999999998766554333221100000
Q ss_pred c-----ccc----cccccc-----------------cc--------------------cCCCCCHHHHHHHHHHHHHhcc
Q 011995 403 D-----DCR----LSLIMD-----------------PQ--------------------LKGRFPLKAARTVADIALRCLQ 436 (473)
Q Consensus 403 ~-----~~~----~~~~~~-----------------~~--------------------l~~~~~~~~~~~l~~li~~cl~ 436 (473)
. ... +..+.+ +. -..........++.+||.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 0 000 000000 00 0001123345689999999999
Q ss_pred cCCCCCCCHHHHHH
Q 011995 437 KEPSERPTMRSIFE 450 (473)
Q Consensus 437 ~dP~~RPt~~eil~ 450 (473)
.||++|||+.|+|+
T Consensus 359 ~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 359 YDPKTRIQPYYALQ 372 (382)
T ss_dssp SCTTTSCCHHHHTT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999986
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.9e-40 Score=326.95 Aligned_cols=271 Identities=13% Similarity=0.136 Sum_probs=202.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC------cccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN------LCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn------Iv~l~g~~~~ 247 (473)
.++|.+.+.||+|+||.||+|...... ...+++|+. .........+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~vavK~~--~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARG--KSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTT--TEEEEEEEE--CSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCC--ceEEEEEEE--cccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 468999999999999999999865432 134445544 333445677889999999997766 8888888877
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----------
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---------- 317 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl---------- 317 (473)
. +..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+|||+
T Consensus 94 ~--~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 94 H--GHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp T--TEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEEC
T ss_pred C--CeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccc
Confidence 6 7899999999 66777777543 2346999999999999999999999999 9999999999999
Q ss_pred ---------CCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChH
Q 011995 318 ---------DKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388 (473)
Q Consensus 318 ---------~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~ 388 (473)
+.++.+||+|||++..... ......+|+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHE-HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTS-CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccccCCCcEEEeecCccccccc-cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 5678999999999976533 334567899999999999999999999999999999999999999887655
Q ss_pred HHHhHhhhcccccccc-----cccccc--------------------ccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 011995 389 EERNLVKWSRPFLADD-----CRLSLI--------------------MDP-QLKGRFPLKAARTVADIALRCLQKEPSER 442 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~-----~~~~~~--------------------~~~-~l~~~~~~~~~~~l~~li~~cl~~dP~~R 442 (473)
.....+.......... ...... ..+ ..........+.++.+|+.+||+.||.+|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 4333222111000000 000000 000 00001123456789999999999999999
Q ss_pred CCHHHHHHH--HHhhh
Q 011995 443 PTMRSIFEE--LDRQE 456 (473)
Q Consensus 443 Pt~~eil~~--L~~l~ 456 (473)
||+.|+++. +..+.
T Consensus 326 pt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 326 ITLAEALLHPFFAGLT 341 (355)
T ss_dssp CCHHHHTTSGGGGGCC
T ss_pred cCHHHHhcChhhcCCC
Confidence 999999853 44444
No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.4e-40 Score=330.64 Aligned_cols=267 Identities=18% Similarity=0.229 Sum_probs=198.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-----------CCCcccce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----------HPNLCKLL 242 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------HpnIv~l~ 242 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+.. ........+.+|+.++.+++ |+||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVN---NTHVAMKIVR--GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTT---TEEEEEEEEC--SCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCC---CcEEEEEEec--CCccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 35799999999999999999986443 3445555543 33445677889999999886 89999999
Q ss_pred eeeecCC--CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeC-
Q 011995 243 GFHARDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQID- 318 (473)
Q Consensus 243 g~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~- 318 (473)
+++...+ ....++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEec
Confidence 9987642 23789999999 889999996542 34599999999999999999999998 8 99999999999994
Q ss_pred -----CCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH----
Q 011995 319 -----KDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE---- 389 (473)
Q Consensus 319 -----~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~---- 389 (473)
..+.+||+|||++..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDE-HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTB-CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred cCCCcCcceEEEcccccccccCC-CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 445899999999976643 3345578999999999999999999999999999999999999997654211
Q ss_pred --H-HhHhhhcc--------------ccccccccccccccc---------ccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 011995 390 --E-RNLVKWSR--------------PFLADDCRLSLIMDP---------QLKGRFPLKAARTVADIALRCLQKEPSERP 443 (473)
Q Consensus 390 --~-~~~~~~~~--------------~~~~~~~~~~~~~~~---------~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 443 (473)
. ..++.... .+.........+... .-...++...+.++.+||.+||+.||.+||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 1 11111000 000000000000000 001134678889999999999999999999
Q ss_pred CHHHHHHH
Q 011995 444 TMRSIFEE 451 (473)
Q Consensus 444 t~~eil~~ 451 (473)
|+.|+++.
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999873
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.9e-41 Score=332.96 Aligned_cols=248 Identities=18% Similarity=0.228 Sum_probs=200.3
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----hhhHhHHHHHHHHHhCC--CCCcccc
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----QGVKEFINDVNTLASLQ--HPNLCKL 241 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Ei~~l~~l~--HpnIv~l 241 (473)
+.....++|...+.||+|+||.||+|....+ .+.+++|+....... .....+.+|+.++.+++ |+||+++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~ 113 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 113 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTT---TEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCC---CcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence 3344567899999999999999999986543 355566665543211 13356788999999996 5999999
Q ss_pred eeeeecCCCCceEEEEEeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-C
Q 011995 242 LGFHARDGSDQRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-K 319 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~ 319 (473)
++++... +..++||||+.+ ++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ .
T Consensus 114 ~~~~~~~--~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 114 LDWFERP--DSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLN 185 (320)
T ss_dssp EEEEECS--SEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETT
T ss_pred EEEEecC--CcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCC
Confidence 9999876 789999999976 899999854 346899999999999999999999999 99999999999999 7
Q ss_pred CCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 320 DFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
++.+||+|||++............+|+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .... .
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~-~ 259 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----IIRG-Q 259 (320)
T ss_dssp TTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHHC-C
T ss_pred CCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----hhcc-c
Confidence 8999999999998876666666788999999999987775 6889999999999999999999965311 1100 0
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .++..++.++.+|+.+||+.||.+|||+.+|++.
T Consensus 260 ~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 V------------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0122345789999999999999999999999873
No 241
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.5e-40 Score=324.84 Aligned_cols=259 Identities=18% Similarity=0.293 Sum_probs=197.7
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCC--CCCcccc
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQ--HPNLCKL 241 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~--HpnIv~l 241 (473)
+.++.+....++|...+.||+|+||.||++...+ ...+++|+..... .......+.+|+.++.+++ |+||+++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~ 93 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTT----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC----CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence 3334444456789999999999999999998543 3455666665543 3445678899999999997 5999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
++++... ...++||| +.+++|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++. +
T Consensus 94 ~~~~~~~--~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~ 163 (313)
T 3cek_A 94 YDYEITD--QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-G 163 (313)
T ss_dssp EEEEECS--SEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-T
T ss_pred EEEeecC--CEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-C
Confidence 9999876 78999999 5688999999643 46899999999999999999999999 999999999999964 8
Q ss_pred cEEEeccCCCcccCCCC----ccCcccccccCChhhhhc-----------CCCCCcCCchHHHHHHHHHHcCCCCCCCCC
Q 011995 322 SAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLER-----------GLLTPKSNVWSFGIVLLELLTGRKNLDSRH 386 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~-----------~~~s~~sDvwSlGvvl~elltG~~p~~~~~ 386 (473)
.+||+|||++....... .....+++.|+|||.+.+ ..++.++|||||||++|||++|..||....
T Consensus 164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 99999999998764332 123467899999999875 468889999999999999999999997654
Q ss_pred hHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 387 PKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...... . .+.++.....++...+.++.+|+.+||..||.+||++.++++.-
T Consensus 244 ~~~~~~-~--------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 244 NQISKL-H--------------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp SHHHHH-H--------------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHH-H--------------HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 322110 0 01111111222333457899999999999999999999999753
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.9e-40 Score=348.39 Aligned_cols=275 Identities=17% Similarity=0.189 Sum_probs=206.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeec----CC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR----DG 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~ 249 (473)
.++|++.+.||+|+||.||+|.... .+..+++|+............+.+|++++.+++||||+++++++.. ..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~---tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTT---TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 3689999999999999999998543 3344555554443445556789999999999999999999998754 12
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc---EEEe
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS---AKLS 326 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---vkl~ 326 (473)
.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEc
Confidence 3678999999999999999976554557999999999999999999999999 999999999999987654 9999
Q ss_pred ccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 327 GYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 327 DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
|||++....... .....+++.|+|||.+.+..++.++|||||||++|||++|..||....... .|.........
T Consensus 167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-----~~~~~i~~~~~ 241 (676)
T 3qa8_A 167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-----QWHGKVREKSN 241 (676)
T ss_dssp SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-----HSSTTCC----
T ss_pred ccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-----hhhhhhhcccc
Confidence 999998765443 344578999999999999999999999999999999999999997653322 11111100000
Q ss_pred -----------ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH-----HHHHHHhhhccc
Q 011995 406 -----------RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRS-----IFEELDRQESRK 459 (473)
Q Consensus 406 -----------~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e-----il~~L~~l~~~~ 459 (473)
.............+....+..+.+|+.+||..||.+|||+.+ +.+.++.+.+..
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000011122345568899999999999999999999988 667777766544
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=319.58 Aligned_cols=251 Identities=19% Similarity=0.291 Sum_probs=177.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHh-HHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|....+ .+.+++|+...........+ +.++..++..++||||+++++++... +.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKT---GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN--TD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTT---CCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SE
T ss_pred hccccccceeeecCCeeEEEEEEecC---CeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC--Cc
Confidence 56889999999999999999997543 34556666654433333333 44455678888999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.++||||+ ++.+..++.. ....+++..+..++.|++.||.|||++ + |+|+||||+|||++.++.+||+|||++
T Consensus 99 ~~lv~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~ 172 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGIS 172 (318)
T ss_dssp EEEEECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999 5555555432 234689999999999999999999995 8 999999999999999999999999999
Q ss_pred cccCCCC-ccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhcccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWSRPFLADD 404 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~ 404 (473)
....... .....+++.|+|||++. ...++.++|||||||++|||++|+.||........ ...+....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------ 246 (318)
T 2dyl_A 173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE------ 246 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC------
T ss_pred hhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC------
Confidence 7664332 23457889999999994 45688999999999999999999999986433221 11111000
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+.+. ....++.++.+|+.+||+.||.+|||+.+|++
T Consensus 247 -------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 247 -------PPLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -------CCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -------CCCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00000 01234578999999999999999999999987
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.1e-39 Score=331.81 Aligned_cols=248 Identities=16% Similarity=0.226 Sum_probs=182.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.|...+.||+|+||+||.+...+ ++.+++|+... ...+.+.+|+.+|.++ +|||||++++++.+. ...+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~----g~~vAvK~~~~----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--~~~~ 85 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQ----GRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRYYCSETTD--RFLY 85 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESS----SSEEEEEEEEG----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECS--SEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEEC----CeEEEEEEEcH----HHHHHHHHHHHHHHhccCCCCcCeEEEEEecC--CeEE
Confidence 45566889999999997654332 34555655442 2345678999999986 899999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCC----CCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC----------
Q 011995 255 LIYERLFHGSLDRLIYGRSDGP----PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---------- 320 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---------- 320 (473)
|||||+. |+|.+++....... ...+..+..++.||+.||+|||+++ |+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccC
Confidence 9999995 69999996542211 1133356789999999999999999 9999999999999654
Q ss_pred ---CcEEEeccCCCcccCCCC------ccCcccccccCChhhhhc-------CCCCCcCCchHHHHHHHHHHc-CCCCCC
Q 011995 321 ---FSAKLSGYGCAGHIPETD------ISNSSVAAANLSVETLER-------GLLTPKSNVWSFGIVLLELLT-GRKNLD 383 (473)
Q Consensus 321 ---~~vkl~DFGla~~~~~~~------~~~~~~t~~y~aPE~~~~-------~~~s~~sDvwSlGvvl~ellt-G~~p~~ 383 (473)
+.+||+|||++....... .....+|+.|+|||++.+ ..++.++|||||||++|||++ |..||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 489999999998765432 224478999999999976 568999999999999999999 999997
Q ss_pred CCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....... .+..... .. +.........++.++.+||.+||+.||.+|||+.+|++
T Consensus 242 ~~~~~~~-~i~~~~~-------~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 242 DKYSRES-NIIRGIF-------SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp STTTHHH-HHHHTCC-------CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhHH-HHhcCCC-------Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 6543332 1111110 00 01111124567889999999999999999999999986
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=328.19 Aligned_cols=246 Identities=14% Similarity=0.198 Sum_probs=181.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
..+|...+.||+|+||+||.....+ .+.+++|+.. . .....+.+|+.+|+.+ +|||||++++++.+. ..
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~----~~~vAvK~~~--~--~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~--~~ 92 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFD----NRDVAVKRIL--P--ECFSFADREVQLLRESDEHPNVIRYFCTEKDR--QF 92 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESS----SSEEEEEEEC--T--TTEEECHHHHHHHHHSCCCTTBCCEEEEEEET--TE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeC----CeEEEEEEEC--H--HHHHHHHHHHHHHHhccCCCCcCeEEEEEecC--CE
Confidence 4578889999999999955433222 2334454442 2 2234577899999999 899999999998766 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-----CCcEEEec
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-----DFSAKLSG 327 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-----~~~vkl~D 327 (473)
.||||||+. |+|.+++.... ..+.+..+..++.||+.||.|||+++ |+||||||+||||+. ...+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 999999995 69999996532 33455567799999999999999999 999999999999953 34688999
Q ss_pred cCCCcccCCC-----CccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcc
Q 011995 328 YGCAGHIPET-----DISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 328 FGla~~~~~~-----~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 398 (473)
||++...... ......+|+.|+|||++. ...++.++|||||||++|||++ |..||...............
T Consensus 167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~- 245 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC- 245 (432)
T ss_dssp TTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCC-
T ss_pred ccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccC-
Confidence 9999876432 223457899999999997 4567889999999999999999 99999765433322111100
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
... .. ......+..+.+||.+||+.||.+|||+.+|++
T Consensus 246 -------~~~-----~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 -------SLD-----CL--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------CCT-----TS--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------Ccc-----cc--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000 00 112355677899999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.6e-39 Score=310.76 Aligned_cols=235 Identities=12% Similarity=0.103 Sum_probs=181.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||+|..... .+.+++|+...... ....+.+.+|+.++..++||||+++++++... +.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTAL---DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR--AG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTT---TEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCC---CceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC--Cc
Confidence 5799999999999999999996543 35556666554322 33457899999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+++++|.+++.. + .....+..|+.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~---~--~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--- 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADT---S--PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--- 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTT---C--CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC---
T ss_pred EEEEEEecCCCCHHHHHhc---C--CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc---
Confidence 9999999999999999932 1 355678899999999999999999 9999999999999999999998554
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
|++ .++.++|||||||++|||++|+.||.+........ .........
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---~~~~~~~~~-------- 221 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA---PAERDTAGQ-------- 221 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE---ECCBCTTSC--------
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH---HHHHHhccC--------
Confidence 333 36889999999999999999999998754322110 000000000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
......+...++.++.+|+.+||+.||.+| |+.|+++.|+++....
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 000001123456789999999999999999 9999999999877543
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-39 Score=347.27 Aligned_cols=244 Identities=17% Similarity=0.220 Sum_probs=191.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD-- 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~-- 251 (473)
.++|.+.+.||+|+||.||+|..... ..+.+++|+............+.+|+.++.+++|||||++++++...+..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 37899999999999999999986431 23444555443333445567789999999999999999999999875321
Q ss_pred -ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 252 -QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 252 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..||||||+++++|.+++.. .+++..+..|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEeccc
Confidence 16999999999999987732 6999999999999999999999999 9999999999999986 899999999
Q ss_pred CcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 331 AGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 331 a~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
+...... ....+|+.|+|||++.++. +.++|||||||++|||++|.+||.+..... +.
