Query 012000
Match_columns 473
No_of_seqs 452 out of 2774
Neff 8.0
Searched_HMMs 13730
Date Mon Mar 25 19:38:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012000.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012000hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 7.1E-40 5.2E-44 314.2 21.0 230 208-452 4-253 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 1.1E-39 7.8E-44 311.7 19.6 225 209-448 2-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 6.4E-40 4.7E-44 315.7 16.8 235 213-450 1-258 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 3.6E-37 2.6E-41 297.4 11.0 214 210-426 1-234 (265)
5 d1in4a2 c.37.1.20 (A:17-254) H 99.9 7.4E-24 5.4E-28 199.8 22.8 214 211-451 4-234 (238)
6 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 1.1E-22 8E-27 191.8 21.5 214 211-451 4-235 (239)
7 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 7.2E-22 5.2E-26 187.3 13.5 182 217-405 10-206 (246)
8 d1njfa_ c.37.1.20 (A:) delta p 99.9 5.6E-21 4.1E-25 180.4 18.2 202 207-448 3-237 (239)
9 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 6.7E-21 4.9E-25 178.5 16.9 189 203-417 11-215 (231)
10 d1sxjc2 c.37.1.20 (C:12-238) R 99.8 8.3E-21 6.1E-25 177.3 16.5 206 206-448 4-225 (227)
11 d1sxja2 c.37.1.20 (A:295-547) 99.8 1.4E-20 9.9E-25 178.4 17.0 192 207-413 5-224 (253)
12 d1sxjb2 c.37.1.20 (B:7-230) Re 99.8 5.9E-20 4.3E-24 171.3 17.3 185 206-416 5-206 (224)
13 d1sxjd2 c.37.1.20 (D:26-262) R 99.8 2.1E-19 1.6E-23 168.2 19.2 206 207-448 3-235 (237)
14 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 4.1E-20 3E-24 181.0 12.2 165 217-381 15-213 (309)
15 d1w44a_ c.37.1.11 (A:) NTPase 99.8 7.5E-22 5.5E-26 192.4 -8.0 147 235-384 107-276 (321)
16 d1sxje2 c.37.1.20 (E:4-255) Re 99.8 1E-18 7.5E-23 165.0 13.5 173 207-403 2-225 (252)
17 d1fnna2 c.37.1.20 (A:1-276) CD 99.7 1.6E-16 1.1E-20 150.6 20.9 215 212-451 12-273 (276)
18 d1l8qa2 c.37.1.20 (A:77-289) C 99.6 5.3E-15 3.9E-19 136.4 18.3 186 211-417 5-211 (213)
19 d1svma_ c.37.1.20 (A:) Papillo 99.6 3E-16 2.2E-20 155.9 8.2 187 247-451 152-354 (362)
20 d1w5sa2 c.37.1.20 (A:7-293) CD 99.6 5.3E-15 3.8E-19 140.6 16.5 221 214-450 14-286 (287)
21 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 3.1E-14 2.3E-18 140.0 18.5 208 211-449 2-303 (333)
22 d1a5ta2 c.37.1.20 (A:1-207) de 99.5 1.1E-13 8.1E-18 126.8 17.1 160 220-409 6-201 (207)
23 d1r6bx2 c.37.1.20 (X:169-436) 99.5 9.4E-14 6.8E-18 131.6 15.7 213 213-451 15-265 (268)
24 d1r6bx3 c.37.1.20 (X:437-751) 99.5 1.2E-13 8.8E-18 134.7 15.8 197 216-423 22-282 (315)
25 d1qvra3 c.37.1.20 (A:536-850) 99.5 1.7E-13 1.3E-17 133.5 16.2 196 217-423 24-287 (315)
26 d1wfda_ a.7.14.1 (A:) Hypothet 99.4 1.4E-13 1E-17 109.1 8.5 71 53-123 11-81 (93)
27 d1um8a_ c.37.1.20 (A:) ClpX {H 99.4 5.3E-13 3.8E-17 132.4 14.7 204 217-420 18-335 (364)
28 d1wr0a1 a.7.14.1 (A:5-81) Vacu 99.4 3.8E-14 2.8E-18 108.5 3.7 70 52-121 6-76 (77)
29 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 2.6E-13 1.9E-17 122.0 5.6 147 213-378 19-194 (195)
30 d1qvra2 c.37.1.20 (A:149-535) 99.3 2.4E-12 1.7E-16 128.3 12.1 190 212-420 18-244 (387)
31 d1g41a_ c.37.1.20 (A:) HslU {H 99.3 1.7E-11 1.2E-15 124.4 16.6 70 218-287 16-87 (443)
32 d1gvnb_ c.37.1.21 (B:) Plasmid 99.1 9.8E-12 7.1E-16 117.2 4.7 67 213-287 4-70 (273)
33 d1ny5a2 c.37.1.20 (A:138-384) 99.1 5.4E-10 3.9E-14 104.5 14.0 197 217-446 1-245 (247)
34 d2gnoa2 c.37.1.20 (A:11-208) g 99.0 3E-10 2.2E-14 102.7 10.1 109 249-371 15-140 (198)
35 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.8 4E-08 2.9E-12 91.5 15.7 181 209-417 5-253 (283)
36 d1zp6a1 c.37.1.25 (A:6-181) Hy 98.2 8.3E-07 6E-11 76.7 6.2 36 250-285 5-40 (176)
37 d1kaga_ c.37.1.2 (A:) Shikimat 98.2 5.6E-07 4.1E-11 76.4 4.5 31 250-280 3-33 (169)
38 d1lw7a2 c.37.1.1 (A:220-411) T 98.1 3.5E-07 2.5E-11 79.5 2.9 37 249-285 7-43 (192)
39 d1rkba_ c.37.1.1 (A:) Adenylat 98.0 9.6E-07 7E-11 76.0 3.6 30 251-280 6-35 (173)
40 d1viaa_ c.37.1.2 (A:) Shikimat 98.0 1.7E-06 1.2E-10 74.6 3.6 32 250-281 1-32 (161)
41 d1e6ca_ c.37.1.2 (A:) Shikimat 97.9 2.2E-06 1.6E-10 74.3 3.8 31 250-280 3-33 (170)
42 d1qhxa_ c.37.1.3 (A:) Chloramp 97.9 4.3E-06 3.1E-10 71.9 5.1 36 249-284 3-38 (178)
43 d1knqa_ c.37.1.17 (A:) Glucona 97.9 4.4E-06 3.2E-10 71.7 4.5 33 249-281 6-38 (171)
44 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 2.5E-05 1.8E-09 67.3 9.5 26 251-276 2-27 (178)
45 d2iyva1 c.37.1.2 (A:2-166) Shi 97.8 3.8E-06 2.7E-10 72.4 3.8 30 252-281 4-33 (165)
46 d1y63a_ c.37.1.1 (A:) Probable 97.8 8.3E-06 6.1E-10 70.0 5.1 30 249-278 5-34 (174)
47 d2bdta1 c.37.1.25 (A:1-176) Hy 97.8 6.4E-06 4.7E-10 70.4 4.3 29 250-278 3-31 (176)
48 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.8 6E-06 4.4E-10 71.2 3.6 24 250-273 2-25 (189)
49 d1zaka1 c.37.1.1 (A:3-127,A:15 97.7 5E-06 3.7E-10 73.2 2.4 37 249-287 3-39 (189)
50 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.7 1.2E-05 8.7E-10 70.8 4.9 31 249-279 6-36 (194)
51 d1zina1 c.37.1.1 (A:1-125,A:16 97.7 1.3E-05 9.5E-10 69.6 4.4 30 251-280 2-31 (182)
52 d2a5yb3 c.37.1.20 (B:109-385) 97.6 0.00024 1.7E-08 66.2 13.1 47 217-272 21-67 (277)
53 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.6 2.1E-05 1.5E-09 69.0 5.0 35 250-286 4-38 (190)
54 d2cdna1 c.37.1.1 (A:1-181) Ade 97.6 1.4E-05 1E-09 69.6 3.6 30 251-280 2-31 (181)
55 d1m8pa3 c.37.1.15 (A:391-573) 97.6 9.1E-06 6.6E-10 69.9 1.9 26 250-275 7-32 (183)
56 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.6 1.8E-05 1.3E-09 69.8 4.0 35 251-287 8-42 (189)
57 d3adka_ c.37.1.1 (A:) Adenylat 97.6 2.3E-05 1.7E-09 69.1 4.5 38 249-288 8-45 (194)
58 d1ukza_ c.37.1.1 (A:) Uridylat 97.6 2.2E-05 1.6E-09 69.3 4.4 31 250-280 9-39 (196)
59 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.5 2.5E-05 1.8E-09 68.1 4.4 30 251-280 2-31 (182)
60 d1akya1 c.37.1.1 (A:3-130,A:16 97.5 2.5E-05 1.8E-09 68.1 4.3 30 251-280 4-33 (180)
61 d1teva_ c.37.1.1 (A:) UMP/CMP 97.5 3E-05 2.2E-09 68.1 4.6 35 250-286 2-36 (194)
62 d1ly1a_ c.37.1.1 (A:) Polynucl 97.5 2.7E-05 2E-09 65.2 3.8 35 250-285 3-37 (152)
63 d1e4va1 c.37.1.1 (A:1-121,A:15 97.5 3.4E-05 2.5E-09 66.9 4.2 30 251-280 2-31 (179)
64 d1x6va3 c.37.1.4 (A:34-228) Ad 97.5 8.7E-06 6.3E-10 71.3 0.2 30 249-278 19-48 (195)
65 d1ckea_ c.37.1.1 (A:) CMP kina 97.5 4E-05 2.9E-09 68.4 4.6 34 251-286 5-38 (225)
66 d1yj5a2 c.37.1.1 (A:351-522) 5 97.4 4E-05 2.9E-09 66.5 4.2 32 247-278 12-43 (172)
67 d1bifa1 c.37.1.7 (A:37-249) 6- 97.3 9.1E-05 6.7E-09 65.3 5.6 33 250-282 3-38 (213)
68 d1q3ta_ c.37.1.1 (A:) CMP kina 97.3 6.1E-05 4.5E-09 67.4 4.4 28 252-279 6-33 (223)
69 d1tuea_ c.37.1.20 (A:) Replica 97.3 0.00047 3.4E-08 60.6 10.0 34 247-280 51-84 (205)
70 d1okkd2 c.37.1.10 (D:97-303) G 97.1 0.00027 2E-08 62.9 6.3 35 249-283 6-43 (207)
71 d1w36d1 c.37.1.19 (D:2-360) Ex 97.1 0.001 7.3E-08 64.3 10.1 20 250-269 164-183 (359)
72 d1khta_ c.37.1.1 (A:) Adenylat 97.0 0.00015 1.1E-08 62.2 3.3 25 250-274 2-26 (190)
73 d1np6a_ c.37.1.10 (A:) Molybdo 96.9 0.00019 1.4E-08 60.7 3.3 30 251-280 4-36 (170)
74 d1tf7a2 c.37.1.11 (A:256-497) 96.9 0.0011 8E-08 59.6 8.0 36 247-282 24-62 (242)
75 d1m7ga_ c.37.1.4 (A:) Adenosin 96.8 0.00036 2.6E-08 62.2 4.4 37 249-285 24-64 (208)
76 d1vmaa2 c.37.1.10 (A:82-294) G 96.7 0.00046 3.4E-08 61.6 4.2 37 247-283 9-48 (213)
77 d2qy9a2 c.37.1.10 (A:285-495) 96.7 0.004 2.9E-07 55.1 10.3 37 248-284 8-47 (211)
78 d1gkya_ c.37.1.1 (A:) Guanylat 96.7 0.00055 4E-08 59.6 4.3 28 250-277 2-29 (186)
79 d1nksa_ c.37.1.1 (A:) Adenylat 96.7 0.00023 1.7E-08 61.3 1.8 25 251-275 3-27 (194)
80 d1lvga_ c.37.1.1 (A:) Guanylat 96.7 0.00053 3.9E-08 59.9 4.2 28 251-278 2-29 (190)
81 d1uf9a_ c.37.1.1 (A:) Dephosph 96.6 0.00066 4.8E-08 59.0 4.3 29 251-280 5-33 (191)
82 d1rz3a_ c.37.1.6 (A:) Hypothet 96.5 0.0012 8.6E-08 57.0 5.5 24 251-274 24-47 (198)
83 d2crba1 a.7.16.1 (A:8-90) Nucl 96.5 0.0057 4.2E-07 44.7 7.9 61 54-114 5-65 (83)
84 d1j8yf2 c.37.1.10 (F:87-297) G 96.5 0.0022 1.6E-07 56.9 6.9 35 248-282 11-48 (211)
85 d1n0wa_ c.37.1.11 (A:) DNA rep 96.4 0.00085 6.2E-08 58.4 3.6 29 245-273 19-47 (242)
86 d1ls1a2 c.37.1.10 (A:89-295) G 96.4 0.0045 3.2E-07 54.7 8.4 36 249-284 10-48 (207)
87 d1szpa2 c.37.1.11 (A:145-395) 96.2 0.00091 6.7E-08 59.8 2.7 26 247-272 32-57 (251)
88 d1znwa1 c.37.1.1 (A:20-201) Gu 96.1 0.0016 1.2E-07 56.0 4.1 26 250-275 3-28 (182)
89 d1v5wa_ c.37.1.11 (A:) Meiotic 96.1 0.0017 1.3E-07 58.2 4.3 28 246-273 34-61 (258)
90 d1pzna2 c.37.1.11 (A:96-349) D 96.1 0.0015 1.1E-07 58.8 3.4 27 247-273 34-60 (254)
91 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.0 0.015 1.1E-06 47.7 9.6 21 252-272 3-23 (160)
92 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.9 0.0094 6.9E-07 49.8 7.7 22 251-272 4-25 (165)
93 d1htwa_ c.37.1.18 (A:) Hypothe 95.8 0.0069 5E-07 51.0 6.3 29 248-276 32-60 (158)
94 d1a1va1 c.37.1.14 (A:190-325) 95.8 0.01 7.4E-07 48.1 7.2 35 249-283 8-42 (136)
95 d1p9ra_ c.37.1.11 (A:) Extrace 95.8 0.0067 4.8E-07 59.2 7.0 60 209-281 131-193 (401)
96 d1uj2a_ c.37.1.6 (A:) Uridine- 95.8 0.0028 2E-07 55.8 3.9 26 251-276 4-29 (213)
97 d1kkma_ c.91.1.2 (A:) HPr kina 95.7 0.0036 2.6E-07 53.8 4.3 30 249-279 14-43 (176)
98 d1xjca_ c.37.1.10 (A:) Molybdo 95.7 0.0029 2.1E-07 53.4 3.5 31 251-281 3-36 (165)
99 d1odfa_ c.37.1.6 (A:) Hypothet 95.7 0.011 7.7E-07 54.8 7.7 39 247-285 25-69 (286)
100 d1tf7a1 c.37.1.11 (A:14-255) C 95.6 0.0053 3.9E-07 54.1 5.1 37 247-283 24-64 (242)
101 d1xp8a1 c.37.1.11 (A:15-282) R 95.5 0.022 1.6E-06 52.2 9.2 35 249-283 57-94 (268)
102 d2i1qa2 c.37.1.11 (A:65-322) D 95.5 0.0033 2.4E-07 55.9 3.4 27 247-273 32-58 (258)
103 d1mo6a1 c.37.1.11 (A:1-269) Re 95.5 0.015 1.1E-06 53.2 7.9 36 249-284 60-98 (269)
104 d1kgda_ c.37.1.1 (A:) Guanylat 95.4 0.0058 4.2E-07 52.5 4.6 28 250-277 4-31 (178)
105 d1zj6a1 c.37.1.8 (A:2-178) ADP 95.3 0.023 1.7E-06 47.6 8.2 24 249-272 15-38 (177)
106 d1knxa2 c.91.1.2 (A:133-309) H 95.3 0.0048 3.5E-07 53.0 3.5 30 249-279 15-44 (177)
107 d1g6oa_ c.37.1.11 (A:) Hexamer 95.2 0.0072 5.3E-07 57.1 5.0 25 250-274 167-191 (323)
108 d1ko7a2 c.91.1.2 (A:130-298) H 95.2 0.0064 4.6E-07 51.8 4.1 29 249-278 15-43 (169)
109 d1cr2a_ c.37.1.11 (A:) Gene 4 95.2 0.018 1.3E-06 52.4 7.6 36 247-282 33-72 (277)
110 d1s96a_ c.37.1.1 (A:) Guanylat 95.1 0.0072 5.3E-07 53.2 4.2 25 250-274 3-27 (205)
111 d1ctqa_ c.37.1.8 (A:) cH-p21 R 95.0 0.027 2E-06 46.9 7.5 22 251-272 5-26 (166)
112 d1u94a1 c.37.1.11 (A:6-268) Re 94.9 0.011 8.3E-07 54.0 5.1 36 249-284 54-92 (263)
113 d1sq5a_ c.37.1.6 (A:) Pantothe 94.9 0.013 9.8E-07 54.7 5.6 40 246-285 77-121 (308)
114 d1jjva_ c.37.1.1 (A:) Dephosph 94.8 0.0072 5.2E-07 53.0 3.3 28 252-280 5-32 (205)
115 d2qtvb1 c.37.1.8 (B:24-189) SA 94.8 0.0075 5.5E-07 49.6 3.3 21 252-272 3-23 (166)
116 d1yksa1 c.37.1.14 (A:185-324) 94.8 0.028 2.1E-06 44.7 6.8 19 249-267 7-25 (140)
117 d1yrba1 c.37.1.10 (A:1-244) AT 94.8 0.0076 5.6E-07 53.5 3.5 29 252-280 3-33 (244)
118 d1vhta_ c.37.1.1 (A:) Dephosph 94.8 0.0078 5.7E-07 52.9 3.5 27 252-279 6-32 (208)
119 d1u0ja_ c.37.1.20 (A:) Rep 40 94.7 0.012 8.7E-07 53.9 4.8 28 249-276 104-131 (267)
120 d2vp4a1 c.37.1.1 (A:12-208) De 94.7 0.0071 5.2E-07 52.2 2.9 30 249-278 9-38 (197)
121 d1e0sa_ c.37.1.8 (A:) ADP-ribo 94.7 0.026 1.9E-06 47.5 6.5 23 250-272 13-35 (173)
122 d2fh5b1 c.37.1.8 (B:63-269) Si 94.6 0.0088 6.4E-07 52.1 3.5 23 250-272 1-23 (207)
123 d1upta_ c.37.1.8 (A:) ADP-ribo 94.6 0.0087 6.3E-07 49.6 3.3 22 251-272 7-28 (169)
124 d1uaaa1 c.37.1.19 (A:2-307) DE 94.4 0.0099 7.2E-07 54.7 3.4 17 250-266 15-31 (306)
125 d1u8za_ c.37.1.8 (A:) Ras-rela 94.4 0.047 3.4E-06 45.6 7.6 21 251-271 6-26 (168)
126 d1nn5a_ c.37.1.1 (A:) Thymidyl 94.4 0.0087 6.4E-07 52.7 2.8 30 252-281 6-38 (209)
127 d2fz4a1 c.37.1.19 (A:24-229) D 94.3 0.038 2.7E-06 48.2 7.0 62 217-293 68-130 (206)
128 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 94.3 0.011 8.3E-07 49.7 3.3 23 249-271 13-35 (186)
129 d1moza_ c.37.1.8 (A:) ADP-ribo 94.2 0.044 3.2E-06 46.3 7.1 23 249-271 17-39 (182)
130 d2a5ja1 c.37.1.8 (A:9-181) Rab 94.2 0.012 8.9E-07 49.7 3.3 21 252-272 6-26 (173)
131 d1wb9a2 c.37.1.12 (A:567-800) 94.1 0.045 3.3E-06 48.9 7.2 24 249-272 41-64 (234)
132 d1c1ya_ c.37.1.8 (A:) Rap1A {H 94.1 0.064 4.7E-06 44.5 7.8 22 251-272 5-26 (167)
133 d2p6ra3 c.37.1.19 (A:1-202) He 94.1 0.056 4E-06 46.6 7.5 18 250-267 41-58 (202)
134 d2a9ua1 a.118.23.1 (A:6-139) U 94.0 0.12 8.5E-06 41.8 8.8 80 49-129 27-112 (134)
135 d2ocpa1 c.37.1.1 (A:37-277) De 94.0 0.019 1.4E-06 51.1 4.2 30 249-278 2-31 (241)
136 d1nrjb_ c.37.1.8 (B:) Signal r 94.0 0.015 1.1E-06 50.3 3.5 22 251-272 5-26 (209)
137 d2awna2 c.37.1.12 (A:4-235) Ma 93.9 0.017 1.2E-06 51.7 3.7 26 249-274 26-51 (232)
138 d2onka1 c.37.1.12 (A:1-240) Mo 93.9 0.014 1E-06 52.5 3.1 23 252-274 27-49 (240)
139 d1nlfa_ c.37.1.11 (A:) Hexamer 93.9 0.015 1.1E-06 52.8 3.4 24 249-272 29-52 (274)
140 d1z2aa1 c.37.1.8 (A:8-171) Rab 93.9 0.016 1.1E-06 48.4 3.3 20 252-271 5-24 (164)
141 d1l2ta_ c.37.1.12 (A:) MJ0796 93.8 0.015 1.1E-06 52.0 3.2 25 249-273 31-55 (230)
142 d1zd9a1 c.37.1.8 (A:18-181) AD 93.8 0.016 1.2E-06 48.3 3.3 22 251-272 4-25 (164)
143 d1deka_ c.37.1.1 (A:) Deoxynuc 93.8 0.014 1E-06 52.0 3.1 33 251-285 3-35 (241)
144 d4tmka_ c.37.1.1 (A:) Thymidyl 93.8 0.017 1.2E-06 50.4 3.5 24 250-273 3-26 (210)
145 d1sgwa_ c.37.1.12 (A:) Putativ 93.7 0.014 1E-06 51.0 2.9 25 249-273 27-51 (200)
146 d3raba_ c.37.1.8 (A:) Rab3a {R 93.7 0.017 1.3E-06 48.5 3.3 21 252-272 8-28 (169)
147 d1kaoa_ c.37.1.8 (A:) Rap2a {H 93.6 0.018 1.3E-06 48.1 3.3 22 251-272 5-26 (167)
148 d1g2912 c.37.1.12 (1:1-240) Ma 93.6 0.016 1.2E-06 52.1 3.1 25 250-274 30-54 (240)
149 d1z0fa1 c.37.1.8 (A:8-173) Rab 93.6 0.019 1.4E-06 48.0 3.3 21 252-272 7-27 (166)
150 d1pjra1 c.37.1.19 (A:1-318) DE 93.6 0.018 1.3E-06 53.4 3.4 22 250-271 25-47 (318)
151 d1mkya1 c.37.1.8 (A:2-172) Pro 93.5 0.019 1.4E-06 48.2 3.2 21 251-271 2-22 (171)
152 d3b60a1 c.37.1.12 (A:329-581) 93.5 0.016 1.2E-06 52.6 3.0 27 248-274 40-66 (253)
153 d1gsia_ c.37.1.1 (A:) Thymidyl 93.5 0.019 1.4E-06 49.7 3.4 31 252-282 3-36 (208)
154 d2ew1a1 c.37.1.8 (A:4-174) Rab 93.5 0.018 1.3E-06 48.4 3.1 20 252-271 8-27 (171)
155 d1v43a3 c.37.1.12 (A:7-245) Hy 93.5 0.021 1.6E-06 51.2 3.7 26 249-274 32-57 (239)
156 d2f7sa1 c.37.1.8 (A:5-190) Rab 93.5 0.018 1.3E-06 49.1 3.1 20 252-271 8-27 (186)
157 d3dhwc1 c.37.1.12 (C:1-240) Me 93.5 0.014 1E-06 52.5 2.4 24 250-273 32-55 (240)
158 d1u0la2 c.37.1.8 (A:69-293) Pr 93.4 0.025 1.8E-06 50.3 3.9 31 250-280 96-126 (225)
159 d2f9la1 c.37.1.8 (A:8-182) Rab 93.4 0.021 1.5E-06 48.2 3.3 21 251-271 6-26 (175)
160 d2atva1 c.37.1.8 (A:5-172) Ras 93.4 0.021 1.5E-06 47.9 3.3 21 252-272 5-25 (168)
161 d3d31a2 c.37.1.12 (A:1-229) Su 93.4 0.014 1E-06 52.1 2.2 25 250-274 27-51 (229)
162 d1r0wa_ c.37.1.12 (A:) Cystic 93.3 0.018 1.3E-06 53.2 2.9 28 247-274 60-87 (281)
163 d1tmka_ c.37.1.1 (A:) Thymidyl 93.3 0.032 2.4E-06 49.0 4.6 33 250-282 4-36 (214)
164 d2cxxa1 c.37.1.8 (A:2-185) GTP 93.3 0.018 1.3E-06 48.7 2.8 22 251-272 2-23 (184)
165 d1mv5a_ c.37.1.12 (A:) Multidr 93.2 0.021 1.5E-06 51.5 3.1 27 247-273 26-52 (242)
166 d2erya1 c.37.1.8 (A:10-180) r- 93.2 0.022 1.6E-06 47.8 3.0 21 251-271 7-27 (171)
167 d1ky3a_ c.37.1.8 (A:) Rab-rela 93.1 0.024 1.7E-06 47.6 3.3 20 252-271 5-24 (175)
168 d1r2qa_ c.37.1.8 (A:) Rab5a {H 93.1 0.025 1.8E-06 47.5 3.3 22 251-272 8-29 (170)
169 d1g16a_ c.37.1.8 (A:) Rab-rela 93.1 0.023 1.7E-06 47.4 3.1 21 252-272 5-25 (166)
170 d1jj7a_ c.37.1.12 (A:) Peptide 93.1 0.023 1.7E-06 51.5 3.2 28 247-274 38-65 (251)
171 d2pmka1 c.37.1.12 (A:467-707) 93.1 0.022 1.6E-06 51.3 3.1 27 248-274 28-54 (241)
172 d1z08a1 c.37.1.8 (A:17-183) Ra 93.1 0.025 1.8E-06 47.2 3.3 20 252-271 6-25 (167)
173 d1fzqa_ c.37.1.8 (A:) ADP-ribo 93.0 0.021 1.5E-06 48.0 2.7 22 250-271 17-38 (176)
174 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 92.9 0.026 1.9E-06 47.9 3.3 20 252-271 5-24 (184)
175 d2p67a1 c.37.1.10 (A:1-327) LA 92.9 0.032 2.3E-06 52.6 4.1 36 249-284 54-94 (327)
176 d1xpua3 c.37.1.11 (A:129-417) 92.9 0.072 5.2E-06 48.9 6.5 24 250-273 44-67 (289)
177 d2erxa1 c.37.1.8 (A:6-176) di- 92.9 0.026 1.9E-06 47.3 3.1 20 252-271 5-24 (171)
178 d1z06a1 c.37.1.8 (A:32-196) Ra 92.9 0.028 2E-06 46.7 3.3 20 252-271 5-24 (165)
179 d1oxxk2 c.37.1.12 (K:1-242) Gl 92.8 0.019 1.4E-06 51.7 2.2 25 249-273 31-55 (242)
180 d1xtqa1 c.37.1.8 (A:3-169) GTP 92.8 0.027 2E-06 46.9 3.1 22 251-272 6-27 (167)
181 d1x3sa1 c.37.1.8 (A:2-178) Rab 92.7 0.03 2.2E-06 47.3 3.3 21 251-271 9-29 (177)
182 d2g6ba1 c.37.1.8 (A:58-227) Ra 92.7 0.031 2.2E-06 46.8 3.3 20 252-271 9-28 (170)
183 d2gj8a1 c.37.1.8 (A:216-376) P 92.7 0.027 2E-06 46.5 2.9 22 251-272 3-24 (161)
184 d2fn4a1 c.37.1.8 (A:24-196) r- 92.7 0.028 2.1E-06 47.3 3.0 22 251-272 8-29 (173)
185 d1e9ra_ c.37.1.11 (A:) Bacteri 92.6 0.04 2.9E-06 53.4 4.5 35 249-283 50-87 (433)
186 d1p5zb_ c.37.1.1 (B:) Deoxycyt 92.6 0.018 1.3E-06 51.0 1.8 29 250-278 3-31 (241)
187 d2qm8a1 c.37.1.10 (A:5-327) Me 92.6 0.038 2.8E-06 51.9 4.2 35 250-284 52-91 (323)
188 d1wmsa_ c.37.1.8 (A:) Rab9a {H 92.6 0.031 2.3E-06 46.9 3.3 22 251-272 8-29 (174)
189 d2bmea1 c.37.1.8 (A:6-179) Rab 92.6 0.03 2.2E-06 47.1 3.1 20 252-271 8-27 (174)
190 d1a7ja_ c.37.1.6 (A:) Phosphor 92.5 0.027 2E-06 51.9 2.9 35 251-285 6-43 (288)
191 d1ewqa2 c.37.1.12 (A:542-765) 92.5 0.13 9.6E-06 45.4 7.4 23 250-272 36-58 (224)
192 d1b0ua_ c.37.1.12 (A:) ATP-bin 92.4 0.031 2.3E-06 50.7 3.2 25 249-273 28-52 (258)
193 d1yzqa1 c.37.1.8 (A:14-177) Ra 92.4 0.032 2.4E-06 46.3 3.1 20 252-271 3-22 (164)
194 d2gjsa1 c.37.1.8 (A:91-258) Ra 92.4 0.029 2.1E-06 46.9 2.7 21 252-272 4-24 (168)
195 d1z0ja1 c.37.1.8 (A:2-168) Rab 92.4 0.036 2.6E-06 46.2 3.3 21 251-271 6-26 (167)
196 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 92.3 0.034 2.5E-06 46.8 3.1 22 251-272 4-25 (177)
197 d1svia_ c.37.1.8 (A:) Probable 92.2 0.031 2.3E-06 47.9 2.8 21 251-271 25-45 (195)
198 d1ihua1 c.37.1.10 (A:1-296) Ar 92.1 0.079 5.7E-06 48.1 5.6 37 247-283 6-45 (296)
199 d2bcgy1 c.37.1.8 (Y:3-196) GTP 92.0 0.038 2.8E-06 47.4 3.1 21 252-272 9-29 (194)
200 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 92.0 0.043 3.1E-06 45.8 3.3 22 251-272 5-26 (170)
201 d2g3ya1 c.37.1.8 (A:73-244) GT 91.9 0.041 3E-06 46.2 3.1 20 252-271 6-25 (172)
202 d1h65a_ c.37.1.8 (A:) Chloropl 91.8 0.03 2.2E-06 50.8 2.2 24 249-272 32-55 (257)
203 d1x1ra1 c.37.1.8 (A:10-178) Ra 91.8 0.046 3.3E-06 45.8 3.3 22 251-272 6-27 (169)
204 d2hyda1 c.37.1.12 (A:324-578) 91.7 0.026 1.9E-06 51.2 1.7 27 248-274 43-69 (255)
205 d1wf3a1 c.37.1.8 (A:3-180) GTP 91.7 0.045 3.3E-06 46.1 3.1 22 251-272 7-28 (178)
206 d1mh1a_ c.37.1.8 (A:) Rac {Hum 91.6 0.048 3.5E-06 46.2 3.3 22 251-272 7-28 (183)
207 d2fu5c1 c.37.1.8 (C:3-175) Rab 91.6 0.028 2E-06 47.3 1.6 20 252-271 9-28 (173)
208 g1f2t.1 c.37.1.12 (A:,B:) Rad5 91.6 0.04 2.9E-06 49.7 2.9 21 252-272 26-46 (292)
209 d1m7ba_ c.37.1.8 (A:) RhoE (RN 91.4 0.049 3.6E-06 46.1 3.1 21 252-272 5-25 (179)
210 d1i2ma_ c.37.1.8 (A:) Ran {Hum 91.2 0.026 1.9E-06 47.4 1.1 20 252-271 6-25 (170)
211 d2atxa1 c.37.1.8 (A:9-193) Rho 91.2 0.052 3.8E-06 46.1 3.0 21 252-272 12-32 (185)
212 d1ji0a_ c.37.1.12 (A:) Branche 91.2 0.044 3.2E-06 49.2 2.6 25 250-274 33-57 (240)
213 d2ngra_ c.37.1.8 (A:) CDC42 {H 91.0 0.056 4.1E-06 46.1 3.1 21 252-272 6-26 (191)
214 d1xzpa2 c.37.1.8 (A:212-371) T 90.9 0.02 1.5E-06 47.2 0.0 21 252-272 3-23 (160)
215 d1egaa1 c.37.1.8 (A:4-182) GTP 90.8 0.058 4.2E-06 45.1 2.9 21 251-271 7-27 (179)
216 d1vpla_ c.37.1.12 (A:) Putativ 90.7 0.063 4.6E-06 48.0 3.2 26 249-274 28-53 (238)
217 d1lnza2 c.37.1.8 (A:158-342) O 90.4 0.052 3.8E-06 45.9 2.2 21 251-271 3-23 (185)
218 d1g6ha_ c.37.1.12 (A:) MJ1267 90.2 0.059 4.3E-06 48.7 2.6 36 250-285 31-68 (254)
219 d1puia_ c.37.1.8 (A:) Probable 90.2 0.038 2.8E-06 46.3 1.1 23 249-271 16-38 (188)
220 d1mkya2 c.37.1.8 (A:173-358) P 90.1 0.077 5.6E-06 44.7 3.1 23 250-272 9-31 (186)
221 d1l7vc_ c.37.1.12 (C:) ABC tra 89.9 0.059 4.3E-06 47.9 2.3 24 249-272 25-48 (231)
222 d1udxa2 c.37.1.8 (A:157-336) O 89.8 0.058 4.2E-06 45.4 2.0 20 252-271 4-23 (180)
223 g1ii8.1 c.37.1.12 (A:,B:) Rad5 89.7 0.084 6.1E-06 48.3 3.3 22 250-271 24-45 (369)
224 d1qhla_ c.37.1.12 (A:) Cell di 89.6 0.025 1.8E-06 47.9 -0.6 23 251-273 26-48 (222)
225 d1zcba2 c.37.1.8 (A:47-75,A:20 89.4 0.088 6.4E-06 44.7 2.9 19 251-269 4-22 (200)
226 g1xew.1 c.37.1.12 (X:,Y:) Smc 89.2 0.078 5.7E-06 49.0 2.6 24 251-274 28-51 (329)
227 d1s2ma1 c.37.1.19 (A:46-251) P 89.1 0.068 5E-06 46.4 2.0 50 214-269 2-57 (206)
228 d1t9ha2 c.37.1.8 (A:68-298) Pr 88.6 0.035 2.6E-06 49.4 -0.3 29 249-277 97-125 (231)
229 d2bmja1 c.37.1.8 (A:66-240) Ce 88.5 0.13 9.2E-06 43.3 3.3 23 250-272 6-28 (175)
230 d1wp9a1 c.37.1.19 (A:1-200) pu 88.3 0.17 1.2E-05 43.0 4.0 42 250-291 24-70 (200)
231 d1byia_ c.37.1.10 (A:) Dethiob 88.1 0.22 1.6E-05 42.5 4.8 33 250-282 2-38 (224)
232 d1azta2 c.37.1.8 (A:35-65,A:20 87.6 0.13 9.7E-06 44.9 2.9 22 251-272 8-29 (221)
233 d1p6xa_ c.37.1.1 (A:) Thymidin 86.8 0.13 9.7E-06 48.2 2.6 24 251-274 8-31 (333)
234 d2eyqa3 c.37.1.19 (A:546-778) 86.8 0.49 3.6E-05 41.7 6.3 38 249-286 76-116 (233)
235 d1ihua2 c.37.1.10 (A:308-586) 86.8 0.3 2.2E-05 43.8 5.0 34 250-283 21-57 (279)
236 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 86.6 0.17 1.3E-05 42.5 3.1 22 251-272 4-25 (200)
237 d1nija1 c.37.1.10 (A:2-223) Hy 86.4 0.15 1.1E-05 44.8 2.5 24 250-273 4-27 (222)
238 d1e69a_ c.37.1.12 (A:) Smc hea 85.6 0.15 1.1E-05 46.5 2.2 24 251-274 26-49 (308)
239 d1gkub1 c.37.1.16 (B:1-250) He 85.3 0.39 2.8E-05 42.1 4.9 45 249-293 58-106 (237)
240 d1tjca_ a.118.8.1 (A:) Prolyl 85.3 0.55 4E-05 34.7 5.1 34 52-85 19-74 (95)
241 d1cp2a_ c.37.1.10 (A:) Nitroge 84.9 0.37 2.7E-05 43.0 4.6 34 250-283 2-38 (269)
242 d1bg2a_ c.37.1.9 (A:) Kinesin 84.9 0.17 1.2E-05 47.1 2.2 52 212-267 43-94 (323)
243 d1t6na_ c.37.1.19 (A:) Spliceo 84.6 0.16 1.2E-05 44.0 1.8 51 214-265 2-54 (207)
244 d1ry6a_ c.37.1.9 (A:) Kinesin 84.6 0.18 1.3E-05 47.1 2.2 51 213-266 52-102 (330)
