BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012006
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 175/360 (48%), Gaps = 38/360 (10%)
Query: 108 FTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDAN 167
T+++SI+++ GW Y++ L + P L+F+ G + LL+ S+E
Sbjct: 132 LTDLKSIKQNKEGMGWSYLVFCLKDDVVLPALHFHQGDSK----------LLIESLEKYV 181
Query: 168 VFLVNDFDNRLQRTLSSLELPRAVSIASGSSTPVSIGDSPTNVNLERTNGGLGHDSHSIS 227
V + D R L S S + ++ D P ++ GL +
Sbjct: 182 VLCESPQDKR--------TLLVNCQNKSLSQSFENLLDEPAYGLIQ---AGLLDRRKLLW 230
Query: 228 QFHGRQKQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFGAFEKKF-DSQS 286
H +K K +DP I FS VT + ++ H D+
Sbjct: 231 AIHHWKKIK-KDPYTATMI----GFSKVTNYIFDSLRGSDPSTHQRPPSEMADFLSDAIP 285
Query: 287 ALDFDHKASYDTETIVNEIPVAPDPVEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMD 346
L + + E ++ I + PV R+ P+ EEWT +D+EGR+++
Sbjct: 286 GLKINQQEEPGFE-VITRIDLGERPV----------VQRREPVSLEEWTKNIDSEGRILN 334
Query: 347 SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 406
+ +++ IF GG+ H LR++ W FLLGY+ +DST ER L+ K EY +K QW+SIS
Sbjct: 335 VDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTKEERTQLQKQKTDEYFRMKLQWKSIS 394
Query: 407 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
EQ +R ++ R+ + LI+KDV RTDR+ F++G DNP + LL DIL+TY Y+FDLGY Q
Sbjct: 395 QEQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQ 454
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 174/369 (47%), Gaps = 71/369 (19%)
Query: 105 AVPFTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVE 164
+V E++SIRR P W Y+++V +G + P L+F+ GG R L + +++LL S +
Sbjct: 120 SVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQ 179
Query: 165 DANVFLVNDFDNRLQRTLSSLELPRAVSIASGSSTPVSIGDSPTNVNLERTNGGLGHDSH 224
D+RL L P S S S + + D + S+
Sbjct: 180 ----------DSRLY-----LVFPHDSSALSNSFHHLQLFDQDS--------------SN 210
Query: 225 SISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFGAFEKKFDS 284
+S+F QDP FS VT F R GA + + +
Sbjct: 211 VVSRF-------LQDPYS----TTFSSFSRVTNFFR---------------GALQPQPEG 244
Query: 285 QSALDFDHKASYDTET---IVNEIPVAPDP-VEFDKLTLVWGKPRQPPLGSEEWTTFLDN 340
+A D + E +++ + + P P VE R PP+ EEW +
Sbjct: 245 -AASDLPPPPDDEPEPGFEVISCVELGPRPTVE-----------RGPPVTEEEWARHVGP 292
Query: 341 EGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKR 400
EGR+ L+ RIF GG+ LRRE W FLLGY +++ T E + K EY +K
Sbjct: 293 EGRLQQVPELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTAEEHKAHIRKKTDEYFRMKL 352
Query: 401 QWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNF 460
QW+S+SPEQ RR + + LI++DV RTDR+ F++G +NP + LL DILLTY Y+F
Sbjct: 353 QWKSVSPEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHF 412
Query: 461 DLGYCQVIT 469
DLGY Q ++
Sbjct: 413 DLGYVQGMS 421
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 98/142 (69%)