T Consensus 228 a~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-----------~~-------- 285 (681)
T 2pzi_A 228 VSRINSF--GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-----------LP-------- 285 (681)
T ss_dssp CEETTCC--SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------CC--------
T ss_pred chhcccC--CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------cc--------
Confidence 9876443 4557899999999997764 889999999999999999998876421000 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERP-TMRSIFEELDRQ 455 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~~l 455 (473)
........+..+.+||.+||+.||.+|| +++++.+.|..+
T Consensus 286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000123457789999999999999999 577777777754
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.1e-38 Score=305.56 Aligned_cols=231 Identities=17% Similarity=0.247 Sum_probs=177.4
Q ss_pred hcccccC-cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHH-HhCCCCCcccceeeeec--CC
Q 011995 174 CHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTL-ASLQHPNLCKLLGFHAR--DG 249 (473)
Q Consensus 174 ~~~f~~~-~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~HpnIv~l~g~~~~--~~ 249 (473)
.++|... +.||+|+||.||+|....+ .+.+++|+... ...+.+|+.++ +.++||||+++++++.. .+
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRT---QEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCC---CcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 4567776 7899999999999986443 44556665532 35677899988 55699999999999865 22
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEEe
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKLS 326 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl~ 326 (473)
....++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEe
Confidence 36789999999999999999764 3346999999999999999999999999 999999999999998 7899999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
|||++.... +..++.++|||||||++|||++|..||............
T Consensus 163 Dfg~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~------------ 210 (299)
T 3m2w_A 163 DFGFAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM------------ 210 (299)
T ss_dssp CCTTCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS------------
T ss_pred ccccccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH------------
Confidence 999986542 234678899999999999999999999765432211000
Q ss_pred cccccccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 407 LSLIMDPQLKGRFP----LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 407 ~~~~~~~~l~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.... ..++ ..++.++.+|+.+||+.||.+|||+.|+++.
T Consensus 211 ~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000 0111 2356889999999999999999999999974
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=325.60 Aligned_cols=246 Identities=15% Similarity=0.154 Sum_probs=180.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCC-CCccccee-------
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQH-PNLCKLLG------- 243 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g------- 243 (473)
+.+|...++||+|+||+||+|....+ +..+++|+..... .....+.+.+|+.++..++| .|...+..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~---g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQET---GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 153 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTT---CCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred ceeEEEecccccCCCEEEEEEEecCC---CCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence 34677889999999999999996543 3466677666432 23346789999999999987 32221111
Q ss_pred --e------------eecCC---CCceEEEEEeccCCChhhhhhc----CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 011995 244 --F------------HARDG---SDQRMLIYERLFHGSLDRLIYG----RSDGPPIDWNTRVKIALCAAQGLTFLHEEGP 302 (473)
Q Consensus 244 --~------------~~~~~---~~~~~lV~E~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~ 302 (473)
. +.... ...++++|+++ +++|.+++.. ......+++..+..++.||+.||+|||+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~- 231 (413)
T 3dzo_A 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG- 231 (413)
T ss_dssp CEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred hhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-
Confidence 1 11110 13467777765 6899988841 122446889999999999999999999999
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhh----------hcCCCCCcCCchHHHHHH
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETL----------ERGLLTPKSNVWSFGIVL 372 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~----------~~~~~s~~sDvwSlGvvl 372 (473)
||||||||+||||+.++.+||+|||+++..... .....+ +.|+|||++ .+..++.++|||||||++
T Consensus 232 --iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 232 --LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp --EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred --cccCCcccceEEEecCCeEEEEeccceeecCCc-cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999998765433 344566 999999999 444578899999999999
Q ss_pred HHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 373 LELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 373 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
|||++|+.||.......... .+... ...++.++.+||.+||+.||.+||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~~~----------------~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGSE----------------WIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCSG----------------GGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhhHH----------------HHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999997654322111 00000 1123478999999999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.2e-38 Score=310.60 Aligned_cols=245 Identities=9% Similarity=0.036 Sum_probs=181.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-------CChhhHhHHHHHHHHHhCC---------CCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-------SSQGVKEFINDVNTLASLQ---------HPN 237 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Ei~~l~~l~---------Hpn 237 (473)
.++|+..+.||+|+||.||+|+.. ++.+++|+..... .....+.+.+|+.+++.++ |||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~n 93 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIAD-----HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEG 93 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEET-----TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCC
T ss_pred cccchheeeecccCceEEEEEEeC-----CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCc
Confidence 467899999999999999999862 2556677666542 2233477899999999886 555
Q ss_pred ccccee-----------------eeecC-----------CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHH
Q 011995 238 LCKLLG-----------------FHARD-----------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289 (473)
Q Consensus 238 Iv~l~g-----------------~~~~~-----------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ 289 (473)
||++++ ++.+. +....||||||+++|++.+.+.. ..+++..+..++.|
T Consensus 94 iv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 94 FIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQ 169 (336)
T ss_dssp BCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHH
T ss_pred hhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHH
Confidence 555554 43320 13789999999999977776632 45899999999999
Q ss_pred HHHHHHHhh-hcCCCceeecCCCCCceeeCCCC--------------------cEEEeccCCCcccCCCCccCccccccc
Q 011995 290 AAQGLTFLH-EEGPFQAMYNEFSTANIQIDKDF--------------------SAKLSGYGCAGHIPETDISNSSVAAAN 348 (473)
Q Consensus 290 i~~~L~yLH-~~~~~~ivHrDlkp~NILl~~~~--------------------~vkl~DFGla~~~~~~~~~~~~~t~~y 348 (473)
|+.||+||| +++ ||||||||+||||+.++ .+||+|||+++..... ...+|+.|
T Consensus 170 i~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y 243 (336)
T 2vuw_A 170 LTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCT
T ss_pred HHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecc
Confidence 999999999 899 99999999999999887 8999999999876432 44789999
Q ss_pred CChhhhhcCCCCCcCCchHHHHH-HHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHH
Q 011995 349 LSVETLERGLLTPKSNVWSFGIV-LLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTV 427 (473)
Q Consensus 349 ~aPE~~~~~~~s~~sDvwSlGvv-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 427 (473)
||||++.+.. +.++|||||+++ .+++++|..||...... ....... . . ...............++.++
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~--~~~~~~~---~-~----~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL--HYLTDKM---L-K----QMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH--HHHHHHH---H-H----TCCCSSCCCSHHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh--hHHHHhh---h-h----hhccCcccchhhhhhcCHHH
Confidence 9999998766 889999998777 77888999988431000 0000000 0 0 00000011111245788999
Q ss_pred HHHHHHhcccCCCCCCCHHHHH
Q 011995 428 ADIALRCLQKEPSERPTMRSIF 449 (473)
Q Consensus 428 ~~li~~cl~~dP~~RPt~~eil 449 (473)
.+||.+||++| |+.|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999977 999988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.4e-31 Score=281.35 Aligned_cols=184 Identities=16% Similarity=0.115 Sum_probs=125.1
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC---------CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---------SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
++.|++|.+..++ ....+..+++|++.... .....++|.+|+++|+++ .|+||+++++++.++ ..
T Consensus 242 ~~~~~~~~h~~~r---r~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~--~~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSR---RYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA--QS 316 (569)
T ss_dssp -C--------CCE---EEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS--SE
T ss_pred cccCCcccccccc---cccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC--CE
Confidence 3445555444332 22234455666665432 123346799999999999 799999999999876 88
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.||||||++|++|.++|.. ..+++.. +|+.||+.||+|||++| ||||||||+||||+.+|.+||+|||+|+
T Consensus 317 ~yLVMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr 387 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIV 387 (569)
T ss_dssp EEEEEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEE
T ss_pred EEEEEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCe
Confidence 9999999999999999954 3456654 58899999999999999 9999999999999999999999999998
Q ss_pred ccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCC
Q 011995 333 HIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKN 381 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p 381 (473)
..... ...+.+||+.|||||++.+ .+..++|+||+|+++++|.++..+
T Consensus 388 ~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 388 TTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp SCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred eCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 76543 2345588999999999865 467889999999998887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=3.4e-28 Score=255.72 Aligned_cols=183 Identities=14% Similarity=0.103 Sum_probs=139.1
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-C------hhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-S------QGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...+.||+|+||.||+|.+.+... +++....... . ...+.+.+|+++|++++||||+++..++...
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-- 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDV-----IIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL-- 411 (540)
T ss_dssp ---------CCEEEEEEECSSCEE-----EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET--
T ss_pred CCCCEEeeCCCEEEEEEEECCCeE-----EEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC--
Confidence 345789999999999996544322 2333222211 1 1135589999999999999999666666554
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..||||||+++++|.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGl 475 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGL 475 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTT
T ss_pred CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECcc
Confidence 667999999999999999843 5689999999999999999 999999999999999 999999999
Q ss_pred CcccCCCCc---------cCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 331 AGHIPETDI---------SNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 331 a~~~~~~~~---------~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
++....... ....+|+.|||||++.. ..|+..+|+|+..+-.++.+.++.+|.
T Consensus 476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 988754321 24578999999999977 557888999999999999888877663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.2e-23 Score=201.30 Aligned_cols=163 Identities=12% Similarity=0.103 Sum_probs=122.9
Q ss_pred HHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC-----------------hhhHhHHHHHHHHHh
Q 011995 170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----------------QGVKEFINDVNTLAS 232 (473)
Q Consensus 170 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~Ei~~l~~ 232 (473)
+......|...+.||+|+||.||+|... .+..+++|+.+..... .....+.+|+.+|.+
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSE----KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEET----TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeC----CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 3344455677799999999999999972 2345556665432110 134668999999999
Q ss_pred CCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 233 l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
++ | +++.+++.. +..|+||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||
T Consensus 161 l~--~-~~v~~~~~~---~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp 221 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW---EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQ 221 (282)
T ss_dssp TT--T-SSSCCEEEE---ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCST
T ss_pred cc--C-CCcCeEEec---cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCH
Confidence 99 5 777776543 45699999999999988 411 224579999999999999999 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhc----------CCCCCcCCchH
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLER----------GLLTPKSNVWS 367 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~----------~~~s~~sDvwS 367 (473)
+|||++ ++.+||+|||+++. +..|+|||++.. ..|+..+|+|.
T Consensus 222 ~NILl~-~~~vkl~DFG~a~~-----------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 222 YNVLVS-EEGIWIIDFPQSVE-----------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp TSEEEE-TTEEEECCCTTCEE-----------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHEEEE-CCcEEEEECCCCeE-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999 99999999999864 345788998754 34556666664
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=5.3e-19 Score=168.32 Aligned_cols=138 Identities=14% Similarity=0.048 Sum_probs=101.5
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeE--EEEEEEecCCCC-----------------------hhhHhHHHHHHHHH
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKK--FEATVTRLNPSS-----------------------QGVKEFINDVNTLA 231 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~--~~~~~~~~~~~~-----------------------~~~~~~~~Ei~~l~ 231 (473)
|...+.||+|+||.||+|.... .+.. +++|+.+..... .....+.+|+.+|.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~---~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVF---DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEE---TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcC---CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 5677899999999999998621 2234 566664432110 01135789999999
Q ss_pred hCCCCCc--ccceeeeecCCCCceEEEEEeccC-C----ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCC
Q 011995 232 SLQHPNL--CKLLGFHARDGSDQRMLIYERLFH-G----SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH-EEGPF 303 (473)
Q Consensus 232 ~l~HpnI--v~l~g~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-~~~~~ 303 (473)
++.|+++ ..++++ ...+|||||+.+ | +|.++... .++..+..++.|++.+|.||| +.+
T Consensus 126 ~l~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g-- 191 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE-- 191 (258)
T ss_dssp HHHHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC--
T ss_pred HHHhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC--
Confidence 9988865 333321 356899999942 4 66665421 224567889999999999999 888
Q ss_pred ceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 304 ~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||||||||+|||++. .++|+|||++...
T Consensus 192 -ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 192 -LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp -EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred -EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999999998 9999999999754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.6e-16 Score=155.54 Aligned_cols=138 Identities=10% Similarity=0.077 Sum_probs=93.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-------------ChhhHhH--------HHHHHHHHhCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-------------SQGVKEF--------INDVNTLASLQ 234 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--------~~Ei~~l~~l~ 234 (473)
-|.+.+.||.|+||.||+|...+ ++.+|+|+.+.... ....... .+|...|.++.
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~----G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~ 171 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEK----GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY 171 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTT----CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCEeeeCCceEEEEEECCC----CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998543 45567776553210 0001112 24555555554
Q ss_pred CCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCc
Q 011995 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTAN 314 (473)
Q Consensus 235 HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~N 314 (473)
+.++.-..-+.. ...+|||||+++++|.++.. . .....++.|++.+|.|||..| ||||||||.|
T Consensus 172 ~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~-------~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~N 235 (397)
T 4gyi_A 172 EEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSS-------V--PDPASLYADLIALILRLAKHG---LIHGDFNEFN 235 (397)
T ss_dssp HTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCC-------C--SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTS
T ss_pred hcCCCCCeeeec----cCceEEEEecCCccHhhhcc-------c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHH
Confidence 433321111111 22479999999988876541 1 124578899999999999999 9999999999
Q ss_pred eeeCCCC----------cEEEeccCCCcc
Q 011995 315 IQIDKDF----------SAKLSGYGCAGH 333 (473)
Q Consensus 315 ILl~~~~----------~vkl~DFGla~~ 333 (473)
||+++++ .+.|+||+-+..
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEEeCCCCcccccccccceEEEEeCCccc
Confidence 9998776 389999986543
No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=8.3e-12 Score=118.35 Aligned_cols=148 Identities=11% Similarity=0.062 Sum_probs=108.2
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeec
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHAR 247 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~ 247 (473)
.+.....+|.....++.|+++.||++...+ ..+.+|+..... ......+.+|+++++.+. +..+.++++++..
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~~-----~~~vlK~~~~~~-~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~ 81 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGEN-----ENLYLKMTDSRY-KGTTYDVEREKDMMLWLEGKLPVPKVLHFERH 81 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECSS-----CEEEEEEECGGG-TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECCC-----CcEEEEeCCccc-CCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 345566788888889989999999997332 233344443211 122346889999999984 6677889888876
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE--------------------------- 300 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~--------------------------- 300 (473)
. +..|+||||++|.+|.+.+.. ......++.+++.+|..||+.
T Consensus 82 ~--~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 82 D--GWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp T--TEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred C--CceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 5 678999999999999876411 122347888999999999981
Q ss_pred -----------------------------CCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 301 -----------------------------GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 301 -----------------------------~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++.++|+|+++.|||++.+..+.|+||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11349999999999999876667799998764
No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=1.1e-10 Score=109.90 Aligned_cols=139 Identities=11% Similarity=0.074 Sum_probs=93.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--cccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~ 251 (473)
..+|....+.+.|..+.||++...++. .+.+|+... . ....+.+|+.+++.+.+.+ +.+++++.... +
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~----~~vlK~~~~--~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~--~ 88 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRP----VLFVKTDLS--G--ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--G 88 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSC----CEEEEEECS--C--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--S
T ss_pred cCCCceEecccCCCCceEEEEecCCCC----eEEEEeCCc--c--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC--C
Confidence 334444333345666999999754332 233444322 1 3356889999999986545 44577776554 5
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG------------------------------ 301 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------------------------------ 301 (473)
..++||||++|.+|. .. . .. ...++.+++..|..||...
T Consensus 89 ~~~~v~e~i~G~~l~--~~--~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 1nd4_A 89 RDWLLLGEVPGQDLL--SS--H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDD 157 (264)
T ss_dssp CEEEEEECCSSEETT--TS--C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTS
T ss_pred CCEEEEEecCCcccC--cC--c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchh
Confidence 689999999998884 21 1 11 2356777888888888643
Q ss_pred -------------------------CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 302 -------------------------PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 302 -------------------------~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+..++|+|++|.|||++.++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 158 LDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998877678999998753
No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.10 E-value=3.4e-10 Score=112.47 Aligned_cols=145 Identities=9% Similarity=0.054 Sum_probs=101.0
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEe--cCCCChhhHhHHHHHHHHHhCC--CCCcccceeeeecCCC-Cce
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTR--LNPSSQGVKEFINDVNTLASLQ--HPNLCKLLGFHARDGS-DQR 253 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~-~~~ 253 (473)
..+.|+.|.++.||+....+. .+.+++.. ..........+.+|+.+++.+. +..+.+++.++.+... +..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~-----~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~ 116 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQ-----TYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA 116 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSC-----EEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred eEEEcCCcccceEEEEEECCc-----eEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence 346789999999999975432 22233222 1111123457889999999996 4557788887754321 357
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-------------------------------- 301 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------------------------------- 301 (473)
|+||||++|..+.+.. ...++...+..++.+++..|..||...
