Query 011997
Match_columns 473
No_of_seqs 451 out of 1340
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 07:31:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011997.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011997hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 4.1E-35 8.9E-40 264.8 34.3 357 37-451 9-367 (394)
2 PRK14995 methyl viologen resis 100.0 4.3E-34 9.3E-39 279.1 37.8 376 40-446 5-414 (495)
3 TIGR01299 synapt_SV2 synaptic 100.0 8.8E-35 1.9E-39 288.5 30.4 384 43-446 169-711 (742)
4 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.1E-34 4.6E-39 274.7 31.8 384 38-449 5-399 (412)
5 TIGR00903 2A0129 major facilit 100.0 2E-34 4.2E-39 269.2 29.0 338 53-444 3-341 (368)
6 TIGR00891 2A0112 putative sial 100.0 1E-33 2.2E-38 271.4 33.0 381 37-449 8-394 (405)
7 TIGR00893 2A0114 d-galactonate 100.0 2.3E-34 4.9E-39 275.2 28.3 366 51-447 4-375 (399)
8 PRK09556 uhpT sugar phosphate 100.0 9.1E-35 2E-39 282.3 25.3 372 43-444 31-411 (467)
9 COG2271 UhpC Sugar phosphate p 100.0 4.9E-35 1.1E-39 260.2 21.1 374 38-447 26-411 (448)
10 KOG2615 Permease of the major 100.0 4.4E-35 9.6E-40 255.4 19.6 382 58-460 42-429 (451)
11 TIGR00900 2A0121 H+ Antiporter 100.0 2.1E-33 4.5E-38 265.4 32.9 355 46-447 4-365 (365)
12 PRK11663 regulatory protein Uh 100.0 1E-33 2.2E-38 272.4 30.8 374 41-448 23-402 (434)
13 PRK03545 putative arabinose tr 100.0 3.2E-33 7E-38 265.8 33.9 351 40-450 8-360 (390)
14 PRK10406 alpha-ketoglutarate t 100.0 4.2E-33 9.1E-38 268.1 34.9 366 41-448 22-401 (432)
15 PRK11551 putative 3-hydroxyphe 100.0 2.7E-33 5.8E-38 268.2 31.7 358 38-449 12-374 (406)
16 TIGR00711 efflux_EmrB drug res 100.0 2.5E-32 5.5E-37 267.9 36.9 375 42-446 3-411 (485)
17 PRK12307 putative sialic acid 100.0 4.6E-33 1E-37 268.3 30.6 366 40-448 17-386 (426)
18 PRK10642 proline/glycine betai 100.0 1.3E-32 2.7E-37 268.7 33.1 380 41-448 16-407 (490)
19 PRK10213 nepI ribonucleoside t 100.0 5.9E-32 1.3E-36 256.4 36.1 349 39-449 18-370 (394)
20 PRK09705 cynX putative cyanate 100.0 4.6E-32 9.9E-37 257.4 33.7 335 57-452 25-362 (393)
21 TIGR00881 2A0104 phosphoglycer 100.0 4E-33 8.7E-38 264.8 25.9 371 49-449 3-376 (379)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 9.9E-33 2.1E-37 262.0 27.5 347 50-448 12-360 (377)
23 PRK10504 putative transporter; 100.0 3.1E-31 6.7E-36 258.8 37.9 378 40-449 9-419 (471)
24 PRK09952 shikimate transporter 100.0 1.7E-31 3.7E-36 256.9 35.0 373 40-447 21-408 (438)
25 TIGR00879 SP MFS transporter, 100.0 5.9E-32 1.3E-36 265.2 31.4 376 46-450 33-450 (481)
26 PRK10091 MFS transport protein 100.0 2.1E-31 4.5E-36 252.4 33.6 350 41-450 3-355 (382)
27 PRK15075 citrate-proton sympor 100.0 2.7E-31 6E-36 255.7 32.9 365 40-448 14-397 (434)
28 PRK05122 major facilitator sup 100.0 5.2E-31 1.1E-35 251.8 33.5 346 40-450 14-369 (399)
29 TIGR00710 efflux_Bcr_CflA drug 100.0 6.9E-31 1.5E-35 250.0 34.2 352 41-442 5-358 (385)
30 PRK10489 enterobactin exporter 100.0 8.3E-32 1.8E-36 258.5 28.0 353 45-450 21-379 (417)
31 PRK10133 L-fucose transporter; 100.0 4.1E-31 8.9E-36 253.2 32.3 368 40-447 25-409 (438)
32 PRK03633 putative MFS family t 100.0 8E-31 1.7E-35 248.4 33.6 345 41-449 6-351 (381)
33 PRK03699 putative transporter; 100.0 9.9E-31 2.2E-35 248.8 34.4 355 40-451 6-361 (394)
34 PRK12382 putative transporter; 100.0 7.5E-31 1.6E-35 249.9 33.2 344 41-449 15-368 (392)
35 PF07690 MFS_1: Major Facilita 100.0 2.8E-31 6.1E-36 249.5 29.7 347 46-436 1-352 (352)
36 PRK15034 nitrate/nitrite trans 100.0 9.1E-31 2E-35 245.6 31.9 370 39-450 32-433 (462)
37 PRK10077 xylE D-xylose transpo 100.0 9.4E-31 2E-35 256.2 33.0 385 40-443 11-424 (479)
38 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-31 3E-36 262.3 27.1 391 40-446 15-455 (502)
39 TIGR00892 2A0113 monocarboxyla 100.0 6.5E-31 1.4E-35 253.8 30.6 385 38-457 16-407 (455)
40 PRK15402 multidrug efflux syst 100.0 1.4E-30 3.1E-35 249.1 32.3 356 45-449 17-374 (406)
41 PRK11195 lysophospholipid tran 100.0 7.8E-31 1.7E-35 248.7 30.1 354 42-449 4-359 (393)
42 PRK11646 multidrug resistance 100.0 3.9E-30 8.4E-35 244.5 34.5 347 44-448 13-362 (400)
43 KOG0569 Permease of the major 100.0 4.6E-30 9.9E-35 239.4 33.2 363 69-448 47-433 (485)
44 PRK03893 putative sialic acid 100.0 1.1E-30 2.3E-35 256.9 30.7 381 38-450 17-433 (496)
45 TIGR00898 2A0119 cation transp 100.0 3.7E-31 7.9E-36 260.6 27.0 339 62-440 110-467 (505)
46 TIGR00895 2A0115 benzoate tran 100.0 3.1E-30 6.7E-35 246.7 32.0 368 40-442 16-397 (398)
47 PRK11273 glpT sn-glycerol-3-ph 100.0 1.3E-30 2.7E-35 252.3 29.4 367 48-449 36-414 (452)
48 PRK15403 multidrug efflux syst 100.0 1.7E-29 3.8E-34 240.9 35.8 352 45-445 20-373 (413)
49 TIGR00897 2A0118 polyol permea 100.0 8.4E-30 1.8E-34 243.0 33.6 362 41-450 13-381 (402)
50 PRK10054 putative transporter; 100.0 3.3E-30 7.1E-35 244.6 29.5 354 41-449 7-363 (395)
51 TIGR00894 2A0114euk Na(+)-depe 100.0 2.2E-30 4.8E-35 252.1 27.1 376 37-446 15-423 (465)
52 PLN00028 nitrate transmembrane 100.0 8.1E-30 1.8E-34 247.4 30.8 360 40-439 35-403 (476)
53 PRK11043 putative transporter; 100.0 5.9E-29 1.3E-33 237.6 36.2 349 43-445 8-357 (401)
54 PRK09874 drug efflux system pr 100.0 1.4E-29 3E-34 243.0 31.6 362 41-449 14-377 (408)
55 TIGR00899 2A0120 sugar efflux 100.0 4.1E-29 8.8E-34 237.0 33.7 344 48-449 4-353 (375)
56 KOG1330 Sugar transporter/spin 100.0 3.1E-31 6.8E-36 238.2 17.8 379 35-450 27-417 (493)
57 TIGR00712 glpT glycerol-3-phos 100.0 2.9E-30 6.3E-35 248.9 25.4 375 43-449 29-412 (438)
58 PRK11652 emrD multidrug resist 100.0 1.6E-28 3.5E-33 234.0 35.2 354 38-445 5-360 (394)
59 TIGR00902 2A0127 phenyl propri 100.0 1.1E-28 2.3E-33 233.7 33.4 345 45-448 8-358 (382)
60 TIGR00896 CynX cyanate transpo 100.0 2.1E-28 4.6E-33 229.9 32.1 336 55-449 14-352 (355)
61 TIGR00883 2A0106 metabolite-pr 100.0 3.2E-29 6.8E-34 239.4 26.8 356 51-448 3-378 (394)
62 TIGR00885 fucP L-fucose:H+ sym 100.0 2.7E-28 5.8E-33 231.8 32.9 365 42-446 4-382 (410)
63 cd06174 MFS The Major Facilita 100.0 1.7E-28 3.7E-33 230.6 30.1 326 45-448 3-330 (352)
64 PRK10473 multidrug efflux syst 100.0 1E-27 2.2E-32 228.5 35.6 346 44-449 6-353 (392)
65 PRK11102 bicyclomycin/multidru 100.0 4E-28 8.6E-33 230.2 32.5 336 55-439 5-343 (377)
66 TIGR00886 2A0108 nitrite extru 100.0 4E-29 8.6E-34 236.2 25.5 357 43-431 3-365 (366)
67 COG2223 NarK Nitrate/nitrite t 100.0 1.9E-29 4.1E-34 225.2 20.7 366 37-450 10-380 (417)
68 PRK11010 ampG muropeptide tran 100.0 4.6E-27 9.9E-32 228.5 34.6 360 40-448 11-381 (491)
69 PRK11128 putative 3-phenylprop 100.0 5.1E-27 1.1E-31 222.4 33.1 340 50-448 13-358 (382)
70 PF05977 MFS_3: Transmembrane 100.0 1.8E-27 3.8E-32 229.1 30.1 363 38-451 7-375 (524)
71 PRK15011 sugar efflux transpor 100.0 4.3E-26 9.4E-31 216.8 35.4 345 43-448 17-369 (393)
72 KOG0254 Predicted transporter 100.0 1.2E-26 2.5E-31 227.5 30.8 372 57-447 63-459 (513)
73 TIGR00889 2A0110 nucleoside tr 100.0 2.1E-26 4.6E-31 219.7 31.3 355 45-448 6-374 (418)
74 KOG2532 Permease of the major 100.0 1.5E-27 3.2E-32 225.7 21.3 338 69-444 66-418 (466)
75 PRK11902 ampG muropeptide tran 100.0 1.5E-25 3.2E-30 213.9 33.6 351 47-449 5-369 (402)
76 PRK06814 acylglycerophosphoeth 100.0 1.3E-26 2.8E-31 249.4 29.3 325 84-446 54-397 (1140)
77 PRK08633 2-acyl-glycerophospho 100.0 1.9E-26 4.2E-31 249.1 30.2 369 41-444 9-383 (1146)
78 TIGR00924 yjdL_sub1_fam amino 100.0 1.2E-25 2.7E-30 217.4 32.5 383 41-446 10-444 (475)
79 PRK09528 lacY galactoside perm 100.0 2.4E-26 5.2E-31 220.8 26.1 361 42-449 11-382 (420)
80 TIGR00882 2A0105 oligosacchari 100.0 5E-26 1.1E-30 216.9 28.0 360 42-449 3-374 (396)
81 TIGR00901 2A0125 AmpG-related 100.0 1.5E-25 3.1E-30 210.8 30.8 332 57-429 4-355 (356)
82 TIGR00805 oat sodium-independe 100.0 6.6E-27 1.4E-31 232.2 22.5 387 45-446 37-582 (633)
83 KOG3764 Vesicular amine transp 100.0 3.7E-28 8E-33 213.6 11.5 324 82-452 106-436 (464)
84 KOG0253 Synaptic vesicle trans 100.0 3.8E-26 8.2E-31 198.5 22.2 370 40-439 77-490 (528)
85 COG0738 FucP Fucose permease [ 99.9 3.1E-25 6.8E-30 196.9 26.1 369 40-451 12-390 (422)
86 PF06609 TRI12: Fungal trichot 99.9 2.9E-24 6.4E-29 205.8 34.8 365 52-446 55-468 (599)
87 TIGR02718 sider_RhtX_FptX side 99.9 4.5E-24 9.8E-29 203.0 34.6 357 43-448 3-369 (390)
88 KOG2533 Permease of the major 99.9 3.3E-25 7.1E-30 210.1 24.9 281 47-350 51-335 (495)
89 PRK10207 dipeptide/tripeptide 99.9 4.6E-24 9.9E-29 206.4 33.3 374 40-442 13-438 (489)
90 KOG2504 Monocarboxylate transp 99.9 1.9E-24 4.2E-29 207.2 28.3 396 37-468 42-473 (509)
91 KOG0252 Inorganic phosphate tr 99.9 1.2E-27 2.6E-32 214.3 2.4 393 44-445 44-468 (538)
92 TIGR00792 gph sugar (Glycoside 99.9 7.7E-24 1.7E-28 205.0 28.7 350 55-449 13-384 (437)
93 COG2807 CynX Cyanate permease 99.9 1E-22 2.2E-27 178.2 31.5 335 56-451 27-365 (395)
94 PF00083 Sugar_tr: Sugar (and 99.9 3.1E-30 6.8E-35 250.5 -18.8 385 48-450 7-416 (451)
95 KOG0255 Synaptic vesicle trans 99.9 7.6E-23 1.6E-27 201.9 28.5 338 69-444 111-467 (521)
96 PF03825 Nuc_H_symport: Nucleo 99.9 5.1E-22 1.1E-26 186.1 32.1 358 46-450 7-369 (400)
97 TIGR01301 GPH_sucrose GPH fami 99.9 2E-21 4.3E-26 184.1 30.8 386 39-451 2-450 (477)
98 TIGR00806 rfc RFC reduced fola 99.9 9.1E-22 2E-26 181.2 26.9 363 45-439 31-409 (511)
99 PRK09584 tppB putative tripept 99.9 3.6E-21 7.9E-26 187.4 31.3 374 41-439 21-438 (500)
100 PRK09669 putative symporter Ya 99.9 4E-20 8.7E-25 178.8 31.9 364 39-449 7-392 (444)
101 PF01306 LacY_symp: LacY proto 99.9 9.8E-21 2.1E-25 173.8 24.9 366 41-454 7-384 (412)
102 PRK15462 dipeptide/tripeptide 99.9 3.5E-19 7.6E-24 169.6 33.9 378 40-446 8-437 (493)
103 TIGR00788 fbt folate/biopterin 99.9 8.5E-21 1.8E-25 183.2 23.2 372 41-447 26-415 (468)
104 PRK10429 melibiose:sodium symp 99.9 7.2E-20 1.6E-24 178.1 28.7 368 43-449 8-397 (473)
105 PTZ00207 hypothetical protein; 99.9 8.3E-19 1.8E-23 169.8 32.1 352 58-449 44-518 (591)
106 KOG4686 Predicted sugar transp 99.9 2.1E-22 4.6E-27 169.1 5.8 365 44-449 47-418 (459)
107 PF11700 ATG22: Vacuole efflux 99.9 6.3E-18 1.4E-22 161.5 35.0 344 82-451 70-448 (477)
108 PF13347 MFS_2: MFS/sugar tran 99.9 1.1E-19 2.3E-24 175.0 22.6 344 63-451 24-390 (428)
109 PRK09848 glucuronide transport 99.8 3.5E-18 7.6E-23 165.6 31.9 359 39-449 6-392 (448)
110 TIGR01272 gluP glucose/galacto 99.8 2E-18 4.4E-23 157.5 23.4 285 130-448 5-293 (310)
111 KOG2325 Predicted transporter/ 99.8 1.6E-19 3.6E-24 167.6 15.6 387 35-450 28-455 (488)
112 PRK11462 putative transporter; 99.8 1.2E-16 2.6E-21 154.4 34.4 362 40-449 8-391 (460)
113 COG2211 MelB Na+/melibiose sym 99.8 3.6E-17 7.8E-22 151.8 29.0 374 37-452 8-403 (467)
114 KOG2816 Predicted transporter 99.8 2.8E-17 6.1E-22 155.2 28.1 375 45-458 26-405 (463)
115 KOG2563 Permease of the major 99.8 1.5E-17 3.2E-22 150.1 19.7 367 43-449 47-425 (480)
116 PF03209 PUCC: PUCC protein; 99.8 1.5E-15 3.3E-20 137.1 29.3 337 66-448 5-366 (403)
117 COG2270 Permeases of the major 99.7 4E-16 8.6E-21 140.3 21.7 344 81-451 57-409 (438)
118 COG3104 PTR2 Dipeptide/tripept 99.7 5.1E-15 1.1E-19 136.3 28.9 378 41-441 21-452 (498)
119 PF03137 OATP: Organic Anion T 99.7 4.1E-19 8.9E-24 172.0 -0.3 390 45-446 7-515 (539)
120 KOG3626 Organic anion transpor 99.7 1.5E-15 3.3E-20 147.1 18.9 390 45-446 101-650 (735)
121 PF05631 DUF791: Protein of un 99.7 1.3E-13 2.9E-18 122.6 26.1 269 50-364 43-319 (354)
122 PRK10642 proline/glycine betai 99.6 6.2E-15 1.3E-19 144.3 18.0 173 52-245 261-438 (490)
123 TIGR00889 2A0110 nucleoside tr 99.6 1.3E-14 2.7E-19 138.9 16.0 183 50-242 217-408 (418)
124 TIGR01299 synapt_SV2 synaptic 99.6 4.4E-14 9.6E-19 141.5 17.9 140 85-241 598-738 (742)
125 PRK15011 sugar efflux transpor 99.6 1.7E-13 3.6E-18 130.6 18.6 158 58-238 233-392 (393)
126 TIGR00880 2_A_01_02 Multidrug 99.6 3.6E-14 7.8E-19 114.1 10.8 108 88-195 4-112 (141)
127 PRK11551 putative 3-hydroxyphe 99.5 1.8E-13 3.8E-18 131.3 17.0 142 48-195 227-369 (406)
128 TIGR00890 2A0111 Oxalate/Forma 99.5 9.1E-14 2E-18 131.8 14.5 140 50-195 214-356 (377)
129 PRK05122 major facilitator sup 99.5 3.5E-13 7.6E-18 128.9 18.0 161 56-240 231-392 (399)
130 PRK09528 lacY galactoside perm 99.5 1.5E-13 3.1E-18 132.3 14.9 112 84-195 264-377 (420)
131 TIGR00902 2A0127 phenyl propri 99.5 3.7E-13 8E-18 127.7 17.1 148 41-195 205-354 (382)
132 TIGR00899 2A0120 sugar efflux 99.5 8.3E-13 1.8E-17 125.2 17.6 155 61-238 219-375 (375)
133 cd06174 MFS The Major Facilita 99.5 8.8E-13 1.9E-17 123.7 17.1 163 50-234 184-349 (352)
134 PRK10489 enterobactin exporter 99.5 7.6E-13 1.7E-17 127.2 16.6 162 60-243 242-406 (417)
135 PRK09705 cynX putative cyanate 99.5 3.1E-12 6.6E-17 121.8 19.8 179 43-244 207-389 (393)
136 PRK09874 drug efflux system pr 99.5 1.2E-12 2.6E-17 125.6 16.7 162 55-234 233-395 (408)
137 PRK12382 putative transporter; 99.5 2.2E-12 4.7E-17 123.0 17.8 133 55-195 230-363 (392)
138 TIGR00897 2A0118 polyol permea 99.5 1.7E-12 3.8E-17 124.0 17.0 171 43-236 224-400 (402)
139 PRK03633 putative MFS family t 99.5 2.9E-12 6.4E-17 121.6 17.4 131 56-195 215-346 (381)
140 PF03092 BT1: BT1 family; Int 99.5 4.3E-12 9.4E-17 121.2 18.3 356 61-450 10-385 (433)
141 PRK03699 putative transporter; 99.4 3.3E-12 7.2E-17 121.7 16.7 146 43-195 207-354 (394)
142 TIGR00893 2A0114 d-galactonate 99.4 4.4E-12 9.4E-17 121.2 17.2 148 41-195 215-372 (399)
143 TIGR00892 2A0113 monocarboxyla 99.4 6.6E-13 1.4E-17 128.6 11.2 147 43-195 243-394 (455)
144 PRK03545 putative arabinose tr 99.4 7.9E-12 1.7E-16 119.1 17.9 145 65-233 230-376 (390)
145 PF06963 FPN1: Ferroportin1 (F 99.4 2.7E-09 5.8E-14 100.1 33.6 368 41-438 2-411 (432)
146 PRK03893 putative sialic acid 99.4 4.1E-12 9E-17 125.2 15.0 130 60-195 294-427 (496)
147 TIGR00883 2A0106 metabolite-pr 99.4 2.2E-12 4.7E-17 123.2 12.4 147 43-195 221-374 (394)
148 PRK11128 putative 3-phenylprop 99.4 1.5E-11 3.3E-16 116.6 17.0 146 43-195 207-354 (382)
149 PRK09556 uhpT sugar phosphate 99.4 1.8E-11 3.8E-16 119.4 16.7 148 42-195 259-411 (467)
150 TIGR00895 2A0115 benzoate tran 99.4 8E-12 1.7E-16 119.5 14.1 143 45-193 254-397 (398)
151 PRK09952 shikimate transporter 99.4 2.2E-11 4.8E-16 117.5 16.7 167 53-239 262-435 (438)
152 PRK11273 glpT sn-glycerol-3-ph 99.4 1.5E-11 3.3E-16 119.4 15.4 147 43-195 255-409 (452)
153 TIGR00900 2A0121 H+ Antiporter 99.4 7.4E-12 1.6E-16 118.2 12.4 128 62-195 232-362 (365)
154 PF01770 Folate_carrier: Reduc 99.4 2E-09 4.3E-14 99.1 27.5 366 44-438 8-395 (412)
155 TIGR00879 SP MFS transporter, 99.3 3.1E-11 6.6E-16 118.5 16.4 172 47-240 290-474 (481)
156 PRK12307 putative sialic acid 99.3 2.9E-11 6.2E-16 116.8 15.7 130 60-195 250-382 (426)
157 PRK11663 regulatory protein Uh 99.3 5.3E-11 1.1E-15 114.9 17.5 146 43-195 245-398 (434)
158 PF05977 MFS_3: Transmembrane 99.3 1.4E-10 3.1E-15 112.5 19.7 136 54-195 231-368 (524)
159 PF11700 ATG22: Vacuole efflux 99.3 1E-10 2.2E-15 112.3 18.1 179 41-240 281-471 (477)
160 TIGR00891 2A0112 putative sial 99.3 2.1E-11 4.5E-16 116.9 13.6 130 60-195 257-389 (405)
161 PRK10504 putative transporter; 99.3 5.1E-11 1.1E-15 116.6 16.4 147 43-195 263-414 (471)
162 TIGR00887 2A0109 phosphate:H+ 99.3 3.9E-11 8.4E-16 118.1 14.9 179 58-242 305-494 (502)
163 COG2814 AraJ Arabinose efflux 99.3 1.4E-10 3E-15 106.1 17.0 171 41-235 211-384 (394)
164 TIGR00882 2A0105 oligosacchari 99.3 8.2E-11 1.8E-15 112.3 15.3 112 84-195 256-369 (396)
165 TIGR02718 sider_RhtX_FptX side 99.3 1.3E-10 2.7E-15 110.8 15.1 139 51-195 218-365 (390)
166 TIGR00792 gph sugar (Glycoside 99.3 3.8E-11 8.2E-16 116.4 11.4 148 42-195 223-379 (437)
167 PRK15402 multidrug efflux syst 99.2 2.6E-10 5.7E-15 109.3 16.4 127 62-195 236-369 (406)
168 TIGR00881 2A0104 phosphoglycer 99.2 8.8E-11 1.9E-15 111.4 12.6 154 43-209 218-378 (379)
169 PRK15075 citrate-proton sympor 99.2 4.3E-10 9.3E-15 108.7 17.3 137 53-195 250-393 (434)
170 TIGR00898 2A0119 cation transp 99.2 8.5E-11 1.8E-15 116.1 12.5 135 89-241 362-499 (505)
171 KOG0569 Permease of the major 99.2 4.3E-10 9.4E-15 106.2 16.2 166 56-243 285-461 (485)
172 PLN00028 nitrate transmembrane 99.2 1.1E-10 2.3E-15 113.9 12.7 154 60-237 271-433 (476)
173 PRK10054 putative transporter; 99.2 2.1E-10 4.6E-15 109.2 14.0 111 84-195 246-358 (395)
174 PRK11010 ampG muropeptide tran 99.2 6.8E-10 1.5E-14 108.6 17.8 153 65-239 247-405 (491)
175 TIGR00712 glpT glycerol-3-phos 99.2 3.7E-10 8E-15 109.2 15.8 145 45-195 255-407 (438)
176 COG2271 UhpC Sugar phosphate p 99.2 2.6E-10 5.6E-15 103.2 13.5 157 41-210 252-416 (448)
177 TIGR00896 CynX cyanate transpo 99.2 5.3E-10 1.1E-14 105.1 16.0 140 49-195 205-347 (355)
178 PF03825 Nuc_H_symport: Nucleo 99.2 7.2E-10 1.6E-14 104.5 16.5 156 42-210 208-371 (400)
179 PRK10406 alpha-ketoglutarate t 99.2 1.1E-09 2.5E-14 105.6 18.3 135 54-194 256-397 (432)
180 COG2270 Permeases of the major 99.2 6.9E-10 1.5E-14 100.6 15.1 133 58-196 269-403 (438)
181 PRK10213 nepI ribonucleoside t 99.2 1.8E-09 3.9E-14 102.8 18.0 124 64-195 240-365 (394)
182 PF02487 CLN3: CLN3 protein; 99.2 5.2E-08 1.1E-12 89.8 26.4 330 84-444 61-396 (402)
183 KOG0637 Sucrose transporter an 99.1 2.1E-10 4.6E-15 104.4 10.1 147 41-193 32-202 (498)
184 PRK10077 xylE D-xylose transpo 99.1 1.3E-09 2.9E-14 107.0 16.7 130 59-194 289-424 (479)
185 TIGR01272 gluP glucose/galacto 99.1 2.4E-09 5.3E-14 97.9 16.6 146 41-195 140-289 (310)
186 KOG4686 Predicted sugar transp 99.1 2.1E-09 4.6E-14 91.6 14.2 146 43-196 266-414 (459)
187 PRK10091 MFS transport protein 99.1 2.1E-09 4.6E-14 102.0 16.3 123 65-195 224-349 (382)
188 PRK11646 multidrug resistance 99.1 8.4E-10 1.8E-14 105.2 13.5 129 61-195 228-358 (400)
189 TIGR00901 2A0125 AmpG-related 99.1 2.9E-10 6.2E-15 107.0 10.1 132 43-180 211-355 (356)
190 KOG0253 Synaptic vesicle trans 99.1 2.5E-10 5.4E-15 100.8 8.6 126 92-238 391-520 (528)
191 PRK11902 ampG muropeptide tran 99.1 1.8E-09 3.8E-14 103.3 15.2 149 65-239 234-392 (402)
192 KOG2504 Monocarboxylate transp 99.1 9.1E-10 2E-14 106.5 13.0 174 43-237 300-476 (509)
193 TIGR00769 AAA ADP/ATP carrier 99.1 1.8E-07 3.9E-12 89.0 28.0 374 40-447 6-441 (472)
194 COG2223 NarK Nitrate/nitrite t 99.1 1.4E-09 3.1E-14 98.5 12.1 148 41-195 218-374 (417)
195 TIGR00711 efflux_EmrB drug res 99.1 1.7E-09 3.7E-14 106.4 13.7 143 47-195 261-409 (485)
196 TIGR00894 2A0114euk Na(+)-depe 99.1 3.7E-09 8.1E-14 103.2 15.0 177 41-237 261-450 (465)
197 KOG3098 Uncharacterized conser 99.0 1.3E-07 2.8E-12 88.7 24.2 336 84-442 51-411 (461)
198 PF06813 Nodulin-like: Nodulin 99.0 1.4E-08 2.9E-13 88.0 16.5 132 56-195 17-156 (250)
199 TIGR02332 HpaX 4-hydroxyphenyl 99.0 4.2E-09 9E-14 100.9 14.8 146 44-195 245-394 (412)
200 PF07690 MFS_1: Major Facilita 99.0 1.2E-09 2.6E-14 102.6 10.7 136 46-187 211-352 (352)
201 PF13347 MFS_2: MFS/sugar tran 99.0 6.9E-09 1.5E-13 100.1 16.1 150 41-196 225-384 (428)
202 PRK09848 glucuronide transport 99.0 3.3E-09 7.2E-14 103.0 13.6 147 43-195 230-387 (448)
203 PRK10473 multidrug efflux syst 99.0 7.3E-09 1.6E-13 98.8 15.6 119 67-195 230-348 (392)
204 TIGR00710 efflux_Bcr_CflA drug 99.0 6.9E-09 1.5E-13 98.8 15.2 124 60-190 225-356 (385)
205 KOG3574 Acetyl-CoA transporter 99.0 4.4E-08 9.5E-13 87.2 17.9 373 38-449 28-435 (510)
206 PRK10429 melibiose:sodium symp 99.0 4.7E-09 1E-13 102.5 13.4 149 41-195 231-392 (473)
207 PF01306 LacY_symp: LacY proto 99.0 1.4E-08 2.9E-13 94.2 15.4 142 84-241 261-405 (412)
208 PRK11043 putative transporter; 99.0 1.5E-08 3.2E-13 97.1 16.1 129 60-195 222-356 (401)
209 PRK14995 methyl viologen resis 99.0 5.4E-09 1.2E-13 102.7 13.2 142 48-195 266-412 (495)
210 PRK08633 2-acyl-glycerophospho 99.0 1.6E-08 3.5E-13 110.3 17.2 132 58-195 249-383 (1146)
211 PRK10133 L-fucose transporter; 99.0 1.6E-08 3.4E-13 97.6 15.1 118 69-195 288-406 (438)
212 KOG4332 Predicted sugar transp 99.0 2.1E-08 4.6E-13 84.8 13.8 332 47-426 43-387 (454)
213 PRK09669 putative symporter Ya 98.9 4.9E-09 1.1E-13 101.6 11.2 112 84-195 266-387 (444)
214 PRK06814 acylglycerophosphoeth 98.9 1.7E-08 3.6E-13 109.8 16.3 147 43-195 227-395 (1140)
215 TIGR00903 2A0129 major facilit 98.9 4.7E-08 1E-12 91.8 17.2 144 41-194 192-340 (368)
216 PRK11195 lysophospholipid tran 98.9 5.4E-08 1.2E-12 92.7 17.8 122 66-194 231-354 (393)
217 TIGR00926 2A1704 Peptide:H+ sy 98.9 7.3E-07 1.6E-11 89.0 25.8 128 62-195 9-149 (654)
218 KOG3762 Predicted transporter 98.9 6.1E-08 1.3E-12 90.4 15.5 136 316-458 399-535 (618)
219 PRK15034 nitrate/nitrite trans 98.9 3.9E-08 8.5E-13 93.5 14.7 146 43-195 254-427 (462)
220 PRK15462 dipeptide/tripeptide 98.9 2.6E-08 5.6E-13 95.8 13.6 158 282-450 9-169 (493)
221 TIGR00924 yjdL_sub1_fam amino 98.9 2.1E-08 4.6E-13 97.6 12.8 161 279-449 6-171 (475)
222 PRK09584 tppB putative tripept 98.9 3.3E-08 7.2E-13 96.8 14.0 165 274-449 12-180 (500)
223 PRK11102 bicyclomycin/multidru 98.9 7.3E-08 1.6E-12 91.4 15.6 128 57-191 210-344 (377)
224 COG0477 ProP Permeases of the 98.8 1.7E-07 3.6E-12 86.2 16.6 143 47-195 8-157 (338)
225 TIGR00788 fbt folate/biopterin 98.8 2.3E-08 4.9E-13 97.1 11.0 156 69-238 281-447 (468)
226 TIGR00886 2A0108 nitrite extru 98.8 1.7E-07 3.7E-12 88.6 16.0 151 284-446 3-153 (366)
227 COG2211 MelB Na+/melibiose sym 98.8 1.2E-07 2.5E-12 89.1 12.9 150 41-196 236-396 (467)
228 PRK10207 dipeptide/tripeptide 98.7 1.5E-07 3.2E-12 91.8 13.8 156 282-448 14-172 (489)
229 PRK11652 emrD multidrug resist 98.7 1.9E-07 4.2E-12 89.1 14.1 126 316-448 36-161 (394)
230 PRK11462 putative transporter; 98.7 2.5E-07 5.4E-12 89.8 14.2 141 49-195 236-386 (460)
231 TIGR00885 fucP L-fucose:H+ sym 98.7 9.3E-07 2E-11 84.5 17.6 152 284-445 5-156 (410)
232 PRK15403 multidrug efflux syst 98.7 2.9E-07 6.3E-12 88.3 13.9 127 316-449 44-170 (413)
233 KOG3762 Predicted transporter 98.7 1.6E-07 3.5E-12 87.7 10.2 152 46-210 376-529 (618)
234 COG2807 CynX Cyanate permease 98.6 2.1E-06 4.5E-11 76.7 16.4 147 43-196 210-359 (395)
235 KOG2532 Permease of the major 98.6 3.7E-07 8E-12 87.4 12.6 179 36-235 247-445 (466)
236 TIGR00806 rfc RFC reduced fola 98.6 1.3E-06 2.7E-11 82.1 15.3 121 315-443 53-174 (511)
237 KOG3764 Vesicular amine transp 98.6 1.6E-07 3.5E-12 84.4 8.9 158 51-230 280-447 (464)
238 KOG0252 Inorganic phosphate tr 98.6 4.7E-08 1E-12 89.5 5.1 193 41-244 304-505 (538)
239 PF06779 DUF1228: Protein of u 98.6 1.6E-07 3.5E-12 65.5 6.6 81 53-139 4-84 (85)
240 TIGR00880 2_A_01_02 Multidrug 98.6 1.7E-07 3.6E-12 74.9 7.2 110 332-448 7-116 (141)
241 PTZ00207 hypothetical protein; 98.5 3.2E-06 7E-11 83.0 15.8 128 314-444 53-180 (591)
242 PF13000 Acatn: Acetyl-coenzym 98.5 3.8E-05 8.3E-10 71.8 21.2 386 44-448 3-470 (544)
243 TIGR01301 GPH_sucrose GPH fami 98.5 5.7E-06 1.2E-10 79.4 16.6 186 42-241 259-476 (477)
244 PF00083 Sugar_tr: Sugar (and 98.5 8.9E-10 1.9E-14 107.2 -9.7 163 58-243 270-443 (451)
245 PF05978 UNC-93: Ion channel r 98.5 4.6E-06 1E-10 66.7 12.9 106 88-194 43-149 (156)
246 COG0738 FucP Fucose permease [ 98.5 3E-06 6.4E-11 76.9 12.9 147 40-195 235-383 (422)
247 PF12832 MFS_1_like: MFS_1 lik 98.5 6E-07 1.3E-11 62.3 6.5 71 46-122 5-75 (77)
248 KOG1330 Sugar transporter/spin 98.5 3.1E-07 6.7E-12 84.5 6.5 148 316-470 61-208 (493)
249 PF03209 PUCC: PUCC protein; 98.4 6.7E-06 1.5E-10 75.3 14.1 171 52-234 219-395 (403)
250 TIGR00805 oat sodium-independe 98.4 3.8E-07 8.2E-12 91.7 5.7 133 313-446 58-235 (633)
251 KOG1237 H+/oligopeptide sympor 98.3 0.0014 3E-08 64.7 28.8 140 58-210 55-227 (571)
252 PF03219 TLC: TLC ATP/ADP tran 98.3 0.0002 4.3E-09 68.9 22.4 343 84-446 60-457 (491)
253 COG3202 ATP/ADP translocase [E 98.3 0.0011 2.5E-08 62.1 25.8 378 40-447 26-461 (509)
254 KOG0254 Predicted transporter 98.2 5.2E-05 1.1E-09 75.0 16.0 135 45-186 299-447 (513)
255 KOG3810 Micronutrient transpor 98.1 4.9E-05 1.1E-09 67.5 11.6 320 96-438 56-381 (433)
256 KOG2816 Predicted transporter 98.1 4.6E-05 9.9E-10 72.9 11.6 123 67-195 268-391 (463)
257 KOG2615 Permease of the major 98.1 9.9E-05 2.1E-09 66.6 12.8 121 69-195 290-413 (451)
258 COG3104 PTR2 Dipeptide/tripept 98.0 1.1E-05 2.3E-10 75.6 6.8 169 276-449 14-185 (498)
259 KOG2533 Permease of the major 98.0 1.3E-05 2.8E-10 77.3 7.4 140 42-187 274-421 (495)
260 PF06609 TRI12: Fungal trichot 98.0 5.3E-05 1.2E-09 74.2 10.8 119 316-443 72-190 (599)
261 TIGR00939 2a57 Equilibrative N 97.9 0.0021 4.5E-08 61.6 20.5 54 386-439 375-428 (437)
262 KOG1479 Nucleoside transporter 97.9 0.0014 3.1E-08 60.4 17.9 56 386-442 346-401 (406)
263 KOG0255 Synaptic vesicle trans 97.8 0.001 2.2E-08 66.1 17.2 140 88-244 356-500 (521)
264 PF00854 PTR2: POT family; In 97.8 0.00046 1E-08 65.2 13.4 107 113-235 2-121 (372)
265 KOG3880 Predicted small molecu 97.7 0.0005 1.1E-08 60.1 11.5 333 84-444 64-403 (409)
266 PF07672 MFS_Mycoplasma: Mycop 97.7 0.0021 4.5E-08 55.3 14.4 249 166-441 2-264 (267)
267 PF06813 Nodulin-like: Nodulin 97.7 0.00027 5.8E-09 61.6 8.9 130 312-445 26-157 (250)
268 PF05978 UNC-93: Ion channel r 97.6 0.0099 2.1E-07 47.7 15.8 104 333-444 47-150 (156)
269 PF05631 DUF791: Protein of un 97.4 0.031 6.8E-07 50.9 18.5 124 317-448 63-192 (354)
270 PF03092 BT1: BT1 family; Int 97.1 0.0013 2.9E-08 63.2 7.5 149 84-241 257-417 (433)
271 PF02487 CLN3: CLN3 protein; 97.1 0.0063 1.4E-07 56.8 11.3 107 84-194 283-395 (402)
272 TIGR00926 2A1704 Peptide:H+ sy 97.1 0.0075 1.6E-07 60.8 12.6 129 318-446 18-151 (654)
273 PF12832 MFS_1_like: MFS_1 lik 97.0 0.01 2.2E-07 41.2 9.1 67 288-361 6-72 (77)
274 KOG2563 Permease of the major 97.0 0.0056 1.2E-07 57.0 9.6 127 318-446 75-203 (480)
275 PF06963 FPN1: Ferroportin1 (F 97.0 0.013 2.8E-07 55.7 12.4 129 60-194 277-416 (432)
276 KOG3097 Predicted membrane pro 96.8 0.39 8.4E-06 43.2 18.5 100 93-193 69-180 (390)
277 KOG2325 Predicted transporter/ 96.7 0.01 2.2E-07 56.7 9.0 125 318-444 66-190 (488)
278 KOG3098 Uncharacterized conser 96.6 0.074 1.6E-06 50.8 14.1 145 43-193 242-411 (461)
279 PF03137 OATP: Organic Anion T 96.5 0.00049 1.1E-08 67.7 -0.8 132 313-445 28-203 (539)
280 PRK03612 spermidine synthase; 96.1 0.45 9.8E-06 47.0 17.0 139 49-195 22-170 (521)
281 KOG2601 Iron transporter [Inor 96.0 0.12 2.6E-06 47.1 11.3 150 41-195 27-200 (503)
282 TIGR00769 AAA ADP/ATP carrier 95.8 0.99 2.2E-05 43.7 17.7 125 321-445 41-191 (472)
283 PF06779 DUF1228: Protein of u 95.7 0.15 3.3E-06 35.8 8.7 71 297-374 7-77 (85)
284 TIGR00939 2a57 Equilibrative N 95.6 0.25 5.3E-06 47.6 12.8 109 84-193 309-431 (437)
285 PRK03612 spermidine synthase; 95.5 1 2.2E-05 44.5 16.8 130 318-451 45-178 (521)
286 PF01733 Nucleoside_tran: Nucl 95.3 0.0058 1.3E-07 55.9 0.6 54 386-439 251-304 (309)
287 COG0477 ProP Permeases of the 95.0 1.4 3.1E-05 39.7 15.7 118 323-445 39-158 (338)
288 PF01770 Folate_carrier: Reduc 94.1 3.7 8E-05 38.9 15.7 123 318-447 35-157 (412)
289 PF01733 Nucleoside_tran: Nucl 94.0 0.018 4E-07 52.7 0.5 107 86-192 186-306 (309)
290 KOG4830 Predicted sugar transp 93.4 0.021 4.5E-07 49.0 -0.1 67 43-115 19-94 (412)
291 KOG3626 Organic anion transpor 92.5 0.16 3.5E-06 51.1 4.5 156 313-469 122-331 (735)
292 KOG1479 Nucleoside transporter 91.5 1.4 3.1E-05 41.2 9.0 109 82-192 282-401 (406)
293 KOG0637 Sucrose transporter an 89.6 1.9 4.1E-05 40.9 8.1 111 85-195 335-469 (498)
294 PF00854 PTR2: POT family; In 86.8 1.4 2.9E-05 41.7 5.6 95 355-449 2-102 (372)
295 PF07672 MFS_Mycoplasma: Mycop 84.3 3 6.5E-05 36.5 5.9 101 84-185 143-254 (267)
296 PF13000 Acatn: Acetyl-coenzym 77.7 26 0.00056 34.2 10.0 56 140-195 410-466 (544)
297 KOG3574 Acetyl-CoA transporter 76.8 33 0.00072 32.2 10.0 39 402-440 152-190 (510)
298 KOG3880 Predicted small molecu 76.2 12 0.00025 33.9 6.9 75 119-193 326-401 (409)
299 COG5336 Uncharacterized protei 72.9 8.3 0.00018 28.2 4.2 49 85-155 45-93 (116)
300 PF03219 TLC: TLC ATP/ADP tran 71.9 1.1E+02 0.0023 30.3 18.1 124 321-444 56-205 (491)
301 TIGR02230 ATPase_gene1 F0F1-AT 70.9 24 0.00052 25.8 6.3 29 341-369 60-88 (100)
302 KOG4332 Predicted sugar transp 68.8 33 0.00072 30.4 7.8 97 84-180 284-390 (454)
303 PF07857 DUF1632: CEO family ( 66.8 80 0.0017 27.9 9.9 20 220-239 119-138 (254)
304 PF11947 DUF3464: Protein of u 62.5 51 0.0011 26.3 7.2 39 395-433 106-144 (153)
305 KOG1237 H+/oligopeptide sympor 57.8 1.9E+02 0.0042 29.2 12.1 131 318-448 68-223 (571)
306 KOG3810 Micronutrient transpor 55.1 46 0.00099 30.9 6.5 97 81-177 270-369 (433)
307 KOG2601 Iron transporter [Inor 54.5 1.5E+02 0.0032 28.1 9.6 41 417-457 173-213 (503)
308 PF11085 YqhR: Conserved membr 53.5 1.2E+02 0.0026 24.6 8.8 68 302-371 47-116 (173)
309 COG2233 UraA Xanthine/uracil p 52.2 1.6E+02 0.0035 28.5 9.9 126 39-172 14-143 (451)
310 COG3559 TnrB3 Putative exporte 50.9 2.3E+02 0.005 27.1 20.0 29 319-347 340-368 (536)
311 PF02694 UPF0060: Uncharacteri 49.3 48 0.001 24.4 4.7 50 84-133 56-105 (107)
312 PF07760 DUF1616: Protein of u 48.4 2.1E+02 0.0046 25.9 12.0 57 138-194 22-78 (287)
313 PF02990 EMP70: Endomembrane p 45.1 3.3E+02 0.0072 27.2 12.3 26 326-352 300-325 (521)
314 COG4769 Predicted membrane pro 45.1 29 0.00062 27.8 3.3 52 90-147 81-132 (181)
315 PF06912 DUF1275: Protein of u 44.5 2E+02 0.0043 24.4 13.0 31 165-195 157-187 (209)
316 PRK02237 hypothetical protein; 43.3 78 0.0017 23.5 5.0 50 84-133 58-107 (109)
317 PF09527 ATPase_gene1: Putativ 43.2 84 0.0018 19.8 6.0 32 336-367 13-44 (55)
318 COG5336 Uncharacterized protei 41.0 1.5E+02 0.0032 22.0 6.0 30 334-363 53-82 (116)
319 COG1268 BioY Uncharacterized c 40.2 78 0.0017 26.3 5.2 25 88-112 88-112 (184)
320 PF11947 DUF3464: Protein of u 39.2 1E+02 0.0022 24.7 5.5 52 133-186 95-146 (153)
321 COG2119 Predicted membrane pro 38.4 2.3E+02 0.005 23.5 8.5 37 91-127 143-179 (190)
322 PF02632 BioY: BioY family; I 36.4 1.1E+02 0.0023 24.5 5.4 39 89-127 60-98 (148)
323 TIGR00267 conserved hypothetic 35.9 85 0.0019 25.7 4.9 23 96-118 127-149 (169)
324 COG4262 Predicted spermidine s 34.3 4E+02 0.0087 25.0 10.7 185 281-472 6-192 (508)
325 PRK11469 hypothetical protein; 34.0 2.8E+02 0.0061 23.2 17.2 50 319-368 130-179 (188)
326 PRK11469 hypothetical protein; 32.0 2.6E+02 0.0056 23.4 7.2 76 39-127 104-180 (188)
327 COG3162 Predicted membrane pro 30.2 2.2E+02 0.0047 20.8 5.5 39 275-313 15-55 (102)
328 COG3619 Predicted membrane pro 29.8 3.7E+02 0.0081 23.3 15.8 28 84-111 57-84 (226)
329 PF03547 Mem_trans: Membrane t 29.0 3.3E+02 0.0071 25.7 8.5 18 177-194 102-119 (385)
330 COG1971 Predicted membrane pro 28.8 3.5E+02 0.0076 22.6 17.7 26 343-368 156-181 (190)
331 COG1230 CzcD Co/Zn/Cd efflux s 28.5 4.5E+02 0.0099 23.9 11.5 71 46-128 30-103 (296)
332 PF06341 DUF1056: Protein of u 28.4 1.2E+02 0.0026 20.0 3.5 36 134-169 27-62 (63)
333 TIGR00801 ncs2 uracil-xanthine 25.3 6.2E+02 0.013 24.4 10.9 97 69-172 31-132 (415)
334 PF07857 DUF1632: CEO family ( 25.3 2.4E+02 0.0052 25.0 6.1 21 42-62 181-201 (254)
335 TIGR03644 marine_trans_1 proba 24.9 6.3E+02 0.014 24.3 10.9 46 143-189 297-343 (404)
336 COG3202 ATP/ADP translocase [E 23.8 7.2E+02 0.016 24.6 15.5 126 320-446 58-211 (509)
337 PF10785 NADH-u_ox-rdase: NADH 23.6 2.1E+02 0.0045 20.3 4.5 39 96-134 32-77 (86)
338 PF11299 DUF3100: Protein of u 23.3 1.2E+02 0.0026 26.2 3.7 50 140-190 176-226 (241)
339 PF04346 EutH: Ethanolamine ut 22.6 6.4E+02 0.014 23.6 13.6 106 84-190 49-161 (354)
340 TIGR00366 conserved hypothetic 22.4 4.6E+02 0.01 25.4 7.7 30 416-445 391-420 (438)
341 PF11151 DUF2929: Protein of u 22.1 2.3E+02 0.005 18.2 6.0 28 212-239 28-55 (57)
342 TIGR02840 spore_YtaF putative 21.9 5E+02 0.011 22.1 16.1 32 319-350 153-184 (206)
343 PF02667 SCFA_trans: Short cha 21.8 4.5E+02 0.0098 25.6 7.6 14 98-111 76-89 (453)
344 PF03741 TerC: Integral membra 20.4 5.1E+02 0.011 21.6 15.3 40 156-195 18-57 (183)
345 PLN02878 homogentisate phytylt 20.1 4E+02 0.0087 24.0 6.5 72 108-179 195-266 (280)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-35 Score=264.82 Aligned_cols=357 Identities=20% Similarity=0.209 Sum_probs=281.8
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhH
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (473)
+..+..++.+.++.|............+|++.+|+|.+..+ .|+..++|.++..+++|+...+.||+.||++++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl 82 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLL 82 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH
Confidence 34567788888899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+.++.++.+++++++||+.++++|++.|+..|.+.+. .++.+++.|+++|++++++...+..++.++|.+++.++.+
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999999999886 9999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCc
Q 011997 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (473)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
.+|||..| ...+..+++.+ ..+..+| |++.+++.+. +...
T Consensus 163 -------~~GWR~~F---------~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~---------------------~~~~ 203 (394)
T COG2814 163 -------LFGWRATF---------LAIAVLALLALLLLWKLLP--PSEISGSLPG---------------------PLRT 203 (394)
T ss_pred -------HhhHHHHH---------HHHHHHHHHHHHHHHHhCC--CccCCCCCCc---------------------chhH
Confidence 55655555 66666666654 4556677 2211111100 1112
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
..+++|+|.++...+..++....++...+++..++. +..|++....++.+..++++.++++. .++++.|| +.+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~-----~v~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLE-----SVAGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHH-----HccCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cch
Confidence 456889999999999888888777777666665544 44699999999999999999999999 56666666 777
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (473)
+.+.....+..+....+.+... +.+. .....++.++..............+ .-++.+..+.+++....++|.++
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~~~----~~~~-~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 277 RALIAALLLLALALLALTFTGA----SPAL-ALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc----hHHH-HHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH
Confidence 7777776666666655544321 2222 2222222333333333334444444 33589999999999999999999
Q ss_pred hhhhhhHHHHHhhhccc
Q 011997 435 GPAGGGALFSWAQKRLD 451 (473)
Q Consensus 435 ~~~~~g~l~~~~g~~~~ 451 (473)
|..++|.++|+.|....
T Consensus 351 GA~lGG~v~~~~g~~~~ 367 (394)
T COG2814 351 GAALGGLVLDALGYAAT 367 (394)
T ss_pred HHHHHHHHHHhhchHHH
Confidence 99999999999765543
No 2
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.3e-34 Score=279.11 Aligned_cols=376 Identities=15% Similarity=0.086 Sum_probs=281.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+..+..+++..++..++.++.+..+|.+.+|+|.+.++ .+|+.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44566788899999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhc-cccchhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 197 (473)
.++.++++++++++|++.++++|+++|++.+...+. ...+.+.+ |+++|++++++......+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999998887775 67776665 78999999999999999999999999999998
Q ss_pred ccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHH---------HhhHhH------
Q 011997 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYD---------ALESAS------ 261 (473)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~------ 261 (473)
++|||+.| .+.....++. ++..+.+||++++++++.+....... ...+..
T Consensus 157 -----~~gwr~~f---------~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 -----HFYWGSVF---------LINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred -----cCChHHHH---------HHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 56666555 4444333333 34445677765432222211111000 000000
Q ss_pred ----------------HHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhH
Q 011997 262 ----------------AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (473)
Q Consensus 262 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
....|.+.+++....+++|+|.+....+..++..........++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 001122233344456788999888777776666665556666667665543 58999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011997 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLF 405 (473)
Q Consensus 326 g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
|..+.+..++..++.+ ..+++.||.++|+.+..+..+..++..++..... ....+. .....++.+++.+...+...
T Consensus 298 g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~--~~~~~~-~~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 298 GMFMLPVMVASGFSGP-IAGILVSRLGLRLVATGGMALSALSFYGLAMTDF--STQQWQ-AWGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC--CCchHH-HHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999988 4555666778888877777766666555443321 112222 23334444555556666677
Q ss_pred HhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 406 ILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 406 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
....+.+|+++++.+.++.++.+++|+.+|+.+.|.++++.
T Consensus 374 ~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 374 SAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777899999999999999999999999999999998864
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=8.8e-35 Score=288.53 Aligned_cols=384 Identities=16% Similarity=0.137 Sum_probs=275.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
++.+.++.+...++...+...+|.+.++++.+..+ .+++.+++.++.+++++++|+++||+|||+++++++++.
T Consensus 169 ~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 169 FFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33555666677778888889999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 201 (473)
+++.++++++++++.++++|++.|++.|...+. .+++.|++|+++|++.+++...+..+|.++++.++..+..
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~------ 316 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP------ 316 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred Cccccccc----ccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhh--HHHhhHh---------------
Q 011997 202 NLFSSESL----FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALESA--------------- 260 (473)
Q Consensus 202 ~~~gw~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~--------------- 260 (473)
.+||+.. +...+||..+.+.+++.++.++..+++||+|++...+.+.++.. .+.+...
T Consensus 317 -~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~ 395 (742)
T TIGR01299 317 -HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVN 395 (742)
T ss_pred -hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHH
Confidence 5666542 22457899888888888877888889999998744332221111 0100000
Q ss_pred --HHHhhhh-----hcccC------------------CccccccccchhHHHH---HHHHHHHhhhhhhhHHHHHhhcCc
Q 011997 261 --SAEVKEE-----EGREA------------------TPKKSLLKNWPLMSSI---IVYCVFSLHDMAYSEIFSLWANSP 312 (473)
Q Consensus 261 --~~~~~~~-----~~~~~------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 312 (473)
.....++ ++... ..++.+++.+..+..+ +..++..+.+.++..++|..+...
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~ 475 (742)
T TIGR01299 396 HIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHL 475 (742)
T ss_pred HHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00000 0233455554444333 344444455566666777543110
Q ss_pred ----------------cc--------c------C--------C-------------------------------------
Q 011997 313 ----------------KK--------L------G--------G------------------------------------- 317 (473)
Q Consensus 313 ----------------~~--------~------~--------~------------------------------------- 317 (473)
.. . . +
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 555 (742)
T TIGR01299 476 QADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTL 555 (742)
T ss_pred HHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhh
Confidence 00 0 0 0
Q ss_pred ---------------------------CCC-------ChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHH
Q 011997 318 ---------------------------LNY-------STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (473)
Q Consensus 318 ---------------------------~~~-------~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
.+. +.........+.+++.+++.+ +.+++.||+|||+++..+.++
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~i-l~g~L~Dr~GRr~~l~~~~~l 634 (742)
T TIGR01299 556 FENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNI-VSALLMDKIGRLRMLAGSMVL 634 (742)
T ss_pred ccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHH
Confidence 000 001123445566788888888 566666778999999888888
Q ss_pred HHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
..++.+++.+... ... +++..++.+++.....+....+++|.+|++.|++++|+.+....+|.+++|.++|.+.
T Consensus 635 sai~~ll~~~~~s-----~~~-ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 635 SCISCFFLSFGNS-----ESA-MIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred HHHHHHHHHHHcc-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766554321 111 2222334445556677888899999999999999999999999999999999999988
Q ss_pred HHh
Q 011997 444 SWA 446 (473)
Q Consensus 444 ~~~ 446 (473)
+..
T Consensus 709 ~~~ 711 (742)
T TIGR01299 709 GIT 711 (742)
T ss_pred Hhh
Confidence 753
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.1e-34 Score=274.75 Aligned_cols=384 Identities=14% Similarity=0.069 Sum_probs=267.6
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
.+++.+..+++..++++++....+...|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 3456667788888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.++++++.+++++++|++.+++.|+++|++.+...|. ..++.|++|+++|++++++++....+|..+++.+++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998888776 78899999999999999999999999999999999988641
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCc-chhhhHHHhhHhHHHhhhhh---ccc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDD-SCDVSYDALESASAEVKEEE---GRE 271 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~ 271 (473)
.. .....|||+.| .+.++..++. .+..+++||+|++.+...+ +++...+..+....+.++.+ ++.
T Consensus 159 ~~-~~~~~gwr~~f---------~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T TIGR02332 159 DG-LMALKGWQWLF---------LLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHA 228 (412)
T ss_pred CC-CCCccchhHHH---------HHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 00 00124555444 6655555443 4455677888754321111 11111011110000000000 000
Q ss_pred C----CccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 272 A----TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 272 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
+ ..++++ +++.++...+.+++.......+..+.|.++... +.+++..+++.......++.+++.+ ..+++
T Consensus 229 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l 302 (412)
T TIGR02332 229 AMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRH 302 (412)
T ss_pred cccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHH
Confidence 0 112233 356777777777777666777778888877531 2467788899999999999999988 56666
Q ss_pred HHhhhhhHH-HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH
Q 011997 348 ERILGPIMV-ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (473)
Q Consensus 348 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (473)
.||+++|+. .........+.... ... ... ...... .......+.....+.......+.+|+++|+++.|+.+.
T Consensus 303 ~dr~~~r~~~~~~~~~~~~~~~~~-~~~--~~~--~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 303 SDRLKERKHHTALPYLFAAAGWLL-ASA--TDH--NLIQLL-GIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred hcccCccHHHHHHHHHHHHHHHHH-HHh--cCC--HHHHHH-HHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 667775553 33333333322211 111 111 111111 11111112222233344555677899999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHhhhc
Q 011997 427 GMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 427 ~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
..++|++++|.+.|.+.|..|++
T Consensus 377 ~~~~g~~~~p~~~g~i~~~~g~~ 399 (412)
T TIGR02332 377 TGNIGSALSPFLIGILKDATGSF 399 (412)
T ss_pred hhhhhhhhhhhhcccccccCCCC
Confidence 99999999999999999987653
No 5
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2e-34 Score=269.16 Aligned_cols=338 Identities=15% Similarity=0.059 Sum_probs=242.8
Q ss_pred hhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc
Q 011997 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (473)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 132 (473)
+......+.+.+|.+.+|+|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++..+......+.......
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 76 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP 76 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh
Confidence 3455667889999999999999999 9999999999999999999999999999998776655555544333444
Q ss_pred ccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccC
Q 011997 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (473)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~ 212 (473)
++++.++++|+++|++.+...+....++|++|+|+|++++++.+.+..+|.++++++++++.+ .+|||+.|
T Consensus 77 ~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~gWr~~f-- 147 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGGLQLLI-- 147 (368)
T ss_pred ccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccchHHHH--
Confidence 799999999999999988765566677999999999999999999999999999999999987 45555444
Q ss_pred CcchhHHHHHHHHHHH-HHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHH
Q 011997 213 FPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 291 (473)
Q Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (473)
...++++++ .++..+++||+|++++++.+ .. +. .+.+++++|+|.++...+.+
T Consensus 148 -------~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~---~~---------~~-------~~~~~~ll~~~~~~~~~~~~ 201 (368)
T TIGR00903 148 -------IPIAAVAAAGIILVLAALPALPFQAAEGFG---FK---------DA-------VKEFGALAGRKDLWIIGAIL 201 (368)
T ss_pred -------HHHHHHHHHHHHHHHHHcCCCCCCCCCCcc---hH---------HH-------HHHHHHHHcChhHHHHHHHH
Confidence 564555444 34556678988754321110 00 00 01246788999999999998
Q ss_pred HHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHH
Q 011997 292 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 371 (473)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (473)
++.......+..+.|.|+.. .|++.. .+.......+.+.++.....++.+|+..|+...........+....+
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRP------AGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899988743 245544 56666666666666665566666554223332332333332222222
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 372 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
... . .... ......+.+++.....+..+++.+|.+|++.||++.|+.+...++++.++|.+.+.+..
T Consensus 275 ~~~---~--~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 275 AFE---L--NRLA-LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS 341 (368)
T ss_pred HHc---c--ccHH-HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 211 1 1112 12222333344555666788899999999999999999999999999999999998883
No 6
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1e-33 Score=271.44 Aligned_cols=381 Identities=15% Similarity=0.147 Sum_probs=265.0
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhH
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (473)
+.+++.+...++..+.+.++.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34566677888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.++.+++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.+....+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887775 8999999999999999999999999999999999999886
Q ss_pred ccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHh---hhhhcccC
Q 011997 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV---KEEEGREA 272 (473)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 272 (473)
..+ .+|+..+.+.++..++.++....+||++++.++++++++ ..+..++...+. ++..++..
T Consensus 162 -------~~~-------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 -------VWG-------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred -------hcC-------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhh
Confidence 222 124555566555555555555667776543221111100 000000000000 00000000
Q ss_pred Ccccccccc-ch-hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 273 TPKKSLLKN-WP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 273 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
...++..++ +. +...................++|.|.. ++.|++..+.+...+..+++.+++.+ ..+++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLK-----ADLGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 000111111 11 111222222222222333344555543 23588999999999999999999988 55666677
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH
Q 011997 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (473)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (473)
.+||+.+..+.....+........ ....+. ..+...+.+.......+......+|.+|+++|+++.|+.+...++
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQLLIIPVFAI----GANVAV-LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL 375 (405)
T ss_pred hCchhhhHHHHHHHHHHHHHHHHh----CCchHH-HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence 888888776665543322222111 111222 222223333444455566777888999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHhhhc
Q 011997 431 FKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~~ 449 (473)
|..++|.+.|.+.|+.|.+
T Consensus 376 g~~~g~~~~g~l~~~~g~~ 394 (405)
T TIGR00891 376 GGALAPIIGALLAQRLDEY 394 (405)
T ss_pred HHHHHHHHHHHHHHhcccc
Confidence 9999999999999998853
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.3e-34 Score=275.18 Aligned_cols=366 Identities=16% Similarity=0.127 Sum_probs=262.2
Q ss_pred HHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhh
Q 011997 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (473)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~ 130 (473)
.+..++...+....|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 456677788888899999999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccc
Q 011997 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (473)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~ 209 (473)
++++++.++++|++.|++.+...+. ..++.|++|+++|++.+++.+....+|..++|.+++.+.+ ..+
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~---- 146 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------HFS---- 146 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------hCC----
Confidence 9999999999999999998888775 9999999999999999999999999999999999999887 344
Q ss_pred ccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHH
Q 011997 210 FGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 288 (473)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (473)
|+..+...++..++..+ ..+..||++++.+..+++++....+....+.+.+++++......++.+|+|+++...
T Consensus 147 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
T TIGR00893 147 -----WQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLA 221 (399)
T ss_pred -----chHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHH
Confidence 44444555555544433 334456655432221111111000000000001111222334456788899988888
Q ss_pred HHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHH-HHHHHHHHHHH
Q 011997 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPL 367 (473)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 367 (473)
+..++..........+.|.|... ..|.+..+.+.......++.+++.+ ..+++.||.+||+. ...........
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQ-----ERGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHH-----HhcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHHHHHHHH
Confidence 88777777777777777776543 2588899999999999999999988 45555566676641 11111111111
Q ss_pred ---HhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 368 ---LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
......... .......... ....+.+..+..+....+..|..|+++|+++.|+.+...++|..++|.+.|.+.|
T Consensus 296 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~ 372 (399)
T TIGR00893 296 GLVLSLLMFATN--YVNIPYAALA-LVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA 372 (399)
T ss_pred HHHHHHHHHHhc--cchhHHHHHH-HHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc
Confidence 111111110 0111111222 2222233334678889999999999999999999999999999999999999999
Q ss_pred Hhh
Q 011997 445 WAQ 447 (473)
Q Consensus 445 ~~g 447 (473)
..|
T Consensus 373 ~~g 375 (399)
T TIGR00893 373 TTG 375 (399)
T ss_pred CCC
Confidence 877
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=9.1e-35 Score=282.33 Aligned_cols=372 Identities=15% Similarity=0.082 Sum_probs=254.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
+....+..++.++++..+++..|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.+++
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 33566677777889999999999999999999999 999999999999999999999999999999998888887
Q ss_pred HHHHHHhhc-----cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 123 ~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
++..+..+. +++++.+++.|+++|++.+...|. .++++|++|+++|++++++.+.+.++|.++++.+..++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~- 183 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN- 183 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH-
Confidence 777666554 689999999999999998887775 8899999999999999999999999999999999877654
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCC-c
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-P 274 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 274 (473)
.+ + ..+|+..+...++..++. ++.+++.+|+|++.+..++++ ...+....+.++.++++..... .
T Consensus 184 ------~~-----~-~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 250 (467)
T PRK09556 184 ------YF-----F-DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQIF 250 (467)
T ss_pred ------hh-----c-cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHHH
Confidence 11 0 012333334444444433 334445566554322111110 0000000000000000000000 1
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
.++.+|+|.++...+..++..........+.|.|+.. .+|++..+++.......++.+++.+ ..+++.||.++|
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-----~~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~g~r 324 (467)
T PRK09556 251 VEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-----ELGFSKEDAINTFTLFEIGALVGSL-LWGWLSDLANGR 324 (467)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCC
Confidence 1236789999988888777776666677788877643 3589999999999988999999988 666677777877
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH-HHH
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKA 433 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ 433 (473)
+..........+....+.. .. ....+. ..+..+..+....+..........|.+|++.+|++.|+.+...++ |.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~ 400 (467)
T PRK09556 325 RALVACIALALIIFTLGVY-QH--ATSEYM-YLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDS 400 (467)
T ss_pred chHHHHHHHHHHHHHHHHH-Hh--cCcHHH-HHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHH
Confidence 7655443333322221111 11 111111 222222222222222223345666899999999999999999997 779
Q ss_pred hhhhhhhHHHH
Q 011997 434 AGPAGGGALFS 444 (473)
Q Consensus 434 ~~~~~~g~l~~ 444 (473)
++|.+.|.+.|
T Consensus 401 ~~~~~~G~i~~ 411 (467)
T PRK09556 401 FAKVGLGMIAD 411 (467)
T ss_pred HHhhhHHHHhc
Confidence 99999999999
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-35 Score=260.19 Aligned_cols=374 Identities=17% Similarity=0.126 Sum_probs=292.3
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
++++.++.+++++...++.+..+....|.+.+|.++|.+| .|++.+.+.+.|.++..+.|.++||.+.|+.+-.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 3445556788888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH--HHhc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLA 194 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~--~~l~ 194 (473)
++++.++..++++++++.+.+.+..++.|..+|...| +...++.|++++|||+..++.+.+.++|..+.|++. +++.
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999777 599999999999999999999999999999999999 8887
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHh-hhhhcc--
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV-KEEEGR-- 270 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 270 (473)
. +.+||..| ++.++.+++. ++.++..+|+|+...-.+-++ ..++..+. ++++++
T Consensus 180 ~-------~~~w~~~f---------~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~------~~~d~~e~~~~~~~~~~ 237 (448)
T COG2271 180 F-------HGGWRAAF---------YFPGIIAIIVALILLFLLRDRPQSEGLPPIEE------YRGDPLEIYEEEKENEG 237 (448)
T ss_pred h-------ccchhHHH---------HHHHHHHHHHHHHHHHHhCCCccccCCCCHHH------hhcCchhhhhhhccCCC
Confidence 6 44555544 6666666554 566677888876543322111 11111111 111111
Q ss_pred ---cCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 271 ---EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 271 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
.+.-.+.+++||.+|...+..++....-.+...|.|+|+.+. .|++..+++...+..-.+++++.++.+...