245 d1goja_ c.37.1.9 (A:) Kinesin 84.5 0.21 1.6E-05 47.0 2.8 50 213-266 48-97 (354)
246 d1w1wa_ c.37.1.12 (A:) Smc hea 84.2 0.26 1.9E-05 46.7 3.4 23 252-274 28-50 (427)
247 d1osna_ c.37.1.1 (A:) Thymidin 84.1 0.21 1.5E-05 46.7 2.4 24 252-275 8-31 (331)
248 d1tq4a_ c.37.1.8 (A:) Interfer 83.4 0.3 2.2E-05 46.8 3.4 23 249-271 56-78 (400)
249 d1svsa1 c.37.1.8 (A:32-60,A:18 83.0 0.31 2.2E-05 40.7 2.9 21 251-271 4-24 (195)
250 d2j0sa1 c.37.1.19 (A:22-243) P 82.5 0.3 2.2E-05 42.7 2.8 52 212-264 16-69 (222)
251 d1j3ba1 c.91.1.1 (A:212-529) P 82.5 0.22 1.6E-05 46.1 1.8 18 250-267 15-32 (318)
252 d1veca_ c.37.1.19 (A:) DEAD bo 81.7 0.18 1.3E-05 43.6 1.0 51 213-264 3-55 (206)
253 d1e2ka_ c.37.1.1 (A:) Thymidin 81.7 0.27 2E-05 45.8 2.2 24 252-275 7-30 (329)
254 d1gm5a3 c.37.1.19 (A:286-549) 81.2 0.69 5E-05 41.5 4.8 37 249-285 104-143 (264)
255 d2olra1 c.91.1.1 (A:228-540) P 81.0 0.3 2.2E-05 44.9 2.2 18 250-267 15-32 (313)
256 d2jdid3 c.37.1.11 (D:82-357) C 80.9 0.4 2.9E-05 43.4 3.0 23 250-272 69-91 (276)
257 d1x88a1 c.37.1.9 (A:18-362) Ki 79.9 0.35 2.5E-05 45.3 2.3 50 213-266 49-98 (345)
258 d1qdea_ c.37.1.19 (A:) Initiat 79.3 1.2 8.7E-05 38.3 5.6 53 212-266 9-64 (212)
259 d1v8ka_ c.37.1.9 (A:) Kinesin 79.2 0.31 2.3E-05 46.0 1.7 50 213-266 82-131 (362)
260 d1wb1a4 c.37.1.8 (A:1-179) Elo 78.7 0.54 4E-05 39.1 3.0 22 251-272 7-28 (179)
261 d1f9va_ c.37.1.9 (A:) Kinesin 78.6 0.5 3.6E-05 44.1 3.0 49 213-266 52-100 (342)
262 d2afhe1 c.37.1.10 (E:1-289) Ni 78.4 0.84 6.1E-05 41.0 4.5 33 251-283 4-39 (289)
263 d1sdma_ c.37.1.9 (A:) Kinesin 78.3 0.36 2.6E-05 45.6 1.9 49 213-266 44-92 (364)
264 d1ii2a1 c.91.1.1 (A:201-523) P 78.3 0.41 3E-05 44.2 2.2 18 250-267 15-32 (323)
265 d1t5la1 c.37.1.19 (A:2-414) Nu 78.0 1.9 0.00014 41.0 7.2 57 215-284 10-66 (413)
266 d2dy1a2 c.37.1.8 (A:8-274) Elo 77.8 0.68 5E-05 41.6 3.6 25 250-274 3-27 (267)
267 d1q0ua_ c.37.1.19 (A:) Probabl 77.8 0.71 5.2E-05 39.3 3.6 49 214-265 2-54 (209)
268 d1hv8a1 c.37.1.19 (A:3-210) Pu 77.5 0.59 4.3E-05 40.1 2.9 60 213-272 4-65 (208)
269 d2g9na1 c.37.1.19 (A:21-238) I 77.2 1.5 0.00011 37.8 5.6 51 213-266 12-66 (218)
270 d2bv3a2 c.37.1.8 (A:7-282) Elo 76.9 0.73 5.3E-05 41.7 3.4 25 250-274 7-31 (276)
271 d2bmfa2 c.37.1.14 (A:178-482) 76.7 0.87 6.4E-05 40.8 4.0 18 247-264 7-24 (305)
272 d1hyqa_ c.37.1.10 (A:) Cell di 76.4 1.3 9.4E-05 37.9 5.0 31 252-282 4-38 (232)
273 d1elra_ a.118.8.1 (A:) Hop {Hu 76.1 1.5 0.00011 34.0 4.8 38 49-86 15-67 (128)
274 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 76.0 0.65 4.7E-05 46.3 3.2 22 250-271 25-47 (623)
275 d1g8fa3 c.37.1.15 (A:390-511) 75.8 0.92 6.7E-05 35.5 3.3 24 250-273 7-30 (122)
276 d2fbna1 a.118.8.1 (A:22-174) P 75.0 1.6 0.00012 35.0 4.9 36 54-89 14-49 (153)
277 d1zu2a1 a.118.8.1 (A:1-145) Mi 74.7 3.4 0.00025 32.6 6.9 46 51-96 54-118 (145)
278 d1c4oa1 c.37.1.19 (A:2-409) Nu 74.1 2.9 0.00021 39.7 7.2 35 250-284 29-63 (408)
279 d1rifa_ c.37.1.23 (A:) DNA hel 73.5 1.5 0.00011 39.5 4.7 60 218-292 112-176 (282)
280 d2ncda_ c.37.1.9 (A:) Kinesin 73.3 0.48 3.5E-05 44.8 1.2 49 213-266 94-142 (368)
281 d1g3qa_ c.37.1.10 (A:) Cell di 72.3 2 0.00014 36.7 5.1 32 251-282 4-39 (237)
282 d2c78a3 c.37.1.8 (A:9-212) Elo 72.2 0.94 6.8E-05 38.8 2.8 26 248-273 2-27 (204)
283 d1oywa2 c.37.1.19 (A:1-206) Re 71.8 1.9 0.00014 36.2 4.9 32 250-281 41-72 (206)
284 d2b8ta1 c.37.1.24 (A:11-149) T 71.0 2.1 0.00016 34.1 4.6 31 253-283 6-39 (139)
285 d2jdia3 c.37.1.11 (A:95-379) C 70.4 0.99 7.2E-05 40.9 2.6 23 250-272 69-91 (285)
286 d2zfia1 c.37.1.9 (A:4-352) Kin 68.8 1.8 0.00013 40.2 4.2 18 249-266 87-104 (349)
287 d1g7sa4 c.37.1.8 (A:1-227) Ini 68.2 1.6 0.00012 37.7 3.5 22 252-273 8-29 (227)
288 d1elwa_ a.118.8.1 (A:) Hop {Hu 68.0 3.2 0.00023 31.3 5.0 18 52-69 17-34 (117)
289 d1a17a_ a.118.8.1 (A:) Protein 67.6 3.1 0.00023 33.1 5.1 33 54-86 7-39 (159)
290 d1kt1a1 a.118.8.1 (A:254-421) 67.1 4 0.00029 32.9 5.7 36 54-89 12-47 (168)
291 d1puja_ c.37.1.8 (A:) Probable 64.8 3.2 0.00023 36.8 5.0 58 214-272 78-135 (273)
292 d1hh8a_ a.118.8.1 (A:) Neutrop 63.7 2.8 0.00021 34.8 4.2 41 46-86 44-99 (192)
293 d2hr2a1 a.118.8.8 (A:2-157) Hy 63.3 6.7 0.00049 30.9 6.4 42 53-94 24-92 (156)
294 d1z63a1 c.37.1.19 (A:432-661) 62.9 4.2 0.0003 34.8 5.3 46 249-294 31-81 (230)
295 d1fx0a3 c.37.1.11 (A:97-372) C 62.7 1.4 0.0001 39.7 1.9 23 250-272 68-90 (276)
296 d1c9ka_ c.37.1.11 (A:) Adenosy 62.6 2.7 0.0002 35.1 3.7 28 252-280 2-29 (180)
297 d1elwa_ a.118.8.1 (A:) Hop {Hu 62.4 3.5 0.00025 31.1 4.1 30 57-86 3-32 (117)
298 d1lkxa_ c.37.1.9 (A:) Myosin S 61.8 2.2 0.00016 43.4 3.6 25 249-273 86-110 (684)
299 d2hr2a1 a.118.8.8 (A:2-157) Hy 61.0 4.9 0.00036 31.8 5.1 30 62-91 105-134 (156)
300 d1d0xa2 c.37.1.9 (A:2-33,A:80- 61.0 2.4 0.00017 43.4 3.6 25 249-273 125-149 (712)
301 d1a17a_ a.118.8.1 (A:) Protein 60.6 4.9 0.00036 31.7 5.0 16 54-69 26-41 (159)
302 d1br2a2 c.37.1.9 (A:80-789) My 59.4 2.6 0.00019 43.1 3.6 25 249-273 91-115 (710)
303 d1p5qa1 a.118.8.1 (A:258-427) 59.0 19 0.0014 28.6 8.6 38 48-85 72-124 (170)
304 d1f5na2 c.37.1.8 (A:7-283) Int 58.6 2.3 0.00017 38.1 2.7 25 248-272 31-55 (277)
305 d2mysa2 c.37.1.9 (A:4-33,A:80- 58.4 2.6 0.00019 43.7 3.4 25 249-273 123-147 (794)
306 d1w7ja2 c.37.1.9 (A:63-792) My 58.0 2.8 0.00021 42.9 3.6 25 249-273 94-118 (730)
307 d1xnfa_ a.118.8.1 (A:) Lipopro 57.8 5.1 0.00037 33.8 4.9 18 51-68 50-67 (259)
308 d1hxia_ a.118.8.1 (A:) Peroxin 57.7 6.7 0.00049 29.1 5.0 40 46-85 24-78 (112)
309 d2c2la1 a.118.8.1 (A:24-224) S 57.4 4.2 0.0003 33.0 4.1 38 48-85 48-100 (201)
310 d1elra_ a.118.8.1 (A:) Hop {Hu 55.5 6.9 0.00051 29.7 4.9 31 56-86 3-33 (128)
311 d1tjca_ a.118.8.1 (A:) Prolyl 55.2 7.3 0.00053 28.0 4.7 33 58-90 6-38 (95)
312 d1ihga1 a.118.8.1 (A:197-365) 55.2 12 0.00086 29.7 6.6 35 57-91 27-61 (169)
313 d1kk8a2 c.37.1.9 (A:1-28,A:77- 55.1 3.3 0.00024 42.9 3.5 25 249-273 121-145 (789)
314 d2e2aa_ a.7.2.1 (A:) Enzyme II 54.9 21 0.0015 26.5 7.3 45 46-90 9-53 (104)
315 d1vp7a_ a.7.13.1 (A:) Exonucle 54.7 28 0.002 23.7 8.7 35 54-88 8-44 (68)
316 d1w36b1 c.37.1.19 (B:1-485) Ex 54.2 3 0.00022 39.5 2.9 23 250-272 17-40 (485)
317 d2qn6a3 c.37.1.8 (A:2-206) Ini 52.1 4.6 0.00034 33.8 3.5 25 247-271 6-30 (205)
318 d1fcha_ a.118.8.1 (A:) Peroxin 52.0 11 0.00078 32.8 6.3 15 54-68 222-236 (323)
319 d2ff4a2 a.118.8.3 (A:105-283) 51.8 8.9 0.00065 31.3 5.3 43 54-96 83-140 (179)
320 d1n0ua2 c.37.1.8 (A:3-343) Elo 51.5 3.3 0.00024 38.2 2.6 26 249-274 17-42 (341)
321 d1wrba1 c.37.1.19 (A:164-401) 50.7 3.2 0.00024 36.0 2.3 15 250-264 59-73 (238)
322 d1nzna_ a.118.8.1 (A:) Mitocho 49.6 5.4 0.00039 30.5 3.2 12 55-66 53-64 (122)
323 d1tafb_ a.22.1.3 (B:) TAF(II)6 48.8 14 0.00098 25.5 4.8 56 379-449 13-69 (70)
324 d2akab1 c.37.1.8 (B:6-304) Dyn 48.4 9.2 0.00067 33.7 5.2 22 251-272 28-49 (299)
325 d1d2ea3 c.37.1.8 (A:55-250) El 48.0 5 0.00037 33.7 3.0 24 249-272 3-26 (196)
326 d1zu2a1 a.118.8.1 (A:1-145) Mi 47.6 8 0.00058 30.2 4.1 43 49-91 97-140 (145)
327 d1ihga1 a.118.8.1 (A:197-365) 46.6 8.3 0.0006 30.7 4.1 19 51-69 90-108 (169)
328 d1wlza1 a.39.1.7 (A:229-311) D 46.3 25 0.0018 24.2 6.5 32 433-464 31-62 (83)
329 d1ug7a_ a.24.24.1 (A:) Domain 46.2 54 0.004 24.6 8.5 46 49-94 11-56 (128)
330 d1ni3a1 c.37.1.8 (A:11-306) Yc 46.1 4 0.00029 36.6 2.2 31 252-282 13-48 (296)
331 d1p5qa1 a.118.8.1 (A:258-427) 45.9 11 0.00077 30.2 4.7 33 56-88 12-44 (170)
332 d2fbna1 a.118.8.1 (A:22-174) P 44.9 12 0.00084 29.4 4.8 18 52-69 81-98 (153)
333 d1zunb3 c.37.1.8 (B:16-237) Su 44.2 7.8 0.00057 33.1 3.7 26 250-275 10-35 (222)
334 d1wxqa1 c.37.1.8 (A:1-319) GTP 43.9 5.3 0.00039 35.9 2.7 19 252-270 3-21 (319)
335 d1ufba_ a.24.16.3 (A:) Hypothe 43.8 18 0.0013 27.7 5.6 42 50-91 4-45 (127)
336 d1qqea_ a.118.8.1 (A:) Vesicul 43.3 14 0.001 32.1 5.5 22 67-88 87-108 (290)
337 d2axpa1 c.37.1.1 (A:2-165) Hyp 43.0 12 0.00088 28.0 4.1 31 252-282 3-33 (164)
338 d1jnya3 c.37.1.8 (A:4-227) Elo 42.4 7.2 0.00053 33.2 3.2 27 248-274 2-28 (224)
339 d1xbta1 c.37.1.24 (A:18-150) T 41.7 13 0.00096 28.8 4.5 31 252-282 5-38 (133)
340 d1jwyb_ c.37.1.8 (B:) Dynamin 41.6 6.3 0.00046 35.1 2.8 22 251-272 26-47 (306)
341 d1o3ua_ a.24.16.3 (A:) Hypothe 41.2 22 0.0016 27.1 5.7 39 53-91 3-41 (126)
342 d1kk1a3 c.37.1.8 (A:6-200) Ini 41.1 6.4 0.00047 32.5 2.6 22 250-271 6-27 (195)
343 d1hh8a_ a.118.8.1 (A:) Neutrop 40.3 18 0.0013 29.4 5.4 24 62-85 41-64 (192)
344 d2c2la1 a.118.8.1 (A:24-224) S 40.0 14 0.00099 29.5 4.6 20 50-69 16-35 (201)
345 d1xx6a1 c.37.1.24 (A:2-142) Th 39.3 15 0.0011 28.8 4.5 31 252-282 10-43 (141)
346 d1kjwa2 c.37.1.1 (A:526-724) G 38.6 11 0.00083 31.3 3.8 26 249-277 9-34 (199)
347 d1jala1 c.37.1.8 (A:1-278) Ych 37.6 8 0.00058 34.1 2.8 21 251-271 4-24 (278)
348 d1htaa_ a.22.1.2 (A:) Archaeal 37.5 52 0.0038 21.8 8.0 49 388-451 20-68 (68)
349 d1wfda_ a.7.14.1 (A:) Hypothet 36.9 5 0.00036 29.4 1.0 52 79-130 30-81 (93)
350 d1qqea_ a.118.8.1 (A:) Vesicul 36.7 23 0.0017 30.5 5.9 37 54-90 33-70 (290)
351 d2pqrb1 a.118.8.1 (B:5-128) Mi 35.7 25 0.0018 27.0 5.1 46 51-96 51-105 (124)
352 d1z3ix2 c.37.1.19 (X:92-389) R 35.2 19 0.0014 31.7 5.0 51 248-298 78-138 (298)
353 d1klxa_ a.118.18.1 (A:) Cystei 34.6 28 0.0021 26.1 5.5 34 51-84 6-50 (133)
354 d1kt1a1 a.118.8.1 (A:254-421) 34.0 28 0.002 27.3 5.6 23 47-69 73-95 (168)
355 d1rw1a_ c.47.1.12 (A:) Hypothe 33.4 22 0.0016 26.5 4.4 31 252-282 2-32 (114)
356 d1f60a3 c.37.1.8 (A:2-240) Elo 33.3 11 0.0008 32.5 2.9 26 250-275 7-32 (239)
357 d1h75a_ c.47.1.1 (A:) Glutared 32.3 25 0.0018 23.9 4.3 32 252-283 3-34 (76)
358 d1hz4a_ a.118.8.2 (A:) Transcr 32.1 26 0.0019 29.7 5.4 36 52-87 26-81 (366)
359 d1xnfa_ a.118.8.1 (A:) Lipopro 31.8 23 0.0017 29.2 4.9 32 55-86 35-66 (259)
360 d1nzna_ a.118.8.1 (A:) Mitocho 30.3 31 0.0022 25.8 4.9 27 59-85 74-100 (122)
361 d1r7ha_ c.47.1.1 (A:) Glutared 29.6 30 0.0022 23.2 4.3 33 251-283 2-34 (74)
362 d1hxia_ a.118.8.1 (A:) Peroxin 28.4 26 0.0019 25.5 4.0 26 61-86 20-45 (112)
363 d1vh6a_ a.24.19.1 (A:) Flagell 27.9 50 0.0036 23.9 5.6 40 50-89 7-46 (102)
364 d1r5ba3 c.37.1.8 (A:215-459) E 27.9 12 0.00089 32.3 2.2 27 248-274 23-49 (245)
365 d1aipc1 a.5.2.2 (C:2-53) Elong 27.9 32 0.0024 22.0 3.8 39 43-82 2-40 (52)
366 d2jbwa1 c.69.1.41 (A:8-367) 2, 27.9 58 0.0043 29.0 7.3 43 49-91 34-76 (360)
367 d1p3da1 c.5.1.1 (A:11-106) UDP 25.4 33 0.0024 24.7 4.0 33 249-285 8-40 (96)
368 d2huec1 a.22.1.1 (C:20-101) Hi 23.4 38 0.0028 23.7 3.9 48 389-451 27-74 (82)
369 d1o5za2 c.72.2.2 (A:-2-293) Fo 23.1 15 0.0011 32.4 1.9 47 219-278 24-73 (296)
370 d2h6fa1 a.118.6.1 (A:55-369) P 23.0 20 0.0014 31.7 2.7 36 51-86 91-141 (315)
371 d1r5aa2 c.47.1.5 (A:2-86) Clas 22.8 49 0.0036 22.9 4.5 30 252-281 2-31 (85)
372 d1w3ba_ a.118.8.1 (A:) O-GlcNA 22.7 44 0.0032 28.6 5.2 35 51-85 12-61 (388)
373 d2h6fa1 a.118.6.1 (A:55-369) P 21.6 26 0.0019 30.8 3.3 44 43-86 48-107 (315)
374 d1ya0a1 a.118.8.1 (A:1-497) SM 21.4 35 0.0026 32.1 4.5 17 52-68 166-182 (497)
375 d2ff4a2 a.118.8.3 (A:105-283) 20.4 41 0.003 26.9 4.0 31 56-86 10-40 (179)
376 d1unda_ a.14.1.1 (A:) Advillin 20.0 37 0.0027 19.9 2.6 26 439-469 2-27 (36)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.1e-40 Score=314.21 Aligned_cols=230 Identities=35% Similarity=0.582 Sum_probs=196.6
Q ss_pred cCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcC-CCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccc
Q 012000 208 DRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLT 286 (473)
Q Consensus 208 ~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~-~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~ 286 (473)
+..++++|+||+|++++|++|++.+.+ +.+++.|... ..+++++|||||||||||++|+++|++++.+++.++++++.
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~ 82 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 82 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSST
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhh
Confidence 456889999999999999999998764 7778888765 46679999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhc-----------ceeeeeccccccc---c---CcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCC
Q 012000 287 SKWVGEGEKLVR-----------TLFMIDSIMSTRM---A---NENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKP 349 (473)
Q Consensus 287 ~~~~g~~~~~~~-----------~if~IDei~~~~~---~---~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~ 349 (473)
++|+|+++..++ ++++|||++.... . ..+....++++.|+..|+++.. ..+|+||||||+|
T Consensus 83 ~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~v~vIatTn~~ 160 (256)
T d1lv7a_ 83 EMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG--NEGIIVIAATNRP 160 (256)
T ss_dssp TSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS--SSCEEEEEEESCT
T ss_pred hcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCCc
Confidence 999998876654 4666888875322 2 2234456788999999998854 4569999999999
Q ss_pred CCCCHHHhc--ccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhccc
Q 012000 350 QELDDAVLR--RLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTN 427 (473)
Q Consensus 350 ~~Ld~al~r--Rf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~ 427 (473)
+.||++++| ||++.|+|++|+.++|..||+.++.+.++. .+.++..|++.|+||+++||.++|++|+..++++.
T Consensus 161 ~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~--- 236 (256)
T d1lv7a_ 161 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANLVNEAALFAARGN--- 236 (256)
T ss_dssp TTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT---
T ss_pred ccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcC-cccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcC---
Confidence 999999998 999999999999999999999999988776 78899999999999999999999999999988752
Q ss_pred ccccccccCCCCcHHHHHHHHHhhC
Q 012000 428 ILTVKANQLRPLRYEDFQKAMAVIR 452 (473)
Q Consensus 428 ~~~~~~~~~~~it~~df~~al~~~~ 452 (473)
...|+++||++|++++-
T Consensus 237 --------~~~i~~~d~~~Al~rv~ 253 (256)
T d1lv7a_ 237 --------KRVVSMVEFEKAKDKIM 253 (256)
T ss_dssp --------CSSBCHHHHHHHHHHHT
T ss_pred --------CCccCHHHHHHHHHHHh
Confidence 25689999999999864
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.1e-39 Score=311.66 Aligned_cols=225 Identities=36% Similarity=0.595 Sum_probs=193.5
Q ss_pred CCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcC-CCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch
Q 012000 209 RSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287 (473)
Q Consensus 209 ~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~-~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~ 287 (473)
+.|+++|+||+|++++|+.|++.+. ++.+++.|..+ ..+++|+|||||||||||++|+++|++++.+++.++++++.+
T Consensus 2 ~~p~~~~~di~G~~~~k~~l~~~i~-~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 2 EAPKVTFKDVAGAEEAKEELKEIVE-FLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp CCCSCCGGGCCSCHHHHHHHHHHHH-HHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CCCCCcHHHHccHHHHHHHHHHHHH-HHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhh
Confidence 4689999999999999999998765 57888888765 466789999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhc-----------ceeeeeccccccc---c---CcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCC
Q 012000 288 KWVGEGEKLVR-----------TLFMIDSIMSTRM---A---NENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQ 350 (473)
Q Consensus 288 ~~~g~~~~~~~-----------~if~IDei~~~~~---~---~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~ 350 (473)
+|+|++++.++ .|++|||++.... . ..+....++++.|+..|+++.. +.+|+||+|||+|+
T Consensus 81 ~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK--DTAIVVMAATNRPD 158 (247)
T ss_dssp SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT--TCCEEEEEEESCGG
T ss_pred ccccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCCcc
Confidence 99998876653 4666898875432 1 2334456788999999998854 45699999999999
Q ss_pred CCCHHHhc--ccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccc
Q 012000 351 ELDDAVLR--RLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNI 428 (473)
Q Consensus 351 ~Ld~al~r--Rf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~ 428 (473)
.||++++| ||+++|+|++|+.++|..||+.++.+..+. .+.+++.||+.|+||+++||.++|++|+..++++-
T Consensus 159 ~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~---- 233 (247)
T d1ixza_ 159 ILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLA-EDVDLALLAKRTPGFVGADLENLLNEAALLAAREG---- 233 (247)
T ss_dssp GSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT----
T ss_pred ccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCc-cccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcC----
Confidence 99999997 999999999999999999999999887665 67789999999999999999999999999988762
Q ss_pred cccccccCCCCcHHHHHHHH
Q 012000 429 LTVKANQLRPLRYEDFQKAM 448 (473)
Q Consensus 429 ~~~~~~~~~~it~~df~~al 448 (473)
.+.|+++||++|+
T Consensus 234 -------~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 234 -------RRKITMKDLEEAA 246 (247)
T ss_dssp -------CSSBCHHHHHHHT
T ss_pred -------CCCcCHHHHHHhh
Confidence 2569999999986
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=6.4e-40 Score=315.75 Aligned_cols=235 Identities=36% Similarity=0.598 Sum_probs=199.2
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCC-CCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchhhhh
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVG 291 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~-~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~~~g 291 (473)
|+|+||+|++++|+.|++.+.+|+.+++.|...+ .+++|+|||||||||||++|+++|++++.+++.++++++.+.|+|
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g 80 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 80 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccc
Confidence 6899999999999999999999999999998764 677899999999999999999999999999999999999998888
Q ss_pred hhhhhhc-----------ceeeeecccccc---ccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCCCHHHh
Q 012000 292 EGEKLVR-----------TLFMIDSIMSTR---MANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQELDDAVL 357 (473)
Q Consensus 292 ~~~~~~~-----------~if~IDei~~~~---~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~Ld~al~ 357 (473)
+....++ .+++||+++... ....++...++...++..+++... ..+|+||+|||+|+.+|++++
T Consensus 81 ~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~vlvi~tTn~~~~ld~al~ 158 (258)
T d1e32a2 81 ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ--RAHVIVMAATNRPNSIDPALR 158 (258)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCC--SSCEEEEEEESCGGGSCGGGT
T ss_pred cHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccc--cCCccEEEeCCCccccchhhh
Confidence 7655553 566688887643 344555667788889988887753 456999999999999999999
Q ss_pred c--ccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccc------c
Q 012000 358 R--RLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNI------L 429 (473)
Q Consensus 358 r--Rf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~------~ 429 (473)
| ||++.|+|++|+.++|..||+.++.+..+. .+.++..||+.|+||||+||.++|++|++.|+++..... .
T Consensus 159 r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~~ 237 (258)
T d1e32a2 159 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 237 (258)
T ss_dssp STTSSCEEEECCCCCHHHHHHHHHHTTTTSCBC-TTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCC
T ss_pred hcccccceeECCCCCHHHHHHHhhhhccCcccc-cccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccccchhhhhh
Confidence 9 999999999999999999999999877654 567899999999999999999999999999998754311 1
Q ss_pred ccccccCCCCcHHHHHHHHHh
Q 012000 430 TVKANQLRPLRYEDFQKAMAV 450 (473)
Q Consensus 430 ~~~~~~~~~it~~df~~al~~ 450 (473)
........+|+++||+.||.+
T Consensus 238 ~~~~~~~~~it~~Df~~AL~~ 258 (258)
T d1e32a2 238 DAEVMNSLAVTMDDFRWALSQ 258 (258)
T ss_dssp BHHHHHHCCBCHHHHHHHHTC
T ss_pred hhhhhccCccCHHHHHHHhCc
Confidence 111222357999999999863
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.6e-37 Score=297.44 Aligned_cols=214 Identities=41% Similarity=0.733 Sum_probs=178.7
Q ss_pred CCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCC-CCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchh
Q 012000 210 SPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK 288 (473)
Q Consensus 210 ~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~-~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~ 288 (473)
.|.++|+||+|++++|++|.+.+.+|+.+++.+...+ .+++|||||||||||||+||+++|.+++.+++.++++++.+.
T Consensus 1 ~p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~ 80 (265)
T d1r7ra3 1 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 80 (265)
T ss_dssp CCCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTS
T ss_pred CCCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhc
Confidence 4789999999999999999999999999999888764 567899999999999999999999999999999999999888
Q ss_pred hhhhhhhhhc-----------ceeeeecccccccc------CcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCC
Q 012000 289 WVGEGEKLVR-----------TLFMIDSIMSTRMA------NENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQE 351 (473)
Q Consensus 289 ~~g~~~~~~~-----------~if~IDei~~~~~~------~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~ 351 (473)
|.+..+..++ ++++||+++..... .......++++.|+..|+++.. ..+++||||||.++.
T Consensus 81 ~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~--~~~v~vi~ttn~~~~ 158 (265)
T d1r7ra3 81 WFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST--KKNVFIIGATNRPDI 158 (265)
T ss_dssp CTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------CCEEEECCBSCTT
T ss_pred cccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCC--CCCEEEEEeCCCchh
Confidence 8887766554 56668888754421 1223445688999999998864 345999999999999
Q ss_pred CCHHHhc--ccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcc
Q 012000 352 LDDAVLR--RLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGT 426 (473)
Q Consensus 352 Ld~al~r--Rf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~ 426 (473)
||++++| ||++.|+|++|+.++|..||+.++++.... .+.++..|+..|+||+++||.++|++|...|+++...