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 8999999998875422 123678888999999999999999731
Q ss_pred -----------------------CCceeecCCCCCceeeCCCCc--EEEeccCCCcc
Q 011995 302 -----------------------PFQAMYNEFSTANIQIDKDFS--AKLSGYGCAGH 333 (473)
Q Consensus 302 -----------------------~~~ivHrDlkp~NILl~~~~~--vkl~DFGla~~ 333 (473)
+..++|+|+++.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999998764
No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=2.5e-09 Score=103.56 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=117.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCC--cccceeeeecCC-CCceEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPN--LCKLLGFHARDG-SDQRML 255 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-Hpn--Iv~l~g~~~~~~-~~~~~l 255 (473)
.+.++.|.+..||+.. +. +.+++.. .......+.+|+++|+.+. +.. +.+++.+....+ ....|+
T Consensus 25 i~~~~~G~~n~v~~v~---~~-----~vlR~~~---~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN---RD-----FIFKFPK---HSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST---TS-----EEEEEES---SHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred eEecCCCCcceEEEEC---CE-----EEEEecC---CcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence 3568999999999873 21 2233322 2234567899999998883 333 334443332221 123588
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC----------------------------------
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG---------------------------------- 301 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~---------------------------------- 301 (473)
||++++|.+|.+... ..++...+..++.+++..|..||+..
T Consensus 94 vm~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 999999988875432 13677788888888888888888611
Q ss_pred ---------------------CCceeecCCCCCceeeCC--CCcEEEeccCCCcccCCC-CccCcccccccCChhhhhc-
Q 011995 302 ---------------------PFQAMYNEFSTANIQIDK--DFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLER- 356 (473)
Q Consensus 302 ---------------------~~~ivHrDlkp~NILl~~--~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~- 356 (473)
++.++|+|+++.|||++. +..+.|+||+.+...... +............++....
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHH
Confidence 245899999999999998 556889999987653211 1000000000023332211
Q ss_pred ----CCC---------CCcCCchHHHHHHHHHHcCCCCC
Q 011995 357 ----GLL---------TPKSNVWSFGIVLLELLTGRKNL 382 (473)
Q Consensus 357 ----~~~---------s~~sDvwSlGvvl~elltG~~p~ 382 (473)
+.. ..-.+.|+++.++|++.+|..+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111 11257899999999999998765
No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=2.3e-07 Score=90.45 Aligned_cols=137 Identities=14% Similarity=0.080 Sum_probs=95.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC---C-CcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH---P-NLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H---p-nIv~l~g~~~~~~~~ 251 (473)
.....+.++.|....||+. +.. +.+++. ........+.+|.++|..+.+ + .+.+++++ +
T Consensus 38 ~i~~v~~l~~G~~n~vy~v---g~~-----~vlR~~---~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~------~ 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC---NEQ-----YVVKVP---KRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ------S 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE---TTT-----EEEEEE---SSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE------C
T ss_pred ceEEEEeCCCCCCceEEEE---CCE-----EEEEeC---CcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec------C
Confidence 4555678999999999998 222 123322 122334568899999998866 1 23444443 3
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-----------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP----------------------------- 302 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~----------------------------- 302 (473)
..++||||++|.+|.+... ..++...+..++.+++..|..||+...
T Consensus 101 ~~~lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISIL 175 (320)
T ss_dssp SSCEEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHH
Confidence 4579999999998864331 135667777888888888888885432
Q ss_pred -------------------------------CceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 303 -------------------------------FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 303 -------------------------------~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+.++|+|+++.|||++.+..+.|+||+.+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 176 EKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999988543
No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.39 E-value=2.9e-06 Score=82.07 Aligned_cols=136 Identities=14% Similarity=0.139 Sum_probs=89.7
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC---CcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP---NLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~~~~~~~~~lV~ 257 (473)
..++.|....||+. +.. +.+++- ........+.+|.++|..+.+. .+.+++.++... .+..++||
T Consensus 25 ~~l~~G~~n~v~~v---g~~-----~VlR~~---~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~-~g~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV---NGD-----WVFRFP---KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS-DGNPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE---TTT-----EEEEEE---SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT-TSCEEEEE
T ss_pred eecCCCcceeEEEE---CCE-----EEEEec---CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC-CCceEEEE
Confidence 56788888899988 222 123321 2233456789999999999653 245666665422 35678999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-------------------------------------
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE------------------------------------- 300 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~------------------------------------- 300 (473)
||++|..|.+.... .++......++.+++..|..||+.
T Consensus 93 e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~ 167 (306)
T 3tdw_A 93 RKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDES 167 (306)
T ss_dssp ECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHH
T ss_pred eccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchh
Confidence 99999888763211 234455555555555555555542
Q ss_pred --------------------CCCceeecCCCCCceeeCC---CCc-EEEeccCCCcc
Q 011995 301 --------------------GPFQAMYNEFSTANIQIDK---DFS-AKLSGYGCAGH 333 (473)
Q Consensus 301 --------------------~~~~ivHrDlkp~NILl~~---~~~-vkl~DFGla~~ 333 (473)
.++.++|+|+++.|||++. ++. +.|+||+.+..
T Consensus 168 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 168 LRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 355 58999997754
No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=4.3e-06 Score=78.99 Aligned_cols=136 Identities=16% Similarity=0.071 Sum_probs=89.9
Q ss_pred ceeecCCc-eEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEEEEEe
Q 011995 182 CISEGLSS-VMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 182 ~lG~G~~g-~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
.+..|..| .||+.....+. ..+.+|+.. ......+.+|..+|+.+. +--+.++++++.+. +..++|||+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~---~~~~lk~~~----~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--~~~~lvme~ 101 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNA---PELFLKHGK----GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--DDAWLLTTA 101 (272)
T ss_dssp EEECSSSSCEEEEEECCTTC---CCEEEEEEE----THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--TEEEEEEEC
T ss_pred EccCCCcCCeEEEEEecCCC---eEEEEEECC----CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--CeEEEEEEe
Confidence 45556665 69987643332 222244332 223466889999999884 32356778887765 678999999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-------------------------------------- 301 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------------------------------------- 301 (473)
++|.++.+..... ......++.+++..|.-||...
T Consensus 102 l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 102 IPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 9998877655221 1223445566666666666421
Q ss_pred -----------------CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 302 -----------------PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 302 -----------------~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12479999999999999887778999997753
No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.21 E-value=5.1e-06 Score=82.38 Aligned_cols=144 Identities=14% Similarity=0.141 Sum_probs=83.9
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--cccceeeeecCCCCceEE
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHARDGSDQRML 255 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~l 255 (473)
.....|+.|....+|+....+ ..+.+++.. .. ..+.+|..++..+.... +.++++++.... +..|+
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g-----~~~vlK~~~---~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~~~l 111 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGG-----RGYVLRVNS---CA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SLTYC 111 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETT-----EEEEEEEES---CC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SCEEE
T ss_pred ceEEECCCCCcceEEEEEECC-----cEEEEEeCC---ch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CCeEE
Confidence 344678899999999987532 223233332 11 35889999999886543 456666665543 56899
Q ss_pred EEEeccCCChhhh------------------hhcCCCCC--C------------CCHHHH--------------------
Q 011995 256 IYERLFHGSLDRL------------------IYGRSDGP--P------------IDWNTR-------------------- 283 (473)
Q Consensus 256 V~E~~~~gsL~~~------------------l~~~~~~~--~------------l~~~~~-------------------- 283 (473)
||||++|..|.+. |+...... . -.|...
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999987655321 11110000 0 011111
Q ss_pred -HHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 284 -VKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 284 -~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
......+...+.++... .++.++|+|+.+.|||++.++.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 01111122222333211 124689999999999998877788999998754
No 264
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.19 E-value=1.9e-05 Score=75.60 Aligned_cols=77 Identities=13% Similarity=0.054 Sum_probs=53.5
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC---CcccceeeeecCCCCceE
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP---NLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~~~~~~~~~ 254 (473)
...+.|+.|.++.||++...++.. +.+|+... ........|.+|++.|+.+.+. .+.+++++. ..+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~----~vvK~~~~-~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~ 86 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTP----LFVKALPD-DAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRT 86 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCE----EEEEECCT-TCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTE
T ss_pred cceeeeCCcchhheEEEEeCCCCe----EEEEecCC-CCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcE
Confidence 345789999999999998765432 22333221 1222346789999999999775 466776642 358
Q ss_pred EEEEeccCCCh
Q 011995 255 LIYERLFHGSL 265 (473)
Q Consensus 255 lV~E~~~~gsL 265 (473)
+||||++++.+
T Consensus 87 lvme~l~g~~~ 97 (288)
T 3d1u_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEecccCCC
Confidence 99999999875
No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=1.2e-05 Score=79.17 Aligned_cols=87 Identities=10% Similarity=0.024 Sum_probs=49.8
Q ss_pred cce-eecCCceEEEEEEC---CCCeeeeEEEEEEEecCCC--ChhhHhHHHHHHHHHhCC-C--CCcccceeeeecCC-C
Q 011995 181 RCI-SEGLSSVMYRASFG---DDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-H--PNLCKLLGFHARDG-S 250 (473)
Q Consensus 181 ~~l-G~G~~g~Vy~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~-H--pnIv~l~g~~~~~~-~ 250 (473)
+.| +.|....+|+.... ++......+.+++...... ......+.+|+.+++.+. + -.+.+++.++.+.. .
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 556 77888899988643 1110123333333221100 001356788999998884 2 34667777664431 1
Q ss_pred CceEEEEEeccCCChhh
Q 011995 251 DQRMLIYERLFHGSLDR 267 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~ 267 (473)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999998877653
No 266
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.85 E-value=0.00011 Score=73.47 Aligned_cols=77 Identities=10% Similarity=0.069 Sum_probs=44.0
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC------CChhhHhHHHHHHHHHhCCC--CCc-ccceeeeecCCC
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQH--PNL-CKLLGFHARDGS 250 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ei~~l~~l~H--pnI-v~l~g~~~~~~~ 250 (473)
.+.||.|.++.||++....+ .+.+.+|...... .......+..|.++|..+.. +.. .+++.+ +.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~---~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~-- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEH---DRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT-- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET--
T ss_pred EEECCCCceEEEEEEEECCC---CcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cC--
Confidence 35789999999999964322 2233343322110 01123456789999888742 333 355543 22
Q ss_pred CceEEEEEeccCC
Q 011995 251 DQRMLIYERLFHG 263 (473)
Q Consensus 251 ~~~~lV~E~~~~g 263 (473)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 4568999999764
No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.82 E-value=0.00012 Score=71.32 Aligned_cols=31 Identities=6% Similarity=0.056 Sum_probs=27.1
Q ss_pred CCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 3459999999999999888899999999764
No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.52 E-value=0.0006 Score=65.84 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=85.1
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeeeecCCCCceEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~~~lV 256 (473)
.+.|+.|....+|+....+ ..+.+|+... .....+..|.+.|+.+. ...+.+++.++... +..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~~~-----~~~vlK~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDEV-----QTVFVKINER----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GHSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEESSS-----CEEEEEEEEG----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SEEEEE
T ss_pred eEEeCCccceeeeEEEECC-----CeEEEEeCCc----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--CceEEE
Confidence 3578999999999987422 2233443331 23466889999998883 35677888777654 678999
Q ss_pred EEeccCCChhh-----------hhhcCCCCC-------------------CCCHHHHH---HHH----------------
Q 011995 257 YERLFHGSLDR-----------LIYGRSDGP-------------------PIDWNTRV---KIA---------------- 287 (473)
Q Consensus 257 ~E~~~~gsL~~-----------~l~~~~~~~-------------------~l~~~~~~---~i~---------------- 287 (473)
|||+++..+.. .|+...... .-+|.... ++.
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999876521 122221100 11454321 111
Q ss_pred HHHHHH-HHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 288 LCAAQG-LTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 288 ~~i~~~-L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
..++.. ...|.. ..++.+||+|+.+.||+++.++ +.|+||.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 112212 223432 2246799999999999999887 8899984
No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.27 E-value=0.0013 Score=66.23 Aligned_cols=75 Identities=11% Similarity=-0.014 Sum_probs=44.2
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-CccCcc--cccccCChhhhhcCC---CCCcCCchHHHHHHHHHH
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-DISNSS--VAAANLSVETLERGL---LTPKSNVWSFGIVLLELL 376 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-~~~~~~--~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~ell 376 (473)
..++|+|+++.|||++.++ +.|+||+.+..-... +..... ....|++++...... .....++..+...+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 3599999999999999876 999999987643211 111111 013355555442111 111234456777777776
Q ss_pred cC
Q 011995 377 TG 378 (473)
Q Consensus 377 tG 378 (473)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 270
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.25 E-value=0.0017 Score=61.59 Aligned_cols=79 Identities=13% Similarity=0.054 Sum_probs=49.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC---CcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP---NLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~~~~~~~ 252 (473)
.......+|.|..+.||+..+.++.. +.+|+... ........|.+|...|+.+.-- -+.+++++ + .
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~----~~vK~~~~-~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~----~ 84 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTP----LFVKALPD-DAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D----D 84 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCE----EEEEECCT-TCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E----T
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCE----EEEEEeCC-CCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c----C
Confidence 34556789999999999999877643 22332221 1222234578899999988422 23444443 1 2
Q ss_pred eEEEEEeccCCCh
Q 011995 253 RMLIYERLFHGSL 265 (473)
Q Consensus 253 ~~lV~E~~~~gsL 265 (473)
-++||||++++..
T Consensus 85 ~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 85 RTLAMEWVDERPP 97 (288)
T ss_dssp TEEEEECCCCCCC
T ss_pred ceEEEEeecccCC
Confidence 3789999987654
No 271
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.23 E-value=0.0015 Score=63.02 Aligned_cols=159 Identities=12% Similarity=0.043 Sum_probs=86.0
Q ss_pred CCCHHHHHHHhcccccC-----cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC-
Q 011995 164 NFPLDEVAAACHNFFSD-----RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN- 237 (473)
Q Consensus 164 ~~~~~el~~~~~~f~~~-----~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn- 237 (473)
.++.+++......|... +.|+.|....+|+....++. +.+++.... .....+..|+.++..+....
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~-----~vlk~~~~~---~~~~~l~~e~~~l~~L~~~g~ 77 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-----LILTLYEKR---VEKNDLPFFLGLMQHLAAKGL 77 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-----EEEEEECC------CCHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCcc-----EEEEEeCCC---CCHHHHHHHHHHHHHHHHCCC
Confidence 46778888887778653 34566777899998765432 223333221 12345667888887773222
Q ss_pred -cccceee------eecCCCCceEEEEEeccCCChhh--------------hhhcCC-C--CC---CC---CHHHHHH--
Q 011995 238 -LCKLLGF------HARDGSDQRMLIYERLFHGSLDR--------------LIYGRS-D--GP---PI---DWNTRVK-- 285 (473)
Q Consensus 238 -Iv~l~g~------~~~~~~~~~~lV~E~~~~gsL~~--------------~l~~~~-~--~~---~l---~~~~~~~-- 285 (473)
+.+++.. .... +..++||+|++|..+.. .++... . .. .. .|.....
T Consensus 78 ~vP~~~~~~~g~~~~~~~--g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~ 155 (322)
T 2ppq_A 78 SCPLPLPRKDGELLGELS--GRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKS 155 (322)
T ss_dssp CCCCBCCBTTCCSCEEET--TEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHH
T ss_pred CCCcccCCCCCCEEEEEC--CEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHH
Confidence 2333321 1111 45689999998865421 111110 0 00 01 2322111
Q ss_pred ----------HHHHHHHHHHHhhhc----CCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 286 ----------IALCAAQGLTFLHEE----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 286 ----------i~~~i~~~L~yLH~~----~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+...+...+++++.. .+..++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 156 ~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 156 EERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011134455555532 23459999999999999987666899998764
No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.12 E-value=0.0017 Score=63.01 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=27.2
Q ss_pred CCceeecCCCCCceeeCCC----CcEEEeccCCCcc
Q 011995 302 PFQAMYNEFSTANIQIDKD----FSAKLSGYGCAGH 333 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~----~~vkl~DFGla~~ 333 (473)
+..++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3469999999999999874 6799999998754
No 273
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.12 E-value=0.0017 Score=62.13 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=25.4
Q ss_pred CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+..++|+|+.+.||+ ..++.+.|+||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5566789999987753
No 274
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.012 Score=56.61 Aligned_cols=159 Identities=11% Similarity=0.114 Sum_probs=84.0
Q ss_pred CCCHHHHHHHhccccc-----CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC--
Q 011995 164 NFPLDEVAAACHNFFS-----DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP-- 236 (473)
Q Consensus 164 ~~~~~el~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp-- 236 (473)
.++.+++......|.. ...|+ |....||+....++ +.+.+|+.. ........+..|..++..+...