Query: 325 RQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAER 384
R+ P+ EEW LD EGR++ +++++IF GG+ H LR++ W FLLGY+ +DST ER
Sbjct: 296 RREPVSLEEWNKSLDPEGRLVAVESMKQKIFRGGLSHSLRKQAWKFLLGYFPWDSTKEER 355
Query: 385 EYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPN 444
L+ K EY +K QW+S+S Q +R ++ R+ + LI+KDV RTDR+ F++G DNP
Sbjct: 356 TQLQKQKTDEYFRMKLQWKSVSEAQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPG 415
Query: 445 VHLLRDILLTYSFYNFDLGYCQ 466
+ LL DIL+TY Y+FDLGY Q
Sbjct: 416 LILLHDILMTYCMYDFDLGYVQ 437
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 108 FTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDAN 167
+++S+++ GW Y++ L + P L+F+ G + + +++++V+L S +D+
Sbjct: 132 LADLKSVKQSKEGMGWSYLVFCLKDDVMLPALHFHQGDSKLLIESLEKYVVLCESPQDSR 191
Query: 168 VFLVNDFDNRLQRTLSSL 185
LVN + L ++ +L
Sbjct: 192 TLLVNCQNKSLSQSFENL 209
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 93/145 (64%)
Query: 325 RQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAER 384
R PP+ EEW ++ EGR+ + L+ RIF GG+ LRRE W FLLGY +++S+ E
Sbjct: 277 RAPPVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSWESSAEEH 336
Query: 385 EYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPN 444
+ K EY +K QW+S+S EQ RR + + LI++DV RTDR+ F++G +NP
Sbjct: 337 KAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPENPG 396
Query: 445 VHLLRDILLTYSFYNFDLGYCQVIT 469
+ LL DILLTY Y+FDLGY Q ++
Sbjct: 397 LSLLHDILLTYCMYHFDLGYVQGMS 421
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 105 AVPFTEVRSIRRHTPAFGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVE 164
+V E++SIRR P W Y+++V +G + P L+F+ GG R L + +++LL S +
Sbjct: 119 SVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQ 178
Query: 165 DANVFLV 171
D+ ++LV
Sbjct: 179 DSRLYLV 185
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 329 LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLR 388
LG W L+ G+V + LRK IF+GG+D +R EVW FLL YY+++ST ERE LR
Sbjct: 396 LGVSAWLNHLNELGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALR 455
Query: 389 CIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLL 448
K+ EY I+++ S++PE+ R F +R + +DKDVVRTDR+ FF G+DNPNV +
Sbjct: 456 LQKRKEYSEIQQKRLSMTPEEHRAF--WRNVQFTVDKDVVRTDRNNQFFRGEDNPNVESM 513
Query: 449 RDILLTYSFYNFDLGYCQVIT 469
R ILL Y+ YN +GY Q ++
Sbjct: 514 RRILLNYAVYNPAVGYSQGMS 534
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 213/511 (41%), Gaps = 99/511 (19%)
Query: 45 LVYLKDNVTIHPTQFASERISGRLKLIKQ---------GSSLFMTWIPYKG--------- 86
L++ K V +HPT + ISG L L K GS + ++W+P
Sbjct: 31 LLFSKSKVFVHPTSKMKDNISGYLSLSKSKALGNSSVAGSDILLSWVPDSFLKNRPRDLS 90
Query: 87 --QNSNTRLSEKDRNLYTIR-------AVPFTEVRSIRRHTPAFGWQYIIVVLS---SGL 134
QN+ T + R I +V + SI P +GW Y +V++ SG
Sbjct: 91 VFQNAETLSNGSIREWVEIPQHLDYSFSVRLCSIYSIIFRPPRYGWNYGSIVINLRDSGE 150
Query: 135 AFPPLYFYTG----------------------------GVREFLATIKQHVLLVRSVEDA 166