T Consensus 238 ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~Ll~GwlS 312 (448)
T COG2271 238 LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTLLAGWLS 312 (448)
T ss_pred ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 122356788999999999999999999999999999998754 589999999999999999999999555555
Q ss_pred HHhh-hhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH
Q 011997 348 ERIL-GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (473)
Q Consensus 348 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (473)
||.+ |||....+...+.....++..+... . ..+....++.++.|+...+-+-.......|..|++..|++.|+...
T Consensus 313 DklfkgrR~p~~~i~~~~i~~~~~~~w~~~--~-~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 313 DKLFKGRRGPMALIFMLLITASLVLYWLAP--N-GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHcCC--C-ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 5544 5555544444333333333322211 1 2334445555555666666666677788899999999999999999
Q ss_pred HHHH-HHHhhhhhhhHHHHHhh
Q 011997 427 GMSL-FKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 427 ~~~~-g~~~~~~~~g~l~~~~g 447 (473)
+.++ |.+.+....|++.|..|
T Consensus 390 f~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 390 FAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred HHHHhhHHhcCCcceeeEecCC
Confidence 9999 99999999999998844
No 10
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=4.4e-35 Score=255.39 Aligned_cols=382 Identities=37% Similarity=0.575 Sum_probs=280.7
Q ss_pred hhhhhhHHHHHHHhcccccchh--hhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 58 SSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
+...+......++|+.-..+.+ ...+.|.+.+.+.+.+.+.++.+|.++||+|||++++.+++..++...+.+.++|+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F 121 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF 121 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555566667778876554444 66779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcc
Q 011997 136 WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (473)
..++++|++.|+..|...++.++++|++++|+|+++++..+...++|.++||.+|+++.++. ..++++++
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~----------~~~g~~p~ 191 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS----------SISGSYPF 191 (451)
T ss_pred HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH----------hhhccCch
Confidence 77778899999999999999999999999999999999999999999999999999998621 12235566
Q ss_pred hhHHHHHHHHHHH-HHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHH
Q 011997 216 FLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (473)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (473)
..|.+...+.+.. .....+++||+-+.+++. ++.....+..+.+ ++..+.........+||++....+..+...
T Consensus 192 alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~-~~~~~~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~ 266 (451)
T KOG2615|consen 192 ALPCLLVFILAAGDVTFFPWFLPETLPLRKRN-DEHSTLQEAADDR----LALLKFARIFKVAALRNPPLLDFISVLRIF 266 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccchhhc-ccccchhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHHHHH
Confidence 6666666666555 456678899997665544 1111111111111 111111111223456777666656666666
Q ss_pred HhhhhhhhHHHHHhhcCcccc--CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHH-HHHHHHHHHHHHhHH
Q 011997 295 SLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPLLTSY 371 (473)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 371 (473)
....+.+...++.|..+.... +++|+++.+.|.+++..++...+.+....+++++..+.... +......+...++.+
T Consensus 267 ~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~lll 346 (451)
T KOG2615|consen 267 GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLL 346 (451)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 666667777777776665444 67999999999999999999999998787777766544222 222222222222222
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccc
Q 011997 372 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 451 (473)
.. ......+.....+..+......+....++....|+++||+++|+......++.++||.+.|.++.+......
T Consensus 347 s~------~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~ 420 (451)
T KOG2615|consen 347 SL------ARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQP 420 (451)
T ss_pred hc------cccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCc
Confidence 22 122234556666666677778888999999999999999999999999999999999999999998877665
Q ss_pred cccccCCch
Q 011997 452 ASFLPGMMP 460 (473)
Q Consensus 452 ~~~~~~~~~ 460 (473)
.++.++...
T Consensus 421 a~~~~~~L~ 429 (451)
T KOG2615|consen 421 AYIAWGALL 429 (451)
T ss_pred eeeehHHHH
Confidence 555444433
No 11
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.1e-33 Score=265.40 Aligned_cols=355 Identities=16% Similarity=0.080 Sum_probs=267.9
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (473)
++...++..++.....+.+|.+..+++.+..+ .+++.+++.++..+++++.|+++||+|||++++.+..+..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 45677788888888999999999999999988 999999999999999999999999999999999999999988
Q ss_pred HHHhhccc-----cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 126 ~~~~~~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
.++..+++ +++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+....+|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88888777 9999999999999999988886 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (473)
..| |+..+...++..++..+..+.+++++++++++++.+++. .++.....+.++
T Consensus 154 ---~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ---TLG---------IKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ---Hhh---------HHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 344 444445555544444433333332211111111100000 000111345567
Q ss_pred ccchhHHHHHHHHHHHhhhhhhh-HHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
|+|.++...+..++......... .+.|.+... .+|.+..+.+......+++.+++.. ...+++||.+|++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-----YLGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-----HhCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHH
Confidence 88888877776666555544443 555655432 2588899999999999999999988 5567788888888877
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.+.....+......+... ......+..++.+++.....+....+..+.+|+++|+++.|+.+...+++..++|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTPP-----NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHhhch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766555555544443221 122334445555566666778888899999999999999999999999999999999
Q ss_pred hhHHHHHhh
Q 011997 439 GGALFSWAQ 447 (473)
Q Consensus 439 ~g~l~~~~g 447 (473)
.|.+.|+.|
T Consensus 357 ~g~l~~~~g 365 (365)
T TIGR00900 357 AGPLADHLG 365 (365)
T ss_pred HHHHHHHcC
Confidence 999999754
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1e-33 Score=272.35 Aligned_cols=374 Identities=14% Similarity=0.092 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+.....++..++..++...+.+.+|.+.+++|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 3344556667777777888889999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
+.+++.++++++++++.+++.|++.|++.|...+. .+++.|++|+++|++++++.+...++|..++|.+++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---- 172 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---- 172 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999988876664 8999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc-cc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK-KS 277 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (473)
.+|||+ .+.+.++..++. ++..+++||+|++...++.++... +. ++..++.++++.+..... ..
T Consensus 173 ---~~gw~~---------~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 238 (434)
T PRK11663 173 ---HYGWRY---------GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DA-LELAQQQEGAGLSRKEILTKY 238 (434)
T ss_pred ---cccHHH---------HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cc-cccchhccccCCChhhhHHHH
Confidence 445544 445555544433 344456777664322111100000 00 000000000000000011 12
Q ss_pred ccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh--h-hh
Q 011997 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--G-PI 354 (473)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~--~-~~ 354 (473)
.+|++.++...+..++..........+.|.|+.. .+|++..+.+...+...++.++++++.+ ++.||+ + |+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~a~~~~~~~~~~~~~g~~~~g-~l~dr~~~~~r~ 312 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE-----TLGVDLVTANSAVSMFELGGFIGALVAG-WGSDKLFNGNRG 312 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHHHh-hhHHHhccCCcc
Confidence 5677888877766666655555666677777532 3588999999999999999999998544 555554 2 22
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (473)
...........+....+.... .. .... .....+..+++.............|..|++.||++.|+.++..++|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 388 (434)
T PRK11663 313 PMNLIFAAGILLSVGSLWLMP-FA--SYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL 388 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-cc--cHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH
Confidence 222221111111111111111 11 1111 1112222222222222333456678899999999999999999999999
Q ss_pred hhhhhhHHHHHhhh
Q 011997 435 GPAGGGALFSWAQK 448 (473)
Q Consensus 435 ~~~~~g~l~~~~g~ 448 (473)
+|.+.|++.|+.|.
T Consensus 389 ~p~~~g~l~~~~g~ 402 (434)
T PRK11663 389 SGYPLAKVLEIWHW 402 (434)
T ss_pred hcccHHHHHHhccc
Confidence 99999999998774
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.2e-33 Score=265.76 Aligned_cols=351 Identities=15% Similarity=0.102 Sum_probs=251.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+..++.+.+..++.........+.+|.+.+|+|.+..+ .+++.+.+.+++.+++++.|+++||+||||++..+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 33444555555554444455667789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.+..++++.+++++|++.++++|+++|++.+...+. .+++.|++|+++|++++++.....++|..++|++++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~--- 158 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ--- 158 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---
Confidence 999999999999999999999999999998887775 8999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
.+|||+. +...++..++.. .....+||.+++++ + . .++.++
T Consensus 159 ----~~gw~~~---------f~~~~~~~~l~~~~~~~~~~~~~~~~~---~---~-------------------~~~~~~ 200 (390)
T PRK03545 159 ----YLGWRTT---------FLAIGGGALITLLLLIKLLPLLPSEHS---G---S-------------------LKSLPL 200 (390)
T ss_pred ----HhcHHHH---------HHHHHHHHHHHHHHHHHhCCCCCCCCc---c---h-------------------HHHHHH
Confidence 4455544 455555554443 33344565432110 0 0 012345
Q ss_pred ccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHH
Q 011997 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (473)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 357 (473)
.+|+|.++......++..........+.+.++. +..|++..+.+......+++.++++.+ .+++.||.+++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~g~s~~~~~~~~~~~~~~~~~g~~~-~g~l~dr~~~~~~~ 274 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQ-----QVAGLSENFATLLLLLFGGAGIIGSVL-FSRLGNRHPSGFLL 274 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCccHHHHHHHHHHHHHHHHHHH-HHHHhhccchhHHH
Confidence 778888776555544444333333344444432 335888999999999999999999984 55566666766543
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhh
Q 011997 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (473)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 437 (473)
.+..+.......+.... . .. ..+....++.+.......+.......+..| +.|+++.|+.+...++|..+||.
T Consensus 275 -~~~~~~~~~~~~l~~~~--~--~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~ 347 (390)
T PRK03545 275 -IAIALLLVCLLLLLPAA--N--SE-WHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGAL 347 (390)
T ss_pred -HHHHHHHHHHHHHHHHh--c--hH-HHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333322221111 1 11 222333334444444445555666667666 68899999999999999999999
Q ss_pred hhhHHHHHhhhcc
Q 011997 438 GGGALFSWAQKRL 450 (473)
Q Consensus 438 ~~g~l~~~~g~~~ 450 (473)
+.|.+.|+.|...
T Consensus 348 ~~G~~~~~~g~~~ 360 (390)
T PRK03545 348 LGNQVSLHLGLSS 360 (390)
T ss_pred HHHHHHhccChhH
Confidence 9999999987654
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.2e-33 Score=268.13 Aligned_cols=366 Identities=13% Similarity=0.055 Sum_probs=242.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcc---cccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
+.+...+++.+++.+|...+....|.+.+|++. +..+ ....+.+.+..+++..++++++|+++||+||||++..
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 344556677889999999999999999999863 3332 0013334455556666999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHH--------HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHH
Q 011997 118 GTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (473)
+.++++++++++++++++. .+++.|+++|++.|...+. .++++|++|+++|++..+..+.....|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998874 5899999999999888775 999999999999999999998888888888887
Q ss_pred HHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhh
Q 011997 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (473)
Q Consensus 189 i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (473)
+...+.....+ .. ...++||.++.+.++++++.......+||++++++++
T Consensus 179 ~~~~~~~~~~~-------~~-~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~---------------------- 228 (432)
T PRK10406 179 VVVVLQQTLED-------AE-LREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA---------------------- 228 (432)
T ss_pred HHHHHHHhCCH-------HH-HhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh----------------------
Confidence 76655421000 00 0034566666777776666555555566654321000
Q ss_pred cccCCccccccccchhHHHHHHHHHH-HhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 269 GREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
+++..+.++++|+++.+...+...+. ......+..+.|.|+.. .+|++..+.+.......+...+++.+. +++
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-----~~g~s~~~~~~~~~i~~~~~~i~~~~~-G~l 302 (432)
T PRK10406 229 LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVN-----TAGMHANVASGIMTAALFVFMLIQPLI-GAL 302 (432)
T ss_pred hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 00112356677787776655544332 34445556667766542 357888888888888788888887744 567
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHH
Q 011997 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (473)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (473)
.||.+||+......++..+....+...... .......+ ....+.........+....+.+|.+|++.|+++.|+.+..
T Consensus 303 ~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 303 SDKIGRRTSMLCFGSLAALFTVPILSALQN-VSSPYAAF-GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 777888887666554433322211111111 11111111 1111111222233345667889999999999999999887
Q ss_pred HHH-HHHhhhhhhhHHHHHhhh
Q 011997 428 MSL-FKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 428 ~~~-g~~~~~~~~g~l~~~~g~ 448 (473)
.+. .+...|.+.+. .+..|.
T Consensus 381 g~~~~g~~~p~~~~~-l~~~g~ 401 (432)
T PRK10406 381 ANALFGGSAEYVALS-LKSIGM 401 (432)
T ss_pred HHHHHHhHHHHHHHH-HHHhCC
Confidence 664 35557777774 455554
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.7e-33 Score=268.24 Aligned_cols=358 Identities=18% Similarity=0.129 Sum_probs=261.8
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
+++......+...+++.++.....+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 3445556777788889999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.++..++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998887775 8999999999999999999999999999999999988876
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
..+|+..+.+.++..++. .+...++||++++.++++++++.. . ..
T Consensus 165 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-----------------~~ 210 (406)
T PRK11551 165 ---------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA--P-----------------VL 210 (406)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh--h-----------------hH
Confidence 334444445554444333 334456788765432211110000 0 00
Q ss_pred ccccc---cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh
Q 011997 276 KSLLK---NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (473)
Q Consensus 276 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~ 352 (473)
+..++ .+..+......++..........+.|.+.. +.|+++.+.+.......++.+++++ ..+++.||.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (406)
T PRK11551 211 RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLV------GQGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLR 283 (406)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 00111 122222223333333333344445555543 2488899999999999999999988 4555666678
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHH
Q 011997 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 432 (473)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 432 (473)
+++.+..+.+...+....+.... ..+. ..+..++.++...+..+....+..|.+|+++|+++.|+.+....+|.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 284 PRRVVLLIYAGILASLAALAAAP-----SFAG-MLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGS 357 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-----cHHH-HHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHH
Confidence 88877765555444444332211 1222 22333444455556677788889999999999999999999999999
Q ss_pred HhhhhhhhHHHHHhhhc
Q 011997 433 AAGPAGGGALFSWAQKR 449 (473)
Q Consensus 433 ~~~~~~~g~l~~~~g~~ 449 (473)
.++|.+.|.+.++.+..
T Consensus 358 ~~g~~~~g~l~~~~~~~ 374 (406)
T PRK11551 358 MAGPLLAGQLLALGRST 374 (406)
T ss_pred HHHhhhHhhhhccCCch
Confidence 99999999999875543
No 16
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.5e-32 Score=267.93 Aligned_cols=375 Identities=14% Similarity=0.153 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
.+..++++.++..++.....+.+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 345667788889999999999999999999999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 011997 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (473)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 200 (473)
..++.++++++++++.++++|+++|++.+...+. .+++.|++|+++|++++++......+|..++|.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 9999999999999999999999999998887775 9999999999999999999999999999999999999988
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhH---------HHhhH----hH-----
Q 011997 201 PNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALES----AS----- 261 (473)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~----~~----- 261 (473)
++|||+.| .......++. ++..+..||+++..+++.+...... ....+ ..
T Consensus 152 --~~~w~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 --NYHWRWIF---------LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred --CcCceehh---------hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 66777665 3433333333 3334456664432222111110000 00000 00
Q ss_pred --------------HHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHH
Q 011997 262 --------------AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (473)
Q Consensus 262 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 327 (473)
...++.+++++....+++|+|+++...+..++..........+.|.|+... +|+++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 000112222333345678899888887777777776666667777776543 5889999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011997 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 407 (473)
Q Consensus 328 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
......++.+++.+ ..+++.||.+||+....+..+..++...+.+.... . ..........++.+++.....+.....
T Consensus 296 ~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~g~g~~~~~~~~~~~ 372 (485)
T TIGR00711 296 HILPVGLAPMLSSP-IAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP-D-TPFLAIALPQFIRGFGMGCFFMPLTTI 372 (485)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 45556677898888877776666665544321111 1 111222233344444444555555556
Q ss_pred hcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 408 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 408 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
..+..|+++++++.|+.+..+.+|+.+|+.+.|.+.++.
T Consensus 373 ~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 373 ALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667789999999999999999999999999999999754
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.6e-33 Score=268.34 Aligned_cols=366 Identities=16% Similarity=0.203 Sum_probs=258.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
++.+...++..+.+.++.....+..|.+.+++|.++.+ .+++.+++.+++.+++++.|+++||+|||+++..+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~ 90 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSI 90 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 45566777888888899999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
++.+++.++++++++++.++++|+++|++.+...+. ..++.|++|+|+|+++.++...+..+|.++++.+.+.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~--- 167 (426)
T PRK12307 91 VAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE--- 167 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc---
Confidence 999999999999999999999999999998877765 8899999999999999999999999999999999988887
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
.+|||+.| .+..+..++........||++++.+++.++++ ++.++..+......+++
T Consensus 168 ----~~~w~~~f---------~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 224 (426)
T PRK12307 168 ----AYGWRAAF---------FVGLLPVLLVIYIRARAPESKEWEEAKLSGKG----------KHSQSAWSVFSLSMKGL 224 (426)
T ss_pred ----cCCHHHHH---------HHHHHHHHHHHHHHHHCCCChHHHHhhhhccc----------cccccchhhhhHHHHHH
Confidence 45555444 44333322222222233443321111000000 00000000011235567
Q ss_pred cccchhHHHHHHHHHHHh---hhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH
Q 011997 279 LKNWPLMSSIIVYCVFSL---HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 355 (473)
+|++.++........... .......++|.|... .|+++.+.+...+...++.+++++ ..+++.||++|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~ 297 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGLKK 297 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHH
Confidence 777777654433322221 222234456655432 478888999999998999999988 5566677788888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhh
Q 011997 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (473)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 435 (473)
....+.++..+......... . ..........+..+....+..+.......|.+|++.||++.|+.+....+++.++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~g 373 (426)
T PRK12307 298 TFSIGLLMSFLFIFPLFRIP---Q-DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFN 373 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHc---c-ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHH
Confidence 87777766555443332221 1 1111111111111111222334455677899999999999999999999999999
Q ss_pred hhhhhHHHHHhhh
Q 011997 436 PAGGGALFSWAQK 448 (473)
Q Consensus 436 ~~~~g~l~~~~g~ 448 (473)
|.+.|++.++.|.
T Consensus 374 p~~~g~l~~~~g~ 386 (426)
T PRK12307 374 SMAATWLGITMGL 386 (426)
T ss_pred HHHHHHHHHcccH
Confidence 9999999998764
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.3e-32 Score=268.67 Aligned_cols=380 Identities=13% Similarity=0.071 Sum_probs=247.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhH-HHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+.+...+++.+++.+|...+....|.+.++++.+.++. .+....+ +.++..+++.++++++|+++||+|||+++.+++
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPS-VQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 44556778899999999999999999999997554331 0111111 257888999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHH--------HHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
++++++++++++++|+++ ++++|+++|++.|...+. .++++|++|+++|++..++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 899999999998887775 99999999999999999999988888888888776
Q ss_pred HHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcc
Q 011997 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (473)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (473)
..+.....+. ..- .++||.++.+.++++++.++....+||+|++.+.+++.++. . .+...++
T Consensus 175 ~~~~~~~~~~-------~~~-~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~--------~--~~~~~~~ 236 (490)
T PRK10642 175 VLISTIVGEA-------NFL-DWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG--------D--REGLQDG 236 (490)
T ss_pred HHHHHhcCHH-------Hhc-CccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh--------c--ccccccc
Confidence 6554211000 000 34566666776665555555566788876542211100000 0 0000001
Q ss_pred cCCcccccccc-chhHH-HHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHH
Q 011997 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (473)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~ 348 (473)
...++++++++ ++.+. .....++..........+.|.|+.. .+|++..+.+.......++.+++.+ ..+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH-----NLHYSEDHGVLIIIAIMIGMLFVQP-VMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 12234444443 22111 1122222333444555566666532 2477777777777777788888877 556677
Q ss_pred HhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHH
Q 011997 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (473)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (473)
||+|||+.+..+.+...+.......... .... ..+.+..++.++...........+..+.+|++.|+++.|+.+...
T Consensus 311 dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~ 387 (490)
T PRK10642 311 DRFGRRPFVILGSVALFVLAIPAFILIN--SNVI-GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNIS 387 (490)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHh--CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHH
Confidence 7789998877666543332222111111 1111 112222222223333334455666778899999999999876667
Q ss_pred HHHHHhhhhhhhHHHHHhhh
Q 011997 429 SLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~~g~ 448 (473)
.+++.++|.+.+++.+..+.
T Consensus 388 ~~~g~~~p~i~g~l~~~~~~ 407 (490)
T PRK10642 388 VLVAGLTPTLAAWLVESTQN 407 (490)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 78889999999999886653
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=5.9e-32 Score=256.38 Aligned_cols=349 Identities=17% Similarity=0.169 Sum_probs=249.7
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHH
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
.|+.+..+....+..........+.+|.+.+++|.++++ .++..+++.++..+++++.|+++||+|||++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 445555555555555555556667789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 011997 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (473)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 197 (473)
.++.+++.++++++++++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.....++|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999998888775 8899999999999999999999999999999999999998
Q ss_pred ccCCCcccccccccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccc
Q 011997 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (473)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
.+|||+.| .+.++.+++..+ .....||+++++++ + ....+
T Consensus 170 -----~~gw~~~f---------~~~~~l~~~~~l~~~~~~p~~~~~~~~-----~--------------------~~~~~ 210 (394)
T PRK10213 170 -----LIGWRNVF---------NAAAVMGVLCIFWIIKSLPSLPGEPSH-----Q--------------------KQNTF 210 (394)
T ss_pred -----hcCHHHHH---------HHHHHHHHHHHHHHHHHCCCCCccccc-----c--------------------hhHHH
Confidence 45555444 554444444332 23345664321100 0 01124
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhHHH-HHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH
Q 011997 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (473)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 355 (473)
+.+|+|.++...+..++..........++ |.+. +++|+++.+.+......+++.+++..+ .+++.||.++ +
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~g~s~~~~g~~~~~~~~~~iig~~~-~~~l~~r~~~-~ 282 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM------NLAGFGVDGLTLVLLSFGIASFVGTSL-SSFILKRSVK-L 282 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCCChhHHHHHHHHHHHHHHHHHHH-HHHHHhccch-h
Confidence 56788888776665555444444443443 3332 235889999999999999999999884 4555555443 3
Q ss_pred HHHHHHHH-HHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh
Q 011997 356 VARIAGVL-TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (473)
Q Consensus 356 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (473)
....+..+ ......+.... ...+. .....++.+++.....+.....+++..| ++++++.++.....++|..+
T Consensus 283 ~l~~~~~~~~~~~~~l~~~~-----~~~~~-~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~ 355 (394)
T PRK10213 283 ALAGAPLVLAVSALVLTLWG-----SDKIV-ATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC 355 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----hhHHH-HHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH
Confidence 33333332 22222222221 12222 2334444455555666667767777777 56778888888888999999
Q ss_pred hhhhhhHHHHHhhhc
Q 011997 435 GPAGGGALFSWAQKR 449 (473)
Q Consensus 435 ~~~~~g~l~~~~g~~ 449 (473)
||.++|.++|..|..
T Consensus 356 G~~l~G~l~~~~g~~ 370 (394)
T PRK10213 356 GAAIGGYALDNIGLT 370 (394)
T ss_pred HHHHHHHHHhccChh
Confidence 999999999987653
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.6e-32 Score=257.42 Aligned_cols=335 Identities=13% Similarity=0.051 Sum_probs=246.3
Q ss_pred hhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHH
Q 011997 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (473)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 136 (473)
.....+.+|.+.+|+|.+.++ .+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+++++|++
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~ 98 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSA 98 (393)
T ss_pred hhccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchH
Confidence 366779999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc-cccccccCCc
Q 011997 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF-SSESLFGKFP 214 (473)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~-gw~~~~~~~~ 214 (473)
.++++|+++|++.+...+. ..++.|++| ++|+++++.+..+...|..+++.+++++.+ +. +||+.+
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~-------~~~~w~~~~---- 166 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ-------HSETWYQTL---- 166 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCHHHHH----
Confidence 9999999999998887775 888899987 789999999999999999999999999887 32 455433
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHH
Q 011997 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (473)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (473)
....+..++.....+...+.+++.+++ ++...++.+++++.+...+...+.
T Consensus 167 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~~~~~~l~~~~~~~ 217 (393)
T PRK09705 167 -----AWWALPAVVALFAWWWQSAREVASSHK------------------------TTTTPVRVVFTPRAWTLGVYFGLI 217 (393)
T ss_pred -----HHHHHHHHHHHHHHHHHhcCCCccccC------------------------CCcCCcccccCHhHHHHHHHHHHH
Confidence 333333333222222222211110000 001223456677777666666665
Q ss_pred HhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHH
Q 011997 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (473)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (473)
.........+.|.++.+ +|.+..+.|...+..+++.++++. ..+++.||.+|++....+..+..++..++...
T Consensus 218 ~~~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 218 NGGYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHHHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHHHc
Confidence 55556666677766532 488999999999999999999998 56667788898888877776665555443322
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-CcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcccc
Q 011997 375 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA 452 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 452 (473)
.. . .... . . .+.+.+.....+.......+.. |+++++++.|+.+...++++.++|.+.|++.|+.|.....
T Consensus 291 ~~--~-~~~~-~-~--~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~ 362 (393)
T PRK09705 291 PL--Q-LPVL-W-A--MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMD 362 (393)
T ss_pred cc--h-HHHH-H-H--HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHH
Confidence 11 1 1111 1 1 1222333344455544444555 5688999999999999999999999999999998865443
No 21
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=4e-33 Score=264.84 Aligned_cols=371 Identities=14% Similarity=0.086 Sum_probs=257.7
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 011997 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (473)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~ 128 (473)
..+....+.....+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||++++.+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 45567778888889999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHH-HHHHHhccccccCCCcccc
Q 011997 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~i~~~l~~~~~~~~~~~gw 206 (473)
++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++| .+++.+.+ ..+|
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~ 149 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYSW 149 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCCc
Confidence 999999999999999999998887775 89999999999999999999999999999999 56666665 3444
Q ss_pred cccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhH
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (473)
|+ .+...++..++. ++..++.||++++.+.++++++.. ++.++..++.+++.+..+...++++|+|.++
T Consensus 150 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 150 HW---------VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred hh---------HHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHH
Confidence 44 345554444433 444555676654332211111110 0000000000111111122345677888888
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHH
Q 011997 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (473)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (473)
...+..++..........+.|.|... ..|+++.+.+.......++.+++.++.+...||+.++++..........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~ 294 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQ-----EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMAL 294 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 87777777666666666777776543 3588999999999999999999988555555443333332222111111
Q ss_pred HHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
.......... ... ..........+..+.......+.......|.+|++.|+++.|+.+....+|+.++|.+.|.+.|+
T Consensus 295 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 295 IIVSLLVYWL-NPA-ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred HHHHHHHHhc-Ccc-hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 1111111111 001 11112222233333334444555667788999999999999999999999999999999999998
Q ss_pred hhhc
Q 011997 446 AQKR 449 (473)
Q Consensus 446 ~g~~ 449 (473)
.|..
T Consensus 373 ~g~~ 376 (379)
T TIGR00881 373 FGWA 376 (379)
T ss_pred hccc
Confidence 7743
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=9.9e-33 Score=261.96 Aligned_cols=347 Identities=12% Similarity=0.071 Sum_probs=249.5
Q ss_pred HHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh
Q 011997 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (473)
..+.........+..|.+.+++|.+..+ .+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 12 MCFTSGYVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY 85 (377)
T ss_pred HHHHhhHHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence 3333334566788899999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccc
Q 011997 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (473)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~ 208 (473)
+++++++.++++|++.|++.+...+. ...+.|++| |+|+++.++.....++|..+++.+.+.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------- 151 (377)
T TIGR00890 86 AIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN------------- 151 (377)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-------------
Confidence 99999999999999999998876664 777888887 679999999999999998887777666665
Q ss_pred cccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHH
Q 011997 209 LFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (473)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (473)
..+||..+...++..++..+ ..++++|++++..+++++.+ +.....++.+|++.++..
T Consensus 152 ---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 210 (377)
T TIGR00890 152 ---LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVL 210 (377)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHH
Confidence 33445555666665555443 33445544332111110000 001123456778887766
Q ss_pred HHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHH
Q 011997 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (473)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (473)
.+..++............+.|. ++++.+..+.+...+...++.+++++ ..+++.||++||+.+..+.....++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 211 YLSFFLNAVSGLLLIGLYKPYG------QSLGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGISAVG 283 (377)
T ss_pred HHHHHHHhHHHHHHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 6655554444333333444332 23577888889999999999999988 5566667778888887777766666
Q ss_pred HhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhh
Q 011997 368 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 447 (473)
...+..... ..... ......+.+.......+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.++.|
T Consensus 284 ~~~~~~~~~---~~~~~-~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 359 (377)
T TIGR00890 284 MAAMLFIPM---LNDVL-FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG 359 (377)
T ss_pred HHHHHHccc---chhHH-HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 555443221 11111 11222223333334445566788899999999999999999999999999999999999876
Q ss_pred h
Q 011997 448 K 448 (473)
Q Consensus 448 ~ 448 (473)
.
T Consensus 360 ~ 360 (377)
T TIGR00890 360 F 360 (377)
T ss_pred h
Confidence 4
No 23
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.1e-31 Score=258.81 Aligned_cols=378 Identities=15% Similarity=0.123 Sum_probs=274.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
.+.++.+++..++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34566778888888999999999999999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.+.+++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|+++.++.....++|..++|.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999999999999999999999999998888775 8899999999999999999999999999999999999998
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHH---------hhHh--------
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDA---------LESA-------- 260 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~---------~~~~-------- 260 (473)
..|||+.| .+......+.. ......|+.+.... +.+........ .++.
T Consensus 160 ----~~gw~~~f---------~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 ----YASWHWIF---------LINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred ----hccHHHHH---------HHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 44555444 45444333333 33334444332211 11111000000 0000
Q ss_pred --------------HHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHH
Q 011997 261 --------------SAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (473)
Q Consensus 261 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 326 (473)
....++++.+++....+++|||+++...+..++..........+.|+|.+. ..|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-----GLGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHH
Confidence 000011122222333467899998887777777666555555566666543 2488999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011997 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFI 406 (473)
Q Consensus 327 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
+......++.+++.. ..+++.||+++|+.+..+..+..+...++.+... ....+ ......++.+.+.....+....
T Consensus 301 ~~~~~~~~~~~~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~g~~~~~~~~~~~~ 376 (471)
T PRK10504 301 LMMIPMVLGSMGMKR-IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL--LGWYY-LLPFVLFLQGMVNSTRFSSMNT 376 (471)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc--cccHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888777 4555667779988888777766666554443221 11111 1222233333444555666777
Q ss_pred hhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 407 LQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 407 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
...+.+|++.+++++|+.++...+|..+|+.+.|.+.+..+..
T Consensus 377 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 377 LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7788899999999999999999999999999999999988763
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=256.91 Aligned_cols=373 Identities=14% Similarity=0.104 Sum_probs=242.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHH-HHHHh--cccccchhhhhh-hhHHHHHHHHHHHHHhhhhhhhhcccCCchhh
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (473)
++......+..+++.+|...+....|. +.+++ +.++.+ ... .....++.+++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 344556677888999999988888775 45555 455432 110 11122455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccHH--------HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHH
Q 011997 116 IMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (473)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (473)
..+.+++++++++++++++++ .++++|+++|++.|...+. ..++.|++|+++|++..+..+.+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 5889999999999888775 8999999999999999999999999999998
Q ss_pred HHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhh
Q 011997 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (473)
Q Consensus 187 ~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (473)
+.+...+....... .+..++||.++.+.+++.++........||++++.+.+++.+
T Consensus 178 ~~~~~~l~~~~~~~--------~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~---------------- 233 (438)
T PRK09952 178 TGLVSLISMMTTDE--------QFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA---------------- 233 (438)
T ss_pred HHHHHHHHHhCCHH--------HhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc----------------
Confidence 88777765311000 000356677667776665544444445666654321110000
Q ss_pred hhcccCCccccccccchhHHHHH-HHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHH
Q 011997 267 EEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (473)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~ 345 (473)
+.++.....+.++|+|+.+.... ..++..........+.+.|... .+|++...........++..+++.+ ..+
T Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----~~g~s~~~~~~~~~~~g~~~~i~~~-~~g 307 (438)
T PRK09952 234 AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ-----NLGLPRELFLNIGLLVGGLSCLTIP-CFA 307 (438)
T ss_pred cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 00000011123456666555433 2333333334444566655432 3467776555555555666677766 566
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHH
Q 011997 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 425 (473)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 425 (473)
++.||++||+....+.++..+....+...... . ..........++.++......+..+++..|.+|++.|+++.|+.+
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEA-Q-SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc-C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 77778899888777665544433222221111 1 112222222333334444556677889999999999999999976
Q ss_pred HHH-HHHHHhhhhhhhHHHHHhh
Q 011997 426 TGM-SLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 426 ~~~-~~g~~~~~~~~g~l~~~~g 447 (473)
... .+++.++|.+.+++.+..+
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Confidence 554 5899999999999998654
No 25
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.9e-32 Score=265.21 Aligned_cols=376 Identities=16% Similarity=0.087 Sum_probs=251.0
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhccc--------ccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
..+..++..++...+.+..|.+.++++.+ ..+ .+++.+++.++..++++++|+++||+|||++++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 34455566777888888889888888877 555 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc---ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH---
Q 011997 118 GTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--- 190 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~--- 190 (473)
+.++..++.+++.+. .+++.+++.|+++|++.+...+. .++++|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888553 45668999999999998888775 89999999999999999999999999999999998
Q ss_pred HHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhh--HHHh-----------
Q 011997 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDAL----------- 257 (473)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~----------- 257 (473)
....+ ..+||..+.+.++..++.++..+++||+++....+++.++.. .++.
T Consensus 187 ~~~~~----------------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (481)
T TIGR00879 187 VSLNN----------------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL 250 (481)
T ss_pred hcCCC----------------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence 54444 334555556666666666666777888765321111111100 0000
Q ss_pred h---HhHHHhhhhhcccCCcccccccc------chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHH
Q 011997 258 E---SASAEVKEEEGREATPKKSLLKN------WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 328 (473)
Q Consensus 258 ~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 328 (473)
+ ......+.+.+.....+++.++. +.++...+..+...........+.+.+. ++.|++..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~ 324 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF------ENAGVSTDHAFLV 324 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH------HHcCCCchHHHHH
Confidence 0 00000000000001112222221 1112222222222221222222333322 3357888888888
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHHHHH
Q 011997 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-----GLAFLLNCASVVKNLLSVSIITG 403 (473)
Q Consensus 329 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
.....++.+++.+ ..+++.||.+||+....+..+..++...+......... ..+..+....+..+....+..+.
T Consensus 325 ~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (481)
T TIGR00879 325 SIIVGAVNFAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPV 403 (481)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCe
Confidence 8888889999888 55677777899888888776666665555432111111 02222233333333344444566
Q ss_pred HHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc
Q 011997 404 LFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 450 (473)
...+..|.+|++.|+++.|+.+...++|++++|.+.+.+.++.+...
T Consensus 404 ~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~ 450 (481)
T TIGR00879 404 PWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGG 450 (481)
T ss_pred ehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 77778999999999999999999999999999999999999866443
No 26
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.1e-31 Score=252.37 Aligned_cols=350 Identities=17% Similarity=0.204 Sum_probs=248.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+.++.+....++.........+.+|.+.+|+|.+..+ .+++.+.+.+++.++++++|+++||+|||+++..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 3456677788888888889999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
+.+++.+++++++|++.+++.|+++|++.+...+. ...+.|++|+++|+++++....+..+|..++|.+++++.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 99999999999999999999999999998887775 7888999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
.+||| ..+...++..++.. ....++||.+++.+ ++.+ ...+.
T Consensus 153 ---~~gwr---------~~f~~~~~~~~~~~~~~~~~lp~~~~~~~---~~~~----------------------~~~~~ 195 (382)
T PRK10091 153 ---EFSWR---------YTFLLIAVFNIAVLASIYFWVPDIRDEAK---GGLR----------------------EQFHF 195 (382)
T ss_pred ---hccHH---------HHHHHHHHHHHHHHHHHHHhCCCCCcccc---cCHH----------------------HHHHH
Confidence 44444 44455555444433 33455777532111 0000 00123
Q ss_pred cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
+|++..+.......+..........+.+.++. +..|+++.+.+...+..+++.+++++ ..+++.||+++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMM-----FISGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAA 269 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHH
Confidence 56666655444433333222233333333332 33588999999999999999999998 5556677788888877
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 437 (473)
.+..+..+....+..... ..+.... ..++.+.+.....+ .......+..|++.++.+. .+...++|.++||.
T Consensus 270 ~~~~~~~i~~~~~~~~~~----~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 270 VTDFIIVLALLMLFFFGG----MKTASLI-FAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAY 342 (382)
T ss_pred HHHHHHHHHHHHHHHHHh----hHHHHHH-HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHH
Confidence 777666555544332211 1121111 22222222222222 2333444545556666553 46778999999999
Q ss_pred hhhHHHHHhhhcc
Q 011997 438 GGGALFSWAQKRL 450 (473)
Q Consensus 438 ~~g~l~~~~g~~~ 450 (473)
+.|.+.|..+++.
T Consensus 343 ~~G~l~~~~~~~~ 355 (382)
T PRK10091 343 CGGMMLTLGLAYN 355 (382)
T ss_pred HhHHHHHcccCcc
Confidence 9999999765543
No 27
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=255.68 Aligned_cols=365 Identities=16% Similarity=0.108 Sum_probs=235.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHH-HHH-----HHHHHHHHhhhhhhhhcccCCch
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV-GSS-----FMFGRALTSVFWGLVADRYGRKP 113 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~-----~~~~~~~~~~~~G~l~dr~Grr~ 113 (473)
++.....+++.+++++|...+.+..|.+.+|++.++.+ .+.. .+. ..+...+++++.|+++||+||||
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 34566788899999999999999999999999988776 4433 222 23333578999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhccccHH--------HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHH
Q 011997 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI 184 (473)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (473)
+++.+..++.+++++++++++++ .++++|+++|++.+...+. ..+++|++|+++|++.+++.+...++|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 4689999999998887774 89999999999999999999999889988
Q ss_pred HHHHHHHHhccccccC-CCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHH
Q 011997 185 IGPALGGFLAQPAEKY-PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (473)
Q Consensus 185 ~~~~i~~~l~~~~~~~-~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (473)
+++.+++.+.....+. .. .++||.++.+..+...+........||+++..+++
T Consensus 168 ~g~~~g~~l~~~~~~~~~~---------~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~----------------- 221 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMA---------EWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK----------------- 221 (434)
T ss_pred HHHHHHHHHHHhCCHHHHh---------ccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh-----------------
Confidence 8888888775311100 01 33455555554332222222112222221100000
Q ss_pred hhhhhcccCCccccccccchhHHH-HHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHh
Q 011997 264 VKEEEGREATPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (473)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~ 342 (473)
++.+.....++..++++.+.. ....++..........+.|.|+.. ..|++..+.+.......++.+++.+
T Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~- 292 (434)
T PRK15075 222 ---HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT-----VLHLSAADSLLVTLCVGVSNFIWLP- 292 (434)
T ss_pred ---hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 000001112222333333322 222222223333444556665543 2588888888888888888888888
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHh-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHH
Q 011997 343 LYPFLERILGPIMVARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAAN 421 (473)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 421 (473)
..+++.||++||+....+.....+... .+..... ...... ......+.+.+.....+....+..|.+|++.|+++.
T Consensus 293 ~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~ 369 (434)
T PRK15075 293 IGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA--APSFAR-MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGF 369 (434)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc--CCchHH-HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhe
Confidence 566777778988877665444322211 1111111 111111 111122222333344455667788999999999999
Q ss_pred HHHHHHHH-HHHHhhhhhhhHHHHHhhh
Q 011997 422 GIAMTGMS-LFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 422 g~~~~~~~-~g~~~~~~~~g~l~~~~g~ 448 (473)
|+.+.... +++.++|.+.|++.|+.|.
T Consensus 370 g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 370 SLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred eHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 99755554 4688999999999999874
No 28
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=5.2e-31 Score=251.75 Aligned_cols=346 Identities=19% Similarity=0.125 Sum_probs=240.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
++++..+.+..++..++..+..+.+|. +.+++|.++.+ .|++.+++.+++.+++++.|+++||+||||+++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG 87 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH
Confidence 466777888899999999999999997 56889999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc--------ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHH
Q 011997 119 TASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (473)
Q Consensus 119 ~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 189 (473)
.++.+++.+.+.++ .+++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+....+|.+++|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 167 (399)
T PRK05122 88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPL 167 (399)
T ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHH
Confidence 99888877665543 25678999999999998888775 8889999999999999999999999999999999
Q ss_pred HHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhc
Q 011997 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (473)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (473)
++.+.+ .+| |+..+.+..+..++..+.....|++++. +++ ++
T Consensus 168 ~~~l~~-------~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------ 209 (399)
T PRK05122 168 GVLLYH-------WGG---------LAGLGLLIMLLALLGLLLARPRPAVPPV---KGE-RL------------------ 209 (399)
T ss_pred HHHHHH-------ccc---------HHHHHHHHHHHHHHHHHHHhcCCCCCCC---Ccc-ch------------------
Confidence 999987 344 4444454444433333222222222111 100 00
Q ss_pred ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 011997 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (473)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 349 (473)
+.++.+| +.+.......+..........+.+.|... .|+ .+.+......+++.++++++ .+++.|
T Consensus 210 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~-~g~l~~ 274 (399)
T PRK05122 210 ----PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGARLL-FGNLIN 274 (399)
T ss_pred ----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHHHH-HHHHHH
Confidence 0111111 11111112222222223333455555432 233 23455666777888888774 455566
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHH
Q 011997 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (473)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (473)
|.++++....+..+..+....+.... ..+ ...+..++.+++.....+.......+..|+++||++.|+.+....
T Consensus 275 r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (399)
T PRK05122 275 RLGGLRVAIVSLLVEILGLLLLWLAP-----SPW-MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLD 348 (399)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHhc-----cHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 67888887777666666555443321 122 223334444555555666666677788999999999999999999
Q ss_pred HHHHhhhhhhhHHHHHhhhcc
Q 011997 430 LFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 430 ~g~~~~~~~~g~l~~~~g~~~ 450 (473)
+|..++|.+.|.+.++.|...
T Consensus 349 ~g~~~~~~~~g~l~~~~g~~~ 369 (399)
T PRK05122 349 LSLGITGPLAGLVASWFGYPS 369 (399)
T ss_pred HHHHHHHHHHHHHHHHcCHHH
Confidence 999999999999999877543
No 29
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=6.9e-31 Score=250.04 Aligned_cols=352 Identities=16% Similarity=0.143 Sum_probs=256.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+....+....++...+.....+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 4444555556667778888999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
+..++.+.+.++++++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999998887775 8999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
.++|+..+...++..++.. ...+..||+++++++++ .+. .....++.
T Consensus 155 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~ 202 (385)
T TIGR00710 155 ------------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ--IST------------------YFETFLLL 202 (385)
T ss_pred ------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC--HHH------------------HHHHHHHH
Confidence 3344544455555444443 33445666543322110 000 01123456
Q ss_pred cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
+|+|+++...+...+..........+.|.++. +.+|+++.+.+.......++.+++++ ..+++.||.++++...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYI-----DIMGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHH
Confidence 77888877666655544444444444454432 23588999999999999999999988 4556666778888877
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.+.....+...++........ ..+........+.+.+.....+.......|..| ++++++.++.+.....++.+.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 277 MGLILFAVSAVLLEITAILGL-GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 776666655554443321111 122223333334445555566666677777666 689999999998888766666666
Q ss_pred hhHH
Q 011997 439 GGAL 442 (473)
Q Consensus 439 ~g~l 442 (473)
.+.+
T Consensus 355 ~~~~ 358 (385)
T TIGR00710 355 VSLI 358 (385)
T ss_pred HHhc
Confidence 6643
No 30
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=8.3e-32 Score=258.47 Aligned_cols=353 Identities=14% Similarity=0.073 Sum_probs=255.6
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+....++..++.....+.+|.+.++++.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 445556677778888889999999999988888 99999999999999999999999999999999998887777
Q ss_pred HHHHhh-----ccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 125 FNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 125 ~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
+.+..+ ..++++.+++.|+++|++.+...+. .+++.|++|+++|+++.++.+...++|..+||.+++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~--- 171 (417)
T PRK10489 95 GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA--- 171 (417)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH---
Confidence 665543 2568899999999999998877675 8899999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
..||+ ..+...++..++..+..+.+||++++++++++..+ + .....+..
T Consensus 172 ----~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~--------------~~~~~~~~ 220 (417)
T PRK10489 172 ----AGGVA---------WNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLR----S--------------LLAGFRFL 220 (417)
T ss_pred ----HHhhH---------HHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchH----H--------------HHHHHHHH
Confidence 34444 33455555555555556667775433211111000 0 00123345
Q ss_pred cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
+++|.++...+..++... ......++|.|... .+|.++.+.|.+.+..+++.+++.. ..+++.|+.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~-----~~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-ASAVRVLYPALADE-----VWQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLML 293 (417)
T ss_pred HcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHh-----ccCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHH
Confidence 677776655544433322 23344555655443 2588899999999999999999988 5566777656666666
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.+..+..+....+... ..+....+..++.+.+.....+...++..+..|++.||+++|+.+...++|..+||.+
T Consensus 294 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 294 LSTLGSFLAVGLFGLM------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred HHHHHHHHHHHHHHcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHH
Confidence 6665555554443321 1122233333344444444456667888899999999999999999999999999999
Q ss_pred hhHHHHHhhhcc
Q 011997 439 GGALFSWAQKRL 450 (473)
Q Consensus 439 ~g~l~~~~g~~~ 450 (473)
.|.+.+..|...
T Consensus 368 ~G~l~~~~g~~~ 379 (417)
T PRK10489 368 LGGLGAMMTPVA 379 (417)
T ss_pred HHHHHHHhchhh
Confidence 999999887644
No 31
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=4.1e-31 Score=253.23 Aligned_cols=368 Identities=14% Similarity=0.109 Sum_probs=266.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
...+..+.+..++..+......+..|.+++++|.++.+ .|+..+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 44556677777888888899999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh---hccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 120 ~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++.++.+++ ..+++++.++++|+++|+|.|...+. +.++.|+.|+++|.+.++..+....+|..++|.+++.+..
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999875 46899999999999999998888775 8888998877777778999999999999999999887652
Q ss_pred cccc---------C--CCcccccccccCCcchhHHHHHH-HHHHHHHHH-HhhcccCcCCCCCCCcchhhhHHHhhHhHH
Q 011997 196 PAEK---------Y--PNLFSSESLFGKFPYFLPCLCIS-LFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASA 262 (473)
Q Consensus 196 ~~~~---------~--~~~~gw~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (473)
...+ . ....+||+.+ ..+||.++.... +..++.++. ....||.+++++. ++ +
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~--~----------- 243 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-DA--K----------- 243 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-cc--c-----------
Confidence 1100 0 0012566655 456787775433 222222222 2334442211100 00 0
Q ss_pred HhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHh
Q 011997 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (473)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~ 342 (473)
+.+.....++++|+|.++...+..++..........+.+.|+. .+.+|+++.+++..+....++.++++.
T Consensus 244 -----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~----~~~~g~s~~~ag~~~~~~~~~~~vG~~- 313 (438)
T PRK10133 244 -----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV----EEIPGMTAGFAANYLTGTMVCFFIGRF- 313 (438)
T ss_pred -----ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 0001123456788888877666666665555555556665532 234699999999999999999999998
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHH
Q 011997 343 LYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (473)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (473)
..+++.||+++++.+..+..+..+.+.+..+.. + .+ ......+.+++....+|..++...+..|+ +.+++.+
T Consensus 314 ~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~---~--~~--~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~ 385 (438)
T PRK10133 314 TGTWLISRFAPHKVLAAYALIAMALCLISAFAG---G--HV--GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSS 385 (438)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC---C--hH--HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchh
Confidence 566676778988888877666655544433211 1 11 12333445667788899999988887764 5778888
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhh
Q 011997 423 IAMTGMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 423 ~~~~~~~~g~~~~~~~~g~l~~~~g 447 (473)
+.. ....|+.++|.+.|.+.|..|
T Consensus 386 l~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 386 FIV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred HHh-HHhccchHHHHHHHHHHHhcc
Confidence 876 455789999999999999876
No 32
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=8e-31 Score=248.44 Aligned_cols=345 Identities=14% Similarity=0.128 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+.++.++...++...+.....+.+|.+.+++|.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~ 79 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4567788888899999999999999999999999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
+.+++.+.+++++|++.++++|+++|++.+...+. .+.+.|..++++|+++++..+...++|..+||.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 155 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST---- 155 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----
Confidence 99999999999999999999999999998887775 7777888999999999999999999999999999999876
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (473)
...| ...|+. .........+.....+|+ ..++ + +..+.++.+
T Consensus 156 ---~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~-~-----------------------~~~~~~~~~ 197 (381)
T PRK03633 156 ---ELMS-----VLPWVT----GLVLAAILPLLFTRILNQ--QAEN-H-----------------------DSTSIWPML 197 (381)
T ss_pred ---cccc-----hHHHHH----HHHHHHHHHHHHhcccCC--CCCC-C-----------------------CCCCHHHHH
Confidence 1111 112221 111111111111122221 1100 0 011234456
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHH
Q 011997 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (473)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (473)
|+|.++......+...........+.|.|... .|.++.+.+...+...++.++++.. .+++.||+++++.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~~-~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQWP-IGRLADRFGRLLVLRV 270 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHhh-hHHHHHHcCcHHHHHH
Confidence 77776654433333333333444556665532 3788889999999988999999984 5566667788888777
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
+.....++..... . .... .....+.+.......|.......|..|+++++.+.+..+...++|..+||.+.
T Consensus 271 ~~~~~~~~~~~~~--~---~~~~----~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 271 QVFVVILGSIAML--S---QAAM----APALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred HHHHHHHHHHHHh--h---hHHH----HHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666555443322 1 1111 11222233344456788888888889988888888998889999999999999
Q ss_pred hHHHHHhhhc
Q 011997 440 GALFSWAQKR 449 (473)
Q Consensus 440 g~l~~~~g~~ 449 (473)
|++.|+.+..
T Consensus 342 G~l~~~~g~~ 351 (381)
T PRK03633 342 AMLMQNYSDN 351 (381)
T ss_pred HHHHHHhCcc
Confidence 9999987743
No 33
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=9.9e-31 Score=248.80 Aligned_cols=355 Identities=12% Similarity=0.105 Sum_probs=256.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
++..+..++..++.........+.+|.+.+++|.+.++ .+++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455667778888888888999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.+.+++.++++++++++.+++.|+++|++.+...+. .+++.|++|+++|++.++..+....+|..++|.+.+.+.+.
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 157 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999998877664 88999999999999999999888999999999998887641
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
..||| .++...++..++..+..++ ++.|+.++++++ + . + + ..++
T Consensus 158 ----~~gw~---------~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~--~-~--------------~-~---~~~~- 201 (394)
T PRK03699 158 ----SIEWY---------WVYACIGLVYVAIFILTLF-SEFPALGKHAPK--A-D--------------K-P---VAKE- 201 (394)
T ss_pred ----cccHH---------HHHHHHHHHHHHHHHHHHh-cCCccccccCcc--c-c--------------C-c---cccc-
Confidence 23444 4445555544444333332 222211111000 0 0 0 0 0011
Q ss_pred cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
..++.++...+..++..........+.|.|+.. .+|+++.+.+...+...++..++++ ..+++.||+++++.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQK-----KFGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRILT 275 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHHH
Confidence 123555555555565555556666777777543 3588999999999998999999988 5666677788888777
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
....+..+...++... . ..+ ...+..+..++......+...+...+..| +.+++..|......++|..++|.+
T Consensus 276 ~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~ 348 (394)
T PRK03699 276 VLAGLALVLMYLFVNT---D--DPS-HLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVV 348 (394)
T ss_pred HHHHHHHHHHHHHHHc---C--Cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHH
Confidence 6665554443333221 1 111 12223334444455566666666666565 456778889999999999999999
Q ss_pred hhHHHHHhhhccc
Q 011997 439 GGALFSWAQKRLD 451 (473)
Q Consensus 439 ~g~l~~~~g~~~~ 451 (473)
.|++.|..|....
T Consensus 349 ~G~l~~~~g~~~~ 361 (394)
T PRK03699 349 TSPIVAHFGLQAA 361 (394)
T ss_pred HHHHHHHhCchhh
Confidence 9999998876543
No 34
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=7.5e-31 Score=249.94 Aligned_cols=344 Identities=16% Similarity=0.134 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+.++.+.+..++..+..+...|.+|. +.+|+|.|..+ .|++.+++.+++.++++++|+++||+||||+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 44566677778888888888999996 46889999999 999999999999999999999999999999999998
Q ss_pred HHHHHHHHHh---hc-----cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 120 ASVVIFNTLF---GL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 120 ~~~~~~~~~~---~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
+...++.+.. +. .++++.++++|+++|++.+...+. .+++.|++|+|+|++++++.+.+...|..++|.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 8777665432 22 357899999999999998887775 88899999999999999999999999999999999
Q ss_pred HHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcc
Q 011997 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (473)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (473)
+.+.+ .++|+..+.+..+..++........||.++++ +++ +.
T Consensus 169 ~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------ 210 (392)
T PRK12382 169 LLLHS----------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAHA---GER-PS------------------ 210 (392)
T ss_pred HHHHh----------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCCc---ccC-ch------------------
Confidence 99987 33444443443333332222222233322111 000 00
Q ss_pred cCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
.++..| .++...+...+..........+.+.|+.. .+++ +.+......+++.++++++ .+++.||
T Consensus 211 ----~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~-~g~l~~r 275 (392)
T PRK12382 211 ----LWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWA--MAGFTLTAFGGAFVLMRVL-FGWMPDR 275 (392)
T ss_pred ----HHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCc--hhHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 001111 11111111112222222333444555432 2433 3455566667777788774 4555666
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH
Q 011997 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (473)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (473)
.++++.+..+..+..+...++... + ..+ .......+.+.+.....+.......+..|+++||++.|+.+....+
T Consensus 276 ~g~~~~~~~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (392)
T PRK12382 276 FGGVKVAIVSLLVETVGLLLLWLA---P--TAW-VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI 349 (392)
T ss_pred cCCCeehHHHHHHHHHHHHHHHHc---c--cHH-HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 788888777776666665544332 1 122 2223334444444555667777778889999999999999999999
Q ss_pred HHHhhhhhhhHHHHHhhhc
Q 011997 431 FKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~~ 449 (473)
|..++|.+.|.+.|+.|..
T Consensus 350 g~~ig~~~~g~l~~~~g~~ 368 (392)
T PRK12382 350 AYGVSGPLAGMLATSFGYP 368 (392)
T ss_pred HHHHHHHHHHHHHHHhCch
Confidence 9999999999999987754
No 35
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2.8e-31 Score=249.55 Aligned_cols=347 Identities=25% Similarity=0.369 Sum_probs=252.8
Q ss_pred HHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
+++..++..++.....+..| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||++++.+.++.++
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~ 74 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhh
Confidence 35677788888889999999 889999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCc
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 203 (473)
+.++..++++.+.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+....+|..++|.+++.+.+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~ 147 (352)
T PF07690_consen 75 GSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------Y 147 (352)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------H
T ss_pred HHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------c
Confidence 9766667788889999999999998888886 9999999999999999999999999999999999999997 4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCC-cccccccc
Q 011997 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKN 281 (473)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 281 (473)
++||+.+ .+.++..++..+ ...++++++++++.++++++.. +++++.. .++.++++
T Consensus 148 ~~~~~~~---------~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 205 (352)
T PF07690_consen 148 FGWRWAF---------LISAILSLIAAILFILFLPEPPPPRERESPKESES-------------KKPKPLKPGFKSLFKN 205 (352)
T ss_dssp CHHCCHH---------HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHH
T ss_pred ccccccc---------ccccchhhhhhhhHhhhhhhccccccccccccccc-------------cccccccccccccccc
Confidence 5555444 566665555543 3345555544433332221100 0111111 35666777
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCC-hhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (473)
|.++......++..........+.|.|.. +.+|++ ..+.+......++..++++.+.++ +.||.++++.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~ 279 (352)
T PF07690_consen 206 PVLWILLIAFFLFFFVFSGFSFFLPLYLQ-----EVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR-LSDRFGRRRRLLIA 279 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCHHHHHHH
T ss_pred chhhhhhhhhhHHHHHHHHhhcccchhhh-----hccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCcHHHHHHH
Confidence 76764444555544455556666776533 335778 789999999999999999885554 45666766655555
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 436 (473)
.....+....+...... ..........++.+.+.....+....+..+.+|++++|++.|+.+...++++.++|
T Consensus 280 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 280 ILLLILGALGLLLLPFS---SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHCCSHHH---CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55544444443332221 11122233444455566667888999999999999999999999999999999987
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=9.1e-31 Score=245.57 Aligned_cols=370 Identities=12% Similarity=0.033 Sum_probs=253.6
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
.+|.+...++..++.+....+.++..+.+.+ |+|++.+| .+++.+++.+++.++.++.|++.||+|.|+++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3567777888888888999999999998876 89999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc-----ccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 118 GTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 192 (473)
+.++.++.++..+++ ++++.+++.|++.|++.+...+....+++++|+++||+++|+.....++|..+++++...
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999999999999886 899999999999999855444468999999999999999999977777777666665554
Q ss_pred hccccccCCCccccccccc----CCcchhHHHHHHHHHHHHHHHH-hhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhh
Q 011997 193 LAQPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (473)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (473)
+.... .-..+||+.... ..+|+....+.....++..+.. +..++.++. +.+
T Consensus 186 ~i~~~--l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~----~~~------------------ 241 (462)
T PRK15034 186 VIFVP--VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS----RAS------------------ 241 (462)
T ss_pred HHHHH--HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----ccC------------------
Confidence 33100 000345544331 2235555555444444443333 333432211 000
Q ss_pred hcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
.....+.+|+|+.|...+.+++.+..+.++..++|.|.... ++............+...+.++ .++++
T Consensus 242 ----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-------~~~~~~l~~~~l~~l~~~l~rp-lgG~L 309 (462)
T PRK15034 242 ----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-------FPDVNILRLAFFGPFIGAIARS-VGGAI 309 (462)
T ss_pred ----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cChHHHHHHHHHHHHHHHHHHH-hhHHH
Confidence 11245578999999999999998888888888888886542 2222222223333556666666 67888
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc-------------
Q 011997 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ------------- 414 (473)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 414 (473)
.||+|+++++..+.+...+........................+......+......+-++.+.+|+
T Consensus 310 ADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~ 389 (462)
T PRK15034 310 SDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSD 389 (462)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccch
Confidence 8899999998888876666553332222111101111122222211122222222333344444442
Q ss_pred --------chhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc
Q 011997 415 --------DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 415 --------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 450 (473)
++.|.+.|+....+.+|+++-|.+.|...+..|+..
T Consensus 390 ~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~ 433 (462)
T PRK15034 390 EQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPV 433 (462)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcH
Confidence 268899999999999999999999999999988754
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=9.4e-31 Score=256.25 Aligned_cols=385 Identities=15% Similarity=0.058 Sum_probs=247.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHh--------cccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCC
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr 111 (473)
.+..+...++.+..+++...+.+..|.+.+++ +.++.+ .+++.+++.++..++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Gr 84 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGR 84 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34455666778888899999999999998887 666666 9999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHhhcc------------ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHH
Q 011997 112 KPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (473)
Q Consensus 112 r~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (473)
|++++.+.+++.++.+.++++ ++++.++++|+++|++.|...+. .++++|++|+++|++++++.+.+
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 999999999999888877753 22567889999999998888775 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhh--HHH
Q 011997 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDA 256 (473)
Q Consensus 179 ~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~ 256 (473)
..+|..+++.+++.+....... .. ..++||.++...++..++..+..+++||+|++...++++++.. .++
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~~-------~~-~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~ 236 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDAS-------WL-NTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRK 236 (479)
T ss_pred HHHHHHHHHHHHHHHhccCccc-------cc-ccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHH
Confidence 9999999998887765311100 00 1345666667776666666666778899876432222111110 000
Q ss_pred hhH------hHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHH
Q 011997 257 LES------ASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA 330 (473)
Q Consensus 257 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 330 (473)
... ..++..+..+++....+..+... ............+...........|. +...+..|.+....+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--p~i~~~~g~~~~~~~~~~~ 313 (479)
T PRK10077 237 IMGNTLATQALQEIKHSLDHGRKTGGKLLMFG-VGVIVIGVMLSVFQQFVGINVVLYYA--PEIFKTLGASTDIALLQTI 313 (479)
T ss_pred HcCChhHHHHHHHHHHHHHHhhhhhhhhcchh-HHHHHHHHHHHHHHHHhChhHHHHHH--HHHHHHcCCCCchHHHHHH
Confidence 000 00000000000000001111100 01111111111111111000011111 1122335777776777777
Q ss_pred HHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011997 331 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 410 (473)
Q Consensus 331 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..++..+++.+ ..+++.||++||+.+..+..+..++..++.......... ........+..........+..+.+.+|
T Consensus 314 ~~~~~~~i~~~-~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e 391 (479)
T PRK10077 314 IVGVINLTFTV-LAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPG-IVALLSMLFYVAAFAMSWGPVCWVLLSE 391 (479)
T ss_pred HHHHHHHHHHH-HHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCccc-HHHHHHHHHHHHHHhccccchhHHHhHh
Confidence 77888888887 566677778999999888888777766654432211111 1111112121112222334677889999
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 411 AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 411 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
.+|+++|+++.|+.+..++++..+++.+.+.+.
T Consensus 392 ~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 392 IFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999988777655
No 38
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.4e-31 Score=262.32 Aligned_cols=391 Identities=14% Similarity=0.086 Sum_probs=250.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHh-----cccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchh
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF-----QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~ 114 (473)
++.+....++.+.++++....+...|.+.+++ +.+..+ .+++.+.+.++..++++++|+++||+|||++
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~ 88 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKRV 88 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 34445677788889999999999988877653 122333 7899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcccc------HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHH
Q 011997 115 IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 187 (473)
+.++.+++.++.++++++++ ++.++++|+++|++.|...+. ..+++|++|+++|++++++.+....+|..+++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888765 789999999999998887774 99999999999999999999999999999999
Q ss_pred HHHHHhcccccc-CCCcc-----cccc--cccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchh-hh--HHH
Q 011997 188 ALGGFLAQPAEK-YPNLF-----SSES--LFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD-VS--YDA 256 (473)
Q Consensus 188 ~i~~~l~~~~~~-~~~~~-----gw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~--~~~ 256 (473)
.++..+...... +.... .++. .. .++||.++.+.++++++.++..+++||+|++...++++++ .. ..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAV-DYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchh-cccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 998876531110 00000 0110 11 3568888888888888877888899999987433222211 11 111
Q ss_pred hhHh-----HHHhh---hhhcccCCccccccccc---hh-HHHHHHHHHHH---hhhhhhhHHHHHhhcCccccCCCCCC
Q 011997 257 LESA-----SAEVK---EEEGREATPKKSLLKNW---PL-MSSIIVYCVFS---LHDMAYSEIFSLWANSPKKLGGLNYS 321 (473)
Q Consensus 257 ~~~~-----~~~~~---~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (473)
..+. .++.+ ++++....+++++++++ +. +........+. ....+...+.|.++ ++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~------~~~G~~ 321 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL------SAIGYS 321 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHH------HHHcCC
Confidence 1100 00000 00011112455565432 22 11121111111 11122222233332 223444
Q ss_pred hhhHH-----------H-HHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHH
Q 011997 322 TQMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCA 389 (473)
Q Consensus 322 ~~~~g-----------~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (473)
..+.+ . ......++.+++.+ ...++.||+|||+.+..+..+..++..++............ ....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 398 (502)
T TIGR00887 322 PPAATNNAYEELYKTAVGNLIIALAGTVPGYW-VTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGF--LAIY 398 (502)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHH--HHHH
Confidence 32211 1 12223344555555 56677778899998887776666655544432211111111 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 390 SVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
.+...+...+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+.+.+..
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 399 VLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred HHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 111112233345567778899999999999999999999999999999999999854
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=6.5e-31 Score=253.78 Aligned_cols=385 Identities=14% Similarity=0.053 Sum_probs=254.3
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
++|..+....+................|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~ 89 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIA 89 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHh
Confidence 3444444444444444445556777889999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHH-HHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.++..++.++++++++++.+++ .|+++|++.+...+ ..+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 90 GGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999999998875 57999999886544 5778889886 789999999999999999999999999988
Q ss_pred ccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhc-ccCcCCCCCCCcchhh-hHHHhhHhHHHhhhhhcccCC
Q 011997 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDV-SYDALESASAEVKEEEGREAT 273 (473)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 273 (473)
.+|||+ .+.+.+++.++..+..+++ ++.+.++..+.++++. ..+...+........++..+.
T Consensus 169 -------~~gwr~---------~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (455)
T TIGR00892 169 -------SFGWRG---------SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRF 232 (455)
T ss_pred -------HhChHH---------HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhh
Confidence 445544 4455555554443333333 3221111000000000 000000000000000000111
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh-hh
Q 011997 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LG 352 (473)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~-~~ 352 (473)
...+++++|+++......++..........+++.|.. +.|++..+++...+..+++.++++++.+.+.+++ .+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~ 306 (455)
T TIGR00892 233 LDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAK------DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR 306 (455)
T ss_pred cchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 1235778888887777666655555555556666543 2488999999999999999999888555444432 33
Q ss_pred hhHHHHHHH--HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH
Q 011997 353 PIMVARIAG--VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (473)
Q Consensus 353 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (473)
+++...... ....+...+... .. ..+ .+.+..++.++......+...+...+.+|+++++++.|+.+...++
T Consensus 307 ~~~~~~~~~~~~~~~l~~ll~~~---~~--~~~-~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 380 (455)
T TIGR00892 307 PHVQYLFSFALLFNGLTHLLCAL---AG--DYT-GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC 380 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hc--hHH-HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH
Confidence 333333222 222222222111 11 222 2333444455555566777888888999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHhhhccccccccC
Q 011997 431 FKAAGPAGGGALFSWAQKRLDASFLPG 457 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~~~~~~~~~~ 457 (473)
|+.+||.++|.+.|..+.+...++..+
T Consensus 381 g~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 381 AVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred HHHccccceeeeehhcCCcchHHHHhh
Confidence 999999999999998765443333333
No 40
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.4e-30 Score=249.12 Aligned_cols=356 Identities=16% Similarity=0.131 Sum_probs=257.9
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+.+..++..++...+.|.+|.+.+++|.+..+ .++..+.+.+++.+++++.|+++||+||||+++.+..+..+
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455566677778888899999999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCc
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 203 (473)
+.+.+.++++++.+++.|+++|++.+...+. .+.+.|.+|+++|.+..++......+|..++|.+++.+.+ +
T Consensus 91 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~ 163 (406)
T PRK15402 91 TCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------V 163 (406)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------c
Confidence 9999999999999999999999998887775 8899999999999999999988888999999999999987 4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccc
Q 011997 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (473)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (473)
.+||+.| .+.++..++..+ ..+..||++++.+++.+ .+ + .....++++++|
T Consensus 164 ~~w~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~--------------~~~~~~~~~~~~ 215 (406)
T PRK15402 164 LPWRGMF---------VLFAALAALSFFGLWRAMPETAGRVGEKLS-LK----E--------------LGRDYKLVLKNR 215 (406)
T ss_pred cCccHHH---------HHHHHHHHHHHHHHHHhCCCCCcccccccc-HH----H--------------HHHHHHHHHcCc
Confidence 5555444 554444444333 33456765432211100 00 0 011235678888
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHH
Q 011997 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (473)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 362 (473)
+++...+...+.......+....|.++. +.+|+++.+.+.......++.+++.. ..+++.||.++++....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILI-----SGEQLSSYEYGLLQVPVFGALIAGNL-TLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 8887766665555444444445555533 23588899999888777778888877 45556667788888887777
Q ss_pred HHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
...++..++........ ..+........+.+.+.....+........ .+++++|++.++.+..+.++..+|+.+.+.+
T Consensus 290 ~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 290 PMVAGLLLAALATVISS-HAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHHHHccc-ccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666555544321111 112222333333333444444444444433 3458999999999999999999999999999
Q ss_pred HHHhhhc
Q 011997 443 FSWAQKR 449 (473)
Q Consensus 443 ~~~~g~~ 449 (473)
++..+..