T Consensus 159 ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~~~ 234 (265)
T d1r7ra3 159 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 234 (265)
T ss_dssp TSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC--
T ss_pred CCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCch-hhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999876554 5678999999999999999999999999999987543
No 5
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.92 E-value=7.4e-24 Score=199.77 Aligned_cols=214 Identities=18% Similarity=0.172 Sum_probs=161.3
Q ss_pred CCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchhhh
Q 012000 211 PSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWV 290 (473)
Q Consensus 211 ~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~~~ 290 (473)
+|.+|+||+|++++++.|++++..+... ..+.+++|||||||||||++|+++|++++.++..+++.+.....-
T Consensus 4 RP~~~~divGqe~~~~~l~~~i~~~~~~-------~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~~~ 76 (238)
T d1in4a2 4 RPKSLDEFIGQENVKKKLSLALEAAKMR-------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGD 76 (238)
T ss_dssp SCSSGGGCCSCHHHHHHHHHHHHHHHHH-------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHH
T ss_pred CCCcHHHcCChHHHHHHHHHHHHHHHhc-------CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccHHH
Confidence 5789999999999999999998654321 233568999999999999999999999999999999877643210
Q ss_pred --h-hhhhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcC--------------CCCCCcEEEEeecCCCCCCC
Q 012000 291 --G-EGEKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVT--------------SNPNDLVIVMGATNKPQELD 353 (473)
Q Consensus 291 --g-~~~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~--------------~~~~~~v~vI~tTn~~~~Ld 353 (473)
. ......+.+++||+++.... .....++..++... .....++++|++||.+..++
T Consensus 77 ~~~~~~~~~~~~~~~ide~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~~~ 148 (238)
T d1in4a2 77 MAAILTSLERGDVLFIDEIHRLNK--------AVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLS 148 (238)
T ss_dssp HHHHHHHCCTTCEEEEETGGGCCH--------HHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGGGSC
T ss_pred HHHHHHhhccCCchHHHHHHHhhh--------HHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcccc
Confidence 0 01112246677898865432 22222333222110 01234689999999999999
Q ss_pred HHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhccccccccc
Q 012000 354 DAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVKA 433 (473)
Q Consensus 354 ~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~ 433 (473)
+++++||...+.++.|+..++..+++.++...++.+++..+..++..+.| +.+.+.++++.+...+...
T Consensus 149 ~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~~~---------- 217 (238)
T d1in4a2 149 SPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLTVV---------- 217 (238)
T ss_dssp HHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHH----------
T ss_pred ccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHh----------
Confidence 99999999999999999999999999999999999999999999999988 6777778888776555333
Q ss_pred ccCCCCcHHHHHHHHHhh
Q 012000 434 NQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 434 ~~~~~it~~df~~al~~~ 451 (473)
....||.+++.++++.+
T Consensus 218 -~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 218 -KADRINTDIVLKTMEVL 234 (238)
T ss_dssp -TCSSBCHHHHHHHHHHH
T ss_pred -cCCccCHHHHHHHHHhh
Confidence 12358999999998764
No 6
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.90 E-value=1.1e-22 Score=191.84 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=158.9
Q ss_pred CCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchhh-
Q 012000 211 PSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKW- 289 (473)
Q Consensus 211 ~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~~- 289 (473)
+|.+|+||+|++++++.|+.++..... ...+++++|||||||||||++|+++|++++.++..++++......
T Consensus 4 RP~~~ddivGq~~~~~~L~~~i~~~~~-------~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~~~ 76 (239)
T d1ixsb2 4 RPKTLDEYIGQERLKQKLRVYLEAAKA-------RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGD 76 (239)
T ss_dssp CCCSGGGSCSCHHHHHHHHHHHHHHTT-------SSSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSHHH
T ss_pred CCCCHHHhCCHHHHHHHHHHHHHHHHh-------cCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccchh
Confidence 688999999999999999999864322 234567999999999999999999999999999999988764421
Q ss_pred -hhhhhhh--hcceeeeeccccccccCcchHHHHHHHHHHHHhcCc-----C---------CCCCCcEEEEeecCCCCCC
Q 012000 290 -VGEGEKL--VRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGV-----T---------SNPNDLVIVMGATNKPQEL 352 (473)
Q Consensus 290 -~g~~~~~--~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~-----~---------~~~~~~v~vI~tTn~~~~L 352 (473)
....... ...+++||+++.... .....++..|+.. . .....++++|++||++...
T Consensus 77 ~~~~~~~~~~~~~i~~iDe~~~~~~--------~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 148 (239)
T d1ixsb2 77 LAAILANSLEEGDILFIDEIHRLSR--------QAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLI 148 (239)
T ss_dssp HHHHHHTTCCTTCEEEEETGGGCCH--------HHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSSC
T ss_pred hHHHHHhhccCCCeeeeecccccch--------hHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCcccc
Confidence 1111111 135778999965432 2222333333211 0 0112357888999999988
Q ss_pred CHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccccccc
Q 012000 353 DDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVK 432 (473)
Q Consensus 353 d~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~ 432 (473)
+++.++|+...+.+..|+.+++..++...+...++.++++.++.++..+.| ..++..++++.+...+ .
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~~~l~~~~~~a--~--------- 216 (239)
T d1ixsb2 149 TAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAKRLFRRVRDFA--Q--------- 216 (239)
T ss_dssp SCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHHHHHHHHHHHH--T---------
T ss_pred cchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCC-CHHHHHHHHHHHHHHH--H---------
Confidence 888899888889999999999999999999999999999999999999999 5566666777654332 1
Q ss_pred cccCCCCcHHHHHHHHHhh
Q 012000 433 ANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 433 ~~~~~~it~~df~~al~~~ 451 (473)
......||.++..+++..+
T Consensus 217 ~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 217 VAGEEVITRERALEALAAL 235 (239)
T ss_dssp TSCCSCBCHHHHHHHHHHH
T ss_pred HhCCCCcCHHHHHHHHhhh
Confidence 1223569999999998754
No 7
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.86 E-value=7.2e-22 Score=187.35 Aligned_cols=182 Identities=18% Similarity=0.212 Sum_probs=124.8
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchhhhhhh---
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEG--- 293 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~~~g~~--- 293 (473)
-|+|..+.++.+.+.+..... .+......|+++||||||||||||++|+++|++++.+|+.+++++....+.+..
T Consensus 10 ~~i~~~~~i~~i~~~~~~~~~--~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~ 87 (246)
T d1d2na_ 10 GIIKWGDPVTRVLDDGELLVQ--QTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQ 87 (246)
T ss_dssp CCCCCSHHHHHHHHHHHHHHH--HHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHHH--HHhccCCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhh
Confidence 355544444444444433222 223334567899999999999999999999999999999999887655544332
Q ss_pred ---------hhhhcceeeeecccccccc--CcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCCCHH-Hhcccc
Q 012000 294 ---------EKLVRTLFMIDSIMSTRMA--NENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQELDDA-VLRRLV 361 (473)
Q Consensus 294 ---------~~~~~~if~IDei~~~~~~--~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~Ld~a-l~rRf~ 361 (473)
.+.-+++++|||++..... .......++.+.++..+++... ...+|+||||||+++.+|++ +++||+
T Consensus 88 ~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~-~~~~v~vi~tTn~~~~ld~~~~~~rF~ 166 (246)
T d1d2na_ 88 AMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPP-QGRKLLIIGTTSRKDVLQEMEMLNAFS 166 (246)
T ss_dssp HHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCS-TTCEEEEEEEESCHHHHHHTTCTTTSS
T ss_pred hhhhhhhhhhhcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCc-cccceeeeeccCChhhccchhhcCccc
Confidence 2222468889999764332 1223346788899999998854 35679999999999999876 567999
Q ss_pred cccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCC
Q 012000 362 KRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYS 405 (473)
Q Consensus 362 ~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s 405 (473)
..|++|.+. +|.++++.+-... .+++.++..+++.+.|.+
T Consensus 167 ~~i~~P~~~--~r~~il~~l~~~~--~~~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 167 TTIHVPNIA--TGEQLLEALELLG--NFKDKERTTIAQQVKGKK 206 (246)
T ss_dssp EEEECCCEE--EHHHHHHHHHHHT--CSCHHHHHHHHHHHTTSE
T ss_pred eEEecCCch--hHHHHHHHHHhcc--CCChHHHHHHHHHcCCCc
Confidence 988885543 3444444332222 246788899999998855
No 8
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.85 E-value=5.6e-21 Score=180.40 Aligned_cols=202 Identities=23% Similarity=0.279 Sum_probs=151.2
Q ss_pred ccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCC-----------
Q 012000 207 VDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQA----------- 275 (473)
Q Consensus 207 v~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~----------- 275 (473)
.++|+|.+|+|++|++++++.|+.++. ....++++|||||||||||++|++++++++.
T Consensus 3 ~~KyrP~~~~dlig~~~~~~~L~~~i~-----------~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~ 71 (239)
T d1njfa_ 3 ARKWRPQTFADVVGQEHVLTALANGLS-----------LGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGV 71 (239)
T ss_dssp HHHTCCSSGGGSCSCHHHHHHHHHHHH-----------TTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSC
T ss_pred hhhhCCCCHHHccChHHHHHHHHHHHH-----------cCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCcccc
Confidence 467899999999999999999999885 2344678999999999999999999998742
Q ss_pred -------------cEEEEecCccch-----hhhhhh----hhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcC
Q 012000 276 -------------TFFNVSASSLTS-----KWVGEG----EKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVT 333 (473)
Q Consensus 276 -------------~~~~v~~~~l~~-----~~~g~~----~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~ 333 (473)
.++.++.++... ...... ...-..++.|||++.. .....+.|+..|+.
T Consensus 72 ~~~~~~i~~~~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l--------~~~~q~~Llk~lE~-- 141 (239)
T d1njfa_ 72 CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHML--------SRHSFNALLKTLEE-- 141 (239)
T ss_dssp SHHHHHHHHTCCTTEEEEETTCSSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGS--------CHHHHHHHHHHHHS--
T ss_pred chHHHHHHcCCCCeEEEecchhcCCHHHHHHHHHHHHhccccCCCEEEEEECcccC--------CHHHHHHHHHHHhc--
Confidence 255666543211 000000 0011247779999543 34456678888873
Q ss_pred CCCCCcEEEEeecCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHH
Q 012000 334 SNPNDLVIVMGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALC 413 (473)
Q Consensus 334 ~~~~~~v~vI~tTn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~ 413 (473)
+..++.+|++||.++.+.+++++||. .+.++.|+.++...++...+...+..+++..++.|+..+.| +.+.+-+++
T Consensus 142 --~~~~~~~il~tn~~~~i~~~i~SRc~-~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~G-d~R~ain~l 217 (239)
T d1njfa_ 142 --PPEHVKFLLATTDPQKLPVTILSRCL-QFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEG-SLRDALSLT 217 (239)
T ss_dssp --CCTTEEEEEEESCGGGSCHHHHTTSE-EEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTT-CHHHHHHHH
T ss_pred --CCCCeEEEEEcCCccccChhHhhhhc-ccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCC-CHHHHHHHH
Confidence 34568899999999999999999995 58999999999999999999888888999999999999998 555555666
Q ss_pred HHHHHHhHHHhcccccccccccCCCCcHHHHHHHH
Q 012000 414 EEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAM 448 (473)
Q Consensus 414 ~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al 448 (473)
+.|.... ...|+.+++.++|
T Consensus 218 ~~~~~~~---------------~~~I~~~~v~~~l 237 (239)
T d1njfa_ 218 DQAIASG---------------DGQVSTQAVSAML 237 (239)
T ss_dssp HHHHHHT---------------TTSBCHHHHHHHH
T ss_pred HHHHHhC---------------CCCcCHHHHHHHh
Confidence 6543221 1348888888776
No 9
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.85 E-value=6.7e-21 Score=178.47 Aligned_cols=189 Identities=19% Similarity=0.176 Sum_probs=144.5
Q ss_pred hhccccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcC-----CcE
Q 012000 203 NTAIVDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQ-----ATF 277 (473)
Q Consensus 203 ~~~iv~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~-----~~~ 277 (473)
....+++|.|.+|+||+|++++++.|+.++.. . ...++|||||||||||++|+++|++++ ..+
T Consensus 11 ~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~----------~--~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~ 78 (231)
T d1iqpa2 11 EKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKT----------G--SMPHLLFAGPPGVGKTTAALALARELFGENWRHNF 78 (231)
T ss_dssp TSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHH----------T--CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHE
T ss_pred hchHHHHhCCCCHHHccCcHHHHHHHHHHHHc----------C--CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCe
Confidence 34457889999999999999999999999852 1 234799999999999999999999864 478
Q ss_pred EEEecCccchhhh-----hh------hhhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeec
Q 012000 278 FNVSASSLTSKWV-----GE------GEKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGAT 346 (473)
Q Consensus 278 ~~v~~~~l~~~~~-----g~------~~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tT 346 (473)
+++++++...... .. .......++.+||++... ......|+..++. ...++.+|++|
T Consensus 79 ~e~n~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~--------~~~~~~ll~~l~~----~~~~~~~i~~~ 146 (231)
T d1iqpa2 79 LELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALT--------QDAQQALRRTMEM----FSSNVRFILSC 146 (231)
T ss_dssp EEEETTCHHHHHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSC--------HHHHHHHHHHHHH----TTTTEEEEEEE
T ss_pred eEEecCcccchhHHHHHHHHHHhhhhccCCCceEEeehhhhhcc--------hhHHHHHhhhccc----CCcceEEEecc
Confidence 8888876533210 00 111224577799994332 2334455555552 23458899999
Q ss_pred CCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHH
Q 012000 347 NKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAA 417 (473)
Q Consensus 347 n~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~ 417 (473)
|.+..+++++++||.. +.++.|+..+...+++..+.+.++.+++..+..+++.+.| +.+++-++++.+.
T Consensus 147 n~~~~i~~~l~sR~~~-i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~~Lq~~~ 215 (231)
T d1iqpa2 147 NYSSKIIEPIQSRCAI-FRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAINILQAAA 215 (231)
T ss_dssp SCGGGSCHHHHHTEEE-EECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred CChhhchHhHhCcccc-ccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 9999999999999965 9999999999999999999999999999999999999988 5666656665543
No 10
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=8.3e-21 Score=177.27 Aligned_cols=206 Identities=14% Similarity=0.138 Sum_probs=149.7
Q ss_pred cccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCC-----cEEEE
Q 012000 206 IVDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQA-----TFFNV 280 (473)
Q Consensus 206 iv~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~-----~~~~v 280 (473)
.+++|+|.+|+|++|++++++.|+.++.. . . ..++|||||||||||++|+++|++++. .++.+
T Consensus 4 w~ekyrP~~~~divg~~~~~~~L~~~i~~----------~-~-~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~ 71 (227)
T d1sxjc2 4 WVEKYRPETLDEVYGQNEVITTVRKFVDE----------G-K-LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 71 (227)
T ss_dssp HHHHTCCSSGGGCCSCHHHHHHHHHHHHT----------T-C-CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEE
T ss_pred hhhhhCCCCHHHccCcHHHHHHHHHHHHc----------C-C-CCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEe
Confidence 35678999999999999999999999842 1 1 236999999999999999999998743 35666
Q ss_pred ecCccchhhhhhhhh-----------hhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCC
Q 012000 281 SASSLTSKWVGEGEK-----------LVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKP 349 (473)
Q Consensus 281 ~~~~l~~~~~g~~~~-----------~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~ 349 (473)
+.++........... .-..++.||+++... ......|+..++.. ..+++++.+||.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~--------~~~~~~Ll~~le~~----~~~~~~~~~~~~~ 139 (227)
T d1sxjc2 72 NASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT--------NAAQNALRRVIERY----TKNTRFCVLANYA 139 (227)
T ss_dssp CTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC--------HHHHHHHHHHHHHT----TTTEEEEEEESCG
T ss_pred cccccCCeeeeecchhhccccccccCCCeEEEEEeccccch--------hhHHHHHHHHhhhc----ccceeeccccCcH
Confidence 666543322111100 012377799995433 33455666666643 3457888899999
Q ss_pred CCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhccccc
Q 012000 350 QELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNIL 429 (473)
Q Consensus 350 ~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~ 429 (473)
..+++++++||.. +.|+.|+.++...++...+..+++.++++.++.|++.+.| ..+.+-++++.+...
T Consensus 140 ~~i~~~i~sr~~~-i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain~Lq~~~~~---------- 207 (227)
T d1sxjc2 140 HKLTPALLSQCTR-FRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLNVLQSCKAT---------- 207 (227)
T ss_dssp GGSCHHHHTTSEE-EECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHHHTTTTTTT----------
T ss_pred HHhHHHHHHHHhh-hccccccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHHHHHHHHHh----------
Confidence 9999999999865 8999999999999999999999999999999999999998 343333333332111
Q ss_pred ccccccCCCCcHHHHHHHH
Q 012000 430 TVKANQLRPLRYEDFQKAM 448 (473)
Q Consensus 430 ~~~~~~~~~it~~df~~al 448 (473)
........||.+++.+++
T Consensus 208 -~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 208 -LDNPDEDEISDDVIYECC 225 (227)
T ss_dssp -TCSSSCCCBCHHHHHHHT
T ss_pred -cCCCCCCeeCHHHHHHHh
Confidence 112234678999988875
No 11
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=1.4e-20 Score=178.41 Aligned_cols=192 Identities=19% Similarity=0.226 Sum_probs=134.3
Q ss_pred ccCCCCCCcccccChHHHHHHHHHHHhchh-cchhhhhc----CCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 207 VDRSPSVKWEDVAGLEKAKQALMEMVILPA-KRRDLFTG----LRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 207 v~~~~~~~~~divGl~~~k~~L~e~v~~p~-~~~~~~~~----~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
+++|+|.+|+|++|++++++.|++++.... ..+..+.. ...+.+++|||||||||||++|+++|++++.+++.++
T Consensus 5 ~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~ 84 (253)
T d1sxja2 5 TVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQN 84 (253)
T ss_dssp HHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred ccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccc
Confidence 467899999999999999999999986422 22222211 1234578999999999999999999999999999999
Q ss_pred cCccchhhhhhhh-----------------------hhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCC
Q 012000 282 ASSLTSKWVGEGE-----------------------KLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPND 338 (473)
Q Consensus 282 ~~~l~~~~~g~~~-----------------------~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~ 338 (473)
+++..+.+..... .....++.+|+++......... ...++..... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~-----~~~~~~~~~~----~~~ 155 (253)
T d1sxja2 85 ASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGG-----VGQLAQFCRK----TST 155 (253)
T ss_dssp TTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTH-----HHHHHHHHHH----CSS
T ss_pred cccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhhh-----hHHHhhhhcc----ccc
Confidence 8876554322110 0112355688876554333221 2223333221 123
Q ss_pred cEEEEeecCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHH
Q 012000 339 LVIVMGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALC 413 (473)
Q Consensus 339 ~v~vI~tTn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~ 413 (473)
+++++++++....++ .+++| ...+.|+.|+.+++..+++.++..+++.+++..++.|+..+.| ||+.++
T Consensus 156 ~ii~i~~~~~~~~~~-~l~~~-~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G----DiR~ai 224 (253)
T d1sxja2 156 PLILICNERNLPKMR-PFDRV-CLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG----DIRQVI 224 (253)
T ss_dssp CEEEEESCTTSSTTG-GGTTT-SEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT----CHHHHH
T ss_pred ccccccccccccccc-cccce-eeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCC----cHHHHH
Confidence 466666666655555 35444 4669999999999999999999988999999999999999887 554443
No 12
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=5.9e-20 Score=171.28 Aligned_cols=185 Identities=14% Similarity=0.090 Sum_probs=139.3
Q ss_pred cccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCC-----cEEEE
Q 012000 206 IVDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQA-----TFFNV 280 (473)
Q Consensus 206 iv~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~-----~~~~v 280 (473)
-+++|+|.+|+|++|++++++.|+.++.. +. ..++|||||||||||++|+++|++++. .++.+
T Consensus 5 w~eKyrP~~~~d~ig~~~~~~~L~~~~~~----------~~--~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~ 72 (224)
T d1sxjb2 5 WVEKYRPQVLSDIVGNKETIDRLQQIAKD----------GN--MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL 72 (224)
T ss_dssp HHHHTCCSSGGGCCSCTHHHHHHHHHHHS----------CC--CCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEE
T ss_pred hHhHhCCCCHHHhcCCHHHHHHHHHHHHc----------CC--CCeEEEECCCCCCchhhHHHHHHHHhccccccccccc
Confidence 45689999999999999999999998841 21 246999999999999999999998763 47788
Q ss_pred ecCccchhhhh-hh-----------hhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCC
Q 012000 281 SASSLTSKWVG-EG-----------EKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNK 348 (473)
Q Consensus 281 ~~~~l~~~~~g-~~-----------~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~ 348 (473)
++++..+...- .. ......++.||+++... ......++..++. ......++.+|+.
T Consensus 73 n~~~~~~~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~--------~~~~~~ll~~~e~----~~~~~~~i~~~~~ 140 (224)
T d1sxjb2 73 NASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT--------AGAQQALRRTMEL----YSNSTRFAFACNQ 140 (224)
T ss_dssp CTTSCCSHHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC--------HHHHHTTHHHHHH----TTTTEEEEEEESC
T ss_pred cccccCCceehhhHHHHHHHhhccCCCcceEEEEEecccccc--------hhHHHHHhhhccc----cccceeeeeccCc
Confidence 87765332110 00 01113477799995443 2334445555552 2445788889999
Q ss_pred CCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHH
Q 012000 349 PQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEA 416 (473)
Q Consensus 349 ~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A 416 (473)
...+.+++++||.. +.|+.|+.++...++...+.++++.+++..++.++..+.| ..+..-++++.+
T Consensus 141 ~~~i~~~l~sr~~~-i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~G-d~R~ai~~Lq~~ 206 (224)
T d1sxjb2 141 SNKIIEPLQSQCAI-LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG-DMRQAINNLQST 206 (224)
T ss_dssp GGGSCHHHHTTSEE-EECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHH-hhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCC-cHHHHHHHHHHH
Confidence 99999999999964 9999999999999999999999999999999999999998 344444444443
No 13
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=2.1e-19 Score=168.21 Aligned_cols=206 Identities=15% Similarity=0.132 Sum_probs=148.1
Q ss_pred ccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc------CCcEEEE
Q 012000 207 VDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES------QATFFNV 280 (473)
Q Consensus 207 v~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~------~~~~~~v 280 (473)
+++++|.+|+|++|++++++.|+.++.. ....++||+||||||||++++++|+++ ....+.+
T Consensus 3 ~~ky~P~~~~diig~~~~~~~l~~~i~~------------~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~ 70 (237)
T d1sxjd2 3 VEKYRPKNLDEVTAQDHAVTVLKKTLKS------------ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 70 (237)
T ss_dssp HHHTCCSSTTTCCSCCTTHHHHHHHTTC------------TTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred chhhCCCCHHHccCcHHHHHHHHHHHHc------------CCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhhe
Confidence 5678999999999999999999988741 112469999999999999999999986 4566767
Q ss_pred ecCccchhh-----hhhh----------------hhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCc
Q 012000 281 SASSLTSKW-----VGEG----------------EKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDL 339 (473)
Q Consensus 281 ~~~~l~~~~-----~g~~----------------~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~ 339 (473)
+++...... +... ...-..++.|||++... ....+.++..++. ....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~--------~~~~~~l~~~~~~----~~~~ 138 (237)
T d1sxjd2 71 NASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT--------ADAQSALRRTMET----YSGV 138 (237)
T ss_dssp CSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSC--------HHHHHHHHHHHHH----TTTT
T ss_pred eccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccC--------HHHHHHHhhcccc----cccc
Confidence 665442211 0000 00112367799985443 2233344444432 2344
Q ss_pred EEEEeecCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 012000 340 VIVMGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAAMM 419 (473)
Q Consensus 340 v~vI~tTn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~ 419 (473)
.++|.+++....+.+++++||. .+.|+.|+.++...+++..+.++++.++++.++.||+.+.| ..+..-++++.++..
T Consensus 139 ~~~i~~~~~~~~~~~~l~sr~~-~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~g-d~R~ai~~L~~~~~~ 216 (237)
T d1sxjd2 139 TRFCLICNYVTRIIDPLASQCS-KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGITLLQSASKG 216 (237)
T ss_dssp EEEEEEESCGGGSCHHHHHHSE-EEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSS-CHHHHHHHHHHTHHH
T ss_pred ccccccccccccccccccchhh-hhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHHHh
Confidence 6778888999999999999994 58999999999999999999999999999999999999988 455544566655544
Q ss_pred hHHHhcccccccccccCCCCcHHHHHHHH
Q 012000 420 PIRELGTNILTVKANQLRPLRYEDFQKAM 448 (473)
Q Consensus 420 a~~~~~~~~~~~~~~~~~~it~~df~~al 448 (473)
+... .....||.+++++++
T Consensus 217 ~~~~----------~~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 217 AQYL----------GDGKNITSTQVEELA 235 (237)
T ss_dssp HHHH----------CSCCCCCHHHHHHHH
T ss_pred chhc----------CCCCccCHHHHHHhh
Confidence 3222 122468888888765
No 14
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.81 E-value=4.1e-20 Score=181.01 Aligned_cols=165 Identities=22% Similarity=0.319 Sum_probs=126.4
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcC--CCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch--hhhhh
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGL--RRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS--KWVGE 292 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~--~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~--~~~g~ 292 (473)
.|+|++++++.|.+++..+..+..+.... ..|++++||+||||||||+||+++|++++.+|+.++++++.. .|.++
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeee
Confidence 37999999999999986665554443322 246799999999999999999999999999999999998863 35555
Q ss_pred hhhh----------------hcceeeeeccccccccCc---ch-HHHHHHHHHHHHhcCcCCCC------CCcEEEEee-
Q 012000 293 GEKL----------------VRTLFMIDSIMSTRMANE---ND-ASRRLKSEFLIQFDGVTSNP------NDLVIVMGA- 345 (473)
Q Consensus 293 ~~~~----------------~~~if~IDei~~~~~~~~---~~-~~~~~~~~ll~~ldg~~~~~------~~~v~vI~t- 345 (473)
.+.. .+++++||||+....... .+ ....++++||..++|..... ..++++|++
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~g 174 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASG 174 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEE
T ss_pred ccccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEecc
Confidence 4332 257888999988654332 22 23457788999999853221 124667766
Q ss_pred ---cCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHH
Q 012000 346 ---TNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHK 381 (473)
Q Consensus 346 ---Tn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~ 381 (473)
++.++.++|++++||+.++.++.|+...+.+|+..+
T Consensus 175 a~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~~ 213 (309)
T d1ofha_ 175 AFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEP 213 (309)
T ss_dssp CCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHSS
T ss_pred chhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHHHH
Confidence 688999999999999999999999999999997643
No 15
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.77 E-value=7.5e-22 Score=192.42 Aligned_cols=147 Identities=19% Similarity=0.179 Sum_probs=112.1
Q ss_pred hhcchhhhhcC-CCCCceEE-EEcCCCCcHHHHHHHHHHHcC--CcEEEEecCccchhhhhhhhhhhcc---------ee
Q 012000 235 PAKRRDLFTGL-RRPARGLL-LFGPPGNGKTMLAKAVASESQ--ATFFNVSASSLTSKWVGEGEKLVRT---------LF 301 (473)
Q Consensus 235 p~~~~~~~~~~-~~~~~~iL-L~GPpGtGKT~La~aiA~e~~--~~~~~v~~~~l~~~~~g~~~~~~~~---------if 301 (473)
+...|..+..+ ..+++|+| ||||||||||.||+++|.+++ .+|+.+++++++++|+|+.+..++. |+
T Consensus 107 ~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~~~il 186 (321)
T d1w44a_ 107 VGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQHRVI 186 (321)
T ss_dssp CSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHHCSEE
T ss_pred cccchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhhccEE
Confidence 33445555544 34566655 589999999999999999986 7899999999999999999887764 55
Q ss_pred eeecccccccc----CcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCCCHHH----hc--ccccccccCCCcH
Q 012000 302 MIDSIMSTRMA----NENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQELDDAV----LR--RLVKRIYVPLPDE 371 (473)
Q Consensus 302 ~IDei~~~~~~----~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~Ld~al----~r--Rf~~~i~~~~P~~ 371 (473)
+||||+..... .......+.++++|.+|||+... .+|+||+||| |+.+|+++ +| ||++.++++.|+.
T Consensus 187 f~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~--~~v~viaatN-~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~ 263 (321)
T d1w44a_ 187 VIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAAS--RGCVVIASLN-PTSNDDKIVELVKEASRSNSTSLVISTDV 263 (321)
T ss_dssp EEECCTTTC-----------CCHHHHHHHHHHHHHHHH--HTCEEEEECC-CCCCCHHHHHHHHHHHHHSCSEEEEECSS
T ss_pred EeehhhhhccccccCCCCCcchhhhhhhhhhccccccC--CCeEEEEeCC-CcccccchhhhhhccCcccceeecCCCCh
Confidence 68988775332 23334458999999999999654 4599999999 56666555 45 9999999999999
Q ss_pred HHHHHHHHHHhcc
Q 012000 372 NVRRLLLKHKLKG 384 (473)
Q Consensus 372 ~~r~~il~~~l~~ 384 (473)
+.|.+|+..+...
T Consensus 264 ~~r~~il~~~~~~ 276 (321)
T d1w44a_ 264 DGEWQVLTRTGEG 276 (321)
T ss_dssp TTEEEEEEECBTT
T ss_pred HHHHHHHHHhccC
Confidence 9999998766544
No 16
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=1e-18 Score=165.01 Aligned_cols=173 Identities=15% Similarity=0.192 Sum_probs=120.2
Q ss_pred ccCCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCC---cEE-----
Q 012000 207 VDRSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQA---TFF----- 278 (473)
Q Consensus 207 v~~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~---~~~----- 278 (473)
+++|+|.+|+|++|++++++.|+.++.. ...+.++|||||||||||++|+++|+++.. ...
T Consensus 2 ~eky~P~~~~diig~~~~~~~L~~~~~~-----------~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~ 70 (252)
T d1sxje2 2 VDKYRPKSLNALSHNEELTNFLKSLSDQ-----------PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVR 70 (252)
T ss_dssp TTTTCCCSGGGCCSCHHHHHHHHTTTTC-----------TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------
T ss_pred CcccCCCCHHHccCcHHHHHHHHHHHHc-----------CCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccc
Confidence 4789999999999999999999877642 122347999999999999999999998621 111
Q ss_pred ---------------------EEecCccchhh---hhhh------------------hhhhcceeeeeccccccccCcch
Q 012000 279 ---------------------NVSASSLTSKW---VGEG------------------EKLVRTLFMIDSIMSTRMANEND 316 (473)
Q Consensus 279 ---------------------~v~~~~l~~~~---~g~~------------------~~~~~~if~IDei~~~~~~~~~~ 316 (473)
.+...+..... .... ......++.||+++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l------- 143 (252)
T d1sxje2 71 QFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSL------- 143 (252)
T ss_dssp ------------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSS-------
T ss_pred cccccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEecccccc-------
Confidence 11111110000 0000 0001135667888443
Q ss_pred HHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCC-hhhHH
Q 012000 317 ASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLP-GGDLE 395 (473)
Q Consensus 317 ~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~-~~~l~ 395 (473)
.....+.++..++. ...++.+|++||.++.+++++++||. .|+|+.|+.++...++...+...++.+. ++.++
T Consensus 144 -~~~~~~~l~~~~e~----~~~~~~~Il~tn~~~~i~~~l~sR~~-~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~ 217 (252)
T d1sxje2 144 -TKDAQAALRRTMEK----YSKNIRLIMVCDSMSPIIAPIKSQCL-LIRCPAPSDSEISTILSDVVTNERIQLETKDILK 217 (252)
T ss_dssp -CHHHHHHHHHHHHH----STTTEEEEEEESCSCSSCHHHHTTSE-EEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHH
T ss_pred -ccccchhhhccccc----ccccccceeeeccccchhhhhhcchh-eeeecccchhhHHHHHHHHHHHcCCCCCcHHHHH
Confidence 22334455555553 24457889999999999999999995 6899999999999999999888777664 56788
Q ss_pred HHHHHcCC
Q 012000 396 RLVRETEG 403 (473)
Q Consensus 396 ~La~~t~g 403 (473)
.|+..+.|
T Consensus 218 ~i~~~s~G 225 (252)
T d1sxje2 218 RIAQASNG 225 (252)
T ss_dssp HHHHHHTT
T ss_pred HHHHHcCC
Confidence 99999988
No 17
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.72 E-value=1.6e-16 Score=150.58 Aligned_cols=215 Identities=13% Similarity=0.038 Sum_probs=139.7
Q ss_pred CCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc----CCcEEEEecCccch
Q 012000 212 SVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES----QATFFNVSASSLTS 287 (473)
Q Consensus 212 ~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~----~~~~~~v~~~~l~~ 287 (473)
....+.++|.+..++.|.+++...+. ....++.++||+||||||||++|+++++.+ +..++.+++.....