+ PPL+F+ G L +K++ L +S ++
Sbjct: 151 SLPPLFFHDDECISTIEYGKQITRDRFDPFDESGNMFWGGTHLLMQLKKYASLEQSSHES 210
Query: 167 NVFLVNDFDNRLQRTLSSLELPRAVSI--ASGSSTPVSIGDSPTNVN------------- 211
++LVN S+EL + +S + SSTP + S + N
Sbjct: 211 QLYLVNPSPED-TVAFQSVELQKVISNNRLNSSSTPPTPRSSSSIFNPFRRALHDLSFTV 269
Query: 212 LERTNGGLGHDSHSISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFARE-TTSQLFREN 270
LER + + + + + K+ P +QVL + V K E +++F
Sbjct: 270 LERFSRVTNYGKSEVDRLMEHKVTKSILPHLPRELQVLLESKRVQKLTEEYDPARMFLAR 329
Query: 271 HSNGFGAFEKKFDSQSALDFDHKASYDTETIVNEIPVAPDPVEFDKLTLVWGKPRQPPLG 330
+ G + +SQ ++ + + + P F+ + + R PL
Sbjct: 330 WAEGIVEQSESNNSQPV---NNAGVWTDAQREEDSSLGP----FELVYIEERVKRDDPLS 382
Query: 331 SEEWTTFLDNEGRV-MDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRC 389
E+W + + G++ +D + + IF+GG+ LR+EVW FLL Y +DST ER +
Sbjct: 383 VEQWNSMFNAHGKLQVDVHRVLGIIFHGGIQPSLRKEVWPFLLSVYPWDSTSEERRVIYL 442
Query: 390 IKKSEYENIKRQW-QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNP----- 443
+ EY +KR+W + I + R+ F E++ I+KDV RTDR +F +D P
Sbjct: 443 SLQEEYCTLKRKWYEDIHKQFNDRW--FIEQRNRIEKDVHRTDRQHEYFQIEDLPHPDPQ 500
Query: 444 --------NVHLLRDILLTYSFYNFDLGYCQ 466
N+ +++DILLTY+ Y+ +LGY Q
Sbjct: 501 STFTGTNMNMEMMKDILLTYNEYDTELGYVQ 531
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 209/530 (39%), Gaps = 132/530 (24%)
Query: 44 ELVYLKDNVTIHPTQFASERISGRLKLIK-QGSS----LFMTWIPYK------------- 85
+L + V +HPT + + I G L L K +G++ + + WIP
Sbjct: 13 QLTSINHQVYVHPTPSSKDNIPGFLALAKPRGATTDKEILVAWIPESKLQESAADFESYV 72
Query: 86 -------GQNSNTRLSEKDRNLYTIR---------AVPFTEVRSIRRHTPAFGWQYIIVV 129
G +++ L+ + + ++P +++ S++ P+ GW + +
Sbjct: 73 KVDIKESGTPASSSLNLAETLVSPPPSSSFSSYAFSIPISDIFSLQVKQPSLGWWWGSIT 132
Query: 130 L---SSGLAFPPLYFYTG-----------------------------GVREFLATIKQHV 157
+ S PPLYF+ G F+ + ++
Sbjct: 133 IHTRSKEDQLPPLYFHDAESQSTIMEQKRRNKKFETFDSESGSSMFWGGDHFIQVLSKYA 192
Query: 158 LLVRSVEDANVFLVNDFDNRLQRTLSSLELPRAVSIASGSSTPVS-IGDSPTNVNLERTN 216
L R+ D + LVN + +R ++ GS P + P R
Sbjct: 193 NLERAESDHSFLLVNPREGDAERF--------GTNLTGGSEEPSQLVAGIPG-----RGA 239
Query: 217 GGLGHDSHSISQFHGRQKQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFG 276
GG D G Q QKA DI +L + VT+ R+ + ++ +
Sbjct: 240 GGDPVD-------RGAQVQKA---FSDIRWGLLSNLAKVTQLTRKVSQGVWDSSPQPVKQ 289
Query: 277 AFEKKFDSQSALDFDHKASYDTE---TIVNEIPVAPDPVEFD------------KLTLVW 321
K + DFD Y + ++ E A V FD +L
Sbjct: 290 LLMKPEVKKIGDDFDSARIYLAKWALSVAEESQRAKLKVLFDDELRELVSDEGFELIDAE 349
Query: 322 GKP-RQPPLGSEEWTTFLDNEGR-VMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDS 379
P R+ + EW F D GR ++ N +++RIF+GG+ +R E W FLLG Y +DS
Sbjct: 350 NNPQRRNEVSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDS 409
Query: 380 TYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDG 439
T AER+ L + +Y +K++W E R +R++ I+KDV RTDR++TFF