T Consensus 368 ~~~~~~~ 374 (406)
T PRK15402 368 YLGGGNG 374 (406)
T ss_pred ccCCchH
Confidence 8876654
No 41
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=7.8e-31 Score=248.65 Aligned_cols=354 Identities=12% Similarity=0.048 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
....++++.++..++........+.+.+|++.+..+ .+++.+.+.+++.+.++++|+++||+||||+++++..+
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 355677788888887776777777778999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 011997 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (473)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 200 (473)
.+++++.++++++. ++.|+++|++.+...|+ .+++.|++|+++|++++++.+....+|..+||.+++++.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99988887776664 78899999999999886 9999999999999999999999999999999999999986
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccc
Q 011997 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (473)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (473)
. .|+.++.+.+...++..+..+.+||+++++++++++.+...++. . ...+.+++
T Consensus 150 -----------~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~-------~~~~~l~~ 203 (393)
T PRK11195 150 -----------P-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIALLRDF-------F-------HACRVLWR 203 (393)
T ss_pred -----------H-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHHHHHH-------H-------HHHHHHHh
Confidence 1 13344444444334444455677876543222111111000000 0 01245667
Q ss_pred cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHH
Q 011997 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (473)
+|.++.......+............+.|.+. .+|.++.+.|......+++.+++++.. +++.|+.++++....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~lg~s~~~~G~~~~~~~~g~i~g~~~~-~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPV-----ALGITLNQPAYLQAVVAIGIAVGAGAA-ARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCChhHHHHHHHHHHHHHHHHHHHH-HHHhcCCcccchHHHH
Confidence 7776655444333333333333444445432 258899999999999999999999855 4455555666666555
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcch-hhHHHHHHHHHHHHHHHhhhhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
... .+....+.. ....+ ......++.+.+.....+...+..++..|++. +|++.++.+..++++..++..+.
T Consensus 278 ~~~-~~~~~~~~~-----~~~~~-~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 278 ILM-GLVVLLMAL-----QHSLL-PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred HHH-HHHHHHHHH-----HhHHH-HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 432 222222221 11222 22333334444444555556666777666554 79999999999999999999999
Q ss_pred hHHHHHhhhc
Q 011997 440 GALFSWAQKR 449 (473)
Q Consensus 440 g~l~~~~g~~ 449 (473)
+.+ +..|-.
T Consensus 351 ~~~-~~~~~~ 359 (393)
T PRK11195 351 SLL-VKLGVP 359 (393)
T ss_pred HHH-HHcCCC
Confidence 855 555543
No 42
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=3.9e-30 Score=244.51 Aligned_cols=347 Identities=18% Similarity=0.215 Sum_probs=250.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
..+....++.........|.++. +.+++|.+..+ .|++.+...++..+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 34456666777777777888775 56889999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 201 (473)
.++.+.+.++++++.+++.|+++|++.+...|. .+++.|++|+++|++++++.+...++|..+||.+++++.+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~------ 160 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ------ 160 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 8999999999999999999999999999999999999873
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccc
Q 011997 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (473)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (473)
+||| ..+.+.++..++.. +..+..||.++.+ .+ ++ ....+++.++
T Consensus 161 --~g~~---------~~f~~~~~~~~~~~i~~~~~~~~~~~~~---~~--~~------------------~~~~~~~~~~ 206 (400)
T PRK11646 161 --YDFR---------LVCATGAVLFVLAAAFNAWLLPAYKLST---VR--TP------------------VREGMTRVLR 206 (400)
T ss_pred --hhHH---------HHHHHHHHHHHHHHHHHHHhCCcccccc---cc--hh------------------hHHHHHHHHc
Confidence 3444 44455544444332 3334455432110 00 00 0112445677
Q ss_pred cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHH
Q 011997 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (473)
+|+++...+..+...........+.|.|... .+.++.+.+...+..++....+.....++.+||.+.++....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 280 (400)
T PRK11646 207 DKRFVTYVLTLTGYYMLAVQVMLMLPIMVND------IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAG 280 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhhhHHh------hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 8877665554443332222233345554332 2346778888888877777766666788888877666655555
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 440 (473)
..+..+...++.... ..+. ..+...+.+.+.....|...+...+.+|+++||++.|+.+....+|..+||.+.|
T Consensus 281 ~~~~~~~~~~l~~~~-----~~~~-~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 281 LLIMSLSMFPIGMVS-----NLQQ-LFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred HHHHHHHHHHHHHhh-----hHHH-HHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchH
Confidence 555555544433321 1221 2222233334445566777888899999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 011997 441 ALFSWAQK 448 (473)
Q Consensus 441 ~l~~~~g~ 448 (473)
.+.|+.+.
T Consensus 355 ~l~~~~~~ 362 (400)
T PRK11646 355 WLFDLGKA 362 (400)
T ss_pred HHHHHHhh
Confidence 99999764
No 43
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-30 Score=239.39 Aligned_cols=363 Identities=19% Similarity=0.164 Sum_probs=269.9
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc---cccHHHHHHHHHHH
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFLL 145 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~ 145 (473)
+.+|.+.++++.+...+.+.+++.+|.++|+++.|+++||+|||..+..+.++..++.+++.+ .+++.+++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 556666666667777999999999999999999999999999999999999888888777665 57899999999999
Q ss_pred hhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHH
Q 011997 146 GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 224 (473)
Q Consensus 146 G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 224 (473)
|+..|..... ..++.|..|++.||..-.+.+.+..+|..++..++.-- .+|- ...|+..+....+
T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~---------ilGt-----~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPS---------LLGT-----EDLWPYLLAFPLI 192 (485)
T ss_pred HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHH---------hcCC-----CcchHHHHHHHHH
Confidence 9999988775 99999999999999999999999999999997665322 2221 3346677788888
Q ss_pred HHHHHHHHHhhcccCcCCCCC-CCcchhhhH--H----------HhhHhHHHhhhh--hcccCCccccccccchhHHHHH
Q 011997 225 FAFGVTIAAFWLPETLHRHND-DDDSCDVSY--D----------ALESASAEVKEE--EGREATPKKSLLKNWPLMSSII 289 (473)
Q Consensus 225 ~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~--~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 289 (473)
++++..+...++||+|++.-. +++++++.+ + +.++..++.+++ ++++..+.+++++++..+....
T Consensus 193 ~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~ 272 (485)
T KOG0569|consen 193 PALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLL 272 (485)
T ss_pred HHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHH
Confidence 888888999999999998554 333332221 1 111111111112 1225567889999988766533
Q ss_pred HHHH-HHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 290 VYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (473)
Q Consensus 290 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
..+. ....++.. ..+.+.++.....+.|++..++-+.....++..++.++ .+.++.||.|||+++..+..++.+..
T Consensus 273 i~~~v~~~qq~sG--i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 273 IGIVVSFAQQFSG--INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHHhcC--cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 3322 22333332 23333333445556799999999999999999999998 66777777899999999988887776
Q ss_pred hHHHHHHHhhhhh-HHH---HHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 369 TSYPYIAMLSGFG-LAF---LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 369 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
..+.......... .|. .+.........+..+..|..+.+.+|++|++.|..++++...++++..++-......+.+
T Consensus 350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~ 429 (485)
T KOG0569|consen 350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN 429 (485)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554443332222 222 233334444555667789999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 011997 445 WAQK 448 (473)
Q Consensus 445 ~~g~ 448 (473)
..|.
T Consensus 430 ~~g~ 433 (485)
T KOG0569|consen 430 VIGP 433 (485)
T ss_pred Hhcc
Confidence 9886
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.1e-30 Score=256.90 Aligned_cols=381 Identities=16% Similarity=0.161 Sum_probs=256.5
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
.+++.+..+++..+++.++.....+..|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3455666888888999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.++.+++.++++++++++.+++.|++.|++.+...+. ..++.|.+|+++|+++++.......+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP- 169 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999999999999988777664 8999999999999999999999999999999999999987
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchh--hhHHHhhHhHHHhhh--------
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASAEVKE-------- 266 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------- 266 (473)
.++||+.| .+..+..++.++....+||++++.++++++.+ +..+...........
T Consensus 170 ------~~~w~~~f---------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 170 ------VWGWRALF---------FIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred ------cCCHHHHH---------HHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 45555443 44443333333344456665432211111100 000000000000000
Q ss_pred -----hhcccC-Ccc-------------------ccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCC
Q 011997 267 -----EEGREA-TPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (473)
Q Consensus 267 -----~~~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (473)
...... ..+ ....+.+.........+...........++|.|+. +.+|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~-----~~~g~~ 309 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLK-----TDLGYD 309 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHH-----hhcCCC
Confidence 000000 000 00000010111111111111111123345565543 235899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSII 401 (473)
Q Consensus 322 ~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (473)
..+.+...+...++.+++.. ..+++.||+++++.+..+..+..+....+.... ....+ ......+..+....+..
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~ 384 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCC-VGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG---GANVW-VLGLLLFFQQMLGQGIS 384 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc---ccHHH-HHHHHHHHHHHHhcccc
Confidence 99999999999999999988 566677778888887766655444433222211 11111 12222222222333344
Q ss_pred HHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc
Q 011997 402 TGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 450 (473)
+....+.++.+|+++||+++|+.+....+|+.++|.+.|.+.|..|...
T Consensus 385 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~ 433 (496)
T PRK03893 385 GLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGT 433 (496)
T ss_pred hhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHH
Confidence 5566778888999999999999999999999999999999999877543
No 45
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.7e-31 Score=260.61 Aligned_cols=339 Identities=17% Similarity=0.189 Sum_probs=240.7
Q ss_pred hhHHHHHHHhccc---ccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHH
Q 011997 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (473)
Q Consensus 62 ~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (473)
+..|.+.+|++++ ..+ .++..+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5667888999998 666 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchh
Q 011997 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (473)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (473)
++.|++.|++.+...+. .+++.|++|+++|+++.++...+..+|.+++|.++..+.+ ||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 99999999998887775 9999999999999999999999999999999998866542 455
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhH-------------H--HhhhhhcccCCccccccccc
Q 011997 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESAS-------------A--EVKEEEGREATPKKSLLKNW 282 (473)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~ 282 (473)
.+.+.+++.++..+..+++||+|++...+++.++.. +..++.. . ++++++++.+...++++|+|
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 323 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEAL-KILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTP 323 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHH-HHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCCh
Confidence 556666666666666688999987643333222211 1111000 0 00001111224567788888
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHH
Q 011997 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (473)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 362 (473)
.++...+...+..+.........+.+ ....+.+.. ......++..+++.+ ...++.||+|||+.+..+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~i~~~~-~~~~l~dr~grr~~~~~~~~ 393 (505)
T TIGR00898 324 NLRKTTLCLMMLWFTTAFSYYGLVLD------LGNLGGNIY---LDLFISGLVELPAKL-ITLLLIDRLGRRYTMAASLL 393 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc------ccccCCChH---HHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHH
Confidence 88776655444332221111111111 122344433 333344566677766 55667777899999888877
Q ss_pred HHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhh
Q 011997 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 440 (473)
+..++.+++.+... ...+ ......++..++.....+..+.+..|.+|++.|+++.|+.++...+|+.++|.+.+
T Consensus 394 ~~~~~~l~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 394 LAGVALLLLLFVPV---DLYF-LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHcCC---CchH-HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 77776665544321 1112 22233333344455666778889999999999999999999999999999999998
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.1e-30 Score=246.72 Aligned_cols=368 Identities=19% Similarity=0.230 Sum_probs=251.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
++.+....+..+....+.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 34444555666677777788888899999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.+..++.++..++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 166 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP--- 166 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCCcchhHHHHHH-HHHHHHHHHHhhcccCcCCCCCCCcchh-hhHHHhhHhHHHhh----hhhcc--
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCIS-LFAFGVTIAAFWLPETLHRHNDDDDSCD-VSYDALESASAEVK----EEEGR-- 270 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~-- 270 (473)
..||+..+ .+.+ +..+...+...++||+++...++++++. ...++.+....+++ ++++.
T Consensus 167 ----~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T TIGR00895 167 ----VFGWRSLF---------YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQ 233 (398)
T ss_pred ----cccceeeh---------hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccccccc
Confidence 56666555 4443 3333334455667877653222211110 00011110000000 00000
Q ss_pred -cCCc-cccccccch---hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHH
Q 011997 271 -EATP-KKSLLKNWP---LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (473)
Q Consensus 271 -~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~ 345 (473)
.... .+.+++++. .+...+..++..........+.|.+ .++.|+++.+.+.......++.+++.+ ..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 306 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKL------MVELGFSLSLAATGGALFNFGGVIGSI-IFG 306 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 0011 111222222 2222223333333333333344422 233588899999999999999999988 555
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHH
Q 011997 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 425 (473)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 425 (473)
++.||.++++..... .+..+...++... .. ..+ ......++.+.+.....+...++..+.+|++.|+++.|+.+
T Consensus 307 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~--~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 380 (398)
T TIGR00895 307 WLADRLGPRVTALLL-LLGAVFAVLVGST--LF--SPT-LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380 (398)
T ss_pred HHHhhcchHHHHHHH-HHHHHHHHHHHHH--hh--CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 666777877443333 3222222222211 11 111 23334445556666777888999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHH
Q 011997 426 TGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 426 ~~~~~g~~~~~~~~g~l 442 (473)
....+|..++|.+.|.+
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999999875
No 47
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.3e-30 Score=252.29 Aligned_cols=367 Identities=11% Similarity=0.005 Sum_probs=237.6
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 011997 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (473)
+.......+........|.+.++ |.+..+ .+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+
T Consensus 36 ~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~ 108 (452)
T PRK11273 36 FGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML 108 (452)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHH
Confidence 34444445555566778888887 999998 99999999999999999999999999999999999999999998
Q ss_pred Hhhcc----ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHH-HHHHHHHHhccccccCC
Q 011997 128 LFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKYP 201 (473)
Q Consensus 128 ~~~~~----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~~~~~~ 201 (473)
+++++ .+++.+++.|++.|++.+...+ ....+.|++|+++|++++++.+.+.++|.. .+|+++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~------ 182 (452)
T PRK11273 109 FMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW------ 182 (452)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH------
Confidence 88775 3788899999999998887766 477889999999999999999999998864 45554433332
Q ss_pred CcccccccccCCcchhHHHHHHHHHHH-HHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCc-ccccc
Q 011997 202 NLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLL 279 (473)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 279 (473)
..|| |..+.+.++..++ .++..+++||+++....+++++.+ ++..+..++.++++.+.... .+.++
T Consensus 183 -~~gw---------~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T PRK11273 183 -FNDW---------HAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDYPDDYNEKHEQELTAKQIFMQYVL 250 (452)
T ss_pred -hccH---------HHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hccccccccccCCCccHHHHHHHHHH
Confidence 1244 4444555544444 345556678876542211111000 00000000000000000001 12367
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh--hhhHHH
Q 011997 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVA 357 (473)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~ 357 (473)
|++.++...+..++..........++|.|+... .|++..+++.......++.+++.+ ..+++.||. +|+...
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~G~l~dr~~~~r~~~~ 324 (452)
T PRK11273 251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFRGNRGAT 324 (452)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCCcchH
Confidence 888888887777776666666777888876533 478888899888888888888888 455555555 344322
Q ss_pred H-HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh-h
Q 011997 358 R-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA-G 435 (473)
Q Consensus 358 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~ 435 (473)
. ....+..+....+.. .. ....+. ..+.....+...............|.+|++.||+++|+.+...++|+.+ +
T Consensus 325 ~~~~~~l~~~~~~~~~~-~~--~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g 400 (452)
T PRK11273 325 GVFFMTLVTIATIVYWL-NP--AGNPTV-DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 400 (452)
T ss_pred HHHHHHHHHHHHHHHHH-hc--ccChHH-HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh
Confidence 2 222222222222211 11 111111 1122222222222222333455678899999999999999999998765 7
Q ss_pred hhhhhHHHHHhhhc
Q 011997 436 PAGGGALFSWAQKR 449 (473)
Q Consensus 436 ~~~~g~l~~~~g~~ 449 (473)
|.+.|.+.|+.|..
T Consensus 401 ~~v~g~l~~~~g~~ 414 (452)
T PRK11273 401 SAIVGYTVDFFGWD 414 (452)
T ss_pred hhhHHHHHHHhcch
Confidence 99999999998743
No 48
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.7e-29 Score=240.91 Aligned_cols=352 Identities=14% Similarity=0.115 Sum_probs=250.1
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+.+..+...+......|.+|.+.++++.+..+ .++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 344555667778899999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCc
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 203 (473)
+.++++++++++.++++|+++|++.+...+. ..++.|++|+++|++++++......+|..+||.+++.+.+ +
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~ 166 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------F 166 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h
Confidence 9999999999999999999999988765554 7889999999999999999999999999999999999987 3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHHH-HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccc
Q 011997 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (473)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (473)
+||| ..+.+.++..++..+ ..+.+||++++++++.+ .+. ..+.+++++|||
T Consensus 167 ~gw~---------~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~~------------------~~~~~~~ll~~~ 218 (413)
T PRK15403 167 VHWK---------VLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-AKS------------------VLRDFRNVFRNR 218 (413)
T ss_pred cCHH---------HHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-hHH------------------HHHHHHHHHcCH
Confidence 4444 444666655555443 34567886542211100 000 011345678999
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHH
Q 011997 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (473)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 362 (473)
.++...+...+.......+....|.++.. .+|+++.+.++.......+.+++..+..++.+|+.++|. ......
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-----~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~ 292 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILID-----AGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF-IWRAVP 292 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH-HHHHHH
Confidence 99988777776666656665566665443 358899999999888888888877766666666544443 222222
Q ss_pred HHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
+..++..++........ ..+....+...+.+.+.....+......-. -....+|++.++.+.....+..+++...+++
T Consensus 293 ~~~ig~~l~~~~~~~~~-~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 293 IQLVGLALLIVGNLLWP-HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222211110011 122222333333344444455555432211 2233479999999999999999999999998
Q ss_pred HHH
Q 011997 443 FSW 445 (473)
Q Consensus 443 ~~~ 445 (473)
.++
T Consensus 371 ~~~ 373 (413)
T PRK15403 371 WFN 373 (413)
T ss_pred HHc
Confidence 877
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=8.4e-30 Score=242.98 Aligned_cols=362 Identities=14% Similarity=0.127 Sum_probs=246.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
|.+...+++.++.........+.++.+.+|+|.++.+ .+++.+.+.+++.+++++.|+++||+||||++..+..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~ 86 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLL 86 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4555667777777777777777888888999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh---c-cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHH-HHHHHHHHHhc
Q 011997 121 SVVIFNTLFG---L-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLA 194 (473)
Q Consensus 121 ~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~i~~~l~ 194 (473)
+.+++.+++. . .++++.+++.|++.|++.+...+. .+.+.|.+|+++|++++|+.+...++|. .++|.+++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9988876542 3 357888999999999987776664 7888899999999999999999999997 68999999888
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCc
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
+ .+||+..+ |+..+.. .+..++..+..+|.+++.+++ + +++. ++....
T Consensus 167 ~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~-~~~~---------------~~~~~~ 214 (402)
T TIGR00897 167 P-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQ-T-REKF---------------SELGKA 214 (402)
T ss_pred c-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCccccc-C-Ccch---------------hhHHHH
Confidence 7 45554332 3322211 111222233344432211111 0 0000 000112
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
.++++|+|+++...+..++..........+.|.|.. ++|++..+.+.......++..++.... +++.||.+||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~~~~~~~~~~~~~ig~~~~-g~l~dr~~~~ 287 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVA------ELGFSTSEWLQIWGTFFFTNIVFNVIF-GIVGDKLGWM 287 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCCChhHHHHHHHHHHHHHHHHHHHH-HHHHHhhcch
Confidence 346788898887777766666666666667776643 258888999998888899999999855 5556667777
Q ss_pred HHHH-HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHH
Q 011997 355 MVAR-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 433 (473)
Q Consensus 355 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 433 (473)
+... .+.+...+....+...........+. ..+..+..+.+.....+. .....+. ++++||++.|+.+...++++.
T Consensus 288 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~ 364 (402)
T TIGR00897 288 NTVRWFGGVGCGIFTLALYYIPQHFGHSFAV-ALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSAGLSAF 364 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccCCcHHH-HHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHHHHHHH
Confidence 6553 22222223222222221111111222 222333333333333343 3445564 557899999999999999999
Q ss_pred hhhhhhhHHHHHhhhcc
Q 011997 434 AGPAGGGALFSWAQKRL 450 (473)
Q Consensus 434 ~~~~~~g~l~~~~g~~~ 450 (473)
++|.+.|.+.|..|...
T Consensus 365 ~gp~i~g~l~~~~g~~~ 381 (402)
T TIGR00897 365 LAPAIAVLFIGFFGAIG 381 (402)
T ss_pred HHHHHHHHHHhhcchHH
Confidence 99999999999877543
No 50
>PRK10054 putative transporter; Provisional
Probab=99.98 E-value=3.3e-30 Score=244.55 Aligned_cols=354 Identities=14% Similarity=0.157 Sum_probs=257.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
|.++.+.+..++...+.....+.+|.+ .+++|.+..+ .|++.+.+.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 445666677888888888888888755 5779999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
++..++.++.+++++++.++++|.+.|.+.+...+. .++..|..|+++|++++++.+...++|.+++|.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999999888876666665 8899999999999999999999999999999999998864
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
.||+..| ...++..++.. ...+++||+++++++++ ++ ....++
T Consensus 158 -----~g~~~~f---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~ 201 (395)
T PRK10054 158 -----QSINLPF---------WLAAICSAFPLVFIQIWVQRSEKAIATET---GS-------------------VWSPSV 201 (395)
T ss_pred -----hccCcHH---------HHHHHHHHHHHHHHHHHHhccccccccch---hh-------------------hhhhhh
Confidence 3455444 44444444443 33344565432211100 00 011256
Q ss_pred ccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHH
Q 011997 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (473)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 357 (473)
.+|+|+++...+..++.......+..+.+.|.... .+.+.+....+.......+.....+...+++.+| .++++.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHH
Confidence 78888888777766665555444444555554322 2346677778888888777777776655565554 5777777
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhh
Q 011997 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (473)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 437 (473)
..+..+..+....+.... ...+ ...+.....+.+.....|.....+.+..|++.++++.+..+ ...+|..+||.
T Consensus 278 ~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~ 351 (395)
T PRK10054 278 TAGTLCFVIGLVGFIFSG----NSLL-LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPL 351 (395)
T ss_pred HHHHHHHHHHHHHHHHcc----hHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHH
Confidence 777666655554443211 1122 22233344445555556777888889999999999998765 67799999999
Q ss_pred hhhHHHHHhhhc
Q 011997 438 GGGALFSWAQKR 449 (473)
Q Consensus 438 ~~g~l~~~~g~~ 449 (473)
++|.++|+.|..
T Consensus 352 ~~G~l~~~~g~~ 363 (395)
T PRK10054 352 VSGVILTTLPPW 363 (395)
T ss_pred HHHHHHHHcChh
Confidence 999999998754
No 51
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.98 E-value=2.2e-30 Score=252.10 Aligned_cols=376 Identities=13% Similarity=0.108 Sum_probs=255.5
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHH----------------------HhcccccchhhhhhhhHHHHHHHHH
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFG 94 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (473)
+.++.....++++..+++.++...+...+.+.+ |++.+..+ .|++.+.+.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~ 88 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYG 88 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHH
Confidence 334455556777777888888888877776665 67788877 99999999999
Q ss_pred HHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc--cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhh
Q 011997 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG 171 (473)
Q Consensus 95 ~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~ 171 (473)
+.+++++.|+++||+|||+++..+.++++++.+++.+ ..+++.+++.|+++|++.+...+. ..+++|++|+++|+++
T Consensus 89 ~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 168 (465)
T TIGR00894 89 QIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRL 168 (465)
T ss_pred HHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHH
Confidence 9999999999999999999999999999999888754 356889999999999999998885 8999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccCCCc-ccccccccCCcchhHHHHHHHHHHHHHHHH-hhcccCcCCCCCCCcc
Q 011997 172 LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDS 249 (473)
Q Consensus 172 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~ 249 (473)
+++...+..+|..++|++++.+.+ . .|||..| .+.++..++..+.. ...+|+|+.++..+++
T Consensus 169 ~~~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f---------~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 232 (465)
T TIGR00894 169 LGMSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIF---------YVFGIVGCAWSLLWFVFPADDPSIHPCISKF 232 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeeh---------hhhhHHHHHHHHHHHHHhcCCcccCCCCCHH
Confidence 999999999999999999999987 4 3666555 55555555554443 3455555433222111
Q ss_pred hhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHH
Q 011997 250 CDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVL 329 (473)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 329 (473)
++ +..++.. +.++++.+.+..++++++++.++...+..++.......+..++|.|+.. .+|++..+.++..
T Consensus 233 ~~---~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-----~~g~s~~~~g~~~ 303 (465)
T TIGR00894 233 EK---KYINSSL-QGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW-----VLRVSGKENGLLS 303 (465)
T ss_pred HH---HHHHhhc-ccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCcChHHhHHHH
Confidence 11 1111100 0011111123357788999999988888888777777777788877643 3588999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhhhh-----HHH-HHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011997 330 AITGFSLLVFQLSLYPFLERILGPI-----MVA-RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITG 403 (473)
Q Consensus 330 ~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
+...++..++..+.+ ++.||.+++ ... .....+.........+.........+. ..+...+.+.+.....+.
T Consensus 304 ~~~~~~~~i~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~ 381 (465)
T TIGR00894 304 SLPYLFAWLCSIFAG-YLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYL-TIIILTLANAVSSGPLAG 381 (465)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHH-HHHHHHHHHHHhhhhhhh
Confidence 998999999888544 444443322 111 111111111111111111110111111 222222222333333344
Q ss_pred HHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 404 LFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
......+..| +.+|.+.|+.++.+.+++.++|.+.|.+.+..
T Consensus 382 ~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~ 423 (465)
T TIGR00894 382 VLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQD 423 (465)
T ss_pred hhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCC
Confidence 4445556555 59999999999999999999999999988753
No 52
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.98 E-value=8.1e-30 Score=247.41 Aligned_cols=360 Identities=12% Similarity=0.069 Sum_probs=233.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
++.+...+...+....+.....+..|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34555666777777777778888999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
++++++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.+...++|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776655667889999999999999999877777887777666554321000
Q ss_pred --CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccc
Q 011997 200 --YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (473)
Q Consensus 200 --~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
.....|| |..+.+.+++.++..+..+++++++++.+.+ + . ++. .+.++.+....+++
T Consensus 189 ~~~~~~~gW---------r~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~----~-~----~~~---~~~~~~~~~~~~~~ 247 (476)
T PLN00028 189 AGAPSFTAW---------RIAFFVPGLLHIIMGILVLTLGQDLPDGNYR----E-L----KKS---GTMPKDSFSKVLRY 247 (476)
T ss_pred cCCcchhhh---------HHHHHHHHHHHHHHHHHHHHHcCcCCCCchh----h-H----Hhc---CccccccHHHHHHH
Confidence 0011344 4444666655555444444444332211100 0 0 000 00000000122455
Q ss_pred ccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh---
Q 011997 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--- 354 (473)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 354 (473)
.++++++|...+.+++..........+.|.|+. +.+|++..+++...+..+++.+++++ ..+++.||++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~-----~~~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r~~~ 321 (476)
T PLN00028 248 GVTNYRTWILALTYGYSFGVELTMDNIIAEYFY-----DRFGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARRFGM 321 (476)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhcCc
Confidence 677888877766665555444555566676653 23589999999999999999999998 555566666644
Q ss_pred --H--HHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH
Q 011997 355 --M--VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (473)
Q Consensus 355 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (473)
+ .......+..+...++... . ..+. .....++.+.+.....+..+.+..+. +++.+|++.|+.+....+
T Consensus 322 ~~r~~~~~~~~~l~~i~~~~~~~~---~--~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~l 394 (476)
T PLN00028 322 RGRLWALWIVQTLGGVFCIWLGRA---N--SLGA-AIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNV 394 (476)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc---c--hHHH-HHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccH
Confidence 1 2112222222212211111 1 1111 11222222233333344455556664 457899999998776666
Q ss_pred HHHhhhhhh
Q 011997 431 FKAAGPAGG 439 (473)
Q Consensus 431 g~~~~~~~~ 439 (473)
|+.++|.+.
T Consensus 395 g~~i~~~l~ 403 (476)
T PLN00028 395 GAVLTQLLF 403 (476)
T ss_pred HHHHHHHHH
Confidence 666666543
No 53
>PRK11043 putative transporter; Provisional
Probab=99.98 E-value=5.9e-29 Score=237.63 Aligned_cols=349 Identities=17% Similarity=0.137 Sum_probs=251.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
+..+.+...+..+....+.|..|.+.+++|.++++ .+++.+++.++..++++++|+++||+|||+++..+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 34444456666777888889999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 201 (473)
.++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|++..+.......+|..++|.+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 155 (401)
T PRK11043 82 ALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------ 155 (401)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999987776665 8889999999999999999988899999999999999988
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccccc
Q 011997 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (473)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (473)
.+| |+..+....+..++..+..++++|+++++++ + + .+.+.++++|+
T Consensus 156 -~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-------------------~~~~~~~~~~~ 202 (401)
T PRK11043 156 -HFG---------WQAIFATLFAITLLLILPTLRLKPSKKARKQ---S-Q-------------------DALTFKQLLKS 202 (401)
T ss_pred -cCC---------hHHHHHHHHHHHHHHHHHHHHcCCCCCcccc---c-h-------------------HHHHHHHHHcC
Confidence 344 4444455555555554445555554322110 0 0 01134556777
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
|+++...+...+.......+..+.|.+.. +.|+++.+.|.......++.++++. ...++.||+++++......
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~ 275 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILE------QMGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLL 275 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHH
Confidence 77765555444444444444455555432 2588999999888877888888877 4556666677777665555
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
....+....+.......... +..........+.......+.......+..| +++|++.|+.+..+..++..++.+.|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~ 353 (401)
T PRK11043 276 VLFAVSVIAIWLASLLSHPS-LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHHHHHHHHHHhccCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433322222111112 2222233334444555666766666666565 689999999999999999999999999
Q ss_pred HHHH
Q 011997 442 LFSW 445 (473)
Q Consensus 442 l~~~ 445 (473)
+.+.
T Consensus 354 l~~~ 357 (401)
T PRK11043 354 LIST 357 (401)
T ss_pred ccCC
Confidence 9764
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=1.4e-29 Score=242.96 Aligned_cols=362 Identities=20% Similarity=0.287 Sum_probs=249.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+....+++..++..+......+.+|.+.+++|.+..+. ...+.|++.+++.++..++++++|+++||+|||++++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34556778888888888899999999999999886541 11225889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 200 (473)
..+++.+++.++++++.+++.|++.|++.+.......++.|.+|+++|+++.++......+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999998899999999999999999866544457888999999999999999999999999999999999987
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccc
Q 011997 201 PNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (473)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (473)
.++|| ..+.+..+..++. +...+++||++++.+++++ .+. ....+.+
T Consensus 168 --~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~ 215 (408)
T PRK09874 168 --SYGLR---------PVFFITASVLFLCFLVTLFCIRENFQPVSKKEM--LHM-------------------REVVTSL 215 (408)
T ss_pred --HhCHH---------HHHHHHHHHHHHHHHHHHHHhccCcccccchhh--hHH-------------------HHHHHhC
Confidence 44444 4445555444443 3334456665322111100 000 0112334
Q ss_pred ccchhHHHHH-HHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 280 KNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
++++++.... ..............+++.|..... ...+......+......+++.+++.. ..+++.||.+|++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~l~~~~~~~-~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELA--GNVSNIAFISGMIASVPGVAALLSAP-RLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccchhHH
Confidence 5666544322 222222232333344555543211 00011112345566666777777776 4556677788888887
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.+.....+..+...... ..+ ...+..++.+.+.....+.......+..|++.+|+..++.+....+|..+||.+
T Consensus 293 ~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~ 366 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQ-----TPL-QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLM 366 (408)
T ss_pred HHHHHHHHHHHHHHHhc-----cHH-HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHH
Confidence 77766555544433221 122 233333444555566677777777888899999999999999999999999999
Q ss_pred hhHHHHHhhhc
Q 011997 439 GGALFSWAQKR 449 (473)
Q Consensus 439 ~g~l~~~~g~~ 449 (473)
.|.+.+..+..
T Consensus 367 ~G~l~~~~g~~ 377 (408)
T PRK09874 367 GAAISANYGFR 377 (408)
T ss_pred HHHHHhhcchh
Confidence 99999887643
No 55
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=4.1e-29 Score=236.96 Aligned_cols=344 Identities=15% Similarity=0.130 Sum_probs=239.8
Q ss_pred HHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH-HHHHHHHH
Q 011997 48 IIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (473)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~~~ 125 (473)
+..++..++.....|.+|.+ .+++|.+..+ .|++.+++.+...+.+++.|+++||+||||.++. +.....++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 45677788888889999865 5789999998 9999999999999999999999999999987654 56666677
Q ss_pred HHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhh--hHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 011997 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (473)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 202 (473)
.++++++++++.+++.|++.|.+.+...|. .++..|+.|+++|.+. .+......++|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 788889999999999999998876666675 7888898888877755 577788889999999999999987
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccccc
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (473)
.++||..+.+.++..++.. +..+++||.+++++++++ ..+.++.+++
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 3445555566666555443 334557876543221110 0011234566
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
++++......++............|.|+. +.+|.++.+.+.......+..+++.. ..+++.||.++|+....+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLII-----HELGLPDKLAGLMMGTAAGLEIPFML-LAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhcchhHHHHHH
Confidence 66665544444433333333344555543 23588888999888777666777766 5556667778888777665
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
....+....+... ...+. ......+.+.+.....+....+..|..|+ +++++.++.+...++|..++|.+.|.
T Consensus 273 ~~~~~~~~~~~~~-----~~~~~-~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~ 345 (375)
T TIGR00899 273 LAGVAFYTGLAAD-----NSLWA-LLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGI 345 (375)
T ss_pred HHHHHHHHHHHHH-----HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544433332221 12222 22333333444445566667777887774 67799999999999999999999999
Q ss_pred HHHHhhhc
Q 011997 442 LFSWAQKR 449 (473)
Q Consensus 442 l~~~~g~~ 449 (473)
+.+..|..
T Consensus 346 ~~~~~g~~ 353 (375)
T TIGR00899 346 LAERWSYH 353 (375)
T ss_pred HHHhccch
Confidence 99987643
No 56
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.1e-31 Score=238.24 Aligned_cols=379 Identities=16% Similarity=0.077 Sum_probs=256.0
Q ss_pred CCCCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchh
Q 011997 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (473)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~ 114 (473)
....+++.+..+++...++.++.+.+....+.+.+.||++++. .|++.+.+.+.+.+++|++|+++|||+||++
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v 100 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRV 100 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceE
Confidence 3445567778899999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 115 IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
+.+|..++.++.+.++++..+|+++++|.+.|+|.+.+.|+ +++++|.+|.++|++.+++++.+..+|..+|.+.+..+
T Consensus 101 ~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 99999999999999999999999999999999999999885 99999999999999999999999999999999999988
Q ss_pred ccccccCCCccc-ccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhccc
Q 011997 194 AQPAEKYPNLFS-SESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (473)
Q Consensus 194 ~~~~~~~~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (473)
.. +.+ ||+.| | ..+++.++. ++..++++|+++..+++.+.+.+. .......
T Consensus 181 a~-------~~~~Wr~af-----~----~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~ 233 (493)
T KOG1330|consen 181 AS-------LTFWWRWAF-----R----GSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSV 233 (493)
T ss_pred cc-------CccceEEEE-----E----eehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccch
Confidence 87 334 55554 3 334444443 455566777655433222211110 0000111
Q ss_pred CCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh-
Q 011997 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI- 350 (473)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~- 350 (473)
-++.+.+.|++.+....+.+....+...++.-+.|.+.+..+... |++..+.-++..+...++.+|.. .++.+.|+
T Consensus 234 ~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~--~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~~ 310 (493)
T KOG1330|consen 234 WKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELI--GFDHNATLIFGGVTCAGGSLGVL-FGGIISDKL 310 (493)
T ss_pred HHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHh--CCccccchhhhhHHHhhchhhhe-ehHHHHHHH
Confidence 123344556666666666666666665666556666555443333 34444444555555555666655 45555554
Q ss_pred ---hhhhHHHHHHHHHHHHH----HhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHH
Q 011997 351 ---LGPIMVARIAGVLTIPL----LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI 423 (473)
Q Consensus 351 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 423 (473)
+.+..........+..+ ...+........ ......+++.++.-............+..+.+|++.|.++.++
T Consensus 311 ~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~-~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~ 389 (493)
T KOG1330|consen 311 SRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS-SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYAL 389 (493)
T ss_pred HHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHH
Confidence 32212222222222111 111111111111 1222222222222122222334455677788999999999999
Q ss_pred HHHHHH-HHHHhhhhhhhHHHHHhhhcc
Q 011997 424 AMTGMS-LFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 424 ~~~~~~-~g~~~~~~~~g~l~~~~g~~~ 450 (473)
...+.. .|.+-+|.+.|.+.|+.-..+
T Consensus 390 ~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 390 DTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 976655 555566669999999886655
No 57
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=2.9e-30 Score=248.89 Aligned_cols=375 Identities=13% Similarity=0.018 Sum_probs=240.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
+....+.......+........|.+.+ +|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 29 FLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 334444555556666666667777765 5999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcc----ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 011997 123 VIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (473)
Q Consensus 123 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 197 (473)
+++.++.+.. ++++.+.+.|++.|++.+...+ ....+.|++|+++|++++++.+....+|..++|.+.+...+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~- 180 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW- 180 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH-
Confidence 9998887664 4677888999999999887766 488889999999999999999999999999998887765431
Q ss_pred ccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccC-Ccc
Q 011997 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA-TPK 275 (473)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 275 (473)
..+|| ..+...++..++. ++..+++||+++..+.++.++.+. +..+...+.++++.+.+ ...
T Consensus 181 -----~~~w~---------~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 244 (438)
T TIGR00712 181 -----FNDWH---------AALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN--DYPDDYNEKAEQELTAKEIFM 244 (438)
T ss_pred -----hhhhH---------HHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc--ccccccccccccccchHHHHH
Confidence 23444 4445655554443 445566777654321111100000 00000000000000000 001
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH
Q 011997 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (473)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 355 (473)
+..+|++.++...+..++..........+.|.|+... .|+++.+.+....+..+.++++++ ..+++.||.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~ 318 (438)
T TIGR00712 245 QYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFKGN 318 (438)
T ss_pred HHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccCc
Confidence 2367888888877666665555556666777776542 488999999999988999999988 5555656654322
Q ss_pred HHHHHHHHHHHHHh-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHH-H
Q 011997 356 VARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK-A 433 (473)
Q Consensus 356 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ 433 (473)
....+......... ...+.. ......+. .....+..+....+..........|..|++.||++.|+.+...++++ +
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~ 396 (438)
T TIGR00712 319 RGATGVFFMTLVTIAVIVYWM-NPAGNPLV-DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSV 396 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHh-cCCCchHH-HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhh
Confidence 11222222111111 111111 11111121 11111111111112122223456688999999999999999888875 6
Q ss_pred hhhhhhhHHHHHhhhc
Q 011997 434 AGPAGGGALFSWAQKR 449 (473)
Q Consensus 434 ~~~~~~g~l~~~~g~~ 449 (473)
++|.+.|.+.|+.|..
T Consensus 397 ~gp~l~G~l~~~~g~~ 412 (438)
T TIGR00712 397 AASAIVGYTVDFFGWD 412 (438)
T ss_pred hcchhHHHHHHhccch
Confidence 8999999999987743
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=1.6e-28 Score=234.03 Aligned_cols=354 Identities=14% Similarity=0.147 Sum_probs=247.7
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
++++.+........+..+......|.+|.+.+++|.++.+ .+++.+.+.++..++++++|+++||+|||+++..
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~ 78 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILV 78 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 3456666666666677788888889999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+..+..++.+++.++++++.+++.|++.|++.+...+. ..+..|.+++++|+++.+..+.+..++..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~- 157 (394)
T PRK11652 79 GMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT- 157 (394)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999999999998877775 7888999999999999999999999999999999999987
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
..| |+..+.+.++..++. .+..++.||+++.+++++ + . ....
T Consensus 158 ------~~g---------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~------------------~~~~ 200 (394)
T PRK11652 158 ------LFG---------WRACYLFLLLLGAGVTFSMARWMPETRPADARRT---R-V------------------LASY 200 (394)
T ss_pred ------ccC---------hHHHHHHHHHHHHHHHHHHHHhCCccCccccchh---H-H------------------HHHH
Confidence 344 444445554444433 334456777643321110 0 0 1123
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH
Q 011997 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (473)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 355 (473)
++.+|+|.++...+..+........+....+.+.. +.+|+++.+.+.......++.++++. ..+++.||.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~~~~~~ 274 (394)
T PRK11652 201 RTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMG-----AVLGLSSMTVSILFILPIPAAFFGAW-FAGRPNKRFSTLM 274 (394)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 45667777766555444433332333333333332 23588899999988888888888877 4555555555322
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhh
Q 011997 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (473)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 435 (473)
.. ......+....+...........+. ......+.+.+.....+.......+..| +++|++.++.+....+|..++
T Consensus 275 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~ 350 (394)
T PRK11652 275 WQ--SVICCLLAGLLMWIPGWFGVMNVWT-LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLA 350 (394)
T ss_pred HH--HHHHHHHHHHHHHHHHHhccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHH
Confidence 22 2222222212111111111111222 2333344445555667777777778776 688999999999999999999
Q ss_pred hhhhhHHHHH
Q 011997 436 PAGGGALFSW 445 (473)
Q Consensus 436 ~~~~g~l~~~ 445 (473)
+.+.+.+.+.
T Consensus 351 ~~~~~~~~~~ 360 (394)
T PRK11652 351 ALLSAMLPQT 360 (394)
T ss_pred HHHHHHccCC
Confidence 9988877543
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=1.1e-28 Score=233.74 Aligned_cols=345 Identities=13% Similarity=0.095 Sum_probs=254.3
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhh----HHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGTA 120 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~----~~~~~ 120 (473)
.+.+..+..........|.+|.+.+|+|.+..+ .|++.+++.+...++++++|+++||+|||+.. ..+..
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 81 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 356667777788889999999999999999999 99999999999999999999999999985433 22222
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
+..+ ..+..+++++.+++.|.++|.+.+...|. .++..|+ +++|++.++......++|.+++|++++.+.+
T Consensus 82 l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~---- 153 (382)
T TIGR00902 82 IFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG---- 153 (382)
T ss_pred HHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH----
Confidence 2222 24446789999999999999887766665 6666554 5788999999999999999999999999998
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (473)
++|||..| .......++.+ ..+.++|++++++++++ + +++.....++++
T Consensus 154 ---~~g~~~~f---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~l 202 (382)
T TIGR00902 154 ---MFDEQNIL---------AILTAGLAFML-IGFLIKPTIPPKDAIPE--D----------------ESQGDSAFIALL 202 (382)
T ss_pred ---HcChhHHH---------HHHHHHHHHHH-HHHHcCCCCCCCccccc--c----------------ccccchhHHHHH
Confidence 55665544 44433322222 22333433211111100 0 001112356788
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHH
Q 011997 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (473)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (473)
|+|+++...+..++.......+..+.+.|... .|.++.++|.......++.++... ..+++.||+++++.+..
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~~-~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIFA-FSNKLFQNCSARDLLLI 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HhHHHHhhCCHHHHHHH
Confidence 99999988888887777777777777776532 589999999999988888888877 56667777899999888
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHH-HHHHHHHHhhhhh
Q 011997 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAG 438 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~ 438 (473)
+.+...+....+.+. .....+....++.++......+....++++. |++++++++++++ ....+|..++|.+
T Consensus 276 ~~~~~~~~~~~~~~~------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 276 SAIACVGRWAIIGAI------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred HHHHHHHHHHHHHhH------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777766542 2223344556666667777777788888887 9999999999987 4578999999999
Q ss_pred hhHHHHHhhh
Q 011997 439 GGALFSWAQK 448 (473)
Q Consensus 439 ~g~l~~~~g~ 448 (473)
+|.++|+.|.
T Consensus 349 ~G~l~~~~g~ 358 (382)
T TIGR00902 349 AGFIYPTLGA 358 (382)
T ss_pred HHHHHHhccH
Confidence 9999999864
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=2.1e-28 Score=229.87 Aligned_cols=336 Identities=16% Similarity=0.097 Sum_probs=241.4
Q ss_pred hhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcccc
Q 011997 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (473)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
.......+.+|.+.+|+|.+.++ .+++.+.+.++..+++++.|+++||+||||++.++.++..++.+.+ .+++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 34466788999999999999999 9999999999999999999999999999999999998888888877 7889
Q ss_pred HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCC
Q 011997 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (473)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~ 213 (473)
.+.+++.|++.|++.+...+. ...+.|++| ++|+++++..+...++|..+++.+++.+.+ ..+ .
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~ 151 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------G 151 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------h
Confidence 999999999999998886664 778888886 689999999999999999999999998876 211 1
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHH
Q 011997 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (473)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (473)
.||..+...++..++. ...++||.+++++++++ ......++.+|+|.++...+...+
T Consensus 152 ~w~~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 152 HWQQALAWWALPALLA--LLAWIPQVRRRVAANQT---------------------TTRLTPVRIWRSPLAWQVTVFFGL 208 (355)
T ss_pred hHHHHHHHHHHHHHHH--HHHHhhhhccccCCCCC---------------------CCCCCCchhhcCHhHHHHHHHHHH
Confidence 2444444433332222 22334544322111000 011234567788888776666665
Q ss_pred HHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh-hhhHHHHHHHHHHHHHHhHHH
Q 011997 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYP 372 (473)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (473)
..........+.|.|+.. .|++..+.+...+...++.++++++. +++.||. +|++....+..+..++...+.
T Consensus 209 ~~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~~~-g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASALLI-PALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHhH-HHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 555555666677766532 48899999999999999999999854 4555666 566666666665555554443
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQN-RAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
+... ...+ . ...+.+++.....+....... +..+++++++..++.+...+++..++|.+.|.+.|+.|.+
T Consensus 282 ~~~~---~~~~--~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 282 FAPM---HGLW--A--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred Hhhh---hHHH--H--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3221 1111 1 123334445555566555544 4445677899999999999999999999999999998864
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=3.2e-29 Score=239.39 Aligned_cols=356 Identities=14% Similarity=0.100 Sum_probs=241.9
Q ss_pred HHhhhhhhhhhhhHHHHHHHhcc--cccchhhhhhhhHHHH-----HHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH
Q 011997 51 LCTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVGS-----SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (473)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (473)
+.+.++...+....+.+.+++.. ++++ .+.+.+ ...++..+++++.|+++||+|||+++..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~ 76 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMG 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHH
Confidence 45677888888888888877653 3333 343333 3444556789999999999999999999999999
Q ss_pred HHHHHhhccccHH--------HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 124 IFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 124 ~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
++.++++++++++ .+++.|+++|++.+...+. .+++.|++|+++|++..+..+.+..+|..+++.++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 77 IGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875 4889999999998887775 999999999999999999999999999999999887765
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCc
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
.. .+....- .++||.++.+..+..++........||++++++++++ +++....
T Consensus 157 ~~-------~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (394)
T TIGR00883 157 YL-------LGDDALL-EWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGP 209 (394)
T ss_pred Hh-------cCHHHhh-ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCC
Confidence 31 1100001 4456666666665555554444556665432111000 0111223
Q ss_pred cccccccch--hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh
Q 011997 275 KKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (473)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~ 352 (473)
.++.+++++ ++......++..........+.|.|... .+|.+..+.+.......++..++.+ ..+++.||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQ-----TLGLSANSALLVLMLSLILFFITIP-LSGALSDRIG 283 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 444555554 5555555555554445555566666532 2578888999999888999999888 5556677788
Q ss_pred hhHHHHHHHHHHHHHH-hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHH-HHHHHH
Q 011997 353 PIMVARIAGVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGMSL 430 (473)
Q Consensus 353 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~ 430 (473)
||+.......+..+.. ........ ....+ .......+.+.......+.......|.+|++.|+++.++. +....+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 284 RRPVLIIFTVLAALLAVPLLMALLD--SGSFT-LFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAI 360 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--CCchH-HHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHH
Confidence 8887665444333322 12111111 11222 2233334444555566777889999999999999999985 455678
Q ss_pred HHHhhhhhhhHHHHHhhh
Q 011997 431 FKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~ 448 (473)
|..++|.+.|.+.|+.|.
T Consensus 361 g~~~~p~~~g~l~~~~g~ 378 (394)
T TIGR00883 361 FGGFAPYIAAALVAMTGD 378 (394)
T ss_pred HhhHHHHHHHHHHHHcCc
Confidence 899999999999998874
No 62
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.7e-28 Score=231.76 Aligned_cols=365 Identities=13% Similarity=0.083 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
.+..++...++.++..+...+.+|.+++++|.+..+ .|++.+.+.+++.+++++.|++.||+|||++++.+..+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 355667777888888899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc---cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 011997 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (473)
Q Consensus 122 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 197 (473)
++++.+++.. .++++.+++.|++.|+|.|...+. ..++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999888644 468999999999999999988775 889999999999999999999999999999999999886421
Q ss_pred ccC-CCccccccc---------ccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhh
Q 011997 198 EKY-PNLFSSESL---------FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (473)
Q Consensus 198 ~~~-~~~~gw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (473)
... ....-++.. -...+||.++...++..++..+...+.++++.++++ ++ ++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~-~~-~~---------------- 219 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD-AK-QI---------------- 219 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc-cc----------------
Confidence 000 000000000 001346777766666555443333232221111100 00 00
Q ss_pred hcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
+.....++++|+|+++...+..+++...+.+...+++.|.... ..+.+....+...+....+..++++ .+.++
T Consensus 220 --~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~----~~~~~~~~a~~~~~~~~~~~~vGR~-~~~~l 292 (410)
T TIGR00885 220 --SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL----IPGMTAGFAANYNIGAMVIFFISRF-IGTWL 292 (410)
T ss_pred --cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0011234567888888877777777777666666677665321 1244444455555555566777777 66777
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHH
Q 011997 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (473)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (473)
.||.++++.+....+...+...+..... + . . ........+++...++|..++...+..+++.+..+.++...
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~---~--~-~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~- 364 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAG---G--H-V-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA- 364 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcC---C--h-H-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-
Confidence 7777888887777777666666554421 1 1 1 12333344456677789999999998886665445554443
Q ss_pred HHHHHHhhhhhhhHHHHHh
Q 011997 428 MSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 428 ~~~g~~~~~~~~g~l~~~~ 446 (473)
.+|+++.|.+.|.+.|..
T Consensus 365 -~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 365 -IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred -HhccchHHHHHHHHHHHh
Confidence 399999999999999965
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=1.7e-28 Score=230.57 Aligned_cols=326 Identities=24% Similarity=0.348 Sum_probs=264.0
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+....+....+.....+..|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+.+..+..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345567778888889999999999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCc
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 203 (473)
+.+...++++++.+++.|++.|++.+...+. .+++.|++|+|+|++.+++.+....+|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 148 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------- 148 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccch
Q 011997 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (473)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (473)
..+|+..+....+..++..+...+++ |.
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 33344444555555555444444333 33
Q ss_pred hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH-HHHHHHH
Q 011997 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (473)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 362 (473)
++...+..++..........+.+.+... ..|.+..+.+.......++..++..+ ..++.||.+||+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQE-----VLGLSAAEAGLLLSLFGLGGILGALL-GGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHH
Confidence 4555555555555556666666665432 24789999999999999999999984 555666778888 7777777
Q ss_pred HHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
+..+......... ..........+.+.+.....+....+..|..|+++|++..|+.+...+++..++|.+.|.+
T Consensus 251 ~~~i~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 251 LAALGLLLLALAP------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHhc------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766655432 1233445555566666777888999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 011997 443 FSWAQK 448 (473)
Q Consensus 443 ~~~~g~ 448 (473)
.|..+.
T Consensus 325 ~~~~~~ 330 (352)
T cd06174 325 LDTGGY 330 (352)
T ss_pred hcccCc
Confidence 986554
No 64
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1e-27 Score=228.46 Aligned_cols=346 Identities=18% Similarity=0.149 Sum_probs=238.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (473)
.......+....+.....+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||++++.+.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 79 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFI 79 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHH
Confidence 3445556666777777889999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 011997 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (473)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 202 (473)
++.+++..+++++.+++.|+++|++.+...+. .+++.|.+|+++|+++.+..+....+|..++|.+++.+.+
T Consensus 80 i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~------- 152 (392)
T PRK10473 80 IASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML------- 152 (392)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 99999999999999999999999998887764 8999999999999999999999999999999999998877
Q ss_pred cccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccccc
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (473)
..||| ..+.+.++..++. ++..+.+||++++++++++ + . .+..++.+|+
T Consensus 153 ~~g~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~-~------------------~~~~~~~~~~ 202 (392)
T PRK10473 153 KFPWQ---------SLFYTMAAMGILVLLLSLFILKETRPARAPAAS--S-K------------------PRENSESLLN 202 (392)
T ss_pred CcChH---------HHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--c-h------------------HHHHHHHHhC
Confidence 34444 4445555444443 3344566776433211110 0 0 0012345667
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
++++...+...+.......+..+.|.+.. +.+|+++.+.+......+++.+++.. ..+++.||+++|+....+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~ 276 (392)
T PRK10473 203 RFFLSRLVITTLSVTVILTFVNTSPVLLM-----EQMGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQ 276 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHH
Confidence 76665444433333222333333343332 33588999999999999999999988 5566777889999888887
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
.+..++...+..... .+.......... .+.....+. ....+..|.++|+ |.......++..+++.+.++
T Consensus 277 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~g~~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~ 345 (392)
T PRK10473 277 VLFLAAGITLALSPS-----HAVSLFGITLIC-AGFSVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIW 345 (392)
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHH-HHHHHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHH
Confidence 766666555444321 111111111111 111111111 2223334544443 44455567788888888888
Q ss_pred HHHHhhhc
Q 011997 442 LFSWAQKR 449 (473)
Q Consensus 442 l~~~~g~~ 449 (473)
+.+..|..
T Consensus 346 l~~~~g~~ 353 (392)
T PRK10473 346 LAAVLGIS 353 (392)
T ss_pred HHHHhccc
Confidence 98887753
No 65
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=4e-28 Score=230.23 Aligned_cols=336 Identities=20% Similarity=0.227 Sum_probs=232.4
Q ss_pred hhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcccc
Q 011997 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (473)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
+...+..|.+|.+.+++|.++.+ .+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 45567779999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCC
Q 011997 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (473)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~ 213 (473)
++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .+|
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~-------- 143 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-------WFS-------- 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcC--------
Confidence 999999999999998887775 8999999999999999999999999999999999999987 334
Q ss_pred cchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHH
Q 011997 214 PYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (473)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (473)
|+..+...++..++. +...+++||+++++++++.+.+. .....++.+++|+++...+...
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 144 -WHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRT------------------TIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHH------------------HHHHHHHHHcChHHHHHHHHHH
Confidence 444445555554444 34445677754332211110000 0012345677777766655544
Q ss_pred HHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHH
Q 011997 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (473)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (473)
+.......+....|.++. +.+|+++.+.+.......++.++++. ..+++.||.++|+....+..+..+....+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYI-----ELNGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHcCHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 443333333333333322 23588999999999999999999988 455666778998888877765444332222
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHH-HHHHhhhhhh
Q 011997 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS-LFKAAGPAGG 439 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~ 439 (473)
..... +...+... +.............+.......+..| +.++++.++.+.... +|..+++.+.
T Consensus 279 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 279 VSALL-DLGFWALV-VGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHH-hhhHHHHH-HHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 11122211 11112222222333344455566555 899999999876543 5555555443
No 66
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=4e-29 Score=236.17 Aligned_cols=357 Identities=13% Similarity=0.081 Sum_probs=240.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
.+..++..++.........+..|. +.+++|.++.+ .+++.+++.+++.+++++.|+++||+|||+.++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 445677778888888899999995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-cHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc--
Q 011997 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (473)
Q Consensus 122 ~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-- 198 (473)
..++.+++++++ +++.+++.|+++|++.+...+...+++|++|+++|+++.++.....++|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999876665568899999999999999999998888888888877776654110
Q ss_pred -cCCCcccccccccCCcchhHHHH-HHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccc
Q 011997 199 -KYPNLFSSESLFGKFPYFLPCLC-ISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (473)
Q Consensus 199 -~~~~~~gw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.+...+||+.| . .. ..+..+..++.....+|++++++++++.+... +.. . .+++.....+
T Consensus 157 ~~~~~~~~w~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~---~~~~~~~~~~ 219 (366)
T TIGR00886 157 AGLPAHLAWGWAF-----V---IVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG--ARW----S---VGTGALGDQL 219 (366)
T ss_pred ccccccccccchh-----H---HHHHHHHHHHHHHHHHhcccCCcccccchhccccc--ccc----c---ccchhHHHHH
Confidence 011123455443 0 22 22222333344445566554322111100000 000 0 0000111345
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHH
Q 011997 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (473)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 356 (473)
+.+++|+++...+..++..........+.+.|... .+|+++.+.+.......+..+++++ ..+++.||+++|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 220 KVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKD-----QFGLSKVTAGAYASLGGLLGSLARP-LGGAISDRLGGARK 293 (366)
T ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHHHhh-ccchHHHhhccchh
Confidence 56788888777776666655555666677766543 3588999999988888888888887 55666777788777
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHH
Q 011997 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (473)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (473)
...+......+..++....... .................+...+..+....+..| +++|++.|+.+..+++|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 294 LLMSFLGVAMGAFLVVLGLVSP--LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6666555544444433221110 011111222222222223334455666677666 79999999999887765
No 67
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.9e-29 Score=225.21 Aligned_cols=366 Identities=14% Similarity=0.094 Sum_probs=281.9
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhH
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (473)
+...+.++.-++...+.+....+..+..+.+.+|+|+|++| .+++.++..+...+..++.|.+.||||.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34457777778888888888899999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc---cHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 117 MGTASVVIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
.+.++..+-++..+++. +++++++.+.+.|++.+.+.....++++++|||++|.++|+.. ..++|..+..+++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 99999999999998875 4459999999999999999888999999999999999999999 8999999998888888
Q ss_pred ccccccCCCcccccccccCCcchhHHHHHHHHHHH-HHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccC
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (473)
.. ..|+. .|+....+.....++ .+..++...|.|+.++..++...
T Consensus 163 ~~-------~~g~~------~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--------------------- 208 (417)
T COG2223 163 AV-------AFGFL------AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--------------------- 208 (417)
T ss_pred HH-------HHhhH------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------------
Confidence 87 44410 133333333333333 34555566666553222221110
Q ss_pred CccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh
Q 011997 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (473)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~ 352 (473)
...+.++++++.|.+.+.|+..+..+.++..++|.|+.+. ++.++.++|.......+.+.+.+. .+++++||+|
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~Rp-~GG~LsDR~G 282 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALARP-LGGWLSDRIG 282 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHHh-ccchhhhhcc
Confidence 2355678899999999999999999999999999887654 699999999988888888888888 7888999999
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHH
Q 011997 353 PIMVARIAGVLTIPLLTSYPYIAMLSG-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (473)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (473)
.+|+.........++............ ...........+..+.+...-....+-++...+| ++.|.+.|+....+.+|
T Consensus 283 g~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lG 361 (417)
T COG2223 283 GRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLG 361 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhcccc
Confidence 999888888877777766655432211 0111222222222222222233344555555555 58999999999999999
Q ss_pred HHhhhhhhhHHHHHhhhcc
Q 011997 432 KAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 432 ~~~~~~~~g~l~~~~g~~~ 450 (473)
+..-|...|...+.+|...
T Consensus 362 Gf~lp~~~g~~~~~tg~~~ 380 (417)
T COG2223 362 GFFLPLAFGVSLDLTGSYT 380 (417)
T ss_pred ccchhHHHHHHHHhcccHH
Confidence 9999999999999999543
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=4.6e-27 Score=228.51 Aligned_cols=360 Identities=13% Similarity=0.129 Sum_probs=246.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-----CCchh
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~ 114 (473)
+|+...++...+..+.......+.+|.+.++.|.+.++ .+.. +.....+ ++.+++|+++||+ ||||.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 34566677777788888888999999999999999888 8876 4444444 6899999999999 99986
Q ss_pred -hHHHHHHHHHHHHHhhcc---ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHH
Q 011997 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (473)
Q Consensus 115 -~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 189 (473)
++.+.+..+++...+++. ++++.+.+.+++.|++.+...+. .+++.|++|+++|+++.++...+..+|.++++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777664 47888999999999987777775 8999999999999999999999999999999999
Q ss_pred HHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhc
Q 011997 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (473)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (473)
+.++.+ . .++||..+.+.++..++..+..+++||++++.++ ++ +.. +
T Consensus 163 ~~~l~~-------~--------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~--~~~-~-------------- 209 (491)
T PRK11010 163 ALWLAD-------R--------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PK--TLE-Q-------------- 209 (491)
T ss_pred HHHHHh-------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-cc--chh-h--------------
Confidence 999886 1 1345555567666666655555567776432111 00 000 0
Q ss_pred ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHH-HHHHHHHHHHHhhHHHHH
Q 011997 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLE 348 (473)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~i~~~~~~~~~~ 348 (473)
....+.++.++++..+...+..++..........+.+.|+. +..|++..+.+.... ...++.+++.+ .++++.
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~-----~~~G~s~~~~g~~~~~~g~i~~iiG~l-l~G~L~ 283 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLI-----RGVGFDAGEVGLVNKTLGLLATIVGAL-YGGILM 283 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 00112345566666665555544444443344444554432 236899999999875 44567777777 667777
Q ss_pred HhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHH
Q 011997 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (473)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (473)
||.++++.+..+.++..+....+...... ....+. +....++..+..+...+...+...+..+++.+++..|+.+...
T Consensus 284 dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~-l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~ 361 (491)
T PRK11010 284 QRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYS-MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALS 361 (491)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 77788777665555444433332222111 112211 2222222222223334555677778889999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHhhh
Q 011997 429 SLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~~g~ 448 (473)
.+|..+++.+.|.+.|..|.
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~ 381 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGW 381 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCh
Confidence 99999999999999998764
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=5.1e-27 Score=222.39 Aligned_cols=340 Identities=13% Similarity=0.096 Sum_probs=237.9
Q ss_pred HHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCc----hhhHHHHHHHHHH
Q 011997 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr----~~~~~~~~~~~~~ 125 (473)
.+....+.+...|.+|.+.+|+|.+..+ .|++.+++.++..++++++|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4445566788899999999999999999 99999999999999999999999999994 3333222221 2
Q ss_pred HHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Q 011997 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (473)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 204 (473)
......+++++.+++.|++.|++.+...|. .++..++ +++|+++.+......++|.++||++++++.+ ++
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-------~~ 155 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-------WF 155 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-------Hc
Confidence 233344688999999999999987777775 6666665 4568888999999999999999999999998 44
Q ss_pred cccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchh
Q 011997 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (473)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (473)
||| ..+...++..++..+..++.||++++.+++++ .++...++++++|+|++
T Consensus 156 g~~---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 156 GEQ---------AILWILTAGVASMLLGQLLRPTIMPQGESRQQ-------------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred Chh---------HHHHHHHHHHHHHHHHHHccCCCCCccccccc-------------------cccccchHHHHHcChhH
Confidence 554 44455444333333333444543221111000 00112346788899999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHH
Q 011997 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (473)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (473)
+...+..++............+.|.. +.|.+..+.|.......++.++... ..+++.||.++++.+..+....
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~------~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQ------AAGYSASTIGYLWSLGVVAEVLIFA-FSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHH------HCCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHH
Confidence 88777766666555556666666552 2588899999999988888888777 5555667778888888777776
Q ss_pred HHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHH-HHHHHHHHhhhhhhhHHH
Q 011997 365 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~ 443 (473)
.+....+.... ..+ ...+..++.++......+....+..+. +++++++..+..+ .....|..+||.++|.++
T Consensus 281 ~~~~~~~~~~~-----~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 281 VVRWGLMGSTT-----ALP-WLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred HHHHHHHHhhh-----hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655443321 222 233344444555455566666777775 5677799999887 445677799999999999
Q ss_pred HHhhh
Q 011997 444 SWAQK 448 (473)
Q Consensus 444 ~~~g~ 448 (473)
|..|.
T Consensus 354 ~~~g~ 358 (382)
T PRK11128 354 QHLGA 358 (382)
T ss_pred HhccH
Confidence 99874
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=1.8e-27 Score=229.14 Aligned_cols=363 Identities=21% Similarity=0.194 Sum_probs=272.9
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
.+.+.+..+|.+.+++.++..+.....+.+..+..-|+.. .+++..+..+...+.++++|.++||++|||+++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 3445677889999999999999999999998888777777 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc-----cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 118 GTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 118 ~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
+.++..+..+..++ ..+.+.+++.-++.|++.+...|+ ++++.|+.|+++..+++++.+...++...+||.++|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 98877665544433 247889999999999999999998 999999999999999999999999999999999999
Q ss_pred HhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhccc
Q 011997 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (473)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (473)
.+.. ..+....+.+.++..++.+..+...+.++++.+..+ +...++ -
T Consensus 161 ~Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~---e~~~~~--------------l 207 (524)
T PF05977_consen 161 ILVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR---ERFFSA--------------L 207 (524)
T ss_pred HHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccch---hhhhhh--------------H
Confidence 9987 233334445555544444444444443222111111 111011 1
Q ss_pred CCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh
Q 011997 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (473)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~ 351 (473)
....+.+.++|.+...++..++.++........+|.+.. +.+|.++...|++.+..+++.+++++ ...++.++.