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g----~~~vlK~~~--~~~~~~~~~~~E~~~~~~L~~~g~ 82 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDR----RRFVVKFYR--PERWTADQILEEHQFALQLVNDEV 82 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTC----CCEEEEEEC--TTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCC----CEEEEEEcC--CCCCCHHHHHHHHHHHHHHHHcCC
Confidence 3666777766666643 23466 77889998864333 222344332 2222345677788888877422
Q ss_pred Ccccceee-----eecCCCCceEEEEEeccCCChhh----h----------hhcC----C--CCCCCCHHHH----HHHH
Q 011995 237 NLCKLLGF-----HARDGSDQRMLIYERLFHGSLDR----L----------IYGR----S--DGPPIDWNTR----VKIA 287 (473)
Q Consensus 237 nIv~l~g~-----~~~~~~~~~~lV~E~~~~gsL~~----~----------l~~~----~--~~~~l~~~~~----~~i~ 287 (473)
.+.+++.. ... .+..++||+|++|..+.. . ++.. . ....+++... ..++
T Consensus 83 ~vp~~~~~~g~~~~~~--~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (328)
T 1zyl_A 83 PVAAPVAFNGQTLLNH--QGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF 160 (328)
T ss_dssp SBCCCCCBTTBSCEEE--TTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHH
T ss_pred eecceeecCCcEEEEE--CCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHH
Confidence 23444432 111 245678999998754320 0 1110 0 0112232211 0010
Q ss_pred ---------------HHHHHHHHHhhh----cCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 288 ---------------LCAAQGLTFLHE----EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 288 ---------------~~i~~~L~yLH~----~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
..+...++.+.. ..+..++|+|+++.|||++ + .+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 161 EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011112223222 1234589999999999999 4 899999987653
No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.83 E-value=0.0026 Score=64.28 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=45.2
Q ss_pred cceeecCCceEEEEEECCCCe----eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCc-ccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGDDAS----TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~~~l 255 (473)
..|+.|....||+....++.. ....+.+++... ......+.+|..++..+...++ .++++++. + .+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~---~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~----~--g~ 149 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN---PETESHLVAESVIFTLLSERHLGPKLYGIFS----G--GR 149 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS---CCCHHHHHHHHHHHHHHHHTTSSSCEEEEET----T--EE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC---CCcHHHHHHHHHHHHHHHhCCCCCcEEEEeC----C--CE
Confidence 567788889999998754211 122333443321 1112566789999988853334 56766542 1 28
Q ss_pred EEEeccCCCh
Q 011995 256 IYERLFHGSL 265 (473)
Q Consensus 256 V~E~~~~gsL 265 (473)
|+||++|.+|
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999976444
No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.80 E-value=0.0042 Score=63.22 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=42.1
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCc-ccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~~~lV~E~ 259 (473)
..|+.|-...+|+....+. ...+.+++... .........+|..++..+...++ .++++++ . + .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~---~~~~vLRi~g~--~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~--~--G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSK---QAKYLIRLYGP--KTDEIINREREKKISCILYNKNIAKKIYVFF--T--N--GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTT---TEEEEEEEECC---CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--T--T--EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCC---CceEEEEECCC--ChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--C--C--eEEEEe
Confidence 5677788889999986541 12222333321 11111122589999999865555 4676665 2 2 259999
Q ss_pred ccCCCh
Q 011995 260 LFHGSL 265 (473)
Q Consensus 260 ~~~gsL 265 (473)
++|..|
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987544
No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.69 E-value=0.005 Score=60.98 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=78.4
Q ss_pred cceeecCCceEEEEEECCCCe----eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGDDAS----TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~l 255 (473)
+.|..|-...+|+....++.. ..+.+.+++ ..........+.+|..+++.+. +.-..++++++. + .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~--~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~----~--g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRL--YGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP----E--GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEE--CC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET----T--EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEE--CCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC----C--cc
Confidence 457778888899998643110 112332332 1221223456678999998884 333356666542 2 28
Q ss_pred EEEeccCCChhhh-----------------hhcCC--CCCCCC--HHHHHHHHHHHHH-------------------HHH
Q 011995 256 IYERLFHGSLDRL-----------------IYGRS--DGPPID--WNTRVKIALCAAQ-------------------GLT 295 (473)
Q Consensus 256 V~E~~~~gsL~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~L~ 295 (473)
||||++|..|... |+... -+.... |..+.++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999988655311 11111 011222 4555555544322 233
Q ss_pred Hhh----hc-CCCceeecCCCCCceeeCCC----CcEEEeccCCCc
Q 011995 296 FLH----EE-GPFQAMYNEFSTANIQIDKD----FSAKLSGYGCAG 332 (473)
Q Consensus 296 yLH----~~-~~~~ivHrDlkp~NILl~~~----~~vkl~DFGla~ 332 (473)
.|. .. .+..++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 332 21 23469999999999999876 789999998764
No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.49 E-value=0.0085 Score=58.95 Aligned_cols=29 Identities=17% Similarity=0.246 Sum_probs=24.2
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
..++|+|+.+.|||++.++ +.|+||..+.
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 3599999999999998665 8999998764
No 279
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.27 E-value=0.0075 Score=54.36 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=62.9
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccC
Q 011995 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISN 341 (473)
Q Consensus 263 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 341 (473)
-+|.++|.. .+.+|++.++..++.|.+.+|.-+-. .. -..+=+.|..|+|..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~~~---~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARRRQ---PRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhccc---CCceecCCcceEEecCCceeccc-cccc---------
Confidence 378898854 35689999999999999998877622 12 11223357899999999988764 2110
Q ss_pred cccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc
Q 011995 342 SSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT 377 (473)
Q Consensus 342 ~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt 377 (473)
.....+.+||... ...+.+.=|||||+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1122445677653 234567789999999998876
No 280
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.88 E-value=0.027 Score=56.02 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=26.6
Q ss_pred CCceeecCCCCCceeeCCC------CcEEEeccCCCc
Q 011995 302 PFQAMYNEFSTANIQIDKD------FSAKLSGYGCAG 332 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~------~~vkl~DFGla~ 332 (473)
+..++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 3468999999999999876 789999998664
No 281
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=94.36 E-value=0.013 Score=63.64 Aligned_cols=61 Identities=10% Similarity=0.080 Sum_probs=32.5
Q ss_pred CCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhhhhhhhhhccchhhhhhhhhhcc
Q 011995 34 PEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSR 103 (473)
Q Consensus 34 ~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (473)
..+.+..|.|+|.||..+..++.|+.|| ||+|+ +.|.+|..... +.+...+|.||...|+.
T Consensus 683 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~---ls~N~-l~g~iP~~~~~-----~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 683 NILDLSSNKLDGRIPQAMSALTMLTEID---LSNNN-LSGPIPEMGQF-----ETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CEEECCSSCCEECCCGGGGGCCCCSEEE---CCSSE-EEEECCSSSSG-----GGSCGGGGCSCTEEEST
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEE---CcCCc-ccccCCCchhh-----ccCCHHHhcCCchhcCC
Confidence 3344455555555555555555555555 55555 55555554221 12344567777777754
No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.14 E-value=0.24 Score=49.54 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=78.9
Q ss_pred cceeecCCceEEEEEECCCCee----eeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC-cccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGDDAST----SKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-LCKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~~~~~~l 255 (473)
+.|..|-...+|+....++... ...+.+.+. .......-...+|..+++.+...+ ..++++.+ . -++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~--g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~----~~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIY--GKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P----EGR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEEC--CCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T----TEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEEC--CCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C----CCE
Confidence 5677788888999987532211 233333332 222222233468888888884333 34565433 2 268
Q ss_pred EEEeccCCChhh--h---------------hhc----C---C---CCCCCCHHHHHHHHHHH------------------
Q 011995 256 IYERLFHGSLDR--L---------------IYG----R---S---DGPPIDWNTRVKIALCA------------------ 290 (473)
Q Consensus 256 V~E~~~~gsL~~--~---------------l~~----~---~---~~~~l~~~~~~~i~~~i------------------ 290 (473)
||||++|..|.. + ||. . . ...+.-|..+.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999998865421 0 011 0 0 11112344444443322
Q ss_pred -HHHHHHhh---------------------hcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 291 -AQGLTFLH---------------------EEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 291 -~~~L~yLH---------------------~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
...+.+|. ...+..++|+|+.+.||+ +.++.+.|+||..+.
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 12233332 112346899999999999 778899999998775
No 283
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=93.38 E-value=0.0004 Score=71.48 Aligned_cols=31 Identities=10% Similarity=-0.063 Sum_probs=25.4
Q ss_pred hhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 218 ~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
.+.++|..|++.+.+++|+|+|+++|||...
T Consensus 321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 321 QGSETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 4467899999999999999999999999754
No 284
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.46 E-value=0.73 Score=45.57 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=24.3
Q ss_pred ceeecCCCCCceee------CCCCcEEEeccCCCc
Q 011995 304 QAMYNEFSTANIQI------DKDFSAKLSGYGCAG 332 (473)
Q Consensus 304 ~ivHrDlkp~NILl------~~~~~vkl~DFGla~ 332 (473)
.++|+|+.+.|||+ +++..+.++||-.|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456779999998764
No 285
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.90 E-value=1.6 Score=39.06 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=77.3
Q ss_pred CCCCcccceeeeecCCCCceEEEEEeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 234 ~HpnIv~l~g~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
.||+++.. .+..++ +.+.+.|+.-+++ ++.. + ..++...+++++.+|+....+++. -+|--|.|
T Consensus 43 ~~~~Fl~~-~I~e~e--D~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 43 HSPYFIDA-ELTELR--DSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp CCTTBCCE-EEEECS--SEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred cCCcccce-EEEEcc--cEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 68888876 344443 5665655543322 2222 3 236789999999999887765554 47888999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
+||+++.++.+++.-.|+-..+.... +..|.+ .-.+=|++..+++++..|.
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l~P~~----------~~ee~f----------L~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVVDPLP----------VSEAEF----------LTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTBSCCC----------CCHHHH----------HHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEcCCCCEEEEEccCccCCCCCC----------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 99999999999999888754432211 223333 3466788899999988774
No 286
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=88.06 E-value=0.36 Score=46.63 Aligned_cols=32 Identities=6% Similarity=0.094 Sum_probs=27.6
Q ss_pred CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34699999999999999888899999987654
No 287
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=87.82 E-value=0.21 Score=54.12 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=27.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
+.|..+.+..|.|+|.+|..+.+++.|+.|| ||+|+ ++|.+|+++.
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~---Ls~N~-l~g~ip~~l~ 677 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILN---LGHND-ISGSIPDEVG 677 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEE---CCSSC-CCSCCCGGGG
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEe---CcCCc-cCCCCChHHh
Confidence 3455556666666666666666666666666 66666 6666665543
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=86.79 E-value=0.19 Score=47.91 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=53.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhhhhhhhhhccchhhhhhhhhhc
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKS 102 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (473)
..+.|.++.+..|.|+|.+|..+..++.|+.|+ |++|+ +.|.+|.... -..+..+.+.+|...|+
T Consensus 242 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~---Ls~N~-l~~~ip~~~~-----l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN---VSFNN-LCGEIPQGGN-----LQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEE---CCSSE-EEEECCCSTT-----GGGSCGGGTCSSSEEES
T ss_pred ccCCCCEEECcCCcccCcCChHHhcCcCCCEEE---CcCCc-ccccCCCCcc-----ccccChHHhcCCCCccC
Confidence 456788899999999999999999999999999 99999 9999998621 12456677888877765
No 289
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.00 E-value=2.2 Score=38.25 Aligned_cols=115 Identities=12% Similarity=0.146 Sum_probs=75.8
Q ss_pred CCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCceeecCCCC
Q 011995 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT-FLHEEGPFQAMYNEFST 312 (473)
Q Consensus 234 ~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-yLH~~~~~~ivHrDlkp 312 (473)
.||++ .. .+..++ +.+.+.|+.-+++-=...+. .++...+++++.+|+.... +++. -+|--|.|
T Consensus 48 ~~~~f-~~-~I~~~e--D~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI-VR-DIDVSE--DEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS-EE-EEEECS--SEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC-Ce-EEEEeC--CEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 67777 33 233333 67777776543432233332 3678899999999887766 5554 57888999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
+||+++.++.++|.-.|+-..++... +..|.+ +-.+=|++..++.++..|.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~lpP~e----------~~ee~f----------l~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESLPPDE----------WDDERL----------LREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTBSSCS----------CCHHHH----------HHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccCCCCC----------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 99999999999999988754432211 233433 3356678888888877664
No 290
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=83.42 E-value=0.63 Score=39.79 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=39.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.++.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+-.|..
T Consensus 28 ~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~---Ls~N~-l~~l~~~~ 73 (170)
T 3g39_A 28 IPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLD---LDNNQ-LTVLPAGV 73 (170)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEE---CCSSC-CCCCCTTT
T ss_pred CCCCCcEEEcCCCcCCccChhhhcCcccCCEEE---CCCCC-cCccChhh
Confidence 357788899999999999999999999999999 99999 77554443
No 291
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=81.86 E-value=0.79 Score=39.41 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=38.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.++.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +++-.+
T Consensus 31 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~i~~ 74 (174)
T 2r9u_A 31 IPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLY---FNSNK-LTAIPT 74 (174)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCT
T ss_pred cCCCCcEEEeCCCCccccCHHHhcCCcCCCEEE---CCCCC-CCccCh
Confidence 357788899999999999999999999999999 99999 776433
No 292
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=81.55 E-value=0.33 Score=42.53 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=20.4
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|
T Consensus 56 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~ 95 (192)
T 1w8a_A 56 LVKLELKRNQLTGIEPNAFEGASHIQELQ---LGENK-IKEISN 95 (192)
T ss_dssp CCEEECCSSCCCCBCTTTTTTCTTCCEEE---CCSCC-CCEECS
T ss_pred CCEEECCCCCCCCcCHhHcCCcccCCEEE---CCCCc-CCccCH
Confidence 44444555555555555555555555555 55555 444433
No 293
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=80.50 E-value=0.58 Score=40.03 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+-.|..
T Consensus 54 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~---L~~N~-l~~~~~~~ 97 (170)
T 3g39_A 54 TQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS---LNDNQ-LKSIPRGA 97 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCTTT
T ss_pred ccCCEEECCCCCcCccChhhccCCCCCCEEE---CCCCc-cCEeCHHH
Confidence 3456677888888888888888888888888 88888 76655543
No 294
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=80.29 E-value=0.58 Score=44.94 Aligned_cols=41 Identities=17% Similarity=0.072 Sum_probs=19.3
Q ss_pred CCCCCCCC-CCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 33 LPEPQIPT-RSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 33 ~~~~~~~~-~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
|.++.+.+ |.|++.+|..|..++.|+.|+ |++|+ +++..|.
T Consensus 33 L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~---l~~N~-l~~~~~~ 74 (347)
T 2ifg_A 33 LTELYIENQQHLQHLELRDLRGLGELRNLT---IVKSG-LRFVAPD 74 (347)
T ss_dssp CSEEECCSCSSCCEECGGGSCSCCCCSEEE---CCSSC-CCEECTT
T ss_pred eeEEEccCCCCCCCcChhHhccccCCCEEE---CCCCc-cceeCHH
Confidence 33344443 455555444444455555555 55554 4444443
No 295
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=78.63 E-value=0.73 Score=39.61 Aligned_cols=43 Identities=9% Similarity=0.137 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|..+.+..|.|++.++..+..++.|+.|+ |++|+ +.+-.+.
T Consensus 57 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~---L~~N~-l~~l~~~ 99 (174)
T 2r9u_A 57 VNLQQLYFNSNKLTAIPTGVFDKLTQLTQLD---LNDNH-LKSIPRG 99 (174)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCTT
T ss_pred cCCCEEECCCCCCCccChhHhCCcchhhEEE---CCCCc-cceeCHH
Confidence 4566678889999998888888889999999 99998 6654443
No 296
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=77.66 E-value=0.65 Score=41.60 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=29.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
+.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..+
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~~ 125 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLKTLM---LRSNR-ITCVGNDSF 125 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCCEEE---CTTSC-CCCBCTTSS
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCCEEE---CCCCc-CCeECHhHc
Confidence 3455566777777777777667777777777 77777 665555543
No 297
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=75.05 E-value=0.9 Score=43.55 Aligned_cols=43 Identities=14% Similarity=-0.031 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|..+.+..|.|+|.+|..|..++.|+.|+ |++|+ +++-.|.