T Consensus 12 ~y~p~~l~~Re~ei~~l~~~l~~~l~------~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 85 (276)
T d1fnna2 12 SYVPKRLPHREQQLQQLDILLGNWLR------NPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN 85 (276)
T ss_dssp TCCCSCCTTCHHHHHHHHHHHHHHHH------STTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHh------CCCCCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhh
Confidence 34456789999999999988853322 223456799999999999999999999987 45677776554322
Q ss_pred hhhhhh----------------------------hhh-hcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCC
Q 012000 288 KWVGEG----------------------------EKL-VRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPND 338 (473)
Q Consensus 288 ~~~g~~----------------------------~~~-~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~ 338 (473)
...... ... ...+..+|+++... ......+...+.........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--------~~~~~~~~~~~~~~~~~~~~ 157 (276)
T d1fnna2 86 FTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA--------PDILSTFIRLGQEADKLGAF 157 (276)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC--------HHHHHHHHHHTTCHHHHSSC
T ss_pred hhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhh--------hhhhhhHHHHHhcccccccc
Confidence 110000 000 01122244442211 11122222222221112234
Q ss_pred cEEEEeecCCC---CCCCHHHhcccc-cccccCCCcHHHHHHHHHHHhcc--CCCCCChhhHHHHHHHcCC--------C
Q 012000 339 LVIVMGATNKP---QELDDAVLRRLV-KRIYVPLPDENVRRLLLKHKLKG--QAFSLPGGDLERLVRETEG--------Y 404 (473)
Q Consensus 339 ~v~vI~tTn~~---~~Ld~al~rRf~-~~i~~~~P~~~~r~~il~~~l~~--~~~~l~~~~l~~La~~t~g--------~ 404 (473)
.+.+|++++.. +.+++.+.+||. ..|.|+.|+.+++..|++..+.. ....+++..++.++..+.. -
T Consensus 158 ~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G 237 (276)
T d1fnna2 158 RIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRG 237 (276)
T ss_dssp CEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSC
T ss_pred ceEEeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCC
Confidence 47788888764 467899988775 45899999999999999887764 3444678889999887531 1
Q ss_pred CHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHHhh
Q 012000 405 SGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 405 s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 451 (473)
+++.+.++|+.|+..|..+ ..+.|+.+|+++|++++
T Consensus 238 ~~R~a~~ll~~a~~~A~~~-----------~~~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 238 DARLAIDILYRSAYAAQQN-----------GRKHIAPEDVRKSSKEV 273 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHT-----------TCSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHc-----------CCCCcCHHHHHHHHHHH
Confidence 5678888999998877554 23569999999999875
No 18
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.63 E-value=5.3e-15 Score=136.39 Aligned_cols=186 Identities=20% Similarity=0.277 Sum_probs=128.6
Q ss_pred CCCCccccc-C--hHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCc
Q 012000 211 PSVKWEDVA-G--LEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASS 284 (473)
Q Consensus 211 ~~~~~~div-G--l~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~ 284 (473)
|..+|++++ | .+.+.+.+++++..| ......++||||||||||+|++|+|+++ +..++.++..+
T Consensus 5 ~~~tFdnF~vg~~N~~a~~~~~~~~~~~----------~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~ 74 (213)
T d1l8qa2 5 PKYTLENFIVGEGNRLAYEVVKEALENL----------GSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADD 74 (213)
T ss_dssp TTCCSSSCCCCTTTHHHHHHHHHHHHTT----------TTSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CCCChhhccCCCcHHHHHHHHHHHHhCc----------CCCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHH
Confidence 667999964 5 666777777776533 1223459999999999999999999987 56777777776
Q ss_pred cchhhhhhh--------hhh--hcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCC--
Q 012000 285 LTSKWVGEG--------EKL--VRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQEL-- 352 (473)
Q Consensus 285 l~~~~~g~~--------~~~--~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~L-- 352 (473)
+........ ... -..++.||+++..... ......|...++.... .+..+||++...|..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~dll~iDDi~~i~~~------~~~~~~lf~lin~~~~--~~~~iiits~~~p~~l~~ 146 (213)
T d1l8qa2 75 FAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGK------ERTQIEFFHIFNTLYL--LEKQIILASDRHPQKLDG 146 (213)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTCSEEEEECGGGGTTC------HHHHHHHHHHHHHHHH--TTCEEEEEESSCGGGCTT
T ss_pred HHHHHHHHHHccchhhHHHHHhhccchhhhhhhhhcCc------hHHHHHHHHHHHHHhh--ccceEEEecCCcchhccc
Confidence 654332211 111 1367889999654322 1222333333333322 2335667777777655
Q ss_pred -CHHHhcccc--cccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHH
Q 012000 353 -DDAVLRRLV--KRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAA 417 (473)
Q Consensus 353 -d~al~rRf~--~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~ 417 (473)
.+.+++||. .++.++ |+.++|..+++.++...++.++++.++.|++++. +.++|..+++...
T Consensus 147 ~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~l~ 211 (213)
T d1l8qa2 147 VSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKLIK 211 (213)
T ss_dssp SCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHHHH
T ss_pred cchHHHHHhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHHHHHhh
Confidence 588999987 345676 6678999999999999999999999999999874 5899988877653
No 19
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.61 E-value=3e-16 Score=155.89 Aligned_cols=187 Identities=15% Similarity=0.064 Sum_probs=119.1
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchhh-hhhhhhhhcceeeeeccccccccC---cchHHHHHH
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKW-VGEGEKLVRTLFMIDSIMSTRMAN---ENDASRRLK 322 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~~-~g~~~~~~~~if~IDei~~~~~~~---~~~~~~~~~ 322 (473)
...+++|||||||||||++|+++|+.++.+|+.+++++..+.+ ++........+ +|++....... .....-.-.
T Consensus 152 ~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l--~d~~~~~~~~~~~~~~~~~~Dei 229 (362)
T d1svma_ 152 PKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVV--FEDVKGTGGESRDLPSGQGINNL 229 (362)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEE--ETTCCCSTTTTTTCCCCSHHHHH
T ss_pred CCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHH--HHHHHHhhhhccCCCCeEEEehH
Confidence 3457999999999999999999999999999999999887764 55554444333 45553322111 011111112
Q ss_pred HHHHHHhcCcCC-----CCCCc-----EEEEeecCCCCCCCHHHh-cccccccccCCCcHHHHH-HHHHHHhccCCCCCC
Q 012000 323 SEFLIQFDGVTS-----NPNDL-----VIVMGATNKPQELDDAVL-RRLVKRIYVPLPDENVRR-LLLKHKLKGQAFSLP 390 (473)
Q Consensus 323 ~~ll~~ldg~~~-----~~~~~-----v~vI~tTn~~~~Ld~al~-rRf~~~i~~~~P~~~~r~-~il~~~l~~~~~~l~ 390 (473)
..+...++|... ..... ..+|+|||... .+.++ .||+..+++..|+...+. .++..++.+..+.
T Consensus 230 D~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~--~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~-- 305 (362)
T d1svma_ 230 DNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYS--VPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQ-- 305 (362)
T ss_dssp HTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCC--CCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTT--
T ss_pred hhcccccCCcchhhhhhhhhchhhhccCCceeeccccc--ccccccccCceEEeecCCCcHHHHHHHHHHHhcccCCC--
Confidence 234445555321 00001 13788999532 22233 399999999999877764 4555666666554
Q ss_pred hhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHHhh
Q 012000 391 GGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 391 ~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 451 (473)
.+.+.|+..+.+++++|+..+++.++..+.+++.. .+++..|......+
T Consensus 306 -~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~-----------ei~~~~~~~~k~~I 354 (362)
T d1svma_ 306 -SGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDK-----------EFSLSVYQKMKFNV 354 (362)
T ss_dssp -CHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHH-----------HCCHHHHHHHHHHH
T ss_pred -CCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhh-----------hccHHHHHHHHHHH
Confidence 34566788888999999999999998877666533 24555565554443
No 20
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.61 E-value=5.3e-15 Score=140.63 Aligned_cols=221 Identities=13% Similarity=0.007 Sum_probs=138.5
Q ss_pred CcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcC---------CcEEEEecCc
Q 012000 214 KWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQ---------ATFFNVSASS 284 (473)
Q Consensus 214 ~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~---------~~~~~v~~~~ 284 (473)
..+.+.|.+...+.|.+++..++.... ....+...++||||||||||++++++++++. ..+..+++..
T Consensus 14 ~P~~~~~Re~e~~~l~~~l~~~~~~~~---~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (287)
T d1w5sa2 14 IPPELRVRRGEAEALARIYLNRLLSGA---GLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFN 90 (287)
T ss_dssp CCSSCSSSCHHHHHHHHHHHHHHHTSS---CBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCC---CCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeecccc
Confidence 346778988888888887764443221 0111223567899999999999999999862 3444455443
Q ss_pred cchhhh----------------hhh-------------hhhhcceeeeeccccccccCc-chHHHHHHHHHHHHhcCcCC
Q 012000 285 LTSKWV----------------GEG-------------EKLVRTLFMIDSIMSTRMANE-NDASRRLKSEFLIQFDGVTS 334 (473)
Q Consensus 285 l~~~~~----------------g~~-------------~~~~~~if~IDei~~~~~~~~-~~~~~~~~~~ll~~ldg~~~ 334 (473)
...... +.. ......++.+|+++....... ..........+...+.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~ 170 (287)
T d1w5sa2 91 APNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDG 170 (287)
T ss_dssp CCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTS
T ss_pred ccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhc
Confidence 322100 000 011123444677755443222 11122223333444433322
Q ss_pred CCCCcEEEEeecCCCCC------CCHHHhcccccccccCCCcHHHHHHHHHHHhcc--CCCCCChhhHHHHHHHcCC---
Q 012000 335 NPNDLVIVMGATNKPQE------LDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKG--QAFSLPGGDLERLVRETEG--- 403 (473)
Q Consensus 335 ~~~~~v~vI~tTn~~~~------Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~--~~~~l~~~~l~~La~~t~g--- 403 (473)
...+.+|+.+|.++. .++.+.+||...++|+.|+.++...|++..+.. ....++++.++.+|+.+.+
T Consensus 171 --~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~ 248 (287)
T d1w5sa2 171 --VNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKG 248 (287)
T ss_dssp --CCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGT
T ss_pred --ccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHHhcccc
Confidence 334566666665543 357888899999999999999999999987753 3445688899999988742
Q ss_pred --CCHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHHh
Q 012000 404 --YSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAV 450 (473)
Q Consensus 404 --~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~ 450 (473)
-..+...++|+.|+..|..+ ..+.||.+|+.+|+..
T Consensus 249 ~~gd~R~ai~~l~~a~~~A~~~-----------~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 249 GDGSARRAIVALKMACEMAEAM-----------GRDSLSEDLVRKAVSE 286 (287)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHT-----------TCSSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHc-----------CCCCCCHHHHHHHHhc
Confidence 25677778899988777554 2356999999999864
No 21
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.57 E-value=3.1e-14 Score=139.99 Aligned_cols=208 Identities=18% Similarity=0.235 Sum_probs=131.3
Q ss_pred CCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcC----------------
Q 012000 211 PSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQ---------------- 274 (473)
Q Consensus 211 ~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~---------------- 274 (473)
|...|.||+|++.+|+.|.-.+..+- ..|+||+||||||||+||++++.-+.
T Consensus 2 ~~~~f~~I~Gq~~~kral~laa~~~~------------~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 2 PVFPFSAIVGQEDMKLALLLTAVDPG------------IGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHHHCGG------------GCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CCCChhhccCcHHHHHHHHHHHhccC------------CCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccc
Confidence 44579999999999998876664320 24799999999999999999998651
Q ss_pred -----------------CcEEEEecCccchhhh------------------hhhhhhhcceeeeeccccccccCcchHHH
Q 012000 275 -----------------ATFFNVSASSLTSKWV------------------GEGEKLVRTLFMIDSIMSTRMANENDASR 319 (473)
Q Consensus 275 -----------------~~~~~v~~~~l~~~~~------------------g~~~~~~~~if~IDei~~~~~~~~~~~~~ 319 (473)
.+++...........+ |.....-+.+++|||+ +....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi--------~~~~~ 141 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDEC--------NLLED 141 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTG--------GGSCH
T ss_pred cccchhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccccccEeecccH--------HHHHH
Confidence 1222222111111111 1112222468899999 55556
Q ss_pred HHHHHHHHHhcC---------cCCCCCCcEEEEeecCCCC-CCCHHHhcccccccccCCC-cHHHHHHHHHHHh------
Q 012000 320 RLKSEFLIQFDG---------VTSNPNDLVIVMGATNKPQ-ELDDAVLRRLVKRIYVPLP-DENVRRLLLKHKL------ 382 (473)
Q Consensus 320 ~~~~~ll~~ldg---------~~~~~~~~v~vI~tTn~~~-~Ld~al~rRf~~~i~~~~P-~~~~r~~il~~~l------ 382 (473)
...+.|+..|+. ....-+.++++|+|+|..+ .+++++++||+..+.++.| +...+..+.....
T Consensus 142 ~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (333)
T d1g8pa_ 142 HIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADP 221 (333)
T ss_dssp HHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccCh
Confidence 788888888862 2212234588999998755 5899999999988888876 4445444432211
Q ss_pred -----------------------ccCCCCCChhhHHHHHH---HcCCCCHHHHHHHHHHHHHHhHHHhcccccccccccC
Q 012000 383 -----------------------KGQAFSLPGGDLERLVR---ETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQL 436 (473)
Q Consensus 383 -----------------------~~~~~~l~~~~l~~La~---~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~ 436 (473)
.-..+..++.....++. .....|.+-...+++-|...|.-+ ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~-----------gr 290 (333)
T d1g8pa_ 222 KAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALE-----------GA 290 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHT-----------TC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHc-----------CC
Confidence 00112334444444333 344457787778887776665433 23
Q ss_pred CCCcHHHHHHHHH
Q 012000 437 RPLRYEDFQKAMA 449 (473)
Q Consensus 437 ~~it~~df~~al~ 449 (473)
..|+.+|+.+|+.
T Consensus 291 ~~V~~~di~~a~~ 303 (333)
T d1g8pa_ 291 TAVGRDHLKRVAT 303 (333)
T ss_dssp SBCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5589999998655
No 22
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.53 E-value=1.1e-13 Score=126.81 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=111.5
Q ss_pred ChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcC------------------------C
Q 012000 220 GLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQ------------------------A 275 (473)
Q Consensus 220 Gl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~------------------------~ 275 (473)
+++.+.+.|...+. ..+.++++||+||||+|||++|+++|+.+. .
T Consensus 6 w~~~~~~~l~~~~~-----------~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 74 (207)
T d1a5ta2 6 WLRPDFEKLVASYQ-----------AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHP 74 (207)
T ss_dssp GGHHHHHHHHHHHH-----------TTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCT
T ss_pred ccHHHHHHHHHHHH-----------cCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhcccc
Confidence 45667777776664 334567899999999999999999999762 1
Q ss_pred cEEEEecCc----cchhhh----h----hhhhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEE
Q 012000 276 TFFNVSASS----LTSKWV----G----EGEKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVM 343 (473)
Q Consensus 276 ~~~~v~~~~----l~~~~~----g----~~~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI 343 (473)
.++.+.... +....+ . .....-..++.||+++. ......+.|+..|+ .++.++++|
T Consensus 75 ~~~~~~~~~~~~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~--------l~~~a~n~Llk~lE----ep~~~~~fI 142 (207)
T d1a5ta2 75 DYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAAL--------LTDAAANALLKTLE----EPPAETWFF 142 (207)
T ss_dssp TEEEECCCTTCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGG--------BCHHHHHHHHHHHT----SCCTTEEEE
T ss_pred ccchhhhhhcccccccchhhHHhhhhhhccccCccceEEechhhh--------hhhhhhHHHHHHHH----hhcccceee
Confidence 233332211 000000 0 01111234777899843 33456778888888 456679999
Q ss_pred eecCCCCCCCHHHhcccccccccCCCcHHHHHHHHHHHhccCCCCCChhhHHHHHHHcCCCCHHHH
Q 012000 344 GATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETEGYSGSDL 409 (473)
Q Consensus 344 ~tTn~~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~~~~~l~~~~l~~La~~t~g~s~~dL 409 (473)
++|+.+..|.+++++|| ..+.|+.|+.++...+++.. ..+++..+..++..++| +.++.
T Consensus 143 l~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~-----~~~~~~~~~~i~~~s~G-s~r~a 201 (207)
T d1a5ta2 143 LATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSRE-----VTMSQDALLAALRLSAG-SPGAA 201 (207)
T ss_dssp EEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHH-----CCCCHHHHHHHHHHTTT-CHHHH
T ss_pred eeecChhhhhhhhccee-EEEecCCCCHHHHHHHHHHc-----CCCCHHHHHHHHHHcCC-CHHHH
Confidence 99999999999999999 55999999999888877643 34578899999999988 44443
No 23
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=9.4e-14 Score=131.60 Aligned_cols=213 Identities=20% Similarity=0.257 Sum_probs=145.2
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc----------CCcEEEEec
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES----------QATFFNVSA 282 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~----------~~~~~~v~~ 282 (473)
-.++.++|.++..++|.+.+. +....++||.||||+|||.+++.+|... +..++.++.
T Consensus 15 ~~ld~~igRd~Ei~~l~~iL~------------r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~ 82 (268)
T d1r6bx2 15 GGIDPLIGREKELERAIQVLC------------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 82 (268)
T ss_dssp TCSCCCCSCHHHHHHHHHHHT------------SSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCC
T ss_pred CCCCcccChHHHHHHHHHHHh------------cCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeee
Confidence 367789999999999888773 2334689999999999999999999864 578999999
Q ss_pred Cccch--hhhhhhhhhhc-----------ceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCC-
Q 012000 283 SSLTS--KWVGEGEKLVR-----------TLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNK- 348 (473)
Q Consensus 283 ~~l~~--~~~g~~~~~~~-----------~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~- 348 (473)
..++. +|.|+.+..+. .+++||+++.....+.......-...+|.. .- ..+.+.|||+|..
T Consensus 83 ~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp---~L--~rg~i~vIgatT~e 157 (268)
T d1r6bx2 83 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP---LL--SSGKIRVIGSTTYQ 157 (268)
T ss_dssp C---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSS---CS--SSCCCEEEEEECHH
T ss_pred chHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhH---HH--hCCCCeEEEeCCHH
Confidence 88876 56666665442 577799998876554333222223333321 11 1344888888854
Q ss_pred ----CCCCCHHHhcccccccccCCCcHHHHHHHHHHHh----ccCCCCCChhhHHHHHHHcC------CCCHHHHHHHHH
Q 012000 349 ----PQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKL----KGQAFSLPGGDLERLVRETE------GYSGSDLQALCE 414 (473)
Q Consensus 349 ----~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l----~~~~~~l~~~~l~~La~~t~------g~s~~dL~~l~~ 414 (473)
...-|++|.|||.. |.++.|+.++-..|+.... ..+++.++++.+..+...++ .|.+..|. +++
T Consensus 158 ey~~~~e~d~al~rrF~~-I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAId-llD 235 (268)
T d1r6bx2 158 EFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID-VID 235 (268)
T ss_dssp HHHCCCCCTTSSGGGEEE-EECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHH-HHH
T ss_pred HHHHHHhhcHHHHhhhcc-cccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHHH-HHH
Confidence 23558999999976 9999999999999887643 34678889988887776544 34445554 777
Q ss_pred HHHHHhHHHhcccccccccccCCCCcHHHHHHHHHhh
Q 012000 415 EAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 415 ~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 451 (473)
+|+..+-.. . .......|+.+|++..+.++
T Consensus 236 ea~a~~~~~--~-----~~~~~~~i~~~di~~~i~~~ 265 (268)
T d1r6bx2 236 EAGARARLM--P-----VSKRKKTVNVADIESVVARI 265 (268)
T ss_dssp HHHHHHHHS--S-----SCCCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhh--c-----cccCcccCCHHHHHHHHHHH
Confidence 776543211 1 11223568889998887765
No 24
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.50 E-value=1.2e-13 Score=134.68 Aligned_cols=197 Identities=17% Similarity=0.217 Sum_probs=137.9
Q ss_pred ccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchh-------
Q 012000 216 EDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK------- 288 (473)
Q Consensus 216 ~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~------- 288 (473)
..|+|++++++.|.+.+..... .......|...+||+||||||||.||++||..++.+|+.++++++...
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~---~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l~ 98 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARA---GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 98 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHT---TCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSC
T ss_pred CeecChHHHHHHHHHHHHHHHc---cCCCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhhc
Confidence 3689999999999998853211 011123444568999999999999999999999999999998876432
Q ss_pred -----hhhhh---------hhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcC--C-----CCCCcEEEEeecC
Q 012000 289 -----WVGEG---------EKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVT--S-----NPNDLVIVMGATN 347 (473)
Q Consensus 289 -----~~g~~---------~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~--~-----~~~~~v~vI~tTn 347 (473)
|+|.. ...-..++.+|+++. .+..+.+.||+.++.-. . -.-.+.++|+|+|
T Consensus 99 g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieK--------a~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsn 170 (315)
T d1r6bx3 99 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK--------AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 170 (315)
T ss_dssp CCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGG--------SCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEEC
T ss_pred ccCCCccccccCChhhHHHHhCccchhhhccccc--------ccchHhhhhHHhhccceecCCCCCccCccceEEEeccc
Confidence 22221 122246888999954 34456777777775211 0 0124578888998
Q ss_pred CCC-------------------------CCCHHHhcccccccccCCCcHHHHHHHHHHHhcc---------CCCCCChhh
Q 012000 348 KPQ-------------------------ELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKG---------QAFSLPGGD 393 (473)
Q Consensus 348 ~~~-------------------------~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~~---------~~~~l~~~~ 393 (473)
--. .+.|.++.||+.++.|.+.+.++...|+...+.. ..+.+++..
T Consensus 171 ig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~~~~~a 250 (315)
T d1r6bx3 171 AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 250 (315)
T ss_dssp SSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEEECHHH
T ss_pred hhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCcchhhHHHH
Confidence 422 2678899999999999999998888887665532 233457888
Q ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHhHHH
Q 012000 394 LERLVRE--TEGYSGSDLQALCEEAAMMPIRE 423 (473)
Q Consensus 394 l~~La~~--t~g~s~~dL~~l~~~A~~~a~~~ 423 (473)
++.|+.. ...+.++.|..+++.-...++.+
T Consensus 251 ~~~l~~~~yd~~~GaR~L~r~Ie~~i~~~la~ 282 (315)
T d1r6bx3 251 RNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 282 (315)
T ss_dssp HHHHHHHHCBTTTBTTTHHHHHHHHHTHHHHH
T ss_pred HHHHHHhCCCCCCChhhHHHHHHHHHHHHHHH
Confidence 9999875 44566789999888776666553
No 25
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.49 E-value=1.7e-13 Score=133.46 Aligned_cols=196 Identities=18% Similarity=0.268 Sum_probs=137.6
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCccch------
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASSLTS------ 287 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~l~~------ 287 (473)
.|+|++++++.|.+.+...... ......|...+||+||+|+|||.+|+++|..+ +.+++.++++++..
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~---l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 100 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAG---LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSR 100 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGG---CSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGGG
T ss_pred eEeCHHHHHHHHHHHHHHHhcC---CCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhhh
Confidence 5789999999999887532110 11123343467899999999999999999987 67899999876643
Q ss_pred ------hhhhhh---------hhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCC-------CCCcEEEEee
Q 012000 288 ------KWVGEG---------EKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSN-------PNDLVIVMGA 345 (473)
Q Consensus 288 ------~~~g~~---------~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~-------~~~~v~vI~t 345 (473)
.|+|.. .+.-..|+.+||++. .+..+.+.|+..++.-... .-.+.++|+|
T Consensus 101 L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK--------~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~t 172 (315)
T d1qvra3 101 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEK--------AHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILT 172 (315)
T ss_dssp C--------------CHHHHHHHCSSEEEEESSGGG--------SCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEE
T ss_pred hcCCCCCCcCcccCChHHHHHHhCCCcEEEEehHhh--------cCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEe
Confidence 123221 112247888999944 3455677777777542111 1246899999
Q ss_pred cCC--------------------------CCCCCHHHhcccccccccCCCcHHHHHHHHHHHhc-------c--CCCCCC
Q 012000 346 TNK--------------------------PQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLK-------G--QAFSLP 390 (473)
Q Consensus 346 Tn~--------------------------~~~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~-------~--~~~~l~ 390 (473)
||- ...+.|.++.||+.++.|.+.+.++...|+...+. . ..+.++
T Consensus 173 snlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~ 252 (315)
T d1qvra3 173 SNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELT 252 (315)
T ss_dssp CCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred cccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhcccccccc
Confidence 995 24588999999999999999999888888765443 2 234458
Q ss_pred hhhHHHHHHH--cCCCCHHHHHHHHHHHHHHhHHH
Q 012000 391 GGDLERLVRE--TEGYSGSDLQALCEEAAMMPIRE 423 (473)
Q Consensus 391 ~~~l~~La~~--t~g~s~~dL~~l~~~A~~~a~~~ 423 (473)
+..++.|++. ...|-++.|..++++....++.+
T Consensus 253 ~~~~~~L~~~~y~~~~GAR~L~r~Ie~~i~~~La~ 287 (315)
T d1qvra3 253 EAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQ 287 (315)
T ss_dssp HHHHHHHHHHHCBTTTBTSTHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHHH
Confidence 8899999986 44566789999999877777654
No 26
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=1.4e-13 Score=109.14 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHcCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 012000 53 YFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKWQSQVSD 123 (473)
Q Consensus 53 ~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~~~~~~~~~~~~~~~k~~~y~~raek~k~~i~~ 123 (473)
.+.+|++++++||++|+.|+|++|+.+|++|+++|+.+++.++++..++.++.++.+|++|||+++.++..
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~l~~~~~~e~~~~~k~~l~~k~~eYl~RAE~LK~~l~~ 81 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQ 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999998643
No 27
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.43 E-value=5.3e-13 Score=132.37 Aligned_cols=204 Identities=21% Similarity=0.254 Sum_probs=134.1
Q ss_pred cccChHHHHHHHHHHHhchhcch------------------hhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 217 DVAGLEKAKQALMEMVILPAKRR------------------DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~------------------~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
.|+|++++|+.+..++....++- ........|+.++||.||+|||||.||+++|..++.+|+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~i 97 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA 97 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhccccee
Confidence 48999999999987774221111 111123557889999999999999999999999999999
Q ss_pred EEecCccch-hhhhh----------------hhhhhcceeeeeccccccccC------cchHHHHHHHHHHHHhcCcCCC
Q 012000 279 NVSASSLTS-KWVGE----------------GEKLVRTLFMIDSIMSTRMAN------ENDASRRLKSEFLIQFDGVTSN 335 (473)
Q Consensus 279 ~v~~~~l~~-~~~g~----------------~~~~~~~if~IDei~~~~~~~------~~~~~~~~~~~ll~~ldg~~~~ 335 (473)
.++++.+.. .|+|. ....-..++.+|+++...... .+..+..+.+.||+.+++-...
T Consensus 98 r~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~ 177 (364)
T d1um8a_ 98 ISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 177 (364)
T ss_dssp EEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC
T ss_pred ehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCceec
Confidence 999987754 23332 112224677899997744321 1224456788899988852110
Q ss_pred ---------CCCcEEEEeecCC-------------------------------------------------CCCCCHHHh
Q 012000 336 ---------PNDLVIVMGATNK-------------------------------------------------PQELDDAVL 357 (473)
Q Consensus 336 ---------~~~~v~vI~tTn~-------------------------------------------------~~~Ld~al~ 357 (473)
...+.+++.|+|- +..+.|.++
T Consensus 178 ~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~ 257 (364)
T d1um8a_ 178 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELI 257 (364)
T ss_dssp ---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH
T ss_pred cCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHH
Confidence 1123445555543 123678999
Q ss_pred cccccccccCCCcHHHHHHHHHH-----------HhccCCC--CCChhhHHHHHHH--cCCCCHHHHHHHHHHHHHHh
Q 012000 358 RRLVKRIYVPLPDENVRRLLLKH-----------KLKGQAF--SLPGGDLERLVRE--TEGYSGSDLQALCEEAAMMP 420 (473)
Q Consensus 358 rRf~~~i~~~~P~~~~r~~il~~-----------~l~~~~~--~l~~~~l~~La~~--t~g~s~~dL~~l~~~A~~~a 420 (473)
.||+.++.|...+.+...+|+.. .+...++ .++++.++.||+. ...|-++-|..++++.....
T Consensus 258 gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~GAR~L~riie~~l~~~ 335 (364)
T d1um8a_ 258 GRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDI 335 (364)
T ss_dssp TTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHHH
T ss_pred HHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCCCCCchHHHHHHHHHHHHH
Confidence 99999999999999999888852 2333444 4589999999975 44677888888887765543
No 28
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=3.8e-14 Score=108.49 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHcCCC-CCCCCchhhhHHHHHHHHHHHHHHHHH
Q 012000 52 GYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTP-VPSYISTSEHEKVKSYRQKISKWQSQV 121 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~~~~-~~~~~~~~~~~k~~~y~~raek~k~~i 121 (473)
..+++|++++++||++|+.|+|++|+.+|++|+++|+.+++++ .++..+..++.++.+|++|||++|+++
T Consensus 6 ~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~~l~~~l~~e~~~~~~k~~l~~k~~~Yl~RAE~LK~~l 76 (77)
T d1wr0a1 6 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYL 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHSCCTGGGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999987 466778999999999999999998763
No 29
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.35 E-value=2.6e-13 Score=121.96 Aligned_cols=147 Identities=23% Similarity=0.346 Sum_probs=100.9
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc----------CCcEEEEec
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES----------QATFFNVSA 282 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~----------~~~~~~v~~ 282 (473)
-.++-++|.++..+.|.+.+. +....+++|.||||+|||++++.+|... +.+++.++.
T Consensus 19 g~ld~~igRd~Ei~~l~~iL~------------r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~ 86 (195)
T d1jbka_ 19 GKLDPVIGRDEEIRRTIQVLQ------------RRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86 (195)
T ss_dssp TCSCCCCSCHHHHHHHHHHHT------------SSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH
T ss_pred CCCCCCcCcHHHHHHHHHHHh------------ccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 457789999999999887773 2234689999999999999999999854 578999998
Q ss_pred Cccch--hhhhhhhhhh------------cceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCC
Q 012000 283 SSLTS--KWVGEGEKLV------------RTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNK 348 (473)
Q Consensus 283 ~~l~~--~~~g~~~~~~------------~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~ 348 (473)
+.++. +|.|+.+..+ ..|++||+++.....+.......+.+-|...|. .+.+.||++|..
T Consensus 87 ~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~------rg~l~~IgatT~ 160 (195)
T d1jbka_ 87 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA------RGELHCVGATTL 160 (195)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHH------TTSCCEEEEECH
T ss_pred HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHh------CCCceEEecCCH
Confidence 88764 3444443322 247789999887654332222122233333333 233678888754
Q ss_pred CC-----CCCHHHhcccccccccCCCcHHHHHHHH
Q 012000 349 PQ-----ELDDAVLRRLVKRIYVPLPDENVRRLLL 378 (473)
Q Consensus 349 ~~-----~Ld~al~rRf~~~i~~~~P~~~~r~~il 378 (473)
.+ .-|++|.|||.. |.+..|+.++-..|+
T Consensus 161 eey~~~~e~d~aL~rrF~~-I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 161 DEYRQYIEKDAALERRFQK-VFVAEPSVEDTIAIL 194 (195)
T ss_dssp HHHHHHTTTCHHHHTTEEE-EECCCCCHHHHHTTC
T ss_pred HHHHHHHHcCHHHHhcCCE-eecCCCCHHHHHHHh
Confidence 32 459999999976 899999998876654
No 30
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.33 E-value=2.4e-12 Score=128.28 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=119.5
Q ss_pred CCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc----------CCcEEEEe
Q 012000 212 SVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES----------QATFFNVS 281 (473)
Q Consensus 212 ~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~----------~~~~~~v~ 281 (473)
.-.++-++|.+.-.+.|.+.+. +....++||.||||+|||.+++.+|... +..++.++
T Consensus 18 ~g~ld~~~gr~~ei~~~~~~L~------------r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld 85 (387)
T d1qvra2 18 EGKLDPVIGRDEEIRRVIQILL------------RRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQ 85 (387)
T ss_dssp TTCSCCCCSCHHHHHHHHHHHH------------CSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEEC
T ss_pred cCCCCCCcCcHHHHHHHHHHHh------------cCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEee
Confidence 3467889999999999988774 2224578999999999999999999864 56899999
Q ss_pred cCccch--hhhhhhhhhh------------cceeeeeccccccccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecC
Q 012000 282 ASSLTS--KWVGEGEKLV------------RTLFMIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATN 347 (473)
Q Consensus 282 ~~~l~~--~~~g~~~~~~------------~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn 347 (473)
...++. +|.|+.+..+ ..|++||+++.....+.........+-|...+. .+.+.|||+|.
T Consensus 86 ~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~------rg~~~~I~~tT 159 (387)
T d1qvra2 86 MGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALA------RGELRLIGATT 159 (387)
T ss_dssp C-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHH------TTCCCEEEEEC
T ss_pred HhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHh------CCCcceeeecC
Confidence 988875 3455554433 236789999887655433333333333443443 23367888885
Q ss_pred CCC----CCCHHHhcccccccccCCCcHHHHHHHHHHHhc----cCCCCCChhhHHHHHHHcC-----CCCHHHHHHHHH
Q 012000 348 KPQ----ELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLK----GQAFSLPGGDLERLVRETE-----GYSGSDLQALCE 414 (473)
Q Consensus 348 ~~~----~Ld~al~rRf~~~i~~~~P~~~~r~~il~~~l~----~~~~~l~~~~l~~La~~t~-----g~s~~dL~~l~~ 414 (473)
.-+ .=|++|.|||.. |.++.|+.++-..|++.... .+++.++++.+...+..++ .+-|.-.-.++.