Sbjct: 410 TAAERKELVSKLRVDYNRLKKEWW--VQEDKERDDFWRDQLSRIEKDVHRTDRNITFFAE 467
Query: 440 DD---------------------NPNVHL--LRDILLTYSFYNFDLGYCQ 466
D N N+HL LRD+L+TY+ +N +LGY Q
Sbjct: 468 CDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDMLITYNQHNKNLGYVQ 517
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 219/565 (38%), Gaps = 157/565 (27%)
Query: 32 SKRSSSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSS----LFMTWIPYKGQ 87
+KR S S EL+Y K +HPT + I G L L + ++ + ++++ K
Sbjct: 7 AKRKKSISSNEVELLYTKSKTYLHPTTSKKDNIPGYLSLSRGANAANRDIIISFMSEKQL 66
Query: 88 NS--------------------------NTRLSEKDRNLYTIR------------AVPFT 109
+S N+R S K RNL + ++P +
Sbjct: 67 SSEELKAYENVDIADLQDDLEALKLGGTNSRSSGK-RNLNIVSKPPTSSAFGFCFSIPIS 125
Query: 110 EVRSIRRHTPAFGWQY--IIVVLSSGLAFPPLYF-------------------------- 141
V SI+ P+ GW + II+ G P ++F
Sbjct: 126 FVYSIQVRKPSVGWWFGSIIINTQDGEKLPIVFFHDDESPSTLKNQKVRNQRFDPFGDNG 185
Query: 142 --YTGGVREFLATIKQHVLLVRSVEDANVFLVNDFDNRLQRTLSSLELPRAVSIASGSST 199
Y GG +F+ + + + +S + +V+L+N N L R + + P+ +
Sbjct: 186 EMYWGG-SDFMNALGKFADVQKSSVEPSVYLINPESNDL-RNFAPFKEPKTAKTETNQE- 242
Query: 200 PVSIGDSPTNVNLERTNGGLGHDSHSISQFHGRQKQKAQDPARDISIQVLEK-FSLVTKF 258
P + D +++F K K + S + + LV +
Sbjct: 243 PFKLPD--------------------VNKFFANAKWKVLETVATFSAKTRNQVLDLVDEN 282
Query: 259 ARETTSQLFRENHSNGFGAFEKKFDS-------------QSALDFDHKASYDTET---IV 302
A Q+ + G +FDS + A + K D E I
Sbjct: 283 APMPIKQIINKPEVQKIG---NEFDSARVYLAKWAAQVKEEAEEAHRKYQLDDEIYNKIN 339
Query: 303 NEIPVAPDPVEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMDS-NALRKRIFYGGVDH 361
E+ V + E V R+ P+ EW D GR++ S + ++ RIF+GG++
Sbjct: 340 KELGVGSN-TEILTDEEVSKTSRRKPISKVEWEGLFDFSGRLIISIDEIKDRIFHGGLED 398
Query: 362 KLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKG 421
+R E W FLL Y +DS+ ER+ LR ++ YE IK +W ++ + R ++++K
Sbjct: 399 CIRGEAWLFLLNVYPWDSSAEERKTLRNSFQTAYEEIKLKW--VNDDDKRSVDFWKDQKH 456
Query: 422 LIDKDVVRTDRSVTFF----------------------------DGDD---------NPN 444
I+KD+ RTDR+++ F + DD NP+
Sbjct: 457 RIEKDINRTDRNLSIFQNKKKISISGVGSDRLPTTRESSPETPDEADDDEFDVSNITNPH 516
Query: 445 VHLLRDILLTYSFYNFDLGYCQVIT 469
+ +R+ILLTY+ +N +LGY Q +T
Sbjct: 517 LFKMREILLTYNEHNVNLGYVQGMT 541
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 323 KPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYA 382
KP +PPL E+ T+L++EG++ LR RI++GGV+ LR+ VW +LL Y T
Sbjct: 247 KPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGR 306
Query: 383 EREYLRCIKKSEYENIKRQW-QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDG-D 440
ER K EYE +K +W Q ++PE + + KDV+RTDR+ ++ G +
Sbjct: 307 ERMDYMKRKSREYEQLKSEWAQRVNPEDLEFI------RSTVLKDVLRTDRAHPYYAGPE 360
Query: 441 DNPNVHLLRDILLTYSFYNFDLGYCQVIT 469
D P++ L D+L TY+ + + YCQ ++
Sbjct: 361 DGPHLRALHDLLTTYAVTHPQVSYCQGMS 389