T Consensus 56 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~---l~~N~-l~~~~~~ 98 (347)
T 2ifg_A 56 GELRNLTIVKSGLRFVAPDAFHFTPRLSRLN---LSFNA-LESLSWK 98 (347)
T ss_dssp CCCSEEECCSSCCCEECTTGGGSCSCCCEEE---CCSSC-CSCCCST
T ss_pred cCCCEEECCCCccceeCHHHhcCCcCCCEEe---CCCCc-cceeCHH
Confidence 4577788999999999999999999999999 99999 7754443
No 298
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=74.60 E-value=1.1 Score=39.10 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=47.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCc-ccccCCcccccCccccccccccccCCCChhhhhhhhhhhccchhhhhhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPS-FRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQE 98 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 98 (473)
.+..+.++.+..|.|++.+|+ .+..++.|+.|+ |++|+ +.+..|..+..- ..+..+.+.+|.
T Consensus 27 ~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 27 IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLE---LKRNQ-LTGIEPNAFEGA----SHIQELQLGENK 89 (192)
T ss_dssp CCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEE---CCSSC-CCCBCTTTTTTC----TTCCEEECCSCC
T ss_pred CCCCCCEEECCCCcCCccCCccccccCCCCCEEE---CCCCC-CCCcCHhHcCCc----ccCCEEECCCCc
Confidence 345788899999999999886 589999999999 99999 888888765432 134455555543
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=73.45 E-value=1.6 Score=41.69 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
|.++.+..|++.|.+|..+..++.|+.|+ |++|+ ..+.+|..
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~---L~~n~-~~~~~p~~ 272 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLI---LKDCS-NLLTLPLD 272 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEE---CTTCT-TCCBCCTT
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEE---CCCCC-chhhcchh
Confidence 44445555555555555555555555555 55555 55555544
No 300
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=72.31 E-value=1.2 Score=38.93 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.|..+.+..|.|++.+|..|..++.|+.|+ |++|+ +++-.|..
T Consensus 55 ~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~---Ls~N~-l~~i~~~~ 97 (193)
T 2wfh_A 55 HLTLIDLSNNRISTLSNQSFSNMTQLLTLI---LSYNR-LRCIPPRT 97 (193)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCBCCTTT
T ss_pred CCCEEECCCCcCCEeCHhHccCCCCCCEEE---CCCCc-cCEeCHHH
Confidence 344556666777766666666666677666 66666 55555443
No 301
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=71.94 E-value=1.2 Score=39.67 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
|..+.+..|.|++.++..+..++.|+.|+ |++|+ +.+..|
T Consensus 82 L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~---L~~N~-l~~~~~ 121 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSLFEGLFSLQLLL---LNANK-INCLRV 121 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCT
T ss_pred CCEEECCCCcCCccCHhHccCCCCCCEEE---CCCCC-CCEeCH
Confidence 33344444455544444444444444444 44444 443333
No 302
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=70.96 E-value=2.1 Score=37.36 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=39.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|..|.++.+..|.|+ .+|..+..++.|+.|+ |++|+ ..+-.|....
T Consensus 29 ~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~---Ls~N~-i~~i~~~~f~ 75 (193)
T 2wfh_A 29 IPRDVTELYLDGNQFT-LVPKELSNYKHLTLID---LSNNR-ISTLSNQSFS 75 (193)
T ss_dssp CCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEE---CCSSC-CCCCCTTTTT
T ss_pred CCCCCCEEECCCCcCc-hhHHHhhcccCCCEEE---CCCCc-CCEeCHhHcc
Confidence 4567888999999998 6778899999999999 99999 7776665543
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=70.64 E-value=1.3 Score=45.95 Aligned_cols=42 Identities=10% Similarity=-0.014 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
|.++.+..|.|++.+|..+..++.|+.|+ |++|+ +++..|+.
T Consensus 520 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~ 561 (635)
T 4g8a_A 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLD---YSLNH-IMTSKKQE 561 (635)
T ss_dssp CCEEECTTSCCCBCCCGGGTTCTTCCEEE---CTTSC-CCBCCSSC
T ss_pred CCEEECCCCcCCCCChhHHhCCCCCCEEE---CCCCc-CCCCCHHH
Confidence 44444555555555555555555555555 55555 55555444
No 304
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=70.35 E-value=1.8 Score=38.56 Aligned_cols=60 Identities=8% Similarity=0.049 Sum_probs=45.0
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhhhhhhhhhccchhhhhhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQE 98 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 98 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..+..- ..+..+.+.+|.
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~ 116 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEIL---LTSNR-LENVQHKMFKGL----ESLKTLMLRSNR 116 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEE---CCSSC-CCCCCGGGGTTC----SSCCEEECTTSC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEE---CCCCc-cCccCHhHhcCC----cCCCEEECCCCc
Confidence 4577788999999999999999999999999 99999 777666544321 134455555553
No 305
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=68.88 E-value=2.2 Score=34.79 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
-|+.|..+.+..|.|+...+..|..++.|+.|+ |++|-
T Consensus 29 lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~---L~~NP 66 (130)
T 3rfe_A 29 FPVDTTELVLTGNNLTALPPGLLDALPALRTAH---LGANP 66 (130)
T ss_dssp CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEE---CCSSC
T ss_pred CCcCCCEEECCCCcCCccChhhhhhccccCEEE---ecCCC
Confidence 566677899999999999999999999999999 99987
No 306
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=68.77 E-value=1.3 Score=41.88 Aligned_cols=47 Identities=21% Similarity=0.264 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDA 81 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~ 81 (473)
+.|.++.+..|.|+|.+|..+.+++.|+.|+ |++|+ ..+.+|..+..
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~---Ls~N~-l~~~~p~~~~~ 147 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLD---FSYNA-LSGTLPPSISS 147 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGCTTCCEEE---CCSSE-EESCCCGGGGG
T ss_pred CCCCEEECcCCeeCCcCCHHHhCCCCCCEEe---CCCCc-cCCcCChHHhc
Confidence 3466677778888888888888888888888 88888 78778876543
No 307
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=66.86 E-value=3.4 Score=35.06 Aligned_cols=45 Identities=13% Similarity=0.202 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.++.|..+.+..|.|++.+++.+..++.|+.|+ |++|+ +.+-.+.
T Consensus 26 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~~ 70 (177)
T 2o6r_A 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLS---LSQNQ-IQSLPDG 70 (177)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEE---CCSSC-CCCCCTT
T ss_pred CCCCCcEEEeCCCcccEeCHHHhcCcccccEEE---CCCCc-ceEeChh
Confidence 456888899999999999998899999999999 99999 6654443
No 308
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.39 E-value=1.5 Score=44.21 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=14.1
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEE----EEEecCC---CChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEA----TVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
.+.|| ||.||+|.+..... .+++ ..+.... .......+.+|..++..++|+|+++.++|..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~---~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHM---PVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------C---CBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCC---chhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 35665 99999999864311 1111 1122221 2233456888999999999999999998764
No 309
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=66.05 E-value=2.1 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=15.8
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
|..+.+..|.|++.++..+..++.|+.|+ |++|+
T Consensus 109 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---Ls~N~ 142 (251)
T 3m19_A 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELR---LNTNQ 142 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC
T ss_pred CCEEEcCCCcCCCcChhHhccCCcccEEE---CcCCc
Confidence 33344444444444444444444444444 44444
No 310
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=65.48 E-value=0.65 Score=46.78 Aligned_cols=52 Identities=21% Similarity=0.187 Sum_probs=20.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhh
Q 011995 25 PQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDA 81 (473)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~ 81 (473)
+.-..-+.|.++.++.|.| |.+|..+.+++.|+.|+ +++|+ +.|.+|++...
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~---l~~n~-~~~~~p~~~~~ 56 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYY---NAWSE-WERNAPPGNGE 56 (454)
T ss_dssp ------------------------------CCHHHHH---HHHHH-HHHTSCTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhh---ccCCc-ccccCCccccc
Confidence 4445568899999999999 99999999999999999 99999 99999987543
No 311
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=65.18 E-value=2.3 Score=37.81 Aligned_cols=48 Identities=21% Similarity=0.346 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..+.
T Consensus 30 l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~---Ls~N~-i~~~~~~~~~ 77 (220)
T 2v9t_B 30 LPETITEIRLEQNTIKVIPPGAFSPYKKLRRID---LSNNQ-ISELAPDAFQ 77 (220)
T ss_dssp CCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE---CCSSC-CCEECTTTTT
T ss_pred cCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEE---CCCCc-CCCcCHHHhh
Confidence 456788899999999999998999999999999 99999 7777676644
No 312
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=65.07 E-value=3.7 Score=36.72 Aligned_cols=42 Identities=10% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc
Q 011995 28 HTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL 73 (473)
Q Consensus 28 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~ 73 (473)
..|+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +..
T Consensus 37 ~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~---L~~N~-l~~ 78 (229)
T 3e6j_A 37 GIPTNAQILYLHDNQITKLEPGVFDSLINLKELY---LGSNQ-LGA 78 (229)
T ss_dssp CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCC
T ss_pred CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEE---CCCCC-CCC
Confidence 3457788899999999999999999999999999 99999 643
No 313
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=63.55 E-value=3.4 Score=35.03 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|..+.+..|.|++.++..+..++.|+.|+ |++|+ +++..+.
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~---l~~N~-l~~~~~~ 94 (177)
T 2o6r_A 52 TQLTKLSLSQNQIQSLPDGVFDKLTKLTILY---LHENK-LQSLPNG 94 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCTT
T ss_pred ccccEEECCCCcceEeChhHccCCCccCEEE---CCCCC-ccccCHH
Confidence 5577788899999999998889999999999 99999 7655444
No 314
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=63.04 E-value=4.2 Score=36.75 Aligned_cols=47 Identities=9% Similarity=0.089 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
.|+.+..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..+
T Consensus 33 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~~~~ 79 (251)
T 3m19_A 33 IPADTEKLDLQSTGLATLSDATFRGLTKLTWLN---LDYNQ-LQTLSAGVF 79 (251)
T ss_dssp CCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE---CTTSC-CCCCCTTTT
T ss_pred CCCCCCEEEccCCCcCccCHhHhcCcccCCEEE---CCCCc-CCccCHhHh
Confidence 456777889999999999999999999999999 99999 777666543
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=62.53 E-value=3.7 Score=39.03 Aligned_cols=43 Identities=9% Similarity=0.040 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
.|.++.+..|.|++. |..+..++.|+.|+ |++|+ ..+.+|...
T Consensus 207 ~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~---Ls~n~-~~~~~p~~~ 249 (328)
T 4fcg_A 207 NLKSLKIRNSPLSAL-GPAIHHLPKLEELD---LRGCT-ALRNYPPIF 249 (328)
T ss_dssp TCCEEEEESSCCCCC-CGGGGGCTTCCEEE---CTTCT-TCCBCCCCT
T ss_pred CCCEEEccCCCCCcC-chhhccCCCCCEEE---CcCCc-chhhhHHHh
Confidence 455566667777753 33466677777777 77777 666666653
No 316
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=62.25 E-value=2.9 Score=35.12 Aligned_cols=46 Identities=9% Similarity=0.034 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCcccccCCcccccCccccccccccccC
Q 011995 25 PQEHTPTTLPEPQIPTRSLQ-SAPPSFRTRVKPIPLNNTTKATNNRTRALS 74 (473)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~l~-~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~ 74 (473)
.....|+.|..+.+..|.|+ |.+|..+..++.|+.|+ |++|+ +.+.
T Consensus 18 ~~~~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~---l~~n~-l~~~ 64 (168)
T 2ell_A 18 LRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLS---LINVG-LISV 64 (168)
T ss_dssp HTTSCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEE---EESSC-CCCC
T ss_pred hccCCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEe---CcCCC-CCCh
Confidence 34556788999999999998 89999889999999999 99998 5543
No 317
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=61.97 E-value=3.9 Score=36.52 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|.|++.+++.+..++.|+.|+ |++|+ +.+-.+..
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~---Ls~N~-l~~l~~~~ 107 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLD---LGTNQ-LTVLPSAV 107 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCTTT
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEE---CCCCc-CCccChhH
Confidence 4566677788888777777777888888888 88887 66544443
No 318
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=58.71 E-value=3.4 Score=37.99 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.|..+.+..|.|++.+|..+..++.|+.|+ +++|+ +.+..|
T Consensus 134 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~ 174 (272)
T 3rfs_A 134 NLTYLNLAHNQLQSLPKGVFDKLTNLTELD---LSYNQ-LQSLPE 174 (272)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCT
T ss_pred CCCEEECCCCccCccCHHHhccCccCCEEE---CCCCC-cCccCH
Confidence 344445555555555555555555555555 55555 443333
No 319
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=58.38 E-value=4.7 Score=36.97 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=30.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..
T Consensus 157 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~---L~~N~-l~~~~~~~ 200 (272)
T 3rfs_A 157 TNLTELDLSYNQLQSLPEGVFDKLTQLKDLR---LYQNQ-LKSVPDGV 200 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CSCCCTTT
T ss_pred ccCCEEECCCCCcCccCHHHhcCCccCCEEE---CCCCc-CCccCHHH
Confidence 4566666777777777777777777777777 77777 66655543
No 320
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=58.14 E-value=3.1 Score=43.03 Aligned_cols=46 Identities=4% Similarity=-0.038 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
-|+.+..+.+..|.|++-+|..|.+++.|+.|| |++|+ .++-.|+.
T Consensus 50 lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~---Ls~N~-i~~i~~~~ 95 (635)
T 4g8a_A 50 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLD---LSRCE-IQTIEDGA 95 (635)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE---CTTCC-CCEECTTT
T ss_pred CCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEE---CCCCc-CCCcChhH
Confidence 356667799999999999998899999999999 99998 76655554
No 321
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=58.04 E-value=3.9 Score=42.33 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=16.2
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
|..+.+..|.|+ .+|..+..++.|+.|+ |++|+
T Consensus 465 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~---Ls~N~ 497 (567)
T 1dce_A 465 VTHLDLSHNRLR-ALPPALAALRCLEVLQ---ASDNA 497 (567)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEE---CCSSC
T ss_pred CcEeecCccccc-ccchhhhcCCCCCEEE---CCCCC
Confidence 334444455555 4444455555555555 55554
No 322
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=55.97 E-value=5.7 Score=34.60 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|.++.+..|.|++.++..+..++.|+.|+ |++|+ +.+..+.
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~ 94 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN---LSTNQ-LQSLPNG 94 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CCCCCTT
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEE---CCCCc-CCccCHh
Confidence 4566677888888888887788888888888 88888 6654443
No 323
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=55.96 E-value=3.8 Score=33.50 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=27.9
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCcccccCCcccccCcccccccc
Q 011995 28 HTPTTLPEPQIPTRSLQ-SAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 28 ~~~~~~~~~~~~~~~l~-~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
..++.+..+.+..|.++ |.+|..+..++.|+.|+ +++|+
T Consensus 14 ~~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~---l~~n~ 53 (149)
T 2je0_A 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLS---TINVG 53 (149)
T ss_dssp CCGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEE---CTTSC
T ss_pred CCCccCeEEEccCCcCChhHHHHHHhhcCCCcEEE---CcCCC
Confidence 34566777777777777 67777777777777777 77776
No 324
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=54.56 E-value=7.1 Score=33.92 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=37.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.++.|.++.+..|.|++.++..+..++.|+.|+ +++|+ +..-.+
T Consensus 26 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~ 69 (208)
T 2o6s_A 26 IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLY---LGGNK-LQSLPN 69 (208)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEE---CCSSC-CCCCCT
T ss_pred CCCCCcEEEcCCCccCcCChhhhcccccCcEEE---CCCCc-cCccCh
Confidence 456788899999999999999899999999999 99999 664433
No 325
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=52.93 E-value=3.9 Score=40.93 Aligned_cols=34 Identities=12% Similarity=-0.014 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL 73 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~ 73 (473)
.|..+.+..|.|++ +|. .++.|+.|+ +++|+ +.+
T Consensus 338 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~---L~~N~-l~~ 371 (454)
T 1jl5_A 338 RLERLIASFNHLAE-VPE---LPQNLKQLH---VEYNP-LRE 371 (454)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEE---CCSSC-CSS
T ss_pred cCCEEECCCCcccc-ccc---hhhhccEEE---CCCCC-CCc
Confidence 34444445555553 333 234444555 55555 444
No 326
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=52.89 E-value=3.1 Score=38.55 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=33.4
Q ss_pred CCCCCCCCCCCCCC--CCCcccccCCcccccCccccccccccccC
Q 011995 32 TLPEPQIPTRSLQS--APPSFRTRVKPIPLNNTTKATNNRTRALS 74 (473)
Q Consensus 32 ~~~~~~~~~~~l~~--~~p~~~~~~~~~~~~~~~~ls~n~~~~~~ 74 (473)
.|..+.+..|.|++ .+|..+..++.|+.|| ||+|+ ..+.