T Consensus 160 ~~ey~~~e~d~al~rrF~~-v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld 238 (387)
T d1qvra2 160 LDEYREIEKDPALERRFQP-VYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLID 238 (387)
T ss_dssp HHHHHHHTTCTTTCSCCCC-EEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHH
T ss_pred HHHHHHhcccHHHHHhccc-ccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHHHHHH
Confidence 311 238999999976 99999999999999886543 4678889998888777544 344666666777
Q ss_pred HHHHHh
Q 012000 415 EAAMMP 420 (473)
Q Consensus 415 ~A~~~a 420 (473)
.|+...
T Consensus 239 ~a~a~~ 244 (387)
T d1qvra2 239 EAAARL 244 (387)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
No 31
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.30 E-value=1.7e-11 Score=124.37 Aligned_cols=70 Identities=30% Similarity=0.443 Sum_probs=55.2
Q ss_pred ccChHHHHHHHHHHHhchhcchhhhhcC--CCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch
Q 012000 218 VAGLEKAKQALMEMVILPAKRRDLFTGL--RRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287 (473)
Q Consensus 218 ivGl~~~k~~L~e~v~~p~~~~~~~~~~--~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~ 287 (473)
|||++++|+.|.-++....++-.+-... .-.+++|||.||||||||.||++||+.+++||+.++|+.+..
T Consensus 16 VvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTe 87 (443)
T d1g41a_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTE 87 (443)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC-
T ss_pred ccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeee
Confidence 8999999999998886443322211111 224679999999999999999999999999999999998754
No 32
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.14 E-value=9.8e-12 Score=117.24 Aligned_cols=67 Identities=24% Similarity=0.337 Sum_probs=53.1
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~ 287 (473)
++|+|.-+.+.+.+.|.+..... .....|++||||||||||||+||++||.+++.+|+.++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQGK--------KAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQ 70 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTC--------CCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHT
T ss_pred cccChHHHHHHHHHHHHHHHhcc--------cCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHH
Confidence 56777777777777776655421 12445789999999999999999999999999999999877654
No 33
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.08 E-value=5.4e-10 Score=104.54 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=115.3
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCccchhh----
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASSLTSKW---- 289 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~l~~~~---- 289 (473)
++||.....+.+.+.+.. .......|||+||+|||||++|++|.... ..+++.+++..+....
T Consensus 1 ~~v~~S~~~~~~~~~~~~----------~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~ 70 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKK----------ISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70 (247)
T ss_dssp CCCCCSHHHHHHHHHHHH----------HTTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHH----------HhCCCCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHH
Confidence 467887777777777652 12224569999999999999999998765 4578888887653321
Q ss_pred -hhh---------------hhhhhcceeeeeccccccccCcchHHHHHHHHHHHHhcC-----cCC--CCCCcEEEEeec
Q 012000 290 -VGE---------------GEKLVRTLFMIDSIMSTRMANENDASRRLKSEFLIQFDG-----VTS--NPNDLVIVMGAT 346 (473)
Q Consensus 290 -~g~---------------~~~~~~~if~IDei~~~~~~~~~~~~~~~~~~ll~~ldg-----~~~--~~~~~v~vI~tT 346 (473)
+|. .+..-...++||+++... ......++..++. +.. .....+.+|++|
T Consensus 71 lfg~~~~~~~~~~~~~~g~l~~a~gGtL~l~~i~~L~--------~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s 142 (247)
T d1ny5a2 71 LFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELS--------LEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAAT 142 (247)
T ss_dssp HHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESGGGCC--------HHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEE
T ss_pred hcCcccCCcCCcccccCCHHHccCCCEEEEeChHhCC--------HHHHHHHHHHHHhCCEEECCCCCceecCeEEEEec
Confidence 111 111223467788884432 3333444444431 110 011235678887
Q ss_pred CCCC-------CCCHHHhcccccccccCCCcHHH----HHHHHHHHhc----cCCC---CCChhhHHHHHHHcCCCCHHH
Q 012000 347 NKPQ-------ELDDAVLRRLVKRIYVPLPDENV----RRLLLKHKLK----GQAF---SLPGGDLERLVRETEGYSGSD 408 (473)
Q Consensus 347 n~~~-------~Ld~al~rRf~~~i~~~~P~~~~----r~~il~~~l~----~~~~---~l~~~~l~~La~~t~g~s~~d 408 (473)
+.+- .+++.+..|+.. +.+..|+..+ ...|+..++. ..+. .+++..+..|.....--.-++
T Consensus 143 ~~~l~~l~~~~~f~~~L~~~l~~-~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~E 221 (247)
T d1ny5a2 143 NRNIKELVKEGKFREDLYYRLGV-IEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRE 221 (247)
T ss_dssp SSCHHHHHHTTSSCHHHHHHHTT-EEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHH
T ss_pred CCCHHHHHHcCCCcHHHHhhcCe-eeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHH
Confidence 6532 356666666653 3344454433 3444454443 2332 356788888876543224579
Q ss_pred HHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHH
Q 012000 409 LQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQK 446 (473)
Q Consensus 409 L~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~ 446 (473)
|.++++.|+..+ +.+.|+.+|+-.
T Consensus 222 L~~~l~~a~~~~--------------~~~~I~~~dl~~ 245 (247)
T d1ny5a2 222 LKNVIERAVLFS--------------EGKFIDRGELSC 245 (247)
T ss_dssp HHHHHHHHHHHC--------------CSSEECHHHHHH
T ss_pred HHHHHHHHHHhC--------------CCCeECHHHccc
Confidence 999999887554 124577777754
No 34
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.04 E-value=3e-10 Score=102.68 Aligned_cols=109 Identities=11% Similarity=0.211 Sum_probs=79.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcC------CcEEEEecCccchhhhhhhhh-----------hhcceeeeeccccccc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQ------ATFFNVSASSLTSKWVGEGEK-----------LVRTLFMIDSIMSTRM 311 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~------~~~~~v~~~~l~~~~~g~~~~-----------~~~~if~IDei~~~~~ 311 (473)
+.++|||||||||||++|..+++... ..++.+.+..-. --+.+.+. .-+.++.||+++.+
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~-I~Id~IR~i~~~~~~~~~~~~~KviIId~ad~l-- 91 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGEN-IGIDDIRTIKDFLNYSPELYTRKYVIVHDCERM-- 91 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSC-BCHHHHHHHHHHHTSCCSSSSSEEEEETTGGGB--
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCC-CCHHHHHHHHHHHhhCcccCCCEEEEEeCcccc--
Confidence 56899999999999999999998763 247777654210 01111111 12358889999443
Q ss_pred cCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCCCCCHHHhcccccccccCCCcH
Q 012000 312 ANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQELDDAVLRRLVKRIYVPLPDE 371 (473)
Q Consensus 312 ~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~~Ld~al~rRf~~~i~~~~P~~ 371 (473)
.....+.||..|+ .++.++++|.+|+.+..|.+.+++||.. +.++.|..
T Consensus 92 ------~~~aqNaLLK~LE----EPp~~t~fiLit~~~~~ll~TI~SRC~~-i~~~~p~~ 140 (198)
T d2gnoa2 92 ------TQQAANAFLKALE----EPPEYAVIVLNTRRWHYLLPTIKSRVFR-VVVNVPKE 140 (198)
T ss_dssp ------CHHHHHHTHHHHH----SCCTTEEEEEEESCGGGSCHHHHTTSEE-EECCCCHH
T ss_pred ------chhhhhHHHHHHh----CCCCCceeeeccCChhhCHHHHhcceEE-EeCCCchH
Confidence 4556788898888 4566788999999999999999999964 78887764
No 35
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.80 E-value=4e-08 Score=91.48 Aligned_cols=181 Identities=12% Similarity=0.096 Sum_probs=106.6
Q ss_pred CCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchh
Q 012000 209 RSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK 288 (473)
Q Consensus 209 ~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~ 288 (473)
..|...-++++|.++..+.|.+. ..+.++|+||+|+|||+|++.++.+.+..+..+++......
T Consensus 5 ~~p~~~~~~f~GR~~el~~l~~~----------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~ 68 (283)
T d2fnaa2 5 TSPKDNRKDFFDREKEIEKLKGL----------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEER 68 (283)
T ss_dssp SSCCCSGGGSCCCHHHHHHHHHT----------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTC
T ss_pred CCCCCChhhCCChHHHHHHHHhc----------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEecccccc
Confidence 34666789999999988887642 13579999999999999999999999988887775433111
Q ss_pred h----------hhhh----hh---------------------------------------------hhcceeeeeccccc
Q 012000 289 W----------VGEG----EK---------------------------------------------LVRTLFMIDSIMST 309 (473)
Q Consensus 289 ~----------~g~~----~~---------------------------------------------~~~~if~IDei~~~ 309 (473)
. +... .. ..+.++.+|++...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~ 148 (283)
T d2fnaa2 69 NYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQEL 148 (283)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGG
T ss_pred ccccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhh
Confidence 0 0000 00 00112335555443
Q ss_pred cccCcchHHHHHHHHHHHHhcCcCCCCCCcEEEEeecCCCC---------CCCHHHhcccccccccCCCcHHHHHHHHHH
Q 012000 310 RMANENDASRRLKSEFLIQFDGVTSNPNDLVIVMGATNKPQ---------ELDDAVLRRLVKRIYVPLPDENVRRLLLKH 380 (473)
Q Consensus 310 ~~~~~~~~~~~~~~~ll~~ldg~~~~~~~~v~vI~tTn~~~---------~Ld~al~rRf~~~i~~~~P~~~~r~~il~~ 380 (473)
........ ...+...+.. ...+..+.+..... .....+..|+...+.++..+.++..+++..
T Consensus 149 ~~~~~~~~----~~~l~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~ 219 (283)
T d2fnaa2 149 VKLRGVNL----LPALAYAYDN-----LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRR 219 (283)
T ss_dssp GGCTTCCC----HHHHHHHHHH-----CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHH
T ss_pred cccchHHH----HHHHHHHHHh-----hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHh
Confidence 32221111 1111111111 11133333322111 111222334556688999999999999998
Q ss_pred HhccCCCCCChhhHHHHHHHcCCCCHHHHHHHHHHHH
Q 012000 381 KLKGQAFSLPGGDLERLVRETEGYSGSDLQALCEEAA 417 (473)
Q Consensus 381 ~l~~~~~~l~~~~l~~La~~t~g~s~~dL~~l~~~A~ 417 (473)
.+...++. .++++.+.+.+.|. +..|..++..+.
T Consensus 220 ~~~~~~~~--~~~~~~i~~~~~G~-P~~L~~~~~~~~ 253 (283)
T d2fnaa2 220 GFQEADID--FKDYEVVYEKIGGI-PGWLTYFGFIYL 253 (283)
T ss_dssp HHHHHTCC--CCCHHHHHHHHCSC-HHHHHHHHHHHH
T ss_pred hhhhcCCC--HHHHHHHHHHhCCC-HHHHHHHHHHHH
Confidence 88776654 44578899999994 777777766543
No 36
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.19 E-value=8.3e-07 Score=76.70 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=32.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCcc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l 285 (473)
+-|+|.|||||||||+|++++++++.+++.++...+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 458899999999999999999999999999887554
No 37
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.16 E-value=5.6e-07 Score=76.43 Aligned_cols=31 Identities=29% Similarity=0.708 Sum_probs=28.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
+.|+|.|||||||||+|+.||..++.+|+..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~ 33 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS 33 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 5799999999999999999999999998743
No 38
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=98.15 E-value=3.5e-07 Score=79.54 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=32.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCcc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l 285 (473)
++.|+|.|||||||||||++||+.++.+++......+
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~ 43 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREF 43 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHH
Confidence 4789999999999999999999999999886655443
No 39
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=98.04 E-value=9.6e-07 Score=75.97 Aligned_cols=30 Identities=50% Similarity=0.757 Sum_probs=27.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.|+|.|||||||||+|++||..++.+++.+
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~~ 35 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYINV 35 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEec
Confidence 589999999999999999999999998864
No 40
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.97 E-value=1.7e-06 Score=74.62 Aligned_cols=32 Identities=28% Similarity=0.585 Sum_probs=29.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
++|+|.||||+||||+++++|+.+|.+|+.++
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 35899999999999999999999999999653
No 41
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.93 E-value=2.2e-06 Score=74.29 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=28.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
+.|+|.|||||||||+++.+|+.+|.+|+..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4689999999999999999999999999864
No 42
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.90 E-value=4.3e-06 Score=71.87 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=31.6
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASS 284 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~ 284 (473)
.+-|+|+||||+||||+|++|+++++..++.++...
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d~ 38 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDS 38 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecch
Confidence 357899999999999999999999999988876543
No 43
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.86 E-value=4.4e-06 Score=71.73 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=28.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
++-++|+|||||||||+|++||+.++.+++..+
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 456789999999999999999999998877543
No 44
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.86 E-value=2.5e-05 Score=67.30 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=23.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQAT 276 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~ 276 (473)
.|+|.||||||||||+++++..+..+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~ 27 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKR 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCC
Confidence 48999999999999999999987543
No 45
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.85 E-value=3.8e-06 Score=72.42 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=27.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
|+|.|+|||||||+++.+|..++.+|+..+
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 777799999999999999999999998643
No 46
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.79 E-value=8.3e-06 Score=70.03 Aligned_cols=30 Identities=33% Similarity=0.540 Sum_probs=25.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
+..|+|.||||+||||+|+.||..++...+
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~~~~ 34 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDGFQH 34 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTTEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHhCCCcE
Confidence 456999999999999999999999875333
No 47
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.79 E-value=6.4e-06 Score=70.37 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=25.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
+-|+|.|||||||||+|+.||.+++..++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 45899999999999999999999987654
No 48
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76 E-value=6e-06 Score=71.24 Aligned_cols=24 Identities=42% Similarity=0.661 Sum_probs=22.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 689999999999999999999886
No 49
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.71 E-value=5e-06 Score=73.17 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=30.1
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~ 287 (473)
|..|+|.|||||||||+|+.||+.++..++ +..+++.
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i--s~~~~~~ 39 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI--SAGDLLR 39 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC--CHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE--ehhHHHH
Confidence 456999999999999999999999988776 4444443
No 50
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.71 E-value=1.2e-05 Score=70.84 Aligned_cols=31 Identities=16% Similarity=0.350 Sum_probs=27.6
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFN 279 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~ 279 (473)
|.-|+|.||||+||||+|+.||+.+|...+.
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 5678999999999999999999999976664
No 51
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.67 E-value=1.3e-05 Score=69.58 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=27.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.|+|.|||||||||+|+.||+++|..++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~ 31 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceech
Confidence 389999999999999999999999887754
No 52
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.63 E-value=0.00024 Score=66.22 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=36.0
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHH
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
+++|.+..++.|.+.+..- .......|.|||++|+|||+||+.++++
T Consensus 21 ~~~gR~~~~~~i~~~L~~~---------~~~~~~~v~I~GmgGiGKTtLA~~v~~~ 67 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEM---------CDLDSFFLFLHGRAGSGKSVIASQALSK 67 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHH---------TTSSSEEEEEECSTTSSHHHHHHHHHHH
T ss_pred ceeCcHHHHHHHHHHHHhc---------cCCCceEEEEECCCCCCHHHHHHHHHHh
Confidence 4679999888888877421 1122356789999999999999999876
No 53
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.62 E-value=2.1e-05 Score=69.05 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=28.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLT 286 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~ 286 (473)
.-|+|.|||||||||+|+.||..+|..++.+ .+++
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~~--gdll 38 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT--GDML 38 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEH--HHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeH--HHHH
Confidence 3477899999999999999999998777653 4444
No 54
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.60 E-value=1.4e-05 Score=69.57 Aligned_cols=30 Identities=33% Similarity=0.521 Sum_probs=26.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.|+|.|||||||||+|+.||+.++...+.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEch
Confidence 488999999999999999999999877754
No 55
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.58 E-value=9.1e-06 Score=69.85 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=23.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
..|+|+|+||+||||+|++||..++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 45889999999999999999999854
No 56
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.58 E-value=1.8e-05 Score=69.80 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=28.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccch
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~ 287 (473)
-|+|.||||+||||+|+.||..+|..++ +..+++.
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g~~~i--s~gdllr 42 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFELKHL--SSGDLLR 42 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBCCEEE--EHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCCeEE--cHHHHHH
Confidence 5888999999999999999999997766 4445543
No 57
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.57 E-value=2.3e-05 Score=69.14 Aligned_cols=38 Identities=21% Similarity=0.384 Sum_probs=30.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccchh
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK 288 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~~~ 288 (473)
++-|+|.|||||||||+|+.||+.+|.+++ +..+++..
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~llr~ 45 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLLRA 45 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCeeE--eccHHHHH
Confidence 456899999999999999999999987665 44555443
No 58
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.57 E-value=2.2e-05 Score=69.27 Aligned_cols=31 Identities=16% Similarity=0.382 Sum_probs=27.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.-|+|.||||+||||+|+.||+.+|..++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeh
Confidence 4588999999999999999999998877653
No 59
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.55 E-value=2.5e-05 Score=68.09 Aligned_cols=30 Identities=23% Similarity=0.465 Sum_probs=27.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.|+|.|||||||||+|+.||..++..++.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeH
Confidence 388999999999999999999999887754
No 60
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.54 E-value=2.5e-05 Score=68.08 Aligned_cols=30 Identities=30% Similarity=0.555 Sum_probs=26.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
-|+|.|||||||||+|+.||.+++..++..
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceEec
Confidence 478899999999999999999998776644
No 61
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.52 E-value=3e-05 Score=68.09 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=28.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLT 286 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~ 286 (473)
.-|+|.||||+||||.|+.||+.+|...+ +..+++
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i--~~g~ll 36 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHL--SAGELL 36 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEE--EHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceE--cHHHHH
Confidence 45899999999999999999999987665 444443
No 62
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.49 E-value=2.7e-05 Score=65.24 Aligned_cols=35 Identities=26% Similarity=0.571 Sum_probs=26.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCcc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l 285 (473)
+-|+|+||||+||||+|+.++.+.. .++.++..++
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~ 37 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDY 37 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechHHH
Confidence 3588999999999999999977653 3445554444
No 63
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.47 E-value=3.4e-05 Score=66.95 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=26.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
.|+|.||||+||||+|+.||+.++..++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceech
Confidence 378999999999999999999999877753
No 64
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.46 E-value=8.7e-06 Score=71.30 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=24.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
+.-|+|+|+||+||||+|++||..++..++
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 345779999999999999999998864433
No 65
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.45 E-value=4e-05 Score=68.40 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=28.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCccc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLT 286 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l~ 286 (473)
-|.+.|||||||+|+|+.||+++|.+++ +..++.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~i--StGdLl 38 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLL--DSGAIY 38 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEE--EHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEE--CHHHHH
Confidence 5778899999999999999999998876 445553
No 66
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.44 E-value=4e-05 Score=66.50 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=26.4
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
..|.-|||+|+|||||||+|+.++...+..++
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~~~i 43 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHV 43 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTCEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCCEEE
Confidence 34567999999999999999999887775544
No 67
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.34 E-value=9.1e-05 Score=65.33 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC---CcEEEEec
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ---ATFFNVSA 282 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~---~~~~~v~~ 282 (473)
.-|+|+|.||+||||+|++||+.++ .....++.
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~ 38 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNV 38 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEcc
Confidence 4588999999999999999998874 34444444
No 68
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.33 E-value=6.1e-05 Score=67.39 Aligned_cols=28 Identities=29% Similarity=0.560 Sum_probs=25.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEE
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFN 279 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~ 279 (473)
|.+-|||||||||+|+.||.++|.++++
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 4577999999999999999999988775
No 69
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.33 E-value=0.00047 Score=60.59 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=28.5
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
...+.++|||||+||||++|.+|++-++..++..
T Consensus 51 PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vis~ 84 (205)
T d1tuea_ 51 PKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISF 84 (205)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHHTCEECCC
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHhCCEEEec
Confidence 3357899999999999999999999998765543
No 70
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.13 E-value=0.00027 Score=62.90 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=25.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
++-++|.||+|+||||.+--+|..+ +..+..+.+.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~D 43 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGD 43 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4678999999999999877777654 4455444443
No 71
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.05 E-value=0.001 Score=64.26 Aligned_cols=20 Identities=35% Similarity=0.519 Sum_probs=16.7
Q ss_pred ceEEEEcCCCCcHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAV 269 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~ai 269 (473)
+-.+|+||||||||+++..+
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHH
Confidence 46899999999999987554
No 72
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.01 E-value=0.00015 Score=62.17 Aligned_cols=25 Identities=20% Similarity=0.368 Sum_probs=22.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+-|+|.|||||||||+++.|+..++
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999874
No 73
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.94 E-value=0.00019 Score=60.70 Aligned_cols=30 Identities=23% Similarity=0.078 Sum_probs=24.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHc---CCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASES---QATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v 280 (473)
-+.|.|+||||||||++.+++++ |..+..+
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~ 36 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLI 36 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEe
Confidence 58899999999999999999876 4444433
No 74
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.86 E-value=0.0011 Score=59.56 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=27.8
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
.+..-++|+||||||||+||..+|... +..++.++.
T Consensus 24 ~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~ 62 (242)
T d1tf7a2 24 FKDSIILATGATGTGKTLLVSRFVENACANKERAILFAY 62 (242)
T ss_dssp ESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeec
Confidence 445678999999999999999998875 445555543
No 75
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.84 E-value=0.00036 Score=62.18 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=30.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc----CCcEEEEecCcc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES----QATFFNVSASSL 285 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~----~~~~~~v~~~~l 285 (473)
+.-|+|+|.||+||||+|++|+..+ +.+++.+++..+
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i 64 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 64 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH
Confidence 4568999999999999999999765 567777776554
No 76
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.73 E-value=0.00046 Score=61.59 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=26.2
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
.+|.-++|.||+|+||||.+--+|..+ +..+..+.+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~D 48 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAAD 48 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeec
Confidence 346678999999999999877777654 4444444433
No 77
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.70 E-value=0.004 Score=55.12 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=27.1
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCc
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASS 284 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~ 284 (473)
.|.-++|.||+|+||||.+--+|..+ +..+..+.+..
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt 47 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDT 47 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeccc
Confidence 35678899999999999888788654 45555555443
No 78
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.69 E-value=0.00055 Score=59.60 Aligned_cols=28 Identities=36% Similarity=0.667 Sum_probs=24.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATF 277 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~ 277 (473)
+.|+|+||+|+|||+|++.++++....|
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 3599999999999999999999876544
No 79
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.69 E-value=0.00023 Score=61.30 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=22.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
-++|.|+||+||||+++.||..++.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~ 27 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4788999999999999999998853
No 80
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.68 E-value=0.00053 Score=59.93 Aligned_cols=28 Identities=36% Similarity=0.548 Sum_probs=24.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
.|+|.||+|+|||+|++.++.+.+..|.
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCcee
Confidence 4899999999999999999998876554
No 81
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=96.61 E-value=0.00066 Score=59.02 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=23.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
-|-|+|++|+||||+|+.+ .+.|.+++..
T Consensus 5 IIgitG~~gSGKstva~~l-~~~g~~~~~~ 33 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALL-RSWGYPVLDL 33 (191)
T ss_dssp EEEEEECTTSCHHHHHHHH-HHTTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCCeEEEc
Confidence 3558999999999999999 5688887753
No 82
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.53 E-value=0.0012 Score=56.97 Aligned_cols=24 Identities=29% Similarity=0.284 Sum_probs=21.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
-|-+.||+|+||||||+.|+..++
T Consensus 24 iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 24 VLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 355999999999999999998764
No 83
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.48 E-value=0.0057 Score=44.71 Aligned_cols=61 Identities=21% Similarity=0.165 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHcCCCCCCCCchhhhHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKI 114 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~~~~~~~~~~~~~~~k~~~y~~ra 114 (473)
++.|--+=.+|=..-..|.|++||.||++|..+|.++++.+++.....++.-....++.-.
T Consensus 5 LN~AH~~~RrAer~l~~~rydeAIech~kA~~yl~eA~klt~s~~~l~SLqLQ~~~hlKQ~ 65 (83)
T d2crba1 5 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHLSLELQRDSHMKQL 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 4556666678888888999999999999999999999998877776666666665555443
No 84
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.48 E-value=0.0022 Score=56.92 Aligned_cols=35 Identities=26% Similarity=0.143 Sum_probs=20.9
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
.|.-++|.||+|+||||.+--+|..+ +..+-.+.+
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 48 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGA 48 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 35668899999999999877777654 444444443
No 85
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.40 E-value=0.00085 Score=58.41 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=24.1
Q ss_pred CCCCCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 245 LRRPARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 245 ~~~~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
+..+..-++|+||||+|||+||..+|...
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33455679999999999999999998764
No 86
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.38 E-value=0.0045 Score=54.72 Aligned_cols=36 Identities=28% Similarity=0.225 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASS 284 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~ 284 (473)
++-++|.||+|+||||.+--+|..+ +..+..+++..
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt 48 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 48 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeccc
Confidence 3457889999999999888787655 55555555443
No 87
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.18 E-value=0.00091 Score=59.76 Aligned_cols=26 Identities=27% Similarity=0.310 Sum_probs=21.9
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHH
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.+..-++|+||||||||+|+..+|..
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTTT
T ss_pred cCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 44567999999999999999988754
No 88
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.15 E-value=0.0016 Score=56.02 Aligned_cols=26 Identities=23% Similarity=0.442 Sum_probs=22.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
+-|+|.||+|+|||||++.++.+...
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~~ 28 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIPN 28 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCCC
Confidence 45889999999999999999988753
No 89
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0017 Score=58.23 Aligned_cols=28 Identities=21% Similarity=0.192 Sum_probs=23.2
Q ss_pred CCCCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 246 RRPARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 246 ~~~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..+..-++|+||||||||++|..+|...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 3445678999999999999999998753
No 90
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.05 E-value=0.0015 Score=58.81 Aligned_cols=27 Identities=33% Similarity=0.357 Sum_probs=22.6
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.+..-++|+||||||||+++..+|...
T Consensus 34 p~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 34 ETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred cCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 344568999999999999999888754
No 91
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.03 E-value=0.015 Score=47.69 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|+||+|||+|++.+...
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 789999999999999999764
No 92
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.88 E-value=0.0094 Score=49.77 Aligned_cols=22 Identities=36% Similarity=0.537 Sum_probs=19.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
.|+|.|+||+|||+|++.+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 4899999999999999999764
No 93
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=95.82 E-value=0.0069 Score=50.97 Aligned_cols=29 Identities=28% Similarity=0.280 Sum_probs=25.4
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcCCc
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQAT 276 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~~~ 276 (473)
|..-|+|.|+=|+|||+++|.+++.+|..
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 34458899999999999999999999875
No 94
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.78 E-value=0.01 Score=48.05 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.8
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSAS 283 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~ 283 (473)
.+..+|.+|+|+|||+++-.++.+.+..++.+-..
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~ 42 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPS 42 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcCh
Confidence 35789999999999999877777777776666554
No 95
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.77 E-value=0.0067 Score=59.15 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=46.0
Q ss_pred CCCCCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcC---CcEEEEe
Q 012000 209 RSPSVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQ---ATFFNVS 281 (473)
Q Consensus 209 ~~~~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~---~~~~~v~ 281 (473)
..+..+++++.-.+...+.+++++.. +..-+|+.||+|+||||+..++..+++ .+++.+.
T Consensus 131 ~~~~~~l~~LG~~~~~~~~l~~l~~~-------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiE 193 (401)
T d1p9ra_ 131 NATRLDLHSLGMTAHNHDNFRRLIKR-------------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVE 193 (401)
T ss_dssp TTTCCCGGGSCCCHHHHHHHHHHHTS-------------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEE
T ss_pred cccchhhhhhcccHHHHHHHHHHHhh-------------hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEec
Confidence 34456899998888999898887742 233478999999999999999988763 4556554
No 96
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.76 E-value=0.0028 Score=55.84 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=22.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQAT 276 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~ 276 (473)
-|-|.||+|+||||+|+.|+..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh
Confidence 35689999999999999999998653
No 97
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.73 E-value=0.0036 Score=53.77 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=25.6
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFN 279 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~ 279 (473)
.+|+||.||+|+|||++|.++... |..++.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 579999999999999999998875 766654
No 98
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.71 E-value=0.0029 Score=53.44 Aligned_cols=31 Identities=19% Similarity=0.091 Sum_probs=24.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEe
Q 012000 251 GLLLFGPPGNGKTMLAKAVASES---QATFFNVS 281 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~ 281 (473)
-+-+.|++|+|||||+..++.++ |..+..+.
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 35699999999999999999876 44555443
No 99
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.69 E-value=0.011 Score=54.80 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=26.7
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc------CCcEEEEecCcc
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES------QATFFNVSASSL 285 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~------~~~~~~v~~~~l 285 (473)
..|--|-|.|++|||||||+..|...+ ...+..++..++
T Consensus 25 ~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 25 KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 333345589999999999999887664 334555555444
No 100
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.59 E-value=0.0053 Score=54.12 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=26.5
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHH----cCCcEEEEecC
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASE----SQATFFNVSAS 283 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e----~~~~~~~v~~~ 283 (473)
.+..-++|+||||+|||+||..+|.. -+..++.++..
T Consensus 24 ~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e 64 (242)
T d1tf7a1 24 PIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFE 64 (242)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESS
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCccccccc
Confidence 44567899999999999999766532 24556666554
No 101
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.53 E-value=0.022 Score=52.18 Aligned_cols=35 Identities=31% Similarity=0.444 Sum_probs=27.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
.+-..++||||||||+||..++..+ +..++.++..
T Consensus 57 g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE 94 (268)
T d1xp8a1 57 GRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE 94 (268)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECC
Confidence 3557899999999999999987654 6677777755
No 102
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.51 E-value=0.0033 Score=55.91 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=23.0
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.+..-++|+||||+|||+++..+|..+
T Consensus 32 ~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 32 ESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp ETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 344668999999999999999998765
No 103
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.45 E-value=0.015 Score=53.24 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=27.8
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASS 284 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~ 284 (473)
.+-..|+||||||||++|..++... +...+.++...
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCc
Confidence 4568899999999999998776543 67777777554
No 104
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.44 E-value=0.0058 Score=52.52 Aligned_cols=28 Identities=21% Similarity=0.536 Sum_probs=23.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATF 277 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~ 277 (473)
+.|+|.||+|+||++|++.+.++....|
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcCe
Confidence 5699999999999999999998764433
No 105
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=95.34 E-value=0.023 Score=47.61 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
..-|+|.|.||+|||+|+.++...
T Consensus 15 ~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 15 EHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTT
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 356999999999999999998764
No 106
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=95.30 E-value=0.0048 Score=53.01 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=25.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFN 279 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~ 279 (473)
..|+||.||+|+|||++|..+... |..++.
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lva 44 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVG 44 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceec
Confidence 579999999999999999998754 666554
No 107
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.25 E-value=0.0072 Score=57.11 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=22.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+++|+.||+|+||||+.++++....
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CCEEEEeeccccchHHHHHHhhhcc
Confidence 5799999999999999999998774
No 108
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=95.23 E-value=0.0064 Score=51.83 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=24.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
..|+||.|++|+|||++|-++... |..++
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 579999999999999999888776 55544
No 109
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.23 E-value=0.018 Score=52.44 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=27.0
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHH----cCCcEEEEec
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASE----SQATFFNVSA 282 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e----~~~~~~~v~~ 282 (473)
.+..-++|.|+||+|||+++..+|.. .+.++..++.
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 34456899999999999998888753 3667666654
No 110
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.10 E-value=0.0072 Score=53.18 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+-++|.||+|+|||+|.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3488999999999999999998865
No 111
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.99 E-value=0.027 Score=46.93 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|++|+|||+|+..+...
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3899999999999999999863
No 112
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=94.88 E-value=0.011 Score=53.97 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=28.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASS 284 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~ 284 (473)
.+-+.|+||||||||+||..++..+ +..++.++...
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~ 92 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEH 92 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 4568899999999999999887655 56677777654
No 113
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=94.87 E-value=0.013 Score=54.70 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=29.9
Q ss_pred CCCCceEEEEcCCCCcHHHHHHHHHHHcC-----CcEEEEecCcc
Q 012000 246 RRPARGLLLFGPPGNGKTMLAKAVASESQ-----ATFFNVSASSL 285 (473)
Q Consensus 246 ~~~~~~iLL~GPpGtGKT~La~aiA~e~~-----~~~~~v~~~~l 285 (473)
.+.|--|-+.|++|+||||+|+.|+..+. ..+..++..++
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 34455677999999999999999999874 34555555554
No 114
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=94.81 E-value=0.0072 Score=52.97 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=23.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
|-|+|++||||||+|+.+. +.|.+++..
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vida 32 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDA 32 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEEc
Confidence 4589999999999999886 689888754
No 115
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.80 E-value=0.0075 Score=49.57 Aligned_cols=21 Identities=33% Similarity=0.558 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|+||+|||+|+..+...