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 323 KPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYA 382
KP +PPL E+ T+L++EG++ LR RI++GGV+ LR+ VW +LL Y T
Sbjct: 193 KPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGR 252
Query: 383 EREYLRCIKKSEYENIKRQW-QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDG-D 440
ER K EYE +K +W Q +PE + + KDV+RTDR+ ++ G +
Sbjct: 253 ERMDYMKRKSREYEQLKSEWAQRANPEDLEFI------RSTVLKDVLRTDRAHPYYAGPE 306
Query: 441 DNPNVHLLRDILLTYSFYNFDLGYCQVIT 469
D P++ L D+L TY+ + + YCQ ++
Sbjct: 307 DGPHLRALHDLLTTYAVTHPQVSYCQGMS 335
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 26/170 (15%)
Query: 325 RQPPLGSEEWTTFLDNEGRV-MDSNALRKRIFYGGV-DHKLRREVWAFLLGYYAYDSTYA 382
R P+ ++W + D+EGR+ + N ++ IF+GG+ D R+EVW FLLG Y +DS+
Sbjct: 356 RNHPMTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSED 415
Query: 383 EREYLRCIKKSEYENIKRQW--QSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGD 440
ER+ LR EY +K++W + ++ + ++++ I+KDV R DR++ + +
Sbjct: 416 ERKQLRKALHDEYMELKQKWVDREVNLDNDEE-EYWKDQLFRIEKDVKRNDRNIDIYKYN 474
Query: 441 ---------------------DNPNVHLLRDILLTYSFYNFDLGYCQVIT 469
NPN+ L DIL TY+ +N +LGY Q +T
Sbjct: 475 TSDNLPFPEDTAPTTDDDDSIKNPNLKKLADILTTYNIFNPNLGYVQGMT 524
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 28/125 (22%)
Query: 44 ELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLFMT-----WIPYKGQNSNTRLSEKDR 98
EL++ K V IHPT+ + +SG L + Q +S +T WIP +NS L+E+D
Sbjct: 4 ELLFCKSQVYIHPTKNLQDNVSGYLLITHQSNSETITSSTISWIP---ENS---LNEEDI 57
Query: 99 NLYT---IRAVPFTEVR---SIRRHTPAFG--------WQYIIVVL---SSGLAFPPLYF 141
N R + +R S R+ G WQ+ I VL S P ++
Sbjct: 58 NFLNNAETRNINEKILRLPVSSRKLNTLLGSGSFLSSNWQFTIPVLSLYSVQFKLPNTWW 117
Query: 142 YTGGV 146
Y +
Sbjct: 118 YGSCI 122
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 55/193 (28%)
Query: 325 RQPPLGSEEWTTFLD-NEGRV-MDSNALRKRIFYGGVDH-KLRREVWAFLLGYYAYDSTY 381
RQ PL +W + D N+GR+ + N ++ IF+GG+++ LR +VW FLL Y +DS+
Sbjct: 349 RQFPLTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDSSQ 408
Query: 382 AEREYLRCIKKSEYENIKRQWQSISPEQARRFTKF---------RERKGLIDKDVVRTDR 432
ER + +EY+ +K W ++ F +F ++ I KDV R DR
Sbjct: 409 DERVQIDQTLAAEYDQLKLTW-------SKDFLQFDDEDEEEYWNDQLFRISKDVRRCDR 461
Query: 433 SVTFF---------------------------------DGDD---NPNVHLLRDILLTYS 456
++ F D DD NP++ L++IL+TY+
Sbjct: 462 NLEIFQYNTIDGLPPPPQQLPANENNSTSPESANDESDDADDGVRNPHLIHLQNILITYN 521
Query: 457 FYNFDLGYCQVIT 469
YN +LGY Q +T
Sbjct: 522 VYNTNLGYVQGMT 534
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 324 PRQPP-----LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD 378
P +PP L + W+ + +E + LR+ ++YGGV+H++R++VW FLLG+Y +
Sbjct: 528 PDRPPGASGGLTKDVWSKYQKDEKNYKELELLRQ-VYYGGVEHEIRKDVWPFLLGHYKFG 586
Query: 379 STYAEREYLRCIKKSEYENIKRQWQSI 405
+ E E + + Y+ + +W++
Sbjct: 587 MSKKEMEQVDTAVAARYQQVLAEWKAC 613