T Consensus 171 ~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~---Ls~N~-i~~~ 211 (267)
T 3rw6_A 171 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN---LSGNE-LKSE 211 (267)
T ss_dssp TCCEEECTTSCCCCCGGGTTHHHHSTTCCEEE---CTTSC-CCSG
T ss_pred CCCEEECCCCCCCCCccchhHHhhCCCCCEEE---CCCCc-cCCc
Confidence 57788999999999 7788888999999999 99999 5543
No 327
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=52.27 E-value=8.5 Score=41.11 Aligned_cols=43 Identities=21% Similarity=0.252 Sum_probs=27.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
+.|..+.+..|.|+ .+|..+.+++.|+.|+ |++|+ ++ .+|.++
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~---Ls~N~-l~-~lp~~~ 289 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLD---LSHNR-LT-SLPAEL 289 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEE---CTTSC-CS-SCCSSG
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEe---CcCCc-CC-ccChhh
Confidence 44666667777777 6666666777777777 77776 55 556553
No 328
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=51.93 E-value=16 Score=34.37 Aligned_cols=47 Identities=19% Similarity=0.140 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
++.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..|..+.
T Consensus 192 ~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~---L~~N~-l~~~~~~~~~ 238 (332)
T 2ft3_A 192 PETLNELHLDHNKIQAIELEDLLRYSKLYRLG---LGHNQ-IRMIENGSLS 238 (332)
T ss_dssp CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCB---CCSSC-CCCCCTTGGG
T ss_pred cCCCCEEECCCCcCCccCHHHhcCCCCCCEEE---CCCCc-CCcCChhHhh
Confidence 35788888888999998888888899999999 99998 7776665543
No 329
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=50.64 E-value=4.2 Score=42.64 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCCCC-----------------CCcccc--cCCcccccCccccccccccccCCCChhh
Q 011995 31 TTLPEPQIPTRSLQSA-----------------PPSFRT--RVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~-----------------~p~~~~--~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
+.|..+.+..|.|+|. +|..+. +++.|+.|+ |++|+ +.|.+|+++.
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~---L~~n~-l~~~~p~~l~ 270 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE---VYNCP-NLTKLPTFLK 270 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE---EECCT-TCSSCCTTTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE---ecCCc-CCccChHHHh
Confidence 3566677888888886 888888 888888888 88888 8888887654
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=49.34 E-value=9 Score=35.77 Aligned_cols=43 Identities=5% Similarity=0.018 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCCCCCc---ccccCCcccccCccccccccccccCCCCh
Q 011995 32 TLPEPQIPTRSLQSAPPS---FRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~---~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.|.++.+..|.|++..+. .+..++.|+.|+ ||+|+ +.+.+|..
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~---Ls~N~-l~~~~p~~ 243 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLD---LSHNS-LRATVNPS 243 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEE---CTTSC-CCCCCCSC
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEE---CCCCC-CCccchhh
Confidence 455666666666532211 234556666666 66666 56555544
No 331
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=49.29 E-value=3.5 Score=33.77 Aligned_cols=42 Identities=12% Similarity=-0.011 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|.|++. ..+..++.|+.|+ |++|+ ..+.+|..
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~---Ls~n~-i~~~~~~~ 83 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLE---LSDNR-VSGGLEVL 83 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEE---CCSSC-CCSCTHHH
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEE---CCCCc-ccchHHHH
Confidence 3455566667777666 4566677777777 77777 55555543
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=49.13 E-value=5.6 Score=37.01 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=16.8
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
|.++.+..|.|++.+|..+..++.|+.|+ |++|+
T Consensus 126 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---L~~N~ 159 (290)
T 1p9a_G 126 LQELYLKGNELKTLPPGLLTPTPKLEKLS---LANNN 159 (290)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEE---CTTSC
T ss_pred CCEEECCCCCCCccChhhcccccCCCEEE---CCCCc
Confidence 33444455555555554444455555555 55554
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=49.07 E-value=8.7 Score=36.11 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.++.+..+.+..|.|++.++..+.+++.|+.|+ |++|+ ..+..|....
T Consensus 50 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~~~~~ 97 (330)
T 1xku_A 50 LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLI---LINNK-ISKISPGAFA 97 (330)
T ss_dssp CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE---CCSSC-CCCBCTTTTT
T ss_pred CCCCCeEEECCCCcCCEeChhhhccCCCCCEEE---CCCCc-CCeeCHHHhc
Confidence 356677789999999999998999999999999 99999 7777776644
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=48.02 E-value=8.8 Score=35.63 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.+.|..+.+..|.|+ .+|..+..++.|+.|+ |++|+ +.+-.|.
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~---l~~N~-l~~l~~~ 118 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD---VSFNR-LTSLPLG 118 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE---CCSSC-CCCCCSS
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEE---CCCCc-CcccCHH
Confidence 344555666666665 4455555666666666 66666 5544433
No 335
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=48.00 E-value=3 Score=43.82 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc-CCCChhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL-SAPSSLD 80 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~-~~p~~~~ 80 (473)
+.|..+.+..|.+.|.+|..+.+++.|+.|+ |++|+.++| .+|.+..
T Consensus 249 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~---Ls~n~~l~~~~lp~~~~ 296 (636)
T 4eco_A 249 KDLTDVEVYNCPNLTKLPTFLKALPEMQLIN---VACNRGISGEQLKDDWQ 296 (636)
T ss_dssp TTCCEEEEECCTTCSSCCTTTTTCSSCCEEE---CTTCTTSCHHHHHHHHH
T ss_pred CCCCEEEecCCcCCccChHHHhcCCCCCEEE---CcCCCCCccccchHHHH
Confidence 4566788889999999999999999999999 999975677 7777644
No 336
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=47.59 E-value=7.4 Score=40.22 Aligned_cols=58 Identities=17% Similarity=0.080 Sum_probs=40.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCC-CChhhhhhhhhhhccchhhhhhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSA-PSSLDAAEAEQDALASVEFEEQE 98 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~ 98 (473)
+.|..+.+..|.|++ +| .+..++.|+.|+ |++|+ +++.. |..+..-. .+..+.+.+|.
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~---Ls~N~-l~~~~~p~~l~~l~----~L~~L~L~~N~ 544 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELL---LCNNR-LQQSAAIQPLVSCP----RLVLLNLQGNS 544 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEE---CCSSC-CCSSSTTGGGGGCT----TCCEEECTTSG
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEE---CCCCC-CCCCCCcHHHhcCC----CCCEEEecCCc
Confidence 345567788888888 66 678888888888 88888 77776 77655421 34555555554
No 337
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=47.32 E-value=5.5 Score=40.49 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|.++.+..|.|+ .+|. ...++.|+.|+ |++|+ +++..|+
T Consensus 452 ~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~---Ls~N~-l~~~~~~ 491 (549)
T 2z81_A 452 RLQELYISRNKLK-TLPD-ASLFPVLLVMK---ISRNQ-LKSVPDG 491 (549)
T ss_dssp TCCEEECCSSCCS-SCCC-GGGCTTCCEEE---CCSSC-CCCCCTT
T ss_pred hhcEEECCCCccC-cCCC-cccCccCCEEe---cCCCc-cCCcCHH
Confidence 3444445555555 3343 23445555555 55555 4444444
No 338
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=46.65 E-value=6.9 Score=35.73 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=24.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
+.|..+.+..|.|++.++..+..++.|+.|+ |++|+ .....+
T Consensus 133 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~ 174 (270)
T 2o6q_A 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELR---LYNNQ-LKRVPE 174 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CSCCCT
T ss_pred cCCCEEECCCCcCCccCHhHccCCcccceeE---ecCCc-CcEeCh
Confidence 4455555666666666666566666666666 66666 444333
No 339
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=46.37 E-value=7 Score=38.80 Aligned_cols=48 Identities=6% Similarity=0.038 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|+.+..+.+..|+|++.+|..+.+++.|+.|+ |++|+ ..+-.|..+.
T Consensus 73 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~---Ls~n~-i~~~~~~~~~ 120 (452)
T 3zyi_A 73 IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQ---LGRNS-IRQIEVGAFN 120 (452)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEE---CCSSC-CCEECTTTTT
T ss_pred CCCCccEEECcCCcCceECHHHcCCCCCCCEEE---CCCCc-cCCcChhhcc
Confidence 456777889999999999999999999999999 99998 7766665543
No 340
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=46.02 E-value=5.1 Score=41.40 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=19.8
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
|.++.+..|.|++.+|+.+..++.| .+| |++|+ +.+..|+
T Consensus 502 L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~---L~~N~-l~~~~~~ 541 (606)
T 3t6q_A 502 MNHVDLSHNRLTSSSIEALSHLKGI-YLN---LASNH-ISIILPS 541 (606)
T ss_dssp CCEEECCSSCCCGGGGGGGTTCCSC-EEE---CCSSC-CCCCCGG
T ss_pred CCEEECCCCccCcCChhHhCccccc-EEE---CcCCc-ccccCHh
Confidence 3344445555555555555555555 555 55555 4444443
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=45.92 E-value=4.2 Score=38.94 Aligned_cols=45 Identities=9% Similarity=-0.027 Sum_probs=38.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|+.+.++.+..|.|+.-++..|..++.|+.|+ |++|+ ..+.+|.
T Consensus 28 l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~---Ls~N~-i~~~i~~ 72 (350)
T 4ay9_X 28 LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIE---ISQND-VLEVIEA 72 (350)
T ss_dssp CCTTCSEEEEESCCCSEECTTSSTTCTTCCEEE---EECCT-TCCEECT
T ss_pred cCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEE---CcCCC-CCCccCh
Confidence 356778899999999988888899999999999 99999 5555554
No 342
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=45.41 E-value=6.7 Score=36.02 Aligned_cols=48 Identities=8% Similarity=0.068 Sum_probs=41.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|+.|..+.+..|.|++.++..+.+++.|+.|+ |++|+ ..+..|..+.
T Consensus 30 ~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~---l~~n~-l~~~~~~~~~ 77 (285)
T 1ozn_A 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILW---LHSNV-LARIDAAAFT 77 (285)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEE---CCSSC-CCEECTTTTT
T ss_pred CCCCceEEEeeCCcCCccCHHHcccCCCCCEEE---CCCCc-cceeCHhhcC
Confidence 467888899999999999999999999999999 99998 7776666543
No 343
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=45.40 E-value=9.1 Score=35.48 Aligned_cols=45 Identities=11% Similarity=0.064 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.+.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..+..
T Consensus 174 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---L~~N~-l~~~~~~~ 218 (306)
T 2z66_A 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN---MSHNN-FFSLDTFP 218 (306)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE---CTTSC-CSBCCSGG
T ss_pred CcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE---CCCCc-cCccChhh
Confidence 34677778888888888888888888888888 88888 66554433
No 344
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=45.15 E-value=9.4 Score=37.64 Aligned_cols=39 Identities=5% Similarity=-0.067 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL 73 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~ 73 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+
T Consensus 347 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---L~~N~-l~~ 385 (455)
T 3v47_A 347 DKLEVLDLSYNHIRALGDQSFLGLPNLKELA---LDTNQ-LKS 385 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEE---CCSSC-CSC
T ss_pred ccCCEEECCCCcccccChhhccccccccEEE---CCCCc-ccc
Confidence 4455556666666666666666666666666 66666 444
No 345
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=44.76 E-value=17 Score=34.18 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +. .+|..+.
T Consensus 217 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---L~~N~-l~-~lp~~l~ 261 (332)
T 2ft3_A 217 SKLYRLGLGHNQIRMIENGSLSFLPTLRELH---LDNNK-LS-RVPAGLP 261 (332)
T ss_dssp TTCSCCBCCSSCCCCCCTTGGGGCTTCCEEE---CCSSC-CC-BCCTTGG
T ss_pred CCCCEEECCCCcCCcCChhHhhCCCCCCEEE---CCCCc-Ce-ecChhhh
Confidence 5677889999999999999999999999999 99999 66 6777643
No 346
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=43.74 E-value=5.8 Score=37.19 Aligned_cols=45 Identities=16% Similarity=0.080 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCCCCCCCccc--ccCCcccccCccccccccccccCCCChh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFR--TRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~--~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
-+.|.++.+..|.|+|.+|..+ ..++.|+.|+ |++|+ +.+. |...
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~-~~~~ 140 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILN---LRNVS-WATR-DAWL 140 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEE---EESCB-CSSS-SSHH
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEE---ccCCC-Ccch-hHHH
Confidence 3567788888999999888865 8889999999 99998 7766 6543
No 347
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=43.64 E-value=5.9 Score=43.39 Aligned_cols=47 Identities=13% Similarity=-0.017 Sum_probs=37.1
Q ss_pred CCCCCCCCCCCCCCC-----------------CCCcccc--cCCcccccCccccccccccccCCCChhhh
Q 011995 31 TTLPEPQIPTRSLQS-----------------APPSFRT--RVKPIPLNNTTKATNNRTRALSAPSSLDA 81 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~-----------------~~p~~~~--~~~~~~~~~~~~ls~n~~~~~~~p~~~~~ 81 (473)
+.|..+.+..|.|+| .+|+.+. +++.|+.|+ |++|+ +.+.+|.++..
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~---Ls~N~-l~~~iP~~l~~ 513 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE---LYNCP-NMTQLPDFLYD 513 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE---EESCT-TCCSCCGGGGG
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE---CcCCC-CCccChHHHhC
Confidence 356667788888988 4888877 899999999 99998 88888876543
No 348
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=43.07 E-value=5.2 Score=40.45 Aligned_cols=44 Identities=11% Similarity=0.044 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.++.|..+.+..|.|++.+|..+..++.|+.|| |++|+ +.+..|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~ 75 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLN---LSSNV-LYETLD 75 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEE---CTTSC-CEEEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEE---eeCCC-CCCCcc
Confidence 455788899999999999999999999999999 99999 666554
No 349
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=42.79 E-value=10 Score=38.76 Aligned_cols=48 Identities=8% Similarity=-0.023 Sum_probs=40.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|+.|..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+-.|+...
T Consensus 50 ~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~~~ 97 (562)
T 3a79_B 50 LPPRTKALSLSQNSISELRMPDISFLSELRVLR---LSHNR-IRSLDFHVFL 97 (562)
T ss_dssp SCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEE---CCSCC-CCEECTTTTT
T ss_pred CCCCcCEEECCCCCccccChhhhccCCCccEEE---CCCCC-CCcCCHHHhC
Confidence 356788899999999999999999999999999 99999 8877776644
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=42.56 E-value=4.1 Score=35.30 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|..+.+..|.|++..|..+..++.|+.|+ |++|+ ..+..|.
T Consensus 88 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~---Ls~n~-i~~~~~~ 130 (197)
T 4ezg_A 88 SNLERLRIMGKDVTSDKIPNLSGLTSLTLLD---ISHSA-HDDSILT 130 (197)
T ss_dssp TTCCEEEEECTTCBGGGSCCCTTCTTCCEEE---CCSSB-CBGGGHH
T ss_pred CCCCEEEeECCccCcccChhhcCCCCCCEEE---ecCCc-cCcHhHH
Confidence 3455556666777776666677777777777 77777 5544443
No 351
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=42.41 E-value=4.8 Score=33.66 Aligned_cols=41 Identities=15% Similarity=-0.035 Sum_probs=26.0
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.|..+.+..|.|++. ..+..++.|+.|+ |++|+ ..+..|..
T Consensus 50 ~L~~L~l~~n~l~~~--~~~~~l~~L~~L~---Ls~N~-l~~~~~~~ 90 (168)
T 2ell_A 50 NLEFLSLINVGLISV--SNLPKLPKLKKLE---LSENR-IFGGLDML 90 (168)
T ss_dssp GCCEEEEESSCCCCC--SSCCCCSSCCEEE---EESCC-CCSCCCHH
T ss_pred CCCEEeCcCCCCCCh--hhhccCCCCCEEE---CcCCc-CchHHHHH
Confidence 345556666777665 5566677777777 77777 55555543
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=42.05 E-value=7.8 Score=37.22 Aligned_cols=45 Identities=9% Similarity=0.133 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCCCCCCCCCcccc-cCCcccccCccccccccccccCCCCh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRT-RVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~-~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
|..+..+.+..|.|++.++..+. .++.|+.|+ |++|+ +.+-.|..