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999874
No 116
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=94.79 E-value=0.028 Score=44.72 Aligned_cols=19 Identities=32% Similarity=0.165 Sum_probs=16.0
Q ss_pred CceEEEEcCCCCcHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~ 267 (473)
...++|++|||+|||..+-
T Consensus 7 ~~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp TCEEEECCCTTSSTTTTHH
T ss_pred CCcEEEEcCCCCChhHHHH
Confidence 4679999999999996653
No 117
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.77 E-value=0.0076 Score=53.54 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=22.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHHc--CCcEEEE
Q 012000 252 LLLFGPPGNGKTMLAKAVASES--QATFFNV 280 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~--~~~~~~v 280 (473)
+++.||+|+|||||+.++.+.+ +.....|
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 7899999999999999998765 3344444
No 118
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=94.76 E-value=0.0078 Score=52.86 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=23.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEE
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFN 279 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~ 279 (473)
|-|+|++|+||||+|+.+. +.|.+++.
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vid 32 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVID 32 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEE
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEE
Confidence 5589999999999999886 77887775
No 119
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=94.74 E-value=0.012 Score=53.95 Aligned_cols=28 Identities=36% Similarity=0.528 Sum_probs=24.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQAT 276 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~ 276 (473)
...++|+|||+||||+++.+|+.-+|..
T Consensus 104 ~n~~~l~G~~~tGKS~f~~~i~~~lg~~ 131 (267)
T d1u0ja_ 104 RNTIWLFGPATTGKTNIAEAIAHTVPFY 131 (267)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSSCE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHhcch
Confidence 4678999999999999999999998643
No 120
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.69 E-value=0.0071 Score=52.20 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=25.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
|.-|.|.|+.|+||||+++.|++.++...+
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 456889999999999999999999876544
No 121
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=94.66 E-value=0.026 Score=47.46 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=20.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
..|+|.|+||+|||+|++.+...
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 46999999999999999998753
No 122
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.65 E-value=0.0088 Score=52.11 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=20.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
+.|+|.|+||+|||+|.+++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999863
No 123
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=94.63 E-value=0.0087 Score=49.56 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=20.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|+||+|||+|.+++...
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999764
No 124
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=94.42 E-value=0.0099 Score=54.72 Aligned_cols=17 Identities=29% Similarity=0.432 Sum_probs=14.5
Q ss_pred ceEEEEcCCCCcHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La 266 (473)
..+|+.||||||||+++
T Consensus 15 ~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SEEEECCCTTSCHHHHH
T ss_pred CCEEEEeeCCccHHHHH
Confidence 45899999999999754
No 125
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=94.42 E-value=0.047 Score=45.64 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=19.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|+|.|.+|+|||+|++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999999876
No 126
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.36 E-value=0.0087 Score=52.72 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=24.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHHc---CCcEEEEe
Q 012000 252 LLLFGPPGNGKTMLAKAVASES---QATFFNVS 281 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~ 281 (473)
|.|.||.|+||||+++.|++.+ |.+++.+.
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 5566999999999999999876 55665553
No 127
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.32 E-value=0.038 Score=48.17 Aligned_cols=62 Identities=21% Similarity=0.305 Sum_probs=42.2
Q ss_pred cccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecC-ccchhhhhhh
Q 012000 217 DVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSAS-SLTSKWVGEG 293 (473)
Q Consensus 217 divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~-~l~~~~~g~~ 293 (473)
++-..+.+++.+..++. ....+|.+|+|+|||.++-+++.+++.+.+.+-+. .+...|..+.
T Consensus 68 ~~~Lr~yQ~eav~~~~~---------------~~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p~~~L~~q~~~~~ 130 (206)
T d2fz4a1 68 EISLRDYQEKALERWLV---------------DKRGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERL 130 (206)
T ss_dssp CCCCCHHHHHHHHHHTT---------------TSEEEEEESSSTTHHHHHHHHHHHSCSCEEEEESSHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHh---------------CCCcEEEeCCCCCceehHHhHHHHhcCceeEEEcccchHHHHHHHH
Confidence 34456667776665442 12456889999999999999999998777666553 4555554443
No 128
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.31 E-value=0.011 Score=49.65 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=20.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~ 271 (473)
..-|+|.|+||+|||+|..++..
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 34599999999999999999854
No 129
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=94.25 E-value=0.044 Score=46.32 Aligned_cols=23 Identities=26% Similarity=0.417 Sum_probs=19.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~ 271 (473)
.--|+|.|+||+|||+|++.+..
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHTCC
T ss_pred eEEEEEECCCCCCHHHHHHHHhc
Confidence 35699999999999999998753
No 130
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.21 E-value=0.012 Score=49.67 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|++.|+||||||+|++.+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 889999999999999998764
No 131
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.13 E-value=0.045 Score=48.89 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.+.++|+||.++|||++.|.+|--
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHH
T ss_pred ceEEEEeccCchhhHHHHHHHHHH
Confidence 367999999999999999998763
No 132
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.07 E-value=0.064 Score=44.54 Aligned_cols=22 Identities=27% Similarity=0.474 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3899999999999999998764
No 133
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.06 E-value=0.056 Score=46.65 Aligned_cols=18 Identities=50% Similarity=0.739 Sum_probs=15.7
Q ss_pred ceEEEEcCCCCcHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~ 267 (473)
+.+++.+|+|+|||+.+-
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 569999999999998763
No 134
>d2a9ua1 a.118.23.1 (A:6-139) Ubiquitin carboxyl-terminal hydrolase 8, USH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.00 E-value=0.12 Score=41.84 Aligned_cols=80 Identities=13% Similarity=0.107 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHcCCCCCC-----CCchh-hhHHHHHHHHHHHHHHHHHH
Q 012000 49 KLKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPS-----YISTS-EHEKVKSYRQKISKWQSQVS 122 (473)
Q Consensus 49 ~~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~~~~~~~-----~~~~~-~~~k~~~y~~raek~k~~i~ 122 (473)
.++.|+..|..++..|-...+.|+.+.|+.+|.+-+.+|...-+.+ +- ..... ....+..-++++|+++..++
T Consensus 27 ~~k~y~rsa~~l~~~A~~y~~egd~E~AYily~Ry~~L~eki~kHp-dyk~~~~~~~~~l~~~~~~~~l~~~E~Lk~~L~ 105 (134)
T d2a9ua1 27 STKSYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKRP-DFKQQQDYFHSILGPGNIKKAVEEAERLSESLK 105 (134)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSH-HHHHTHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCc-ccccchhHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999984433322 11 11111 12345667899999999998
Q ss_pred HHHHHHh
Q 012000 123 DRLQALN 129 (473)
Q Consensus 123 ~rl~~l~ 129 (473)
+|-+...
T Consensus 106 ~rYe~~~ 112 (134)
T d2a9ua1 106 LRYEEAE 112 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 135
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.98 E-value=0.019 Score=51.10 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=26.3
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
|+-|.|-|+-||||||+++.|++.++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 567899999999999999999999876554
No 136
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.96 E-value=0.015 Score=50.26 Aligned_cols=22 Identities=27% Similarity=0.622 Sum_probs=20.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
.|+|.|+||+|||+|..++.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7999999999999999999875
No 137
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.90 E-value=0.017 Score=51.72 Aligned_cols=26 Identities=27% Similarity=0.509 Sum_probs=22.2
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
..-+-|.||.|||||||.+.++.-..
T Consensus 26 Gei~~liGpsGsGKSTLl~~i~Gl~~ 51 (232)
T d2awna2 26 GEFVVFVGPSGCGKSTLLRMIAGLET 51 (232)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHhcCCC
Confidence 34688999999999999999998653
No 138
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.86 E-value=0.014 Score=52.48 Aligned_cols=23 Identities=30% Similarity=0.642 Sum_probs=20.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcC
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+.|.||.|||||||.+.|+....
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~~ 49 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIVK 49 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSC
T ss_pred EEEECCCCChHHHHHHHHHcCCC
Confidence 45789999999999999998763
No 139
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=93.86 E-value=0.015 Score=52.84 Aligned_cols=24 Identities=38% Similarity=0.486 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
..-.+|+|+||+|||+|+..+|..
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHH
Confidence 456889999999999999988765
No 140
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.85 E-value=0.016 Score=48.40 Aligned_cols=20 Identities=15% Similarity=0.355 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|+||+|||+|++.+..
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999998886
No 141
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=93.84 E-value=0.015 Score=52.04 Aligned_cols=25 Identities=20% Similarity=0.476 Sum_probs=21.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
...+-|.||+|||||||.+.++.-.
T Consensus 31 Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 31 GEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCcchhhHhccCCC
Confidence 3468899999999999999998754
No 142
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=93.82 E-value=0.016 Score=48.35 Aligned_cols=22 Identities=36% Similarity=0.434 Sum_probs=19.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|++|+|||+|++.+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4889999999999999999763
No 143
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=93.81 E-value=0.014 Score=52.00 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=25.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCcc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l 285 (473)
-|-|+|+.||||||+|+.++..+|.. .++.++.
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~~--~i~~aD~ 35 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSAV--KYQLAGP 35 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCEE--ECCTTHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCe--EEcccHH
Confidence 36799999999999999999988754 4444443
No 144
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.76 E-value=0.017 Score=50.42 Aligned_cols=24 Identities=25% Similarity=0.343 Sum_probs=21.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
+-|.|.|++|+||||+++.+++.+
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 357888999999999999999876
No 145
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.75 E-value=0.014 Score=50.98 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=21.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..-+.|.||.|+|||||.+.++..+
T Consensus 27 Gei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 27 GNVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp TCCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCChHHHHHHHHhccc
Confidence 3457899999999999999999765
No 146
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.71 E-value=0.017 Score=48.46 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=19.4
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|++|+|||+|++.+...
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999999863
No 147
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.64 E-value=0.018 Score=48.15 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999999874
No 148
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=93.63 E-value=0.016 Score=52.08 Aligned_cols=25 Identities=32% Similarity=0.566 Sum_probs=21.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
.-+-|.||.|||||||+++++.-..
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcCCC
Confidence 4578999999999999999997653
No 149
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.60 E-value=0.019 Score=48.04 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=19.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|.||+|||+|++.+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999999863
No 150
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=93.57 E-value=0.018 Score=53.44 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=16.6
Q ss_pred ceEEEEcCCCCcHHHHH-HHHHH
Q 012000 250 RGLLLFGPPGNGKTMLA-KAVAS 271 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La-~aiA~ 271 (473)
..+|+.||||||||+++ +.++.
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ 47 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAY 47 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHH
Confidence 45999999999999754 44444
No 151
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.53 E-value=0.019 Score=48.19 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=19.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
.|.|.|+||+|||+|++++..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999999975
No 152
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=93.53 E-value=0.016 Score=52.57 Aligned_cols=27 Identities=22% Similarity=0.422 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+...+-|.||+|||||||++.++..+.
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcccC
Confidence 345689999999999999999987653
No 153
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.52 E-value=0.019 Score=49.69 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=25.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
|.|.|+.|+||||+++.|++.+ |.+++.+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~ 36 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEec
Confidence 6788999999999999999876 556665543
No 154
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.52 E-value=0.018 Score=48.40 Aligned_cols=20 Identities=35% Similarity=0.642 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|++|+|||+|++.+..
T Consensus 8 i~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999986
No 155
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.52 E-value=0.021 Score=51.22 Aligned_cols=26 Identities=35% Similarity=0.553 Sum_probs=22.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
..-+-|.||.|||||||.+.++....
T Consensus 32 Ge~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 32 GEFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHHcCCC
Confidence 34578999999999999999998664
No 156
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.50 E-value=0.018 Score=49.06 Aligned_cols=20 Identities=35% Similarity=0.489 Sum_probs=18.6
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|+||+|||+|++.+.+
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 88999999999999999875
No 157
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=93.48 E-value=0.014 Score=52.53 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=21.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.-+-|.||+|||||||++.|+.-.
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 457899999999999999998754
No 158
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=93.43 E-value=0.025 Score=50.31 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=22.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
+..+|.|++|+|||+|+.++........-.+
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~v 126 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEV 126 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC----
T ss_pred CeEEEECCCCCCHHHHHHhhcchhhhhccCc
Confidence 5689999999999999999987655443333
No 159
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.40 E-value=0.021 Score=48.23 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=19.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-+++.|+||+|||+|++.+..
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 389999999999999999876
No 160
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.40 E-value=0.021 Score=47.93 Aligned_cols=21 Identities=33% Similarity=0.588 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|++|+|||+|++.+...
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999999863
No 161
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=93.39 E-value=0.014 Score=52.09 Aligned_cols=25 Identities=28% Similarity=0.558 Sum_probs=21.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
--+-|.||.|||||||++.++.-..
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHhcCcC
Confidence 4588999999999999999998653
No 162
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.34 E-value=0.018 Score=53.15 Aligned_cols=28 Identities=29% Similarity=0.380 Sum_probs=23.7
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
.+..-+-|.||.|+|||||+++|+..+.
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred cCCCEEEEECCCCChHHHHHHHHhCCCc
Confidence 3445688999999999999999998763
No 163
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.34 E-value=0.032 Score=48.98 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=27.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEec
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSA 282 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~ 282 (473)
+-|.|.|+-||||||+++.|++.+......+..
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhCCEEEEE
Confidence 447789999999999999999999776665543
No 164
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.33 E-value=0.018 Score=48.68 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
.|+|.|+||+|||+|..+|.++
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999753
No 165
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=93.22 E-value=0.021 Score=51.50 Aligned_cols=27 Identities=22% Similarity=0.407 Sum_probs=22.9
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.+..-+-|.||.|+|||||++.++..+
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 344568899999999999999998765
No 166
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.16 E-value=0.022 Score=47.82 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=19.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|+|.|.||+|||+|++.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 389999999999999999876
No 167
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.14 E-value=0.024 Score=47.62 Aligned_cols=20 Identities=30% Similarity=0.571 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|+||+|||+|++.+..
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 88999999999999999875
No 168
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.12 E-value=0.025 Score=47.45 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=19.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|++.|.+|+|||+|++.+...
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999999863
No 169
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.09 E-value=0.023 Score=47.38 Aligned_cols=21 Identities=33% Similarity=0.580 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|++.|+||+|||+|++.+...
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999998764
No 170
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.09 E-value=0.023 Score=51.49 Aligned_cols=28 Identities=36% Similarity=0.549 Sum_probs=23.6
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
.+..-+-|.||.|||||||++.|+..+.
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcccC
Confidence 3345689999999999999999998664
No 171
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=93.07 E-value=0.022 Score=51.25 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=23.3
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+...+-|.||+|+|||||++.++..+.
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 345689999999999999999998764
No 172
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.07 E-value=0.025 Score=47.24 Aligned_cols=20 Identities=30% Similarity=0.365 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.+|+|||+|++.+..
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999876
No 173
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=93.03 E-value=0.021 Score=48.00 Aligned_cols=22 Identities=45% Similarity=0.567 Sum_probs=19.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~ 271 (473)
.-|+|.|+||+|||+|++.+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4599999999999999998854
No 174
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.94 E-value=0.026 Score=47.93 Aligned_cols=20 Identities=30% Similarity=0.581 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.||||||+|+..+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999886
No 175
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=92.93 E-value=0.032 Score=52.56 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=27.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---C--CcEEEEecCc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---Q--ATFFNVSASS 284 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~--~~~~~v~~~~ 284 (473)
...|=+.||||+|||||+.+++..+ | .-++.++++.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss 94 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCce
Confidence 3457899999999999999998765 2 3456666554
No 176
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=92.93 E-value=0.072 Score=48.94 Aligned_cols=24 Identities=38% Similarity=0.584 Sum_probs=21.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.-++|.||+|||||+|+..+++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CeeeEeCCCCCCHHHHHHHHHHHH
Confidence 459999999999999999998754
No 177
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.90 E-value=0.026 Score=47.27 Aligned_cols=20 Identities=30% Similarity=0.512 Sum_probs=18.5
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.+|+|||+|++.+..
T Consensus 5 i~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999998875
No 178
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.90 E-value=0.028 Score=46.71 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.+|+|||+|++.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999986
No 179
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=92.83 E-value=0.019 Score=51.70 Aligned_cols=25 Identities=28% Similarity=0.557 Sum_probs=21.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..-+-|.||+|||||||++.|+.-.
T Consensus 31 Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 31 GERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3468899999999999999999854
No 180
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.76 E-value=0.027 Score=46.94 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|++|+|||+|++.+...
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998763
No 181
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.71 E-value=0.03 Score=47.26 Aligned_cols=21 Identities=29% Similarity=0.502 Sum_probs=19.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|+|.|.+|+|||+|++.+..
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 389999999999999999876
No 182
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.70 E-value=0.031 Score=46.83 Aligned_cols=20 Identities=35% Similarity=0.526 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|++|+|||+|++.+..
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999876
No 183
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=92.70 E-value=0.027 Score=46.46 Aligned_cols=22 Identities=32% Similarity=0.566 Sum_probs=19.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|+||+|||+|.+++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4889999999999999999753
No 184
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.67 E-value=0.028 Score=47.29 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=19.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4999999999999999998763
No 185
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.64 E-value=0.04 Score=53.41 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=28.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH---cCCcEEEEecC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE---SQATFFNVSAS 283 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e---~~~~~~~v~~~ 283 (473)
.+|+++.|++|+|||++++.+... .+..++.+++.
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 478999999999999998776544 36777777754
No 186
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.63 E-value=0.018 Score=50.98 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEE
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFF 278 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~ 278 (473)
+-|.|-||-|+||||+++.|++.+....+
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~~~~ 31 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCEDWEV 31 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTTEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 45889999999999999999998865444
No 187
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=92.63 E-value=0.038 Score=51.86 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=26.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc-----CCcEEEEecCc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES-----QATFFNVSASS 284 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~-----~~~~~~v~~~~ 284 (473)
.-|=+.||||+|||||..+++..+ ..-++.++++.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccccc
Confidence 457799999999999999998764 34456666544
No 188
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.61 E-value=0.031 Score=46.94 Aligned_cols=22 Identities=27% Similarity=0.501 Sum_probs=19.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|+||+|||+|+..+...
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3899999999999999988763
No 189
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.59 E-value=0.03 Score=47.06 Aligned_cols=20 Identities=30% Similarity=0.584 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.||+|||+|++.+..
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999875
No 190
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.53 E-value=0.027 Score=51.93 Aligned_cols=35 Identities=9% Similarity=0.188 Sum_probs=24.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCcc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASES---QATFFNVSASSL 285 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~l 285 (473)
-|-+.|++|+||||+++++++.+ +.....++..++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 47799999999999999998876 456555655554
No 191
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=92.45 E-value=0.13 Score=45.36 Aligned_cols=23 Identities=26% Similarity=0.342 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
+.++|+||...|||++.|.++--
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHH
T ss_pred cEEEEECCCccccchhhhhhHHH
Confidence 35899999999999999998753
No 192
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=92.44 E-value=0.031 Score=50.74 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=21.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..-+-|.||.|||||||+++|+.-.
T Consensus 28 GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 28 GDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3457899999999999999998754
No 193
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.43 E-value=0.032 Score=46.26 Aligned_cols=20 Identities=30% Similarity=0.418 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.+|+|||+|++.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999976
No 194
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.39 E-value=0.029 Score=46.94 Aligned_cols=21 Identities=43% Similarity=0.773 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|++|+|||+|++.+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999998653
No 195
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.35 E-value=0.036 Score=46.22 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=19.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|+|.|.+|+|||+|++.+..
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 388999999999999999986
No 196
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.28 E-value=0.034 Score=46.85 Aligned_cols=22 Identities=27% Similarity=0.372 Sum_probs=19.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|++|+|||+|+..+...
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3889999999999999998864
No 197
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=92.22 E-value=0.031 Score=47.85 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=19.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
.|.|.|+||+|||||.++|.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 599999999999999999975
No 198
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=92.05 E-value=0.079 Score=48.12 Aligned_cols=37 Identities=27% Similarity=0.229 Sum_probs=29.9
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
.+|+-+++.|.-|+||||++-++|..+ |..+..+++.
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 447789999999999999988888765 6777777654
No 199
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.98 E-value=0.038 Score=47.41 Aligned_cols=21 Identities=38% Similarity=0.610 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|++|+|||+|++.+...
T Consensus 9 ivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhhC
Confidence 889999999999999998763
No 200
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.96 E-value=0.043 Score=45.81 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=19.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999988763
No 201
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.89 E-value=0.041 Score=46.22 Aligned_cols=20 Identities=40% Similarity=0.649 Sum_probs=18.6
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.+|+|||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999875
No 202
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=91.79 E-value=0.03 Score=50.77 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.-.|+|.|.||+|||+|+.+|..+
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Confidence 457999999999999999999864
No 203
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.77 E-value=0.046 Score=45.75 Aligned_cols=22 Identities=27% Similarity=0.416 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4889999999999999999863
No 204
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=91.68 E-value=0.026 Score=51.18 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=22.9
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+..-+.|.||+|+|||||++.++..+.
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~~ 69 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFYD 69 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHhcCC
Confidence 345689999999999999999987654
No 205
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=91.66 E-value=0.045 Score=46.09 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=19.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|.|.|.||+|||+|++++...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999864
No 206
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.64 E-value=0.048 Score=46.18 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=19.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|.+|+|||+|++.+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999998764
No 207
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.58 E-value=0.028 Score=47.30 Aligned_cols=20 Identities=40% Similarity=0.554 Sum_probs=8.5
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|+|.|.||||||+|++++..
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999998875
No 208
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.58 E-value=0.04 Score=49.74 Aligned_cols=21 Identities=33% Similarity=0.533 Sum_probs=18.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
-+|+||.|+|||++..||+-.
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 389999999999999999753
No 209
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.36 E-value=0.049 Score=46.08 Aligned_cols=21 Identities=29% Similarity=0.484 Sum_probs=19.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|.+|+|||+|++.+...
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998773
No 210
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.20 E-value=0.026 Score=47.38 Aligned_cols=20 Identities=40% Similarity=0.600 Sum_probs=17.7
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|++.|++|+|||+|++.+..
T Consensus 6 i~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC-
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999998765
No 211
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.19 E-value=0.052 Score=46.13 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=19.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|.+|+|||+|++.+...
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 889999999999999998763
No 212
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=91.17 E-value=0.044 Score=49.17 Aligned_cols=25 Identities=32% Similarity=0.403 Sum_probs=21.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
.-+-|.||.|+|||||.++|+....
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCCC
Confidence 4577999999999999999998663
No 213
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.01 E-value=0.056 Score=46.15 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|+|.|++|+|||+|+..+...
T Consensus 6 vvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999988763
No 214
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.94 E-value=0.02 Score=47.22 Aligned_cols=21 Identities=29% Similarity=0.605 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e 272 (473)
|.|.|.||+|||+|+.++..+
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999865
No 215
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.76 E-value=0.058 Score=45.09 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=19.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
.|.|.|.||+|||+|.+++.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999975
No 216
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=90.69 E-value=0.063 Score=48.01 Aligned_cols=26 Identities=27% Similarity=0.415 Sum_probs=22.1
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
..-+-|.||.|+|||||.++|+....
T Consensus 28 Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 28 GEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 34566999999999999999998764
No 217
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=90.38 E-value=0.052 Score=45.88 Aligned_cols=21 Identities=38% Similarity=0.487 Sum_probs=18.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|-|.|+||+|||+|.+++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999854
No 218
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.25 E-value=0.059 Score=48.70 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=26.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCc--EEEEecCcc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQAT--FFNVSASSL 285 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~--~~~v~~~~l 285 (473)
.-+-|.||.|+|||||+++|+...... -+.++..++
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i 68 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI 68 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEec
Confidence 457899999999999999999876432 234444444
No 219
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=90.16 E-value=0.038 Score=46.32 Aligned_cols=23 Identities=13% Similarity=0.234 Sum_probs=20.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~ 271 (473)
...|.|.|+|++|||+|.+++..
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 34699999999999999999854
No 220
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.08 E-value=0.077 Score=44.69 Aligned_cols=23 Identities=26% Similarity=0.452 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
--|.|.|.+|+|||+|+.++...
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
Confidence 35889999999999999999753
No 221
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=89.91 E-value=0.059 Score=47.95 Aligned_cols=24 Identities=38% Similarity=0.516 Sum_probs=20.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
..-+-|.||.|+|||||.++++..
T Consensus 25 Gei~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 25 GEILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp TCEEECBCCTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCcHHHHHHHHhCC
Confidence 345789999999999999999873
No 222
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=89.78 E-value=0.058 Score=45.41 Aligned_cols=20 Identities=35% Similarity=0.491 Sum_probs=18.4
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~ 271 (473)
|.|.|.||+|||+|++++.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999964
No 223
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.73 E-value=0.084 Score=48.34 Aligned_cols=22 Identities=32% Similarity=0.437 Sum_probs=19.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~ 271 (473)
.-.+|+||.|+|||++..||+-
T Consensus 24 ~~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 3468999999999999999964
No 224
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=89.56 E-value=0.025 Score=47.93 Aligned_cols=23 Identities=26% Similarity=0.234 Sum_probs=20.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHc
Q 012000 251 GLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
-.+|+||.|+|||++..||.--+
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 35789999999999999998765
No 225
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.37 E-value=0.088 Score=44.70 Aligned_cols=19 Identities=32% Similarity=0.583 Sum_probs=17.8
Q ss_pred eEEEEcCCCCcHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAV 269 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~ai 269 (473)
-|+|.|.+|+|||+|++.+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3899999999999999998
No 226
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=89.20 E-value=0.078 Score=49.02 Aligned_cols=24 Identities=21% Similarity=0.253 Sum_probs=20.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
--+|+||.|||||++..||+--++
T Consensus 28 lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHC
Confidence 348999999999999999987654
No 227
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.10 E-value=0.068 Score=46.38 Aligned_cols=50 Identities=24% Similarity=0.242 Sum_probs=32.1
Q ss_pred CcccccChHHHHHHHHHHHh-chhcc-----hhhhhcCCCCCceEEEEcCCCCcHHHHHHHH
Q 012000 214 KWEDVAGLEKAKQALMEMVI-LPAKR-----RDLFTGLRRPARGLLLFGPPGNGKTMLAKAV 269 (473)
Q Consensus 214 ~~~divGl~~~k~~L~e~v~-~p~~~-----~~~~~~~~~~~~~iLL~GPpGtGKT~La~ai 269 (473)
+|+|+.-.+++.+.|.+.-. .|..- |.+.. .+.+++.+|+|+|||+ |-.+
T Consensus 2 sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~-----g~dvi~~a~tGsGKTl-ay~l 57 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIT-----GRDILARAKNGTGKTA-AFVI 57 (206)
T ss_dssp CGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHH-----TCCEEEECCTTSCHHH-HHHH
T ss_pred ChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHc-----CCCEEEecCCcchhhh-hhcc
Confidence 68888888888888877521 11110 11212 3579999999999995 4433
No 228
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=88.64 E-value=0.035 Score=49.42 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=20.3
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATF 277 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~ 277 (473)
.+..+|.|++|+|||+|+.++..+.....
T Consensus 97 ~~~~vl~G~SGVGKSSLiN~L~~~~~~~t 125 (231)
T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPELGLRT 125 (231)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC------
T ss_pred cceEEEECCCCccHHHHHHhhccHhHhhh
Confidence 45678899999999999999986654433
No 229
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.50 E-value=0.13 Score=43.34 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=20.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
--|++.|++|+|||+|+..+...
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 45899999999999999988774
No 230
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=88.30 E-value=0.17 Score=43.04 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=26.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHH----HcCCcEEEEecC-ccchhhhh
Q 012000 250 RGLLLFGPPGNGKTMLAKAVAS----ESQATFFNVSAS-SLTSKWVG 291 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~----e~~~~~~~v~~~-~l~~~~~g 291 (473)
+..|+++|.|+|||.++-.++. ..+..++.+.+. .+...+..
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P~~~L~~q~~~ 70 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAE 70 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECSSHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcCchHHHHHHHH
Confidence 3588999999999987665554 235556655543 44444333
No 231
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.09 E-value=0.22 Score=42.51 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=26.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 250 RGLLLFGP-PGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 250 ~~iLL~GP-pGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
+-++++|- +|+|||+++-.+|..+ |..+..+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 46889998 5999999998888765 777777764
No 232
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=87.57 E-value=0.13 Score=44.92 Aligned_cols=22 Identities=32% Similarity=0.477 Sum_probs=19.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|||.|++|+|||+|++.+...
T Consensus 8 KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 5999999999999999998643
No 233
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=86.85 E-value=0.13 Score=48.16 Aligned_cols=24 Identities=29% Similarity=0.376 Sum_probs=21.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
-|.|-|+-|+||||+++.+++.++
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEECCccCCHHHHHHHHHHHhc
Confidence 478889999999999999999874
No 234
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=86.81 E-value=0.49 Score=41.75 Aligned_cols=38 Identities=26% Similarity=0.220 Sum_probs=28.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecCccc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSASSLT 286 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~~l~ 286 (473)
+...||+|..|+|||.++-..+... |..++.+-+....
T Consensus 76 ~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~L 116 (233)
T d2eyqa3 76 AMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLL 116 (233)
T ss_dssp CCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHHH
T ss_pred ccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHHh
Confidence 4578999999999999887766543 6677766665443
No 235
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=86.75 E-value=0.3 Score=43.78 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
+-|+++|.-|+||||++-.+|..+ |..++.+++.
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 457788999999999877776544 6777777654
No 236
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.57 E-value=0.17 Score=42.52 Aligned_cols=22 Identities=32% Similarity=0.448 Sum_probs=19.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|+|.|..|+|||+|++.+...
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999764
No 237
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.43 E-value=0.15 Score=44.84 Aligned_cols=24 Identities=38% Similarity=0.423 Sum_probs=21.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
.-.+|.|..|+|||||.+.+.+..
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CEEEEeeCCCCCHHHHHHHHHhcC
Confidence 357899999999999999998864
No 238
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.55 E-value=0.15 Score=46.51 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=20.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
--+|+||.|+|||++..||+--++
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTSC
T ss_pred eEEEECCCCCcHHHHHHHHHHHhC
Confidence 358999999999999999977654
No 239
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=85.33 E-value=0.39 Score=42.06 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=28.6
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC-ccchhhhhhh
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS-SLTSKWVGEG 293 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~-~l~~~~~g~~ 293 (473)
.+.+++.+|+|+|||+.+-..+-.. +...+.+.+. .+...+....
T Consensus 58 g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~Pt~~La~Q~~~~l 106 (237)
T d1gkub1 58 KESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETI 106 (237)
T ss_dssp TCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEeccHHHHHHHHHHH
Confidence 3579999999999998765554332 4556655554 4554444433
No 240
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.25 E-value=0.55 Score=34.66 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHhhhC----------------------CChHHHHHHHHHHHH
Q 012000 52 GYFELAKEEIAKAVRAEEW----------------------GLVDDAIIHYKNAQR 85 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D~~----------------------g~~~~Al~~Y~~~i~ 85 (473)
+-|+.|+..+++|++.+.. |+|++|+.+|+++++
T Consensus 19 g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~ 74 (95)
T d1tjca_ 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (95)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHH
Confidence 3478899999999887542 566667666666654
No 241
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=84.95 E-value=0.37 Score=42.98 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=26.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc---CCcEEEEecC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES---QATFFNVSAS 283 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~---~~~~~~v~~~ 283 (473)
+.|-++|--|+||||+|-.+|..+ |.++..+++.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 357789999999999998887755 6777777653
No 242
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.86 E-value=0.17 Score=47.13 Aligned_cols=52 Identities=12% Similarity=0.224 Sum_probs=34.6
Q ss_pred CCCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHH
Q 012000 212 SVKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 212 ~~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~ 267 (473)
..+||.|.+.+.--+.+-+.+..|+... ++.+ ....|+-||+.|+|||+..-
T Consensus 43 ~f~FD~vf~~~~~q~~vf~~~~~~lv~~-~l~G---~n~~i~aYGqtgSGKTyT~~ 94 (323)
T d1bg2a_ 43 PYAFDRVFQSSTSQEQVYNDCAKKIVKD-VLEG---YNGTIFAYGQTSSGKTHTME 94 (323)
T ss_dssp EEECSEEECTTCCHHHHHHHHTHHHHHH-HHTT---CCEEEEEECSTTSSHHHHHT
T ss_pred eeECCEEECCCCCHHHHHHHHHHHHHHH-HHcC---CCcceeeecccCCCCceecc
Confidence 4568888776665666655555554322 2232 24679999999999999863
No 243
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.61 E-value=0.16 Score=43.98 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=30.1
Q ss_pred CcccccChHHHHHHHHHHHhc-hhcchh-hhhcCCCCCceEEEEcCCCCcHHHH
Q 012000 214 KWEDVAGLEKAKQALMEMVIL-PAKRRD-LFTGLRRPARGLLLFGPPGNGKTML 265 (473)
Q Consensus 214 ~~~divGl~~~k~~L~e~v~~-p~~~~~-~~~~~~~~~~~iLL~GPpGtGKT~L 265 (473)
+|+|+.-.+++.+.|.+.-.. |..-.. .... ....+.+++..|+|||||+.
T Consensus 2 ~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~-il~g~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQ-AILGMDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHH-HHTTCCEEEECCTTSCHHHH
T ss_pred CccccCcCHHHHHHHHHCCCCCCCHHHHHHHHH-HHcCCCeEEEeccccccccc
Confidence 588887777888877764211 111000 0000 01136899999999999863
No 244
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=84.56 E-value=0.18 Score=47.15 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=33.1
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
..||.|.+.+..-+.+-+.+..|+...-+..+. ...|+-||..|+|||+..