T Consensus 208 ~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~-----~~l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~ 281 (524)
T PF05977_consen 208 REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFAR-----DVLGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRL 281 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHH-----HHhCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhccc
Confidence 123445556677666666555555554555556665543 33688999999999999999999999 566677777
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHH
Q 011997 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (473)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (473)
++++++..+.+...+..+.+.+.. ..+ ...+..++.|.+.........+..++..|++.||++++++++....+
T Consensus 282 ~~~~lv~~~~~~~a~~~~~lal~~-----~~~-~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 282 SSRRLVLLASLLFALALLLLALSP-----SFW-LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred CcchhhHHHHHHHHHHHHHHhcch-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 888887777776666665554432 222 23344445556666667778888999999999999999999999999
Q ss_pred HHhhhhhhhHHHHHhhhccc
Q 011997 432 KAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 432 ~~~~~~~~g~l~~~~g~~~~ 451 (473)
..+|..+.|.+.++.|....
T Consensus 356 ~~lGsll~G~la~~~g~~~a 375 (524)
T PF05977_consen 356 MPLGSLLWGFLADHFGVRTA 375 (524)
T ss_pred HHHHHHHHHHHHHHhCHHHH
Confidence 99999999999999887543
No 71
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=4.3e-26 Score=216.78 Aligned_cols=345 Identities=14% Similarity=0.146 Sum_probs=219.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHH-HHHHHhhhhhhhhcccCCchhh-HHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGT 119 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~-~~~~ 119 (473)
....++..++..+......|.+|.+ .+++|.++++ .|++.+...+ +..++.++.|+ +||+||||.+ +.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~ 89 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCC 89 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHH
Confidence 3445666888888888888988864 6789999998 9999876655 55555555555 9999999875 4556
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchh--hhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA--LGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~--~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+..+++..+.+++++++.+++.+.+.|...+...|. .+++.|+.++++|. ...+..+...++|.+++|++++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~- 168 (393)
T PRK15011 90 LLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM- 168 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-
Confidence 666677788888999998876665555444455564 77888887776663 44578888999999999999999998
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
++| ||..+...++..++. +...+++||.+++++.+++ .. ...
T Consensus 169 ------~~g---------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~ 211 (393)
T PRK15011 169 ------GFS---------FTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG---TL-------------------EAP 211 (393)
T ss_pred ------hcC---------hHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc---cc-------------------ccc
Confidence 344 454446665555444 3444567776433221100 00 000
Q ss_pred cccccc-chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 276 KSLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 276 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
.++ +..+...............+..+.|.|+.. .+|+++.+.+.......++.+++.. ..+++.||++||
T Consensus 212 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~~~~~~~~g~~~~~~~~~~i~~~~-~~G~l~dr~g~~ 282 (393)
T PRK15011 212 ---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIIN-----ELHLPEKLAGVMMGTAAGLEIPTML-IAGYFAKRLGKR 282 (393)
T ss_pred ---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChH
Confidence 111 222222222233333333344456655432 3588888999888777777777777 556666677888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (473)
+....+.....+........ . ..+. ......+.+.......+......+|..| ++++++.++.+...++|..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~---~--~~~~-~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~ 355 (393)
T PRK15011 283 FLMRVAAVAGVCFYAGMLMA---H--SPAI-LLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWII 355 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH---h--hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHH
Confidence 87666554444333222111 1 1121 1122222222222233344556677777 46999999999999999999
Q ss_pred hhhhhhHHHHHhhh
Q 011997 435 GPAGGGALFSWAQK 448 (473)
Q Consensus 435 ~~~~~g~l~~~~g~ 448 (473)
+|.+.|.+.|+.+.
T Consensus 356 g~~l~G~i~~~~g~ 369 (393)
T PRK15011 356 AGSLAGIVAEIWNY 369 (393)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998764
No 72
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=227.53 Aligned_cols=372 Identities=12% Similarity=0.067 Sum_probs=251.3
Q ss_pred hhhhhhhHHHHHHHhcccccchhhh-hhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 57 ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.....+..+.+.++...+..+.+.. ...+++.+...++..+++++.|+++|++|||+.++.+.+.+.++.+++++++|+
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~ 142 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW 142 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3455555565555432222111000 115899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCc
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (473)
++++++|+++|+|.|..... +.+++|+.|++.||...+..+....+|..++..++....+ . .++
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-------~--------~~~ 207 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-------V--------YAG 207 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------C--------Ccc
Confidence 99999999999998887664 9999999999999999999999999999999665555443 0 035
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhH--HHhhH------------hH-HHhhhhhc-ccCCccccc
Q 011997 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALES------------AS-AEVKEEEG-REATPKKSL 278 (473)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~------------~~-~~~~~~~~-~~~~~~~~~ 278 (473)
||.++....+++++..+..+++||+|++..++.+.++... ..+.. .. +...+... +....+.++
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGEL 287 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHh
Confidence 7777788888888887778899999987554333222211 11111 00 00000111 111123444
Q ss_pred cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH
Q 011997 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (473)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (473)
+++.......+...+..+++.+..+....|... ..+..|.+... .......++..+++.. .+..+.||.|||+++.
T Consensus 288 ~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~--if~~~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 288 FSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTT--IFKSAGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRRKLLL 363 (513)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCceEEeehHH--HHHhcCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHH
Confidence 443233334444555555544433333333322 23334444332 3344444566666666 3455556679999999
Q ss_pred HHHHHHHHHHhHHHHHHHhhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHH
Q 011997 359 IAGVLTIPLLTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (473)
.+.....++.+++........ ...+..+....+....+..+..+..+.+.+|.+|.+.|+++.++...+.++.
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 999888888777665543321 1234445555555666677778888999999999999999999999999998
Q ss_pred HHhhhhhhhHHHHHhh
Q 011997 432 KAAGPAGGGALFSWAQ 447 (473)
Q Consensus 432 ~~~~~~~~g~l~~~~g 447 (473)
..+-......+.+..+
T Consensus 444 ~~~v~~~~~~~~~~~~ 459 (513)
T KOG0254|consen 444 NFLISFFFPFITEALG 459 (513)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 8877777766666654
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=2.1e-26 Score=219.71 Aligned_cols=355 Identities=12% Similarity=0.025 Sum_probs=237.2
Q ss_pred HHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCC-chhhHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASV 122 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~~~~~~ 122 (473)
.+.+..+..+.......|.++ .+.+++|.+..| .|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 355666677777777766665 555779999999 9999999999999999999999999965 77888888888
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHh----h----hhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA----C----EIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i----~----~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
.+...+..+.++++.+++.|++.|++.+...+. .+.. . |......|.+..| .+|.+++|.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 80 ALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 888888888999999999999999976665553 3332 2 2233334555544 46888899998877
Q ss_pred ccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCC
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (473)
.. ...| .++...++..++..+..+.+||+++.+++++.+ . ++..+.
T Consensus 154 ~~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~--------------~~~~~~ 199 (418)
T TIGR00889 154 DI----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKMS---I--------------KVMLGL 199 (418)
T ss_pred cc----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCccccccC---H--------------HHHhhh
Confidence 43 1112 234444444444444556778865322211100 0 000111
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCC--CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh
Q 011997 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG--LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (473)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~ 351 (473)
..++++|+|+++...+..++..........+.+.|......... .+++....+...+...+..+++.. ..+++.||+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~-~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL-TIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 23456788887776666666544333343444444432100000 123456779999998999999987 555666777
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHH-HHHHH
Q 011997 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSL 430 (473)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~ 430 (473)
++|+++..+.++..+....+.... ........+.+..++.+.......+....++.|.+|+++|++++|+.+ ....+
T Consensus 279 g~r~~l~~~~~~~~v~~~l~~~~~--~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 279 GIKKVMLLSLVAWALRFGFFAYGD--PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 999998888887777655544321 011112223334444545555556777788899999999999999997 56789
Q ss_pred HHHhhhhhhhHHHHHhhh
Q 011997 431 FKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~ 448 (473)
|..+||.+.|.++|+.+.
T Consensus 357 g~~iGp~l~G~l~~~~g~ 374 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFA 374 (418)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999999764
No 74
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.5e-27 Score=225.67 Aligned_cols=338 Identities=17% Similarity=0.199 Sum_probs=249.9
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccc--cHHHHHHHHHHHh
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 146 (473)
.+++.+..| .+++.+.++.|+.+++.+.|+++||+|-|+++..+.++.++.+++...+. +++.+++.|++||
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 357777777 99999999999999999999999999999999999999999999998864 5568899999999
Q ss_pred hhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHH
Q 011997 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 225 (473)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 225 (473)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++-+++|++.+. .+||+..| .+.+..
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~sif---------Y~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWPSIF---------YVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCchHH---------HHHHHH
Confidence 999999886 99999999999999999999999999999999999999981 26666555 677777
Q ss_pred HHHHHHHH-hhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcc--cCCccccccccchhHHHHHHHHHHHhhhhhhh
Q 011997 226 AFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR--EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 302 (473)
Q Consensus 226 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (473)
+++..+++ ++..|+|.+++.-.++ |.+..++...+++.+ .+.+++++++++.+|...+..+..+.....+.
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~------El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~ 278 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISEK------ELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLL 278 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHH------HHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 76665444 4556666664433321 222222221111111 46789999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhh---------hHHHHHHHHHHHHHHhHHHH
Q 011997 303 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPY 373 (473)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 373 (473)
.+.|.|+... +|++..+.|+..++..+...+..+. .+.+.|+..+ |..-.++.....+.++.+.+
T Consensus 279 ~y~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k~~-~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 279 TYLPTYLKEV-----LGFDVRETGFLSALPFLAMAIVKFV-AGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHhhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 9999997765 5999999999999999999999884 4445554433 22223444444455555544
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 374 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
.... ..+..+.+..+.. ...+...+..+.-..+. .++..+..+|+.+....+.+.++|.+.|.+.+
T Consensus 353 ~~~~---~~~~a~~~l~~~~-~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 353 TSDE---HRLLAVILLTIAI-GLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred cCCC---cchHHHHHHHHHH-HHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 4321 1222222222211 12222222333333332 45899999999999999999999999999995
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=1.5e-25 Score=213.90 Aligned_cols=351 Identities=15% Similarity=0.196 Sum_probs=235.2
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-----CCch-hhHHHHH
Q 011997 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (473)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~-~~~~~~~ 120 (473)
....+..+.........+|.+.++.|.+.++ +|++..+... .+..+++|+++||+ |||| .++++..
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 3445667777888889999999999999999 9999777665 59999999999999 8876 6888888
Q ss_pred HHHHHHHHhhcc---ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 121 ~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.+++....++. .+++.+++..++.+++.+...+. .+++.|++|+|+|+++.++...+..+|..+++.+++.+.+
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~- 155 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD- 155 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-
Confidence 888777777776 35777888888888877777775 9999999999999999999999999999999999998876
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
.+ ++||..+.+.++..++..+..++.||++++++++++ .. + +.....+
T Consensus 156 ------~~--------~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~---~~-~--------------~~~~~~~ 203 (402)
T PRK11902 156 ------RV--------LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRS---LG-E--------------AVVGPLR 203 (402)
T ss_pred ------cc--------cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccch---hH-H--------------HHHHHHH
Confidence 11 245555566666555555555667775443211110 00 0 0011345
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHH-HHHHHHHhhHHHHHHhhhhhH
Q 011997 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (473)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 355 (473)
+++|+|.++...+..++..........+.+.++ .++.|+++.+.+......+. +.+++.. ..+++.||+++++
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l-----~~~~G~~~~~~g~~~~~~~~~~~i~g~~-~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFL-----IRGAGFSAGEVGIVNKTLGLAATIVGAL-AGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHH-----HHhcCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHhHHH
Confidence 678889888776665555443332222333332 23368899999998866554 4667766 6667777788888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHH
Q 011997 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCA---SVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 432 (473)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 432 (473)
....+.....+....+.......+ ..+...... .+..+............+.++..|.+++ +..+....++.
T Consensus 278 ~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ 352 (402)
T PRK11902 278 SLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGR 352 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHH
Confidence 776666555444333322221111 122211111 1233334444556666677776665554 55555667777
Q ss_pred HhhhhhhhHHHHHhhhc
Q 011997 433 AAGPAGGGALFSWAQKR 449 (473)
Q Consensus 433 ~~~~~~~g~l~~~~g~~ 449 (473)
.+++.++|.+.|..|..
T Consensus 353 ~~~~~~~G~l~~~~G~~ 369 (402)
T PRK11902 353 VYVGPTSGYLVEAYGWP 369 (402)
T ss_pred HHHHHHHHHHHHHhChH
Confidence 77777999999998864
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=249.43 Aligned_cols=325 Identities=15% Similarity=0.089 Sum_probs=229.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH---HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i 159 (473)
.++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....+++++++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888999999999999999999999999998643 22222333333334589999999999999999998886 9999
Q ss_pred hhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccC
Q 011997 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (473)
.|++|+++|++++++.+.+.++|.++||++++++.+ ..+|+..++...+..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI----------------SGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999998 3344444444445555555556667766
Q ss_pred cCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCC
Q 011997 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (473)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
++.....+.+.... ++ ....++.+.+++.++...+..++..+....+..++|.|... .+|
T Consensus 198 ~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII-RS--------------TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKE-----TLG 257 (1140)
T ss_pred CCCCCCCeeccchH-HH--------------HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-----HcC
Confidence 43322111110000 00 01135567788888888887777766666666777777643 358
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHH---------------HhhhhhHHH
Q 011997 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA---------------MLSGFGLAF 384 (473)
Q Consensus 320 ~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 384 (473)
.++.+.|.+.+..+++.++++++.+++.+++ .+++.+..+.++..+....+.+.. .......+
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW- 335 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH-
Confidence 8999999999999999999999555544443 444444444333333332222210 00001222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 385 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
.+.+..++.+++.....+...++.++..|++.+|+++|+.++...++..+++.+.|.+.+..
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~ 397 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG 397 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23344445556666677778899999999999999999999999999999999999998643
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.9e-26 Score=249.10 Aligned_cols=369 Identities=16% Similarity=0.065 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHHhhhhh-hhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+.+..+++..++..+.. .......+.+..+++.+... ...+++.+++.+++.++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 34444455555554433 34444555666677654332 22789999999999999999999999999999999988
Q ss_pred HHHHHHHHHh---hccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 120 ~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
++..+..++. ..+++++.+++.|+++|++.+...++ .++++|++|+++|++++++.+.+..+|.++||.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766555544 34578999999999999999998886 9999999999999999999999999999999999999986
Q ss_pred ccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc
Q 011997 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (473)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
.... +....+ .+.++..+.......++.++..+.+||.++....+.+..+.. . .+.....+
T Consensus 165 ~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~ 225 (1146)
T PRK08633 165 SVNG-----NTPSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL--F-----------PKLLWRNL 225 (1146)
T ss_pred hhcc-----cccccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc--c-----------HHHHHHHH
Confidence 2000 000000 111222223333333344445556777654432211000000 0 00001134
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChh-hHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
+.+++++.++...+..++..........+++.|+.. .+|++.. +.+++.+..+++.+++++ +.+++.||.+++
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~~~ 299 (1146)
T PRK08633 226 KLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKE-----VLGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHIEL 299 (1146)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCceEc
Confidence 556778887776666665555545555566665543 3578888 899999999999999988 556666777777
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHh
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (473)
+.+.++.++..++..++.+.. ......+..++.+++.....+...++..+..|++.||+++|+.+++..+|..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~ 373 (1146)
T PRK08633 300 GLVPLGALGLALSLFLLPTAP------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL 373 (1146)
T ss_pred cchhHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH
Confidence 776666665555555444321 12223344444555556666777888889999999999999999999999988
Q ss_pred hhhhhhHHHH
Q 011997 435 GPAGGGALFS 444 (473)
Q Consensus 435 ~~~~~g~l~~ 444 (473)
++.+++.+..
T Consensus 374 ~~~~~~~l~~ 383 (1146)
T PRK08633 374 FLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHH
Confidence 8877766654
No 78
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.2e-25 Score=217.40 Aligned_cols=383 Identities=12% Similarity=0.065 Sum_probs=248.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHH---hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~ 116 (473)
+.++.++...+.+.++.+...+.+|.+.++ +|.+..+ .+++.+.+.++..++++++|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 446667777888888888888888877654 8999988 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccc---hhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~i~~~ 192 (473)
++.++.+++.++.+++++++.++++|.+.|++.|...+. .++++|++|+++ |++++++.+.+.++|..+||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988775 899999998764 8889999999999999999999999
Q ss_pred hccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCC----CCCCCcchhhhHHHh-----------
Q 011997 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR----HNDDDDSCDVSYDAL----------- 257 (473)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~~~~~~----------- 257 (473)
+.+ .+| |+..+...++..++..+..+..++..++ .+..++++++.....
T Consensus 164 l~~-------~~g---------~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T TIGR00924 164 IAE-------NYG---------YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF 227 (475)
T ss_pred HHH-------hcC---------hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 987 344 4444455544433333333333322111 110000000000000
Q ss_pred hHhHHH----h----------------hhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCC
Q 011997 258 ESASAE----V----------------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (473)
Q Consensus 258 ~~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (473)
...... . .+...+......+..|...+....+...++...+....+.++.+...... .+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~-~~ 306 (475)
T TIGR00924 228 FCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMH-HE 306 (475)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcc-cc
Confidence 000000 0 00000000011111122223333344444444444444445544432211 11
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHH---HHHHh-hhhhHHH--HHHHHHHHHHHhHHHHHHHhh---hhhHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYP---FLERI-LGPIMVA--RIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNC 388 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~---~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 388 (473)
.+--....+.+.+..++..++.+++..+ ++.|| .+++... .++.++..+++..+....... .....++++.
T Consensus 307 ~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~ 386 (475)
T TIGR00924 307 MLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVL 386 (475)
T ss_pred ccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHH
Confidence 1111123677888888888888776554 23332 2223333 456666665655544321110 1223444666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 389 ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
..++.+.+.....|...++..+..|++.||+++|+......+|..+++.+.+...+..
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~ 444 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ 444 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6777788888999999999999999999999999999999999999988888776543
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=2.4e-26 Score=220.78 Aligned_cols=361 Identities=12% Similarity=0.087 Sum_probs=225.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
..+.+.+..++..+..+...+.+|.+.+ ++|.+..+ .|++.+++.++..++++++|+++||+|||++++++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 4555556677777777778888886655 49999999 9999999999999999999999999999999988766
Q ss_pred HHHHHHHHhh---ccc-----cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 121 SVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 121 ~~~~~~~~~~---~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
+.+++..... .++ .....++++++.|.+.....+. ..+..+ . .++|++.++......++|..++|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHH
Confidence 6554433211 111 1111222333333332222222 233222 2 345677888888889999999999999
Q ss_pred HhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhccc
Q 011997 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (473)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (473)
.+.+ .+ |+.++...++..++..+..++.+++++++.+.+++++. ++++..
T Consensus 163 ~l~~--------~~---------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 212 (420)
T PRK09528 163 ILFN--------IN---------PQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAVS 212 (420)
T ss_pred HHHh--------cC---------chHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------cccccc
Confidence 9875 23 34444565555555444444443332221110000000 000011
Q ss_pred CCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh
Q 011997 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (473)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~ 351 (473)
.+..++.+|+|+++...+...............++.|..... .+.+.+..+.|...+...+...++.+ ..+++.||+
T Consensus 213 ~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~ 289 (420)
T PRK09528 213 LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINRI 289 (420)
T ss_pred HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 122345678888766555444433333334445565544321 12356677889999988888888887 566677778
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHH-HHHHHHH
Q 011997 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMSL 430 (473)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~ 430 (473)
++++....+..+..+...++.+.. ..+. +.....+.+.......+....+..+..|++.+++..+. .++...+
T Consensus 290 g~~~~~~~~~~l~~~~~~l~~~~~-----~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l 363 (420)
T PRK09528 290 GAKNALLLAGTIMAVRIIGSGFAT-----GPLE-VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL 363 (420)
T ss_pred CcchhhHHHHHHHHHHHHHHHhcc-----cHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH
Confidence 998888777776666655554421 2222 22333333344444445566777888899999988766 6788899
Q ss_pred HHHhhhhhhhHHHHHhhhc
Q 011997 431 FKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~~ 449 (473)
|.+++|.+.|++.|..|..
T Consensus 364 g~~ig~~~~G~l~~~~G~~ 382 (420)
T PRK09528 364 GAVFLSTLAGNLYDSIGFQ 382 (420)
T ss_pred HHHHHHHHHHHHHHhhCch
Confidence 9999999999999988743
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=5e-26 Score=216.93 Aligned_cols=360 Identities=13% Similarity=0.119 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
.++.+....++.........|.+|.+. +++|.+..+ .|++.+++.++..+++++.|+++||+|||+.++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 355566667777788888889888765 568999999 9999999999999999999999999999999998776
Q ss_pred HHHHHHHHh---hccc-----cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 121 SVVIFNTLF---GLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 121 ~~~~~~~~~---~~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
..++..... .+.+ ....+++.|++.|++.+...+. ..+..|..+ ++++.++......++|.+++|.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHh
Confidence 665544322 1221 2334566788888887776664 666666433 3455677778888999999999999
Q ss_pred HhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh-cccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcc
Q 011997 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (473)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (473)
.+.+ .+|+.++...++..++..+..+. .||++++++. ++..+ ++++++
T Consensus 155 ~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~ 203 (396)
T TIGR00882 155 ILFS-----------------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV-ANALG-------------ANASAF 203 (396)
T ss_pred hhhc-----------------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-hcccc-------------cccCCC
Confidence 8864 24455556666655555444443 3333221110 00000 000111
Q ss_pred cCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
+.++.++++|+|+++...+..+...........+.+.|...... +.+.+....|...+...+...++.. ..+++.||
T Consensus 204 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~~-~~g~l~~r 280 (396)
T TIGR00882 204 SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIMF-CAPLIINR 280 (396)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 12245678889988766655544444444444456666543321 2255667788888888888888877 55566777
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHH-HHHHHH
Q 011997 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMS 429 (473)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~ 429 (473)
.++|+....+..+..+...+.... ...+. +....++.+............+..+..|++.++++.+. .+....
T Consensus 281 ~g~~~~l~~~~~l~~l~~~~~~~~-----~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~ 354 (396)
T TIGR00882 281 IGAKNALLIAGTIMSVRIIGSSFA-----TTALE-VVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ 354 (396)
T ss_pred hccchhHHHHHHHHHHHHHHHHhc-----CChHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH
Confidence 799888887777666655543331 12222 22333333333333333444556667788888887776 678899
Q ss_pred HHHHhhhhhhhHHHHHhhhc
Q 011997 430 LFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 430 ~g~~~~~~~~g~l~~~~g~~ 449 (473)
+|+.++|.+.|++.|..|..
T Consensus 355 lg~~~~~~l~G~l~~~~G~~ 374 (396)
T TIGR00882 355 LAMIFLSTLAGNMYDSIGFQ 374 (396)
T ss_pred HHHHHHHHhHHHHHHhcccH
Confidence 99999999999999988743
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=1.5e-25 Score=210.78 Aligned_cols=332 Identities=11% Similarity=0.162 Sum_probs=228.8
Q ss_pred hhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-----CCchhh-HHHHHHHHHHHHHhh
Q 011997 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVI-IMGTASVVIFNTLFG 130 (473)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~~-~~~~~~~~~~~~~~~ 130 (473)
.....+..|.+.+|+|.+.++ .|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++.....+
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~ 75 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS 75 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 355678889999999999999 9998755 555555 99999999998 899974 567777777776777
Q ss_pred cc---ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc
Q 011997 131 LS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 131 ~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw 206 (473)
+. .+.+.+....++.+++.+...+. .+++.|++|+|+|+++.++...+..+|.++++.+++.+.+ .+|.
T Consensus 76 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g~ 148 (356)
T TIGR00901 76 FLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEFA 148 (356)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hccc
Confidence 76 45666777777888877777775 9999999999999999999999999999999999999887 3332
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHhh-cccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccch--
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP-- 283 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (473)
... .+++||.++.+.++..++..+..++ .||++++.+. ++ +.. ++ .....++++++|.
T Consensus 149 ~~~-~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~~--~~~-~~--------------~~~~~~~~~~~~~~~ 209 (356)
T TIGR00901 149 NTG-LITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV-PK--PLT-QA--------------VLKPIREFFQRKNMI 209 (356)
T ss_pred ccc-cccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc-ch--hHH-HH--------------HHHHHHHHHHhcCch
Confidence 221 2556888888877766665554443 4664321111 00 000 00 0112344556554
Q ss_pred -hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHH-HHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 284 -LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
++...+..++..........+.+.|... .|+++.+.+......+. ..+++.+ .++++.||+++++.+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~~-~~g~l~~r~g~~~~l~~~~ 282 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGGL-IGGIIMQPLNILYALLLFG 282 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHHH-HHHHHHhhhhHHHHHHHHH
Confidence 5555555555555555556667766532 58899999988877664 5556665 6777778889888877777
Q ss_pred HHHHHHHhHHHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHH
Q 011997 362 VLTIPLLTSYPYIAMLSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (473)
++..+...++.+...... ...........++.++......+...++.+|.+|+++||+.+|+.+...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 283 IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 766665554443321110 01122333444455566677888899999999999999999999887654
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=6.6e-27 Score=232.23 Aligned_cols=387 Identities=16% Similarity=0.136 Sum_probs=268.1
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
...+..+...+......+.++.+.++|+++..+ .|++.+.+.++++++.++.|+++||+||||.+.++.+++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 344456666667788888999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccc---------------------------------------------------cHHHHHHHHHHHhhhcchhH
Q 011997 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (473)
Q Consensus 125 ~~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~ 153 (473)
+++++++.+ .+..++++|+++|+|.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999987753 24577899999999999988
Q ss_pred hH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCC---------cccccccccCCcchhHHHHHH
Q 011997 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN---------LFSSESLFGKFPYFLPCLCIS 223 (473)
Q Consensus 154 ~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~---------~~gw~~~~~~~~~~~~~~~~~ 223 (473)
+. .+++.|++|+++|++.+++.+....+|..+|+++++++.+...+|+. ...||| ...||..+++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW---iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW---IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH---HHHHHHHHHHHH
Confidence 86 99999999999999999999999999999999999999873222210 011121 224788888887
Q ss_pred HHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhH-hH---HHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhh
Q 011997 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALES-AS---AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (473)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (473)
++.++..+.++++|++.+....+.+.+....+..+. .. .+..+..++.....+++++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 777776666667776543221110000000000000 00 00000111122346678999999999988888888888
Q ss_pred hhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHH-HHHHHHHhhHHHHHHhhh--hhHHHHHHHHHHHHHHhHHHH---
Q 011997 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPY--- 373 (473)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 373 (473)
.+..+.|.|+... +|+++.+++.+.....+ +.+++.+ +++++.||.+ .++.+..+.++..+..++...
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~~-l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGYL-IGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFL 421 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHHh-hhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 8888899887643 68999999999887776 4456666 5666666665 456666666555555433210
Q ss_pred H-----------------------HH---------hh-------------------------------------------
Q 011997 374 I-----------------------AM---------LS------------------------------------------- 378 (473)
Q Consensus 374 ~-----------------------~~---------~~------------------------------------------- 378 (473)
. .. ..
T Consensus 422 ~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~ 501 (633)
T TIGR00805 422 IGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPG 501 (633)
T ss_pred ecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCC
Confidence 0 00 00
Q ss_pred ------h----h--hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH-HHHHHHHhhhhhhhHHHHH
Q 011997 379 ------G----F--GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 379 ------~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~ 445 (473)
+ . .....+++..++..+.............-+.+|+++|..+.|+... .+-+|..-+|.+.|.+.|.
T Consensus 502 ~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 502 NSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred CCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 0 0 0012222222222222233333445566678999999999999975 5667889999999999987
Q ss_pred h
Q 011997 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 582 s 582 (633)
T TIGR00805 582 S 582 (633)
T ss_pred h
Confidence 5
No 83
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=3.7e-28 Score=213.65 Aligned_cols=324 Identities=18% Similarity=0.151 Sum_probs=239.0
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhh
Q 011997 82 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (473)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 160 (473)
..+|++.+.+.+.+.+.+++.|.+.||+|+|-.+++|+.++...++++++.+++++++++|.+||+|.++...+ .++++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlA 185 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLA 185 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHH
Confidence 33999999999999999999999999999999999999999999999999999999999999999999998887 99999
Q ss_pred hhcccc-chhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccC
Q 011997 161 EIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 161 ~~~~~~-~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (473)
|.+|++ +|++++|+...+.++|..+||.+||.+.+ ..+++.||++.++..++-..+.+++-|+
T Consensus 186 d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 999976 57999999999999999999999999999 5667788888888887776666655443
Q ss_pred cCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCC
Q 011997 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (473)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
.+..++.. .+....++++++|.++.........+.........+++|.... +.
T Consensus 250 ~~~~~~~~----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~-----m~ 302 (464)
T KOG3764|consen 250 TEMDPDST----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET-----MF 302 (464)
T ss_pred cccCcccc----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh-----cc
Confidence 22221111 1223567889999887766555554444444455556654332 34
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh--hhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 011997 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (473)
Q Consensus 320 ~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (473)
-+.-+.|..+....+...++..+.+ .+.+|++ |......+.+.........++..... ..|.......+.++...
T Consensus 303 ~p~w~~G~~fLp~~~~y~ig~~lfg-~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~--~L~vp~~~l~~~i~~~d 379 (464)
T KOG3764|consen 303 TPGWEVGLAFLPASLSYAIGTNLFG-KLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA--QLWVPNFGLGFGIGLAD 379 (464)
T ss_pred CCCcceeeeecccccchhccCchHH-HHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH--HHhhhhHHHHHHHHHHH
Confidence 3344889999999999999998555 4555567 44444555555555555555554332 22332333333333333
Q ss_pred HHHHHHHHHhhcccCCcc---hhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcccc
Q 011997 398 VSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA 452 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 452 (473)
....|.....+.. ...+ .-|.+.++......+|.++||.++|.+++..|..+..
T Consensus 380 asl~P~l~~lvd~-rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~ 436 (464)
T KOG3764|consen 380 ASLIPTLGYLVDP-RHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLM 436 (464)
T ss_pred HHHhhhhHHhcch-hhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHH
Confidence 4444444433332 2223 6789999999999999999999999999999987644
No 84
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=3.8e-26 Score=198.47 Aligned_cols=370 Identities=15% Similarity=0.089 Sum_probs=255.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+............+.+......-+.|...+.+|.+..+ ..++......+..+++..+|..+|++|||+.+....
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 33344455556666666666677778888899998888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
....+...+.+.++|+..+.+.|.+.|+|.|......++-.|..|..+|...+-.. ..+.+|.++...++..+..
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~---- 225 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS---- 225 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999999888333488888999999999887777 8999999999999999888
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhH--HH---------------------
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DA--------------------- 256 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~--------------------- 256 (473)
++|||+.+ .....+..+.....+++||+|+....+.++.++.. ++
T Consensus 226 ---~~gwr~~l---------~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~ 293 (528)
T KOG0253|consen 226 ---NFGWRYLL---------FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDR 293 (528)
T ss_pred ---hhhHHHHH---------HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhh
Confidence 56666544 55556666667778899999988665554444321 00
Q ss_pred hhHhHHHhhhh----hcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCC--------------
Q 011997 257 LESASAEVKEE----EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL-------------- 318 (473)
Q Consensus 257 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 318 (473)
.++++.+.++. .++...+..+++..+-.+..++....++...+.+.+..-.........+..
T Consensus 294 ~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~ 373 (528)
T KOG0253|consen 294 QEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETR 373 (528)
T ss_pred hhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhh
Confidence 11111111111 112223344455444344444444444444333322211110000000100
Q ss_pred ---CCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 319 ---NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 319 ---~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
..+...--.-..+..+..+.|.+ +..++.+|+|||+.+...+++..++.+++....... . ..+..+..-+
T Consensus 374 ~~c~~s~~~dYrdllitslaefPGlL-It~~iverlGRKkTMal~l~~f~iflfll~~c~~rn--~----~tvllf~ara 446 (528)
T KOG0253|consen 374 ANCPLSVAKDYRDLLITSLAEFPGLL-ITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN--A----YTVLLFTARA 446 (528)
T ss_pred hcCCccchhHHHHHHHHHHhhCCchh-HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc--h----hHHHHHHHHH
Confidence 11122222334455677888877 556666679999999999988888776654432111 1 1222233334
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
+..+.+.+.+.+..|.+|+..|+++.|.+..+..+|+++.|.++
T Consensus 447 fisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 447 FISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 55677888999999999999999999999999999999999998
No 85
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.1e-25 Score=196.86 Aligned_cols=369 Identities=16% Similarity=0.161 Sum_probs=279.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+..+..+....++.++......+.+|.+++.|+++..| .+++...++.++.+.+++.|++.+|+|+|+.++.++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 34455666777788888889999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh---ccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++++++.+.. ...++..++++-++.|.|.+...++ +.++....|+++..+.+++.+...++|.+++|++++.+..
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999884 5678999999999999999998885 9999999999999999999999999999999999999986
Q ss_pred ccc----cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh--cccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhc
Q 011997 196 PAE----KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (473)
Q Consensus 196 ~~~----~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (473)
... +-+....|+... -..++.++...+...++..+.... .|+.++..+++.+
T Consensus 166 s~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~--------------------- 223 (422)
T COG0738 166 SGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA--------------------- 223 (422)
T ss_pred hhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc---------------------
Confidence 210 000111222222 223555555555544444333333 2332221111110
Q ss_pred ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 011997 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (473)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 349 (473)
.......+++++|+++...+..+++.........+++.|.... .|.+..+.+...+....+.++|+++ +-++.+
T Consensus 224 ~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGRFi-g~~lm~ 297 (422)
T COG0738 224 SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGRFI-GSALMS 297 (422)
T ss_pred cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 0111457789999999999999999999999999999887654 4889999999999999999999984 444555
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHH
Q 011997 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (473)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (473)
|+...+.+........+.++...+... ...+....+.+.+....+|..++...+..| ++.. ..|....+..
T Consensus 298 ~~~~~k~Laf~a~~~ill~~~~~l~~g-------~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~mai 368 (422)
T COG0738 298 RIKPEKYLAFYALIAILLLLAVALIGG-------VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAI 368 (422)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHhcC-------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeehe
Confidence 778888777776666666555555431 122333345556778899999999999888 4443 3444456788
Q ss_pred HHHHhhhhhhhHHHHHhhhccc
Q 011997 430 LFKAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 430 ~g~~~~~~~~g~l~~~~g~~~~ 451 (473)
.|+++-|.+.|++.|..|....
T Consensus 369 vGGAiiP~l~G~i~d~~g~~~~ 390 (422)
T COG0738 369 VGGAIIPPLQGVIADMFGIQLT 390 (422)
T ss_pred ecchHHHHHHHHHHHhhhhHHH
Confidence 9999999999999999987654
No 86
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=2.9e-24 Score=205.84 Aligned_cols=365 Identities=15% Similarity=0.134 Sum_probs=238.1
Q ss_pred HhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc
Q 011997 52 CTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (473)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (473)
...+........++.+.+|+|-++. ..|+.+...++.+++.++.|+++|.||||++++.+.++..++.++++.
T Consensus 55 ~~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 55 AAYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 3444555556777899999988754 789999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccc
Q 011997 132 SVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (473)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~ 211 (473)
++|...++++..+.|+|.|........++|..|.|.|+...++...........+|.++..+.. .-+|||.|
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~- 199 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIF- 199 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHH-
Confidence 9999999999999999988877667779999999999888877766665666677777776665 44666655
Q ss_pred CCcchhHHHHHHHHHHHHHH--HHhhcccCcCCCCCCCcchhhhHHHhhHhH-------------------------HHh
Q 011997 212 KFPYFLPCLCISLFAFGVTI--AAFWLPETLHRHNDDDDSCDVSYDALESAS-------------------------AEV 264 (473)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ 264 (473)
.+..+...+.++ ..+..|.+.+..+.++...+....+++... ...
T Consensus 200 --------~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa 271 (599)
T PF06609_consen 200 --------YIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSA 271 (599)
T ss_pred --------HHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 333333323222 223333332211111111111112222100 000
Q ss_pred ------------------hhh--hcccCCccccccccc-hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChh
Q 011997 265 ------------------KEE--EGREATPKKSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (473)
Q Consensus 265 ------------------~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (473)
-|. ..+++..+.+++|++ .+...+++.++....+++...++|......+..+ ..+..
T Consensus 272 ~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d--~~~~~ 349 (599)
T PF06609_consen 272 HVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSD--PISIT 349 (599)
T ss_pred cchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC--Ccccc
Confidence 011 123556677889885 4555556666666666666667776654432111 11123
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHH-HHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011997 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA-RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (473)
Q Consensus 324 ~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+.++.....+.+..++..+.+. +.++.+|.|.. ..+.++..+++.++..... ++...++ ...++.+++.+....
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~-l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~-~n~~~~i---~~~~l~g~giG~~~~ 424 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGL-LFSKIRHIKWQLIFGSVLMTAFCGAMAAVRP-DNKNAAI---AFLVLAGFGIGGILV 424 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHH-HHHHccchhHHHHHHHHHHHHHHHHHHHccC-CCcchHH---HHHHHHHHhHHHHHH
Confidence 5677777778887777774444 44444554444 4555555544444443322 2222222 223333444455555
Q ss_pred HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 403 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 403 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
......+-.+|+++.|++.|+..+.+.+|+.+|..+...++.+-
T Consensus 425 ~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~ 468 (599)
T PF06609_consen 425 PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNK 468 (599)
T ss_pred HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 56667777889999999999999999999999999998887543
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=4.5e-24 Score=203.03 Aligned_cols=357 Identities=13% Similarity=0.032 Sum_probs=233.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHH--HHHHHHHHHHHhhhhhh-hhcccCCchhhHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~G~-l~dr~Grr~~~~~~~ 119 (473)
+..+...++..++..+...|.+|.+.+|.|.+.++ .|++ .+...+...+.+|+++. ..||+||||..++..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 44566677888888999999999999999999999 9997 46678888888888854 799999999976665
Q ss_pred HHH-HHHHHHhh---cccc-HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 120 ~~~-~~~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
.+. .......+ ...+ ...++..-++.++..+...+. .++..|..++++++...+....+..+|..+|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 21222222 2222 333344444555555666664 77888888888888888888888899999999988888
Q ss_pred ccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCC
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (473)
.+ +.+|+.++...++..++..+..++++|++++++++++ + ...
T Consensus 157 ~~----------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~ 199 (390)
T TIGR02718 157 FG----------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPL--A-------------------RRA 199 (390)
T ss_pred HH----------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccch--h-------------------hHH
Confidence 88 4455555577766665555444555443221111000 0 011
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhh
Q 011997 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (473)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~ 353 (473)
+.++.+|+|.++......++..........+.+.|+. +.|++++++|......+....+.+.+..+++.||+++
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~------~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLV------DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHH------hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3456788888877777666666555555555555443 2489999999998887765544433367778888899
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc-chhhHHHHHHHHHHHHHH
Q 011997 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ-DQRGAANGIAMTGMSLFK 432 (473)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 432 (473)
++.+..+..+............................+.++......+.......+..++ +.+++.+++.+...++|.
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 274 WRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 8888776655433222221111100001111112222222233344445555555555655 899999999999999999
Q ss_pred HhhhhhhhHHHHHhhh
Q 011997 433 AAGPAGGGALFSWAQK 448 (473)
Q Consensus 433 ~~~~~~~g~l~~~~g~ 448 (473)
.++|.+.|.++|+.|.
T Consensus 354 ~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 354 LIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999998874
No 88
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.3e-25 Score=210.09 Aligned_cols=281 Identities=17% Similarity=0.147 Sum_probs=214.2
Q ss_pred HHHHHHhhhhhhhh-hhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHH
Q 011997 47 WIIVLCTALPISSL-FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (473)
Q Consensus 47 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (473)
+...+....+...+ .+.+..+.+|.+....+ .+.+.+++.++++++.+++|.+.||++-.+.+....+++++.
T Consensus 51 ~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 51 CYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHhcchhcchhHHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 33444444443322 22333345788888888 999999999999999999999999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Q 011997 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (473)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 204 (473)
.++....+|++.+++.|++.|+.++...|. ..+++.|+.+++|++.++++....++|+++|.+++..+.+ ..+.....
T Consensus 125 ~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~~~ 203 (495)
T KOG2533|consen 125 GFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGGLA 203 (495)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCCcC
Confidence 988888999999999999999999999886 9999999999999999999999999999999999998754 22222256
Q ss_pred cccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhH-HHhhHhHHHhhhhhcccCCccccccccc
Q 011997 205 SSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY-DALESASAEVKEEEGREATPKKSLLKNW 282 (473)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (473)
|||+.| ++.+++.++. ++..+++|+.|.+..-.+++++... ++.++......+ ++.+...+++.+++|
T Consensus 204 gW~~~F---------iI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~dp 273 (495)
T KOG2533|consen 204 GWRWLF---------IIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIE-NKFKWKGFKEALKDP 273 (495)
T ss_pred Cceeeh---------hHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcc-cccCHHHHHHHHhch
Confidence 666666 6655555544 5667789999886533332222111 111111111111 113455677899999
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
.+|...+..++......++..+.|+++.. +.|++..+++.+..+..++++++.+ +.+.+.||
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~-----~~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr 335 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKS-----NGGYSELQANLLSTPYDVGGIVGLI-LAGYLSDR 335 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHc-----CCCcChHHhccccchHHhhhHHHHH-HHHHHHHH
Confidence 99999999999999999999999988765 3578999999999999999999988 55556666
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=4.6e-24 Score=206.39 Aligned_cols=374 Identities=14% Similarity=0.060 Sum_probs=235.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~ 117 (473)
++.++.++...+...+..+...+.++ ++.+++|.+.++ .+++.+.+.....+..+++|+++|| +||||++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 35566667777777777777766665 456789999988 8999999998888889999999999 999999999
Q ss_pred HHHHHHHHHHHhhccccHHH-HHHHHHHHhhhcchhHhH-HHHhhhhcccc--chhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 118 GTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
+.+++.++.++++++++... ++++|.++|+|.|...|. .++++|.+|++ +|++++++++.+.++|..+||.+++++
T Consensus 87 g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876554 558999999999998775 89999999877 457899999999999999999999999
Q ss_pred ccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCC----CCC-cchhhhH------------HH
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN----DDD-DSCDVSY------------DA 256 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~~-~~~~~~~------------~~ 256 (473)
.+ ++|||+.| .+..+..+..++.+...++..++.+ +++ |...... ..
T Consensus 167 ~~-------~~gw~~~F---------~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~ 230 (489)
T PRK10207 167 AD-------KFGYSVTY---------NLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAW 230 (489)
T ss_pred HH-------hhChHHHH---------HHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHH
Confidence 98 55555544 4443322223333333332221111 110 1001000 00
Q ss_pred hhHhHHH----------------hhhhhcccCCccccccccchhHHHHHH--HHHHHhhhhhhhHHHHHhhcCccccCCC
Q 011997 257 LESASAE----------------VKEEEGREATPKKSLLKNWPLMSSIIV--YCVFSLHDMAYSEIFSLWANSPKKLGGL 318 (473)
Q Consensus 257 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (473)
..+.... ..++.+ ..+.+|+|.+....+. ..+....+......++.+.+........
T Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~f~~~~~~-----~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~ 305 (489)
T PRK10207 231 LMHNVEVANLVLIVLSIVVTIIFFREAFK-----LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL 305 (489)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc
Confidence 0000000 000011 1145566654433322 2222233333334455555422211212
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhH-------HHHHHHHHHHHHHhHHHH----HHHhhhhhHHHHHH
Q 011997 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-------VARIAGVLTIPLLTSYPY----IAMLSGFGLAFLLN 387 (473)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 387 (473)
|+.. ....+.+...+..++..++.+ ++.+|.++|+ .+..+.++..+++..+.. ..........+++.
T Consensus 306 G~~i-~~~~~~~~n~~~iii~~pl~~-~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i 383 (489)
T PRK10207 306 GFSI-NPVSFQALNPFWVVVASPILA-GIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIV 383 (489)
T ss_pred ceEE-CHHHHHhHhHHHHHHHHHHHH-HHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHH
Confidence 3321 123333444455556666444 4555556554 345565665555433221 11111112223344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 388 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
...++.+.+.....+.......+..|++.+|.++|+.+...++|+.++..+.+..
T Consensus 384 ~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 384 LVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666677888888899899999999999999999999999999999998877655
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.9e-24 Score=207.16 Aligned_cols=396 Identities=16% Similarity=0.142 Sum_probs=276.1
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhH
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (473)
.+.|...+...+......-....+....+.+.++++.+.++ .+|+.++......+..|+.+.+.||+|.|.+.+
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i 115 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMI 115 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHH
Confidence 34444444444444444444455557788999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHHH-HHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 117 MGTASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
.|.++..++.++.++++++|++++.. ++.|+|.|+... +...+..+|+ ++|+.+.|+...+.++|.++-|.+...+.
T Consensus 116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 99999999999999999999988776 778999888654 5777776665 78999999999999999999999999999
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhccc-CcCCCCC----------------------CCcchh
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHND----------------------DDDSCD 251 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~----------------------~~~~~~ 251 (473)
+ .+|||+.. .....+.+-..+.....++ +++..+. ...+.+
T Consensus 195 ~-------~~G~r~~~---------l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (509)
T KOG2504|consen 195 S-------KYGWRGAL---------LIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDS 258 (509)
T ss_pred H-------HhCcHHHH---------HHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCC
Confidence 8 55555443 4444444333333333322 2221100 000000
Q ss_pred hhHH---HhhHhHHHhhhhhc--ccCCc----cccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCCh
Q 011997 252 VSYD---ALESASAEVKEEEG--REATP----KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (473)
Q Consensus 252 ~~~~---~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (473)
...+ .-....++.+++.. ..+.. ..+++|++.++...+...+...........++.+.. ..+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~------~~g~~~ 332 (509)
T KOG2504|consen 259 GLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK------SLGLSS 332 (509)
T ss_pred CCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCCh
Confidence 0000 00000000000000 11111 257889999888888877776666666556655543 468999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHhhh--hhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 323 QMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSI 400 (473)
Q Consensus 323 ~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (473)
.+++.+.++.++..+++++ ..+++.|+.. ++.+..++.+...+.....++.. ....+....++.++..+..
T Consensus 333 ~~aa~l~Siigi~~i~gRi-~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~------~~~~l~~~~~~fG~~~g~~ 405 (509)
T KOG2504|consen 333 NDAAFLLSIIGVSDIIGRI-ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT------TYVGLIVFSILFGFCVGSF 405 (509)
T ss_pred hhhHHHHHHHHHhhhhhhh-hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 5555555544 34444555555555554444332 2234455555566666666
Q ss_pred HHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccccccccCCchhhhhhhhh
Q 011997 401 ITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGMMPKKTLIISL 468 (473)
Q Consensus 401 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (473)
.........+.++.++-..+.|+...+..++..+||.+.|.+.|..+.+...+++.+...+....+..
T Consensus 406 ~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~ 473 (509)
T KOG2504|consen 406 SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLL 473 (509)
T ss_pred HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHH
Confidence 66677788999999999999999999999999999999999999999888877777776665554443
No 91
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.2e-27 Score=214.26 Aligned_cols=393 Identities=14% Similarity=0.076 Sum_probs=245.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHh-cccccc-hhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKRE-EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
.+.-.+.+.+..+..+++.+.|.+...+ +.++.. +..+...+.+..+..+|..+|++++|+++||+|||+++...+++
T Consensus 44 ~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liI 123 (538)
T KOG0252|consen 44 IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELII 123 (538)
T ss_pred HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHH
Confidence 3455677888889999999888776554 333211 11223378899999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-------cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 122 VVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 122 ~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
+.+++++++++. -.+++...|++.|+|.|.-.|. .+..+|...++.||...+..-...+.|...|.+++-.+
T Consensus 124 mIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 124 MIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred HHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 999999887742 2578889999999999999997 78889999999999999988777777777777766665
Q ss_pred ccccccCCCccccc---ccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHH----hhHh--HHHh
Q 011997 194 AQPAEKYPNLFSSE---SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDA----LESA--SAEV 264 (473)
Q Consensus 194 ~~~~~~~~~~~gw~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----~~~~--~~~~ 264 (473)
...... .++-+ .-- +.-||+.+.+..++++..+...+.+||+++......++.+...++ +... .++.
T Consensus 204 ~~~fe~---~~~~~~~~~~l-d~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~ 279 (538)
T KOG0252|consen 204 SAIFEK---IFNGPSTYPHL-DGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAEST 279 (538)
T ss_pred HHHHhc---cCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhc
Confidence 532211 11111 111 445899999999999988888889999987652111110000000 0000 0000
Q ss_pred hhhhcccCCc----cccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHH--------HHHHH
Q 011997 265 KEEEGREATP----KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE--------VLAIT 332 (473)
Q Consensus 265 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--------~~~~~ 332 (473)
.+...+.+.. +...+..+....+......++.....+. +.-+.+....+..|+.+..... ...+.
T Consensus 280 ~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy---~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ii 356 (538)
T KOG0252|consen 280 AESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFY---GQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLII 356 (538)
T ss_pred cccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhh---ccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHH
Confidence 0011111111 2222222333333333333333332221 1111111122333444333222 22222
Q ss_pred HHHHHH-HHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011997 333 GFSLLV-FQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 411 (473)
Q Consensus 333 ~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..+..+ +.. +...+.|++||++....++.+..+..+.+........ ......+...+...+...+-......+.+|.
T Consensus 357 a~~~~vPGyw-~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~-~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~ 434 (538)
T KOG0252|consen 357 AVCSTVPGYW-FTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE-NTIGFVVLYSLTFFFGNFGPNATTFIVPAEI 434 (538)
T ss_pred HHHccCCcee-EEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc-ccCceeehHHHHHHHHhcCCCceeEEeehhh
Confidence 222222 333 3334456679999999999888888776655333111 1111122222333334445555677788999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 412 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 412 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
+|.+.|++..|+....+-.|+.++.....++.++
T Consensus 435 FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 435 FPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred chHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 9999999999999999999999999999999983
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=7.7e-24 Score=204.98 Aligned_cols=350 Identities=15% Similarity=0.106 Sum_probs=235.1
Q ss_pred hhhhhhhhhH-HHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc----cCCch-hhHHHHHHHHHHHHH
Q 011997 55 LPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTL 128 (473)
Q Consensus 55 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~-~~~~~~~~~~~~~~~ 128 (473)
.......+.+ +.+.+++|+++.+ +|++.++..+..++..|+.|+++|| +|||| .++.+....+++.++
T Consensus 13 ~~~~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 13 FIFAIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 3334444444 4566789999999 9999999999999999999999997 78755 566788888888877
Q ss_pred hhcccc------HHHHHHHHHHHhhhcchhHh-HHHHhhhhc-cccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 011997 129 FGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (473)
Q Consensus 129 ~~~~~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 200 (473)
+...++ ...+++.+++.+++.+...+ ..++..|.. ++++|++..++.+....+|..+++.+.+.+....++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~ 166 (437)
T TIGR00792 87 LFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG 166 (437)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 776553 45667778888888776554 478888887 5789999999999999999888877776665411100
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccc
Q 011997 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (473)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (473)
.. ..+|+..+.+.+++.++.. +..+..||++++.+.+++++ .+.....++++
T Consensus 167 ~~---------~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~------------------~~~~~~~~~l~ 219 (437)
T TIGR00792 167 DD---------KFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKK------------------LSLKQIFKALF 219 (437)
T ss_pred cc---------cccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccC------------------CCHHHHHHHHh
Confidence 00 3456666666666555543 34455676542211110000 00011345678
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHH
Q 011997 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (473)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (473)
++|+++...+..++..........+.+.|.. ...+ ++.+.+.......++.+++.+ ...++.||+++|+....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 220 KNDQLLILCLAYLFYNLAFNIKNGVQVYYFT-----YVLG-DPELFSYMGSIAIVAGLIGVL-LFPRLVKKFGRKILFAG 292 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcchhheeEe-----eecC-ChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHH
Confidence 8998888777666655554444333333322 1123 455667777777888888877 55667778899998888
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------cchhhHHHHHHHHHHHHHH
Q 011997 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFK 432 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~ 432 (473)
+..+..++...+.+.. ...+ ...+..++.+++.....+..+++.+|..| ++.+|++.|+.+....+|.
T Consensus 293 ~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 293 GILLMVLGYLIFFFAG----SNLP-LILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred HHHHHHHHHHHHHHcc----hhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 8777666655544321 1112 22333344445555666777888887765 5678999999999999999
Q ss_pred HhhhhhhhHHHHHhhhc
Q 011997 433 AAGPAGGGALFSWAQKR 449 (473)
Q Consensus 433 ~~~~~~~g~l~~~~g~~ 449 (473)
.+++.+.|.+.+..|..
T Consensus 368 ~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 368 ALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999999987753
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1e-22 Score=178.20 Aligned_cols=335 Identities=18% Similarity=0.124 Sum_probs=259.6
Q ss_pred hhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
......|.++.+.+|+|.+.+. .|+++++..+...+.+++..+++.|+|.++.+..++++..++.++-... +.
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cH
Confidence 4567789999999999999999 9999999999999999999999999999999999999999999998877 78
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc-cccccccCC
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF-SSESLFGKF 213 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~-gw~~~~~~~ 213 (473)
+.++.+-.+.|.|.+...+. ++.+.+.+|+ +-+..++++....++|..+++.+...+.+ +. |||.
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~-------~~~gW~~----- 166 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQ-------HSGGWRG----- 166 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHH-------hhccHHH-----
Confidence 88899999999999998886 9999999984 57899999999999999999999999987 32 4554
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHH
Q 011997 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (473)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (473)
....-++++++.++. ++|...++...+ .+....+..+++|+|.-|...+.+.+
T Consensus 167 ----aL~~WAl~allAl~~--WlPq~~r~~~~~---------------------~~~~~~~~~~vw~~~~aW~vtLfmGl 219 (395)
T COG2807 167 ----ALGFWALLALLALLI--WLPQALREQAAS---------------------IATKLVSVRKVWRSPLAWQVTLFMGL 219 (395)
T ss_pred ----HHHHHHHHHHHHHHH--Hhhhcccccccc---------------------cccccccccccccCchhHHHHHHHHh
Confidence 334445555554444 344432211110 01112234568999999999999999
Q ss_pred HHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHH-hhhhhHHHHHHHHHHHHHHhHHH
Q 011997 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER-ILGPIMVARIAGVLTIPLLTSYP 372 (473)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 372 (473)
....+++...|+|.++.+ .|+|+.+.|.+.+...+..++.++ ..+.+.+ +.++|+.......+..++...+.
T Consensus 220 qS~~~Y~~~~WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 220 QSLLYYIVIGWLPAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred hHHHHHHHHHHHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 999888988999987654 399999999999999999999998 4555554 55667776666666666666665
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccc
Q 011997 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQN-RAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 451 (473)
+.+. ...+.+ .++.+.+.++.++....... +.-+++..++-.|+.+.++++-.+.||.+.|++.|.+|+...
T Consensus 293 ~~P~---~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 293 LAPG---QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred Hhhh---hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 4321 112221 23444555566666544444 455778888999999999999999999999999999998654
No 94
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=3.1e-30 Score=250.47 Aligned_cols=385 Identities=17% Similarity=0.203 Sum_probs=250.0
Q ss_pred HHHHHhhhhhhhhhhhHHHHH--HHhcccccchh---hhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 48 IIVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
++.+..+++........+... .++..+..+.+ ...+.++..+...+|..+|++++|.++||+|||+.++.+.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344667777766666555443 23333332211 2234789999999999999999999999999999999999999
Q ss_pred HHHHHHhhccc---cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 123 VIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 123 ~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.++.++.++++ +++.+.++|+++|++.|...+. ..++.|..|+++|++..++.+....+|..++..++..+...
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-- 164 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-- 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 99999999999 9999999999999998887775 99999999999999999999999999999888887655331
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhH--HHhhHh---HHHhhh------h
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESA---SAEVKE------E 267 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~------~ 267 (473)
.+ .+.||..+....+++++..+..+++||+|++...+++.++..+ ++.++. +++.++ +
T Consensus 165 -----~~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 -----SD------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKE 233 (451)
T ss_pred -----cc------cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccc
Confidence 11 2335555577777777777777899999998655443332221 111111 000011 0
Q ss_pred hcccCCccccccccchh-HHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHH
Q 011997 268 EGREATPKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (473)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~ 346 (473)
.++.+..++++++++.. +.......+..............|. +...+..+.+.. -......++..+++.+ .+..
T Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~i~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 308 (451)
T PF00083_consen 234 SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS--PSIFENAGISNS--FLATLILGLVNFLGTL-LAIF 308 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccc--cccccccccccc--cccccccccccccccc-cccc
Confidence 11111346777777552 2222222222222222211222222 223334455554 1122223344445544 4456
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhHHH--HHHHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHH
Q 011997 347 LERILGPIMVARIAGVLTIPLLTSYP--YIAMLSGF--GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (473)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (473)
+.||+|||+.+..+.....++...+. ........ .....+....+....+..+..+..+.+..|.+|++.|+++.|
T Consensus 309 ~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~ 388 (451)
T PF00083_consen 309 LIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIG 388 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 77788999988888877776665553 11111110 112222222222223444667778889999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhhhcc
Q 011997 423 IAMTGMSLFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 423 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 450 (473)
+....+++++.++|.+...+.+..+...
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 416 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWG 416 (451)
T ss_pred cccccccccccccccccccccccccccc
Confidence 9999999999999999999998877433
No 95
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=7.6e-23 Score=201.91 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=229.5
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhh
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 148 (473)
+.+..+... ..+..+++.+|..+|++++|+++||+|||+++++++++..++.++.++++|++.+++.|+++|++
T Consensus 111 ~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~ 184 (521)
T KOG0255|consen 111 NLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFF 184 (521)
T ss_pred ceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 445555555 89999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHH
Q 011997 149 NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 227 (473)
Q Consensus 149 ~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 227 (473)
.+.... ...++.|++++++|+.+..+ ......+..+++..++++.. +||..+++..++..
T Consensus 185 ~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------------~Wr~~~~~~~~~~~ 245 (521)
T KOG0255|consen 185 GSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------------DWRWLFWIISIPSG 245 (521)
T ss_pred ccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHHHH
Confidence 666655 59999999999999999999 77777888888888888764 35555577777777
Q ss_pred HHHHHHhhcccCcCCCCCCCcchhhhH--HHhhH-------hH----HH--hhhh---hcccCCccccccccchhHHHHH
Q 011997 228 GVTIAAFWLPETLHRHNDDDDSCDVSY--DALES-------AS----AE--VKEE---EGREATPKKSLLKNWPLMSSII 289 (473)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~-------~~----~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~ 289 (473)
+.++..+..||+|++...+++.++..+ ++..+ .. .. .+++ ..+.+.....+++.|++....+
T Consensus 246 ~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 325 (521)
T KOG0255|consen 246 LFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTL 325 (521)
T ss_pred HHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHH
Confidence 666666667799998655544322221 11110 00 00 0000 1112244677788876544443
Q ss_pred HHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 011997 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (473)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (473)
...+..+..... |........++|.+. .......+........ ......++.||+.....+..+..++++
T Consensus 326 ~~~~~~~~~~~~------y~gl~~~~~~lg~~~---~~~~~~~~~~~~p~~~-~~~~~~~~~gR~~~~~~~~~~~~~~~~ 395 (521)
T KOG0255|consen 326 YLLFIWFVFSLV------YYGLSLNVSGLGGNI---YLNFTLSGLVELPAYF-RNGLLLPEFGRRPPLFLSLFLAGIGLL 395 (521)
T ss_pred HHHHHHHHHhHH------HHhhhhhhhhcCchH---HHHHHHHHHHHhhHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 333322111111 111111122233332 3333333445555554 445555667999999999988888888
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 370 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
...+....... ....+...+..++........+.+..|.+|+..|+.+.+..+....++.+++|.+.-....
T Consensus 396 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 396 LFGWLPDDLGG---WLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHhhccchh---HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 87776543321 1222233333334445555568899999999999999999999999999999998765544
No 96
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.92 E-value=5.1e-22 Score=186.08 Aligned_cols=358 Identities=17% Similarity=0.229 Sum_probs=252.6
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC-CchhhHHHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVVI 124 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-rr~~~~~~~~~~~~ 124 (473)
+....++.++..+...|..+.+.++.|.+..| +|.+.++..+...++++++|.++||++ +||.+.+..++.++
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 45566677777888889999999999999999 999999999999999999999999986 57788777777777
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHH-HHHhccccccCCC
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL-GGFLAQPAEKYPN 202 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i-~~~l~~~~~~~~~ 202 (473)
........++++.+++.-++..+......|. .++..+... ++++-.|-.....++|.+++... ++.+..
T Consensus 81 ~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~------- 151 (400)
T PF03825_consen 81 ALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGG------- 151 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHh-------
Confidence 7777778889998888887877776666664 666666554 44556666677777777777554 222322
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccc
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (473)
..++. .....+.+.+...++.....+.+|+.|++++.+++.++ ....+..+++|+|
T Consensus 152 ~~~~~------~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~~ 207 (400)
T PF03825_consen 152 YLGIS------GTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKNP 207 (400)
T ss_pred hhccc------cccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcCc
Confidence 11111 11122233333333344445567877633222211111 1112335789999
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCC-CChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
++....+..++.......+.++.+.|+.. .| .+....+...++..+..++.-. ..+++-+|+|.++++.++.
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~------~gg~~~~~~g~~~~l~~~aEi~~f~-~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQE------LGGYSGSTIGILWALGVVAEIPFFF-FSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHH
Confidence 99888888888777777777777777543 24 6677788888888888888766 6677777889999999998
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHH-HHHHHHhhhhhhh
Q 011997 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGG 440 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g 440 (473)
+...+=..++....... ...+..........+............++.+.+|++.|++++++++.. ..+|..+|..++|
T Consensus 281 ~~~~vR~~l~a~~~~~~-~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPW-PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred HHHHHHHHHHHHhcCCc-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 88887777776542110 011111222234566666677788889999999999999999999865 5799999999999
Q ss_pred HHHHHhhhcc
Q 011997 441 ALFSWAQKRL 450 (473)
Q Consensus 441 ~l~~~~g~~~ 450 (473)
+++|+.|...
T Consensus 360 ~l~~~~g~~~ 369 (400)
T PF03825_consen 360 WLYDAFGARG 369 (400)
T ss_pred HHHHHhcchh
Confidence 9999988665
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=2e-21 Score=184.11 Aligned_cols=386 Identities=15% Similarity=0.125 Sum_probs=248.5
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc----ccCCchh
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~ 114 (473)
|.++++.++...+...+......+.++.+.+++|.+..+ .+++..+..+...+.+|+.|+++| |+||||.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 346677777777777888888889998899999999988 999999999999999999999999 5999999
Q ss_pred hHHH-HHHHHHHHHHhhccccHH-----------------HHHHHHHHHhhhcchh-HhHHHHhhhhccccch--hhhhH
Q 011997 115 IIMG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLNGLL-GPIKAYACEIFREEHQ--ALGLS 173 (473)
Q Consensus 115 ~~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~ 173 (473)
++.+ .....++.++.+++++.. .++++-.+..++.... .|..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8875 666666667777766543 2222333334455544 4469999999998866 57999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCcccccc--ccc--CCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCc
Q 011997 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES--LFG--KFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDD 248 (473)
Q Consensus 174 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~ 248 (473)
+.+...++|..+|+.++++..... .+++.. ..+ ..+.+..|.+.++..++. ++..+..||.+...+++.+
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~ 230 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch
Confidence 999999999999999998752100 111110 000 124566667766655554 4555678887643221110
Q ss_pred chhhhHHHhhHhHHHhhhhhcccCCcccccc----c-cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCCh-
Q 011997 249 SCDVSYDALESASAEVKEEEGREATPKKSLL----K-NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST- 322 (473)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (473)
++ +.++.+ +.+.....++++ + .|.++..++..++..+..+.+..+.+.|..... ++-++
T Consensus 231 ~~-----~~~~~~------~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v----~~~~~~ 295 (477)
T TIGR01301 231 NS-----EAAPPS------KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREV----YGGSVN 295 (477)
T ss_pred hh-----hccccc------ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH----cCCCCc
Confidence 00 000000 000001112222 2 245677777777665555555444444432211 11111
Q ss_pred -----hh----HHHHHHHHHHHHHHHHHhhHHHHHHhhh-hhHHHHHHHHHHHHHHhHHHHHHHhhh-------------
Q 011997 323 -----QM----VGEVLAITGFSLLVFQLSLYPFLERILG-PIMVARIAGVLTIPLLTSYPYIAMLSG------------- 379 (473)
Q Consensus 323 -----~~----~g~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 379 (473)
++ ..+.....++...+.++ ....+.|++| ||+....+.++..+++....+.....+
T Consensus 296 ~~~~y~~gvr~G~~~l~~~s~~~~i~s~-~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~ 374 (477)
T TIGR01301 296 QGAKYDDGVRAGAFGLMLNSVVLGITSI-GMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP 374 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Confidence 11 12334444555556665 4566777787 466668887777777777765543211
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc--chhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccc
Q 011997 380 --FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ--DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 380 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 451 (473)
.......++.....|+.........++++++..++ +..|..+|+.|.+..+.+.+.....|.+.+..|+...
T Consensus 375 ~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~ 450 (477)
T TIGR01301 375 PPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNL 450 (477)
T ss_pred cchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 00123445555566677778888899999998884 5669999999999999999999999998888886543
No 98
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.91 E-value=9.1e-22 Score=181.24 Aligned_cols=363 Identities=12% Similarity=0.051 Sum_probs=218.9
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+|+..|+..+ +.......|.+.+|+|++.+|. .|.+.++++.++++.+++.|+++||+|.|+++.++.+.+++
T Consensus 31 ~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 31 YLCFYGFMAQF-RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34444444333 5666677889999999998762 78999999999999999999999999999999999999999
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 204 (473)
.+++.++++++..+.+.|++.|++.|...+...++..++|+++|+++.++...+..+|.++++++++++. .+
T Consensus 105 ~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~--------s~ 176 (511)
T TIGR00806 105 VWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV--------TL 176 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hc
Confidence 9999999999999999999999999988855999999999999999999999999999999999999943 46
Q ss_pred cccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCC---CCCCCcchhhhHHHhhHh---HH--Hhhhhh-------c
Q 011997 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR---HNDDDDSCDVSYDALESA---SA--EVKEEE-------G 269 (473)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~~~~~~~~~~~~---~~--~~~~~~-------~ 269 (473)
|||+.. ....+.....++.++..+++|..++. ++++..+ +....+.+.. .. ..+..+ +
T Consensus 177 gWr~y~------~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (511)
T TIGR00806 177 GWISYS------TLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVR-GALPCELDQMVPGPGGKLEDYLGTCRDSFLV 249 (511)
T ss_pred CchhHH------HHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccc-cccccccccCCCCCccccchhhhhhhhHHHH
Confidence 777643 34444444455556667788844331 1110000 0000000000 00 000000 0
Q ss_pred ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHH-HhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHH
Q 011997 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS-LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (473)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~ 348 (473)
.-....++..+||.++.-.+-..+....+....++.. +|-......+. -.|..-++..+.+.+..+ ..+.+.