T Consensus 38 ~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~---L~~N~-i~~i~~~~ 83 (361)
T 2xot_A 38 PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLL---LSHNH-LNFISSEA 83 (361)
T ss_dssp CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEE---CCSSC-CCEECTTT
T ss_pred CCCCCEEECCCCCCCccChhhhhhcccccCEEE---CCCCc-CCccChhh
Confidence 44455677777777777777666 777777777 77777 65555443
No 353
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=42.04 E-value=8.8 Score=38.23 Aligned_cols=49 Identities=8% Similarity=0.056 Sum_probs=40.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 28 HTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 28 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
..|+.+..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+..|..+.
T Consensus 29 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~---L~~n~-i~~~~~~~~~ 77 (477)
T 2id5_A 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE---LNENI-VSAVEPGAFN 77 (477)
T ss_dssp CCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEE---CTTSC-CCEECTTTTT
T ss_pred CCCCCCcEEECCCCccceECHhHccCCCCCCEEE---CCCCc-cCEeChhhhh
Confidence 3466778889999999999999999999999999 99998 7777676543
No 354
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=41.93 E-value=4.1 Score=44.61 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc-CCCChhh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL-SAPSSLD 80 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~-~~p~~~~ 80 (473)
+.|..+.+..|++.|.+|..+.+++.|+.|+ |++|+.++| .+|.+..
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~---Ls~N~~lsg~~iP~~i~ 538 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLN---IACNRGISAAQLKADWT 538 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEE---CTTCTTSCHHHHHHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEE---CcCCCCcccccchHHHH
Confidence 4566778889999999999999999999999 999975777 7777643
No 355
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=41.77 E-value=9.3 Score=34.84 Aligned_cols=46 Identities=4% Similarity=-0.038 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
-|+.|..+.+..|.|++.++..+.+++.|+.|+ |++|+ ...-.+..
T Consensus 26 l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~~~ 71 (276)
T 2z62_A 26 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLD---LSRCE-IQTIEDGA 71 (276)
T ss_dssp SCTTCCEEECTTCCCCEECTTTTTTCTTCSEEE---CTTCC-CCEECTTT
T ss_pred CCCCccEEECCCCcccccCHhHhccccCCcEEE---CCCCc-CCccCHHH
Confidence 466788899999999999998899999999999 99998 66544443
No 356
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=41.31 E-value=6.1 Score=39.09 Aligned_cols=35 Identities=11% Similarity=0.073 Sum_probs=18.5
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
.|.++.+..|.|++.+|..+..++.|+.|+ |++|+
T Consensus 208 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---L~~n~ 242 (440)
T 3zyj_A 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLW---MIQSQ 242 (440)
T ss_dssp SCCEEECTTSCCCEECTTTTTTCTTCCEEE---CTTCC
T ss_pred ccCEEECCCCccCccChhhhccCccCCEEE---CCCCc
Confidence 344455555555555555555555555555 55444
No 357
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=41.07 E-value=7.9 Score=36.23 Aligned_cols=35 Identities=9% Similarity=-0.057 Sum_probs=15.8
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
.|.++.+..|.|++.+|..+..++.|+.|+ |++|+
T Consensus 150 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---Ls~N~ 184 (312)
T 1wwl_A 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLD---LSDNP 184 (312)
T ss_dssp TCCEEEEESCSCCCCCTTTCCCCSSCCEEE---CCSCT
T ss_pred CCcEEEeeCCCCccchHHHhccCCCCCEEE---CCCCC
Confidence 344444444444444444444444444444 44444
No 358
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=41.04 E-value=12 Score=38.03 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=21.2
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.|.++.+..|.|++.+|..+..++.|+.|+ +++|+ +.+..|
T Consensus 471 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~ 511 (570)
T 2z63_A 471 NLTFLDLSQCQLEQLSPTAFNSLSSLQVLN---MASNQ-LKSVPD 511 (570)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEE---CCSSC-CSCCCT
T ss_pred CCCEEECCCCccccCChhhhhcccCCCEEe---CCCCc-CCCCCH
Confidence 344445555555555555555555555555 55555 444433
No 359
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=40.49 E-value=9.8 Score=39.19 Aligned_cols=48 Identities=8% Similarity=0.056 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|..+..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+..|....
T Consensus 31 l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~---Ls~n~-i~~~~~~~~~ 78 (606)
T 3t6q_A 31 LPNSTECLEFSFNVLPTIQNTTFSRLINLTFLD---LTRCQ-IYWIHEDTFQ 78 (606)
T ss_dssp SCTTCCEEECTTCCCSEECTTTSTTCTTCSEEE---CTTCC-CCEECTTTTT
T ss_pred CCCcCcEEEccCCccCcCChhHhccCccceEEE---CCCCc-cceeChhhcc
Confidence 455677788888999988888888888999998 88888 7776676543
No 360
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=39.98 E-value=7.3 Score=39.69 Aligned_cols=45 Identities=13% Similarity=0.250 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCC-CCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 31 TTLPEPQIPTRSLQ-SAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 31 ~~~~~~~~~~~~l~-~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
+.|..+.+..|.++ |.+|..+..++.|+.|+ +++|+ ..+..|..+
T Consensus 445 ~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~---l~~n~-l~~~~~~~~ 490 (570)
T 2z63_A 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLD---LSQCQ-LEQLSPTAF 490 (570)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEE---CTTSC-CCEECTTTT
T ss_pred CcCcEEECcCCcCccccchhhhhcccCCCEEE---CCCCc-cccCChhhh
Confidence 34555566666666 56666666666777776 77666 666555543
No 361
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=39.95 E-value=14 Score=33.83 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=29.6
Q ss_pred CCCCCCCCCCCC-CCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRS-LQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~-l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|. +++..|..+..++.|+.|+ +++|+ +.+..|..
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~~~~~~ 124 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH---LDRCG-LQELGPGL 124 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE---CTTSC-CCCCCTTT
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEE---CCCCc-CCEECHhH
Confidence 345566676665 6666677777777777777 77777 66555544
No 362
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=39.75 E-value=41 Score=35.49 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=33.3
Q ss_pred HHHHHHHHHHH--HHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 281 NTRVKIALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 281 ~~~~~i~~~i~--~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..+..++.++| +-+.|+=.- +|=.++||||+.+|.+.=+|||..
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhh
Confidence 45566666654 455666444 488899999999999999999976
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=39.27 E-value=11 Score=36.26 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=37.4
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
-+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +..-.+..
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~ 107 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD---LSSNH-LHTLDEFL 107 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEE---CCSSC-CCEECTTT
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEE---CCCCc-CCcCCHHH
Confidence 35677788999999999999999999999999 99999 66555543
No 364
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=39.13 E-value=14 Score=33.56 Aligned_cols=44 Identities=23% Similarity=0.236 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
...|.++.+..|.|++.++..+..++.|+.++ |++|+ +.+.-|.
T Consensus 199 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---l~~N~-~~c~c~~ 242 (276)
T 2z62_A 199 EIRLKELALDTNQLKSVPDGIFDRLTSLQKIW---LHTNP-WDCSCPR 242 (276)
T ss_dssp SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEE---CCSSC-BCCCTTT
T ss_pred CCcccEEECCCCceeecCHhHhcccccccEEE---ccCCc-ccccCCc
Confidence 34677788889999999888888999999999 99999 8876653
No 365
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=39.06 E-value=7.6 Score=40.07 Aligned_cols=43 Identities=5% Similarity=0.028 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCC-CCCcccccCCcccccCccccccccccccCCCCh
Q 011995 32 TLPEPQIPTRSLQS-APPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 32 ~~~~~~~~~~~l~~-~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.|..+.+..|.|++ .+|..+..++.|+.|+ |++|+ ..+..|..
T Consensus 449 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~~ 492 (606)
T 3vq2_A 449 SLNTLKMAGNSFKDNTLSNVFANTTNLTFLD---LSKCQ-LEQISWGV 492 (606)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEE---CTTSC-CCEECTTT
T ss_pred CCCEEECCCCcCCCcchHHhhccCCCCCEEE---CCCCc-CCccChhh
Confidence 44445555555555 2555555556666666 66655 55554443
No 366
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=38.95 E-value=7 Score=38.81 Aligned_cols=30 Identities=10% Similarity=0.048 Sum_probs=14.4
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNN 61 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 61 (473)
.|.++.+..|.|++.+|..+..++.|+.|+
T Consensus 219 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 219 GLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred cccEEECcCCcCcccCcccccCccCCCEEE
Confidence 344444555555555554444444444444
No 367
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=38.94 E-value=17 Score=32.95 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=35.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL 73 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~ 73 (473)
.|+.+..+.+..|.|++.++..+.+++.|+.|+ |++|+ +..
T Consensus 35 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~---l~~n~-l~~ 75 (270)
T 2o6q_A 35 IPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLY---LNDNK-LQT 75 (270)
T ss_dssp CCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEE---CCSSC-CSC
T ss_pred CCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEE---CCCCc-cCe
Confidence 456788899999999999998899999999999 99998 553
No 368
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=38.91 E-value=7.3 Score=39.31 Aligned_cols=47 Identities=11% Similarity=-0.030 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
++.|..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+..|+...
T Consensus 20 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~~~~ 66 (520)
T 2z7x_B 20 SQKTTILNISQNYISELWTSDILSLSKLRILI---ISHNR-IQYLDISVFK 66 (520)
T ss_dssp CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEE---CCSSC-CCEEEGGGGT
T ss_pred cccccEEECCCCcccccChhhccccccccEEe---cCCCc-cCCcChHHhh
Confidence 36677778888888888877778888888888 88887 6666565533
No 369
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=38.76 E-value=11 Score=38.19 Aligned_cols=46 Identities=2% Similarity=-0.049 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
++.|..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+..|+..
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-i~~~~~~~~ 70 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLI---LKSSR-INTIEGDAF 70 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEE---CTTSC-CCEECTTTT
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEE---CCCCC-cCccChhhc
Confidence 35666777777777777777777777777777 77777 665555443
No 370
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=38.51 E-value=11 Score=38.90 Aligned_cols=47 Identities=4% Similarity=-0.001 Sum_probs=35.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
.|+.+..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+-.|...
T Consensus 30 ~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~i~~~~~ 76 (606)
T 3vq2_A 30 IPSSTKNIDLSFNPLKILKSYSFSNFSELQWLD---LSRCE-IETIEDKAW 76 (606)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE---CTTCC-CCEECTTTT
T ss_pred CCCCcCEEECCCCCcCEeChhhccCCccCcEEe---CCCCc-ccccCHHHh
Confidence 456777788888888888887788888888888 88887 666656543
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=38.47 E-value=7 Score=41.77 Aligned_cols=42 Identities=10% Similarity=-0.118 Sum_probs=22.2
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
|.++.+..|.|+ .+|..+.+++.|+.|+ |++|+ +.+.+|+.+
T Consensus 295 L~~L~L~~N~l~-~lp~~~~~l~~L~~L~---L~~N~-l~~~~p~~~ 336 (727)
T 4b8c_D 295 LKYFYFFDNMVT-TLPWEFGNLCNLQFLG---VEGNP-LEKQFLKIL 336 (727)
T ss_dssp CSEEECCSSCCC-CCCSSTTSCTTCCCEE---CTTSC-CCSHHHHHH
T ss_pred CCEEECCCCCCC-ccChhhhcCCCccEEe---CCCCc-cCCCChHHH
Confidence 334445555554 4444455555566665 66665 555555443
No 372
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=38.37 E-value=9.4 Score=37.65 Aligned_cols=45 Identities=9% Similarity=0.137 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|+.|..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+.+|.
T Consensus 28 l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~---L~~n~-~~~~i~~ 72 (455)
T 3v47_A 28 LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLK---VEQQT-PGLVIRN 72 (455)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEE---CCCCS-TTCEECT
T ss_pred CCCccCEEEecCCccCcCChhHhccCccccEEE---CcCCc-ccceECc
Confidence 567788889999999999899899999999999 99988 6655543
No 373
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=37.20 E-value=16 Score=38.22 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLD 80 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~ 80 (473)
.|+.+..+.+..|.|++.+|..+.+++.|+.|+ |++|+ ..+..|....
T Consensus 23 ~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~~~~ 70 (680)
T 1ziw_A 23 LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLD---VGFNT-ISKLEPELCQ 70 (680)
T ss_dssp SCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEE---CCSSC-CCCCCTTHHH
T ss_pred cCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEE---CCCCc-cCccCHHHHh
Confidence 356788888888889988888888888888888 88888 7777776543
No 374
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=36.28 E-value=7.1 Score=33.02 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=27.3
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALS 74 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~ 74 (473)
.|..+.+..|.|++. ..+..++.|+.|+ |++|+ ..+-
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~---Ls~N~-l~~~ 79 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLL---VNNNR-ICRI 79 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEE---CCSSC-CCEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEE---CCCCc-cccc
Confidence 677777888888875 4577778888888 88888 6543
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=35.77 E-value=9.6 Score=32.87 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCCCCCc------ccccCCcccccCccccccccccccCCC
Q 011995 32 TLPEPQIPTRSLQSAPPS------FRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~------~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.+....+..+.|+|.+|. .+..++.|+.|+ |++|+ +.+ +|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~---ls~n~-l~~-l~ 64 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLA---LSTNN-IEK-IS 64 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEE---CSEEE-ESC-CC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEE---CCCCC-Ccc-cc
Confidence 566778889999999998 888999999999 99998 665 55
No 376
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=35.25 E-value=8.1 Score=40.47 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
|..+.+..|.|+ .+|..+..++.|+.|| |++|+ +++..|.
T Consensus 263 L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~---L~~N~-l~~~~~~ 302 (622)
T 3g06_A 263 LLSLSVYRNQLT-RLPESLIHLSSETTVN---LEGNP-LSERTLQ 302 (622)
T ss_dssp CCEEECCSSCCC-SCCGGGGGSCTTCEEE---CCSCC-CCHHHHH
T ss_pred CcEEeCCCCCCC-cCCHHHhhccccCEEE---ecCCC-CCCcCHH
Confidence 333444444444 3344444445555555 55554 4444333
No 377
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=34.70 E-value=8.4 Score=41.85 Aligned_cols=41 Identities=17% Similarity=0.183 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.|..+.+..|.|++.+|..+..++.|+.|| |++|+ +++-.|
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~l~~ 521 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLS---LNSNR-LTVLSH 521 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEE---EESCC-CSSCCC
T ss_pred cccEEECCCCcccccChhHccchhhhheeE---CCCCC-CCccCh
Confidence 444556666666666666666666666666 66665 444333
No 378
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=34.28 E-value=18 Score=37.34 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=26.4
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccc
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRA 72 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~ 72 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.
T Consensus 99 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---L~~n~-l~ 136 (597)
T 3oja_B 99 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV---LERND-LS 136 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CC
T ss_pred CCCCEEECCCCcCCCCCHHHHcCCCCCCEEE---eeCCC-CC
Confidence 4566666777777777777777777777777 77776 55
No 379
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=34.10 E-value=14 Score=34.10 Aligned_cols=60 Identities=12% Similarity=0.257 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCCCCC-CCCcccccCCcccccCccccccccccccCCCChhhhhhhhhhhccchhhhhhh
Q 011995 31 TTLPEPQIPTRSLQS-APPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQE 98 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~-~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 98 (473)
+.|.++.+..|.+++ .+|..+..++.|+.|+ |++|+ +.+..|..+..- ..+..+.+.++.
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~~~~~l----~~L~~L~L~~N~ 210 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLD---LSQCQ-LEQLSPTAFNSL----SSLQVLNMSHNN 210 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEE---CTTSC-CCEECTTTTTTC----TTCCEEECTTSC
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEE---CCCCC-cCCcCHHHhcCC----CCCCEEECCCCc
Confidence 567778889999998 6899999999999999 99999 887777665432 134455555543
No 380
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=33.97 E-value=15 Score=34.90 Aligned_cols=46 Identities=11% Similarity=0.011 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
++.|.++.+..|.|++.++..+.+++.|+.|+ |++|+ ..+..|...