T Consensus 52 F~fD~Vf~~~~~q~~vy~~~~~plv~~~~~~G~---n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 52 FIVDKVFDDTVDNFTVYENTIKPLIIDLYENGC---VCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp EECSEEECTTCCHHHHHHHHTHHHHHHHHHHCC---EEEEEEECCTTSSHHHHH
T ss_pred EeCCeecCCCCCHHHHHHHHHHHHHHHHHhcCC---CeEEEeeeccccccceee
Confidence 457777776666666666555554433222222 356999999999999885
No 245
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=84.49 E-value=0.21 Score=47.04 Aligned_cols=50 Identities=18% Similarity=0.435 Sum_probs=32.3
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
.+||.|.+.+.--+.+-+.+..|+.. .++.+ ....|+-||+.|+|||+..
T Consensus 48 f~FD~vf~~~~~q~~vy~~~~~plv~-~~l~G---~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 48 FTFDRVFDMSCKQSDIFDFSIKPTVD-DILNG---YNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EECSEEECTTCCHHHHHHHHTHHHHH-HHTTT---CCEEEEEECSTTSSHHHHH
T ss_pred EECCeEcCCCCCHHHHHHHHHHHHHH-Hhhcc---CceeEEecccCCCCcceee
Confidence 57777777655555555555545442 22222 2457999999999999775
No 246
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.20 E-value=0.26 Score=46.67 Aligned_cols=23 Identities=26% Similarity=0.460 Sum_probs=20.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcC
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
-+|+||.|+|||++..||+-.+|
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 48999999999999999976554
No 247
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=84.06 E-value=0.21 Score=46.75 Aligned_cols=24 Identities=29% Similarity=0.270 Sum_probs=21.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
|.|-|+-|+||||+++.+++.+..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 678899999999999999998754
No 248
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.44 E-value=0.3 Score=46.81 Aligned_cols=23 Identities=17% Similarity=0.382 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCcHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~ 271 (473)
+-.|.+.|.||+|||+|..++..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 45799999999999999999974
No 249
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=83.02 E-value=0.31 Score=40.70 Aligned_cols=21 Identities=33% Similarity=0.545 Sum_probs=18.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-|+|.|..|+|||+|++.+..
T Consensus 4 KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 489999999999999998854
No 250
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.54 E-value=0.3 Score=42.74 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=32.6
Q ss_pred CCCcccccChHHHHHHHHHHHhc-hhcchh-hhhcCCCCCceEEEEcCCCCcHHH
Q 012000 212 SVKWEDVAGLEKAKQALMEMVIL-PAKRRD-LFTGLRRPARGLLLFGPPGNGKTM 264 (473)
Q Consensus 212 ~~~~~divGl~~~k~~L~e~v~~-p~~~~~-~~~~~~~~~~~iLL~GPpGtGKT~ 264 (473)
..+|+++.-.+.+.+.|.+.-.. |..-.. .... ....+.++...|+|||||.
T Consensus 16 ~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~-il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 16 TPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ-IIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHH-HHTTCCEEEECCTTSSHHH
T ss_pred CCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHH-HHCCCCeEEEcCcchhhhh
Confidence 34899998888888888875321 111000 0000 1114689999999999995
No 251
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=82.45 E-value=0.22 Score=46.13 Aligned_cols=18 Identities=39% Similarity=0.643 Sum_probs=15.5
Q ss_pred ceEEEEcCCCCcHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~ 267 (473)
...||+|.+|||||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 457999999999999864
No 252
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.74 E-value=0.18 Score=43.56 Aligned_cols=51 Identities=20% Similarity=0.200 Sum_probs=30.4
Q ss_pred CCcccccChHHHHHHHHHHHh-chhcchh-hhhcCCCCCceEEEEcCCCCcHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVI-LPAKRRD-LFTGLRRPARGLLLFGPPGNGKTM 264 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~-~p~~~~~-~~~~~~~~~~~iLL~GPpGtGKT~ 264 (473)
.+|+|+.-.+++.+.|.+.-. .|..-.. .... .-..+.+++..|+|||||+
T Consensus 3 ~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~-il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPI-ALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHH-HHTTCCEEEECCSSSTTHH
T ss_pred CChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHH-HHcCCCEEeeccCcccccc
Confidence 478888777777777776521 1111000 0000 0113679999999999995
No 253
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=81.70 E-value=0.27 Score=45.84 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
|.|-|+-|+||||+++.+++.++.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC----
T ss_pred EEEECCcCCCHHHHHHHHHHHhCC
Confidence 678899999999999999987754
No 254
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=81.23 E-value=0.69 Score=41.53 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=26.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH---cCCcEEEEecCcc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE---SQATFFNVSASSL 285 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e---~~~~~~~v~~~~l 285 (473)
+...||+|..|||||.++-..+.. .|.....+-+...
T Consensus 104 ~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~ 143 (264)
T d1gm5a3 104 PMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSI 143 (264)
T ss_dssp CCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHH
T ss_pred cceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHh
Confidence 457899999999999988776543 3666666555544
No 255
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=80.97 E-value=0.3 Score=44.94 Aligned_cols=18 Identities=39% Similarity=0.643 Sum_probs=15.3
Q ss_pred ceEEEEcCCCCcHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~ 267 (473)
..-||+|.+|||||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 346899999999999873
No 256
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=80.93 E-value=0.4 Score=43.42 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=20.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.-++|+|++|+|||+|+..++..
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHH
Confidence 34999999999999999999875
No 257
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=79.88 E-value=0.35 Score=45.29 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=29.7
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
.+||.+.+.+..-+.+-+.+..|+.. .++.+. ...|+-||+.|+|||+..
T Consensus 49 f~FD~vf~~~~~q~~vy~~~~~~lv~-~~l~G~---n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 49 YTFDMVFGASTKQIDVYRSVVCPILD-EVIMGY---NCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EECSEEECTTCCHHHHHHHHHHHHHH-HHHTTC---EEEEEEEECTTSSHHHHH
T ss_pred EecCEEeCCCCCHHHHHHHHHHHhHH-HHhccC---CceEEeeeeccccceEEe
Confidence 35666666544444444444444332 222222 457999999999999765
No 258
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.30 E-value=1.2 Score=38.29 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=32.9
Q ss_pred CCCcccccChHHHHHHHHHHHhc---hhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 212 SVKWEDVAGLEKAKQALMEMVIL---PAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 212 ~~~~~divGl~~~k~~L~e~v~~---p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
-.+|+|+.-.+++.+.|.+.-.. |.....+ .. ....+.+++.+|+|||||+..
T Consensus 9 ~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~ai-p~-il~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 9 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAI-MP-IIEGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHH-HH-HHTTCCEEEECCTTSSHHHHH
T ss_pred ccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHH-HH-HHcCCCEEeecccccchhhhh
Confidence 36899997788888888764321 1111110 00 011357999999999999743
No 259
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=79.16 E-value=0.31 Score=46.01 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=33.0
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
.+||.+.+.+..-+.+-+.+..|+.. ..+.+. ...|+-||..|+|||+..
T Consensus 82 f~FD~vf~~~~~Q~~Vy~~~~~plv~-~~l~G~---n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 82 FCFDFAFDETASNEVVYRFTARPLVQ-TIFEGG---KATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EECSEEECTTCCHHHHHHHTTHHHHH-HHHTTC---EEEEEEEESTTSSHHHHH
T ss_pred EeCCeecCCCCCHHHHHHHHHHHHHH-HHHhcc---CceEEeeccCCCCCceee
Confidence 46777877665555555555555443 233332 457899999999999876
No 260
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=78.70 E-value=0.54 Score=39.15 Aligned_cols=22 Identities=36% Similarity=0.516 Sum_probs=19.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
.|-|.|.|++|||||..++...
T Consensus 7 nIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEEeCCCCcHHHHHHHHHHh
Confidence 4789999999999999999753
No 261
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=78.61 E-value=0.5 Score=44.13 Aligned_cols=49 Identities=16% Similarity=0.310 Sum_probs=29.1
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
.+||.+.+.+..-+.+-+.+. |+. ..++.+ ....|+-||..|+|||+..
T Consensus 52 f~FD~vf~~~~~q~~vy~~v~-~~v-~~~l~G---~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 52 FKFDKIFDQQDTNVDVFKEVG-QLV-QSSLDG---YNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEESEEECTTCCHHHHHHHHH-HHH-GGGGGT---CCEEEEEECCTTSSHHHHH
T ss_pred eecCeEeCCCCCHHHHHHHhh-hhh-cchhcc---cccceeeeeccCCcccccc
Confidence 467777764443334444332 322 223332 2457889999999999865
No 262
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=78.44 E-value=0.84 Score=41.01 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=24.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH---cCCcEEEEecC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE---SQATFFNVSAS 283 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e---~~~~~~~v~~~ 283 (473)
-|.++|--|+||||++-.+|.. .|..+..+++.
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 4667999999999976666553 37777777653
No 263
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=78.32 E-value=0.36 Score=45.59 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=28.7
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
.+||.|.+.+..-+.+-+.+ .|+. ...+.+ ....|+-||+.|+|||+..
T Consensus 44 f~FD~vf~~~~~q~~vy~~v-~~lv-~~~l~G---~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 44 HMYDRVFDGNATQDDVFEDT-KYLV-QSAVDG---YNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EECSEEECTTCCHHHHHHTT-THHH-HHHHTT---CEEEEEEECSTTSSHHHHH
T ss_pred EECCeecCCCCCHHHHHHHH-HHHH-HHHhcC---CceeeeccccCCCCccccc
Confidence 35666665444334444433 2332 223332 2457999999999999974
No 264
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=78.26 E-value=0.41 Score=44.20 Aligned_cols=18 Identities=39% Similarity=0.632 Sum_probs=15.4
Q ss_pred ceEEEEcCCCCcHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAK 267 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~ 267 (473)
...||+|-+|||||||..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 347899999999999983
No 265
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=77.99 E-value=1.9 Score=41.03 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=42.9
Q ss_pred cccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCc
Q 012000 215 WEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASS 284 (473)
Q Consensus 215 ~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~ 284 (473)
|.--+-+..+++.|.+-+.. ..+..+|.|-+|+|||+++.+++...+.+++.|....
T Consensus 10 ~~p~gDQP~aI~~l~~~l~~-------------g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 10 YEPQGDQPQAIAKLVDGLRR-------------GVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp SCCCTTHHHHHHHHHHHHHH-------------TCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred CCCCCCCHHHHHHHHHHHhc-------------CCCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 33444566667777666631 1356899999999999999999999999998887653
No 266
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=77.85 E-value=0.68 Score=41.63 Aligned_cols=25 Identities=36% Similarity=0.559 Sum_probs=21.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
++|-+.|..|+|||||+.++....+
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 5788999999999999999976553
No 267
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=77.82 E-value=0.71 Score=39.34 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=27.8
Q ss_pred CcccccChHHHHHHHHHHHhchhcchhhhhcC----CCCCceEEEEcCCCCcHHHH
Q 012000 214 KWEDVAGLEKAKQALMEMVILPAKRRDLFTGL----RRPARGLLLFGPPGNGKTML 265 (473)
Q Consensus 214 ~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~----~~~~~~iLL~GPpGtGKT~L 265 (473)
+|+|+.-.+.+.+.|.+.-. ..|.-.+.. ....+.+++..|+|||||+.
T Consensus 2 ~F~~l~L~~~l~~~l~~~g~---~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKTLRF---YKPTEIQERIIPGALRGESMVGQSQTGTGKTHA 54 (209)
T ss_dssp CGGGSCCCHHHHHHHHHTTC---CSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHH
T ss_pred ccccCCcCHHHHHHHHHCCC---CCCCHHHHHHHHHHHCCCCeEeeccccccccee
Confidence 46777666666666665321 111101100 00135799999999999973
No 268
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=77.47 E-value=0.59 Score=40.14 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=34.8
Q ss_pred CCcccccChHHHHHHHHHHHh-chhcch-hhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVI-LPAKRR-DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~-~p~~~~-~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.+|+|+.-.+++.+.|.+.-. .|..-. ..+.........+++..|+|+|||+.+-..+-+
T Consensus 4 msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~ 65 (208)
T d1hv8a1 4 MNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 65 (208)
T ss_dssp CCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHH
T ss_pred cCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccccc
Confidence 378898777778888766421 111100 111111111247999999999999876554433
No 269
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.18 E-value=1.5 Score=37.82 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=32.1
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcC----CCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGL----RRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~----~~~~~~iLL~GPpGtGKT~La 266 (473)
-+|+|+.-.+.+.+.|.+.-. ..|.-.+.. ....+.+++..|+|||||...
T Consensus 12 ~sF~~l~L~~~l~~~L~~~g~---~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 12 DSFDDMNLSESLLRGIYAYGF---EKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCGGGSCCCHHHHHHHHHHTC---CSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHCCC---CCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhh
Confidence 379998878888888865432 111111100 011367999999999999744
No 270
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=76.85 E-value=0.73 Score=41.67 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
++|-|.|..|+|||+|+.++....+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 6899999999999999999977654
No 271
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=76.66 E-value=0.87 Score=40.80 Aligned_cols=18 Identities=39% Similarity=0.429 Sum_probs=15.3
Q ss_pred CCCceEEEEcCCCCcHHH
Q 012000 247 RPARGLLLFGPPGNGKTM 264 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~ 264 (473)
...+.+|+.+|+|+|||+
T Consensus 7 ~~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 7 RKKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp STTCEEEECCCTTSSTTT
T ss_pred hcCCcEEEEECCCCCHHH
Confidence 345789999999999995
No 272
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=76.39 E-value=1.3 Score=37.88 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=23.7
Q ss_pred EEEE-cCCCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 252 LLLF-GPPGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 252 iLL~-GPpGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
|.++ |-.|+||||+|..+|..+ |.++..+++
T Consensus 4 Iav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~ 38 (232)
T d1hyqa_ 4 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDA 38 (232)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 4444 889999999999887765 667777765
No 273
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.09 E-value=1.5 Score=33.97 Aligned_cols=38 Identities=18% Similarity=0.085 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhC---------------CChHHHHHHHHHHHHH
Q 012000 49 KLKGYFELAKEEIAKAVRAEEW---------------GLVDDAIIHYKNAQRI 86 (473)
Q Consensus 49 ~~k~~~~~A~~~i~~Av~~D~~---------------g~~~~Al~~Y~~~i~~ 86 (473)
....-|++|++++++|++.+.. |+|++|+..|.++|++
T Consensus 15 ~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l 67 (128)
T d1elra_ 15 YKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (128)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHh
Confidence 3445568888888888877642 5666666666666644
No 274
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=76.02 E-value=0.65 Score=46.31 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=16.5
Q ss_pred ceEEEEcCCCCcHHHHHH-HHHH
Q 012000 250 RGLLLFGPPGNGKTMLAK-AVAS 271 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~-aiA~ 271 (473)
.++|+.|.||||||+.+- .++.
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~ 47 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAY 47 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeCchHHHHHHHHHHHH
Confidence 358888999999988663 3443
No 275
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.76 E-value=0.92 Score=35.53 Aligned_cols=24 Identities=17% Similarity=0.045 Sum_probs=20.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
-.|+|.|-+|+||+++|+|+...+
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~~l 30 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLSTF 30 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHH
Confidence 358999999999999999997654
No 276
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=74.97 E-value=1.6 Score=34.98 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTE 89 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~ 89 (473)
++.|..+-.++..+=..|+|++|+.+|++|++++..
T Consensus 14 ~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~ 49 (153)
T d2fbna1 14 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH 49 (153)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 345555555555666679999999999999987643
No 277
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=74.65 E-value=3.4 Score=32.64 Aligned_cols=46 Identities=13% Similarity=0.076 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHhhhC-------------------CChHHHHHHHHHHHHHHHHHcCCCCC
Q 012000 51 KGYFELAKEEIAKAVRAEEW-------------------GLVDDAIIHYKNAQRILTEASSTPVP 96 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~~-------------------g~~~~Al~~Y~~~i~~l~~~~~~~~~ 96 (473)
+..+++|++.+++|+++|-. ++..++...|.+|++.|.+++...++
T Consensus 54 ~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~ 118 (145)
T d1zu2a1 54 KQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 118 (145)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCC
Confidence 46678999999999999752 34456667788888888888876544
No 278
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=74.07 E-value=2.9 Score=39.73 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=30.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCc
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASS 284 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~ 284 (473)
+.++|.|.+|+||++++.+++...+.+++.|....
T Consensus 29 ~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~ 63 (408)
T d1c4oa1 29 RFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNK 63 (408)
T ss_dssp SEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSH
T ss_pred CcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 45899999999999999999999999988886553
No 279
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=73.46 E-value=1.5 Score=39.53 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=36.6
Q ss_pred ccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc----CCcE-EEEecCccchhhhhh
Q 012000 218 VAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES----QATF-FNVSASSLTSKWVGE 292 (473)
Q Consensus 218 ivGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~----~~~~-~~v~~~~l~~~~~g~ 292 (473)
+.-.+-+++.+..++. .+..++.-|.|+|||.++-+++..+ +.+. +.+....|+..|..+
T Consensus 112 ~~~rdyQ~~av~~~l~---------------~~~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp~~~Lv~Q~~~~ 176 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLV---------------NRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADD 176 (282)
T ss_dssp CCCCHHHHHHHHHHHH---------------HSEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHh---------------cCCceeEEEcccCccHHHHHHHHHhhhcccceEEEEEcCchhHHHHHHH
Confidence 3345566666666653 1345677799999999888877543 3334 444444566555544
No 280
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=73.28 E-value=0.48 Score=44.79 Aligned_cols=49 Identities=22% Similarity=0.411 Sum_probs=30.3
Q ss_pred CCcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHH
Q 012000 213 VKWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 213 ~~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La 266 (473)
..||.+.+.+.--+.+-+.+. |+. ..++.+. ...|+-||+.|+|||+..
T Consensus 94 F~FD~vf~~~~~Q~~Vy~~v~-plv-~~vl~G~---n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 94 FSFDQVFHPLSSQSDIFEMVS-PLI-QSALDGY---NICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EECSEEECTTCCHHHHHTTTH-HHH-HHHHTTC---EEEEEEECSTTSSHHHHH
T ss_pred eECCeEECCCCCccchHHHHH-HHH-HHHhccc---ceeEEeeccCCCccceEe
Confidence 467777765544444444432 433 2333322 457999999999999864
No 281
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=72.35 E-value=2 Score=36.66 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=24.7
Q ss_pred eEEEE-cCCCCcHHHHHHHHHHHc---CCcEEEEec
Q 012000 251 GLLLF-GPPGNGKTMLAKAVASES---QATFFNVSA 282 (473)
Q Consensus 251 ~iLL~-GPpGtGKT~La~aiA~e~---~~~~~~v~~ 282 (473)
-|-++ +-.|+||||++..+|..+ |.++..+++
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 35556 678999999999888765 677777775
No 282
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=72.22 E-value=0.94 Score=38.76 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=21.3
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
|.-+|.+.|-+++|||||+.+|...+
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHh
Confidence 33568899999999999999996543
No 283
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=71.80 E-value=1.9 Score=36.22 Aligned_cols=32 Identities=28% Similarity=0.275 Sum_probs=22.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
+.+++.-|+|+|||..+....-......+.+.
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~~~~~~~~~v~ 72 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHSSSEEEEEC
T ss_pred CCEEEEcCCCCCCcchhhhhhhhccCceEEec
Confidence 57999999999999877655544444444443
No 284
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=70.95 E-value=2.1 Score=34.11 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=22.5
Q ss_pred EEEcCCCCcHHH-HHHHH--HHHcCCcEEEEecC
Q 012000 253 LLFGPPGNGKTM-LAKAV--ASESQATFFNVSAS 283 (473)
Q Consensus 253 LL~GPpGtGKT~-La~ai--A~e~~~~~~~v~~~ 283 (473)
+++||-.+|||+ |.+.+ ....+.+++.+++.
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~ 39 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 39 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEc
Confidence 689999999999 66665 33457777766543
No 285
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=70.40 E-value=0.99 Score=40.91 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=19.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.-++|.|++|+|||+|+..++..
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEeecCCCCChHHHHHHHHHh
Confidence 35899999999999998877653
No 286
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=68.84 E-value=1.8 Score=40.22 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=16.1
Q ss_pred CceEEEEcCCCCcHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLA 266 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La 266 (473)
...|+-||..|+|||+..
T Consensus 87 n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 87 NVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CceeeeeccCCCCCceee
Confidence 467999999999999986
No 287
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=68.17 E-value=1.6 Score=37.72 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=19.4
Q ss_pred EEEEcCCCCcHHHHHHHHHHHc
Q 012000 252 LLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~ 273 (473)
|-+.|.|++|||||+.+|....
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 7789999999999999997653
No 288
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.99 E-value=3.2 Score=31.27 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 012000 52 GYFELAKEEIAKAVRAEE 69 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D~ 69 (473)
+-|++|++++++|++.|.
T Consensus 17 g~~~eAi~~~~~al~~~p 34 (117)
T d1elwa_ 17 GNIDDALQCYSEAIKLDP 34 (117)
T ss_dssp TCHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 346777777777777665
No 289
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.59 E-value=3.1 Score=33.05 Aligned_cols=33 Identities=21% Similarity=0.123 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
+++|..+.++|-..=..|+|++|+.+|++++++
T Consensus 7 l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~ 39 (159)
T d1a17a_ 7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIEL 39 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhhhcccc
Confidence 467777777888888889999999999888864
No 290
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=67.05 E-value=4 Score=32.88 Aligned_cols=36 Identities=22% Similarity=0.088 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTE 89 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~ 89 (473)
++.|..+-+++..+=..|+|++|+.+|.+|+.++..
T Consensus 12 ~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~ 47 (168)
T d1kt1a1 12 LEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEM 47 (168)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 345566667777777799999999999999998743
No 291
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=64.81 E-value=3.2 Score=36.84 Aligned_cols=58 Identities=24% Similarity=0.273 Sum_probs=33.6
Q ss_pred CcccccChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHH
Q 012000 214 KWEDVAGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 214 ~~~divGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
+.....|.......+.+.+....... ...+.....-.+++.|-|.+|||+|+.++.+.
T Consensus 78 sa~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 78 NSVNGQGLNQIVPASKEILQEKFDRM-RAKGVKPRAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CTTTCTTGGGHHHHHHHHHHHHHHHH-HHTTCCCCCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred ecccCCCccccchhhhhhhhhhhhhh-hhccCCCCceEEEEEecCccchhhhhhhhhcc
Confidence 33344555555555554443211111 11112233455899999999999999999864
No 292
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.74 E-value=2.8 Score=34.83 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHHH
Q 012000 46 TAYKLKGYFELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 46 ~~~~~k~~~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~~ 86 (473)
.++...+-|++|++.+++||+.|. .|+|++|+..|.+++.+
T Consensus 44 ~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~ 99 (192)
T d1hh8a_ 44 CMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ 99 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 344445557889999999998875 37778888888877754
No 293
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=63.30 E-value=6.7 Score=30.88 Aligned_cols=42 Identities=12% Similarity=0.129 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHh---------------------------hhCCChHHHHHHHHHHHHHHHHHcCCC
Q 012000 53 YFELAKEEIAKAVRA---------------------------EEWGLVDDAIIHYKNAQRILTEASSTP 94 (473)
Q Consensus 53 ~~~~A~~~i~~Av~~---------------------------D~~g~~~~Al~~Y~~~i~~l~~~~~~~ 94 (473)
-|+.|++.+++|++. ..-|+|++|+..|.+++.++.......
T Consensus 24 ~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~ 92 (156)
T d2hr2a1 24 EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELN 92 (156)
T ss_dssp CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccccccccc
Confidence 377788888888764 345789999999999999888776543
No 294
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=62.89 E-value=4.2 Score=34.76 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=34.2
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc-----CCcEEEEecCccchhhhhhhh
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES-----QATFFNVSASSLTSKWVGEGE 294 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~-----~~~~~~v~~~~l~~~~~g~~~ 294 (473)
..|.||.=++|+|||..+-+++..+ ..+++.|-+..+...|..+..
T Consensus 31 ~~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~~W~~e~~ 81 (230)
T d1z63a1 31 GFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKNWEEELS 81 (230)
T ss_dssp TCCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchhhhhHHHHHHH
Confidence 3578999999999999988887654 245666777777777765543
No 295
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=62.72 E-value=1.4 Score=39.72 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=18.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.-++++|++|+|||+|+..++..
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~ 90 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILN 90 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHT
T ss_pred ceEeeccCCCCChHHHHHHHHhh
Confidence 34888999999999999765443
No 296
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=62.63 E-value=2.7 Score=35.09 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=22.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEE
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNV 280 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v 280 (473)
+|+.|+..+|||.+|..++...+ +.+.+
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~-~~~Yi 29 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAP-QVLYI 29 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCS-SEEEE
T ss_pred EEEECCCCccHHHHHHHHHhcCC-CcEEE
Confidence 68999999999999999986544 34443
No 297
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.35 E-value=3.5 Score=31.06 Aligned_cols=30 Identities=30% Similarity=0.378 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 57 AKEEIAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 57 A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
+-++..+|=.+=+.|+|++|+.+|.++|.+
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~ 32 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKL 32 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 344555666666679999999999999853
No 298
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=61.84 E-value=2.2 Score=43.40 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=22.0
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..+|++.|.+|+|||..++.|-+.+
T Consensus 86 ~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 86 NQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 4689999999999999999887654
No 299
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=61.00 E-value=4.9 Score=31.78 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=23.0
Q ss_pred HHHHHhhhCCChHHHHHHHHHHHHHHHHHc
Q 012000 62 AKAVRAEEWGLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 62 ~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
.+|......|++++|+..|++|++++.+.-
T Consensus 105 ~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 105 SRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 344455667999999999999998876543
No 300
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=60.96 E-value=2.4 Score=43.40 Aligned_cols=25 Identities=36% Similarity=0.424 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..+|++.|.+|+|||..++.+-+.+
T Consensus 125 nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 125 NQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHH
Confidence 5789999999999999988886654
No 301
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.64 E-value=4.9 Score=31.74 Aligned_cols=16 Identities=19% Similarity=0.216 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhhh
Q 012000 54 FELAKEEIAKAVRAEE 69 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~ 69 (473)
|++|++++++|++.+.
T Consensus 26 y~~A~~~~~~al~~~p 41 (159)
T d1a17a_ 26 YENAIKFYSQAIELNP 41 (159)
T ss_dssp HHHHHHHHHHHHHHST
T ss_pred HHHHHHHhhhccccch
Confidence 5667777777777665
No 302
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=59.36 E-value=2.6 Score=43.07 Aligned_cols=25 Identities=32% Similarity=0.351 Sum_probs=21.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
+.+|++.|.+|+|||.-++.|-+.+
T Consensus 91 ~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 91 DQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4689999999999999999887664
No 303
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.03 E-value=19 Score=28.56 Aligned_cols=38 Identities=16% Similarity=0.056 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHH
Q 012000 48 YKLKGYFELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQR 85 (473)
Q Consensus 48 ~~~k~~~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~ 85 (473)
+.-.+-|++|+.++.+|++.|. -|+|++|+..|+++++
T Consensus 72 y~k~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 124 (170)
T d1p5qa1 72 HLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQ 124 (170)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhhhcccccchhhhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3334557999999999999886 2666777777776654
No 304
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.56 E-value=2.3 Score=38.12 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=20.4
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHH
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
|-.-|-+.||.+||||+|+..++..
T Consensus 31 ~v~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 31 PMVVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp BEEEEEEEEBTTSSHHHHHHHHTTC
T ss_pred CEEEEEEECCCCCCHHHHHHHHcCC
Confidence 3345668999999999999998864
No 305
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=58.42 E-value=2.6 Score=43.73 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=20.9
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
+.+|++.|.+|+|||.-++.|-+.+
T Consensus 123 ~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 123 NQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 5689999999999998888776544
No 306
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=58.01 E-value=2.8 Score=42.94 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=21.7
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
+.+|++.|.+|+|||..++.+-+.+
T Consensus 94 ~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 94 NQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 5789999999999999988886654
No 307
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=57.76 E-value=5.1 Score=33.78 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012000 51 KGYFELAKEEIAKAVRAE 68 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D 68 (473)
.+.+++|++.+++|++.+
T Consensus 50 ~g~~~~A~~~~~~al~l~ 67 (259)
T d1xnfa_ 50 LGLRALARNDFSQALAIR 67 (259)
T ss_dssp TTCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhhccC
Confidence 344566777777777665
No 308
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=57.66 E-value=6.7 Score=29.08 Aligned_cols=40 Identities=15% Similarity=-0.035 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhC---------------CChHHHHHHHHHHHH
Q 012000 46 TAYKLKGYFELAKEEIAKAVRAEEW---------------GLVDDAIIHYKNAQR 85 (473)
Q Consensus 46 ~~~~~k~~~~~A~~~i~~Av~~D~~---------------g~~~~Al~~Y~~~i~ 85 (473)
+...-++-+++|+..+++||+.+.. |++++|+.+|+++++
T Consensus 24 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 78 (112)
T d1hxia_ 24 LSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARM 78 (112)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccc
Confidence 3444556688999999999988752 555556555555543
No 309
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.38 E-value=4.2 Score=32.97 Aligned_cols=38 Identities=21% Similarity=0.164 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHH
Q 012000 48 YKLKGYFELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQR 85 (473)
Q Consensus 48 ~~~k~~~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~ 85 (473)
+.-.+-|++|+..+++|++.|- .|+|++|+..|+++++
T Consensus 48 y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~ 100 (201)
T d2c2la1 48 YLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (201)
T ss_dssp HHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3334445666666666666543 2555555555555554
No 310
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.45 E-value=6.9 Score=29.74 Aligned_cols=31 Identities=26% Similarity=0.214 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 56 LAKEEIAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 56 ~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
+|..+-..+...=..|+|++|+.+|.++|++
T Consensus 3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~ 33 (128)
T d1elra_ 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL 33 (128)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4666667777777789999999999999975
No 311
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.25 E-value=7.3 Score=27.98 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHH
Q 012000 58 KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEA 90 (473)
Q Consensus 58 ~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~ 90 (473)
-+++..+..+=+.|+|++|+..|.+|++.+...
T Consensus 6 ddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~ 38 (95)
T d1tjca_ 6 EDSFELGKVAYTEADYYHTELWMEQALRQLDEG 38 (95)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhh
Confidence 356677788888999999999999999877654
No 312
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=55.16 E-value=12 Score=29.67 Aligned_cols=35 Identities=11% Similarity=-0.012 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHc
Q 012000 57 AKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 57 A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
|-.+-.++...=..|+|++|+.+|.+|++++....
T Consensus 27 a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~ 61 (169)
T d1ihga1 27 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSR 61 (169)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhh
Confidence 33444556666678999999999999998876554
No 313
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=55.14 E-value=3.3 Score=42.88 Aligned_cols=25 Identities=32% Similarity=0.329 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASES 273 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~ 273 (473)
..+|++.|.+|+|||..++.+-+.+
T Consensus 121 nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 121 NQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 5689999999999999988876654
No 314
>d2e2aa_ a.7.2.1 (A:) Enzyme IIa from lactose specific PTS, IIa-lac {Lactococcus lactis [TaxId: 1358]}
Probab=54.92 E-value=21 Score=26.53 Aligned_cols=45 Identities=22% Similarity=0.237 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHH
Q 012000 46 TAYKLKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEA 90 (473)
Q Consensus 46 ~~~~~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~ 90 (473)
++=.+-.+--.|+..+-+|+++=+.|+|++|-.+.++|-+.|.++
T Consensus 9 ~~f~iI~~aG~Ars~~~eAl~~ak~gdfe~A~~~l~eA~e~l~~A 53 (104)
T d2e2aa_ 9 LGFEIVAYAGDARSKLLEALKAAENGDFAKADSLVVEAGSCIAEA 53 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 344456667789999999999999999999999999998887766
No 315
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=54.74 E-value=28 Score=23.65 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhhhCCCh--HHHHHHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEEWGLV--DDAIIHYKNAQRILT 88 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~~g~~--~~Al~~Y~~~i~~l~ 88 (473)
|..|+..++.-|+.=+.|+. ++++.+|.+|+.+..
T Consensus 8 fEe~l~~LE~IV~~LE~g~l~Leesl~~ye~G~~L~~ 44 (68)
T d1vp7a_ 8 FETALAELESLVSAMENGTLPLEQSLSAYRRGVELAR 44 (68)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 77888888899988888776 899999999986653
No 316
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=54.18 E-value=3 Score=39.47 Aligned_cols=23 Identities=22% Similarity=0.177 Sum_probs=16.3
Q ss_pred ceEEEEcCCCCcHHHHH-HHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLA-KAVASE 272 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La-~aiA~e 272 (473)
..+|+.+.+|||||+++ ..++.-
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~l 40 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRL 40 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHH
Confidence 34778899999999854 444443
No 317
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=52.10 E-value=4.6 Score=33.84 Aligned_cols=25 Identities=28% Similarity=0.489 Sum_probs=21.4
Q ss_pred CCCceEEEEcCCCCcHHHHHHHHHH
Q 012000 247 RPARGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 247 ~~~~~iLL~GPpGtGKT~La~aiA~ 271 (473)
+|.-+|.+.|-...|||||+.+|..