T Consensus 250 ~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~------yNG~veA~~tllga~~a~-~ag~~~ 322 (511)
T TIGR00806 250 RMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNK------YNGAVDAASTLLGAITSF-IAGFVN 322 (511)
T ss_pred HHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccc------cCCHHHHHHHHHHHHHHH-HHHhhc
Confidence 0011233445666654444333333222222222221 22111110111 234444444445555555 333333
Q ss_pred HhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHH
Q 011997 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (473)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (473)
.+..+...+.++.....-+..+ .+... ....| ...+..++....-....++...-+++....+.-|...|+++++.
T Consensus 323 ~~w~~~~~l~l~v~s~~~~gll-~~m~~--t~~Iw-~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 323 IRWARWSKLLIAVVSAIQAGLV-FWMSQ--SHDIW-VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVA 398 (511)
T ss_pred CCchhhHHHHHHHHHHHHHHHh-hhhhc--ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHH
Confidence 2222222222222222211111 11111 11333 34444444444445555666666666677788899999999888
Q ss_pred HHHHHhhhhhh
Q 011997 429 SLFKAAGPAGG 439 (473)
Q Consensus 429 ~~g~~~~~~~~ 439 (473)
-+-+.+-..+.
T Consensus 399 l~LQtilT~iV 409 (511)
T TIGR00806 399 TALKTIITAVV 409 (511)
T ss_pred HHHHHheEEEE
Confidence 87777766654
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=3.6e-21 Score=187.38 Aligned_cols=374 Identities=13% Similarity=0.040 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~ 118 (473)
+.++.++...+...+..+...+.++.+ .+++|.+..+ .+++.+.+........+++|+++|| +|||++++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 345566667777777777777777655 5889999888 8888877776666667899999999 5999999999
Q ss_pred HHHHHHHHHHhhccc-cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccc--hhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
.++..++..++++++ +.+.++++|+++|++.|...+. .+++.|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888874 5667778899999999987775 889999998653 456888889999999999999999998
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHHH----HHHhhcccCcCCCCCC-CcchhhhHHH---------hhHh
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT----IAAFWLPETLHRHNDD-DDSCDVSYDA---------LESA 260 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~~~~~~~~-~~~~~~~~~~---------~~~~ 260 (473)
+ .+|||+.| ...++..++.+ .....++|..+..+.+ .+..+..... ....
T Consensus 175 ~-------~~g~~~~F---------~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
T PRK09584 175 A-------KYGWSVAF---------ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL 238 (500)
T ss_pred H-------hhCHHHHH---------HHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 8 45555444 44443222222 2222344432111111 1111100000 0000
Q ss_pred HHHhhh--------------hhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCc--c-cc-CCCCCCh
Q 011997 261 SAEVKE--------------EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSP--K-KL-GGLNYST 322 (473)
Q Consensus 261 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~ 322 (473)
..+.+. ..........+.-|+|. +..+... +....+.......+.++... . .. ...|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~- 315 (500)
T PRK09584 239 LHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKM-IVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA- 315 (500)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceE-
Confidence 000000 00000000011112222 1111111 11111112222222221110 0 00 001211
Q ss_pred hhHHHHHHHHHHHHHHHHHhhH---HHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhh---hhhHHHHHHHHHHHHHHH
Q 011997 323 QMVGEVLAITGFSLLVFQLSLY---PFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLL 396 (473)
Q Consensus 323 ~~~g~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 396 (473)
...+...+...+..++..++.. +++.+|.+..+...++.++..+++..+....... +....++.....++.+.+
T Consensus 316 i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~g 395 (500)
T PRK09584 316 VEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIG 395 (500)
T ss_pred ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHH
Confidence 2245555666666666655333 2333344455667777777777776665543321 111123466666777888
Q ss_pred HHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 397 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
.....|...+++.+..|++.||+++|+......+|..++..+.
T Consensus 396 e~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 396 ELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999976655555555544444
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=4e-20 Score=178.77 Aligned_cols=364 Identities=16% Similarity=0.085 Sum_probs=224.2
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhh-HHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc----cCCch
Q 011997 39 PITELFSIWIIVLCTALPISSLFPF-LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~ 113 (473)
++++.+.-.+..+............ .+.+.+++|++..+ +|.+.++..+..++..|+.|.++|| +||||
T Consensus 7 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrr 80 (444)
T PRK09669 7 TTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFR 80 (444)
T ss_pred cHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcc
Confidence 3444443333333333333333443 45667889999999 9999999999999999999999998 88754
Q ss_pred -hhHHHHHHHHHHHHHhhcccc------HHHHHHHHHHHhhhcchh-HhHHHHhhhhc-cccchhhhhHHHHHHHHHHHH
Q 011997 114 -VIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLL-GPIKAYACEIF-REEHQALGLSTVSTAWGIGLI 184 (473)
Q Consensus 114 -~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ 184 (473)
.++.+.+..++..++....++ ...+++...+.+.+.... .|-.++.+|+. ++++|.+..++......+|..
T Consensus 81 p~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 81 PYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 455676777776655544432 455566666667654443 44578899988 568899998988888888888
Q ss_pred HHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHH
Q 011997 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (473)
Q Consensus 185 ~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (473)
+++.+...+.. .++... . +.+|+....+.++..++.. +..+..+|.+++.++++ .
T Consensus 161 i~~~~~~pl~~-------~~~~~~-~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~---~------------ 216 (444)
T PRK09669 161 IVSVIALPLVD-------ILGKGD-E-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDNS---S------------ 216 (444)
T ss_pred HHHHHHHHHHH-------HhCCCc-h-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcCC---C------------
Confidence 88876665554 121110 1 3355655555555544443 33344455422211000 0
Q ss_pred hhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhh
Q 011997 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (473)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~ 343 (473)
+.....++++|||+++...+..++............ .|+.... .+ ++...+.......+..+++.+ .
T Consensus 217 ------~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~-~y~~~~~----~~-~~~~~~~~~~~~~i~~ii~~~-~ 283 (444)
T PRK09669 217 ------SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGAT-LYYVNYV----LL-RPDLATLFLVTGMIAGLFGAL-L 283 (444)
T ss_pred ------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhh-heeeeee----cC-CHHHHHHHHHHHHHHHHHHHH-H
Confidence 011235667899998887776665544433333323 3322221 12 233334444444566666655 5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------cch
Q 011997 344 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQ 416 (473)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 416 (473)
..++.||+++++....+.....+....+.+.. . .....+.+..++.+.+.....+..+++.+|.+| .+.
T Consensus 284 ~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~ 359 (444)
T PRK09669 284 SERLLGKFDRVRAFKWTIVAFVILSALIFFIP---P-SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRL 359 (444)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC---c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCc
Confidence 56677778998888777655443332222211 1 122223444455666667777888999988876 234
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 417 RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 417 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
.|...|..+....+|.++|+.+.|.+.+..|..
T Consensus 360 ~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 360 DGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 567789999999999999999999999998874
No 101
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=9.8e-21 Score=173.76 Aligned_cols=366 Identities=14% Similarity=0.153 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+..+......+...+..+...|..|...++ .|++.+| .|.+.++..+...+.+|+.|.++||.|.||-+++.+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 456666677777788888899999877765 8999999 999999999999999999999999999777665544
Q ss_pred HHHHH--HH-HHhhcc----ccHH-HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 120 ASVVI--FN-TLFGLS----VNFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 120 ~~~~~--~~-~~~~~~----~~~~-~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
.+..+ +. +...+. .|.+ ..+++-+..|+......|+ .+++.+.. ++.+.-.|-.....++|.+++..++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 33221 22 222222 2221 2222223333333333343 55554443 3345566777788899999999999
Q ss_pred HHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhc-ccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhc
Q 011997 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (473)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (473)
|.+.+ . +....+++....+++..++.+.. |+.+++.+..+.+..+. ++
T Consensus 159 G~L~~----------------i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~ 207 (412)
T PF01306_consen 159 GILFN----------------I-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DK 207 (412)
T ss_dssp HHHHH----------------H-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------------------
T ss_pred heeee----------------e-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CC
Confidence 99986 1 12233444454444444444433 33332221111110000 01
Q ss_pred ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 011997 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (473)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 349 (473)
...+...+++|+|++|...+........+..+.+.++.|..... +..+.+....|++.+..-+..++.-. ..+++-+
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f--~~~~~g~~~~G~l~s~~v~~E~~~m~-~~p~li~ 284 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF--QSAGQGNQMYGYLWSVQVFLEALMMF-FSPWLIN 284 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--SSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccChhHHhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 11123467899999998877666655555666655666654432 22345667789999998888888866 7888888
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHH-HHHH
Q 011997 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGM 428 (473)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~ 428 (473)
|+|.|+.+.++..+..+=..+..+.. .. +.+...-.+.+.-.........-++++.+|++..++...+. +...
T Consensus 285 rig~k~~Lllag~i~~iRi~~~~~~~-----~~-~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~ 358 (412)
T PF01306_consen 285 RIGAKNLLLLAGVIMAIRIIGSGFAT-----NP-WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK 358 (412)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHT-------SH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred hcChHhHHHHHHHHHHHHHHHHhhhc-----ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence 89999999999888887777765532 22 23555556665555666677788889999999999999986 6888
Q ss_pred HHHHHhhhhhhhHHHHHhhhcccccc
Q 011997 429 SLFKAAGPAGGGALFSWAQKRLDASF 454 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~~g~~~~~~~ 454 (473)
+++..+.+.++|.++|+.|...+.+.
T Consensus 359 ~~~~~i~s~~~G~lyd~~G~~~tyli 384 (412)
T PF01306_consen 359 QIGIIILSPLAGYLYDRIGFQHTYLI 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHhhHhhcCcHHHHHH
Confidence 99999999999999999997665433
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=3.5e-19 Score=169.63 Aligned_cols=378 Identities=14% Similarity=0.088 Sum_probs=215.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-CCchhhHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM 117 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~ 117 (473)
.+.+..++.......+..+.....+|.+ .+++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||++++
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 3456666666667777777777777766 4668999988 99999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhhccc-cHHHHHHHHHHHhhhcchhHh-HHHHhhhhcccc--chhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 118 GTASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
+.++..++.++.+..+ +...+.++..+.++|.|...+ ..++++|.+|++ +|.+++++.+...++|..++|.+.+++
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776543 223344444455566676666 488999999876 699999999999999999999999999
Q ss_pred ccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCC---CCCCcchhhhHH--------------H
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH---NDDDDSCDVSYD--------------A 256 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~~~~~~--------------~ 256 (473)
.+ .+||+..| ...++..++.++..+..++...+. ++++.++++... .
T Consensus 162 ~~-------~~Gw~~~F---------~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (493)
T PRK15462 162 QE-------EYSWAMGF---------GLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPA 225 (493)
T ss_pred Hh-------hhChHHHH---------HHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88 44554444 444433333333222222111110 011110010000 0
Q ss_pred hhHhH-HHhh-h---------------hhcccCCccccccccchhHHH---HHHHHHHHhhhhhhhHHHHHhhcCccccC
Q 011997 257 LESAS-AEVK-E---------------EEGREATPKKSLLKNWPLMSS---IIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (473)
Q Consensus 257 ~~~~~-~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (473)
..... .+.. . .....+....+ | ++++.. .+...++...+....+.+..|.......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--r-~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~ 302 (493)
T PRK15462 226 LITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQ--R-KELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRD 302 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH--H-hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccch
Confidence 00000 0000 0 00000000000 1 122211 11122222222222223333433221111
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh--h--hH--HHHHHHHHHHHHHhHHHHHHHhh---hhhHHHHHH
Q 011997 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--P--IM--VARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLN 387 (473)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~--~--~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 387 (473)
-+|++ ...+...+...+..++.+++....-.++.+ | .. =..++.++..++...+....... +.....+++
T Consensus 303 ~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~ 381 (493)
T PRK15462 303 MFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMV 381 (493)
T ss_pred hccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHH
Confidence 12322 224555566666666666644443333211 1 11 14456666666655554433221 112334466
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 388 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
...++.+.+.....|...+.++++.|++.+|..+|+.... +.++++.++|.+.+..
T Consensus 382 ~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 382 LGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 6667778888899999999999999999999999998442 2244444445554443
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=8.5e-21 Score=183.21 Aligned_cols=372 Identities=12% Similarity=0.050 Sum_probs=235.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-hhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC-----Cchh
Q 011997 41 TELFSIWIIVLCTALPISSLF-PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPV 114 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~~ 114 (473)
..+..+...++..++. .... +..|.+.+++|++.++ .+...+...+...+-.+ +|+++||++ ||+.
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~ 97 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWY 97 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHH
Confidence 3444555566777777 4444 4445666789999999 99999999999988555 999999998 7787
Q ss_pred hHHHHHHHH-HHHHHhhccccHHHHH-HHHHHHhhhcchhHhH-HHHhhhhccccchhhhh---HHHHHHHHHHHHHHHH
Q 011997 115 IIMGTASVV-IFNTLFGLSVNFWMAV-LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGL---STVSTAWGIGLIIGPA 188 (473)
Q Consensus 115 ~~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~~~~ 188 (473)
++++.++.. +.....+..++..... +..++.+++.+...++ .++..|..+ |++.... +......++|..+|+.
T Consensus 98 l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~ 176 (468)
T TIGR00788 98 LVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSL 176 (468)
T ss_pred HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHH
Confidence 788776663 4434444445544444 4788899988887775 999999998 5554433 3333445589999999
Q ss_pred HHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchh-hhHHHhhHhHHHhhhh
Q 011997 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD-VSYDALESASAEVKEE 267 (473)
Q Consensus 189 i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 267 (473)
+++.+.+ .++|+ ..+.+.+...++..+...++||++.....+.++++ ........ ...+.
T Consensus 177 l~G~l~~-------~~~~~---------~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 237 (468)
T TIGR00788 177 LGGPLLD-------KTLTR---------ILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTL---GVLAN 237 (468)
T ss_pred HHHHHHH-------hcCcc---------hHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhh---hHHHH
Confidence 9999988 44444 44466665555555556777886421111110000 00000000 00000
Q ss_pred hcccCCccccccccchhHHHHHHHHH-HHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHH
Q 011997 268 EGREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (473)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~ 346 (473)
.++.....++.+++|.++...+..++ +...... ..+.++. ..+..|+++.+.|......+++.+++.....++
T Consensus 238 ~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~---~~~~f~~---~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~ 311 (468)
T TIGR00788 238 VKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA---SGSVFCA---TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRF 311 (468)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC---CceeEEE---EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 01111223445677777765554444 2211111 1111111 223479999999999999999999998855555
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhHHHHHH-Hh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHH
Q 011997 347 LERILGPIMVARIAGVLTIPLLTSYPYIA-ML---SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (473)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (473)
.+|.+.++.+.++.++..++........ .. ..............+..............++.+..|++.+|+..+
T Consensus 312 -~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 312 -LKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFA 390 (468)
T ss_pred -HhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHH
Confidence 4677888888888777776654332111 00 000111122333334444555556666888889999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhh
Q 011997 423 IAMTGMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 423 ~~~~~~~~g~~~~~~~~g~l~~~~g 447 (473)
+.+.+.++|..+++.++|.+.++.|
T Consensus 391 l~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 391 LLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999988
No 104
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=7.2e-20 Score=178.08 Aligned_cols=368 Identities=12% Similarity=0.066 Sum_probs=227.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc----ccCC-chhhH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPVII 116 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Gr-r~~~~ 116 (473)
.+.-.++.+...+......+.++ ++.+.+|++..+ +|.+..+..+..++..|+.|.++| |+|| |+.++
T Consensus 8 ~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il 81 (473)
T PRK10429 8 KLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL 81 (473)
T ss_pred HHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh
Confidence 33333444455555566666555 455667999998 999999999999999999999999 6798 55566
Q ss_pred HHHHHHHHHHHHhhcccc------HHHHHHHHHHHhhhcchhHh-HHHHhhhhc-cccchhhhhHHHHHHHHHHHHHHHH
Q 011997 117 MGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPA 188 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (473)
++....+++..++...++ +..+++..++.+++.....+ -.++.+|+. ++++|.+..++.....++|..+.+.
T Consensus 82 ~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 82 IGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred hhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777777655544331 33455556666776555544 488899998 6899999999877777777666666
Q ss_pred HHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhh
Q 011997 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (473)
Q Consensus 189 i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (473)
+...+.. .+|.... ..+|+....+.++..++. ....+..||.++....++++++
T Consensus 162 ~~~~~~~-------~~g~~~~--~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~---------------- 216 (473)
T PRK10429 162 FTLPFVN-------YVGGGDR--GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS---------------- 216 (473)
T ss_pred HHHHHHH-------HhCCCch--hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc----------------
Confidence 5554433 1111000 123444444444443333 3333446665322111100000
Q ss_pred hcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
+.+.....+.+++||+++..++..++............++|.... ..+....+.......++.+++.+ ...++
T Consensus 217 ~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~------~~~~~~~~~~~~~~~i~~ii~~~-~~~~l 289 (473)
T PRK10429 217 HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV------IGDADLFPYYLSYAGAANLVTLI-LFPRL 289 (473)
T ss_pred CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE------CCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 000112234567888888777776666554444433333222211 22455566677766678888777 55677
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------cchhhHH
Q 011997 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAA 420 (473)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~ 420 (473)
.||+|+|+.+..+..+..++...+........ .....+.+..++.+.......+...++.+|.+| .+..|..
T Consensus 290 ~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~ 368 (473)
T PRK10429 290 VKSLSRRILWAGASIFPVLSCGVLLLMGLAAP-HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIA 368 (473)
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHH
Confidence 88889999888777665544444332211111 222233344445555666667778888888866 3445668
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 421 NGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 421 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
.|.......++.++++.+.|.+.+..|..
T Consensus 369 ~s~~~~~~K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 369 YSVQTMVVKGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999988864
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.86 E-value=8.3e-19 Score=169.75 Aligned_cols=352 Identities=12% Similarity=0.079 Sum_probs=216.6
Q ss_pred hhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc-----
Q 011997 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (473)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----- 132 (473)
+.+....|.+.+++|.+..+ .+++.++. .....++++.|++.||+|||+++.++.+++.++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 44556678899999999988 88888774 4456778889999999999999999999999999999987
Q ss_pred -ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHH-HHHHHHHhccccccCCCccccccc
Q 011997 133 -VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLAQPAEKYPNLFSSESL 209 (473)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~~~~~~~~~~gw~~~ 209 (473)
++++.+.+.|++.|+|.+...+ +...+.+++| ++||++.|+.....++|.++ +++..+++.+ +|+
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~---------~~~-- 184 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD---------NTS-- 184 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hHH--
Confidence 6899999999999999887766 4778899997 78999999999999999975 5555555432 122
Q ss_pred ccCCcchhHHHHHHHHHHH-HHHHHhhcccCcCCC----CCCCcchhhhH------------------------------
Q 011997 210 FGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRH----NDDDDSCDVSY------------------------------ 254 (473)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~----~~~~~~~~~~~------------------------------ 254 (473)
..++..++..++ .++...++++.+... +.+.+++++..
T Consensus 185 -------~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 185 -------AYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred -------HHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 222333333333 344444444433211 11111111110
Q ss_pred --------HH-hh--H-------h-HH---------------------H-h-h--h-------------h--------h-
Q 011997 255 --------DA-LE--S-------A-SA---------------------E-V-K--E-------------E--------E- 268 (473)
Q Consensus 255 --------~~-~~--~-------~-~~---------------------~-~-~--~-------------~--------~- 268 (473)
+. .+ . . .. + . + + + +
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 00 00 0 0 00 0 0 0 0 0 0
Q ss_pred --cccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCC-CCCh-hh-HHHHHHHHHHHHHHHHHhh
Q 011997 269 --GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL-NYST-QM-VGEVLAITGFSLLVFQLSL 343 (473)
Q Consensus 269 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~g~~~~~~~~~~~i~~~~~ 343 (473)
.....+.++.+++..+|.+...+++.........+-..+... .+ |.+. .+ ...+.++.++.+.+|++ .
T Consensus 338 ~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~------sl~g~~~~~~~~~~~vsL~si~~~~GRl-~ 410 (591)
T PTZ00207 338 IAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYT------ALAGEAPDDALNTLLTVLNGVGSAVGRL-C 410 (591)
T ss_pred CCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHH------HhcCCCCCccceeeehhhhhHHHHhhHH-H
Confidence 000013344556677888888777766554444333332221 12 3312 21 22256777888888877 4
Q ss_pred HHHHH----Hhhh----hhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Q 011997 344 YPFLE----RILG----PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD 415 (473)
Q Consensus 344 ~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (473)
.+..+ ||.. ++........+..+..+++... .+ ...+.+..++.+++.+...+......+|++. +
T Consensus 411 ~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~--~p----~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k 483 (591)
T PTZ00207 411 MSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT--LP----KAALPLPYFIAAFANGFMAATIALVTRTIFA-K 483 (591)
T ss_pred HHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH--CC----ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-c
Confidence 44444 3321 1122222222222222322221 11 1245566666677778888889999999999 8
Q ss_pred hhhHHHHHHHHHHHHHHHhh-hhhhhHHHHHhhhc
Q 011997 416 QRGAANGIAMTGMSLFKAAG-PAGGGALFSWAQKR 449 (473)
Q Consensus 416 ~~g~~~g~~~~~~~~g~~~~-~~~~g~l~~~~g~~ 449 (473)
+-|+-.-+.....-+|..+- -.+.|.++|.-...
T Consensus 484 ~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k 518 (591)
T PTZ00207 484 DPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADK 518 (591)
T ss_pred chHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888888777777887776 56889999876643
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.1e-22 Score=169.06 Aligned_cols=365 Identities=15% Similarity=0.097 Sum_probs=234.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASV 122 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~ 122 (473)
...|+..+.+++....-.....++.+|.+++.++ ..++.++|.....+.++++|++.|| +|-|..-++-+...
T Consensus 47 v~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 47 VFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred HHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 3445555556666666666667778888888888 8999999999999999999999996 88887777767777
Q ss_pred HHHHHHhhc---cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 011997 123 VIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (473)
Q Consensus 123 ~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 198 (473)
.++.++++. .+.+|+++++|++.|+|.-...++ ..+...|++.|+.+.++|+......+|+.+--.+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 777777664 689999999999999986666665 8999999999999999999999999999887777777766211
Q ss_pred cCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccc
Q 011997 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (473)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
. .++-.. +..--+...+....+...++...-+ ...+++ . +++. +.++....+.....+.
T Consensus 201 ~---~~~~~g---hT~LG~~l~~~~~tc~~slical~l----g~~D~r---A----eril----h~e~g~~Ge~pkLtdv 259 (459)
T KOG4686|consen 201 R---MFPGVG---HTLLGLWLCFEVKTCKQSLICALSL----GLSDDR---A----ERIL----HLEEGFLGEEPKLTDV 259 (459)
T ss_pred H---hcccch---HHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhH---H----HHHH----hhhcCcccCCcccccc
Confidence 0 010000 0000000011111111111111000 000000 0 0000 0000000000111111
Q ss_pred -cccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHH
Q 011997 279 -LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (473)
Q Consensus 279 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 357 (473)
--.|++|...++++++....+.+...-+.+++ +++|+|+..++.+.+.....+.+.+.+.+ .+.|+.|++...
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~-----~rfGlS~~~a~~i~s~vy~Isav~spvfg-~i~Dk~G~n~~w 333 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQ-----KRFGLSAVSAGNILSTVYGISAVLSPVFG-AISDKYGFNLWW 333 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHH-----HhhCCChhhccchhhhhhhhhhhhhhhHH-HhHhhhcceehh
Confidence 12477888888888877776666655555543 45899999999988888777777777454 455556776655
Q ss_pred HHHH-HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhh
Q 011997 358 RIAG-VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (473)
Q Consensus 358 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 436 (473)
..+. +...++...+.+... .++ ..+.+.+..........+..++.++|+++.|++.|..+..+++|-++.|
T Consensus 334 v~~a~~~tl~~H~~l~Ft~l----sPy----~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 334 VASACILTLLGHSGLFFTFL----SPY----TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred HHHHHHHHHHHhhhHHhhhc----cHH----HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHh
Confidence 5444 333444444433211 222 2222333333444445677788889999999999999999999999999
Q ss_pred hhhhHHHHHhhhc
Q 011997 437 AGGGALFSWAQKR 449 (473)
Q Consensus 437 ~~~g~l~~~~g~~ 449 (473)
.++|.+.|..|++
T Consensus 406 Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 406 IIAGFIADGDGSY 418 (459)
T ss_pred hhhheeecCCCch
Confidence 9999999988753
No 107
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.85 E-value=6.3e-18 Score=161.54 Aligned_cols=344 Identities=17% Similarity=0.113 Sum_probs=235.4
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHH-HHHHHHHHHHhhcc-ccHHH-HHHHHHHHhhhcchhHhH-HH
Q 011997 82 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG-TASVVIFNTLFGLS-VNFWM-AVLTRFLLGSLNGLLGPI-KA 157 (473)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~-~~~~~~~~~~~~~~-~~~~~-l~~~r~l~G~~~g~~~~~-~~ 157 (473)
.+.++..++..+..++..|+.|.++|+-|+||.++.. ..+..+++....+. ++.+. ..+.-++.-++.+...+. .+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888999999999999999999999977666554 45555566666553 44443 334444444566665665 89
Q ss_pred Hhhhhccccch--------------------------hhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccc
Q 011997 158 YACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (473)
Q Consensus 158 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~ 211 (473)
++.|+.+++++ ++..+.-.....+|..+.-++.-.+....++. .. .
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~-------~~-~ 221 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST-------AS-N 221 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-------cc-c
Confidence 99999999888 89988888888899888888776665421111 00 0
Q ss_pred CCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHH
Q 011997 212 KFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 290 (473)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (473)
.++.|..+...++.-++. +...+++||.|+.+..++.. +......++ -....++..|.|.....++.
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-~~~~~g~~~-----------l~~t~k~~~~~~~~~~fLia 289 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-SYLRFGFKR-----------LWRTFKEIRKLRQLFLFLIA 289 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-hHHHHHHHH-----------HHHHHHHHHhChHHHHHHHH
Confidence 234566556655554443 45566788876532221111 100011111 11234555677888888888
Q ss_pred HHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh--HHHHHHHHHHHHHH
Q 011997 291 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTIPLL 368 (473)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 368 (473)
++++.-.......+...|... .+|++..+...+.....+.+++++. ..++++||+|.| +.+........+..
T Consensus 290 ~~l~~dg~~ti~~~~~i~a~~-----~lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~~~i~ 363 (477)
T PF11700_consen 290 YFLYSDGVNTIISFAGIYATE-----VLGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILWIIIP 363 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hcCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 888776666666666666543 3699999999999999999999998 677899999988 66655554442222
Q ss_pred --hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 369 --TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
.++++.....+......+.+..++.+.+.+..++...++.+++.|+++.+..+|+++......+.+||.+.|.+.+.+
T Consensus 364 ~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 364 LYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred HHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122111111122333345666677778888999999999999999999999999999999999999999999999999
Q ss_pred hhccc
Q 011997 447 QKRLD 451 (473)
Q Consensus 447 g~~~~ 451 (473)
|+.+.
T Consensus 444 g~~r~ 448 (477)
T PF11700_consen 444 GSQRY 448 (477)
T ss_pred CCchh
Confidence 86653
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.85 E-value=1.1e-19 Score=174.99 Aligned_cols=344 Identities=15% Similarity=0.127 Sum_probs=245.6
Q ss_pred hHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc----ccCCchhhH-HHHHHHHHHHHHhhcc-c---
Q 011997 63 FLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII-MGTASVVIFNTLFGLS-V--- 133 (473)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~~~-~~~~~~~~~~~~~~~~-~--- 133 (473)
..+.+.+.+|+++.. .|.+..+..+..++..|+.|.++| |+||||..+ ++....+++.+++... +
T Consensus 24 ~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~ 97 (428)
T PF13347_consen 24 LLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGL 97 (428)
T ss_pred HHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchh
Confidence 345667778999988 999999999999999999999999 899766655 6778888877777765 4
Q ss_pred ----cHHHHHHHHHHHhhhcchhHh-HHHHhhhhcc-ccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCccccc
Q 011997 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (473)
Q Consensus 134 ----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~ 207 (473)
....+.+..++..++...... ..++.+|..+ +++|.+..+....+..+|..+...+.+.+.+. +|..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~-------~g~~ 170 (428)
T PF13347_consen 98 SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSW-------FGGG 170 (428)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhh-------hccC
Confidence 223456666667777666544 5899999997 57999999999999999998777777777652 2211
Q ss_pred ccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHH
Q 011997 208 SLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (473)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (473)
.. ..+|+....+.++..++. ++..+..+|.+++.+++++ +.+..+..++++|||+++.
T Consensus 171 ~~--~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 171 DT--SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred cc--chHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHH
Confidence 10 014555555555555544 3444556772111111111 1122345778899999998
Q ss_pred HHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHH
Q 011997 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (473)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (473)
..+..++............++|.... .|.+ ...+.......++.+++.+ ...++.||+|+++....+..+..+
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~~-~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGSP-LWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHHH-HHHHHHHHccceeehhhhHHHHHH
Confidence 88888887776666666665554433 2333 4556666677778888777 668888999999999999998888
Q ss_pred HHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------cchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 367 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
+.+++.+... .......+...+.+.+........+++.+|..| +++.|...|+.+....++..+++.+.
T Consensus 303 ~~~~~~~~~~----~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 303 GFLLLFFLGP----GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHh----hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 8877766532 233344555556666667777888889998886 34579999999999999999999999
Q ss_pred hHHHHHhhhccc
Q 011997 440 GALFSWAQKRLD 451 (473)
Q Consensus 440 g~l~~~~g~~~~ 451 (473)
|.+.+..|....
T Consensus 379 g~~l~~~Gy~~~ 390 (428)
T PF13347_consen 379 GLLLALVGYDAN 390 (428)
T ss_pred HHHHHHhCcCCC
Confidence 999999887654
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.85 E-value=3.5e-18 Score=165.57 Aligned_cols=359 Identities=16% Similarity=0.109 Sum_probs=214.2
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc----CCch
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRKP 113 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----Grr~ 113 (473)
++++.+.-.++.+..........+.++ ++.+.+|++..+ +|.+.+...+..++..++.|+++||. ||||
T Consensus 6 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~ 79 (448)
T PRK09848 6 SWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFR 79 (448)
T ss_pred cHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCch
Confidence 344444334444455555555555444 556667999998 99999999999999999999999996 7777
Q ss_pred hh-HHHHHHHHHHHHHh-hc----ccc--HHHHHHHHHHHhhhcchhHh-HHHHhhhhcc-ccchhhhhHHHHHHHH---
Q 011997 114 VI-IMGTASVVIFNTLF-GL----SVN--FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWG--- 180 (473)
Q Consensus 114 ~~-~~~~~~~~~~~~~~-~~----~~~--~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~--- 180 (473)
.. .++.+...+..++. .. +++ ....++...+.+++.+...+ ..++..|..+ +++|.+..+.-..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~ 159 (448)
T PRK09848 80 PFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTF 159 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 55 55555444444332 21 112 23344455667777666655 4666666654 4678887666554333
Q ss_pred --HHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHh
Q 011997 181 --IGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDAL 257 (473)
Q Consensus 181 --~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 257 (473)
++..++|.+++.... .. ...|.....+..+.+++. ++.....||+++.+.++. .
T Consensus 160 ~~~~~~~~p~i~~~~g~-------~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~----~----- 216 (448)
T PRK09848 160 VCLAFLIGPSIKNSSPE-------EM-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP----S----- 216 (448)
T ss_pred HHHHHHHHHHHHHhCCC-------ch-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC----C-----
Confidence 455556665543321 00 001111111222222222 223334555432211110 0
Q ss_pred hHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHH
Q 011997 258 ESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL 337 (473)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 337 (473)
....+++++|||+++...+..++............++|... .+|.+....++......++.+
T Consensus 217 -------------~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~ 278 (448)
T PRK09848 217 -------------LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRY-----VLNDTGLFTVLVLVQNLVGTV 278 (448)
T ss_pred -------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEee-----ecCChHHHHHHHHHHHHHHHH
Confidence 01135668899999888777777665555554444444332 246666555554444455666
Q ss_pred HHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--
Q 011997 338 VFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD-- 415 (473)
Q Consensus 338 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 415 (473)
++.+ ..+++.||+++++.+..+..+..++...+.+.. ....+. ..+..++.+.+.....+...++..+..|.+
T Consensus 279 ~~~~-l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~---~~~~~~-~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 279 ASAP-LVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS---VWSLPV-ALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred HHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC---chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 6666 555667778999998888877666655544321 112222 333344455555666677788888877654
Q ss_pred -----hhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 416 -----QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 416 -----~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
.+|...|+.+....+|.++++.+.|.+.+..|..
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999999999987754
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.83 E-value=2e-18 Score=157.50 Aligned_cols=285 Identities=15% Similarity=0.103 Sum_probs=193.8
Q ss_pred hccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCC-ccccc
Q 011997 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSSE 207 (473)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~-~~gw~ 207 (473)
+...+++.++++-++.|.|.+...+. +.++++..++|++.+.+++.+.+.++|..++|.+++.+......... ..+-.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999998885 99999999999999999999999999999999999998842100000 00000
Q ss_pred ccccCCcchhHHHHHHHHHHHHHHHHhh--cccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhH
Q 011997 208 SLFGKFPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (473)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (473)
... .+.|+.++...+...++..+.+.+ +||.++++.+ + ... + +....++.+|+|.++
T Consensus 85 ~~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~--~--~~~--------------~--~~~~~~~~~~~~~~~ 143 (310)
T TIGR01272 85 NAE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA--R--VSS--------------G--DTTQKTSAFQFTHLV 143 (310)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc--c--ccc--------------c--cccchhhHHhhHHHH
Confidence 000 124566666444443333333333 3443211110 0 000 0 001123467788888
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHH
Q 011997 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (473)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (473)
...+..+++.....+...+.+.|+... ..+|+++.+.+...+....+.+++++ ...++.+|+++++.+..+..+..
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr~-~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGRF-IGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHH
Confidence 877888888778888889999887532 23589999999999999999999998 66677778888888887776666
Q ss_pred HHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
+...+..... + ... . ....+.+++....+|...+...+..|+ +.+++.++. ....+|+++.|.+.|.+.|.
T Consensus 220 ~~~~l~~~~~---~--~~~-~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 220 LLSIGAALTH---G--YVA-M-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHcC---C--HHH-H-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 6554333221 1 111 1 223345567778889888888887774 466777775 67789999999999999998
Q ss_pred hhh
Q 011997 446 AQK 448 (473)
Q Consensus 446 ~g~ 448 (473)
.+.
T Consensus 291 ~g~ 293 (310)
T TIGR01272 291 LGI 293 (310)
T ss_pred ccc
Confidence 764
No 111
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.82 E-value=1.6e-19 Score=167.55 Aligned_cols=387 Identities=16% Similarity=0.172 Sum_probs=241.4
Q ss_pred CCCCChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH--hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCC-
Q 011997 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR- 111 (473)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr- 111 (473)
.++.+||.+++..+..++.....+.+.+..-.+.++ .+.+.+. .|++.++..++.+++++.+|+...|.++
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~~~ 101 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTGSV 101 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccCCc
Confidence 345568888888999999999999999988777777 4555555 9999999999999999999999999997
Q ss_pred chhhHHHHHHHHHHHHHh-hc---cc-cHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHH
Q 011997 112 KPVIIMGTASVVIFNTLF-GL---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (473)
Q Consensus 112 r~~~~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (473)
|+.++.|.++..++.++. ++ .+ ..+.++++|++.|+|.|......+|+++....++|.++++....+..+|..+|
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilG 181 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILG 181 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHh
Confidence 888999999999999988 33 23 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCccccccc--ccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHH
Q 011997 187 PALGGFLAQPAEKYPNLFSSESL--FGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (473)
Q Consensus 187 ~~i~~~l~~~~~~~~~~~gw~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (473)
|.++..+..... -|+... ..-..+-.+.++.++..++.+ .+.++++|.++...+++.+.+++ .. .
T Consensus 182 p~~q~~f~~Lg~-----~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~------~~-~ 249 (488)
T KOG2325|consen 182 PTIQLAFTPLGE-----KGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE------EK-S 249 (488)
T ss_pred HHHHHHHhhhcC-----CceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh------hc-c
Confidence 999888775321 122211 101235566667777666654 44556777665543332211100 00 0
Q ss_pred hhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChh----hHHHHHHHHHHHHHHH
Q 011997 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ----MVGEVLAITGFSLLVF 339 (473)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~i~ 339 (473)
++++.+.. -+..+..+......+...+.........+.. ....++++.. ..|...+..++..+..
T Consensus 250 ~~~~~~~~------~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~-----~m~~y~w~~~~av~~~gi~~~~~g~ls~~~ 318 (488)
T KOG2325|consen 250 DIEKVKKP------KLDWVAVLVCIFLRFVVNFIATTIETLSSAL-----TMVMYGWTGSEAVLYNGITLSISGILSVIL 318 (488)
T ss_pred chhhhccC------ChhHHHHHHHHHHHHHHHHHHHHHHhccchH-----HHHHhccccchHHHhhhhHHHHHHHHHHHH
Confidence 00000000 0111111222222222222222222222211 2222344444 3455566655555555
Q ss_pred HHhhHHHHHHhhhhhHHHHHHHHHHHHHH--hHHHHHHHhhh--------------hh---------HHHHHH-HHHHHH
Q 011997 340 QLSLYPFLERILGPIMVARIAGVLTIPLL--TSYPYIAMLSG--------------FG---------LAFLLN-CASVVK 393 (473)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--------------~~---------~~~~~~-~~~~~~ 393 (473)
.+.....-.+++.+|+.+..+........ ..+++...... .. +++.+. ...+..
T Consensus 319 ~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~ 398 (488)
T KOG2325|consen 319 LLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVF 398 (488)
T ss_pred HHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhhee
Confidence 44222222233344444444433333332 22222111100 00 111111 112222
Q ss_pred HHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc
Q 011997 394 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 450 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 450 (473)
+...-.+.....+..++...|.+++++.|+.......+..++|.+...++...|...
T Consensus 399 g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~ 455 (488)
T KOG2325|consen 399 GIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRP 455 (488)
T ss_pred ccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccH
Confidence 222223334567788889999999999999999999999999999999999988764
No 112
>PRK11462 putative transporter; Provisional
Probab=99.82 E-value=1.2e-16 Score=154.37 Aligned_cols=362 Identities=14% Similarity=0.058 Sum_probs=215.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc----cCCchh
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPV 114 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~~ 114 (473)
+++.+.-.++.+............+ ..+.+..|+++.. +|.+..+.-+--++..|+.|.++|| +||||.
T Consensus 8 ~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp 81 (460)
T PRK11462 8 VKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP 81 (460)
T ss_pred HhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch
Confidence 3333333333333444444444444 4556778999998 9999999999999999999999995 798766
Q ss_pred hH-HHHHHHHHHHHHhhcccc------HHHHHHHHHHHhhhcchhH-hHHHHhhhhcc-ccchhhhhHHHHHHHHHHHHH
Q 011997 115 II-MGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLG-PIKAYACEIFR-EEHQALGLSTVSTAWGIGLII 185 (473)
Q Consensus 115 ~~-~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~-~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~ 185 (473)
.+ ++.+..+++.+++-..++ ...+++...+..++..... |-.++.+|..+ ++||.+..++...+..+|..+
T Consensus 82 ~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~ 161 (460)
T PRK11462 82 WVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML 161 (460)
T ss_pred hHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55 566777777666554442 3445556666677655544 45888899886 789999999999999999888
Q ss_pred HHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHh
Q 011997 186 GPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEV 264 (473)
Q Consensus 186 ~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (473)
++.+...+.+. +|.+. - ..+|+....+.++++++.. +.....+|.++.++++ ...
T Consensus 162 ~~~~~~plv~~-------~g~~~-~-~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~----~~~----------- 217 (460)
T PRK11462 162 STVLMMPLVNL-------IGGDN-K-PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTT----TSM----------- 217 (460)
T ss_pred HHHHHHHHHHH-------hCCCc-h-hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccC----CCH-----------
Confidence 88887666542 22110 0 1234444444444443333 2233345543221110 000
Q ss_pred hhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhH
Q 011997 265 KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLY 344 (473)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ 344 (473)
....+..++||+++......++.............+|.... .+ ++...+.......++.+++.. ..
T Consensus 218 -------~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g-~~~~~~~~l~~~~i~~iig~~-l~ 283 (460)
T PRK11462 218 -------REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LG-TPEVFVAFLTTYCVGNLIGSA-LA 283 (460)
T ss_pred -------HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cC-ChHHHHHHHHHHHHHHHHHHH-HH
Confidence 11345677888887766555554444333333333332221 22 233445566666777788776 66
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------cchh
Q 011997 345 PFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQR 417 (473)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 417 (473)
+++.||+++|+....+.....+...++.+.. ....+. ..+..++.+++.....+..+++..|..+ .+..
T Consensus 284 ~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~ 359 (460)
T PRK11462 284 KPLTDWKCKVTIFWWTNALLAVISLAMFFVP---MQASIT-MFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLT 359 (460)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhc---hhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCch
Confidence 7777777887776544443333222222211 111111 1222233344444555666777777666 3344
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 418 GAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 418 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
|...+.......+|.++++.+.|.+.+..|..
T Consensus 360 g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy~ 391 (460)
T PRK11462 360 GISFAGTLFVLKLGLAFGGALIGWMLAYGGYD 391 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55567777899999999999999999987764
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.6e-17 Score=151.83 Aligned_cols=374 Identities=16% Similarity=0.116 Sum_probs=259.3
Q ss_pred CCChHHHHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc----cCC
Q 011997 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGR 111 (473)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Gr 111 (473)
+.+.++...-....+............+. .+...+|+++.. +|.+..+.-+--++.-|+.|.+.|| +||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 34445555455555555555555555555 445678999998 9999999999999999999999995 887
Q ss_pred ch-hhHHHHHHHHHHHHHhhcccc------HHHHHHHHHHHhhhcchh-HhHHHHhhhhcc-ccchhhhhHHHHHHHHHH
Q 011997 112 KP-VIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLL-GPIKAYACEIFR-EEHQALGLSTVSTAWGIG 182 (473)
Q Consensus 112 r~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g 182 (473)
|| -++++.+..++.+.++-.+++ ....++...+.+++.... .|-.++.+|+.+ ++||.+..++-+...++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 54 556677888888888877663 445566778888886664 445788888875 789999999999999999
Q ss_pred HHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCcchhhhHHHhhHhH
Q 011997 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESAS 261 (473)
Q Consensus 183 ~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (473)
..+...+...+....++-+. ..+|+....+.++.+++.. .+++-.+|...+....+++.
T Consensus 162 ~~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~----------- 221 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV----------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------
Confidence 88877777777663222111 2356665556555555554 34444666554222111100
Q ss_pred HHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHH
Q 011997 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (473)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~ 341 (473)
+++........++|++++..++...+.........+...+|.... .|.+.......+.....+.+++.+
T Consensus 222 ------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~~ 290 (467)
T COG2211 222 ------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGLI 290 (467)
T ss_pred ------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHHH
Confidence 111112344678999998888866666555444445555444332 466666666666666666666555
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------c
Q 011997 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------Q 414 (473)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 414 (473)
....+.|++|+|++..++.++..++...+.+.. .......++..++.+.+.....+..+++++|.+| .
T Consensus 291 -~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~----~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~ 365 (467)
T COG2211 291 -LWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP----AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGV 365 (467)
T ss_pred -hHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc----CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCC
Confidence 778888999999999999888888887776654 2333344455556666777788889999999875 5
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcccc
Q 011997 415 DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDA 452 (473)
Q Consensus 415 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 452 (473)
+.-|...|...++.-+|.+++..+.|++.+..|.....
T Consensus 366 R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~ 403 (467)
T COG2211 366 RREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNV 403 (467)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 66788899999999999999999999999999875543
No 114
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=2.8e-17 Score=155.17 Aligned_cols=375 Identities=19% Similarity=0.261 Sum_probs=246.4
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+.+..+..++......+..+.....++.+.... .....+.......+...+.++..|.++||+|||..+........+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 3444444445554444455555555555443321 111133333334677789999999999999999999999998888
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcch---hHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGL---LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~---~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 201 (473)
..+...+.. |++++ +.|+..+. .....++++|....++|...+++.+.....+..++|.+++.+..
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 888777766 33333 66664333 23348999999999999999999999999999999999999988
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccc
Q 011997 202 NLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (473)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (473)
..+...++.+..+..++. ....+++||+....+++..+.... .... ...++..+........-.
T Consensus 174 ----------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~ 238 (463)
T KOG2816|consen 174 ----------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL----TPGS-LDSSHVADAFQSLTKVGP 238 (463)
T ss_pred ----------hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc----CCCc-ccchhhhhhhhhhcccCC
Confidence 455666666766666655 456677898765544431000000 0000 000000011111112222
Q ss_pred cchhHHHHHHHHHHHhhhhh-hhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHH
Q 011997 281 NWPLMSSIIVYCVFSLHDMA-YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (473)
+|..+......+........ .......| ....++++..+.+...+..++...+++.+....+.+..+.++....
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~y-----l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLY-----LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEE-----EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 33334433333332222211 11111122 3345799999999999999999999999888899999998888888
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
++..-.+....+.+... .|... .......+.....|...+..+..++++++|+++++...+..+...++|.+.
T Consensus 314 Gl~~~~~~~~~~af~~~-----~w~~~--~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFATE-----TWMMF--AAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred HHHHHHHHHHHHHHhcc-----chhhh--HHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHH
Confidence 88888888877776432 22211 112222355677888999999999999999999999999999999999999
Q ss_pred hHHHHHhhhccccccccCC
Q 011997 440 GALFSWAQKRLDASFLPGM 458 (473)
Q Consensus 440 g~l~~~~g~~~~~~~~~~~ 458 (473)
+.++..+........+...
T Consensus 387 ~~i~~~t~~~~~~~~~~~~ 405 (463)
T KOG2816|consen 387 GNIFALTLDDLPGFLFVIS 405 (463)
T ss_pred HHHHHHHHHhccccccccc
Confidence 9999888777666555444
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=1.5e-17 Score=150.14 Aligned_cols=367 Identities=11% Similarity=0.058 Sum_probs=241.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
++...+..+.+.+..-.+.+...+....|| +.+. .-|..-+|++.+....+++-|+.|++|-|...+++....
T Consensus 47 Ll~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 47 LLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred HHHHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 334445555555666666666667777778 5555 889999999999999999999999999999999999999
Q ss_pred HHHHHHhhccc------cHH--HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 123 VIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 123 ~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
+++..+-..+. .++ ....+..+.+...-..... .....-|++++||..+..+-..+..+|.+++.++...+
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 99998776643 334 5556666666666555555 44556699999999999999999999999999999888
Q ss_pred ccccccCCCcccccccccCCcchh--HHHHHHHHHHHH-HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcc
Q 011997 194 AQPAEKYPNLFSSESLFGKFPYFL--PCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (473)
.....+.+ ...|.. .+......+.+. .+..+..++.|+.+....++... +.+
T Consensus 200 V~~~~~~~----------~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~ 254 (480)
T KOG2563|consen 200 VPSSKDSE----------DNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DAS 254 (480)
T ss_pred cCCCCCcc----------hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCc
Confidence 86321111 112222 223222222222 23333344444333322111110 111
Q ss_pred cCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
-..+.++.++|+++....+++..-.....+... .+...... -|++...+|.......+++++++...+.+.||+
T Consensus 255 f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~----~l~~~l~~--sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt 328 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAICYGIGLGLFNSLST----LLNLALCP--SGYEGVFAGYIGALMIVAGMLGALASGIIADKT 328 (480)
T ss_pred HHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHH----Hhhhcccc--ccCCccccchhHHHHHHHHHHHHHHHHhhhhhh
Confidence 234677889999998877777665443333322 22212111 255667889988888899999999777777777
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHH
Q 011997 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (473)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (473)
.+-+...+.......++...+..... .....+.+.......+.+..+..|....+..|..=|..-++..|+.+..+++
T Consensus 329 k~fk~~~~v~~~~~~v~~~~l~~~t~--~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~ 406 (480)
T KOG2563|consen 329 KKFKLTTLVLYLFALVGTLMLLTCTL--FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQI 406 (480)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc--cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhH
Confidence 66666666666555555322222221 1122223444445556677778888888888876667778889999999999
Q ss_pred HHHhhhhhhhHHHHHhhhc
Q 011997 431 FKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 431 g~~~~~~~~g~l~~~~g~~ 449 (473)
-+.+-..+.+...+..+..
T Consensus 407 f~~~~~~~~~~~~~~~~~~ 425 (480)
T KOG2563|consen 407 FGVILVFIMGILAEDLGPP 425 (480)
T ss_pred HHHHHHHHHHHHhhccCCC
Confidence 9999999999988877733
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.77 E-value=1.5e-15 Score=137.06 Aligned_cols=337 Identities=16% Similarity=0.094 Sum_probs=224.7
Q ss_pred HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC-----CchhhHHH-HHHHHHHHHHhhc-----cc-
Q 011997 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMG-TASVVIFNTLFGL-----SV- 133 (473)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~~~~~~-~~~~~~~~~~~~~-----~~- 133 (473)
.+..|++++..- .+...+...+.. ...+.+|+.+|+.+ ||..+++. ......+..+..+ +.
T Consensus 5 VMIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~ 77 (403)
T PF03209_consen 5 VMIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES 77 (403)
T ss_pred hHHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence 356788888776 888888877664 57999999999999 88777764 5555554444433 22
Q ss_pred ------cH--H--HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 011997 134 ------NF--W--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (473)
Q Consensus 134 ------~~--~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 202 (473)
+. + ...+...+.|+|.+..... .++++|..|+|+|+++.++...+..+|.+++..+.+.+.+.
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~------ 151 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP------ 151 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc------
Confidence 22 2 2234446677777766665 99999999999999999999999999999999999998871
Q ss_pred cccccccccCCcchhHHHHHHHHHHHH--HHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccc
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGV--TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (473)
+ ..-|+..++.....+.. .+...+-.|.+..+..+.++++ +......++++..
T Consensus 152 -~--------s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~ 206 (403)
T PF03209_consen 152 -F--------SPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWA 206 (403)
T ss_pred -c--------CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHh
Confidence 1 11233223322222222 1222222333222222111000 1111123455666
Q ss_pred cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHH
Q 011997 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (473)
+|+...+....++.....+.- -..-.|+.-+-+|++..+...+....+.+.+++-...+.++.++.++++...++
T Consensus 207 ~~~a~~f~~fl~l~t~a~~~Q-----D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G 281 (403)
T PF03209_consen 207 SPQARRFFVFLFLGTLAFFMQ-----DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALG 281 (403)
T ss_pred CCChhHHHHHHHHHHHHHHhh-----HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 776665555544433322222 222345555668999999999999999999999887888888888888988888
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 440 (473)
...+.+++.++.......+ ...+....++.++..+.......+...+..++++.|..+|.....+.++..++..++|
T Consensus 282 ~~~~~~~f~lii~a~~~~~---~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 282 CLLGALAFALIILAGPLGS---PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHHHHHhccc---chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777666544332 2233444455555655556666667777788899999999999999999999999999
Q ss_pred HHHHHhhh
Q 011997 441 ALFSWAQK 448 (473)
Q Consensus 441 ~l~~~~g~ 448 (473)
.+.|....
T Consensus 359 ~~~D~~~~ 366 (403)
T PF03209_consen 359 ALRDLVRA 366 (403)
T ss_pred HHHHHHHH
Confidence 99987654
No 117
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.74 E-value=4e-16 Score=140.30 Aligned_cols=344 Identities=10% Similarity=-0.033 Sum_probs=229.3
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH-HHHHHHHHHHHhhcccc--HHH-HHHHHHHHhhhcchhHhH-
Q 011997 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLSVN--FWM-AVLTRFLLGSLNGLLGPI- 155 (473)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~~~~~~~~~~~~--~~~-l~~~r~l~G~~~g~~~~~- 155 (473)
+.+.+...++..+..++.+|+.|.++|+.|+||..+. ...+..+..++..++++ ++. .++...+..++.....+.
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3448899999999999999999999999997666554 44555556666666554 444 445556677776666665
Q ss_pred HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh--ccccccCCCc-ccccccccCCcchhHHHHHHHHHHHHH-H
Q 011997 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL--AQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVT-I 231 (473)
Q Consensus 156 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l--~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (473)
.+++.+..++++-++..+.-.....+|+.+.-++.-.. .....+++.. ++-...- ...-|..+.+.++.-++.. -
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhH
Confidence 99999999998888887777777777776665554222 2111111100 1111111 3344555555555444443 3
Q ss_pred HHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcC
Q 011997 232 AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS 311 (473)
Q Consensus 232 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (473)
..+..|+.+... ....+...+..++ -....++..+++++...++..+++.-.......+-..|..
T Consensus 216 m~~~v~~~~~~~---~~~~~~l~~g~k~-----------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~- 280 (438)
T COG2270 216 MILNVHDAEKIS---SPPPTALRNGFKE-----------LKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA- 280 (438)
T ss_pred HHhccccccccc---ccchHHHHHHHHH-----------HHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH-
Confidence 344455544321 1111111111111 1123455666777777777777766544444444444433
Q ss_pred ccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHH
Q 011997 312 PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASV 391 (473)
Q Consensus 312 ~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (473)
..+|++..+.........+.++++++ ..+++++|++.|+++..+.++..+..+...+... ...+.+..+
T Consensus 281 ----~~~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~------~~~f~i~gl 349 (438)
T COG2270 281 ----ADLGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG------ELDFWILGL 349 (438)
T ss_pred ----HHcCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc------cHHHHHHHH
Confidence 34799999999999999999999998 6779999999998888877766655544433221 223445555
Q ss_pred HHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccc
Q 011997 392 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 451 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 451 (473)
+.+.+.++.+....++..+.+|+++-++.+|+++..+......||.+.+.+.+.+|....
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~ 409 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRA 409 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhh
Confidence 666777889999999999999999999999999999999999999999999999988653
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.74 E-value=5.1e-15 Score=136.33 Aligned_cols=378 Identities=13% Similarity=0.114 Sum_probs=229.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHhc----ccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchh
Q 011997 41 TELFSIWIIVLCTALPISSLFPFL-YFMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPV 114 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~ 114 (473)
|.++.+...-+-.-++++.....+ -++..+++ .++++ +.-+.+.|.--.-+...++|+++|| +|+|++
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 456666666777767665555544 45556666 77776 6666666655555788999999999 899999
Q ss_pred hHHHHHHHHHHHHHhhccc--cHHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc--chhhhhHHHHHHHHHHHHHHHHH
Q 011997 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~i 189 (473)
++.|.++..++.++.+.+. +...++++-.+.++|.|..-+. .++++|.+|++ +|...++++..+.++|+.++|++
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 7888999999999999999884 99999999864 47788899999999999999999
Q ss_pred HHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCC----CCCcchhhhH----H----Hh
Q 011997 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN----DDDDSCDVSY----D----AL 257 (473)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~~~~~~~~~----~----~~ 257 (473)
.+++.+ .+| |...|...++-....++.....+....... ....+.+... . ..
T Consensus 175 ~~~~~~-------~~g---------~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (498)
T COG3104 175 TGLLAI-------NYG---------WHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMIL 238 (498)
T ss_pred HHHHHH-------hhC---------HHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHH
Confidence 999998 444 444445655555555555444443221111 1111111000 0 00
Q ss_pred hHh--HHHhhhh-------------h--cccCCccccccccc-h---hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccC
Q 011997 258 ESA--SAEVKEE-------------E--GREATPKKSLLKNW-P---LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (473)
Q Consensus 258 ~~~--~~~~~~~-------------~--~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (473)
... .....+. . -.......+...+| + ...+.+...++...+....+.+..|.......+
T Consensus 239 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~ 318 (498)
T COG3104 239 AALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQ 318 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccc
Confidence 000 0000000 0 00000000100111 1 122222233333333333344445544332222
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHH--hhh--hhHH--HHHHHHHHHHHHhHHHHHHH-h---hhhhHHHHH
Q 011997 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER--ILG--PIMV--ARIAGVLTIPLLTSYPYIAM-L---SGFGLAFLL 386 (473)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~--~~~--~~~~--~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~ 386 (473)
.+|+ ....+...+...+..++.+++......+ +.+ ++.. ..++..++..+.+++..... . .+..+..++
T Consensus 319 ~~g~-~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~l 397 (498)
T COG3104 319 IFGF-EVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWL 397 (498)
T ss_pred ccce-ecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHH
Confidence 1332 2234556666666666666655555444 211 1122 33445555555554444311 1 222344456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 387 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
+...++..++.....|...+++.+..|+...+.++++.......++.++..+.+.
T Consensus 398 il~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 398 VLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 6666677788888999999999999999999999999988888888888887773
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.72 E-value=4.1e-19 Score=172.03 Aligned_cols=390 Identities=16% Similarity=0.190 Sum_probs=2.9
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+++..+...+........++.+.+.|+++.++ .|++.+.+-++..+..++..++.+|..|-|.+-++.+++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 345555556666667777888999999999999 99999999999999999999999998888889999999999
Q ss_pred HHHHhhccc--------------------------------------------------cHHHHHHHHHHHhhhcchhHh
Q 011997 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (473)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~ 154 (473)
+++++++-+ -+..++++.++.|+|.....+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 998876510 024578899999999999988
Q ss_pred H-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCc------ccc-cccccCCcchhHHHHHHHHH
Q 011997 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL------FSS-ESLFGKFPYFLPCLCISLFA 226 (473)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~------~gw-~~~~~~~~~~~~~~~~~~~~ 226 (473)
. .+|+-|..++++-+..+|+......+|.++|-++++.+.....+++.. ... ..-| -..||+-+++.+...
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 6 999999999999999999999999999999999999888653322211 111 1112 345788888888877
Q ss_pred HHHHHHHhhcccCcCCCCCCCcchhh---hHHHhh-HhHHHh------hhhhcccCCccccccccchhHHHHHHHHHHHh
Q 011997 227 FGVTIAAFWLPETLHRHNDDDDSCDV---SYDALE-SASAEV------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (473)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~---~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (473)
++..+.++..|+..+...+.+++++. ..++.+ +...+. .+..++-+...+++++||.+....+.......
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 77777777777655443111111100 000000 000000 11234445667889999999998888888888
Q ss_pred hhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh--hhHHHHHHHHHHHHHHhHH---
Q 011997 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSY--- 371 (473)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 371 (473)
...++..+.|-|+. .+++.++.+++++.....+.....+.++++++.||++ .|..+....+...+..+++
T Consensus 320 ~~~G~~tF~pKylE-----~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~ 394 (539)
T PF03137_consen 320 IVSGFATFLPKYLE-----SQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPL 394 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHH-----HHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788777776654 4479999999988877777666666667888877764 3444444444443333321
Q ss_pred HHHH--H--------hh-----------------------------h------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011997 372 PYIA--M--------LS-----------------------------G------FGLAFLLNCASVVKNLLSVSIITGLFI 406 (473)
Q Consensus 372 ~~~~--~--------~~-----------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
.+.. . .. + ......+.+..++..+...........
T Consensus 395 ~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~ 474 (539)
T PF03137_consen 395 FFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTL 474 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhe
Confidence 1100 0 00 0 001222223333333333333444455
Q ss_pred hhcccCCcchhhHHHHHHHH-HHHHHHHhhhhhhhHHHHHh
Q 011997 407 LQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 407 ~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~ 446 (473)
..-+.+|+++|+.+.|+... .+-+|..-||.+.|.+.|..
T Consensus 475 i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 475 ITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -----------------------------------------
T ss_pred eeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 55678999999999999975 46678899999999999874
No 120
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.69 E-value=1.5e-15 Score=147.13 Aligned_cols=390 Identities=15% Similarity=0.165 Sum_probs=280.9
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+.+..+...+....+...+..+.+.|+++.++ .|++.+.+-++..+...+..+.+-|.-|-|.+-+|.+++++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 455566666776677778888999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccc-------------------c--------------------------------HH-HHHHHHHHHhhhcchh
Q 011997 125 FNTLFGLSV-------------------N--------------------------------FW-MAVLTRFLLGSLNGLL 152 (473)
Q Consensus 125 ~~~~~~~~~-------------------~--------------------------------~~-~l~~~r~l~G~~~g~~ 152 (473)
+++++++-+ + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999987620 0 22 5678889999999999
Q ss_pred HhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccC-CC--cccc-cccccCCcchhHHHHHHHHHH
Q 011997 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PN--LFSS-ESLFGKFPYFLPCLCISLFAF 227 (473)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~-~~--~~gw-~~~~~~~~~~~~~~~~~~~~~ 227 (473)
.+. .+|+-|...+++-+..+|+......+|.++|-++++++.....++ .. ...- ..-| -..||+-|++.+...+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLL 333 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 886 999999999999999999999999999999999999998754433 11 1111 1112 4468899999998888
Q ss_pred HHHHHHhhcccCcCCCCCCCcchhhhHHHhhH----hHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhH
Q 011997 228 GVTIAAFWLPETLHRHNDDDDSCDVSYDALES----ASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 303 (473)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (473)
+..+.++++|+..++..++.+.++......++ ......+..++-+...+++++||.+...++...+......++..
T Consensus 334 ~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 88888888888766543321111110000000 00011112233455678899999999999999998888888888
Q ss_pred HHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhh--hhHHHHHHHHHHHHHHhHHHHHHHhh---
Q 011997 304 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLS--- 378 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--- 378 (473)
+.|-|+. +++|.++..+..+....++.....+.++++++.||++ .|....+..+...+.++.+.......
T Consensus 414 FlPKyLE-----~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~ 488 (735)
T KOG3626|consen 414 FLPKYLE-----TQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCES 488 (735)
T ss_pred hhHHHHH-----HHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCC
Confidence 8887755 4479999999999988888888888888998888764 34444444444444433321111000
Q ss_pred -----------------h-h------------------------------------------------------------
Q 011997 379 -----------------G-F------------------------------------------------------------ 380 (473)
Q Consensus 379 -----------------~-~------------------------------------------------------------ 380 (473)
. .
T Consensus 489 ~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~ 568 (735)
T KOG3626|consen 489 SPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKN 568 (735)
T ss_pred CcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccC
Confidence 0 0
Q ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH-HHHHHHHhhhhhhhHHHH
Q 011997 381 ---------------GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 381 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~ 444 (473)
.....+++..++..+......+....++-+.+|+|+|..+.|+..+ .+-+|.+-+|++.|++.|
T Consensus 569 ~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 569 GNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred CCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 0022233333333344444445566677788999999999999975 567888899999999998
Q ss_pred Hh
Q 011997 445 WA 446 (473)
Q Consensus 445 ~~ 446 (473)
..
T Consensus 649 ~t 650 (735)
T KOG3626|consen 649 TT 650 (735)
T ss_pred hH
Confidence 75
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.66 E-value=1.3e-13 Score=122.64 Aligned_cols=269 Identities=15% Similarity=0.131 Sum_probs=169.8
Q ss_pred HHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh
Q 011997 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (473)
+.+...+..+..|..-.+.+++|.++.| ++.+....+...++..++.|.++||+|||+.-+..+++.+++++.
T Consensus 43 Y~La~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~- 115 (354)
T PF05631_consen 43 YLLAMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT- 115 (354)
T ss_pred HHHHHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-
Confidence 3344556667778777777899999999 999999999999999999999999999999999999999998864
Q ss_pred hccccHHHHHHHHHHHhhhcchhHhH-HH-Hhhhhcccc----chhhhhHHHH-HHHHHHHHHHHHHHHHhccccccCCC
Q 011997 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KA-YACEIFREE----HQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPN 202 (473)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~-~i~~~~~~~----~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~~~~ 202 (473)
-..++++.++++|++.|++......+ .+ ++.|.-..+ ..+..++... ...++-.+.+.+++-++.+
T Consensus 116 k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~------- 188 (354)
T PF05631_consen 116 KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD------- 188 (354)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH-------
Confidence 45689999999999999999987775 44 566664332 2222222222 1223334444445555544
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHHHHH-hhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcccccccc
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (473)
.. ..+...|+.......++..+.. ..-+|+..+..++.+..+.. ....+.+.+|
T Consensus 189 ~~-------~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~------------------~~a~~~i~~d 243 (354)
T PF05631_consen 189 WF-------GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF------------------REAWRAILSD 243 (354)
T ss_pred Hh-------CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH------------------HHHHHHHHcC
Confidence 11 1223455566655555544333 33455543322211111111 1234556778
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
|+++.+.++..++-.....+ .++.+|.... +-.....|++++..-++.++|+.+......++.+....+....
T Consensus 244 ~ril~LG~~qslFE~smy~F-----VflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~ 316 (354)
T PF05631_consen 244 PRILLLGLIQSLFEGSMYLF-----VFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVF 316 (354)
T ss_pred chhHHHHHHHHHHHHHHHHh-----eeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99888887777765554443 3333443331 1123347899998888999998855566666644444444444
Q ss_pred HHH
Q 011997 362 VLT 364 (473)
Q Consensus 362 ~~~ 364 (473)
.+.
T Consensus 317 ~~a 319 (354)
T PF05631_consen 317 AVA 319 (354)
T ss_pred HHH
Confidence 333
No 122
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=6.2e-15 Score=144.33 Aligned_cols=173 Identities=15% Similarity=0.237 Sum_probs=124.8
Q ss_pred HhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHH--
Q 011997 52 CTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL-- 128 (473)
Q Consensus 52 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~-- 128 (473)
............+|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+++..+.++..+....
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 33444555556777765 567888776 777888888999999999999999999999988877654433322
Q ss_pred -hhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc
Q 011997 129 -FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 129 -~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw 206 (473)
...+++...++++|++.|++.+.... ...++.|.+|++.|+++++.......++..++|.+.+++.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~---------- 404 (490)
T PRK10642 335 ILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES---------- 404 (490)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 22345677888899999887665544 477888999999999999975444556678899999888761
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCC
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (473)
...|+.++....+.+++.++..+++||+|++..+
T Consensus 405 -----~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 -----TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred -----hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1124455555555666666666778999877543
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=1.3e-14 Score=138.87 Aligned_cols=183 Identities=12% Similarity=0.130 Sum_probs=129.8
Q ss_pred HHHhhhhhhhhhhhHHHHHHHhcccccch--hhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 011997 50 VLCTALPISSLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (473)
.++............+.+.++.|.++.+. ......+...++..++..++.++.|+++||+|||+++..+.++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33333333344455576777777554210 0001179999999999999999999999999999999999999988876
Q ss_pred Hhhccc----cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHH-HHHHHHHHHHHHHHHHhccccccCC
Q 011997 128 LFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYP 201 (473)
Q Consensus 128 ~~~~~~----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~~~ 201 (473)
+..... +.+.+++.+++.|++.+...+. ..++.|.+|+++|+++.++.+ ...++|..+||.++|++.+..++.+
T Consensus 297 l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~ 376 (418)
T TIGR00889 297 FFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYG 376 (418)
T ss_pred HHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccc
Confidence 666532 2466778899999998887775 889999999999999999997 6788999999999999988221100
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcCC
Q 011997 202 NLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHR 242 (473)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~ 242 (473)
.+| |+..+...++..++. ++..+++||+.+.