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~~~~ 96 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALV---LTSNG-INTIEEDSF 96 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE---CTTSC-CCEECTTTT
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEE---CCCCc-cCccCHhhc
Confidence 34677888888888888887888888888888 88888 666655543
No 381
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=33.83 E-value=15 Score=39.91 Aligned_cols=35 Identities=17% Similarity=0.055 Sum_probs=18.4
Q ss_pred CCCCCCCCCCCCCCCCCcc--cccCCcccccCcccccccc
Q 011995 32 TLPEPQIPTRSLQSAPPSF--RTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~--~~~~~~~~~~~~~~ls~n~ 69 (473)
.|.++.+..|.|++.+|.. +.+++.|+.|| |++|+
T Consensus 98 ~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~---Ls~N~ 134 (844)
T 3j0a_A 98 HLFELRLYFCGLSDAVLKDGYFRNLKALTRLD---LSKNQ 134 (844)
T ss_dssp SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEE---EESCC
T ss_pred ccCEeeCcCCCCCcccccCccccccCCCCEEE---CCCCc
Confidence 3444555555555544432 55555555555 55555
No 382
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=33.63 E-value=14 Score=34.34 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCCCCCCccc--ccCCcccccCccccccccccccCCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFR--TRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~--~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|.++.+..|.|+|.+|..+ ..++.|+.|+ |++|+ ..+..|.
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~---Ls~n~-i~~~~~~ 135 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLR---LRNVS-WATGRSW 135 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCE---EESCC-CSSTTSS
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEE---eeccc-ccchhhh
Confidence 38888999999999999888 8999999999 99999 7766554
No 383
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=32.19 E-value=17 Score=34.01 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=37.0
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
++.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..|..+
T Consensus 191 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~~~ 236 (330)
T 1xku_A 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLG---LSFNS-ISAVDNGSL 236 (330)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEE---CCSSC-CCEECTTTG
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEE---CCCCc-CceeChhhc
Confidence 35677788888899998888888999999999 99998 776666543
No 384
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=32.13 E-value=15 Score=36.13 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.|+.+..+.++.|.|++.++..+.+++.|+.|+ |++|+ ...-.|..
T Consensus 62 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~---Ls~n~-i~~i~~~~ 107 (440)
T 3zyj_A 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQ---LSRNH-IRTIEIGA 107 (440)
T ss_dssp CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEE---CCSSC-CCEECGGG
T ss_pred CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEE---CCCCc-CCccChhh
Confidence 345667788999999999999999999999999 99998 66554443
No 385
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=31.37 E-value=13 Score=38.00 Aligned_cols=43 Identities=9% Similarity=0.060 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|..+.+..|.|++.+|+.+..++.|+.|+ |++|+ +. .+|..
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~-~lp~~ 118 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLD---VSHNR-LQ-NISCC 118 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEE---CTTSC-CC-EECSC
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEE---CCCCc-CC-ccCcc
Confidence 4567788899999999999999999999999 99999 55 45654
No 386
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=31.28 E-value=80 Score=32.70 Aligned_cols=46 Identities=11% Similarity=0.023 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHH--HHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 279 DWNTRVKIALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 279 ~~~~~~~i~~~i~--~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.|..+..++..+| +-+.|+=.- +|=.++||||+.+|.+.=+|||..
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHh
Confidence 3566667776655 455666544 477899999999999999999976
No 387
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=31.26 E-value=7.1 Score=36.65 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 30 PTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
.+.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..|
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~ 75 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLN---LSSNV-LYETLD 75 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEE---CTTSC-CEEEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEE---CCCCc-CCcchh
Confidence 45688899999999999999999999999999 99999 665443
No 388
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=30.32 E-value=22 Score=36.63 Aligned_cols=45 Identities=7% Similarity=-0.062 Sum_probs=35.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSL 79 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~ 79 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ +.+..|..+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~~~~ 119 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLY---MGFNA-IRYLPPHVF 119 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEE---CCSSC-CCCCCTTTT
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEE---CCCCc-CCCCCHHHH
Confidence 4577788888888888888888888888888 88888 777666553
No 389
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=30.17 E-value=8.6 Score=39.81 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCChhhh
Q 011995 34 PEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDA 81 (473)
Q Consensus 34 ~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~~~~ 81 (473)
..+.+..|.|+. +|..+..++.|+.|| |++|+ +++.+|..+..
T Consensus 210 ~~L~Ls~N~l~~-lp~~l~~l~~L~~L~---L~~N~-l~~~~p~~l~~ 252 (571)
T 3cvr_A 210 IFFRCRENRITH-IPENILSLDPTCTII---LEDNP-LSSRIRESLSQ 252 (571)
T ss_dssp EEEECCSSCCCC-CCGGGGGSCTTEEEE---CCSSS-CCHHHHHHHHH
T ss_pred eEEecCCCccee-cCHHHhcCCCCCEEE---eeCCc-CCCcCHHHHHH
Confidence 445566666663 555555577777777 77777 66666655443
No 390
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=28.85 E-value=22 Score=35.22 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALS 74 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~ 74 (473)
+.|.++.+..|.|++..|..+.+++.|+.|+ |++|+ +..-
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~---L~~n~-l~~~ 95 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLG---LRSNR-LKLI 95 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEE---CCSSC-CCSC
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEE---CCCCc-CCcc
Confidence 3455667777777777777777777777777 77777 5543
No 391
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=28.35 E-value=25 Score=36.71 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|.++.+..|.|++.+|..+.+++.|+.|+ |++|+ +.+..|.
T Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---Ls~n~-l~~~~~~ 139 (680)
T 1ziw_A 98 NLTELHLMSNSIQKIKNNPFVKQKNLITLD---LSHNG-LSSTKLG 139 (680)
T ss_dssp TCSEEECCSSCCCCCCSCTTTTCTTCCEEE---CCSSC-CSCCCCC
T ss_pred CCCEEECCCCccCccChhHccccCCCCEEE---CCCCc-ccccCch
Confidence 444555666666666666666666666666 66665 5554444
No 392
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=27.26 E-value=11 Score=37.85 Aligned_cols=42 Identities=12% Similarity=0.027 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
+.|..+.+..|.|++.+|+.+..++.|+.|+ |++|+ .. .+|.
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~-~lp~ 86 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLD---LSHNK-LV-KISC 86 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEE---CCSSC-CC-EEEC
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEe---cCCCc-ee-ecCc
Confidence 4566677888888888888888888888888 88777 44 3444
No 393
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=25.75 E-value=31 Score=33.06 Aligned_cols=40 Identities=8% Similarity=-0.075 Sum_probs=18.7
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 33 LPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 33 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
|..+.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..|
T Consensus 71 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~---L~~n~-l~~~~~ 110 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLY---MGFNA-IRYLPP 110 (390)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEE---CCSSC-CCCCCT
T ss_pred CcEEECCCCcccccChhhccCCCCcCEEE---CCCCC-CCcCCH
Confidence 34444444445444444444445555555 44444 443333
No 394
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=25.46 E-value=24 Score=33.84 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccc
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRA 72 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~ 72 (473)
+.|..+.+..|.|++.+|..+..++.|+.|+ |++|+ ..
T Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---L~~n~-l~ 130 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV---LERND-LS 130 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-CC
T ss_pred CCcCEEECCCCCCCcCCHHHhcCCCCCCEEE---CCCCc-cC
Confidence 4455666677777777777777777777777 77776 44
No 395
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=25.02 E-value=15 Score=32.67 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
.|+.|.++.+..|.|++.++..+..++.|+.|+ +++|+
T Consensus 29 ~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~---l~~n~ 66 (239)
T 2xwt_C 29 LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIY---VSIDV 66 (239)
T ss_dssp CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEE---EECCS
T ss_pred CCCcccEEEEeCCcceEECHHHccCCCCCcEEe---CCCCC
Confidence 556788889999999999998899999999999 99996
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=24.96 E-value=21 Score=29.96 Aligned_cols=40 Identities=5% Similarity=-0.007 Sum_probs=23.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccccccc
Q 011995 29 TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRAL 73 (473)
Q Consensus 29 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~ 73 (473)
.++.|.++.+..|.|+. +|.+....+.|+.|+ |++|+ ..+
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~---Ls~N~-l~~ 56 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IENLGATLDQFDAID---FSDNE-IRK 56 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEE---CCSSC-CCE
T ss_pred CcCCceEEEeeCCCCch-hHHhhhcCCCCCEEE---CCCCC-CCc
Confidence 35566666666777764 354433334677777 77776 443
No 397
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=24.63 E-value=22 Score=33.64 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
+.|.++.+..|.|+..++..+..++.|+.++ |++|. +.+..|
T Consensus 277 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~---L~~N~-~~~~~~ 318 (353)
T 2z80_A 277 SGLLELEFSRNQLKSVPDGIFDRLTSLQKIW---LHTNP-WDCSCP 318 (353)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE---CCSSC-BCCCHH
T ss_pred cCCCEEECCCCCCCccCHHHHhcCCCCCEEE---eeCCC-ccCcCC
Confidence 4677788889999965555568889999999 99998 777555
No 398
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=24.34 E-value=2.5e+02 Score=26.19 Aligned_cols=90 Identities=8% Similarity=-0.016 Sum_probs=49.7
Q ss_pred CceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeeee----cCCCCceEEEEEec
Q 011995 188 SSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHA----RDGSDQRMLIYERL 260 (473)
Q Consensus 188 ~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~----~~~~~~~~lV~E~~ 260 (473)
...||+....++ .+.+++..... ...|+.++..+. -+++.+.+.... ....+..++||+|+
T Consensus 36 ~N~vy~v~~~~g-----~~vLK~~~~~~-------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i 103 (339)
T 3i1a_A 36 NAFAYQADSESK-----SYFIKLKYGYH-------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI 103 (339)
T ss_dssp SCEEEEEECSSC-----EEEEEEEECSS-------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred ccceEEEEeCCC-----CEEEEEecCcc-------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence 578999974332 33344443221 135666666652 222444442210 00125678999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~ 301 (473)
+|..+.+ ..++.. .+.++...|+-||...
T Consensus 104 ~G~~~~~--------~~~~~~----~~~~lg~~La~LH~~~ 132 (339)
T 3i1a_A 104 HAPNGFT--------QNLTGK----QWKQLGKVLRQIHETS 132 (339)
T ss_dssp CCCBTTT--------SCCCHH----HHHHHHHHHHHHHTCC
T ss_pred CCCcCcc--------cCCCHH----HHHHHHHHHHHHhCcC
Confidence 8876521 113332 3457788899999876
No 399
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=24.06 E-value=13 Score=33.02 Aligned_cols=44 Identities=9% Similarity=0.070 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCC-CCCCCCcccccCCcccccCcccccc-ccccccCCCCh
Q 011995 31 TTLPEPQIPTRS-LQSAPPSFRTRVKPIPLNNTTKATN-NRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~-l~~~~p~~~~~~~~~~~~~~~~ls~-n~~~~~~~p~~ 78 (473)
+.|..+.+..|. |++.++..+..++.|+.|+ +++ |+ +..-.|..
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~---l~~~n~-l~~i~~~~ 100 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIE---IRNTRN-LTYIDPDA 100 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEE---EEEETT-CCEECTTS
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE---CCCCCC-eeEcCHHH
Confidence 446667777775 8877777788888888888 887 77 65544443
No 400
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=23.92 E-value=11 Score=35.95 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCCCCCCC----cccccCC-cccccCccccccccccccCCCChhhh
Q 011995 30 PTTLPEPQIPTRSLQSAPP----SFRTRVK-PIPLNNTTKATNNRTRALSAPSSLDA 81 (473)
Q Consensus 30 ~~~~~~~~~~~~~l~~~~p----~~~~~~~-~~~~~~~~~ls~n~~~~~~~p~~~~~ 81 (473)
++.|.++.+..|.|++..+ +.+..++ .|+.|+ |++|+ ..+..+..+..
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~---Ls~N~-l~~~~~~~l~~ 73 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLN---LSGNS-LGFKNSDELVQ 73 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEE---CCSSC-GGGSCHHHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEE---CcCCC-CCHHHHHHHHH
Confidence 4456667777777777666 5566666 677777 77776 66555555443
No 401
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=22.55 E-value=14 Score=34.75 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCC
Q 011995 32 TLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPS 77 (473)
Q Consensus 32 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~ 77 (473)
.|..+.+..|.|++. | .+..++.|+.|+ +++|+ ..+..|.
T Consensus 266 ~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~---L~~n~-l~~~~~~ 305 (347)
T 4fmz_A 266 KLKMLNVGSNQISDI-S-VLNNLSQLNSLF---LNNNQ-LGNEDME 305 (347)
T ss_dssp TCCEEECCSSCCCCC-G-GGGGCTTCSEEE---CCSSC-CCGGGHH
T ss_pred CcCEEEccCCccCCC-h-hhcCCCCCCEEE---CcCCc-CCCcChh
Confidence 344444555555553 2 244555555555 55555 4444433
No 402
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=22.14 E-value=15 Score=31.60 Aligned_cols=42 Identities=10% Similarity=-0.020 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCC
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAP 76 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p 76 (473)
+.|..+.+..|.+++..|..+..++.|+.|+ +++|+ .-+.+|
T Consensus 112 ~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~---L~~n~-~i~~~~ 153 (197)
T 4ezg_A 112 TSLTLLDISHSAHDDSILTKINTLPKVNSID---LSYNG-AITDIM 153 (197)
T ss_dssp TTCCEEECCSSBCBGGGHHHHTTCSSCCEEE---CCSCT-BCCCCG
T ss_pred CCCCEEEecCCccCcHhHHHHhhCCCCCEEE---ccCCC-CccccH
Confidence 4577788999999999999999999999999 99998 334444
No 403
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=21.54 E-value=31 Score=31.25 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=20.7
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCcccccccc
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR 69 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~ 69 (473)
+.|.++.+..|.|++.+| +..++.|+.|+ |++|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~---L~~N~ 96 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELS---VNRNR 96 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEE---CCSSC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEE---CCCCc
Confidence 345555666666666555 56666666666 66666
No 404
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=21.10 E-value=1e+02 Score=33.86 Aligned_cols=44 Identities=16% Similarity=0.061 Sum_probs=30.6
Q ss_pred HHHHHHHHHH--HHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 282 TRVKIALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 282 ~~~~i~~~i~--~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.+..++.++| +-+.|+=.- +|=.++||||+.+|.+.=+|||..-
T Consensus 783 ar~~F~~S~A~ySvv~YILGi-------gDRH~~NILid~tG~v~HIDFG~~f 828 (961)
T 1e7u_A 783 AVERFVYSCAGYCVATFVLGI-------GDRHNDNIMISETGNLFHIDFGHIL 828 (961)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-------CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHccc-------cCCCCcceEEecCCCEEEEeehhhh
Confidence 3344555443 344555433 4888999999999999999999763
No 405
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=20.83 E-value=1.3e+02 Score=33.50 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=29.5
Q ss_pred HHHHHH--HHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 286 IALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 286 i~~~i~--~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
++.++| +.+.|+=.- +|=.++||||+.+|.+.=+|||..-
T Consensus 923 F~~SlA~ySvv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 923 FTLSCAGYCVASYVLGI-------GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp HHHHHHHHHHHHHHTTC-------CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred HHHHHHHHHHHHHHhcC-------CCCCCccEEEecCCCEEEEeehhhh
Confidence 445443 344555433 5889999999999999999999763
No 406
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=20.66 E-value=19 Score=33.64 Aligned_cols=44 Identities=2% Similarity=-0.167 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 31 TTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 31 ~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
+.|.++.+..|.|++.+|..+..++.|+.|+ |++|+ ..+..|..
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~---Ls~N~-l~~~~~~~ 163 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLD---LKLNE-IDTVNFAE 163 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEE---CTTSC-CCEEEGGG
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEE---CCCCC-CCcccHHH
Confidence 3456666777777777776677777777777 77777 55544443
No 407
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=20.19 E-value=1.6e+02 Score=32.76 Aligned_cols=47 Identities=15% Similarity=0.054 Sum_probs=33.8
Q ss_pred CCHHH-HHHHHHHHH--HHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 278 IDWNT-RVKIALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 278 l~~~~-~~~i~~~i~--~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|.. +..++..+| +.+.|+=.- +|=.++||||+.+|.+.=+|||..
T Consensus 911 ~~~~~ar~nF~~S~A~ysvv~YiLgi-------gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 911 EIYDAAIDLFTRSCAGYCVATFILGI-------GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEEETTSCEEECCCCCC
T ss_pred HHHHHHHHHHHHHhhhhhheEEEEee-------cCCCCcceEEeCCCCEEEEeehhh
Confidence 34543 345666554 455666444 477899999999999999999976
Done!