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 22 GSSSMMRSDSSKRS---SSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLF 78
GS+S R + R S ++ L+Y K+NV + P + E + G L L + +L
Sbjct: 232 GSASEDRLAACAREYVESLHQNSRTRLLYGKNNVLVQPKE-DMEAVPGYLSLHQSAENLT 290
Query: 79 MTWIPYKGQNSNTRLSEKDRNLYTIRA--VPFTEVRSIRRHTPAFGWQYIIVVLSSGLAF 136
+ W P + N SE ++++Y A VPF+++ I H G +++V G+
Sbjct: 291 LKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQIVCIHCHQQKSG-GTLVLVSQDGIQR 349
Query: 137 PPLYFYTGG-VREFLATIKQHVL 158
PPL+F GG + FL+ ++ +L
Sbjct: 350 PPLHFPQGGHLLSFLSCLENGLL 372
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 423 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
IDKDV R DR+ +F N+ LRDI+ +Y + + D+GY Q
Sbjct: 796 IDKDVQRCDRNYWYFT---TSNLERLRDIMCSYVWEHLDMGYVQ 836
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 324 PRQPP-----LGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD 378
P +PP L + W+ + ++ + LR+ ++YGG++H++R++VW FLLG+Y +
Sbjct: 528 PDRPPGASAGLTKDVWSKYQKDKKNYKELELLRQ-VYYGGIEHEIRKDVWPFLLGHYKFG 586
Query: 379 STYAEREYLRCIKKSEYENIKRQWQSI 405
+ E E + + + Y+ + +W++
Sbjct: 587 MSKKEMEQVDAVVAARYQQVLAEWKAC 613
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 22 GSSSMMRSDSSKRS---SSSESEGAELVYLKDNVTIHPTQFASERISGRLKLIKQGSSLF 78
GS+S R + R S ++ L+Y K++V + P + E + G L L + SL
Sbjct: 232 GSASEDRLAACARECVESLHQNSRTRLLYGKNHVLVQPKE-DMEAVPGYLSLHQSAESLT 290
Query: 79 MTWIPYKGQNSNTRLSEKDRNLYTIRA--VPFTEVRSIRRHTPAFGWQYIIVVLSSGLAF 136
+ W P + N SE ++++Y A VPF++V I H G +++V G+
Sbjct: 291 LKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQVVCIHCHQQKSG-GTLVLVSQDGIQR 349
Query: 137 PPLYFYTGG-VREFLATIKQHVL 158
PPL+F GG + FL+ ++ +L
Sbjct: 350 PPLHFPQGGHLLSFLSCLENGLL 372
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 423 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
IDKDV R DR+ +F PN+ LRD++ +Y + + D+GY Q
Sbjct: 797 IDKDVQRCDRNYWYFT---PPNLERLRDVMCSYVWEHLDVGYVQ 837
>sp|Q8IYX1|TBC21_HUMAN TBC1 domain family member 21 OS=Homo sapiens GN=TBC1D21 PE=2 SV=1
Length = 336
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 325 RQPPLGSEEWTTFLDNEGRVMDS-NALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAE 383
R+PP+ EW +F D G + S + + I G+ +R E W FL GY+++ S+ E
Sbjct: 23 RKPPIDKTEWDSFFDESGHLAKSRDFICVNILERGLHPFVRTEAWKFLTGYFSWQSSQDE 82
Query: 384 REYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNP 443
R + +++ Y+ + + ++ I P F E + I +D+ + +D D
Sbjct: 83 RLTVDSMRRKNYKALCQMYEKIQPLLENLHRNFTETRNNIARDIQKI------YDKDPLG 136
Query: 444 NV-----HLLRDILLTY 455
NV L + +LL+Y
Sbjct: 137 NVLIDKKRLEKILLLSY 153
>sp|Q80XC3|US6NL_MOUSE USP6 N-terminal-like protein OS=Mus musculus GN=Usp6nl PE=1 SV=2
Length = 819
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 331 SEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCI 390