T Consensus 377 -~~~---------~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 377 -TFD---------WQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred -CCc---------hHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 123 444445554444443 4555667776443
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=4.4e-14 Score=141.47 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhc
Q 011997 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF 163 (473)
Q Consensus 85 g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~ 163 (473)
.+...+..++..++.++.|+++||+|||++++.+.++.+++.++.+++++...+++.+++.|++.+...+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445667788999999999999999999999999999999999999988888888889888887665555 489999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcC
Q 011997 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (473)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (473)
|+++|++++|+.+....+|.+++|.+++.+.+ . ....++++.++..++..++..++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999998875 1 2345566666666666666667788654
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.57 E-value=1.7e-13 Score=130.56 Aligned_cols=158 Identities=15% Similarity=0.200 Sum_probs=123.2
Q ss_pred hhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHH
Q 011997 58 SSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (473)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 136 (473)
..+....|.+ .+++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.....+........++.+
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPA 306 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3344556655 4678888877 88888887788888999999999999999988877766665555555677888
Q ss_pred HHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcc
Q 011997 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (473)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (473)
.+++.+++.+++.|...+. ..+..|.+|+ +|+++.++++....+|..++|.+++.+.+ .++|
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g~ 369 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWNY 369 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hhhh
Confidence 8888999888877776554 6778898885 59999999988899999999999999998 4455
Q ss_pred hhHHHHHHHHHHHHHHHHhhccc
Q 011997 216 FLPCLCISLFAFGVTIAAFWLPE 238 (473)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~e 238 (473)
+.++....++.++..+..++.||
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 370 HAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 55556666766666666666665
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.55 E-value=3.6e-14 Score=114.06 Aligned_cols=108 Identities=32% Similarity=0.582 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc
Q 011997 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (473)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (473)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+. ..++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34566788899999999999999999999999999999988888899999999999999998887775 89999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+|++..+..+....+|..++|.+.+.+.+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 99999999999999999999999999987
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=1.8e-13 Score=131.30 Aligned_cols=142 Identities=21% Similarity=0.275 Sum_probs=118.4
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 011997 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (473)
...+.............|.+.++.|.+..+ .+.+.+...++..++.++.|+++||+|||+.+..+.....++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 333333334444455678888888998888 99999999999999999999999999999999887777777777
Q ss_pred HhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..+.++.+.+.+..++.|++.+...+. .++..|.+|+++|++..++.+....+|..++|.+++.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 301 ALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 7777788888878888888876555554 8899999999999999999999999999999999999987
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=9.1e-14 Score=131.83 Aligned_cols=140 Identities=13% Similarity=0.016 Sum_probs=114.3
Q ss_pred HHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh
Q 011997 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (473)
.+.............+.+.++++.++.+ .+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 287 (377)
T TIGR00890 214 FFLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM 287 (377)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3333333333444556667888888777 8999999999999999999999999999999999998888888877
Q ss_pred hccccH--HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 130 GLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 130 ~~~~~~--~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.++. ..+++..++.|++.+...+. ..++.|.+|+++|++..++.+....+|..++|.+.+.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 288 LFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776643 33456677888877766654 8889999999999999999999999999999999999988
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=3.5e-13 Score=128.87 Aligned_cols=161 Identities=19% Similarity=0.165 Sum_probs=126.4
Q ss_pred hhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
........+|.+.++.|. ++ .++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK05122 231 GFGTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 334444555666666555 23 5666778888999999999999999999999999988888888888888888
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCc
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (473)
+.+++.+++.|++.+...+. ...+.|.+|+++|+++.++++....+|..++|.+.+.+.+ ..+
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~g 366 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WFG 366 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcC
Confidence 88888999999998877765 7778899999999999999999999999999999999988 344
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccCc
Q 011997 215 YFLPCLCISLFAFGVTIAAFWLPETL 240 (473)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (473)
|+..+...++..++..+....+++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 367 YPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555666666666555555555533
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=1.5e-13 Score=132.30 Aligned_cols=112 Identities=19% Similarity=0.141 Sum_probs=101.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (473)
.|++.++..++..++.+++|++.||+|||+.+..+..+.+++.++.+++++.+.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999998888888999999999999999987776554 7899999
Q ss_pred ccccchhhhhHH-HHHHHHHHHHHHHHHHHHhcc
Q 011997 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+|++.|++..+. ++....+|.+++|.+.|++.+
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~ 377 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD 377 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887765 577788999999999999998
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=3.7e-13 Score=127.65 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
++++...+..++............|.+.+|+|.++.+ .|++.+...++..+..++.+++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 4444444555555566666667778888889999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHH-HHHHHHHHHHHHHHHHhcc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~ 195 (473)
...+..++.+++++.+.+++.+++.|+..+...+. ..++.+. |+++|++..++++ ...++|..++|.++|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998988885 8899988 9999999999985 5788999999999999998
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.50 E-value=8.3e-13 Score=125.24 Aligned_cols=155 Identities=15% Similarity=0.294 Sum_probs=120.8
Q ss_pred hhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHH
Q 011997 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (473)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (473)
....|.+ .+++|.++.+ .+++.+.......++.++.|++.||+|||+++.++.++..+........++.+.++
T Consensus 219 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALL 292 (375)
T ss_pred HhhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444544 4678988887 88888887777788899999999999999999888777666666666677888888
Q ss_pred HHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhH
Q 011997 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (473)
+.+++.|++.+...+. ..++.|..|+ +|+++.++.+....+|..++|.+++.+.+ ..+|+..
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~~ 355 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHAV 355 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchhH
Confidence 8899999987777665 7888898875 56799999999999999999999999988 3344555
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 011997 219 CLCISLFAFGVTIAAFWLPE 238 (473)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e 238 (473)
+...++..++..+...+++|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 356 YWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHheecC
Confidence 56666666665555555543
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=8.8e-13 Score=123.74 Aligned_cols=163 Identities=22% Similarity=0.316 Sum_probs=136.0
Q ss_pred HHHhhhhhhhhhhhHHHHHHHh-cccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCch-hhHHHHHHHHHHHH
Q 011997 50 VLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNT 127 (473)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~-~~~~~~~~~~~~~~ 127 (473)
.+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344445555566677666664 888887 999999999999999999999999999999 99999999999999
Q ss_pred HhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc
Q 011997 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw 206 (473)
.....++.+.+.+..++.|++.+...+. .+++.|..|+++|++.++..+....+|..++|.+.+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~----------- 326 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD----------- 326 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999999999999999999998887775 9999999999999999999999999999999999999998
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHh
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (473)
..+|+..+...++..++..+..+
T Consensus 327 -----~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 327 -----TGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred -----ccCcchHHHHHHHHHHHHHHHhe
Confidence 33444444666666555544443
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.49 E-value=7.6e-13 Score=127.23 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=129.4
Q ss_pred hhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHH
Q 011997 60 LFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (473)
Q Consensus 60 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (473)
.....|.+.++ +|.+..+ .+++.+...++..++.++.+++.||.++|+.+..+..+..++.++..+.++.+..
T Consensus 242 ~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILA 315 (417)
T ss_pred HHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHH
Confidence 44556777766 8998888 9999999999999999999999999888888888888888888888888888888
Q ss_pred HHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchh
Q 011997 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (473)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (473)
.++.++.|++.+...+. .+++.|..|++.|++++++......+|..+||.+.|++.+ ..+++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~~ 379 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPVA 379 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchhh
Confidence 88889999988777765 7889999999999999999999999999999999999998 333333
Q ss_pred HHHHHHHHH-HHHHHHHhhcccCcCCC
Q 011997 218 PCLCISLFA-FGVTIAAFWLPETLHRH 243 (473)
Q Consensus 218 ~~~~~~~~~-~~~~~~~~~~~e~~~~~ 243 (473)
.+...+... ++..+....+||.++.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccc
Confidence 334433333 33345555667655433
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=3.1e-12 Score=121.78 Aligned_cols=179 Identities=12% Similarity=0.081 Sum_probs=126.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
.+.+.+..++............|.+.+++|.+..+ .+...+.+.++..++.++.|++.||+|||+.+..+..+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 33344444444555556666778887888999888 999999999999999999999999999999999988777
Q ss_pred HHHHHHhhc-cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-ccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 123 VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 123 ~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
.++..+... .++...+ .-++.|++.+...+. .....+..+ +++|++..++.+....++..++|.+.+++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~---- 354 (393)
T PRK09705 281 LVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS---- 354 (393)
T ss_pred HHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 777665543 3332222 224567776666664 556666664 6789999999999999999999999999998
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCC
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHN 244 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ 244 (473)
..| +|...+...++..++.. ....+.||++++.+
T Consensus 355 ---~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 355 ---ISG--------NYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred ---HhC--------CchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 222 23444455555444443 33556677655443
No 136
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=1.2e-12 Score=125.63 Aligned_cols=162 Identities=17% Similarity=0.231 Sum_probs=124.8
Q ss_pred hhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcccc
Q 011997 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (473)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
.......+..+.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+...+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T PRK09874 233 VATGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT 310 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc
Confidence 33344556667666665433222 1122566677778888899999999999999999999998888888877777888
Q ss_pred HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCC
Q 011997 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (473)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~ 213 (473)
.+.+++.+++.|++.+...+. .+.+.+..|+++|++.++..+....+|..+||.+++.+.+ .+
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----------------~~ 374 (408)
T PRK09874 311 PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----------------NY 374 (408)
T ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh----------------hc
Confidence 888999999999998887775 8888899999999999999999999999999999999988 34
Q ss_pred cchhHHHHHHHHHHHHHHHHh
Q 011997 214 PYFLPCLCISLFAFGVTIAAF 234 (473)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (473)
+|+..+...++..++..+..+
T Consensus 375 g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 375 GFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 445555666665555544333
No 137
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=123.04 Aligned_cols=133 Identities=20% Similarity=0.234 Sum_probs=112.1
Q ss_pred hhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcccc
Q 011997 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (473)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
..........|.+.++.+.+ + .++..+.+.++..+++++.|++.||+||||.+..+..+..++.++..+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT 301 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc
Confidence 33344445556666666554 3 556667788888999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.+++.+++.|++.+...+. .+.+.|.+|+++|+++.++.+....+|..++|.+.+++.+
T Consensus 302 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 363 (392)
T PRK12382 302 AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT 363 (392)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999988877765 7888999999999999999999999999999999999998
No 138
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.47 E-value=1.7e-12 Score=123.96 Aligned_cols=171 Identities=15% Similarity=0.238 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhH-HHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~-~~~~~ 121 (473)
++...+..++............|.+.+++|.+..+ .+++.+...++..++.+..|+++||+|||+.+. .+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~ 297 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVG 297 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 33344444445555555666778888889999888 889889999999999999999999999988764 33333
Q ss_pred HHHHHHHhh-----ccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 122 VVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 122 ~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
..+..+... ..++.+..++..++.|++.+...+....+.|..| ++|+++.|+.+....+|..++|.+++.+.+
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~- 375 (402)
T TIGR00897 298 CGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG- 375 (402)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 333332322 2346677778888889876666555556677654 689999999999999999999999999998
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (473)
.++++..+...++..++..+...++
T Consensus 376 ---------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ---------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ---------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555566666655555444443
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.46 E-value=2.9e-12 Score=121.55 Aligned_cols=131 Identities=20% Similarity=0.293 Sum_probs=106.2
Q ss_pred hhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
........+|.+.++.|.++.+ .++..+...++..+++++.|++.||+|||+++..+.....++.+... + .
T Consensus 215 ~~~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~ 285 (381)
T PRK03633 215 VLGSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-Q 285 (381)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-h
Confidence 3344445678888888888877 89999999999999999999999999999999888888777665443 2 2
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.......++.|++.+...|. .+.+.|..|+++++...+..+...++|..+||.++|++.+
T Consensus 286 ~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 286 AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445677788866665664 8888999998888888888888999999999999999998
No 140
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.45 E-value=4.3e-12 Score=121.17 Aligned_cols=356 Identities=15% Similarity=0.167 Sum_probs=209.3
Q ss_pred hhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-----CCchhhHHHHHHHHHHHHHhhcc---
Q 011997 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVIIMGTASVVIFNTLFGLS--- 132 (473)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~~~~~~~~~~~~~~~~~~~--- 132 (473)
.+..|.+.+++|+++++ .....+...+.. ...+++|.++|.+ .||+-++++.++..++.+..+..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 34567888999999999 888888877775 5678999999975 25555566776665555555543
Q ss_pred -ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc--ccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccc
Q 011997 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (473)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~ 208 (473)
.+.....+.-++..+|......+ .+++.|... +++|+...+.......+|.+++..++|.+.+ ..+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~ 155 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQG 155 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeE
Confidence 34556666667777787777664 888888874 3347888889899999999999999999988 444444
Q ss_pred cccCCcchhHHHHHHHHHHHHH-HHHhhcccCcCCCCCCCc-chhhhHHHhhHhHHHhhhhhcccCCccccccccchhHH
Q 011997 209 LFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDD-SCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (473)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (473)
.| .+...+..+.. ...+..+|.+.....+.. ..+...+.... ..++.....++.++.+.++.
T Consensus 156 ~f---------~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~i~~ 219 (433)
T PF03092_consen 156 VF---------LISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFG-------SFREQLSELWRALQQRAIWQ 219 (433)
T ss_pred Ee---------hHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhH-------HHHHHHHHHHHHHhhhHHHH
Confidence 44 44444444443 334444442111111000 00000000000 01111223455666777776
Q ss_pred HHH-HHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHH
Q 011997 287 SII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (473)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (473)
..+ ..++.......... -..|....... +.|+++...+.+..+..++.+++..+..++..+ ..-|++.....++..
T Consensus 220 ~~~~~~~~~~~~~~~~~a-~~fy~~~~~~~-gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~ 296 (433)
T PF03092_consen 220 PILFFIFFFNLPPSISSA-SSFYFQTDALG-GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSV 296 (433)
T ss_pred HHHHHHHHHHhccCCCCc-cEEEEEecccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHH
Confidence 665 33332222111111 01122222111 345899999998877777878777744444444 355555555544443
Q ss_pred HHHhH-HHHHHHhh---h-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhh
Q 011997 366 PLLTS-YPYIAMLS---G-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (473)
Q Consensus 366 ~~~~~-~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 440 (473)
+.... +.+....+ + ... +....-.++.........-......+++.|+..-|+..++...+.++|..++..++.
T Consensus 297 ~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~ 375 (433)
T PF03092_consen 297 LASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGA 375 (433)
T ss_pred HHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33221 11110000 0 011 111122223333334444455667889999999999999999999999999999999
Q ss_pred HHHHHhhhcc
Q 011997 441 ALFSWAQKRL 450 (473)
Q Consensus 441 ~l~~~~g~~~ 450 (473)
.+.+..+...
T Consensus 376 ~l~~~~~vt~ 385 (433)
T PF03092_consen 376 FLMELFGVTR 385 (433)
T ss_pred HHHHHcCCCc
Confidence 9999988544
No 141
>PRK03699 putative transporter; Provisional
Probab=99.44 E-value=3.3e-12 Score=121.72 Aligned_cols=146 Identities=11% Similarity=0.112 Sum_probs=115.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
++...+..++............|.+. +++|.+..+ .+++.+.+.++..++.++.|+++||++||+.+.....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~ 280 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 34444444444445555666778776 567999888 99999999999999999999999999999999888877
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+...+....++.+.+.+..++.|++.+...+. .++..|..| +++++..+.......+|..++|.+.+++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 281 ALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 7777667667778777777778888876666554 667777665 456778888888899999999999999998
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.44 E-value=4.4e-12 Score=121.15 Aligned_cols=148 Identities=13% Similarity=0.085 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchh--hH-
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV--II- 116 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~--~~- 116 (473)
++++...+..++............|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 3445555556666666666667777665 567888887 8999999999999999999999999999961 11
Q ss_pred -----HHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 117 -----MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 117 -----~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
.+.++..+........++.+..+....+.+.+.+ ..+ ..+++.|.+|+++|+++.++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 1111111112222223344444444444444555 445 489999999999999999999999999999999999
Q ss_pred HHhcc
Q 011997 191 GFLAQ 195 (473)
Q Consensus 191 ~~l~~ 195 (473)
+.+.+
T Consensus 368 g~l~~ 372 (399)
T TIGR00893 368 GAIAA 372 (399)
T ss_pred hhhcc
Confidence 99988
No 143
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=6.6e-13 Score=128.63 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=116.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc--CCchhhHH--H
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM--G 118 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~~~--~ 118 (473)
++......++...........+|.+.+++|.+..+ .+++.++..++..+++++.|+++||. ++|+...+ +
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 316 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFA 316 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHH
Confidence 34444444455555555556677788888998888 99999999999999999999999984 33433333 3
Q ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++.+++.++....++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.+++.+.+
T Consensus 317 ~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 317 LLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 3444455556667888999999999999998887775 8899999999999999999999999999999999999987
No 144
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=7.9e-12 Score=119.06 Aligned_cols=145 Identities=12% Similarity=0.124 Sum_probs=110.3
Q ss_pred HHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHH-HHhhccccHHHHHHHHH
Q 011997 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWMAVLTRF 143 (473)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 143 (473)
|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+.. .+..+..++. .+....++.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3445557888888 99999999999999999999999999988754 4444444443 33455677888888889
Q ss_pred HHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHH
Q 011997 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (473)
Q Consensus 144 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 222 (473)
+.|++.+...+. .+.+.|..| ++|++++++.+....+|..+||+++|.+.+ .++++..+...
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~~~~~ 365 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSIGYVG 365 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHHHHHH
Confidence 999987665554 777778766 688999999999999999999999999998 44555555666
Q ss_pred HHHHHHHHHHH
Q 011997 223 SLFAFGVTIAA 233 (473)
Q Consensus 223 ~~~~~~~~~~~ 233 (473)
++..++..+..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 66665544433
No 145
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.42 E-value=2.7e-09 Score=100.08 Aligned_cols=368 Identities=13% Similarity=0.095 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhccc-ccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+....++...+++..+.-+.....|.+..+..-+ --- .+...-.-.+...+.++..|.+.||..|.++...+.
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l 75 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL 75 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH
Confidence 3455678888888888888888888887776432 222 344444455667888999999999999999987776
Q ss_pred HHHHHHHHHhhc------c--c----cHHHHHHHHH---HHhhhcchhHhH--HHHhhhhc------cccchhhhhHHHH
Q 011997 120 ASVVIFNTLFGL------S--V----NFWMAVLTRF---LLGSLNGLLGPI--KAYACEIF------REEHQALGLSTVS 176 (473)
Q Consensus 120 ~~~~~~~~~~~~------~--~----~~~~l~~~r~---l~G~~~g~~~~~--~~~i~~~~------~~~~r~~~~~~~~ 176 (473)
+.--++..+.+. . + +.+....... +.|.-.-....+ .+.=.||. +++.+.+..+...
T Consensus 76 ~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mR 155 (432)
T PF06963_consen 76 VVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMR 155 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHH
Confidence 554433322211 1 1 1222222222 222211112222 22223443 3455566666666
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHH-Hh-------hcccCcCCCCCCCc
Q 011997 177 TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AF-------WLPETLHRHNDDDD 248 (473)
Q Consensus 177 ~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~e~~~~~~~~~~ 248 (473)
-.=.+..+++|++.|.+.+ ..+......+.+...++.+.. ++ ..|+-..+++.+++
T Consensus 156 RIDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~ 219 (432)
T PF06963_consen 156 RIDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSES 219 (432)
T ss_pred HHHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccc
Confidence 6667889999999999987 333333333333333333221 11 12221111111111
Q ss_pred chhhhHH------HhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCCh
Q 011997 249 SCDVSYD------ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (473)
Q Consensus 249 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (473)
+.+...+ ......+..++.-++....++..++.+.+.......+++. ...++......|+... |+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~~------G~s~ 292 (432)
T PF06963_consen 220 ESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKSQ------GYSP 292 (432)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHC------CCCH
Confidence 1110000 0000111111112223456677777776555444444433 3455666666666543 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhh----hHHHHHHHHHHHHHHHHH
Q 011997 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF----GLAFLLNCASVVKNLLSV 398 (473)
Q Consensus 323 ~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 398 (473)
...|..-....+.++.+.. ...++.||+|..+.-.++......++.+.......++. .....++......-.+.-
T Consensus 293 ~~igi~R~~gav~Gl~gT~-~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW 371 (432)
T PF06963_consen 293 SVIGIFRGLGAVFGLLGTW-VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLW 371 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888 88889999998888887777665554433322222221 122223333333333444
Q ss_pred HHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 399 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
+.-....-+++|.+|+++||+..|+-+..+++...+--.+
T Consensus 372 ~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 372 SFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4445677788899999999999999999998887655443
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=4.1e-12 Score=125.20 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=103.4
Q ss_pred hhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc--ccHH
Q 011997 60 LFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFW 136 (473)
Q Consensus 60 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~ 136 (473)
....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+..+..+..++.... .+.+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVW 367 (496)
T ss_pred HHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 445677777 588999988 9999999999999999999999999999999988877766665444332 3344
Q ss_pred HHHHHHHHHhh-hcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 137 MAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 137 ~l~~~r~l~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.+..++.+. +.+......+++.|.+|+++|++.+++.+....+|..+||.+++.+.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 44455555544 344333347788999999999999999999999999999999999998
No 147
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=2.2e-12 Score=123.16 Aligned_cols=147 Identities=20% Similarity=0.215 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
+.......+.............|.+. +++|.++.+ .+...+...++..++.++.|+++||+|||+.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44444444555555555666677666 678888887 89999999999999999999999999999988765544
Q ss_pred HHHHH--HHhhc--cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHH-HHHHHHHHHHHHHHHHHhcc
Q 011997 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 122 ~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+.. +.... .++.+.+++..++.|++.+...+ ..+++.|.+|+++|+++.++. +....+|..++|.+++++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 44333 22222 35677777788888888766666 499999999999999999984 56677899999999999998
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=1.5e-11 Score=116.64 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
++...+..++............|.+.+|.|.++.+ .|.+.+...++..+..++.|++.||+|+|+.+..+.++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 33333334444444444555666677888998887 899999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHH-HHHHHHHHHHHHHHHHhcc
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~ 195 (473)
+++.++.+.+++.+.+++..++.|++.+...+. ..++.+. +++++++..+..+ ....+|..+||.++|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 281 VVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888999999999999999998887775 7777776 5666788888885 5667888999999999998
No 149
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=1.8e-11 Score=119.40 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
.++.+++..++............|.+. +++|.+..+ .++..+...++..++.+++|+++||+|||+.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 344455555555555555666778655 668999988 8999999999999999999999999999988776544
Q ss_pred HHHHHHH--HhhccccHHHHHHHHHHHhhh-cchhHhHHHHhhhhccccchhhhhHHHHHHHHH-HHHHHHHHHHHhcc
Q 011997 121 SVVIFNT--LFGLSVNFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (473)
Q Consensus 121 ~~~~~~~--~~~~~~~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 195 (473)
+..++.. .....++.....+.+++.|++ .+..........|.+|+++|+++.|+.+....+ |..++|.+.|.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 4443322 223345666777888888864 333333356677999999999999999988886 77999999999987
No 150
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=8e-12 Score=119.46 Aligned_cols=143 Identities=20% Similarity=0.257 Sum_probs=113.1
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+++..++............|.+.+++|.+..+ .++..+...++..++.++.|++.||+|||+.+.........
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 334444444455555566678888889998888 99999999999999999999999999999555444444333
Q ss_pred HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
..++....++.+.+++..++.|++.+...+. .+++.|.+|+++|++++++......+|..++|.++|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 328 AVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333333567777888889999988877775 89999999999999999999999999999999999876
No 151
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=2.2e-11 Score=117.54 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=113.9
Q ss_pred hhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc
Q 011997 53 TALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (473)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (473)
............|.+ .+++|.+..+ ...+.....+...++.++.|+++||+|||++++.+.++..++.+....
T Consensus 262 ~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 335 (438)
T PRK09952 262 ELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFM 335 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 333444445556655 4567877765 555555666677888999999999999999998887666554433322
Q ss_pred ---c-ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHH-HHHHHHHHHHHHHHHHhccccccCCCccc
Q 011997 132 ---S-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (473)
Q Consensus 132 ---~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~~~~~~g 205 (473)
. ++.+.+++..++.+++.+...+. .++++|.+|++.|+.+.++.. .+..+|..++|.+.+++.+. .
T Consensus 336 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~-------~- 407 (438)
T PRK09952 336 ALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY-------F- 407 (438)
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-------c-
Confidence 2 23444455566667777766664 889999999999999988864 44558999999999999862 1
Q ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHhhcccC
Q 011997 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (473)
..+|..++....+..++..+..+.++|+
T Consensus 408 ------~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 408 ------GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 1234555566666666666666666663
No 152
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.36 E-value=1.5e-11 Score=119.35 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc--CCchhhH-HH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVII-MG 118 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~~-~~ 118 (473)
++...+..++...........+|.+.++ .|.+..+ .++....+.++..++.++.|+++||+ |||+... ..
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 3444444444444445566677877655 7888877 88888899999999999999999999 5554322 22
Q ss_pred HHHHHHHHHHhhc--cccHHHHHHHHHHHhhhcch-hHhHHHHhhhhccccchhhhhHHHHHHHHHHHH-HHHHHHHHhc
Q 011997 119 TASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLA 194 (473)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~ 194 (473)
..+..++.+.... ..+.+...++.++.|.+... ......+..|.+|+++|+++.|+.+....+|.. .+|.+.+.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2333333322222 33444444544555553222 222345678999999999999999888888765 4899999999
Q ss_pred c
Q 011997 195 Q 195 (473)
Q Consensus 195 ~ 195 (473)
+
T Consensus 409 ~ 409 (452)
T PRK11273 409 D 409 (452)
T ss_pred H
Confidence 8
No 153
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=7.4e-12 Score=118.19 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=114.8
Q ss_pred hhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcccc-HHHHH
Q 011997 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (473)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 139 (473)
...|.+.++ +|.+..+ .+++.+...++..++.++.+++.||+|||+.+..+..+.+++.....+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777765 7888888 999999999999999999999999999999999888888888877777774 88888
Q ss_pred HHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..++.|++.+...+. .+++.|.+|+++|++..++.+....+|..++|.+++.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887775 8999999999999999999999999999999999999987
No 154
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.35 E-value=2e-09 Score=99.10 Aligned_cols=366 Identities=13% Similarity=0.075 Sum_probs=210.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
..+|+..|+..+- ..-....|++.+. .|.+.+|- ..-+.-...-.+....++...+.|..+.|++++++.+..
T Consensus 8 ~llc~~gf~~~fr-PsEPfl~~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~ 81 (412)
T PF01770_consen 8 LLLCLFGFFKEFR-PSEPFLTPYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHHHhcC-CCCccchHHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3444444444432 2222233455544 78887762 223444455566778888999999999999999999999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 011997 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (473)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 202 (473)
.+...+..+.++...+-+..+.-|++.+....-++++-...|+++-.++.+....+..+|..++.++|..+..
T Consensus 82 i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs------- 154 (412)
T PF01770_consen 82 IITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS------- 154 (412)
T ss_pred HHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999888866668888888899999999999999999999999999998875
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCC---CCCCCcchh---hhHHHhhHhHHHh---hhhhc----
Q 011997 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR---HNDDDDSCD---VSYDALESASAEV---KEEEG---- 269 (473)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~~~---~~~~~~~~~~~~~---~~~~~---- 269 (473)
++ ..++.....+......+.++..+++|..++. ++..+++.+ ...+..++..++. ++.+.
T Consensus 155 -~~------~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (412)
T PF01770_consen 155 -FG------GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESS 227 (412)
T ss_pred -hc------CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccc
Confidence 22 3445555555555555566666778775542 111111000 0000000000000 00000
Q ss_pred -------ccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHH-HhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHH
Q 011997 270 -------REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS-LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (473)
Q Consensus 270 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~ 341 (473)
.-....++..++|.++.-.+-..+....+....++.. +|-.. ..-+-...-.|.+-+...+.+.++.+
T Consensus 228 ~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v----~~~~~~~vYNG~VeA~~tllgA~~al 303 (412)
T PF01770_consen 228 SRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTV----PPSDNESVYNGAVEAASTLLGAIAAL 303 (412)
T ss_pred hHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhc----CCCCCCcccchHHHHHHHHHHHHHHH
Confidence 0112334455677766555544443333332222222 22211 11122333456666666666666666
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHH
Q 011997 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAAN 421 (473)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 421 (473)
..+.+..+..+...+.++......+..++.. .. ....|. ..+..++.........+....-++.....+.-|...
T Consensus 304 -~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm-~~--t~~Iwv-~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVF 378 (412)
T PF01770_consen 304 -LAGYVKVNWDRWGELALGVFSLLQAGLLFLM-SF--TGNIWV-CYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVF 378 (412)
T ss_pred -HHhHhhcchHHHHHHHHHHHHHHHHHHHHHH-HH--hhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeee
Confidence 4444544444444333333322222222211 11 112232 333333333334445555555566667789999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 011997 422 GIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 422 g~~~~~~~~g~~~~~~~ 438 (473)
|++.+...+-+.+-..+
T Consensus 379 GiNtf~Al~LQtilT~i 395 (412)
T PF01770_consen 379 GINTFVALVLQTILTLI 395 (412)
T ss_pred eeHHHHHHHHHHheEEE
Confidence 99888777766655544
No 155
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.34 E-value=3.1e-11 Score=118.49 Aligned_cols=172 Identities=17% Similarity=0.182 Sum_probs=121.0
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 011997 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (473)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (473)
.+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+..+..+..++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3333333444445556678888899998877 8888999999999999999999999999999999888877776
Q ss_pred HHhhc-----cc------cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 127 TLFGL-----SV------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 127 ~~~~~-----~~------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
++.++ .+ +...+....++.+.......+. ..++.|.+|+++|++++++.+....+|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66652 11 2222333333333322223344 778899999999999999999999999999999999998
Q ss_pred cccccCCCcccccccccCCcchhHHHHHHHHHHHHH-HHHhhcccCc
Q 011997 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETL 240 (473)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~ 240 (473)
+ ..+|+..| .+.++++++.. +..++.||++
T Consensus 444 ~-------~~~~~~~f---------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 E-------SIGVGGVF---------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred H-------hcCcccee---------hhHHHHHHHHHHHHheecccCC
Confidence 7 45555554 44444444443 3344556644
No 156
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=2.9e-11 Score=116.79 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=98.9
Q ss_pred hhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHH
Q 011997 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (473)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (473)
....+|.+.++.|.+..+ .+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 445677777788888877 88888999999999999999999999999999988877766655444322211122
Q ss_pred HHHHHHhh--hcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 140 ~~r~l~G~--~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.-++.|+ +.....+ ...++.|.+|+++|++++|+......+|..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22233333 2222233 46788999999999999999999999999999999999988
No 157
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=5.3e-11 Score=114.92 Aligned_cols=146 Identities=12% Similarity=0.035 Sum_probs=97.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc--CCchhh-HHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IMG 118 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~-~~~ 118 (473)
++.+.+..+............+|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++|+.. ...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 33344444444444455556677666 567999888 89999999999999999999999999 333332 221
Q ss_pred H---HHHHHHHHHhhccccHHHHHHHHHHHhhhcc-hhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 119 T---ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNG-LLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 119 ~---~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
. ....+...... ..+.....+..+..|++.. ........+.|.+|+++|+++.|+.+....+|..++|.+.+++.
T Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 1 11111111112 2333333344444454322 22222556789999999999999999999999999999999999
Q ss_pred c
Q 011997 195 Q 195 (473)
Q Consensus 195 ~ 195 (473)
+
T Consensus 398 ~ 398 (434)
T PRK11663 398 E 398 (434)
T ss_pred H
Confidence 8
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.32 E-value=1.4e-10 Score=112.53 Aligned_cols=136 Identities=18% Similarity=0.260 Sum_probs=121.2
Q ss_pred hhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc
Q 011997 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (473)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 132 (473)
.+....+...+|.+. +++|.+... .|++.+++.+|..+++++.+++.+|+++++.+..+.+.++++.+..+++
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc
Confidence 333344455678776 568888888 9999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
++.+..++.-++.|++....... .+.+.+..|++.|||.+++++.....+..+|.++.|.+.+
T Consensus 305 ~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987776664 8899999999999999999999999999999999999998
No 159
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.32 E-value=1e-10 Score=112.29 Aligned_cols=179 Identities=13% Similarity=0.171 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCc--hhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~~~~ 117 (473)
+++....++.++..-+.+.+......+ .+++|.+..+ ...+..+..+...+|++++|++.||+|.| ++++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 334444445555444444444444444 4589999998 88888888999999999999999999999 89998
Q ss_pred HHHHHHHHHHHhhc--------cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHH
Q 011997 118 GTASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (473)
Q Consensus 118 ~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (473)
++.++.+..+...+ .++.+.+.+.-++.|+..|...+. .++.+|+.|+++.+..+|++....-....+||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 88888666555554 678889999999999998888885 999999999999999999999999999999999
Q ss_pred HHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCc
Q 011997 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (473)
Q Consensus 189 i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (473)
+.+.+.+..+ +.|..+....++.++.++++.++++++
T Consensus 435 l~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 435 LFGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 9999998321 234444555555666666666666543
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=2.1e-11 Score=116.91 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=104.9
Q ss_pred hhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHH-HHhhccccHHH
Q 011997 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWM 137 (473)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~-~~~~~~~~~~~ 137 (473)
.....|.+ .+++|.+..+ .+++.+...++..++.++.|++.||+|||+.+..+..+..+.. ......++.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAV 330 (405)
T ss_pred hhhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHH
Confidence 33445544 4678998888 9999999999999999999999999999999988877653333 23344566677
Q ss_pred HHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 138 AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 138 l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.+..++.|++.+...+ ...++.|.+|+++|++++|+.+....+|..++|++.+.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 331 LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777775444444 48889999999999999999999999999999999999998
No 161
>PRK10504 putative transporter; Provisional
Probab=99.32 E-value=5.1e-11 Score=116.59 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
+.......++............|.+.+ .+|.++.+ .++......++..++.++.|++.||+|||+++..+..+
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~ 336 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG 336 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 344444455555555555566777765 47888877 89898888888888999999999999999999999888
Q ss_pred HHHHHHHhhcc---ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 122 VVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 122 ~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+...+..+. ++.+.+.+..++.|++.+...+. ..++.+..|+++|+.+.++.+....+|..+|+.+++.+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 337 LALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665553 34444555667788887776664 8888899999999999999999999999999999999887
No 162
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=3.9e-11 Score=118.12 Aligned_cols=179 Identities=15% Similarity=0.062 Sum_probs=106.1
Q ss_pred hhhhhhHHHHHHHhcccccchhhh----hh-hhH-HHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc
Q 011997 58 SSLFPFLYFMIKDFQIAKREEDIG----SY-AGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (473)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~----~~-~g~-~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (473)
+......|.+.++.|.+..+.... .. ... ...+..++..++.++.++++||+|||++++.+..+.+++.++.++
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 334445788888888865431100 00 011 233344566678899999999999999998888777776655554
Q ss_pred cc----cHHHHHHHHHHHhhh-cchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc
Q 011997 132 SV----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 132 ~~----~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw 206 (473)
.. +...+...-+...++ .+.......+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+..+.. .|+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~ 461 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPT---KGY 461 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccc---ccc
Confidence 22 111111111111121 2222224677899999999999999999999999999999999887621100 000
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCC
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (473)
.. ..++...+.+.++..++..+..+++||++.+
T Consensus 462 ~~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 462 PT---GIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred cc---cccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 00 0122233344444445444455677987553
No 163
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.4e-10 Score=106.15 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+.++...+..++...+.....+.+ |.+.+..|.+.+. .+++..++.++..+|+.+.|+++|| +.|+.+....
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~ 283 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAAL 283 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHH
Confidence 445545555555555555555544 5666778899988 9999999999999999999999999 9999999887
Q ss_pred HHHHHHHHHhhc-cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 011997 120 ASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (473)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 197 (473)
.+..+..+...+ .++.+..++.-++.|+..+..... ...+++ ..++.++.+.+++....++|..+|..++|.+.+
T Consensus 284 ~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~-- 360 (394)
T COG2814 284 LLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD-- 360 (394)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 777777666555 455666666667766665554443 556666 556899999999999999999999999999999
Q ss_pred ccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh
Q 011997 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (473)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (473)
++++....++.++..++.+...+.
T Consensus 361 --------------~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 361 --------------ALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred --------------hhchHHHHHHHHHHHHHHHHHHHH
Confidence 555666667777776666555443
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.28 E-value=8.2e-11 Score=112.33 Aligned_cols=112 Identities=17% Similarity=0.100 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~ 162 (473)
.|.+.++..+...++.+..|++.||+|||+.+.++..+.++...+...+++.+.+++.+++.|++...... ...+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888899999999999999999999999999998888888878888999999999999998665544 36677888
Q ss_pred ccccchhhhhHH-HHHHHHHHHHHHHHHHHHhcc
Q 011997 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+++.+++..+. .+....+|..++|.++|++.+
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~ 369 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD 369 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH
Confidence 888888887766 578899999999999999998
No 165
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.26 E-value=1.3e-10 Score=110.83 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=102.0
Q ss_pred HHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHH-HHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh
Q 011997 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (473)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (473)
++............+.+.+|.|.++++ .|++...... ...++.++.|++.||+|+|+.+..+..+.++..+..
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~ 291 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW 291 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 334444444445667777889999988 9998888764 666778999999999999999988776653332222
Q ss_pred hc------cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccc-cchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 130 GL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 130 ~~------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.. .++...+.....+.+++.+...+. .+...+..++ +++++.++..+...++|..++|.++|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 292 FAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 234444455555666666666554 6676677765 889999999999999999999999999998
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.25 E-value=3.8e-11 Score=116.39 Aligned_cols=148 Identities=14% Similarity=0.164 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
.+..+.+..++............+.+.++..-+..+ .+++.+...++..++.+++++++||+|||+++..+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~ 296 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPEL------FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILL 296 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 333344444444444444433444444332113334 67777888999999999999999999999999999888
Q ss_pred HHHHHHHhhcc-ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-------ccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 122 VVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGF 192 (473)
Q Consensus 122 ~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 192 (473)
..++.+...+. ++.+.+++..++.|++.+...+. .++++|..+ ++++|...++.+....+|..+++.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 297 MVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776664 45667777888889988877775 888888765 5567999999999999999999999999
Q ss_pred hcc
Q 011997 193 LAQ 195 (473)
Q Consensus 193 l~~ 195 (473)
+.+
T Consensus 377 ll~ 379 (437)
T TIGR00792 377 ILG 379 (437)
T ss_pred HHH
Confidence 987
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=2.6e-10 Score=109.30 Aligned_cols=127 Identities=13% Similarity=-0.003 Sum_probs=101.6
Q ss_pred hhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc-----ccH
Q 011997 62 PFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNF 135 (473)
Q Consensus 62 ~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~ 135 (473)
...|.+ .+++|.++.+ .++......++..++.++.|+++||+|+|+.+..+..+..++.++.... ++.
T Consensus 236 ~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 236 ALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccH
Confidence 344554 4668888877 8888888888889999999999999999999998888777776665542 356
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.+++.-++.|++.+...+. ...... .++++|++..+..+....+|..+|+.+++.+.+
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 67778888899988876654 444433 345899999999999999999999999999887
No 168
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.23 E-value=8.8e-11 Score=111.45 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=106.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCC-chhhHH-HH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIM-GT 119 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~-~~ 119 (473)
++.+.+..++............|.+. +++|.+..+ .++..+...++..++.++.|++.||+.+ |+.... ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 291 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFF 291 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHH
Confidence 33444444545555555556666654 567888888 9999999999999999999999998643 332222 11
Q ss_pred -HHHHHHHHHhhc--cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 120 -ASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 120 -~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
....++...... ..+.....+..++.|+......+ ...+..|.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 292 MALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 111222222222 33455556666777765433333 47788999999999999999999999999999999999998
Q ss_pred ccccCCCccccccc
Q 011997 196 PAEKYPNLFSSESL 209 (473)
Q Consensus 196 ~~~~~~~~~gw~~~ 209 (473)
.+||++.
T Consensus 372 -------~~g~~~~ 378 (379)
T TIGR00881 372 -------GFGWAGA 378 (379)
T ss_pred -------hhccccc
Confidence 6666654
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=4.3e-10 Score=108.65 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=99.7
Q ss_pred hhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH-H--
Q 011997 53 TALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-L-- 128 (473)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~-~-- 128 (473)
............|.+.++ +|.+..+ .++....+.++..++.+++|+++||+|||++++.+..+..+... .
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344445556667877655 7998887 88888889999999999999999999999998876544433221 1
Q ss_pred -hhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHH-HHHHHHHHHHHHHHHhcc
Q 011997 129 -FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 129 -~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~ 195 (473)
....+++....+..++.|++.+...+. ..++.|.+|+++|+++.++... ...++..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 112344444545556666766666654 7788999999999999998644 444567789999999988
No 170
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=8.5e-11 Score=116.11 Aligned_cols=135 Identities=21% Similarity=0.137 Sum_probs=103.0
Q ss_pred HHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH--HHHHHHHHHHhhhcchhHh-HHHHhhhhccc
Q 011997 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFRE 165 (473)
Q Consensus 89 ~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~ 165 (473)
....+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+...+ ...+.+|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456677888999999999999999999999988888877776544 4444555566666555555 48899999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcC
Q 011997 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (473)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (473)
+.|++++|+.+....+|.+++|.+.+ +.+ .++..++.+.+...++..+..+++||+..
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 99999999999999999999999988 432 22344555666666666666678888654
No 171
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.22 E-value=4.3e-10 Score=106.16 Aligned_cols=166 Identities=19% Similarity=0.245 Sum_probs=117.8
Q ss_pred hhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccc--
Q 011997 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-- 133 (473)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-- 133 (473)
+.+.+......+.++-|.+..+ +-+.+....+...+..+++..+.||+|||+.++.+..++.+..+++....
T Consensus 285 Gi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l 358 (485)
T KOG0569|consen 285 GINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFL 358 (485)
T ss_pred CcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555556788889999988 88999999999999999999999999999999999999988887776532
Q ss_pred -cHH------HHHHHHHHHhhhcch-hHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Q 011997 134 -NFW------MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (473)
Q Consensus 134 -~~~------~l~~~r~l~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 204 (473)
+.. ..+++.++..++.+. ..|. .-+.+|.+|++.|..++++......+...+-...-..+.+ .+
T Consensus 359 ~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~-------~~ 431 (485)
T KOG0569|consen 359 SNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN-------VI 431 (485)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hh
Confidence 111 123444444444333 2444 8889999999999999999988888887777666666655 22
Q ss_pred cccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCC
Q 011997 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH 243 (473)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 243 (473)
| -...+...+...+..+..++.+||++.+.
T Consensus 432 g---------~~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 432 G---------PYVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred c---------chhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 2 11222233333344567778899987543
No 172
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.22 E-value=1.1e-10 Score=113.95 Aligned_cols=154 Identities=10% Similarity=0.059 Sum_probs=98.0
Q ss_pred hhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCch-------hhHHHHHHHHHHHHHhhc
Q 011997 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-------VIIMGTASVVIFNTLFGL 131 (473)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~-------~~~~~~~~~~~~~~~~~~ 131 (473)
....+|.+ .+++|.+..+ .+.+.+.+.++..++.+++|+++||+|||+ .......+.++..++...
T Consensus 271 ~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34445554 5667999888 999999999999999999999999998752 223333333344444555
Q ss_pred cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccc
Q 011997 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (473)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~ 210 (473)
.++.+..++.-++.+++.+...+ ..+++.+.. +++|+...|+.+....+|..++|.+.+ ...
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~--------------- 407 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS--------------- 407 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC---------------
Confidence 66666655555666665444333 355666654 478999999987766677766665533 111
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhhcc
Q 011997 211 GKFPYFLPCLCISLFAFGVTIAAFWLP 237 (473)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (473)
..+|+..+.+.+++.++..+..++++
T Consensus 408 -~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 -SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 22344444566655666555555554
No 173
>PRK10054 putative transporter; Provisional
Probab=99.21 E-value=2.1e-10 Score=109.17 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=95.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHhhhcchhHhH-HHHhhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 161 (473)
.+++.+...+.....+++.|++.||+++|+.+..+..+..++.....++ ++.+.+++..++.|+|.+...|. .+.+.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7888888888878888999999999999999999988888887777664 57777778889999998887776 889999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..|++.|++..+..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988655 556899999999999998
No 174
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.21 E-value=6.8e-10 Score=108.55 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=113.9
Q ss_pred HHHHHHhcccccchhhhhhhhHHHH-HHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh---hcc-ccHHHHH
Q 011997 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (473)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (473)
|.+.+++|.+..+ .++... ...++..++.++.|+++||+|||+.+.++.++.++..+.. +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4445678999988 999874 5568999999999999999999998877666555443322 233 4555555
Q ss_pred HHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhH
Q 011997 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (473)
+.-+++.++.|...+. .++..+..+++.+++..++.+...++|..+++.++|++.+ ..+|+..
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----------------~~G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----------------AHGWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhChHHH
Confidence 5666666666655554 7888999999999999999999999999999999999998 3445555
Q ss_pred HHHHHHHHHHHHHHHhhcccC
Q 011997 219 CLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (473)
+.+..++++..++....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 567777777666666556554
No 175
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.21 E-value=3.7e-10 Score=109.25 Aligned_cols=145 Identities=12% Similarity=0.066 Sum_probs=93.5
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (473)
...+..++............|.+.++ .|.+..+ .++....+.++..++.++.|+++||+++|+....+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~ 328 (438)
T TIGR00712 255 YIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMT 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHH
Confidence 33333334344444455667777654 6888888 8999999999999999999999999975443233332221
Q ss_pred ---HHHHHhhc--cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHH-HHHHHHHHHHhcc
Q 011997 124 ---IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLAQ 195 (473)
Q Consensus 124 ---~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~i~~~l~~ 195 (473)
++.+.... ..+.+.....-++.|.+...... ......|.+|+++|+++.|+.+....+| ..++|.+.|.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~ 407 (438)
T TIGR00712 329 LVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 407 (438)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH
Confidence 12122122 22344433444455543222222 2456789999999999999998877776 5789999999998
No 176
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.6e-10 Score=103.17 Aligned_cols=157 Identities=13% Similarity=0.137 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc--CCchhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~~~ 117 (473)
+.++.++++.+..+..+..+.-..|.+. |+.|.+..+ +++..+.+-++...|++++|+++||. |||....+
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~ 325 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH
Confidence 4456778888888888999999998664 667888888 99999999999999999999999994 67766544
Q ss_pred -HHHHHHHHHHHhhccc--cHHHHHHHHHHHhhh-cchhHhHHHHhhhhccccchhhhhHHHHHHHHH-HHHHHHHHHHH
Q 011997 118 -GTASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGF 192 (473)
Q Consensus 118 -~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~ 192 (473)
.++...++.+..-.++ |+++..++-++.|+. .|...-+.....|..|++--|++.|+.+.+..+ |...+....++
T Consensus 326 i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 326 IFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY 405 (448)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee
Confidence 3444444444555555 457777788888885 555544567778999999999999999999888 89999988888
Q ss_pred hccccccCCCcccccccc
Q 011997 193 LAQPAEKYPNLFSSESLF 210 (473)
Q Consensus 193 l~~~~~~~~~~~gw~~~~ 210 (473)
+.+ .+||.+.|
T Consensus 406 i~d-------~~gW~g~F 416 (448)
T COG2271 406 IAD-------TWGWDGGF 416 (448)
T ss_pred eEe-------cCCCcchH
Confidence 888 57777766
No 177
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.20 E-value=5.3e-10 Score=105.12 Aligned_cols=140 Identities=12% Similarity=0.031 Sum_probs=108.0
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhccc-CCchhhHHHHHHHHHHHH
Q 011997 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~~ 127 (473)
...+...........+|.+.++.|.+..+ .+.+.+...++..+++++.|++.||+ +||+.+..+..+..++.+
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence 33334444445556778888888998888 99999999999999999999999999 567777778788877777
Q ss_pred HhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhc-cccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
...+.++..... .-++.|++.+...+. .+.+.+.. ++++++...++.+....+|..++|.+.|++.+
T Consensus 279 ~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 279 GLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred HHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655433332 346789988887775 66665544 45677889999888889999999999999998
No 178
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.20 E-value=7.2e-10 Score=104.46 Aligned_cols=156 Identities=17% Similarity=0.293 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHhc-ccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+.....+..++.......+....+.+.+|.| .+... .+.+.++..++-.+.-...+++..|+|.|++++++.+
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3444555666677777778888888899988 56655 7888888888889999999999999999999999999
Q ss_pred HHHHHHHHhhcc-ccHHHHHHH----HHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHH-HHHHHHHHHHHHHHHh
Q 011997 121 SVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFL 193 (473)
Q Consensus 121 ~~~~~~~~~~~~-~~~~~l~~~----r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~~l 193 (473)
.+++=..+++.. ++.+...+. ..++|+..+....+ ..++.+..|++.|+++.++++. ..++|..+|..++|++
T Consensus 282 ~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999988888877 554444333 45689988888775 9999999999999999999865 5789999999999999
Q ss_pred ccccccCCCcccccccc
Q 011997 194 AQPAEKYPNLFSSESLF 210 (473)
Q Consensus 194 ~~~~~~~~~~~gw~~~~ 210 (473)
.+ .+|-+..+
T Consensus 362 ~~-------~~g~~~~~ 371 (400)
T PF03825_consen 362 YD-------AFGARGMF 371 (400)
T ss_pred HH-------Hhcchhhh
Confidence 98 56655544
No 179
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.19 E-value=1.1e-09 Score=105.62 Aligned_cols=135 Identities=12% Similarity=0.056 Sum_probs=88.9
Q ss_pred hhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhh--
Q 011997 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG-- 130 (473)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~-- 130 (473)
..........+|.+. +++|.+..+ .+...++..+...+++++.|+++||+|||+.+.++..+..+......
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 334444556677665 567888877 88888888888889999999999999999988776654433332111
Q ss_pred --ccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHH-HHHHHHHHHHHhc
Q 011997 131 --LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLA 194 (473)
Q Consensus 131 --~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~ 194 (473)
..++....+..-.+.+.+.+...+ ...+++|.+|+|.|++++|+.+...+. .....|.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 330 LQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 122333222222222233333334 477889999999999999998765443 3445778777553
No 180
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=6.9e-10 Score=100.58 Aligned_cols=133 Identities=16% Similarity=0.225 Sum_probs=116.3
Q ss_pred hhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHH
Q 011997 58 SSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (473)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 136 (473)
+.+......+. +++|++..+ ..++.....+..+++++++|++.||+|.|+++..++++..+.++..-+.....
T Consensus 269 ~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~ 342 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGEL 342 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccH
Confidence 33333334444 599999999 99999999999999999999999999999999999999999988887777777
Q ss_pred HHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
.+.+.-.+.|...|.... ..++.++.+|+++-++.+|+++.....+..+||.+.+.+.+.
T Consensus 343 ~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 343 DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 777778899998887776 599999999999999999999999999999999999999884
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.17 E-value=1.8e-09 Score=102.81 Aligned_cols=124 Identities=12% Similarity=0.020 Sum_probs=98.8
Q ss_pred HHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH-HHHHHHHhhccccHHHHHHHH
Q 011997 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS-VVIFNTLFGLSVNFWMAVLTR 142 (473)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~r 142 (473)
.|.+.+++|.+..+ .+.....+.++..++.++.|++.||.+ |+.++.+..+ .....++....++.+.+.+..
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVA 312 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 47777888999888 999999999999999999999999964 4444444444 334344445567788888888
Q ss_pred HHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 143 ~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
++.|++.+...+. .+++.+..| +++++..+......++|..+||.++|++.+
T Consensus 313 ~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 313 IIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988887775 778888887 556777888888889999999999999998
No 182
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.16 E-value=5.2e-08 Score=89.83 Aligned_cols=330 Identities=14% Similarity=0.101 Sum_probs=175.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (473)
.+.+.-+-.+...+..+.+.++.+|+..+.=......++.++.++.+++++.+.=+++-++.+++.|..... ..+ ...
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 455666667777888888889999988665566677788889999999999998888989999988877665 444 445
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHh-hcccCcC
Q 011997 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLH 241 (473)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~ 241 (473)
+++ ..++-+..+.+.++++|+..=..+.+ . ..+.|........+.++..+.++ .+|+++.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~--------~-------g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~ 200 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT--------L-------GLSPRTTLLIMLVLPAIFLLSYFFLLPSPPT 200 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH--------h-------CcCHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 553 35666777777777777766544443 1 33445555555555544444433 4444332
Q ss_pred CCCCCCcchh-hhHH-HhhHhHHHhhhhhcccCCcccccc-ccchhHHHHHHHHHHHh-hhhhhhHHHHHhhcCccccCC
Q 011997 242 RHNDDDDSCD-VSYD-ALESASAEVKEEEGREATPKKSLL-KNWPLMSSIIVYCVFSL-HDMAYSEIFSLWANSPKKLGG 317 (473)
Q Consensus 242 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 317 (473)
+....+.+.+ ...+ ..+.+..+ ++.+...+...++-+ +-++....++-.++.++ -+...+...+.......
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~---- 275 (402)
T PF02487_consen 201 NRPYQESESEDEAEDDLLESETSE-SKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNS---- 275 (402)
T ss_pred cCCCcccCCCCccccccccccccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCcc----
Confidence 2211111110 0000 00000000 000011111111111 11222222222222222 22222333443322111
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (473)
..-...+..+....+.++.++++- ...++ |+++.+++.+...+..+.+.+-.+... ....+.+++..+.-|..+
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRS-S~~~~--rir~lwils~LQ~~nl~~~~l~s~~~f---ipsi~ivf~lif~eGLlG 349 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRS-SLPFF--RIRRLWILSLLQVINLVFLLLQSWYRF---IPSIWIVFVLIFYEGLLG 349 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhc-ceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHhh
Confidence 122344556666777777777654 22221 223333322222222222222222211 122233445555666777
Q ss_pred HHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 398 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
+..+...+..+.+..|+++|.-++|........|..++..++-++-.
T Consensus 350 Ga~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 350 GASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 77777777777777999999999999999888888888776655543
No 183
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.15 E-value=2.1e-10 Score=104.42 Aligned_cols=147 Identities=21% Similarity=0.312 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc----ccCCchhhH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII 116 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~~~ 116 (473)
+.++.+....+.-.++...-....|.+.++.|++... .+.+-....+...+.+|+.|..+| ||||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 5566666666666777777778888999999999887 777777777888899999999999 599988887
Q ss_pred HHH-HHHHHHHHHhhccccH-----------------HHHHHHHHHHhhhc-chhHhHHHHhhhhccccchhh-hhHHHH
Q 011997 117 MGT-ASVVIFNTLFGLSVNF-----------------WMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (473)
Q Consensus 117 ~~~-~~~~~~~~~~~~~~~~-----------------~~l~~~r~l~G~~~-g~~~~~~~~i~~~~~~~~r~~-~~~~~~ 176 (473)
... +...++.++..++.+. ..++++-.+.-++. -...|+.+++.|...++++.+ +.+.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 654 5555666666665433 23344444445543 456778999999998877777 999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 011997 177 TAWGIGLIIGPALGGFL 193 (473)
Q Consensus 177 ~~~~~g~~~~~~i~~~l 193 (473)
...++|+.+|..+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998887643
No 184
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.15 E-value=1.3e-09 Score=106.96 Aligned_cols=130 Identities=17% Similarity=0.136 Sum_probs=97.5
Q ss_pred hhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc--cc-H
Q 011997 59 SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VN-F 135 (473)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~-~ 135 (473)
......|.+.++.|.+..+ ..+......+...++.++.|+++||+|||++++.+..+.+++.++.+.. ++ .
T Consensus 289 ~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~ 362 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP 362 (479)
T ss_pred HHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcc
Confidence 3344567888888888776 6777777888889999999999999999999999999888887776542 11 1
Q ss_pred H-HHHHHHHHHhhhcch-hHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 136 W-MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 136 ~-~l~~~r~l~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
+ ....+-++.+.+.+. ..|. ..++.|.+|+++|++++++......+|..+++.+.+.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 363 GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1 222333444443332 3354 899999999999999999999999999998877766554
No 185
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.14 E-value=2.4e-09 Score=97.88 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHH---hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
+......+..++............+.+.+| +|.++.+ .+...+.+..+..++.+..+++.||+|+||++.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 334444445555444555666677777653 5888888 9999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..+..++.++....++...+ .+-++.|++.+...|. .+...+..|++ .+++.++. ....+|..+.|.+.|.+.+
T Consensus 214 ~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 214 NAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 888888777666655544333 3555788888888885 77777777753 45556665 5677899999999999998
No 186
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.12 E-value=2.1e-09 Score=91.58 Aligned_cols=146 Identities=18% Similarity=0.242 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
++.+...+++.+....-+...-| .+.+.||+++.+ .+.+.+....-.++.+++.|.++||+|++-..+.+..+
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 33333344444443333333333 467889999998 89999988888899999999999999999887776544
Q ss_pred HHH-HHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 122 VVI-FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 122 ~~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
..+ +-....++ ++.=.++..+.|+........ ...++.+.|+++.|++.+..+...++|..+.|++++.+.+.
T Consensus 340 ~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 340 LTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 433 33333332 222245667788887777764 77888899999999999999999999999999999999983
No 187
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.12 E-value=2.1e-09 Score=102.02 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=92.3
Q ss_pred HHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc-cccHHHHHHHHH
Q 011997 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (473)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 143 (473)
|.+.+.+|.++.+ .++..+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555668988888 999999999999999999999999999999999988888877765543 455566666666
Q ss_pred HHhhhcch-hHhHH-HHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 144 LLGSLNGL-LGPIK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 144 l~G~~~g~-~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.+++... ..+.. ....+..+++.++... .+....+|..+||.++|++.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHH
Confidence 66665433 33343 3444444555555443 466788999999999999987
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.12 E-value=8.4e-10 Score=105.25 Aligned_cols=129 Identities=12% Similarity=0.059 Sum_probs=105.2
Q ss_pred hhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc-ccCCchhhHHHHHHHHHHHHHhhccccHHHHH
Q 011997 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (473)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (473)
....|.+.++.+.++.+ .+++.+...++...+..+.+++.| |++.|+.+..+..+.+++.++.+.+++++.+.
T Consensus 228 ~~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34567777776556666 888888877776666666666665 56767777888888888888888888888888
Q ss_pred HHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+...+.|++.+...|. .+++.|..|+++|++.+++.+....+|..+||.++|++.+
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 8888888887777775 8899999999999999999999999999999999999988
No 189
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.12 E-value=2.9e-10 Score=107.00 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHH-HHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
++.+.+..++............|.+.+++|.+.++ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 44344444444555555667778777778988888 888887665 57789999999999999999999988888
Q ss_pred HHHHHHHhhcc-----------ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHH
Q 011997 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (473)
Q Consensus 122 ~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (473)
.+++..+..+. ++.+.+..+.++.+++.+...+. .+++.|.+|+++|++.+++.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 87776655442 45677888889999998888775 9999999999999999999876554
No 190
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.12 E-value=2.5e-10 Score=100.81 Aligned_cols=126 Identities=21% Similarity=0.289 Sum_probs=93.4
Q ss_pred HHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHH----HHHHHHHHHhhhcchhHhHHHHhhhhccccc
Q 011997 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW----MAVLTRFLLGSLNGLLGPIKAYACEIFREEH 167 (473)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~ 167 (473)
.+.-.-|.++.+++.||+|||+++..+.+++++..++...+.+.. +++.+|++. .|.+.+++.|..|.+|.+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi---sg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI---SGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---hchheEEEEecCcccchhh
Confidence 345577899999999999999999999999999988877654332 334455433 3445556889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhccc
Q 011997 168 QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (473)
Q Consensus 168 r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (473)
|+.+.|....+.-+|.++.|+++ ...+ -.-.++..+...+.++..+...++|-
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeeee
Confidence 99999999999999999999999 3332 11223444555556666666666663
No 191
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=1.8e-09 Score=103.34 Aligned_cols=149 Identities=14% Similarity=0.170 Sum_probs=99.4
Q ss_pred HHHHHHhcccccchhhhhhhhHHHHHHH-HHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh---hcc-ccHHHHH
Q 011997 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (473)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (473)
+.+.+++|.++++ .+++.+... ++..++.+++|++.||+|||+.+..+..+..+..+.. +.. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 898886654 5688999999999999999998887776666554333 343 4556666
Q ss_pred HHHHHH----hhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCc
Q 011997 140 LTRFLL----GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (473)
Q Consensus 140 ~~r~l~----G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (473)
+.-+++ |++.+...+. ..++.+.+|.+++ +..+...++|..+++.++|.+.+ +++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~----------------~~G 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE----------------AYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 555444 4444444443 6677777775554 45555567777767778999998 444
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccC
Q 011997 215 YFLPCLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (473)
|+..+...++++++.++.....+.+
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5555566666666655555444443
No 192
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=9.1e-10 Score=106.47 Aligned_cols=174 Identities=15% Similarity=0.225 Sum_probs=145.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC--CchhhHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTA 120 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~ 120 (473)
++.+.+...+..++.......+|.+.++.+.+..+ .+.+.++..+...++.++.|+++|+.. ++.+..++++
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll 373 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLL 373 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHH
Confidence 44566666777777778888889999999999999 999999999999999999999999988 5666777888
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 199 (473)
..+++.+.++++++++.+...-.+.|++.|..... ...+.|..+.++-..+.|+.....+++..+||++++++.+..++
T Consensus 374 ~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 374 IAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN 453 (509)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC
Confidence 88899999999999999999999999999998886 67889999999999999999999999999999999998884332
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcc
Q 011997 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (473)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (473)
|...+...++..++....++..|
T Consensus 454 ---------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 454 ---------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ---------------eeeehhhcChHHHHHHHHHHHhH
Confidence 33334555555555555555555
No 193
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.10 E-value=1.8e-07 Score=89.03 Aligned_cols=374 Identities=8% Similarity=0.091 Sum_probs=194.7
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccc-----cchhhhhhhhHHHHHHHHHHHHH-hhhhhhhhcccCCch
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKP 113 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~-~~~~G~l~dr~Grr~ 113 (473)
.++++...+..++-.+.+ ..+..+.+++..+. +. ..++-+...+...+. .++.+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y----~iLR~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNY----TILRDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 344554444444444443 33455566666532 33 788888877777666 899999999999999
Q ss_pred hhHHHHHHHHHHHHHhhcc----c---------------------------cHHHHHHHHHHHhhhcchhHh-H-HHHhh
Q 011997 114 VIIMGTASVVIFNTLFGLS----V---------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYAC 160 (473)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~i~ 160 (473)
++-+....+....+++++. + +.|..-+..+...+-...... . ..+.+
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988777776666665543 1 122333344445553334333 4 88999
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcc--h--hHHHHHHHHHHHHHHHHhhc
Q 011997 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY--F--LPCLCISLFAFGVTIAAFWL 236 (473)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~ 236 (473)
|.++.+|-.|..++...+.++|..+++.+..++.+.....+.. ...| . ....+.++..++.+.+..++
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~~~~~~~~~~~~~l 227 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPG--------VDGWHVSLKNLMVIVICSGLAIILLYWWV 227 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--------cChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887421111100 1122 1 12233333333334444444
Q ss_pred ccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccC
Q 011997 237 PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (473)
Q Consensus 237 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (473)
.+.....+...+.++ .+++++.+.....+.+.++|+|.++...+...++...........-... .+
T Consensus 228 ~~~~~~~~~~~~~~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v-----~~ 293 (472)
T TIGR00769 228 NRNVLTDPRSYNPAL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKL-----KA 293 (472)
T ss_pred HhcccCCccccchhh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH
Confidence 322211110000000 0000001111223556788888877766665555433222211111111 11
Q ss_pred CCCCChh----hHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHH---HHHHhhh-------hhH
Q 011997 317 GLNYSTQ----MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP---YIAMLSG-------FGL 382 (473)
Q Consensus 317 ~~~~~~~----~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~ 382 (473)
.+ -++. -.|......++..++.+++. +++-||.|-.....+..++..+....+. ....... ..+
T Consensus 294 ~~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~-~~l~~~~Gw~~~a~i~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~p 371 (472)
T TIGR00769 294 QY-PSPNEYSAFMGDFSTWTGVVSVTMMLLS-GNVIRKYGWLTAALITPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTP 371 (472)
T ss_pred HC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhccCh
Confidence 11 1222 24455566677777777755 7777777876665555554444221211 1110000 000
Q ss_pred -HHHHHHHH---HHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH-HHHHHHHhhhhhhhHHHHHhh
Q 011997 383 -AFLLNCAS---VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 383 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~g 447 (473)
.....+.. ...-..-....-..--++---.|+|.|.++-+.... +..+|-..|..+...+....+
T Consensus 372 l~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~~~~~ 441 (472)
T TIGR00769 372 LLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLLVIFG 441 (472)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 11111111 111111111122222222333588999999999975 456888888887666544433
No 194
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=1.4e-09 Score=98.53 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
++.+.+++.++.+.-+.-.++..+| .+.++|+.++.+ .|.+...+.+...+..+.+|+++||+|.+|++....