T Consensus 6 ~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 6 QPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCeEEEEEEccCCcHHHHHHHHHh
Confidence 4445799999999999999999974
No 318
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.03 E-value=11 Score=32.84 Aligned_cols=15 Identities=20% Similarity=0.118 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHhh
Q 012000 54 FELAKEEIAKAVRAE 68 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D 68 (473)
+++|++++++|++.+
T Consensus 222 ~~~A~~~~~~al~~~ 236 (323)
T d1fcha_ 222 SEEAVAAYRRALELQ 236 (323)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHh
Confidence 345555555555443
No 319
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=51.77 E-value=8.9 Score=31.33 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHHHHHHHcCCCCC
Q 012000 54 FELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQRILTEASSTPVP 96 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~~l~~~~~~~~~ 96 (473)
++.|+.+++++++.|- .|++++|+..|.+....|.+-+..++.
T Consensus 83 ~~~Al~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 83 ASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred chHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 5777888888877764 377788888888888888777766543
No 320
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.50 E-value=3.3 Score=38.23 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=22.3
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
-|+|-+.|..|+|||+|+.++....+
T Consensus 17 IRNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 17 VRNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp EEEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred CcEEEEEeCCCCcHHHHHHHHHHHCC
Confidence 36899999999999999999976543
No 321
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=50.74 E-value=3.2 Score=36.03 Aligned_cols=15 Identities=33% Similarity=0.620 Sum_probs=14.0
Q ss_pred ceEEEEcCCCCcHHH
Q 012000 250 RGLLLFGPPGNGKTM 264 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~ 264 (473)
+.+++..|+|||||+
T Consensus 59 ~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 59 RDIMACAQTGSGKTA 73 (238)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CCEEEECCCCCCcce
Confidence 579999999999997
No 322
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.63 E-value=5.4 Score=30.51 Aligned_cols=12 Identities=0% Similarity=-0.116 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHH
Q 012000 55 ELAKEEIAKAVR 66 (473)
Q Consensus 55 ~~A~~~i~~Av~ 66 (473)
++|+++++++++
T Consensus 53 ~~Ai~~l~~~l~ 64 (122)
T d1nzna_ 53 RKGIVLLEELLP 64 (122)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 345555444444
No 323
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=48.80 E-value=14 Score=25.49 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=36.8
Q ss_pred HHHhccCCC-CCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHH
Q 012000 379 KHKLKGQAF-SLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMA 449 (473)
Q Consensus 379 ~~~l~~~~~-~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~ 449 (473)
+.+....|+ .++++....||.-.+ --|+.++++|...... .....||.+|+..||+
T Consensus 13 k~iAeS~Gi~~l~de~a~~LA~Dve----YRl~eiiQeA~KFMrh-----------skR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 13 KVIAESIGVGSLSDDAAKELAEDVS----IKLKRIVQDAAKFMNH-----------AKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHTTCCCBCHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-----------TTCSSBCHHHHHHHHC
T ss_pred HHHHHHcCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-----------hccCcCcHHHHHHHHc
Confidence 334445566 367788888887554 2677777777655321 2336799999999986
No 324
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=48.38 E-value=9.2 Score=33.73 Aligned_cols=22 Identities=14% Similarity=0.302 Sum_probs=20.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|++.|.-++|||+|+.++...
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHTS
T ss_pred eEEEEcCCCCCHHHHHHHHhCC
Confidence 5889999999999999999863
No 325
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=47.97 E-value=5 Score=33.67 Aligned_cols=24 Identities=25% Similarity=0.267 Sum_probs=20.5
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHH
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e 272 (473)
.-+|-+.|=++.|||||+.+|...
T Consensus 3 ~ini~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 3 HVNVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCcHHHHHHHHHHH
Confidence 356889999999999999999753
No 326
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=47.57 E-value=8 Score=30.23 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhC-CChHHHHHHHHHHHHHHHHHc
Q 012000 49 KLKGYFELAKEEIAKAVRAEEW-GLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 49 ~~k~~~~~A~~~i~~Av~~D~~-g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
.....|++|++.+++|++.|.. ..|..++..+.++.++..++.
T Consensus 97 ~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~~ 140 (145)
T d1zu2a1 97 EAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAY 140 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999964 555666667777666665553
No 327
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=46.60 E-value=8.3 Score=30.69 Aligned_cols=19 Identities=11% Similarity=0.101 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 012000 51 KGYFELAKEEIAKAVRAEE 69 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~ 69 (473)
.+-+++|+..+.+|++.|.
T Consensus 90 ~~~~~~Ai~~~~~al~~~p 108 (169)
T d1ihga1 90 MSDWQGAVDSCLEALEIDP 108 (169)
T ss_dssp TTCHHHHHHHHHHHHTTCT
T ss_pred hcccchhhhhhhhhhhhhh
Confidence 3457889999999988775
No 328
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.30 E-value=25 Score=24.16 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=26.3
Q ss_pred cccCCCCcHHHHHHHHHhhCCCCCHHHHHHHH
Q 012000 433 ANQLRPLRYEDFQKAMAVIRPSLNKSKWEELE 464 (473)
Q Consensus 433 ~~~~~~it~~df~~al~~~~ps~~~~~~~~~~ 464 (473)
......|+.++|..+|+.+.+.+++++++.+-
T Consensus 31 ~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~ 62 (83)
T d1wlza1 31 TMKTNTISREEFRAICNRRVQILTDEQFDRLW 62 (83)
T ss_dssp TTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCCCceEChhHHHHHHHHhCCCCChhHHHHHh
Confidence 34456799999999999999999998887753
No 329
>d1ug7a_ a.24.24.1 (A:) Domain from hypothetical 2610208m17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.21 E-value=54 Score=24.55 Aligned_cols=46 Identities=15% Similarity=0.300 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHcCCC
Q 012000 49 KLKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTP 94 (473)
Q Consensus 49 ~~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~~~~ 94 (473)
+-|.|+.+=..-+.+++.-|.||+.-||+.-|+.-...|.+.....
T Consensus 11 ~tk~~v~kW~a~~~kgtdFDSWGQLVEA~dEYq~lar~L~k~~~~q 56 (128)
T d1ug7a_ 11 VTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQILARHLQKEAQAQ 56 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455666666778899999999999999999999999998887644
No 330
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=46.08 E-value=4 Score=36.60 Aligned_cols=31 Identities=16% Similarity=0.362 Sum_probs=23.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHH-----cCCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVASE-----SQATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e-----~~~~~~~v~~ 282 (473)
+=|.|-|.+|||||-.++-.. .+.||..+++
T Consensus 13 iGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~p 48 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDP 48 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCT
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCccC
Confidence 679999999999999999753 2456655443
No 331
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.93 E-value=11 Score=30.24 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHH
Q 012000 56 LAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILT 88 (473)
Q Consensus 56 ~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~ 88 (473)
.|..+-.+|...=..|+|++|+.+|.+||+++.
T Consensus 12 ~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~ 44 (170)
T d1p5qa1 12 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLE 44 (170)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh
Confidence 344444555555566999999999999998764
No 332
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=44.91 E-value=12 Score=29.37 Aligned_cols=18 Identities=11% Similarity=0.246 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 012000 52 GYFELAKEEIAKAVRAEE 69 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D~ 69 (473)
+-++.|++++++|++.|.
T Consensus 81 ~~~~~Al~~~~~al~~~p 98 (153)
T d2fbna1 81 KDYPKAIDHASKVLKIDK 98 (153)
T ss_dssp TCHHHHHHHHHHHHHHST
T ss_pred cccchhhhhhhccccccc
Confidence 446888999999988876
No 333
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=44.15 E-value=7.8 Score=33.12 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=22.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
..+.+.|=..+|||||+.+|...++.
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~g~ 35 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDSKM 35 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHcCC
Confidence 35789999999999999999877654
No 334
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=43.87 E-value=5.3 Score=35.93 Aligned_cols=19 Identities=26% Similarity=0.452 Sum_probs=17.1
Q ss_pred EEEEcCCCCcHHHHHHHHH
Q 012000 252 LLLFGPPGNGKTMLAKAVA 270 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA 270 (473)
|=|.|-|.+|||||-.++-
T Consensus 3 v~lvG~pn~GKStlfn~lt 21 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAAT 21 (319)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EeEECCCCCCHHHHHHHHH
Confidence 5589999999999999994
No 335
>d1ufba_ a.24.16.3 (A:) Hypothetical protein TT1696 {Thermus thermophilus [TaxId: 274]}
Probab=43.83 E-value=18 Score=27.67 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHc
Q 012000 50 LKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 50 ~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
.++++.+|.+.+..|-..=+.|.|..|.-+.+++++...+++
T Consensus 4 a~~Wl~~A~~dL~~A~~~~~~~~y~~a~f~~qQavEk~lKAl 45 (127)
T d1ufba_ 4 ARDWLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEAALKGL 45 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 578999999999999888889999999888888888887775
No 336
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.34 E-value=14 Score=32.11 Aligned_cols=22 Identities=27% Similarity=0.214 Sum_probs=12.9
Q ss_pred hhhCCChHHHHHHHHHHHHHHH
Q 012000 67 AEEWGLVDDAIIHYKNAQRILT 88 (473)
Q Consensus 67 ~D~~g~~~~Al~~Y~~~i~~l~ 88 (473)
.-..|++++|+.+|.++++++.
T Consensus 87 y~~~~~~~~A~~~~~~a~~~~~ 108 (290)
T d1qqea_ 87 FKSGGNSVNAVDSLENAIQIFT 108 (290)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHHhhHHhh
Confidence 4555666666666666665543
No 337
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=42.99 E-value=12 Score=28.02 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=27.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~ 282 (473)
++|.||..|=|+++|.-+..++..+++.-+.
T Consensus 3 iilegpdccfkstvaaklskelkypiikgss 33 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKGSS 33 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEECCC
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecCch
Confidence 7899999999999999999999999886443
No 338
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=42.41 E-value=7.2 Score=33.16 Aligned_cols=27 Identities=22% Similarity=0.414 Sum_probs=22.1
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
|.-+|.+.|--+.|||||+.+|...+|
T Consensus 2 p~iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 2 PHLNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred CccEEEEEecCCCCHHHHHHHHHHHcC
Confidence 335688999999999999999876554
No 339
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.73 E-value=13 Score=28.84 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=21.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH---cCCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVASE---SQATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e---~~~~~~~v~~ 282 (473)
-|++||-.+|||+-.-..++. .+..++.+.+
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp 38 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKY 38 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 367899999999955554443 3556665553
No 340
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=41.58 E-value=6.3 Score=35.11 Aligned_cols=22 Identities=14% Similarity=0.441 Sum_probs=19.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVASE 272 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e 272 (473)
-|++.|..++|||+|+.+|...
T Consensus 26 ~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 26 QIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp EEEEEECSSSSHHHHHHHHHTS
T ss_pred eEEEEeCCCCCHHHHHHHHhCC
Confidence 5889999999999999999863
No 341
>d1o3ua_ a.24.16.3 (A:) Hypothetical protein TM0613 {Thermotoga maritima [TaxId: 2336]}
Probab=41.24 E-value=22 Score=27.12 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHc
Q 012000 53 YFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 53 ~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
++++|.+.+..|-..=+.|.|..|.-+.+++++...+++
T Consensus 3 ~l~~A~~dL~~A~~~l~~g~y~~a~f~~qQavEk~lKa~ 41 (126)
T d1o3ua_ 3 HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVKAV 41 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 578899999999888889999998888888888877765
No 342
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=41.10 E-value=6.4 Score=32.51 Aligned_cols=22 Identities=32% Similarity=0.447 Sum_probs=19.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHH
Q 012000 250 RGLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~ 271 (473)
-+|-+.|-+..|||||+.+|..
T Consensus 6 inIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 6 VNIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEEeccCCcHHHHHHHHHh
Confidence 4678999999999999999964
No 343
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.26 E-value=18 Score=29.42 Aligned_cols=24 Identities=4% Similarity=-0.098 Sum_probs=15.0
Q ss_pred HHHHHhhhCCChHHHHHHHHHHHH
Q 012000 62 AKAVRAEEWGLVDDAIIHYKNAQR 85 (473)
Q Consensus 62 ~~Av~~D~~g~~~~Al~~Y~~~i~ 85 (473)
..|.-.-..|+|++|+.+|.++|+
T Consensus 41 nlG~~~~~~g~~~~A~~~~~kAl~ 64 (192)
T d1hh8a_ 41 NIGCMYTILKNMTEAEKAFTRSIN 64 (192)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCchhHHHHHHHHHH
Confidence 344444556777777777777764
No 344
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.96 E-value=14 Score=29.54 Aligned_cols=20 Identities=10% Similarity=0.102 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 012000 50 LKGYFELAKEEIAKAVRAEE 69 (473)
Q Consensus 50 ~k~~~~~A~~~i~~Av~~D~ 69 (473)
-++-|++|+.++++|++.|.
T Consensus 16 ~~g~~~~Ai~~~~kal~~~p 35 (201)
T d2c2la1 16 VGRKYPEAAACYGRAITRNP 35 (201)
T ss_dssp HTTCHHHHHHHHHHHHHHCS
T ss_pred HcCCHHHHHHHHHHHHHhCC
Confidence 34456778888888777764
No 345
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=39.31 E-value=15 Score=28.84 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=21.3
Q ss_pred EEEEcCCCCcHHHHHHHHHH---HcCCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVAS---ESQATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~---e~~~~~~~v~~ 282 (473)
=+++||-.+|||+-.-..++ ..+.+++.++.
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~ 43 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKP 43 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEEe
Confidence 36789999999995555544 34666665553
No 346
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=38.57 E-value=11 Score=31.30 Aligned_cols=26 Identities=31% Similarity=0.506 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcE
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATF 277 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~ 277 (473)
++.|+|.|| ||+++.+.|.++..-.|
T Consensus 9 ~Rpivi~Gp---~K~ti~~~L~~~~p~~f 34 (199)
T d1kjwa2 9 ARPIIILGP---TKDRANDDLLSEFPDKF 34 (199)
T ss_dssp CCCEEEEST---THHHHHHHHHHHCTTTE
T ss_pred CCCEEEECc---CHHHHHHHHHHhCccce
Confidence 467999998 59999999999875444
No 347
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=37.64 E-value=8 Score=34.06 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=18.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHH
Q 012000 251 GLLLFGPPGNGKTMLAKAVAS 271 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~ 271 (473)
-+=|.|-|.+|||||-.++..
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~ 24 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTK 24 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHC
Confidence 366899999999999999964
No 348
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=37.48 E-value=52 Score=21.78 Aligned_cols=49 Identities=14% Similarity=0.147 Sum_probs=33.2
Q ss_pred CCChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHHhh
Q 012000 388 SLPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 388 ~l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 451 (473)
.++.+....+++.++- -|..++++|...+.. ...++|+.+|+..||+++
T Consensus 20 ris~ea~~~l~~~~e~----fi~~l~~~a~~~a~~-----------~kRkTi~~~DV~~Alk~~ 68 (68)
T d1htaa_ 20 RVSDDARIALAKVLEE----MGEEIASEAVKLAKH-----------AGRKTIKAEDIELARKMF 68 (68)
T ss_dssp CCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH-----------TTCSSCCHHHHHHHHHTC
T ss_pred hhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHH-----------hCCCcCCHHHHHHHHHhC
Confidence 4567777777776654 455566666555432 245789999999999863
No 349
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.94 E-value=5 Score=29.45 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012000 79 HYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKWQSQVSDRLQALNR 130 (473)
Q Consensus 79 ~Y~~~i~~l~~~~~~~~~~~~~~~~~~k~~~y~~raek~k~~i~~rl~~l~~ 130 (473)
.|..|+.++.+++.+=......+.-..+-..+++++.++.++++.....|..
T Consensus 30 ~y~eA~~~Y~~aie~l~~~~~~e~~~~~k~~l~~k~~eYl~RAE~LK~~l~~ 81 (93)
T d1wfda_ 30 RYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQ 81 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888888887531111111122233456788888888887766666654
No 350
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.66 E-value=23 Score=30.53 Aligned_cols=37 Identities=19% Similarity=0.047 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhhh-CCChHHHHHHHHHHHHHHHHH
Q 012000 54 FELAKEEIAKAVRAEE-WGLVDDAIIHYKNAQRILTEA 90 (473)
Q Consensus 54 ~~~A~~~i~~Av~~D~-~g~~~~Al~~Y~~~i~~l~~~ 90 (473)
|+.|.+++.+|-.+=. .|+|++|+.+|.+|+++..+.
T Consensus 33 ~~~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~ 70 (290)
T d1qqea_ 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA 70 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 6788888888876655 699999999999999887654
No 351
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.72 E-value=25 Score=26.99 Aligned_cols=46 Identities=13% Similarity=-0.039 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhhhCCC----hHHHHHH-----HHHHHHHHHHHcCCCCC
Q 012000 51 KGYFELAKEEIAKAVRAEEWGL----VDDAIIH-----YKNAQRILTEASSTPVP 96 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~~g~----~~~Al~~-----Y~~~i~~l~~~~~~~~~ 96 (473)
....++|+.++++.++.+.... |--|+.+ |.+|..++..+++.+++
T Consensus 51 ~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~ 105 (124)
T d2pqrb1 51 VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 105 (124)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCC
Confidence 3567889999999887654322 3444444 55677777777776654
No 352
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=35.15 E-value=19 Score=31.68 Aligned_cols=51 Identities=25% Similarity=0.286 Sum_probs=36.3
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHc----------CCcEEEEecCccchhhhhhhhhhhc
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASES----------QATFFNVSASSLTSKWVGEGEKLVR 298 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~----------~~~~~~v~~~~l~~~~~g~~~~~~~ 298 (473)
...|.||.=..|+|||..+-++...+ ..+++.|-+..+...|..+..+...
T Consensus 78 ~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW~~Ei~k~~~ 138 (298)
T d1z3ix2 78 NSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLG 138 (298)
T ss_dssp TCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHHHHHHHHHHG
T ss_pred cCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccchhhHHHHHHHHhhcC
Confidence 35689999999999998665544322 1246777778888889887766543
No 353
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=34.55 E-value=28 Score=26.10 Aligned_cols=34 Identities=18% Similarity=-0.035 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhhhC-----------CChHHHHHHHHHHH
Q 012000 51 KGYFELAKEEIAKAVRAEEW-----------GLVDDAIIHYKNAQ 84 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~~-----------g~~~~Al~~Y~~~i 84 (473)
+.-+++|++++++|.+.+.. .++++|+.+|+++.
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~~a~~~l~~~~~~~~~~a~~~~~~aa 50 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKAC 50 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCChhhhhhhccccccCHHHHHHHHhhhh
Confidence 34578899999998877542 34556666665554
No 354
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=33.98 E-value=28 Score=27.28 Aligned_cols=23 Identities=22% Similarity=0.135 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 012000 47 AYKLKGYFELAKEEIAKAVRAEE 69 (473)
Q Consensus 47 ~~~~k~~~~~A~~~i~~Av~~D~ 69 (473)
++.-.+-+++|++.+++|++.|.
T Consensus 73 ~~~~l~~~~~Ai~~~~~al~l~p 95 (168)
T d1kt1a1 73 CYLKLREYTKAVECCDKALGLDS 95 (168)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHhhhcccchhhhhhhhhccc
Confidence 34445557899999999999875
No 355
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.36 E-value=22 Score=26.51 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=28.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEEec
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNVSA 282 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~ 282 (473)
+.|||-|.|+|+-=|..+..+.|.+|-.++-
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~~i~~~~idy 32 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHDY 32 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCeEEEEc
Confidence 7899999999999999999999998887763
No 356
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.31 E-value=11 Score=32.49 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=22.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHHHcCC
Q 012000 250 RGLLLFGPPGNGKTMLAKAVASESQA 275 (473)
Q Consensus 250 ~~iLL~GPpGtGKT~La~aiA~e~~~ 275 (473)
-+|.+.|=.+.|||||+.+|.-.+|.
T Consensus 7 iNi~iiGHvD~GKsTl~~~ll~~~g~ 32 (239)
T d1f60a3 7 INVVVIGHVDSGKSTTTGHLIYKCGG 32 (239)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHSC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHcCC
Confidence 47899999999999999999876653
No 357
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=32.34 E-value=25 Score=23.89 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=29.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEEecC
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNVSAS 283 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~ 283 (473)
|.+|+-|||+-...|+.+..+.+.+|..++..
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~ 34 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENRGFDFEMINVD 34 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEeCCCCccHHHHHHHHHhcCceeEEEeec
Confidence 78999999999999999999999998888754
No 358
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=32.08 E-value=26 Score=29.74 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhhhC--------------------CChHHHHHHHHHHHHHH
Q 012000 52 GYFELAKEEIAKAVRAEEW--------------------GLVDDAIIHYKNAQRIL 87 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D~~--------------------g~~~~Al~~Y~~~i~~l 87 (473)
+-+++|++++++|++.... |++++|+.+|.++++..
T Consensus 26 g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~ 81 (366)
T d1hz4a_ 26 GNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 81 (366)
T ss_dssp TCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3467777777777765432 55666666666665544
No 359
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=31.78 E-value=23 Score=29.22 Aligned_cols=32 Identities=25% Similarity=0.162 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 55 ELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 55 ~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
++|.-++.+|.-.-..|+|++|+..|.+++++
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l 66 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAI 66 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhcc
Confidence 45667788899999999999999999999864
No 360
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.32 E-value=31 Score=25.78 Aligned_cols=27 Identities=11% Similarity=-0.079 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhCCChHHHHHHHHHHHH
Q 012000 59 EEIAKAVRAEEWGLVDDAIIHYKNAQR 85 (473)
Q Consensus 59 ~~i~~Av~~D~~g~~~~Al~~Y~~~i~ 85 (473)
-++.-|+-.-+.|+|++|+.+|+++++
T Consensus 74 ~~~~Lg~~y~~~g~~~~A~~~~~~aL~ 100 (122)
T d1nzna_ 74 YVFYLAVGNYRLKEYEKALKYVRGLLQ 100 (122)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 467788888999999999999999875
No 361
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=29.63 E-value=30 Score=23.21 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=29.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecC
Q 012000 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSAS 283 (473)
Q Consensus 251 ~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~ 283 (473)
.|.||+-|||+-..-|+.+..+.+.+|..++..
T Consensus 2 ~v~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i~ 34 (74)
T d1r7ha_ 2 SITLYTKPACVQCTATKKALDRAGLAYNTVDIS 34 (74)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEEeCCCChhHHHHHHHHHHcCCceEEEEcc
Confidence 378999999999999999999999999887654
No 362
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=28.36 E-value=26 Score=25.45 Aligned_cols=26 Identities=4% Similarity=0.146 Sum_probs=21.7
Q ss_pred HHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 61 IAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 61 i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
+..|+..-..|++++|+.+|++++..
T Consensus 20 ~~~g~~~~~~g~~~~A~~~~~~al~~ 45 (112)
T d1hxia_ 20 MEEGLSMLKLANLAEAALAFEAVCQK 45 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhccc
Confidence 55677778889999999999998854
No 363
>d1vh6a_ a.24.19.1 (A:) Flagellar export chaperone FliS {Bacillus subtilis [TaxId: 1423]}
Probab=27.94 E-value=50 Score=23.89 Aligned_cols=40 Identities=20% Similarity=0.047 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHH
Q 012000 50 LKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTE 89 (473)
Q Consensus 50 ~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~ 89 (473)
+.-.|+.|+..+.+|...-+.|+++++-..-.+++..+..
T Consensus 7 i~mLyd~~i~~l~~a~~ai~~~d~~~~~~~~~ka~~Ii~~ 46 (102)
T d1vh6a_ 7 TLMLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQE 46 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999999999999999888887777776654
No 364
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=27.92 E-value=12 Score=32.26 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=22.0
Q ss_pred CCceEEEEcCCCCcHHHHHHHHHHHcC
Q 012000 248 PARGLLLFGPPGNGKTMLAKAVASESQ 274 (473)
Q Consensus 248 ~~~~iLL~GPpGtGKT~La~aiA~e~~ 274 (473)
+..+|.+.|=.+.|||||+.+|...+|
T Consensus 23 ~~iNi~iiGHVD~GKSTL~~~Ll~~~g 49 (245)
T d1r5ba3 23 EHVNIVFIGHVDAGKSTLGGNILFLTG 49 (245)
T ss_dssp EEEEEEEEECGGGTHHHHHHHHHHHTT
T ss_pred CceEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 334688889999999999999976554
No 365
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.87 E-value=32 Score=22.01 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHH
Q 012000 43 NERTAYKLKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKN 82 (473)
Q Consensus 43 ~~~~~~~~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~ 82 (473)
+.+++++|++--.-.+-..++|++.- .|+.+.|+.+-++
T Consensus 2 ~~elvK~LR~~Tga~~~dcKkAL~e~-~gD~ekA~e~Lr~ 40 (52)
T d1aipc1 2 QMELIKKLREATGAGMMDVKRALEDA-GWDEEKAVQLLRE 40 (52)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHT-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHc-CCCHHHHHHHHHH
Confidence 45777888888877888889998854 4999999887654
No 366
>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}
Probab=27.87 E-value=58 Score=28.99 Aligned_cols=43 Identities=21% Similarity=-0.011 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHc
Q 012000 49 KLKGYFELAKEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEAS 91 (473)
Q Consensus 49 ~~k~~~~~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~l~~~~ 91 (473)
-...+...|-.+.++|-+....|+...|..+|..|..|+.-+-
T Consensus 34 W~~~w~~~a~~~~~~a~~~~~~g~~~~A~~~~~~A~~~~~~a~ 76 (360)
T d2jbwa1 34 WFDYWMSLANEYEQEAERKVALGHDLSAGELLMSAALCAQYAQ 76 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 3566888899999999999999999999999999999997664
No 367
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=25.44 E-value=33 Score=24.72 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=25.1
Q ss_pred CceEEEEcCCCCcHHHHHHHHHHHcCCcEEEEecCcc
Q 012000 249 ARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285 (473)
Q Consensus 249 ~~~iLL~GPpGtGKT~La~aiA~e~~~~~~~v~~~~l 285 (473)
.+.+.|.|--|+|-+.||+.+.+. |. .|+++|.
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~-G~---~VsGSD~ 40 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNE-GY---QISGSDI 40 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHH-TC---EEEEEES
T ss_pred CCEEEEEEECHHHHHHHHHHHHhC-CC---EEEEEeC
Confidence 468999999999999999988764 43 3444443
No 368
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=23.38 E-value=38 Score=23.72 Aligned_cols=48 Identities=13% Similarity=0.005 Sum_probs=29.2
Q ss_pred CChhhHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhcccccccccccCCCCcHHHHHHHHHhh
Q 012000 389 LPGGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVI 451 (473)
Q Consensus 389 l~~~~l~~La~~t~g~s~~dL~~l~~~A~~~a~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 451 (473)
++++..+.|+...+- -+..++++|...+- .....+|+.+|+..||++.
T Consensus 27 is~d~~~~l~~~l~~----~l~~i~~~a~~~~~-----------hakRKTvt~~DV~~Alkr~ 74 (82)
T d2huec1 27 ISGLIYEETRGVLKV----FLENVIRDAVTYTE-----------HAKRKTVTAMDVVYALKRQ 74 (82)
T ss_dssp ECTTHHHHHHHHHHH----HHHHHHHHHHHHHH-----------HTTCSEECHHHHHHHTTTT
T ss_pred chHHHHHHHHHHHHH----HHHHHHHHHHHHHH-----------HhCCCcCCHHHHHHHHHhc
Confidence 455556666554332 34555555554442 2234679999999999865
No 369
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=23.06 E-value=15 Score=32.43 Aligned_cols=47 Identities=26% Similarity=0.264 Sum_probs=26.8
Q ss_pred cChHHHHHHHHHHHhchhcchhhhhcCCCCCceEEEEcCCCCcHHHHHHHHHHHc---CCcEE
Q 012000 219 AGLEKAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES---QATFF 278 (473)
Q Consensus 219 vGl~~~k~~L~e~v~~p~~~~~~~~~~~~~~~~iLL~GPpGtGKT~La~aiA~e~---~~~~~ 278 (473)
.|++.+++.|..+ -.| .. ..+.|-+.|- .|||+.+..+++-+ |...-
T Consensus 24 ~~l~r~~~~l~~l-g~P----~~------~lkvI~VTGT--NGKTSt~~~i~~IL~~~g~~~g 73 (296)
T d1o5za2 24 PGLERISMLLSKL-GNP----HL------EYKTIHIGGT--NGKGSVANMVSNILVSQGYRVG 73 (296)
T ss_dssp CCSHHHHHHHHHT-TCG----GG------SSEEEEEECS--SSHHHHHHHHHHHHHHHTCCEE
T ss_pred CChHHHHHHHHHc-CCc----hh------hCCEEEEEec--CcHHHHHHHHHHHHHHcCCCcc
Confidence 4777777666542 222 10 1134555553 49999999887754 54443
No 370
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.95 E-value=20 Score=31.70 Aligned_cols=36 Identities=3% Similarity=-0.061 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHHH
Q 012000 51 KGYFELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~~ 86 (473)
...+++|++++++|++.+. .|++++|+..|.++++.
T Consensus 91 ~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~ 141 (315)
T d2h6fa1 91 QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ 141 (315)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhhccHHHHHHHHhhhhhh
Confidence 3345666666666666553 26666666666666653
No 371
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}
Probab=22.83 E-value=49 Score=22.91 Aligned_cols=30 Identities=10% Similarity=-0.065 Sum_probs=26.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHcCCcEEEEe
Q 012000 252 LLLFGPPGNGKTMLAKAVASESQATFFNVS 281 (473)
Q Consensus 252 iLL~GPpGtGKT~La~aiA~e~~~~~~~v~ 281 (473)
++|||-|+|+=+.-++.++.+.|.++-.+.
T Consensus 2 ~iLY~~~~S~~~~~v~~~l~e~gi~~e~~~ 31 (85)
T d1r5aa2 2 TVLYYLPASPPCRSVLLLAKMIGVELDLKV 31 (85)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEcCCCCHhHHHHHHHHHHcCCCCEEEE
Confidence 789999999999999999999998765443
No 372
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.69 E-value=44 Score=28.60 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHhhh---------------CCChHHHHHHHHHHHH
Q 012000 51 KGYFELAKEEIAKAVRAEE---------------WGLVDDAIIHYKNAQR 85 (473)
Q Consensus 51 k~~~~~A~~~i~~Av~~D~---------------~g~~~~Al~~Y~~~i~ 85 (473)
.+-|++|++.++++++.+- .|+|++|+.+|+++++
T Consensus 12 ~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 61 (388)
T d1w3ba_ 12 AGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIK 61 (388)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3457788888888877653 3566666666666553
No 373
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.62 E-value=26 Score=30.79 Aligned_cols=44 Identities=9% Similarity=-0.080 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhh---------------CC-ChHHHHHHHHHHHHH
Q 012000 43 NERTAYKLKGYFELAKEEIAKAVRAEE---------------WG-LVDDAIIHYKNAQRI 86 (473)
Q Consensus 43 ~~~~~~~~k~~~~~A~~~i~~Av~~D~---------------~g-~~~~Al~~Y~~~i~~ 86 (473)
+-+.+..-++.+++|++++++||+.+- -| ++++|+..|.++++.
T Consensus 48 ~~~~~~~~~e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~ 107 (315)
T d2h6fa1 48 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE 107 (315)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 556667777889999999999998862 24 599999999988765
No 374
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.40 E-value=35 Score=32.11 Aligned_cols=17 Identities=12% Similarity=-0.068 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012000 52 GYFELAKEEIAKAVRAE 68 (473)
Q Consensus 52 ~~~~~A~~~i~~Av~~D 68 (473)
+.+++|+.++++|++.+
T Consensus 166 ~~~~~A~~~y~~A~~l~ 182 (497)
T d1ya0a1 166 NQTSQAESYYRHAAQLV 182 (497)
T ss_dssp TCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHC
Confidence 33466666776666655
No 375
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.41 E-value=41 Score=26.94 Aligned_cols=31 Identities=26% Similarity=0.149 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhhCCChHHHHHHHHHHHHH
Q 012000 56 LAKEEIAKAVRAEEWGLVDDAIIHYKNAQRI 86 (473)
Q Consensus 56 ~A~~~i~~Av~~D~~g~~~~Al~~Y~~~i~~ 86 (473)
.-...+.++..+-..|++++|+.+|.+|+.+
T Consensus 10 ~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l 40 (179)
T d2ff4a2 10 RFVAEKTAGVHAAAAGRFEQASRHLSAALRE 40 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 3445778888889999999999999999865
No 376
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=37 Score=19.94 Aligned_cols=26 Identities=19% Similarity=0.552 Sum_probs=21.0
Q ss_pred CcHHHHHHHHHhhCCCCCHHHHHHHHHHHHh
Q 012000 439 LRYEDFQKAMAVIRPSLNKSKWEELEQWNRE 469 (473)
Q Consensus 439 it~~df~~al~~~~ps~~~~~~~~~~~w~~~ 469 (473)
|+-+||+.++. .+++++..+..|.+.
T Consensus 2 Lsd~dF~~vFg-----msr~eF~~LP~WKq~ 27 (36)
T d1unda_ 2 LSEQDFVSVFG-----ITRGQFAALPGWKQL 27 (36)
T ss_dssp CCHHHHHHHHS-----SCHHHHHHSCHHHHH
T ss_pred CCHHHHHHHHC-----cCHHHHHHCcHHHHH
Confidence 56789999884 568899999999874
Done!