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f 291 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVF 291 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHH
Confidence 4455555555555555555666666 456789999998 999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhcc-------ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 120 ASVVIFNTLFGLS-------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 120 ~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
..++++..+..+. ++...+++.-+..+++.|.... +..++..++|+ +-+...|+.....++|...-|..-+
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g 370 (417)
T COG2223 292 VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFG 370 (417)
T ss_pred HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHH
Confidence 8888888777765 3444444434444444443333 35667777764 6788999999999999999998888
Q ss_pred Hhcc
Q 011997 192 FLAQ 195 (473)
Q Consensus 192 ~l~~ 195 (473)
...+
T Consensus 371 ~~~~ 374 (417)
T COG2223 371 VSLD 374 (417)
T ss_pred HHHH
Confidence 8887
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=1.7e-09 Score=106.38 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=115.4
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHH
Q 011997 47 WIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (473)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (473)
.+..++..+........+|.+.+ .+|.++.+ .++......++..++.++.|++.||+|||+.+..+..+.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Confidence 34444444444444556676654 47888888 999999999999999999999999999999999998888888
Q ss_pred HHHhhc----cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 126 NTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 126 ~~~~~~----~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+..+ ..+.+.+....++.|++.+...+ ......+..|+++|+++.++.+....+|..+|+.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 335 FYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877662 23566777778889999887654 46677788899999999999999999999999999988875
No 196
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.05 E-value=3.7e-09 Score=103.23 Aligned_cols=177 Identities=16% Similarity=0.179 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHH-HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhh----
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI---- 115 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~---- 115 (473)
+.++..++..+............+|.+. +++|.+..+ .++..++..++..++.++.|+++||+++|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~ 334 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTA 334 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 3444555666666666666667778665 557998888 99999999999999999999999998755322
Q ss_pred ----HHHHHHH--HHHHHHhhc-cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHH
Q 011997 116 ----IMGTASV--VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (473)
Q Consensus 116 ----~~~~~~~--~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 187 (473)
..+.... .+..+.... ..+....++.-.+.+.+.+...+. .....|..|+ .++...++.+....+|..++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 335 ARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111111122 234444444444445544444443 4455566664 899999999999999999999
Q ss_pred HHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcc
Q 011997 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (473)
Q Consensus 188 ~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (473)
.+.+.+.+. .+ ...|...+.+.++..++..+.....+
T Consensus 414 ~l~g~~~~~-------~~------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 414 TLAGNILSQ-------DS------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HhhheeeCC-------CC------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 999988761 11 12255555666655555544444433
No 197
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.05 E-value=1.3e-07 Score=88.73 Aligned_cols=336 Identities=15% Similarity=0.050 Sum_probs=198.8
Q ss_pred hhHH-HHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhh
Q 011997 84 AGYV-GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (473)
Q Consensus 84 ~g~~-~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 161 (473)
.|.. .++.+....+++++.+.+.|+.|.|+.+.++...+....+..-+-+ -+-++.+-.+.|+|.+..... ..+++|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhh
Confidence 3444 6777888899999999999999999999999999988877766544 667788889999999998886 889999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCC-Cccccc-ccccCCc---chhHHHHHHHHHHH--HHHHHh
Q 011997 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP-NLFSSE-SLFGKFP---YFLPCLCISLFAFG--VTIAAF 234 (473)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~-~~~gw~-~~~~~~~---~~~~~~~~~~~~~~--~~~~~~ 234 (473)
..++|.+.+..++.......+.++|..+-..+........ ...+-+ ..+ +.. .....+..+...+. .++...
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVF-EVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhc-chhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999988888888888766655543221110 011111 000 000 00111111111111 111112
Q ss_pred hcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccc
Q 011997 235 WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKK 314 (473)
Q Consensus 235 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (473)
+.|.+.... .++..+.. ..+..+...+++++++.+.+...++...+....+...+|..+....
T Consensus 209 ~~p~~~~~~-~~~~~~~~---------------~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~- 271 (461)
T KOG3098|consen 209 FLPSKDVVN-CKSSSETS---------------FSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR- 271 (461)
T ss_pred ecCccchhh-hhhhcccc---------------HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh-
Confidence 222211100 00000000 0011123345677788777766666655555555555554433221
Q ss_pred cCCCCC-ChhhHHHHHHHHHHHHHHHHHhhHHHHHH---hhhhhHHHHHHHHHHHHHHhHHHHHHHhhhh----------
Q 011997 315 LGGLNY-STQMVGEVLAITGFSLLVFQLSLYPFLER---ILGPIMVARIAGVLTIPLLTSYPYIAMLSGF---------- 380 (473)
Q Consensus 315 ~~~~~~-~~~~~g~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 380 (473)
..+. +....+......+++.++++.... .+.| ++|+++.+..+..+..+...+.......+.+
T Consensus 272 --~~~~n~~~~~ai~~~~~g~g~v~~g~~~~-~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~ 348 (461)
T KOG3098|consen 272 --KLGSNTTYLIAIYSIGIGLGEVIGGLDFS-ILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLL 348 (461)
T ss_pred --hccCcchhHHHHHHHHHhHHHHHHHHHHH-HHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccc
Confidence 1122 233345555666777777666333 3333 3467777777776666655544332221110
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 381 --GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
.......+..++.|..-.......+.+..... +++|.++.++.-.-+.++.+++-...+..
T Consensus 349 ~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 349 FTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred cccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 12334556666666777777778888888888 58899999998888888877765555444
No 198
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.05 E-value=1.4e-08 Score=88.04 Aligned_cols=132 Identities=14% Similarity=0.195 Sum_probs=104.5
Q ss_pred hhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc---
Q 011997 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--- 132 (473)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--- 132 (473)
..+.+...-|.+++.+|.+.+| ...+.....+|..+ .++.|.+.|++|+|.++.+|.+...++..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455666678999999999999 99999999999876 5889999999999999999999999988776542
Q ss_pred ----ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 133 ----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 133 ----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++|.+.+..++.|.+.+.... +.....+.|| ++||++.|+.-...+++..+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 4677877777777777665544 3555557787 589999999988888887776666555544
No 199
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.05 E-value=4.2e-09 Score=100.94 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=98.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHh--cccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchh-hHHHHH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGTA 120 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~-~~~~~~ 120 (473)
+...+..++...........+|.+.+++ +.+..+ .+...+...++..++.+++|+++||++||+. ......
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~ 318 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYL 318 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHH
Confidence 3344444445555666677888888875 456666 8889999999999999999999999998775 333443
Q ss_pred HHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
...++.++....++....+.+-.+.+++.....+. .....|.+|+++|++++|+.+....+|..++|.+.+.+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 319 FAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 44443332222333222222222223332222333 4555678999999999999999999999999999999988
No 200
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.04 E-value=1.2e-09 Score=102.58 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=111.5
Q ss_pred HHHHHHHhhhhhhhhhhhHHHH-HHHhccc-ccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (473)
+....+...+.........|.+ .+++|.+ ..+ .+...+...+...++.++.|++.||+|+|+..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 284 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLI 284 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3344444444555577777876 7889998 677 8999999999999999999999999999888888877777
Q ss_pred HHHHHhhccc---cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHH
Q 011997 124 IFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (473)
Q Consensus 124 ~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 187 (473)
+..+...... +....++.-++.|++.+...+. ..++.|..|+++|+++.++.+...++|..+||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 285 LGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7776665543 4577777888899988887775 99999999999999999999999999999987
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.04 E-value=6.9e-09 Score=100.12 Aligned_cols=150 Identities=18% Similarity=0.205 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
|.+..+....++............+++.++.--++.. .+.+..+..++..++.+++++++||+|+|+++..+..
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 4455566666777777777777777777664333355 7888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhccc--cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccc-------cchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 121 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
+.+++.++..+.+ |.+.+++.-++.|++.+...+. .++++|..+. ++.|...+..+....+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 299 LAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999999888875 9999999999999998887775 8899988863 4458888999999999999999999
Q ss_pred HHhccc
Q 011997 191 GFLAQP 196 (473)
Q Consensus 191 ~~l~~~ 196 (473)
+.+.+.
T Consensus 379 g~~l~~ 384 (428)
T PF13347_consen 379 GLLLAL 384 (428)
T ss_pred HHHHHH
Confidence 988763
No 202
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=3.3e-09 Score=102.99 Aligned_cols=147 Identities=16% Similarity=0.145 Sum_probs=107.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
+....+..++............|.+.+ .+|.+... .++......++..++.++++++.||+|+|+++.++..+
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~ 303 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALL 303 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 333444444444444444444554443 35654433 44444445677888999999999999999999999988
Q ss_pred HHHHHHHhhccc--cHHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc-------chhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 122 VVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 122 ~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
..++.+...+.+ +.+.+++..++.|+|.+...+. .++.+|..|.+ ++|...+..+....+|..+|+.+.+
T Consensus 304 ~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 304 GTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877776643 5677777788899998887775 88888888754 4588899999999999999999999
Q ss_pred Hhcc
Q 011997 192 FLAQ 195 (473)
Q Consensus 192 ~l~~ 195 (473)
.+.+
T Consensus 384 ~~l~ 387 (448)
T PRK09848 384 FILG 387 (448)
T ss_pred HHHH
Confidence 8876
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.03 E-value=7.3e-09 Score=98.82 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=84.0
Q ss_pred HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHh
Q 011997 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (473)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 146 (473)
+.+++|.++.+ .+.+.+...++..++.++.+++.||+|||+++..+..+..++.++..+.++.+..+..-.+.+
T Consensus 230 ~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (392)
T PRK10473 230 LMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLIC 303 (392)
T ss_pred HHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888887 899999999999999999999999999999999999988888887777666554444444444
Q ss_pred hhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 147 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 147 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.+...+. ....+..|.++|+ +.......++..+++.+++++.+
T Consensus 304 ~g~~~~~~~-~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 304 AGFSVGFGV-AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHhHH-HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 443332221 2223344544443 44444556777777777777776
No 204
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.02 E-value=6.9e-09 Score=98.78 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=93.2
Q ss_pred hhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc-----c
Q 011997 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----V 133 (473)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~ 133 (473)
.....|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.++.... +
T Consensus 225 ~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG 298 (385)
T ss_pred HHHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33444544 4578888888 9999999999999999999999999999999988887777776665543 2
Q ss_pred cHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHH-HHHHHHHHHH
Q 011997 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALG 190 (473)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~i~ 190 (473)
+...++...++.|++.+...+. .....|..| ++|+++.++.+.... .|...+|.++
T Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 299 SWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556677788887777665 777778776 679999998876655 4555555544
No 205
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.00 E-value=4.4e-08 Score=87.15 Aligned_cols=373 Identities=13% Similarity=0.040 Sum_probs=196.5
Q ss_pred CChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc-----ccCCc
Q 011997 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRK 112 (473)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-----r~Grr 112 (473)
..++++..+.+...+.+.-.+... .+|.+.+.-|.|.++ .+...-++ .. .---+.|.++.| |+|||
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccc
Confidence 345667777788888898888888 889998877777766 44332221 12 234578999999 99999
Q ss_pred hhhHH-HHHHHHHHHHHhhc-----------cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHH
Q 011997 113 PVIIM-GTASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAW 179 (473)
Q Consensus 113 ~~~~~-~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~ 179 (473)
|.-++ +..+.+......+. .++...+....++.-+..+....+ -.+.-.+..+++-+.+......+.
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~ 178 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQ 178 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHH
Confidence 87654 23333333333332 233333434445566666666554 666666677777766655555555
Q ss_pred HHHHHHHHHHHHHhcc--c----cccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhh
Q 011997 180 GIGLIIGPALGGFLAQ--P----AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS 253 (473)
Q Consensus 180 ~~g~~~~~~i~~~l~~--~----~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 253 (473)
+.|..++..+--.+.. + ..++|..-|.-..- . + ..+-+...++.-....+.+++++....++. +..
T Consensus 179 ~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~-g--y---~~fwg~~~~vat~Lv~~~kke~~~~~~~e~-~~~- 250 (510)
T KOG3574|consen 179 TAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLA-G--Y---LWFWGALFIVATTLVALLKKENDESVDEEL-ELG- 250 (510)
T ss_pred hhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhh-H--H---HHHHHHHHHHHHHHHHHhcCCCchhhhhhh-hcC-
Confidence 5555544433222211 0 11122111110000 0 0 011222233333333333333222211000 000
Q ss_pred HHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHH
Q 011997 254 YDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITG 333 (473)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 333 (473)
.++..+..+++++-|.+..........-..+.+-....++- .-+.|.+..+.+....+.-
T Consensus 251 --------------i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~Lk------Lle~Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 251 --------------IHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLK------LLEHGVPKEELALIAVPLV 310 (510)
T ss_pred --------------HHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchH------HHHcCCChhHheeeeeehh
Confidence 01111234556677777666655555444444443343332 2335888888777664444
Q ss_pred HHHHHHHHhhHHHHHHhh-----hhhHHHHHHHHHHHHHHhHHHHHHHhhh------hhHHHHHHHHHHHHHHHHHHHHH
Q 011997 334 FSLLVFQLSLYPFLERIL-----GPIMVARIAGVLTIPLLTSYPYIAMLSG------FGLAFLLNCASVVKNLLSVSIIT 402 (473)
Q Consensus 334 ~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 402 (473)
-..++.....+++..+.. -|....++....... ++..+...... ....+..+....+...+....+.
T Consensus 311 plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t--~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv 388 (510)
T KOG3574|consen 311 PLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQT--ALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFV 388 (510)
T ss_pred hHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHH--HHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHH
Confidence 445555444555544221 111112222222221 22222221111 12233333334455556666677
Q ss_pred HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 403 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 403 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
...+..+++.||...|+.+.+.|+..++|+---..+..++.|....+
T Consensus 389 ~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 389 SGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred HHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCcee
Confidence 77888899999999999999999999999999999999999887654
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.00 E-value=4.7e-09 Score=102.47 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+.+..+....++............+++.+....+... .+++.+...++..++.+++++++||+|+|+.++++..
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 3344444444444455555555555554444333444 6677777778889999999999999999999998887
Q ss_pred HHHHHHHHhhc-----cccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-------ccchhhhhHHHHHHHHHHHHHHH
Q 011997 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (473)
Q Consensus 121 ~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~ 187 (473)
+..++.+.... .++.+.+++.-++.|++.+...+. .++++|..+ +|+.|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 76666554432 345667777778888887777665 889999866 33445688889999999999999
Q ss_pred HHHHHhcc
Q 011997 188 ALGGFLAQ 195 (473)
Q Consensus 188 ~i~~~l~~ 195 (473)
.+.|++.+
T Consensus 385 ~i~g~~l~ 392 (473)
T PRK10429 385 FFIGVVLG 392 (473)
T ss_pred HHHHHHHH
Confidence 99999887
No 207
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.00 E-value=1.4e-08 Score=94.25 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=116.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (473)
.|.+.+..-+.-++...+..++.+|+|.|+.++++..++.+=..+++++++.+.+.+.+.+.|+-.+..... ..++++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999988877664 9999999
Q ss_pred ccccchhhhhHHH-HHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCc
Q 011997 163 FREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (473)
Q Consensus 163 ~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (473)
+|+|..++...+. +.+.++|..+.+.++|.+.| +.+++..+.+.+.+.+.. ++..+.+++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 9999988888885 78999999999999999999 555665555655555444 44555565544
Q ss_pred C
Q 011997 241 H 241 (473)
Q Consensus 241 ~ 241 (473)
+
T Consensus 405 ~ 405 (412)
T PF01306_consen 405 K 405 (412)
T ss_dssp S
T ss_pred c
Confidence 3
No 208
>PRK11043 putative transporter; Provisional
Probab=98.99 E-value=1.5e-08 Score=97.06 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=97.2
Q ss_pred hhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh---hc--ccc
Q 011997 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GL--SVN 134 (473)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~--~~~ 134 (473)
.....|.+.+++|.+..+ .++......++..++.+..+++.||+|+|+.+.......+++.+.. .. .++
T Consensus 222 ~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (401)
T PRK11043 222 WLTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS 295 (401)
T ss_pred HHHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 344567777888998888 8888888888999999999999999999987766555544443322 11 345
Q ss_pred HHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.+++...+.|++.+...+. .+...|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 555666667778877777775 666667665 689999999998888888888888888875
No 209
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.99 E-value=5.4e-09 Score=102.67 Aligned_cols=142 Identities=17% Similarity=0.131 Sum_probs=113.2
Q ss_pred HHHHHhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 011997 48 IIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (473)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (473)
+..+.............|.+ ++.+|.++.+ .|+......++..++.++.|++.||+|||+.+..+.++..++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSF 339 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 33333333333344455654 4557999988 9999999999999999999999999999999998888887776
Q ss_pred HHhhc---cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 127 TLFGL---SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 127 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
++... .++.+......++.|++.|...+ ....+.+..|+++++.+.+..+....+|..+|+.+.+.+.+
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 340 YGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543 34566667778899999888766 47788888999999999999999999999999999988865
No 210
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=1.6e-08 Score=110.29 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=113.3
Q ss_pred hhhhhhHHHH-HHHhccccc-chhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccH
Q 011997 58 SSLFPFLYFM-IKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (473)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
......+|.+ .+++|.+.. + .+++.+...++..+++++.|+++||+++|+++.++.++.+++.++..+..+.
T Consensus 249 ~~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1146)
T PRK08633 249 QLAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSL 322 (1146)
T ss_pred HHHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhH
Confidence 3344445544 566888887 7 9999999999999999999999999999999999988888888888888888
Q ss_pred HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+.+++..++.|++.+...+. .+++.+..|+++|++++++.+....+|.++++.+++.+..
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 323 ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999988877664 8999999999999999999999999999888888877653
No 211
>PRK10133 L-fucose transporter; Provisional
Probab=98.96 E-value=1.6e-08 Score=97.58 Aligned_cols=118 Identities=11% Similarity=0.025 Sum_probs=95.2
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhh
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 148 (473)
+++|.++.+ .++....+.++..++.++.|++.||+|||+++..+..+..+..++..+.++.. .+..-.+.|++
T Consensus 288 ~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg 360 (438)
T PRK10133 288 EIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAF 360 (438)
T ss_pred hcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHH
Confidence 467999988 99999999999999999999999999999999998888777766666665543 24556778999
Q ss_pred cchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 149 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 149 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+...|. .+...|..|+ +.+.+.++... ..+|..++|.+.|.+.+
T Consensus 361 ~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 361 MSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 8888885 8888887765 45667777754 44688888899999887
No 212
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.96 E-value=2.1e-08 Score=84.79 Aligned_cols=332 Identities=11% Similarity=0.056 Sum_probs=175.7
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 011997 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (473)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (473)
.+..++...+.....|..-.+.++++....+ +|.+....+-..++...+.|-++|+-|||+.-+.-++.+.+++
T Consensus 43 llVyslmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC 116 (454)
T KOG4332|consen 43 LLVYSLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC 116 (454)
T ss_pred HHHHHHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH
Confidence 3345556666777788888888899999888 8888877777788889999999999999997665555554443
Q ss_pred HHhhccccHHHHHHHHHHHhhhcchhHhH--HHHhhhhccccchhhhhHHH----H----HHHHHHHHHHHHHHHHhccc
Q 011997 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFREEHQALGLSTV----S----TAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~--~~~i~~~~~~~~r~~~~~~~----~----~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.-.++.|-.++++|++-|+..+....+ .-++.|.-.+ |+.-.-+. . ....+-.+++.+.+-.+.+
T Consensus 117 -iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek--r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd- 192 (454)
T KOG4332|consen 117 -ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK--RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVD- 192 (454)
T ss_pred -HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc--cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHH-
Confidence 3345789999999999999998887765 4467776633 33211111 1 1222223334444444444
Q ss_pred cccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHh-hcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCcc
Q 011997 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (473)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
++ ..+.-.||...+....+...+.+ -..|...++.++ ++..... ....
T Consensus 193 ------~~-------slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~----kdlltqf--------------~gaa 241 (454)
T KOG4332|consen 193 ------TF-------SLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSEN----KDLLTQF--------------KGAA 241 (454)
T ss_pred ------Hh-------ccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhh----HHHHHHh--------------hHhH
Confidence 11 22333444443333222222221 122222111111 1110000 1112
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhh-h
Q 011997 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-I 354 (473)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~-~ 354 (473)
+.+..++++..+-.+..++-...+.+ .++.+|....+ -...--|++++-.-+..++++-+..+.+.++-.+ .
T Consensus 242 ~aiaSD~ki~LLG~iqsLFE~smytF-----VFLWTPaLspn--~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve 314 (454)
T KOG4332|consen 242 RAIASDEKIALLGAIQSLFEGSMYTF-----VFLWTPALSPN--DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVE 314 (454)
T ss_pred HHHhcchHHHHHHHHHHHHhhhhhee-----eeeecccCCCC--cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccc
Confidence 23444555544443433333222222 33344432211 1122257777777778888877566666654222 2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH
Q 011997 355 MVARIAGVLTIPLLTSYPYIAML-SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (473)
..+.+.+.+....+.+....... ++......-.+..+..-...+..+|...-+-++..|++.|++.+-....
T Consensus 315 ~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 315 SYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheec
Confidence 23333333333333222222111 1111111123333333445566778888888888999999887655543
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=98.95 E-value=4.9e-09 Score=101.64 Aligned_cols=112 Identities=19% Similarity=0.260 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhc--cccHHHHHHHHHHHhhhcchhHhH-HHHhh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 160 (473)
.+.+.....++..++.+++++++||+|+|+.+..+..+..+..+...+ .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677888889999999999999999999887766654433222 357777888888999998888776 89999
Q ss_pred hhccc-------cchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
|..+. +..|...+.......+|..+|+.+++.+.+
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98862 334567788888999999999999999987
No 214
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.94 E-value=1.7e-08 Score=109.78 Aligned_cols=147 Identities=14% Similarity=0.092 Sum_probs=115.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (473)
++...+..++..+....+...+|.+.+ .+|.+..+ .|++.+.+.++..+++++.|+++|+.++++.+..+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 333333333344444445556676654 57888888 99999999999999999999999998888877776666
Q ss_pred HHHHHHHhhcc--------------------ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHH
Q 011997 122 VVIFNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG 180 (473)
Q Consensus 122 ~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (473)
.+++.+...+. ++.+.++++.++.|++.+...+ ..+++.+.+|+++||+++|..+....
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 66655544432 6778888888999998888776 49999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 011997 181 IGLIIGPALGGFLAQ 195 (473)
Q Consensus 181 ~g~~~~~~i~~~l~~ 195 (473)
+|..+++++.+.+.+
T Consensus 381 ~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 381 AFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998874
No 215
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.94 E-value=4.7e-08 Score=91.79 Aligned_cols=144 Identities=12% Similarity=0.049 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCc---hhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK---PVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr---~~~~~ 117 (473)
+.++.+++..++...........+|.+.++.|.+. + .+...++..+...++ .++++||.+|| +....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIR 261 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHH
Confidence 34455556666666666677788898888877654 3 455555555544444 46777776543 33332
Q ss_pred -HHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
...+.++.....+.+.+....++.-.+.|++.....+ ..++.+|.+|++.|+++.|+.+....+|..++|.+.+.+.
T Consensus 262 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 262 AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3333444444445555555545555666666555555 4889999999999999999999999999999999988776
No 216
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.94 E-value=5.4e-08 Score=92.65 Aligned_cols=122 Identities=13% Similarity=0.092 Sum_probs=99.8
Q ss_pred HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 011997 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (473)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 145 (473)
...+.+|.++.+ .|++.+...++..++++..+++.||+++|+++..+. ..++..++.++.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345568999888 999999999999999999999999999999888775 3444445556677777777788889
Q ss_pred hhhcchhHh-HHHHhhhhccccc-hhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 146 G~~~g~~~~-~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
|++.+...+ ..+.+.|..|++. ++++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998887665 4777788766654 799999999999999999999988664
No 217
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.93 E-value=7.3e-07 Score=88.97 Aligned_cols=128 Identities=16% Similarity=0.204 Sum_probs=100.6
Q ss_pred hhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHhhcccc------
Q 011997 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN------ 134 (473)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~------ 134 (473)
....++.+.+|.+.++ +..+...+....-+...++|+++|+ +||++.++++.++..++.++.+++..
T Consensus 9 iLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 9 ILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred HHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 3344556678888877 7777777777777889999999996 99999999999999999888776421
Q ss_pred --HHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc---chhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 135 --FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 135 --~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
....+++-.+..+|.|..-|+ .+...|.++++ +|...+.++..+.++|+.+++.+..++.+
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~ 149 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRG 149 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123556666777788888775 88999988754 46778888899999999999999998864
No 218
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.89 E-value=6.1e-08 Score=90.42 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=102.5
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
++.+-.+...|......-.+.++.-+ ...++.+++|+.+++.+++.....=+..+.+. ..++..+..-++.+.
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~f-fs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L------~n~W~vLPieilqgi 471 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYF-FSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL------QNPWMVLPIEILQGI 471 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHH-HHHHHHHHhcccceeeehhhHHHHHHHHHHHh------cCchheeeHHHHHHH
Confidence 44555666667666666666666666 55566777899999988888877777766554 233345556667777
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHH-HHHHHHHHhhhhhhhHHHHHhhhccccccccCC
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQKRLDASFLPGM 458 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 458 (473)
....++....++++...||+.++++.++.. ....+|-.+|++++|.+.+..+...+..++..+
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 778889999999999999999999999997 456899999999999999998887665544333
No 219
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=3.9e-08 Score=93.45 Aligned_cols=146 Identities=19% Similarity=0.135 Sum_probs=92.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
.+.+++..++.+.....+...+|.+.++ ..+... ......+..+...+..|++|+++||+|+||++.++.+..
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~ 326 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFM 326 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHH
Confidence 4445555555555555555566666544 222222 222234456777889999999999999999999988877
Q ss_pred HHHHHHhh-cc-----ccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccc---------------------cchhhhhHH
Q 011997 123 VIFNTLFG-LS-----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGLST 174 (473)
Q Consensus 123 ~~~~~~~~-~~-----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~---------------------~~r~~~~~~ 174 (473)
.++..... .. .+++.+.+.-+...++.|.... ...++.+++|+ ++-|.+.|+
T Consensus 327 ~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~ 406 (462)
T PRK15034 327 AIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGF 406 (462)
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHH
Confidence 77664322 11 2456665555444444454433 36666676764 145677888
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 011997 175 VSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 175 ~~~~~~~g~~~~~~i~~~l~~ 195 (473)
......+|..+-|.+-+...+
T Consensus 407 v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 407 ISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHcccchhhHHHHHHHH
Confidence 888888888888877777665
No 220
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.89 E-value=2.6e-08 Score=95.75 Aligned_cols=158 Identities=11% Similarity=0.018 Sum_probs=110.4
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhh-hhhHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIA 360 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~ 360 (473)
+.++..........+.+.....+++.|+... +|++..+++...........++.+ .++++.||+ |||+.+..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~l-igG~LaDRilGrrr~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTPI-LGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccCcHHHHHHH
Confidence 4455555555555666667777888876543 689999999999988888888877 667777777 999999988
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--hhhHHHHHHHHHHHHHHHhhhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.++..++..++.... . .... ......+...+.+...+...++..|.+|++ +|.++.++.+...++|+.++|.+
T Consensus 83 ~il~~lg~lll~~~~---~-~~~~-~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 83 ALLMAIGHVVLGASE---I-HPSF-LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHHHHhh---c-chhH-HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 888877765443211 0 1111 111111111222334466677889999875 79999999999999999999999
Q ss_pred hhHHHHHhhhcc
Q 011997 439 GGALFSWAQKRL 450 (473)
Q Consensus 439 ~g~l~~~~g~~~ 450 (473)
.|++.+..|.+.
T Consensus 158 ~g~L~~~~Gw~~ 169 (493)
T PRK15462 158 CGYAQEEYSWAM 169 (493)
T ss_pred HHHHHhhhChHH
Confidence 999988776443
No 221
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.88 E-value=2.1e-08 Score=97.57 Aligned_cols=161 Identities=8% Similarity=0.002 Sum_probs=115.1
Q ss_pred cccch-hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh-hhhhHH
Q 011997 279 LKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMV 356 (473)
Q Consensus 279 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 356 (473)
+++|+ ++......++..+.+.....+++.|+... .++|++..+++...+...++..++.+ .++++.|| +|||+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~---~~lg~s~~~ag~~~~~~~~~~~~~~~-~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ---AGLGFSQEQAFIIFGAYSALVYLLTS-VGWWFGDRVWGTKKT 81 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhcchHHH
Confidence 34444 34444455554566667777788876432 13689999999999999999999988 55566555 899999
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcch---hhHHHHHHHHHHHHHHH
Q 011997 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ---RGAANGIAMTGMSLFKA 433 (473)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~ 433 (473)
+..+..+..++..++.+.. ..+ .+.+...+.+.+.+...+....+..+.+|+++ |+++.++.+...++|..
T Consensus 82 l~~~~~~~~~g~~~~~~~~-----~~~-~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ 155 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSI-----YPD-LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF 155 (475)
T ss_pred HHHHHHHHHHHHHHHHhcc-----cHh-HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence 9999988888776665421 111 22223333444445556777788888887654 88899999999999999
Q ss_pred hhhhhhhHHHHHhhhc
Q 011997 434 AGPAGGGALFSWAQKR 449 (473)
Q Consensus 434 ~~~~~~g~l~~~~g~~ 449 (473)
+||.+.+++.++.+..
T Consensus 156 ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 156 ISPLLAGVIAENYGYH 171 (475)
T ss_pred HHHHHHHHHHHhcChH
Confidence 9999999999876643
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.87 E-value=3.3e-08 Score=96.84 Aligned_cols=165 Identities=8% Similarity=-0.080 Sum_probs=111.4
Q ss_pred ccccccccch-hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh-h
Q 011997 274 PKKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-L 351 (473)
Q Consensus 274 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~-~ 351 (473)
-..+.+|+|+ ++......++..+.......+.+.|+.. ++|++..+++............... .++++.|| +
T Consensus 12 ~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-----~lg~s~~~a~~~~~~~~~~~~~~~~-~~G~LaDr~~ 85 (500)
T PRK09584 12 VSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVK-----QLGMSEADSITLFSSFSALVYGLVA-IGGWLGDKVL 85 (500)
T ss_pred CChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcc
Confidence 3445666664 6666666666666666677777777643 3688888887777665544444334 56777787 5
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--hhhHHHHHHHHHHH
Q 011997 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMS 429 (473)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~ 429 (473)
|||+.+..+..+..++..++.+.. .....+.+...+.+.+.+...+....+..+.+|++ ++..+.++.+...+
T Consensus 86 G~r~~~~~g~~~~~ig~~l~~~~~-----~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 86 GTKRVIMLGAIVLAIGYALVAWSG-----HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSIN 160 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHH
Confidence 999999998888777766554421 11112223333344444555667777888888754 35568888899999
Q ss_pred HHHHhhhhhhhHHHHHhhhc
Q 011997 430 LFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 430 ~g~~~~~~~~g~l~~~~g~~ 449 (473)
+|..++|.+.|++.++.|.+
T Consensus 161 iG~~~gp~i~g~l~~~~g~~ 180 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHH
Confidence 99999999999999987643
No 223
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.86 E-value=7.3e-08 Score=91.44 Aligned_cols=128 Identities=18% Similarity=0.200 Sum_probs=85.4
Q ss_pred hhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhh---c-
Q 011997 57 ISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L- 131 (473)
Q Consensus 57 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~---~- 131 (473)
........|. +.+++|.++.+ .++..+...++..++.++.|++.||+|||+.+..+..+..+..+... .
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344443 45668888888 99999999999999999999999999999999888766544333222 1
Q ss_pred cccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHH-HHHHHHHHHHHHHH
Q 011997 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGG 191 (473)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~ 191 (473)
..+.+.+.++-.+.+.+.+...+ ....+.|..| ++|+++.+..+. ...+|..+++.+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 284 DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23445544444444444444444 3556677666 789999888754 34566666666543
No 224
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.83 E-value=1.7e-07 Score=86.20 Aligned_cols=143 Identities=30% Similarity=0.476 Sum_probs=117.9
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHhcccc--cchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 47 WIIVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
....+....+.....+..+.+..+++.+. .+ .++..+.+.++..++.++.|.++||+|||+.+..+.....+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 81 (338)
T COG0477 8 ALAALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLL 81 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHH
Confidence 33344444666677777888888877766 35 89999999999999999999999999999888888876666
Q ss_pred HHHHhhcccc--HHHHHHHHHHHhhhcchhHhH-HHHhhhhccc-cchhhhhHHHHH-HHHHHHHHHHHHHHHhcc
Q 011997 125 FNTLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 125 ~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~ 195 (473)
+.+..++..+ .+.+++.|+++|++.+...+. .+++.|+.|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 82 GTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777665 899999999999998887775 9999999998 788999998887 688899999988888876
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.83 E-value=2.3e-08 Score=97.13 Aligned_cols=156 Identities=9% Similarity=-0.040 Sum_probs=119.1
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc----------ccHHHH
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l 138 (473)
+.+|.++.+ .|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+..
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999998 9999999999999999999999999999999999999999887664321 333445
Q ss_pred HHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchh
Q 011997 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (473)
Q Consensus 139 ~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (473)
...-++.+++.+.... ...++.+..|++++++..++.+...++|..+++.+++.+.+ ++|-..-..+.-|.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~-------~~g~~~~~~~~~~~- 426 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME-------TIGITCDNSNNLWL- 426 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCcccccchHH-
Confidence 5566788888777655 59999999999999999999999999999999999999998 44422111022222
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 011997 218 PCLCISLFAFGVTIAAFWLPE 238 (473)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e 238 (473)
...+..+..++.+...+++|+
T Consensus 427 ~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 427 LILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 333444444555555567886
No 226
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=1.7e-07 Score=88.56 Aligned_cols=151 Identities=13% Similarity=0.043 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHH
Q 011997 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (473)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
++...+.+++.......+..+.|.+ ..+++|+++.+.++..+...++..++++ ..+++.||+|||+.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQM-----IKDDLGLSTAQLGNLVAVPVLAGAVLRI-ILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHH-----HHHHhCCCHHHhhHhhHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 3444445555444444454455533 2344799999999999999999999998 555666678999999888888
Q ss_pred HHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
..++..+..+... ....+.+..++.+... ...+....+..+..|+++|+++.++.....++|..+++.+.+.+.
T Consensus 77 ~~i~~~~~~~~~~-----~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 77 LAIPCLWAGLAVQ-----SYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHhh-----hHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8777766655321 1222333334444443 334556678889999999999999999889999999999888887
Q ss_pred HHh
Q 011997 444 SWA 446 (473)
Q Consensus 444 ~~~ 446 (473)
+..
T Consensus 151 ~~~ 153 (366)
T TIGR00886 151 GSL 153 (366)
T ss_pred HHH
Confidence 653
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.2e-07 Score=89.06 Aligned_cols=150 Identities=12% Similarity=0.207 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (473)
+.+..+++..++.....++......++.+. +|-++.+ ..+.......+..++.+++.++++|+|+|+++.++.
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 334445555666666666666666555432 3444444 666777777777888999999999999999999999
Q ss_pred HHHHHHHHHhhccc--cHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-------ccchhhhhHHHHHHHHHHHHHHHHH
Q 011997 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPAL 189 (473)
Q Consensus 120 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i 189 (473)
++..++.++..+.+ +.+.+++..++.+++.+...+. .++++|..+ +|.-|...+......=+|..++..+
T Consensus 310 ~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999998888765 7888889999999998888876 888888764 2344677777888888999999988
Q ss_pred HHHhccc
Q 011997 190 GGFLAQP 196 (473)
Q Consensus 190 ~~~l~~~ 196 (473)
.++....
T Consensus 390 ~g~~L~~ 396 (467)
T COG2211 390 PGWILGA 396 (467)
T ss_pred HHHHHHH
Confidence 8888873
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.75 E-value=1.5e-07 Score=91.82 Aligned_cols=156 Identities=7% Similarity=-0.075 Sum_probs=112.1
Q ss_pred chhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh-hhhhHHHHHH
Q 011997 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIA 360 (473)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 360 (473)
+.++......+.-.+.+.....+++.|+.. ++|++..+++...........+..+ .++++.|| +|||+.+..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~-----~lg~~~~~a~~i~~~~~~~~~~~~~-~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVK-----QLGFSQEQAFITFGAFAALVYGLIS-IGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHh-hHHHhhhhccchHHHHHHH
Confidence 344555555555556666666677777643 3688888888887776666666655 66777776 9999999999
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--hhhHHHHHHHHHHHHHHHhhhhh
Q 011997 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
.++..++.....+... ....+.+...+.+.+.+...+...+++.|.+|++ +|+++.++.....++|..+||.+
T Consensus 88 ~~~~~~g~~~~~~~~~-----~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 88 AIVLAIGYFMTGMSLL-----KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHHhcc-----chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 9998888776655321 1111222333344555666677788999999877 45889999999999999999999
Q ss_pred hhHHHHHhhh
Q 011997 439 GGALFSWAQK 448 (473)
Q Consensus 439 ~g~l~~~~g~ 448 (473)
+|++.++.|.
T Consensus 163 ~g~l~~~~gw 172 (489)
T PRK10207 163 APVIADKFGY 172 (489)
T ss_pred HHHHHHhhCh
Confidence 9999998763
No 229
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.74 E-value=1.9e-07 Score=89.12 Aligned_cols=126 Identities=21% Similarity=0.067 Sum_probs=94.1
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
+++|.++.+.+...+...++..+++++ .+.+.||+|||+.+..+.....+......... .. ..+.+..++.+.
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~~-~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~-~~l~~~~~~~g~ 108 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQLF-YGPLSDRVGRRPVILVGMSIFILGTLVALFAH-----SL-TVLIAASAIQGL 108 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHh-hhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc-----cH-HHHHHHHHHHHh
Confidence 457999999999999999999999984 55566678999988888777666665544321 12 223333444444
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhh
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 448 (473)
+.....+....+..+..++++++++.+..+....++..++|.+.+.+.+..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 44445566667778888989999999999999999999999999999886553
No 230
>PRK11462 putative transporter; Provisional
Probab=98.72 E-value=2.5e-07 Score=89.83 Aligned_cols=141 Identities=12% Similarity=0.144 Sum_probs=91.2
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 011997 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (473)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~ 128 (473)
..++.............++.+...-++.. .+.+...+.++..++.+++++++||+|+|+++..+..+..+..++
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~~~~------~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGTPEV------FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444333333 566777888888999999999999999999887655544443333
Q ss_pred hhccc--cHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-------ccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 129 FGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 129 ~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
..+.+ +...+++.-++.|++.+...+. .++++|..+ +++.+..++.......+|..+++.+++.+.+
T Consensus 310 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 310 MFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 2334445556677776665554 677777766 3333555577678889999999999999887
No 231
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.71 E-value=9.3e-07 Score=84.51 Aligned_cols=152 Identities=6% Similarity=-0.131 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHH
Q 011997 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (473)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
+......++.+.+.........|.+ .+++|.+..+.|...+...++..++++ ..+++.||+|||+.+..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~------~~~~~~s~~~~g~l~s~~~~g~~i~~~-~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF------QQAFTLTAFQAALVQSAFYGGYFIMAI-PAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 3444455555554443333444433 345799999999999999999999999 556677788999999999988
Q ss_pred HHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
..++..++...... ..+..+.+..++.+.+.....+....+..+..|+++|++..++.+....+|..++|.+.+.+.
T Consensus 78 ~~~g~~l~~~~~~~---~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 78 YALGAFLFWPAAEI---MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHhh---ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877665433211 123334445555666666777777888888889999999999999999999999999999887
Q ss_pred HH
Q 011997 444 SW 445 (473)
Q Consensus 444 ~~ 445 (473)
..
T Consensus 155 ~~ 156 (410)
T TIGR00885 155 LS 156 (410)
T ss_pred hc
Confidence 44
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.70 E-value=2.9e-07 Score=88.26 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=96.0
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
++++.+..+.+...+...++..++++ ..+.+.||+|||+++..+..+..++..+..... .. ..+.+.-++.+.
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~-~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-----~~-~~l~~~r~l~Gi 116 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQW-LLGPLSDRIGRRPVLITGALIFTLACAATLFTT-----SM-TQFLIARFIQGT 116 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-hhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC-----CH-HHHHHHHHHHHH
Confidence 45788999999999999999999988 566777788999999888777776665554421 22 223334444444
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 449 (473)
+.....+.......|.+|+++++++.++.+....++..++|.+++.+.++.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 444445556677888899999999999999999999999999999998875543
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.66 E-value=1.6e-07 Score=87.71 Aligned_cols=152 Identities=21% Similarity=0.341 Sum_probs=129.8
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (473)
..+..++.++....+...+-.-.+|.+..+.- .|.....-..+-.+.-++.+++..|+|+-+++..++.+..+=
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGR 449 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHH
Confidence 34455556666677777777778898877766 787777888888899999999999999999999999999999
Q ss_pred HHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHH-HHHHHHHHHHHHHHHHHhccccccCCCc
Q 011997 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNL 203 (473)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 203 (473)
.+.....+|.|+.+..-+++|+..+..+.+ .+|+++..||+-|..+.++. ....++|-.+|.++||.+.+ .
T Consensus 450 f~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~-------~ 522 (618)
T KOG3762|consen 450 FLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE-------R 522 (618)
T ss_pred HHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe-------e
Confidence 999999999999999999999998887775 99999999999999999988 56778999999999999998 5
Q ss_pred ccccccc
Q 011997 204 FSSESLF 210 (473)
Q Consensus 204 ~gw~~~~ 210 (473)
+|-|..|
T Consensus 523 fg~~ttf 529 (618)
T KOG3762|consen 523 FGARTTF 529 (618)
T ss_pred ehhHHHH
Confidence 5555544
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.65 E-value=2.1e-06 Score=76.71 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=117.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHHHHH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTAS 121 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~ 121 (473)
.+.+.+..-+.....++....+|.+..|-|.|..+ .|++.+...+.....++....+++| -++|+..+....+
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 44455555566777788888999999999999999 9999999999999999999999996 4577777778888
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc-ccchhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 011997 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (473)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 196 (473)
+.++.+.+.+.+.-..+.- -++.|+|.|...|. ..++.+..+ +++-++..++.+....+=..+||.+.|++-|.
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa 359 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA 359 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh
Confidence 8888887777665433333 48999998887774 888877665 45556666777888888889999999999984
No 235
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=3.7e-07 Score=87.44 Aligned_cols=179 Identities=15% Similarity=0.265 Sum_probs=118.0
Q ss_pred CCCChHHH------HHHHHHHHHhhhhhhhhhhhHHHHHH-HhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc
Q 011997 36 SGLPITEL------FSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR 108 (473)
Q Consensus 36 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr 108 (473)
.+.|++++ +.+++..+........+...+|.+.+ -+|.+..+ .|++.++..+...+..+++|.++||
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554 46788888888888888899997765 48999988 9999999999999999999999998
Q ss_pred cCCc--------hhh-HHHHHHHHHHHHHhhcccc--HHHHHHHHHH-HhhhcchhHh-HHHHhhhhccccchhhhhHHH
Q 011997 109 YGRK--------PVI-IMGTASVVIFNTLFGLSVN--FWMAVLTRFL-LGSLNGLLGP-IKAYACEIFREEHQALGLSTV 175 (473)
Q Consensus 109 ~Grr--------~~~-~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l-~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~ 175 (473)
.-+| |.+ .++....++..+..++.++ .+.-+++..+ .++ .|...+ .+.-..|. .+++-+..+++.
T Consensus 321 l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~-apq~a~~l~g~~ 398 (466)
T KOG2532|consen 321 LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDI-APQHAGFVMGII 398 (466)
T ss_pred HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhc-cchHHHHHHHHH
Confidence 7652 222 2344444555555555542 2112222211 222 222222 12222233 457789999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh
Q 011997 176 STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (473)
Q Consensus 176 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (473)
+....+...++|.+.+.+.+ .+ . +..|+..|.+.++..++.-+...+
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~-~~---t---------~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVT-DN---T---------REEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHheeeEeC-CC---C---------HHHHHHHHHHHHHHHHHhchheeE
Confidence 99999999999999999985 11 0 345666667777666665443333
No 236
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.63 E-value=1.3e-06 Score=82.08 Aligned_cols=121 Identities=13% Similarity=0.049 Sum_probs=100.9
Q ss_pred cCCCCCChhh-HHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHH
Q 011997 315 LGGLNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (473)
Q Consensus 315 ~~~~~~~~~~-~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (473)
.+++|++..+ .|.+......+..+..+ .++++.||+|.|+++..+.+...+..++.++.. ....+.+.-++.
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~------Sl~~L~i~R~ll 125 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT------SVWHMQLMEVFY 125 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 3467999999 99999999999999988 677788888999999999888888887777643 233455555666
Q ss_pred HHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 394 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
|.+.+... ....++.+.+|+++|+++.|+.+....+|.++++.+++.+.
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666 88888899999999999999999999999999999999943
No 237
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.62 E-value=1.6e-07 Score=84.42 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=117.1
Q ss_pred HHhhhhhhhhhhhHHH-HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC--CchhhHHHHHHHHHHHH
Q 011997 51 LCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNT 127 (473)
Q Consensus 51 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~~~~~ 127 (473)
..........-|.++. +.+++..+..+ .|...--..+.+.++..+.|.++||++ |-..-..+++..++.+.
T Consensus 280 ~~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 280 TFSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhc
Confidence 3445556667777776 45667755546 888888888999999999999999999 54444556677777777
Q ss_pred HhhccccHHHHHHHHHHHhhhcchhHh----HHHHhhhhcccc---chhhhhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 011997 128 LFGLSVNFWMAVLTRFLLGSLNGLLGP----IKAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (473)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~----~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 200 (473)
...+++++.++.+-++..|++.+.... ...++.|.-..+ .-|...++...++++|..+||.++|.+.+
T Consensus 354 ~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~----- 428 (464)
T KOG3764|consen 354 PIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE----- 428 (464)
T ss_pred hhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee-----
Confidence 788899999999999888887666544 333444443333 55788899999999999999999999998
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHH
Q 011997 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (473)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (473)
++++++...+.++..++..
T Consensus 429 -----------~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 429 -----------AIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred -----------ehhHHHHHHHHHHHHHHHH
Confidence 6666666566666655543
No 238
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.61 E-value=4.7e-08 Score=89.47 Aligned_cols=193 Identities=14% Similarity=0.021 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhh--hhhhhHHHHHHH-HHHHHHhhhhhhhhcccCCchhhHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDI--GSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
+.++..+...|+..+..+..+.....+.++.+..+++.+. .........+.. .++..+..+...+.|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 3344556666666667777777788888888877665222 111222222222 3334477788899999999999999
Q ss_pred HHHHHHHHHHHhhcccc----HHHHHHHHHHHhhh--cchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 011997 118 GTASVVIFNTLFGLSVN----FWMAVLTRFLLGSL--NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (473)
Q Consensus 118 ~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~--~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 191 (473)
+.+++.+..+..+...| -..+++...+..+. .|.......+-+|.+|.+-|+...|+...+.-+|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999998888765 22333333333332 1222223556789999999999999999999999999998888
Q ss_pred HhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCC
Q 011997 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (473)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (473)
++.+.. +|...| .+..+++...+.++..+..+++||+..+..
T Consensus 464 ~~t~~~--yp~~~g---------~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l 505 (538)
T KOG0252|consen 464 YLTDHN--YPPNIG---------VRNVFIILAGCMLLGILFTLLIPETKGKSL 505 (538)
T ss_pred Hhhhcc--CCcccc---------chHHHHHHHHHHHHhHheeEEeecccccCH
Confidence 877622 332333 344456777777777777888998876543
No 239
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.60 E-value=1.6e-07 Score=65.52 Aligned_cols=81 Identities=16% Similarity=0.271 Sum_probs=75.1
Q ss_pred hhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc
Q 011997 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (473)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 132 (473)
.++++..+.|.+|.+++|.++|.++ .|++.+..++||.+|++...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999 9999999999999999999999999888999999999999999999999
Q ss_pred ccHHHHH
Q 011997 133 VNFWMAV 139 (473)
Q Consensus 133 ~~~~~l~ 139 (473)
++++.+.
T Consensus 78 ~~~~~w~ 84 (85)
T PF06779_consen 78 HSFWLWS 84 (85)
T ss_pred hchHHHh
Confidence 8887653
No 240
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.58 E-value=1.7e-07 Score=74.88 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011997 332 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 411 (473)
Q Consensus 332 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..++..++++ ..+++.||.+||+....+.....+......... ..+ ......++.+.......+....+..|.
T Consensus 7 ~~~~~~~~~~-~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 7 YALGQLIYSP-LSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-----NIT-VLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred ehhHHHHHHh-hHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-----cHH-HHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3556667777 445566677999888877776666655544321 222 233344455556666778888899999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhh
Q 011997 412 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 412 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 448 (473)
.|+++|+++.++.+....++..++|.+.+.+.+..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch
Confidence 9999999999999999999999999999999876553
No 241
>PTZ00207 hypothetical protein; Provisional
Probab=98.52 E-value=3.2e-06 Score=82.98 Aligned_cols=128 Identities=17% Similarity=0.075 Sum_probs=85.4
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHH
Q 011997 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (473)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (473)
..+++|++..+.+.+.... ......++ ..+++.||+|+|+++.++.++..++.++.++.....-....+.+.+...+.
T Consensus 53 L~~~lgls~~~l~~i~svg-~~~g~~~l-p~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~ 130 (591)
T PTZ00207 53 MQARYNLTQRDLSTITTVG-IAVGYFLL-PYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLM 130 (591)
T ss_pred HHHHhCcCHHHHHHHHHHH-HHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHH
Confidence 3456799999999887663 33334444 457778889999999999999888887776642111001222233333444
Q ss_pred HHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 394 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
+.+.....+.......+.+| ++||++.|+......+|+++.+.+...+++
T Consensus 131 G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 131 TLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555666677776 789999999999999999875555555543
No 242
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.51 E-value=3.8e-05 Score=71.84 Aligned_cols=386 Identities=13% Similarity=0.077 Sum_probs=190.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHH--hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc-----ccCCchhhH
Q 011997 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVII 116 (473)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-----r~Grr~~~~ 116 (473)
.++.+.+++.+.-.+.....+|.+.++ -+.+.+| .+...-+ ...+ -.-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q------~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQ------QAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhH------heeeeee-echh-HHHHhhhhhhhhhcccccCCcchhh
Confidence 345666778888777776778888887 6777766 4332211 1111 12456666666 899999876
Q ss_pred HHH-HHHHHHHHHhhccc----------------------cH--HHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhh
Q 011997 117 MGT-ASVVIFNTLFGLSV----------------------NF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQAL 170 (473)
Q Consensus 117 ~~~-~~~~~~~~~~~~~~----------------------~~--~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~ 170 (473)
+-. .+.++..+..+... +. ..+....++.-+-.+.... +-.+.-.+..+++++.
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcch
Confidence 642 33333333322211 11 1122222233333333333 2444444556677776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccc--c----ccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCC
Q 011997 171 GLSTVSTAWGIGLIIGPALGGFLAQP--A----EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (473)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~i~~~l~~~--~----~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (473)
+..-...+.+.|..++..+--.+.+. . .+.|.-.|.-. .+=.+- ..+.+..++...+.++-+|.+....
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvt----l~~yl~-fwg~~~l~~T~~v~~~k~E~~~~~~ 229 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVT----LSGYLK-FWGWVFLIVTILVAFFKKEKPHSES 229 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeee----HHHHHH-HHHHHHHHHHHHHheEeeccccccc
Confidence 66555555555555554443333321 0 01111111111 011111 1122222223344444555442221
Q ss_pred CCC-c--c-hhhhHHH----hhHhH---HHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCcc
Q 011997 245 DDD-D--S-CDVSYDA----LESAS---AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (473)
Q Consensus 245 ~~~-~--~-~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (473)
..+ + + .+...++ .++.. .++....++.-....+++|-|++..+.+.....-..+.+-.....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~L------ 303 (544)
T PF13000_consen 230 LPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSL------ 303 (544)
T ss_pred CccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHH------
Confidence 110 0 0 0000000 00000 0000111222334556778888888877776665554444333332
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhh--------------------------hHHHHHHHHHHHHH
Q 011997 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP--------------------------IMVARIAGVLTIPL 367 (473)
Q Consensus 314 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~ 367 (473)
..-+.|++-++.+....+..=..++.....+++...+..- .+....+...-.+.
T Consensus 304 KLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~ 383 (544)
T PF13000_consen 304 KLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVA 383 (544)
T ss_pred HHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHH
Confidence 2233588888887776665555666656566665433110 01111111111111
Q ss_pred HhHHHH-HHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 368 LTSYPY-IAMLS-----GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 368 ~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
.++... ....+ +......+++..++..+.....+....++-+++.||..-|+.+.+.|++.++|+.--..+.=+
T Consensus 384 a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~ 463 (544)
T PF13000_consen 384 ALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLW 463 (544)
T ss_pred HHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHH
Confidence 111000 00011 122344455555666666777778888999999999999999999999999999988888888
Q ss_pred HHHHhhh
Q 011997 442 LFSWAQK 448 (473)
Q Consensus 442 l~~~~g~ 448 (473)
+.|....
T Consensus 464 lVD~fT~ 470 (544)
T PF13000_consen 464 LVDYFTV 470 (544)
T ss_pred Hhhhccc
Confidence 8887643
No 243
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.51 E-value=5.7e-06 Score=79.44 Aligned_cols=186 Identities=16% Similarity=0.051 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHH-H-Hhcccccchh---hh-hhhhHHHHHHHHHHHHHhhhhhhhhcccCC-chh
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMI-K-DFQIAKREED---IG-SYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPV 114 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~---~~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~ 114 (473)
.+..+++..++..++...+....+.+. + -|+.++.+++ .+ -...+....+.+...+.+++.-++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 345677777777777665555554443 2 3444332211 01 002333444455555777788889999995 777
Q ss_pred hHHHHHHHHHHHHHhhcccc---------------------HHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc--chhh
Q 011997 115 IIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQAL 170 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~--~r~~ 170 (473)
..++.++.+++.....+.++ .+..++.-.+.|+..+....+ ++++++..+++ +.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 78898888888777665332 366777778899988887777 99999999954 5599
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHH-HHHHhhcccCcC
Q 011997 171 GLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLH 241 (473)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 241 (473)
.+|+.+.+..+.+++..+..|.+.+ .+|-+.. ..+.+.++..++. +...+.+|++++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~-------~~g~~~~-------~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQ-------LFGGGNL-------PAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH-------HcCCCCe-------eHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999988888665 3332222 2334555555554 455566776543
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.50 E-value=8.9e-10 Score=107.25 Aligned_cols=163 Identities=18% Similarity=0.275 Sum_probs=100.2
Q ss_pred hhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhh--c---c
Q 011997 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L---S 132 (473)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~--~---~ 132 (473)
.......+.+.++.+.+... . ...+ ..+...++.++...+.||+|||++++.+..+.+++.+..+ . .
T Consensus 270 ~~~~~~~~~i~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~ 341 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNSF-L----ATLI---LGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGV 341 (451)
T ss_pred cccccccccccccccccccc-c----cccc---ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33444456666666666541 0 2222 2233456667777999999999999999988888877664 1 1
Q ss_pred cc----HHHHHHHHHHHhhh-cchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc
Q 011997 133 VN----FWMAVLTRFLLGSL-NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (473)
Q Consensus 133 ~~----~~~l~~~r~l~G~~-~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw 206 (473)
++ -...++.-.+...+ .....+. ..+.+|.+|.+.|.++.++......++..++|.+...+.+ ..+
T Consensus 342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~-------~~~- 413 (451)
T PF00083_consen 342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN-------NLG- 413 (451)
T ss_pred ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccc-
Confidence 11 11112222222222 2123344 6888999999999999999988888888888888777665 121
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCC
Q 011997 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH 243 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 243 (473)
.+.......++..+..++..+++||++.+.
T Consensus 414 -------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 414 -------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred -------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 011222333344444456678899987543
No 245
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.48 E-value=4.6e-06 Score=66.70 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc
Q 011997 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (473)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (473)
.++......+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-.+.|++.+...++ ..++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 455666678888999999999999999999999988666554 4567888999999999999999887 88999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 167 HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
+|++..++.......+.++|.++.-.+.
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888888887765554
No 246
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.47 E-value=3e-06 Score=76.94 Aligned_cols=147 Identities=16% Similarity=0.124 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
.+.+..-.++.++...........++.+.+| .|.++.+ .....+.+..+.++|.++.-++..|+...|.+.+.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~ 308 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFY 308 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3455556667777777777788888888877 7778887 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++..+-++..+++++...+. +-++.|+..+...|. .+...+..| +.....|..-.+..+|+++-|.+.|++.|
T Consensus 309 a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 309 ALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHH
Confidence 988888888888888865544 446778888888775 888888888 33334455556677899999999999999
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.46 E-value=6e-07 Score=62.32 Aligned_cols=71 Identities=23% Similarity=0.529 Sum_probs=61.4
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (473)
+-...++.....+...|.+|.+.++.|.+..| .|.+.++..+...++++++|.++||++|++..+....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666777788889999999999999999 999999999999999999999999999998887765543
No 248
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.46 E-value=3.1e-07 Score=84.49 Aligned_cols=148 Identities=11% Similarity=0.002 Sum_probs=118.4
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
+.+|.++...|++.....+...+.++ +.+.+.||++|++++.+|..+-.++.++..+. .+.+.+.+.=.+.+.
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sP-l~gyLadryNR~~v~~vG~~iW~~Av~~~~fs------~~Fwq~~l~R~~vGi 133 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASP-LFGYLADRYNRKRVIAVGIFIWTLAVFASGFS------NHFWQVLLCRGFVGI 133 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHH-HHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH------HHHHHHHHHHHHhcc
Confidence 44789999999999999999999999 66777888899999999998888887776664 334445555566778
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccccccccCCchhhhhhhhhhh
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGMMPKKTLIISLML 470 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 470 (473)
+.....|...+++++.+|.++|+++.++.+.....|..+|-..++.+.++.+..+..+...+...+++.++..++
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhh
Confidence 888899999999999999999999999999999999999999999999888865544444444444444444333
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.43 E-value=6.7e-06 Score=75.31 Aligned_cols=171 Identities=18% Similarity=0.131 Sum_probs=127.1
Q ss_pred HhhhhhhhhhhhHHHH-HHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc-ccCCchhhHHHHHHHHHHHHHh
Q 011997 52 CTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLF 129 (473)
Q Consensus 52 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~~~~~~~ 129 (473)
+..+..++.-.++-++ .+-||++..| ...++.....|..++-...|++.. |.++|+.-.+++....++..+.
T Consensus 219 l~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 219 LGTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 3344444445555333 4668999999 888999999999999999998877 6788888888887777766554
Q ss_pred ---hccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCccc
Q 011997 130 ---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (473)
Q Consensus 130 ---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~g 205 (473)
+...+.+.+...-++.|++.|.+... .+...|..++++.|..+|.+.....++..++..+++.+.|....+. +
T Consensus 293 i~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~---~ 369 (403)
T PF03209_consen 293 ILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALF---G 369 (403)
T ss_pred HHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c
Confidence 34568889999999999999999885 8888999999999999999999999999999999999987432111 0
Q ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHh
Q 011997 206 SESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (473)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (473)
-. - ..+|-.+|..-++..++.+.+..
T Consensus 370 ~~--~-~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 370 NS--P-ALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred CC--c-chHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 33455666666555555444443
No 250
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.39 E-value=3.8e-07 Score=91.67 Aligned_cols=133 Identities=13% Similarity=-0.001 Sum_probs=107.4
Q ss_pred cccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh-------------
Q 011997 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------------- 379 (473)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 379 (473)
..+++++++..+.|++.+...++..++.++.+ ++.+|.+|++.+.++.++..++.+++.+.+...+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~-~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVS-YFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHH-HhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccc
Confidence 35677999999999999999999999988555 5556679999999888888888777655431100
Q ss_pred --------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHH
Q 011997 380 --------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (473)
Q Consensus 380 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (473)
...+..+++.-++.+++.....+...+++.|.+|+++|+.+.|+.+..
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 012445566777788888888899999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHh
Q 011997 428 MSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 428 ~~~g~~~~~~~~g~l~~~~ 446 (473)
..+|..+|+.+++.+.+..
T Consensus 217 ~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 217 AVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHhhhHHHHHHHHHHHhcc
Confidence 9999999999999998754
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.34 E-value=0.0014 Score=64.67 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=102.7
Q ss_pred hhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHhhccc---
Q 011997 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSV--- 133 (473)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~--- 133 (473)
+.....+.++.++++.+..+ +.-..+.+.-......+..++++|- +||-+++.++.++..++..+..++.
T Consensus 55 g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~ 128 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIP 128 (571)
T ss_pred cchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33456667888899988876 7777777777778888999999996 7899999999888888865443311
Q ss_pred -------------------c---HHHHHHHHHHHhhhcchhHhH-HHHhhhhcc---c-cch--hhhhHHHHHHHHHHHH
Q 011997 134 -------------------N---FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---E-EHQ--ALGLSTVSTAWGIGLI 184 (473)
Q Consensus 134 -------------------~---~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~---~-~~r--~~~~~~~~~~~~~g~~ 184 (473)
+ ...++.+.-+..+|.|..-|+ .++-+|-++ + +++ ...+.++....+.|..
T Consensus 129 ~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l 208 (571)
T KOG1237|consen 129 ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL 208 (571)
T ss_pred hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH
Confidence 1 124555666677788887775 888888887 2 222 3677788888899999
Q ss_pred HHHHHHHHhccccccCCCcccccccc
Q 011997 185 IGPALGGFLAQPAEKYPNLFSSESLF 210 (473)
Q Consensus 185 ~~~~i~~~l~~~~~~~~~~~gw~~~~ 210 (473)
++..+..+.-+ ..||...|
T Consensus 209 ~a~t~~vyiq~-------~~~w~lgf 227 (571)
T KOG1237|consen 209 LAQTVLVYIQD-------NVGWKLGF 227 (571)
T ss_pred HHHHHHHhhhh-------cccceeec
Confidence 99888887766 56666655
No 252
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.33 E-value=0.0002 Score=68.92 Aligned_cols=343 Identities=13% Similarity=0.116 Sum_probs=167.3
Q ss_pred hhHHHHHHHH-HHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc---------c--------------------
Q 011997 84 AGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------V-------------------- 133 (473)
Q Consensus 84 ~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---------~-------------------- 133 (473)
...+-....+ ...+......+++||++|++++-+....+.....++++. +
T Consensus 60 I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~ 139 (491)
T PF03219_consen 60 IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIA 139 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHH
Confidence 4444443333 335567788999999999999887776666655555441 1
Q ss_pred --cHHHHHHHHHHHhhhcchhHh-H-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc-ccccCCCcccccc
Q 011997 134 --NFWMAVLTRFLLGSLNGLLGP-I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPNLFSSES 208 (473)
Q Consensus 134 --~~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~-~~~~~~~~~gw~~ 208 (473)
+.|...+..++.-+-+..... . ..+..|.++.+|-.|..+++..+.++|.+++..+..++.+ .....+
T Consensus 140 ~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~------- 212 (491)
T PF03219_consen 140 MFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLP------- 212 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-------
Confidence 112222333333332223222 4 7889999999999999999999999999999888888876 111110
Q ss_pred cccCCcchhH----HHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchh
Q 011997 209 LFGKFPYFLP----CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (473)
Q Consensus 209 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (473)
.+...|... .....+.+++.+....++.+...+.+...++.++ +++++.+..-..+.+.++|+|.+
T Consensus 213 -~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~---------~kk~k~k~s~~es~k~l~kS~yL 282 (491)
T PF03219_consen 213 -AGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKK---------KKKKKPKMSLKESFKLLLKSKYL 282 (491)
T ss_pred -cccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhc---------ccccCCCccHHHHHHHHHhCHHH
Confidence 001122211 1122222222233333333221111000000000 00000111122345667888887
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHH
Q 011997 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (473)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (473)
....+...++..........+-......+. +...+ ..-.|-.....++..++..+ .++.+-|+.|-+....+..++.
T Consensus 283 ~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~y-safmG~~~~~tGivtii~~~-l~~~iir~~GW~~~AlitPiv~ 359 (491)
T PF03219_consen 283 LCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDY-SAFMGKFSSWTGIVTIIMMF-LSSNIIRRFGWRTAALITPIVI 359 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHhHHHH
Confidence 776666555544433322222211111110 10111 12245566667777777775 6677778778776666554444
Q ss_pred HHHHhHHHHHHHhhh-hhHHH------HHHHHHHHHHHHHHHHH--------HHHHHhhcccCCcchhhHHHHHHH-HHH
Q 011997 365 IPLLTSYPYIAMLSG-FGLAF------LLNCASVVKNLLSVSII--------TGLFILQNRAVDQDQRGAANGIAM-TGM 428 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~g~~~-~~~ 428 (473)
.+....+.......+ ..... .........|....... ...--++---.|+|.|.++-+... .+.
T Consensus 360 lit~~~FF~~~~f~~~~~~~~~~~~~~~pl~lav~~G~i~~v~~K~~kYs~fd~~kEm~yipld~e~k~k~Ka~iD~~~~ 439 (491)
T PF03219_consen 360 LITGLLFFGFILFNNSLGPIVASLFGTSPLMLAVFFGAIQNVLSKSAKYSLFDPTKEMAYIPLDPESKYKGKAAIDVVGS 439 (491)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhccchHHHHHHHHHHHHHHHhhcceeecchhhhhhcccCCHHHHhhcceeeeeecc
Confidence 333222211111110 00000 00111111111111111 111111111237888888888775 566
Q ss_pred HHHHHhhhhhhhHHHHHh
Q 011997 429 SLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~~ 446 (473)
.+|-..|+.+...+....
T Consensus 440 r~GKs~gs~~~~~l~~~~ 457 (491)
T PF03219_consen 440 RLGKSGGSLIQQGLLSLF 457 (491)
T ss_pred chhhHHHHHHHHHHHHHh
Confidence 888888888777776655
No 253
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.31 E-value=0.0011 Score=62.13 Aligned_cols=378 Identities=13% Similarity=0.096 Sum_probs=191.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHH-HHHHHhhhhhhhhcccCCchhhHHH
Q 011997 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
+++++.+.+..++..+. ...+..+.+.+..+... +....++-+..-+ +..+..++..++.++..|++++-.-
T Consensus 26 ~~kflpl~Ll~f~I~~n----y~~lR~lKDslvv~~~g---ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 26 LKKFLPLALLFFCILFN----YNLLRSLKDSLVVTRQG---AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHhhhheEeecCc---chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 44444444444443333 33445556666555322 1116666666666 5678889999999999999999887
Q ss_pred HHHHHHHHHHhhcc---------cc-----------------------HHHHHHHHHHHhhhcchhHh-H-HHHhhhhcc
Q 011997 119 TASVVIFNTLFGLS---------VN-----------------------FWMAVLTRFLLGSLNGLLGP-I-KAYACEIFR 164 (473)
Q Consensus 119 ~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~ 164 (473)
+..+....+++++. ++ .|..-+...+.-+-...... . .....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77777776666652 11 13333333333332223322 4 678899999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhccc----Cc
Q 011997 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE----TL 240 (473)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~ 240 (473)
.+|-.|..++++...+++..++..+..++....+.+... +-....+..+.+....+++.+.+..++.+ .|
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~------~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~ 252 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASE------FKDLLLQILFIVIVILGIIAILLYRYINRNVLTDP 252 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 999999999999999999999999988887621100000 00001233333333343444444444322 12
Q ss_pred CCC-C-CCCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCcc-ccCC
Q 011997 241 HRH-N-DDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK-KLGG 317 (473)
Q Consensus 241 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (473)
... + .+++++++ .+..-..+.+.+.|+|.++...+...+++...... -..|-.... ....
T Consensus 253 ~f~~~~~~kk~~~k--------------~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLv---E~~wKs~ik~~~~~ 315 (509)
T COG3202 253 LFYLRAKKKKKKKK--------------LKLGLIESFKMILRSKYLGAIALLVLAYGVSINLV---EGVWKSGIKELYPT 315 (509)
T ss_pred chhHHHhccccccc--------------ccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHhcCC
Confidence 110 0 00000000 01111234556677887776666655554432222 122211110 0000
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHH---HhhhhhH----HHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA---MLSGFGL----AFLLNCAS 390 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~ 390 (473)
.+--..-.|......++..++...+.+.-+.||.|-.....+..++..+..+++.... ....... ....+++.
T Consensus 316 ~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF~~~~f~~~~~~~~~~~~~~~pl~L~ 395 (509)
T COG3202 316 TNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFFGFAFFNNSIGSIFGGILGSPPLVLA 395 (509)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccCCchHHH
Confidence 0111222455566667776666666777777777776666665555555543332211 1110000 00011111
Q ss_pred HHHHHHHHHH--------HHHHHHhhcccCCcchhhHHHHHHH-HHHHHHHHhhhhhhhHHHHHhh
Q 011997 391 VVKNLLSVSI--------ITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 391 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g 447 (473)
...|...+.. .-..--++.--.++++|.++-+... .+..+|-.+|+.+...+....+
T Consensus 396 v~iG~iqnvlsK~~KYslfD~tKEma~ipldpe~r~kgKAa~D~i~~k~GKSiGSli~~~~~~i~~ 461 (509)
T COG3202 396 VYIGGIQNVLSKITKYSLFDATKEMAYIPLDPEYRTKGKAAVDVIGGKLGKSIGSLIQSLLFIIFP 461 (509)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHcCcCCHhHHhhccchhhhhhhcccccHHHHHHHHHHheec
Confidence 1111111111 1111112222247889999888885 4567888777777666655544
No 254
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.20 E-value=5.2e-05 Score=74.99 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=86.4
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH
Q 011997 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (473)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (473)
.+.+..+-...+........+.+.++.|.+.+. .+...+..+...++..+...+.||+|||+.++.+...+.+
T Consensus 299 ~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 299 GLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 344444444555566666777787777776531 3334444555567777779999999999999999999999
Q ss_pred HHHHhhccccH-----------HHHH---HHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHH
Q 011997 125 FNTLFGLSVNF-----------WMAV---LTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (473)
Q Consensus 125 ~~~~~~~~~~~-----------~~l~---~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (473)
+.++.+..... ..+. .+-++..+..+.......+.+|.+|.+.|+++.++..........+-
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 98887753211 1111 11122222333333236788999999999999998765555444433
No 255
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.10 E-value=4.9e-05 Score=67.45 Aligned_cols=320 Identities=12% Similarity=0.000 Sum_probs=167.6
Q ss_pred HHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHH
Q 011997 96 ALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTV 175 (473)
Q Consensus 96 ~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~ 175 (473)
.+.-.+.=.+.|-.-.|++++.-.+.......+..+.++.+.+-+.-+..|...+.-..-++++-+..+++++.++.+..
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~ 135 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYC 135 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHh
Confidence 34444555688999899999998888888888888899999888888888877665555588999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCCCCcchhh---
Q 011997 176 STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV--- 252 (473)
Q Consensus 176 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--- 252 (473)
..+.-.|-..|..++..+... . ..++.....+......+.....+++|..++....+.++++.
T Consensus 136 RaA~L~g~~~g~vlaQlLvs~--------~------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~ 201 (433)
T KOG3810|consen 136 RAAFLVGKFVGSVLAQLLVSL--------E------TLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVG 201 (433)
T ss_pred HHHHHHHhHHHhHHHHHHhhh--------c------ccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceec
Confidence 999999999999999888752 1 22333333444444445556666777665321111111111
Q ss_pred hHHHhhHhHHHhh---hhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHH
Q 011997 253 SYDALESASAEVK---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVL 329 (473)
Q Consensus 253 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 329 (473)
+.++.....+..+ .....-.....+..+||.++.-.+-..+....+....++.. .+.... .-+-...-.|..=
T Consensus 202 ~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q-~LW~~~---~~~~~~vyNG~ve 277 (433)
T KOG3810|consen 202 DLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQ-ILWKEV---APNPANVYNGAVE 277 (433)
T ss_pred cchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHH-HHHHhh---CCCchhhhcCHHH
Confidence 0011111000000 00000111233445666654433333332222222211111 111110 0011122234444
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011997 330 AITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQN 409 (473)
Q Consensus 330 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
++..+.+.++.+ ..+.+.-...|..-+.++.....-+..+ .+... ..+.+......++....-....++....++
T Consensus 278 Av~tlLGa~~~~-~~g~l~i~w~r~g~~ll~~~s~~~agll-f~m~~---t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 278 AVSTLLGAIAAL-AAGYLNINWNRWGDLLLAVGSAVQAGLL-FIMAQ---TQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred HHHHHHHHHHHH-HHHheeeccchhhHHHHHHHHHHhhhhh-hhhhc---ccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 444555555555 3344432223332222222211111111 11211 122223334344333333444455555556
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 410 RAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 410 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
+..+.|.-|...|+..++.-+-+.+-..+
T Consensus 353 ~nL~~e~~gLvFGiNTFvAl~lQsilT~i 381 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFVALILQSILTLI 381 (433)
T ss_pred HhhhhhhheeeeehHHHHHHHHHHhheEE
Confidence 66788999999999877766655554443
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.05 E-value=4.6e-05 Score=72.94 Aligned_cols=123 Identities=20% Similarity=0.269 Sum_probs=107.7
Q ss_pred HHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhh-hhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 011997 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (473)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G-~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 145 (473)
....++.+..+ .+...+.......+++.+.. .+...+|-|+++..|+..-.+.....+++++.|+.+....+.
T Consensus 268 l~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~ 341 (463)
T KOG2816|consen 268 LKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVV 341 (463)
T ss_pred EeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH
Confidence 34678888888 88888887777788888777 778889999999999999999999999999999999999888
Q ss_pred hhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 146 GSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 146 G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
++.........+.++.+.+++++|+..++......+...++|.+-+.+..
T Consensus 342 ~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 342 ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 88766666669999999999999999999999999999999999887754
No 257
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=9.9e-05 Score=66.60 Aligned_cols=121 Identities=14% Similarity=0.069 Sum_probs=107.2
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccC--CchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHh
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 146 (473)
+.+|.++.| .|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++.+.++....+.++-.+-.
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 678999888 888888888888889999999999987 777788888888878888888898889999999999
Q ss_pred hhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..+...++ ..++....|.++||..+|+......++-++||+++|.+..
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 988887776 8889999999999999999999999999999999998876
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.03 E-value=1.1e-05 Score=75.59 Aligned_cols=169 Identities=11% Similarity=-0.006 Sum_probs=117.3
Q ss_pred ccccccch-hHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhh
Q 011997 276 KSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (473)
Q Consensus 276 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 354 (473)
+..++.|+ ++.....-+.--+.+.+....+..|++...... +|++.+++.-++..++...-....+.+...||..|+|
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 34455444 444555555556777788888888887665444 7899988877777666555555553444445567999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--hhhHHHHHHHHHHHHHH
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFK 432 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~ 432 (473)
+.+.++.++..++.+++.... ......+.+...+...+.+..=+...+++.|.+|++ +|-.++++..+..++|+
T Consensus 93 ~tI~lGail~~iGh~~L~~~~----~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISS----VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccc----cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 999999999999988876642 011122333334444556666677888888887643 46777888889999999
Q ss_pred HhhhhhhhHHHHHhhhc
Q 011997 433 AAGPAGGGALFSWAQKR 449 (473)
Q Consensus 433 ~~~~~~~g~l~~~~g~~ 449 (473)
.++|.+.+++.++.|.+
T Consensus 169 l~~p~i~~~~~~~~g~~ 185 (498)
T COG3104 169 LIAPIITGLLAINYGWH 185 (498)
T ss_pred HHHHHHHHHHHHhhCHH
Confidence 99999999999998854
No 259
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.03 E-value=1.3e-05 Score=77.28 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHH-hcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc----cCCchhhH
Q 011997 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~~~~ 116 (473)
.++...+..++.....+.+...+|.+.++ .|.+..+ .+.+...+.++.+++.+++|.++|| +.+|....
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFI 347 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34456677777777888888999999888 4578877 8999999999999999999999999 67777777
Q ss_pred HHHHHHHHHH-HHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccch-hhhhHHHHHHHHHHHHHHH
Q 011997 117 MGTASVVIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGP 187 (473)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~~~ 187 (473)
....++.... +.....++......+-.....+.....++ .....+....+.| -...+....+.+.+..++|
T Consensus 348 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 348 VFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 7666655544 44433433333333222223334444443 6777776655444 3444444444444444433
No 260
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.98 E-value=5.3e-05 Score=74.19 Aligned_cols=119 Identities=11% Similarity=-0.031 Sum_probs=76.7
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (473)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
.+.|-+ ....++.....+...++.+ ..+.++|.+|||.....+.++..++.+......... .++....+.+.
T Consensus 72 ~diG~~-~~~~w~~~~~~l~~av~~~-~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~------~~iag~~l~Gv 143 (599)
T PF06609_consen 72 ADIGGS-DNWSWFSTAWTLASAVSFP-FVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN------TFIAGMVLYGV 143 (599)
T ss_pred HhcCCC-ccchHHHHHHHHHHHHHHH-hhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH------HHHHHHHHHHH
Confidence 334543 4455666666777777777 567778889999999999999988888765543222 23333444444
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 443 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 443 (473)
+ .+........++|..|.+.|..+.++.....-.....+|.+...+.
T Consensus 144 g-aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 144 G-AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred h-hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 3 3444455666899999999988777665544444445555554443
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.94 E-value=0.0021 Score=61.57 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 386 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
..+..++.+...+........+..+.+++++|..+..+...+-.+|-.+|..+.
T Consensus 375 ~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 375 FIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666666777778889999998888888888888888777653
No 262
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.91 E-value=0.0014 Score=60.44 Aligned_cols=56 Identities=11% Similarity=-0.010 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 011997 386 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 442 (473)
........+...+-.......+..+.+|++++-.+-.+....-..|-+.|. +.+++
T Consensus 346 ~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 346 FIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWV 401 (406)
T ss_pred HHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 444455555566666677788888889888887766665555555554444 33444
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.83 E-value=0.001 Score=66.15 Aligned_cols=140 Identities=19% Similarity=0.101 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHH---HHHHHHHHhhhcchhH-hHHHHhhhhc
Q 011997 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGLLG-PIKAYACEIF 163 (473)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~r~l~G~~~g~~~-~~~~~i~~~~ 163 (473)
...............+...|++|||.....+.++..++.+..++..+... ..+...+...+.+... ....+.+|.+
T Consensus 356 ~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 435 (521)
T KOG0255|consen 356 FTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI 435 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333345555666689999999999999999999999999988765443 3444444444444433 3488899999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHH-HHHHHHHHHHHHhhcccCcCC
Q 011997 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLC-ISLFAFGVTIAAFWLPETLHR 242 (473)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~ 242 (473)
|...|..+.+..+....+|.+++|.+....... . ....... .....+...+...++||+...
T Consensus 436 pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 436 PTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------F--PLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------c--ccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 999999999999999999999999987655431 0 0111112 233333444555889998766
Q ss_pred CC
Q 011997 243 HN 244 (473)
Q Consensus 243 ~~ 244 (473)
..
T Consensus 499 ~l 500 (521)
T KOG0255|consen 499 PL 500 (521)
T ss_pred CC
Confidence 54
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.79 E-value=0.00046 Score=65.21 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=81.2
Q ss_pred hhhHHHHHHHHHHHHHhhcc---cc------HHHHHHHHHHHhhhcchhHhH-HHHhhhhcccc---chhhhhHHHHHHH
Q 011997 113 PVIIMGTASVVIFNTLFGLS---VN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (473)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~ 179 (473)
|+++++.+++.+|.++..++ +. .+.++++-.+.++|.|..-|. .++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888874432 22 367888899999999999886 99999999865 5677888899999
Q ss_pred HHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh
Q 011997 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (473)
Q Consensus 180 ~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (473)
++|..+++.+.+++-+ +++|...|.+..+..++.++....
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999987 556666667766666655554443
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.75 E-value=0.0005 Score=60.12 Aligned_cols=333 Identities=12% Similarity=0.016 Sum_probs=155.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhc
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIF 163 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~ 163 (473)
.|.+.-+-.+...+..+.+..+.||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|..-...--++..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 45555666677777778888888886543334455667777888889999999999998888888877655433333334
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhh-cccCcCC
Q 011997 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHR 242 (473)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~ 242 (473)
++. ..+-+..+.+.++.+|..-=..+.+ | + ..+.+...++...+..+....+++ +++++..
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~----------~---~-~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~ 205 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTS----------W---A-NLSPKSTLLIMLFLPALFAFAYFFLLKSPESV 205 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhh----------h---c-CCChhhHHHHHHHHHHHHHHHHHheeCCCccc
Confidence 432 2222333333334444333233332 1 1 444555556655555555444444 3333222
Q ss_pred CC-CCCcchhhhHHHhhHhHHHhhhhh--cccCCccccc-cccchhHHHHHHHHHHHhhh-hhhhHHHHHhhcCccccCC
Q 011997 243 HN-DDDDSCDVSYDALESASAEVKEEE--GREATPKKSL-LKNWPLMSSIIVYCVFSLHD-MAYSEIFSLWANSPKKLGG 317 (473)
Q Consensus 243 ~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (473)
.. .-++..+...+.... .+..+++ .......++- .+-++++..++-.+..++.. +.-++..++..... .++
T Consensus 206 ~~ptl~~~~~~~~~~~~~--~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c--~~g 281 (409)
T KOG3880|consen 206 YSPTLQPSTEIIPSQYLP--FEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPC--SHG 281 (409)
T ss_pred cCCCcCccceeccCCCCc--ccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEecc--ccC
Confidence 11 111111110000000 0000111 0011111111 11222222333222222222 22223333332211 122
Q ss_pred CCCChh-hHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 011997 318 LNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 396 (473)
Q Consensus 318 ~~~~~~-~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (473)
+..+.. |.-+....+.++..+.+- ..+.+ +.+.+....++..+-+..+.+-....-.+..+...+..+.=|..
T Consensus 282 ~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~-~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLl 355 (409)
T KOG3880|consen 282 FSLSKDSQYRWYQVLYQLGVFISRS-----SINLF-TMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLL 355 (409)
T ss_pred CccchhhcchhhheeeeeeEEEEec-----cceEE-echHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhc
Confidence 222222 344455555555433322 11211 22233333333333332222221111122223334444455556
Q ss_pred HHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 397 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
++..+...+--+.+..+++.|--+++...+.-.+|-.++..++=.+.+
T Consensus 356 GGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh~ 403 (409)
T KOG3880|consen 356 GGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLHN 403 (409)
T ss_pred CchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccchh
Confidence 666666666666666888999999999988888888877776655544
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.69 E-value=0.0021 Score=55.33 Aligned_cols=249 Identities=9% Similarity=-0.031 Sum_probs=116.4
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccccCCcchhHHHHHHHHHHHHHHHHhhcccCcCCCCC
Q 011997 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (473)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (473)
|+|+........+.++|.++.-..--.-.+. +..- +..|+..+.+.+++.++-++.+..+ +++-+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~----------~~~~-~~~W~~I~si~~lL~~IpLIly~if-Gk~fd~~~ 69 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSV----------VIAL-TNNWQWILSIFILLIFIPLILYIIF-GKNFDIYS 69 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchH----------HHHH-HHHHHHHHHHHHHHHHHHHHHHHHh-cccccccC
Confidence 5566666666777778877664442111110 0111 4457776666666665555555444 22211111
Q ss_pred CCcchhhhHHHhhHhHHHhhhhhcccCCccccccccchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCC----C
Q 011997 246 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY----S 321 (473)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 321 (473)
+++.++ +++...+.+....+.+|++..|...+.+..+......- ..+.+..........+. +
T Consensus 70 ~~~k~~------------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p--~t~~~~~~~~~~s~~ni~~~~~ 135 (267)
T PF07672_consen 70 PKEKQE------------KENSTLSKKPSYKSILKEKETWKWILIYGIWLVVVVFP--FTPSWFNILIWISPANIKSVVS 135 (267)
T ss_pred cccccc------------cccccccccchHHHHHccchHHHHHHHHHHHheeEEEe--ccchhHhHhhhcCccccccccc
Confidence 110000 00112223456788999999988888777665332111 01111110000000111 0
Q ss_pred hh----hHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHH----HHHHHHhHHHHHHHhhhhhHHHHHHHHHHHH
Q 011997 322 TQ----MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV----LTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (473)
Q Consensus 322 ~~----~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (473)
.. .........-.+..+|...++.+-....+||+.+..... ...+..++ .......+......+.+..++.
T Consensus 136 ~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~ 214 (267)
T PF07672_consen 136 GGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLA 214 (267)
T ss_pred ccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHH
Confidence 11 112222232333334444455555445556665443222 22222222 1111111122334466777777
Q ss_pred HHHHHHHHHHHHHhhccc--CCcchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 011997 394 NLLSVSIITGLFILQNRA--VDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 441 (473)
+.+.-++++.......|. .+|++.|...|+.-.++++.-.+.-.+...
T Consensus 215 G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~ 264 (267)
T PF07672_consen 215 GFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSV 264 (267)
T ss_pred HHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777776666653 356777777777766666665555544443
No 267
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.67 E-value=0.00027 Score=61.61 Aligned_cols=130 Identities=18% Similarity=0.056 Sum_probs=87.9
Q ss_pred ccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh--hhHHHHHHHH
Q 011997 312 PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCA 389 (473)
Q Consensus 312 ~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 389 (473)
+...+.+|+|..|...+.....++..++ + ..+.+.|+.+++.++.++.+...++...+.......- .+.|. +.+.
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~-~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~-~~~~ 102 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYFG-I-LAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWL-MCLF 102 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcc-H-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHH-HHHH
Confidence 3355668999999999999888888775 4 5667777789999999999998888877765544322 22232 2222
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 390 SVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
..+.+...............+.+| ++||++.|+.-....+++++-..+...+++.
T Consensus 103 ~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 103 LFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 222222222222333333445687 6899999999999999988877766666654
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.56 E-value=0.0099 Score=47.73 Aligned_cols=104 Identities=16% Similarity=0.050 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 011997 333 GFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV 412 (473)
Q Consensus 333 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.....+..+ ..+.+.++.|.|+.+.++.+...+..+.... ..+..++....+.+++....+.....++.+..
T Consensus 47 Y~~~~~s~l-~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 47 YGSFAISCL-FAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------PNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHH-hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 333444444 4566778889999998888877766655433 23445667777778888888888888899989
Q ss_pred CcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 413 DQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 413 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
+++.+++-.++.-...+.+..+|..+.-.+..
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999888888877665544
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.40 E-value=0.031 Score=50.91 Aligned_cols=124 Identities=11% Similarity=0.032 Sum_probs=78.4
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 011997 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 396 (473)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (473)
++|++..+++.++......+.+.+.+.+ .+.||.|||+..+...++..+..+.- .......+++.=++.+..
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G-~laD~~Grk~~cl~~cily~~scl~k-------~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVG-SLADRYGRKKACLLFCILYSLSCLTK-------HSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHH-------hccccHHHHHHHHHHHHH
Confidence 4799999999999998888888888554 45556799888777777666666532 112233344555555555
Q ss_pred HHHHHHHHHHhh-----cccCCcchhhHHHHHHHH-HHHHHHHhhhhhhhHHHHHhhh
Q 011997 397 SVSIITGLFILQ-----NRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 397 ~~~~~~~~~~~~-----~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~g~ 448 (473)
........-++. .+-+|++..+...+.... .+.+-.+++..++..+.++.+.
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~ 192 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF 192 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC
Confidence 555555543333 223566666776665552 3444555666666677776654
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.14 E-value=0.0013 Score=63.25 Aligned_cols=149 Identities=16% Similarity=0.207 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhcc----------ccHHHHHHHHHHHhhhcch-h
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMAVLTRFLLGSLNGL-L 152 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~~~g~-~ 152 (473)
.+.+..+..++..++..+..+.--++.-|+++.++.++..+..+.-..- ++.+-.+.--++..+.... .
T Consensus 257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 7888888888888999999888888888999988888777666543221 1222222333455554444 4
Q ss_pred HhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCCCcccc-cccccCCcchhHHHHHHHHHHHHHH
Q 011997 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS-ESLFGKFPYFLPCLCISLFAFGVTI 231 (473)
Q Consensus 153 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~gw-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (473)
.|...+++|+.|+...+..+++.....++|..++..++..+.+ .++. +..| ..-|.+ .++..+..++.+.
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~-------~~~vt~~~f-~~l~~l-ili~~~~~ll~l~ 407 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME-------LFGVTRDDF-SNLWLL-ILICSVIQLLPLP 407 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCcccc-cchHHH-HHHHHHHHHHHHH
Confidence 5568889999999999999999999999999999999999988 3432 1123 222222 3444444455555
Q ss_pred HHhhcccCcC
Q 011997 232 AAFWLPETLH 241 (473)
Q Consensus 232 ~~~~~~e~~~ 241 (473)
...++|++.+
T Consensus 408 ll~lLp~~~~ 417 (433)
T PF03092_consen 408 LLFLLPPQKR 417 (433)
T ss_pred HHHHcCCCch
Confidence 5667776543
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.11 E-value=0.0063 Score=56.81 Aligned_cols=107 Identities=17% Similarity=0.264 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH-----HHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHH
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV-----IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~ 157 (473)
..+....|.+|-.++.--...+ |+ |++.+.+.+-.. +.....-+.++.|..++.-+..|+.+|...+ ...
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6666677776655553322211 33 444444332222 2222333467889888889999998888777 577
Q ss_pred HhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
.+.|..++++|..+++....+-++|..++.+++-.+-
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7888899999999999999999999999998886654
No 272
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.10 E-value=0.0075 Score=60.82 Aligned_cols=129 Identities=9% Similarity=-0.070 Sum_probs=88.1
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh--hhHHHHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASVVKNL 395 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 395 (473)
+|++...+..+........-+...+.+...|+++|+++.+.++.++..++..++........ .......++...+...
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 57777777666665555555555557777788999999999999888888766654322111 1111223333344445
Q ss_pred HHHHHHHHHHHhhcccCCcc---hhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 396 LSVSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
+.++.-|...+...+.++++ .+-+...+.....++|+.+++.+.+++.+..
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55666677888888877643 4777888888899999999999999987654
No 273
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.03 E-value=0.01 Score=41.19 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHH
Q 011997 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (473)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (473)
-..+++.+....+...+++.|+. +.|+++.++|.+.++..+..+++.++. +.+.||.++++......
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~------~~Gl~~~~iGil~~i~~~~~~~~~pl~-g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLK------QLGLSPSQIGILSAIRPLIRFLAPPLW-GFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhh------hcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCccHHHHHHH
Confidence 34455555555555556665543 359999999999999999999999955 55555566666554443
No 274
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.98 E-value=0.0056 Score=57.00 Aligned_cols=127 Identities=13% Similarity=-0.060 Sum_probs=79.4
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhh-hhhHH-HHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-GFGLA-FLLNCASVVKNL 395 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 395 (473)
|| +...+-+...++.+..++..+. +-|+.|++|-|....++.....++..+=....... .+..+ ........+...
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~-~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFA-AMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhH-HHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH
Confidence 45 5556667777778888888874 44555556888888888887777765443322210 01111 122222222222
Q ss_pred HHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 396 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
....+.....-....-+|+++|+++..+..+.+.+|.+++..+.+.+..+.
T Consensus 153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 222222222223344579999999999999999999999999999988776
No 275
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.98 E-value=0.013 Score=55.66 Aligned_cols=129 Identities=8% Similarity=-0.108 Sum_probs=93.3
Q ss_pred hhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhh---cc---c
Q 011997 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LS---V 133 (473)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~---~ 133 (473)
....+..+...-|.++.. +|..-+...+....+.+...++.+|+|..|.=+++...-..+..++. +. +
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 455556666666999998 99999999999999999999999999998888777665443333222 12 2
Q ss_pred ----cHHHHHHHHHHHhhh-cchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 134 ----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 134 ----~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
+...++.+-.+.=+| .+.-....-++-|..|+++|+...|.-....++-.++...++-.+.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 233344444444444 3333344788899999999999999999999888888877765444
No 276
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.75 E-value=0.39 Score=43.17 Aligned_cols=100 Identities=12% Similarity=0.167 Sum_probs=64.6
Q ss_pred HHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhcc--ccch-
Q 011997 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQ- 168 (473)
Q Consensus 93 ~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~--~~~r- 168 (473)
+..+..+++.+.+..++|-|+++.++...+..... .-+=+.+..++-+-...|++.+..... -+++++.-. .++|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 34445566666899999999999888777655432 223467788889999999998887665 556555443 2334
Q ss_pred --------hhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 169 --------ALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 169 --------~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
.+-.+.+.+....+...|..++..+
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555554444443
No 277
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.68 E-value=0.01 Score=56.72 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=89.7
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (473)
.+-+.+..|+..+...++..+..+..+.|-.|+..-|+.+..+.+++.++..++......+.. ...++.+.=++. ..+
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~-~~y~mL~~R~l~-Gvg 143 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNG-VKYLMLVARILT-GVG 143 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHc-CcC
Confidence 466777899999999999999999888887776554777888888888888888555443332 222233333333 333
Q ss_pred HHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 398 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
.+.....-.++++..-.++|.++++..+....+|..+||.+......
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 45566677788876777889999999888888888888887655543
No 278
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.58 E-value=0.074 Score=50.76 Aligned_cols=145 Identities=15% Similarity=0.261 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHH---HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhc---ccCCchhhH
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMI---KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVII 116 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~Grr~~~~ 116 (473)
.+.+....+.+++..+......|.-. +..+.+... ..++-.-...++..++..+.+.+.+ |+||++.+.
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-----~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-----LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-----HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 33444455556665555555555332 222222221 2444444555666666676777765 589999999
Q ss_pred HHHHHHHHHHHHhhcc------------------ccHHHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHH
Q 011997 117 MGTASVVIFNTLFGLS------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST 177 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~ 177 (473)
++..+..++.++.-.. +++...++.-++.|++-+..... +..+.+.. +++|..+.++...
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kf 395 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKF 395 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHH
Confidence 9988888877766442 24566777889999998888775 88888888 6788889888887
Q ss_pred HHHHHHHHHHHHHHHh
Q 011997 178 AWGIGLIIGPALGGFL 193 (473)
Q Consensus 178 ~~~~g~~~~~~i~~~l 193 (473)
-..++..++-......
T Consensus 396 yq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 396 YQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHhhhhhhh
Confidence 7777777665554433
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.51 E-value=0.00049 Score=67.69 Aligned_cols=132 Identities=16% Similarity=0.028 Sum_probs=2.6
Q ss_pred cccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh-------------
Q 011997 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------------- 379 (473)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 379 (473)
.++++++++..+.|++.+..-++.++..+++..+-.| ..|.+.+-.+.++..++.+++.+-+...+
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccc
Confidence 4678899999999999999999999998877666544 46777777777777777665544221110
Q ss_pred -------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHH
Q 011997 380 -------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (473)
Q Consensus 380 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (473)
...+..+++..++.|++....++...+++.|.++++..+...|+..+..
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~ 186 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMS 186 (539)
T ss_dssp ---------------------------------------------SSS--------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHh
Confidence 0124556677788888888899999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHH
Q 011997 429 SLFKAAGPAGGGALFSW 445 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~ 445 (473)
.+|-++|-.+++.+...
T Consensus 187 ~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 187 ILGPALGFLLGSFCLRI 203 (539)
T ss_dssp -----------------
T ss_pred hccHHHHHHHHHHHHhc
Confidence 99999998888887643
No 280
>PRK03612 spermidine synthase; Provisional
Probab=96.07 E-value=0.45 Score=46.98 Aligned_cols=139 Identities=14% Similarity=0.080 Sum_probs=76.6
Q ss_pred HHHHhhhhhhhhhhhHH-HHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHH---
Q 011997 49 IVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI--- 124 (473)
Q Consensus 49 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~--- 124 (473)
..++.++..-.+-.... .+..-+|.+..+ .+.+.+++..|.++|+.+.+++.++--|+ ....-+.+..+
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~ 94 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGL 94 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHH
Confidence 33344443333333333 334456777777 89999999999999999999887432222 22111111111
Q ss_pred HHHHh-h---ccccH-HHHHHHHHHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 125 FNTLF-G---LSVNF-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 125 ~~~~~-~---~~~~~-~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..+. . ..... ..++..-++.++..|...|. ..+..+ ...++-++..|-......+|.++|.++.+++.-
T Consensus 95 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 95 SALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 11111 1 11111 11223334556666666664 333332 222234667788888899999999999887764
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.01 E-value=0.12 Score=47.11 Aligned_cols=150 Identities=11% Similarity=0.003 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHH
Q 011997 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (473)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (473)
+..+.+.++.+++-.+.-+.......++.+++-+.-. +.+.-..+-.....+..++.|...|+..|+|++...+.
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~-----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL-----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh-----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 3345577777777777777777777777776654322 02222233344456778888999999999999887765
Q ss_pred HHHHHHHHhh------c------cccHHHHHHHHHHHhhhcch--hHh-HHHH--hhhhc----cccchhhhh---HHHH
Q 011997 121 SVVIFNTLFG------L------SVNFWMAVLTRFLLGSLNGL--LGP-IKAY--ACEIF----REEHQALGL---STVS 176 (473)
Q Consensus 121 ~~~~~~~~~~------~------~~~~~~l~~~r~l~G~~~g~--~~~-~~~~--i~~~~----~~~~r~~~~---~~~~ 176 (473)
+--++.+.++ + +.++..+..+-++.-...+. ... +.+. -.||. ..+.+.... +...
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir 181 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIR 181 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhh
Confidence 5444333322 2 13555555555544332222 121 2222 23343 223333333 4444
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 011997 177 TAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 177 ~~~~~g~~~~~~i~~~l~~ 195 (473)
..-..-..++|.+.|.+.+
T Consensus 182 ~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 182 GIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred hhhhhhhchhhhhhcccce
Confidence 4555667889999998887
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.83 E-value=0.99 Score=43.75 Aligned_cols=125 Identities=8% Similarity=0.017 Sum_probs=82.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhh-------------------
Q 011997 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG------------------- 381 (473)
Q Consensus 321 ~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 381 (473)
+.+...++.+..-+...+.-.....++.+|.+|+++...........+.++.+........
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4466777776665555555223556677778888887776666666655555442211000
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 382 ------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 382 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
..+...+..+..-..+....+ ..+.+++|..+.++..+-.++.....++|..+++.+..++.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011112222333344445555 7899999999999999999999999999999999999888753
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.73 E-value=0.15 Score=35.84 Aligned_cols=71 Identities=21% Similarity=0.175 Sum_probs=53.4
Q ss_pred hhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHH
Q 011997 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (473)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (473)
.-+.+...+|... ++.++|..+.|++-+.+.++..++.+ ...++.++.++++.+..+.+...+....+.+.
T Consensus 7 gRFayTplLP~M~------~~~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 7 GRFAYTPLLPLMQ------ADGGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHHhHhHHHH------HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666543 34589999999999999999999998 45566665567788888888887777776664
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.62 E-value=0.25 Score=47.58 Aligned_cols=109 Identities=14% Similarity=0.059 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCc--hhhHHH--HHHHHHHHHHhhcc---------ccHHHHHHHHHHHhhhcc
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMG--TASVVIFNTLFGLS---------VNFWMAVLTRFLLGSLNG 150 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~~~~~--~~~~~~~~~~~~~~---------~~~~~l~~~r~l~G~~~g 150 (473)
.-.....+.++-.+|..+..+.. .-++| ++++.+ =+++....++|..- ++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 55667778888888887654431 11223 333322 22333333344322 355667777899999999
Q ss_pred hhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 151 ~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
..... ..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88775 78888889999999999999999999999988876544
No 285
>PRK03612 spermidine synthase; Provisional
Probab=95.48 E-value=1 Score=44.52 Aligned_cols=130 Identities=16% Similarity=0.008 Sum_probs=65.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHH---HhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL---LTSYPYIAMLSGFGLAFLLNCASVVKN 394 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (473)
+|-+..+.+.+.+..-.+..+|+. .++++.++..++. ...-..+..++ ..++...... ............+..+
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAF-QGLSRLLLYVLVLLIG 121 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 466777777777777677767766 3444443222221 11111111111 1111111100 0011122222233334
Q ss_pred HHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH-Hhhhccc
Q 011997 395 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS-WAQKRLD 451 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~ 451 (473)
+..+...|...-+..+. ..++.++..|-......+|+.+|+.+.+.+.- ..|...+
T Consensus 122 ~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t 178 (521)
T PRK03612 122 LLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRT 178 (521)
T ss_pred HHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence 44455566655544432 22345677788889999999999999988764 6665443
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.29 E-value=0.0058 Score=55.94 Aligned_cols=54 Identities=11% Similarity=0.031 Sum_probs=2.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhh
Q 011997 386 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 439 (473)
..+..++.++..+-.......+..+.+++++|..+-.+....-..|-.+|..+.
T Consensus 251 ~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 251 FIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ----------------HHHH----------------------------------
T ss_pred HHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555566666777778888889998888888887778777776654
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.99 E-value=1.4 Score=39.67 Aligned_cols=118 Identities=19% Similarity=0.067 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011997 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (473)
Q Consensus 323 ~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (473)
...+.......+...++.. ..+.+.|+.|||+....+............+... .......+.....+.......+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSL-LAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN----VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHH
Confidence 4677777777788888776 4455555558776666665442232222222111 1122223333334455556778
Q ss_pred HHHHhhcccCCc-chhhHHHHHHHH-HHHHHHHhhhhhhhHHHHH
Q 011997 403 GLFILQNRAVDQ-DQRGAANGIAMT-GMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 403 ~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~ 445 (473)
....+..+..|+ +.|+...+.... ....+..++|.+.+.+.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899998887 688999998888 5888889999888877776
No 288
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.08 E-value=3.7 Score=38.87 Aligned_cols=123 Identities=11% Similarity=0.014 Sum_probs=85.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (473)
.|++..|..--.-+.+.=+-...++...++.|..+.|+++++..+...+...++.+.. .. ..+-+..+..+..
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~-----sv-~~mq~~q~~yg~~- 107 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT-----SV-LAMQLMQFFYGLA- 107 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC-----cH-HHHHHHHHHHHHH-
Confidence 5888888776555555555555555777888888999998888877777766665532 11 1233333333222
Q ss_pred HHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHhh
Q 011997 398 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 447 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 447 (473)
...-...++++-..+|+++--++.+......-.|..++..++-.+....+
T Consensus 108 ~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 108 TAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred HHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34455666777777899999999999999999999999888887776443
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.97 E-value=0.018 Score=52.69 Aligned_cols=107 Identities=19% Similarity=0.141 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcc-cCCchhhHHH--HHHHHHHHHHhhc----------cccHHHHHHHHHHHhhhcchh
Q 011997 86 YVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG--TASVVIFNTLFGL----------SVNFWMAVLTRFLLGSLNGLL 152 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~--~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~~g~~ 152 (473)
.....+.++-.+|..+.++.--+ -.+|++.+.+ -+++....++|.. -+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45667888888888877763211 1345444332 1222222223311 234466677788899999988
Q ss_pred HhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (473)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 192 (473)
... ..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775 8888899999999988888888888888888776543
No 290
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.41 E-value=0.021 Score=48.96 Aligned_cols=67 Identities=16% Similarity=0.283 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhh---------hcccCCch
Q 011997 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLV---------ADRYGRKP 113 (473)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l---------~dr~Grr~ 113 (473)
.+....+.+.+....++....+-.+.++.|.++.. ...++.+..+.-++..++.|.. .||+|||+
T Consensus 19 vf~yGvGHmlNDitAScWFTYlllfltqiglsp~~------~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 19 VFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSS------RAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred eeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcch------hHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 33445566677777777777777778888999887 7788888888888888888744 46999987
Q ss_pred hh
Q 011997 114 VI 115 (473)
Q Consensus 114 ~~ 115 (473)
..
T Consensus 93 ~w 94 (412)
T KOG4830|consen 93 SW 94 (412)
T ss_pred ee
Confidence 64
No 291
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.52 E-value=0.16 Score=51.13 Aligned_cols=156 Identities=14% Similarity=-0.053 Sum_probs=113.8
Q ss_pred cccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh-------------
Q 011997 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------------- 379 (473)
Q Consensus 313 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 379 (473)
.+++.++++..+.|++....-++..+...++..+-. |..|.+++-.+.++..++.++..+-+...+
T Consensus 122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~-r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~ 200 (735)
T KOG3626|consen 122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGS-RGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSV 200 (735)
T ss_pred hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcc-ccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccc
Confidence 366779999999999988888888888775555444 456777777777777777665554321100
Q ss_pred ---------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHH
Q 011997 380 ---------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (473)
Q Consensus 380 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (473)
...|..+++..++.|++....++...+++.|.+.+++.....|+..+
T Consensus 201 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~ 280 (735)
T KOG3626|consen 201 ENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYS 280 (735)
T ss_pred cCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHH
Confidence 01456677778888888888899999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHhhhcc--------ccccccCCchhhhhhhhhh
Q 011997 427 GMSLFKAAGPAGGGALFSWAQKRL--------DASFLPGMMPKKTLIISLM 469 (473)
Q Consensus 427 ~~~~g~~~~~~~~g~l~~~~g~~~--------~~~~~~~~~~~~~~~~~~~ 469 (473)
+..+|=++|-.+++.+.......+ ...-|.|+..+.|++...+
T Consensus 281 ~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 281 MAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGAL 331 (735)
T ss_pred HHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence 999999999999999886544331 1123456666666655543
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.46 E-value=1.4 Score=41.24 Aligned_cols=109 Identities=19% Similarity=0.108 Sum_probs=75.8
Q ss_pred hhhhHHHHH-HHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHh---------hccccHHHHHHHHHHHhhhcch
Q 011997 82 SYAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---------GLSVNFWMAVLTRFLLGSLNGL 151 (473)
Q Consensus 82 ~~~g~~~~~-~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~g~ 151 (473)
++.-++..+ +.+...+|.+.+.++-++ +||+..+.. .+-.+..-++ .+-.+-++++..-.+.|+..|-
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v-~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPV-LLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHH-HHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 335566666 888888887777776554 344443333 3222222222 2245667788888999999999
Q ss_pred hHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 011997 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (473)
Q Consensus 152 ~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 192 (473)
.... ..+..+..|++++-.+-.+.......|...|..++..
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 8886 8888999999998888888888888888888777643
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.57 E-value=1.9 Score=40.89 Aligned_cols=111 Identities=17% Similarity=0.070 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH-HHHhhhhc
Q 011997 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (473)
Q Consensus 85 g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~ 163 (473)
.|-..++.+...+.+...-++.||+|-|+.+..+...+.++..+.+..++.+....-|-..|+-.+....+ +..+++..
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 44456677777899999999999999888888877778888888888888888888888888643332221 22222211
Q ss_pred ---------------------c--ccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 164 ---------------------R--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 164 ---------------------~--~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
. ...+|...|+.+....+.+++.....|.+.+
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~ 469 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQ 469 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhh
Confidence 1 1223556667777777777777766666665
No 294
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=86.76 E-value=1.4 Score=41.75 Aligned_cols=95 Identities=8% Similarity=-0.082 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc---hhhHHHHHHHHHH
Q 011997 355 MVARIAGVLTIPLLTSYPYIAMLSGF---GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGM 428 (473)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 428 (473)
+.+.++.++..++.+++......... .....+.+...+...+.++.=|....+..|.++++ +|.+.........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 34566666677776665544433221 11223444444555667777788888888888654 5677778888999
Q ss_pred HHHHHhhhhhhhHHHHHhhhc
Q 011997 429 SLFKAAGPAGGGALFSWAQKR 449 (473)
Q Consensus 429 ~~g~~~~~~~~g~l~~~~g~~ 449 (473)
++|..+++.+.+++-++.+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~ 102 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWF 102 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HH
T ss_pred hhhhHhhcccchhhccccchh
Confidence 999999999999999776654
No 295
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.32 E-value=3 Score=36.47 Aligned_cols=101 Identities=22% Similarity=0.276 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcc-cCCchhhH----HHHHHHHHHHHHhhc-c----ccHHHHHHHHHHHhhh-cchh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSL-NGLL 152 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~-~g~~ 152 (473)
.....-++..|..+|....|+.... +.||+.+. .+++.+.+..++... . .++..+++.-++.|++ .|..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4555666777777888888888764 55555544 233444444433211 1 1456677777888885 4443
Q ss_pred HhHHHHhhhhccccchhhhhHHHHHHHHHHHHH
Q 011997 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (473)
Q Consensus 153 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (473)
. +.-.+...++..++.+.--.++..+++|-++
T Consensus 223 ~-ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 G-VILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred H-HHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3 3333444444444433333445555555543
No 296
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=77.69 E-value=26 Score=34.17 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=42.8
Q ss_pred HHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
+..++..+..-...+ ..++-+.+.+|..=|+.|.+.+...++|+.--..+.-++.+
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 334555555444444 48889999999999999999999999998777777666666
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=76.76 E-value=33 Score=32.22 Aligned_cols=39 Identities=10% Similarity=-0.127 Sum_probs=24.3
Q ss_pred HHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhh
Q 011997 402 TGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (473)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 440 (473)
.......-....+++.|-++.........|.+++..+.=
T Consensus 152 IAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifL 190 (510)
T KOG3574|consen 152 IAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFL 190 (510)
T ss_pred hhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceee
Confidence 344555555677788877776666666666666655443
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=76.24 E-value=12 Score=33.87 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 011997 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (473)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 193 (473)
.+++.+......+.++++..++.-+.-|+-+|...+ ..--+.+-.++++|-.+++.....-++|..++.+++-.+
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344455556667789999988888999996666555 465666767889999999999988888888887776544
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.86 E-value=8.3 Score=28.18 Aligned_cols=49 Identities=20% Similarity=0.219 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhH
Q 011997 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI 155 (473)
Q Consensus 85 g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 155 (473)
+.-.+.-+++..+.....||+.||| +++-++.++.-.+.|++.|.....
T Consensus 45 a~klssefIsGilVGa~iG~llD~~----------------------agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKF----------------------AGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh----------------------cCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3444555666677778889999996 333333444445666666666554
No 300
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=71.91 E-value=1.1e+02 Score=30.28 Aligned_cols=124 Identities=8% Similarity=0.026 Sum_probs=73.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhh-----hhh-------------H
Q 011997 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-----GFG-------------L 382 (473)
Q Consensus 321 ~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------------~ 382 (473)
+++.+.++=...-+...+.-.....++.++.++.++.............++++.-.+. ... .
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 5565655544333322222233556666777888876665555555554444432110 000 0
Q ss_pred -------HHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 011997 383 -------AFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 444 (473)
Q Consensus 383 -------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 444 (473)
.+...+..+..-..+....+ ..+.+++|..+.++..+..++.....++|..+++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111222222233333333 579999999999999999999999999999999998888887
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=70.93 E-value=24 Score=25.78 Aligned_cols=29 Identities=7% Similarity=0.067 Sum_probs=18.0
Q ss_pred HhhHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 011997 341 LSLYPFLERILGPIMVARIAGVLTIPLLT 369 (473)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (473)
.+++.|+|++++..+...+.+++..++..
T Consensus 60 ~~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 60 VAVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 34889999998865544444444444433
No 302
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.77 E-value=33 Score=30.44 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCc--hhhHHHHHHHHHHHHHhh----ccc---cHHHHHHHHHHHhhhcchhHh
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFG----LSV---NFWMAVLTRFLLGSLNGLLGP 154 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~~~~~~~~~~~~~~~~~----~~~---~~~~l~~~r~l~G~~~g~~~~ 154 (473)
-|.+.+.++++.++|+-+..++..|-..| ..+.+...+..+...+.. .++ +...-+++..+.-.+.|.+.|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 68999999999999999998888775543 334444443333332222 222 233335555666677888888
Q ss_pred H-HHHhhhhccccchhhhhHHHHHHHH
Q 011997 155 I-KAYACEIFREEHQALGLSTVSTAWG 180 (473)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (473)
. ..+-+...|++.|...+.++..-.+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhh
Confidence 6 7788889999999999888755443
No 303
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=66.84 E-value=80 Score=27.88 Aligned_cols=20 Identities=5% Similarity=-0.082 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 011997 220 LCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e~ 239 (473)
.++.++.++....+.+++.+
T Consensus 119 ~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHHHHHheeeecCC
Confidence 44444444444444455433
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.54 E-value=51 Score=26.33 Aligned_cols=39 Identities=8% Similarity=0.109 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHH
Q 011997 395 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 433 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 433 (473)
+++.+...+.|.+++..-++++.|+..|+-.+-.+++..
T Consensus 106 ~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 106 FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 455566677788888889999999999999888887654
No 305
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=57.83 E-value=1.9e+02 Score=29.20 Aligned_cols=131 Identities=13% Similarity=-0.020 Sum_probs=75.2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhhh------------------
Q 011997 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------------------ 379 (473)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 379 (473)
++.+...+.-................+.+.|...||-+.+.++..+..+++.++........
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 35555544444444444444444434444455778988888888888777666555443221
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----cchhh--HHHHHHHHHHHHHHHhhhhhhhHHHHHhhh
Q 011997 380 -FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD----QDQRG--AANGIAMTGMSLFKAAGPAGGGALFSWAQK 448 (473)
Q Consensus 380 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g--~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 448 (473)
......+.........+.++.-+...++-.+.+| .+.+. .-+.......+.|..++-.+.-++-++.+-
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w 223 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGW 223 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 0111223333333444556667777888888887 22233 455566677788887777777777665543
No 306
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=55.10 E-value=46 Score=30.92 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=70.9
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHH--HHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHh-HHH
Q 011997 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT--ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (473)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~ 157 (473)
+.+-|..-++..+..+++.+..|.+--++.|..-++++. ..-+...++++-+++.|..+++.++.+.......+ +..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 344677778888888999999999998888875444443 34444445666788999998888888776666655 477
Q ss_pred HhhhhccccchhhhhHHHHH
Q 011997 158 YACEIFREEHQALGLSTVST 177 (473)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~ 177 (473)
-+++...+|.-|..+|+...
T Consensus 350 ~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHhhhhhhheeeeehHHH
Confidence 77787887887888777644
No 307
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=54.50 E-value=1.5e+02 Score=28.06 Aligned_cols=41 Identities=12% Similarity=0.044 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccccccccC
Q 011997 417 RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 457 (473)
Q Consensus 417 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 457 (473)
.....+.....-..-..+.|.+.|.+.+..+...+...+.+
T Consensus 173 lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~ 213 (503)
T KOG2601|consen 173 LTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAA 213 (503)
T ss_pred HhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHH
Confidence 33333555566677888999999999988776554433333
No 308
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=53.50 E-value=1.2e+02 Score=24.65 Aligned_cols=68 Identities=18% Similarity=0.255 Sum_probs=32.0
Q ss_pred hHHHHHhhcCccccCCCCCChhhHHHHHH--HHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHH
Q 011997 302 SEIFSLWANSPKKLGGLNYSTQMVGEVLA--ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 371 (473)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (473)
....|.++..|.... .+.....|.... ..++.+++++++-...+.|..+...=+..|.+.-.+...++
T Consensus 47 T~v~P~~ll~Pf~~g--~wk~t~~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~l 116 (173)
T PF11085_consen 47 TEVGPNFLLEPFALG--DWKNTWLGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVL 116 (173)
T ss_pred cccccChhhhhhhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh
Confidence 334444444443332 233334444443 33556666666444444444455555555655555544444
No 309
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=52.24 E-value=1.6e+02 Score=28.54 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=76.8
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHH
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
+.++...+.+-.++..++.....|. .+..++|++.++ ...+.+.-.+...++.++--....+.|-|-....+
T Consensus 14 ~~~~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG 85 (451)
T COG2233 14 PLGKLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLG 85 (451)
T ss_pred ChHHHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEe
Confidence 3455555555555555554443332 234678899888 88999998899999998887644445555444444
Q ss_pred HHHHHHHHHHhhc-c--ccHHHHHHHHHHHhhhcchhHhHHH-Hhhhhccccchhhhh
Q 011997 119 TASVVIFNTLFGL-S--VNFWMAVLTRFLLGSLNGLLGPIKA-YACEIFREEHQALGL 172 (473)
Q Consensus 119 ~~~~~~~~~~~~~-~--~~~~~l~~~r~l~G~~~g~~~~~~~-~i~~~~~~~~r~~~~ 172 (473)
.....++...... . +.....+.+-+..|+..-...+... .+...+||---|..+
T Consensus 86 ~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 86 SSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred chHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 4444444433333 3 2356666666666666555555544 777778876655443
No 310
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=50.87 E-value=2.3e+02 Score=27.10 Aligned_cols=29 Identities=0% Similarity=-0.098 Sum_probs=16.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhHHHH
Q 011997 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (473)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 347 (473)
+....+.+++...+.+.+++.+.+..-.+
T Consensus 340 ~ag~le~~Flv~lfsIisil~a~~~V~~v 368 (536)
T COG3559 340 GAGALEQAFLVLLFSIISILAAAFAVSLV 368 (536)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566666666666666655433333
No 311
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.33 E-value=48 Score=24.43 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccc
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.|-+.++|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+.+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 78889999999999999999999999887777778777777776655543
No 312
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=48.37 E-value=2.1e+02 Score=25.88 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=38.8
Q ss_pred HHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 011997 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 138 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 194 (473)
--..|.+.|+-.-.+.|-+++++-.+|++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888876667778999999999665544444444555566667777766554
No 313
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=45.11 E-value=3.3e+02 Score=27.22 Aligned_cols=26 Identities=8% Similarity=0.174 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhh
Q 011997 326 GEVLAITGFSLLVFQLSLYPFLERILG 352 (473)
Q Consensus 326 g~~~~~~~~~~~i~~~~~~~~~~~~~~ 352 (473)
........+.+.+++. .+.++-+.++
T Consensus 300 t~~i~~y~~~~~iaGy-~S~~~yk~~~ 325 (521)
T PF02990_consen 300 TAAIILYALTSFIAGY-VSARLYKSFG 325 (521)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHcC
Confidence 3344445566666666 3444444444
No 314
>COG4769 Predicted membrane protein [Function unknown]
Probab=45.10 E-value=29 Score=27.81 Aligned_cols=52 Identities=17% Similarity=0.322 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhh
Q 011997 90 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (473)
Q Consensus 90 ~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 147 (473)
++.+...+.+...-++..++|+|.+=++|... ..++.+|..++.+++++.+-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 34445566666677888899988875555543 34668999999999988764
No 315
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=44.51 E-value=2e+02 Score=24.44 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=16.6
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.++|.+.-.......-++..+|..+++.+.+
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3443233334445555666666666666665
No 316
>PRK02237 hypothetical protein; Provisional
Probab=43.25 E-value=78 Score=23.45 Aligned_cols=50 Identities=16% Similarity=0.075 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccc
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.|-+.++|.-.+.+.++.+++..|+.-+-+-=.+|..+..++..+..+.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 78889999999999999999999998877777777777777765554443
No 317
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=43.23 E-value=84 Score=19.83 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=19.6
Q ss_pred HHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHH
Q 011997 336 LLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (473)
Q Consensus 336 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (473)
.++.....+.++|++++..+...+..++..+.
T Consensus 13 ~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 13 PILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 33344458899999988866555444444333
No 318
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.02 E-value=1.5e+02 Score=22.03 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=17.5
Q ss_pred HHHHHHHHhhHHHHHHhhhhhHHHHHHHHH
Q 011997 334 FSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (473)
Q Consensus 334 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
+.+++....++.++|+..+..++-++.+++
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 334444444777888887776654444433
No 319
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.23 E-value=78 Score=26.30 Aligned_cols=25 Identities=16% Similarity=0.533 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCc
Q 011997 88 GSSFMFGRALTSVFWGLVADRYGRK 112 (473)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr 112 (473)
+.-|.+++.+.+.+.|+++||..+|
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3557788899999999999998863
No 320
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=39.18 E-value=1e+02 Score=24.67 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHHHHHHHHH
Q 011997 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (473)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (473)
++...++..-.+.|+ |.....|..++-..++++.|..+|+-.+-.+++-+.-
T Consensus 95 P~~~~~~~S~~~Fg~--gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGL--GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHH--HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 344444444443333 3334446777777888889999999888877776543
No 321
>COG2119 Predicted membrane protein [Function unknown]
Probab=38.44 E-value=2.3e+02 Score=23.51 Aligned_cols=37 Identities=14% Similarity=0.292 Sum_probs=28.6
Q ss_pred HHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 011997 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 91 ~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (473)
..++..++...+.++++|+..|++-..+.+++.+..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 4456678888889999999999998887776665543
No 322
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=36.39 E-value=1.1e+02 Score=24.48 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 011997 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (473)
Q Consensus 89 ~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (473)
.-|.+++.+.+.+.|++.+|..+++..........++.+
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 98 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLL 98 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 457788889999999999998887433333333333333
No 323
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=35.90 E-value=85 Score=25.70 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=12.9
Q ss_pred HHHhhhhhhhhcccCCchhhHHH
Q 011997 96 ALTSVFWGLVADRYGRKPVIIMG 118 (473)
Q Consensus 96 ~~~~~~~G~l~dr~Grr~~~~~~ 118 (473)
.+.-.+.|.+.-|++.++...-+
T Consensus 127 ~~~L~ilG~~~a~~s~~~~~~s~ 149 (169)
T TIGR00267 127 LIALLVLGVYLGRISRENILISS 149 (169)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHH
Confidence 34445566666666666555433
No 324
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=34.27 E-value=4e+02 Score=25.05 Aligned_cols=185 Identities=15% Similarity=0.018 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHHHHhhhhhhhHHHHHhhcCccccCCCCCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHH--
Q 011997 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR-- 358 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-- 358 (473)
++.-+.+.++.+.+..+...+.........+- .|-+..|.+.+.+.+-...-+++...-...++..-.+-+..
T Consensus 6 ~~~~alL~laVf~~aa~GlvyElal~tLatyL-----lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vEl 80 (508)
T COG4262 6 NRWRALLLLAVFVCAACGLVYELALGTLATYL-----LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVEL 80 (508)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh-----cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHH
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhh
Q 011997 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (473)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 438 (473)
...++..++...+.+............+......+|...+.-.|....+.++ ..++.....+.....-++|...+..+
T Consensus 81 llgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~--r~a~~k~~~s~vl~~DYLGal~~gLl 158 (508)
T COG4262 81 LLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR--RQAKAKDLGSRVLTLDYLGALAGGLL 158 (508)
T ss_pred HHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH--HHHHHHhhhhhhhhhHhhhhhhHHHH
Q ss_pred hhHHHHHhhhccccccccCCchhhhhhhhhhhcc
Q 011997 439 GGALFSWAQKRLDASFLPGMMPKKTLIISLMLAK 472 (473)
Q Consensus 439 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (473)
.+++.----.---.....|.+.++.++..+.+.|
T Consensus 159 ~p~lllP~LGl~rta~laG~~Nl~aAvv~~fllr 192 (508)
T COG4262 159 WPFLLLPRLGLVRTAALAGLCNLAAAVVTLFLLR 192 (508)
T ss_pred HHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHH
No 325
>PRK11469 hypothetical protein; Provisional
Probab=33.97 E-value=2.8e+02 Score=23.19 Aligned_cols=50 Identities=10% Similarity=-0.000 Sum_probs=27.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (473)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
+.+.........+............+++..++.+++....-+.++..+++
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444445466666677777666555555554444
No 326
>PRK11469 hypothetical protein; Provisional
Probab=31.98 E-value=2.6e+02 Score=23.43 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=39.4
Q ss_pred ChHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHH-HHHHHhhhhhhhhcccCCchhhHH
Q 011997 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (473)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~ 117 (473)
..+....+.++..++.+....-.... |.+.-. ......+..+ ....+..++.++.+++|||.-++-
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~~-------g~~~~~------~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lg 170 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAFL-------QVNIIA------TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILG 170 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh-------hhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666666544332221 222221 2222222222 223344455566677888877777
Q ss_pred HHHHHHHHHH
Q 011997 118 GTASVVIFNT 127 (473)
Q Consensus 118 ~~~~~~~~~~ 127 (473)
+.++..++.-
T Consensus 171 G~iLI~iGi~ 180 (188)
T PRK11469 171 GLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHH
Confidence 7777776643
No 327
>COG3162 Predicted membrane protein [Function unknown]
Probab=30.17 E-value=2.2e+02 Score=20.75 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=23.3
Q ss_pred cccccccch--hHHHHHHHHHHHhhhhhhhHHHHHhhcCcc
Q 011997 275 KKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (473)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (473)
++++.+.++ .+...+.++.+++.......+.+.|+..+.
T Consensus 15 f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~ 55 (102)
T COG3162 15 FRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATPL 55 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcc
Confidence 444444443 344555666666666666677777777764
No 328
>COG3619 Predicted membrane protein [Function unknown]
Probab=29.78 E-value=3.7e+02 Score=23.29 Aligned_cols=28 Identities=14% Similarity=-0.012 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCC
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGR 111 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Gr 111 (473)
.........+..+++......+..|..|
T Consensus 57 ~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 57 LAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555566666666665555555555554
No 329
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=29.01 E-value=3.3e+02 Score=25.74 Aligned_cols=18 Identities=17% Similarity=0.229 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 011997 177 TAWGIGLIIGPALGGFLA 194 (473)
Q Consensus 177 ~~~~~g~~~~~~i~~~l~ 194 (473)
...+.|.+--|++.....
T Consensus 102 ~~~N~~~lglpi~~~l~g 119 (385)
T PF03547_consen 102 SFGNTGFLGLPILQALFG 119 (385)
T ss_pred cCCcchhhHHHHHHHHhc
Confidence 345555555555554443
No 330
>COG1971 Predicted membrane protein [Function unknown]
Probab=28.79 E-value=3.5e+02 Score=22.65 Aligned_cols=26 Identities=15% Similarity=-0.081 Sum_probs=14.5
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHH
Q 011997 343 LYPFLERILGPIMVARIAGVLTIPLL 368 (473)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
+++...+..|++..+..+.++..++.
T Consensus 156 IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 156 IGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45555555566666665555554443
No 331
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=28.50 E-value=4.5e+02 Score=23.89 Aligned_cols=71 Identities=8% Similarity=0.051 Sum_probs=37.0
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcc---cCCchhhHHHHHHH
Q 011997 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR---YGRKPVIIMGTASV 122 (473)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr---~Grr~~~~~~~~~~ 122 (473)
+....++.-+..+.....+..+.+..+.-.+. .++..+... ..+..+-.++ ||.||.=+++.+..
T Consensus 30 L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~------~al~lal~A------~~~a~r~~~~~~TfGy~R~eiLaa~~n 97 (296)
T COG1230 30 LNLAFMLIEIIGGLLTGSLALLADALHMLSDA------LALLLALIA------IKLARRPATKRFTFGYKRLEILAAFLN 97 (296)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHhHHHHHHHH------HHHHHHHHH------HHHhcCCCCCCCCccHhHHHHHHHHHH
Confidence 33334444444444555556666667766655 555554433 2233344443 77777766666555
Q ss_pred HHHHHH
Q 011997 123 VIFNTL 128 (473)
Q Consensus 123 ~~~~~~ 128 (473)
++..+.
T Consensus 98 av~Li~ 103 (296)
T COG1230 98 ALLLIV 103 (296)
T ss_pred HHHHHH
Confidence 554443
No 332
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=28.45 E-value=1.2e+02 Score=19.97 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchh
Q 011997 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (473)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~ 169 (473)
++..+......-++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 344444444444555566666678888888875543
No 333
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.32 E-value=6.2e+02 Score=24.39 Aligned_cols=97 Identities=9% Similarity=0.035 Sum_probs=54.1
Q ss_pred HHhcccccchhhhhhhhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhh
Q 011997 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (473)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 148 (473)
... .++++ ...+.+...+...+++++-+...++.-|-.......+.+...........++.....+-++.|+.
T Consensus 31 ~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~ 103 (415)
T TIGR00801 31 LAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLV 103 (415)
T ss_pred ccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 444 67776 78888888888899999998877654222333333323322222222233444444455555554
Q ss_pred cchhHhH-----HHHhhhhccccchhhhh
Q 011997 149 NGLLGPI-----KAYACEIFREEHQALGL 172 (473)
Q Consensus 149 ~g~~~~~-----~~~i~~~~~~~~r~~~~ 172 (473)
....... ...+.+.+|+.-.+...
T Consensus 104 ~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 104 YTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 4443331 23457778887766544
No 334
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=25.28 E-value=2.4e+02 Score=24.97 Aligned_cols=21 Identities=24% Similarity=0.350 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhh
Q 011997 42 ELFSIWIIVLCTALPISSLFP 62 (473)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~ 62 (473)
++.-+.++.+...+-.....|
T Consensus 181 RivG~~LAv~aGvlyGs~fvP 201 (254)
T PF07857_consen 181 RIVGIILAVFAGVLYGSNFVP 201 (254)
T ss_pred hhHhHHHHHHHHHHHhcccch
Confidence 444444444333333333334
No 335
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=24.87 E-value=6.3e+02 Score=24.29 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=24.1
Q ss_pred HHHhhhcchhHhH-HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHH
Q 011997 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (473)
Q Consensus 143 ~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 189 (473)
++.|+..|..... ..++ |..+-++---+..+...+...|.+..++.
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 343 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPIT 343 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHh
Confidence 3445444444332 3333 45555665566777666655565555554
No 336
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=23.77 E-value=7.2e+02 Score=24.61 Aligned_cols=126 Identities=10% Similarity=0.038 Sum_probs=76.2
Q ss_pred CChhhHHHHHHHHHH-HHHHHHHhhHHHHHHhhhhhHHHHHHHHHHHHHHhHHHHHHHhh-----------------hhh
Q 011997 320 YSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-----------------GFG 381 (473)
Q Consensus 320 ~~~~~~g~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 381 (473)
.+++.+.++-...-+ ++++... +..++.++..+.++............+++++.-.+. .+.
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~-iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTI-IYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 456666666555444 3444444 455566666777776666555555555555443210 000
Q ss_pred H--H-------HHHHHHHHHHHHHHHHHHH-HHHHhhcccCCcchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHh
Q 011997 382 L--A-------FLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 446 (473)
Q Consensus 382 ~--~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 446 (473)
. | +......++.-..+..... ..+...+|....++..+-.++.+...+++..++..+..++..+.
T Consensus 137 ~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 137 FLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred cceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 0 0 1122222222233333333 57888999999999999999999999999999888888887643
No 337
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=23.61 E-value=2.1e+02 Score=20.32 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=26.3
Q ss_pred HHHhhhhhhhhcccCC-------chhhHHHHHHHHHHHHHhhcccc
Q 011997 96 ALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVN 134 (473)
Q Consensus 96 ~~~~~~~G~l~dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
....+.++++.+|..+ ++.+..+.++...+.+++++.++
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 4455666666666554 67777777777777777776554
No 338
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=23.30 E-value=1.2e+02 Score=26.21 Aligned_cols=50 Identities=10% Similarity=0.020 Sum_probs=30.5
Q ss_pred HHHHHHhhhcchhHh-HHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 011997 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (473)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 190 (473)
+...-.|+|.|.... +..-+.+.+| +......++......+....|-...
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334557888776665 4777777776 5556666666655555555554443
No 339
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=22.57 E-value=6.4e+02 Score=23.57 Aligned_cols=106 Identities=21% Similarity=0.273 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccCCchhhHHHHHHHH---HHHHHhhccccHHHHHHHHHHHhhhcchh--HhHHHH
Q 011997 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV---IFNTLFGLSVNFWMAVLTRFLLGSLNGLL--GPIKAY 158 (473)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~--~~~~~~ 158 (473)
.|....+..++ -+-.++.+++.+++|--+.+..+.++.. --.+....+.|......+-.+.|.-.|.. ...+.-
T Consensus 49 ~GI~~laP~la-~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLA-AFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 45544555444 3556777888999999998888766643 23355566777777776666666644432 333555
Q ss_pred hhhhccccchhhhhHHHHH--HHHHHHHHHHHHH
Q 011997 159 ACEIFREEHQALGLSTVST--AWGIGLIIGPALG 190 (473)
Q Consensus 159 i~~~~~~~~r~~~~~~~~~--~~~~g~~~~~~i~ 190 (473)
+..+-+++++..+.|+... ...+|..++.++.
T Consensus 128 Lgii~k~D~~y~a~Gil~GiitIPiG~~vggl~~ 161 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGILAGIITIPIGCFVGGLIA 161 (354)
T ss_pred hhhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHH
Confidence 5555555666666666532 2334555444443
No 340
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=22.40 E-value=4.6e+02 Score=25.40 Aligned_cols=30 Identities=13% Similarity=-0.036 Sum_probs=15.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 011997 416 QRGAANGIAMTGMSLFKAAGPAGGGALFSW 445 (473)
Q Consensus 416 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 445 (473)
.|+.+.-.++..-.....+-|...=.+...
T Consensus 391 s~~~tv~Ay~~GD~~tNlI~PfWaLP~L~i 420 (438)
T TIGR00366 391 DLGKSVMAIAYGDAWTNMAQPFWALPALGI 420 (438)
T ss_pred CHHHHHHHHHHHhHhHHHhhHHHHHHHHHH
Confidence 344444455555555566666644444433
No 341
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.09 E-value=2.3e+02 Score=18.24 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=15.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhcccC
Q 011997 212 KFPYFLPCLCISLFAFGVTIAAFWLPET 239 (473)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (473)
.+++.....+..+.+++...+...+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445555556666665555554455543
No 342
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=21.94 E-value=5e+02 Score=22.09 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=13.4
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 011997 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (473)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 350 (473)
|.+.........+............+++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~ 184 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKK 184 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444444433333333333345544443
No 343
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=21.83 E-value=4.5e+02 Score=25.57 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=8.9
Q ss_pred HhhhhhhhhcccCC
Q 011997 98 TSVFWGLVADRYGR 111 (473)
Q Consensus 98 ~~~~~G~l~dr~Gr 111 (473)
.+++..++.||.-+
T Consensus 76 ~sp~v~r~l~~lA~ 89 (453)
T PF02667_consen 76 SSPPVKRLLDRLAS 89 (453)
T ss_pred CChHHHHHHHHHHh
Confidence 45677777776543
No 344
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=20.42 E-value=5.1e+02 Score=21.57 Aligned_cols=40 Identities=18% Similarity=-0.066 Sum_probs=25.2
Q ss_pred HHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 011997 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (473)
Q Consensus 156 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 195 (473)
.+.+.+..|+++|.++.-+--....+--.+--..+.++.+
T Consensus 18 i~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~ 57 (183)
T PF03741_consen 18 IAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLS 57 (183)
T ss_pred HHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 5667777898888877655444444444555556666665
No 345
>PLN02878 homogentisate phytyltransferase
Probab=20.07 E-value=4e+02 Score=23.98 Aligned_cols=72 Identities=15% Similarity=0.046 Sum_probs=34.4
Q ss_pred ccCCchhhHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhcchhHhHHHHhhhhccccchhhhhHHHHHHH
Q 011997 108 RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAW 179 (473)
Q Consensus 108 r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 179 (473)
|+|+|++..++..+..++........-.........+...|........-.=+...+.+++....+.++..+
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~~~L~~rs~~vD~~sk~~i~~fY~fiw 266 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILASILWQRAQSVDLSSKAAITSFYMFIW 266 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcCcccHHHHHHHHHHHH
Confidence 688888888877766666553222111111122333444443333222222233344455555666665544
Done!