+ +W L R ++ +RI Y G+ +LR EVWA LL E ++
Sbjct: 74 TSKWLKMLKKWERYKNTEKFHRRI-YKGIPLQLRGEVWALLL----------EIPKMKEE 122
Query: 391 KKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRD 450
+ Y +K + + SP+ R+ ID DV RT R F L
Sbjct: 123 TRDLYSKLKHRARGCSPD-------IRQ----IDLDVNRTFRDHIMFRDRYGVKQQSLFH 171
Query: 451 ILLTYSFYNFDLGYCQVIT 469
+L YS YN ++GYCQ ++
Sbjct: 172 VLAAYSIYNTEVGYCQGMS 190
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + ++ +RI Y G+ +LR EVWA LL E ++ +
Sbjct: 76 KWLKMLKGWEKYKNTEKFHRRI-YKGIPLQLRGEVWALLL----------EIPKMKEETR 124
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y +K + + SP+ R+ ID DV RT R F L +L
Sbjct: 125 DLYSKLKHRARGCSPD-------IRQ----IDLDVNRTFRDHIMFRDRYGVKQQSLFHVL 173
Query: 453 LTYSFYNFDLGYCQVIT 469
YS YN ++GYCQ ++
Sbjct: 174 AAYSIYNTEVGYCQGMS 190
>sp|Q9VYY9|Y1727_DROME TBC1 domain family member CG11727 OS=Drosophila melanogaster
GN=CG11727 PE=1 SV=3
Length = 807
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 30/135 (22%)
Query: 334 WTTFLDN-EGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDST-YAEREYLRCIK 391
W T L++ EG + N + G+ H R VW L G D YAE Y++
Sbjct: 91 WATILNDWEGALKRKNPCVSELVRRGIPHHFRAIVWQQLSGASDGDKKQYAE--YIKATS 148
Query: 392 KSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDI 451
E +I +D+ RT V FF D P L ++
Sbjct: 149 ACE--------------------------KVIRRDIARTYPEVEFFKEKDGPGQEALFNV 182
Query: 452 LLTYSFYNFDLGYCQ 466
+ YS ++ ++GYCQ
Sbjct: 183 IKAYSLHDREVGYCQ 197
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 300 TIVNEIPVAPD-PVEFDK-LTL-VWGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFY 356
+VN + V+PD P + + LT +W K Q + TT+ + E L + I+Y
Sbjct: 515 ALVNHMIVSPDLPCDAGQGLTASIWEKYIQ------DSTTYPEQE--------LLRLIYY 560
Query: 357 GGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQW 402
GGV ++RR VW FLLG+Y + T ER+ + + Y +W
Sbjct: 561 GGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYAQTMSEW 606
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 406 SPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYC 465
SPE +T R I+KDV R DRS +F N+ LR+I+ +Y + + ++GY
Sbjct: 870 SPELLDLYTVNLHR---IEKDVQRCDRSYWYFTA---ANLEKLRNIMCSYIWQHIEIGYV 923
Query: 466 Q 466
Q
Sbjct: 924 Q 924
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 300 TIVNEIPVAPD-PVEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGG 358
+VN + V+PD P + + L + W +L + + LR I+YGG
Sbjct: 570 ALVNHMIVSPDLPCDAGQ-----------GLTARIWEQYLHDSTSYEEQELLR-LIYYGG 617
Query: 359 VDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQW 402
+ ++R+ VW FLLG+Y + T ER+ + + Y +W
Sbjct: 618 IQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAEW 661
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 406 SPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYC 465
SPE +T R I+KDV R DR+ +F N+ LR+I+ +Y + + ++GY
Sbjct: 925 SPELLDLYTVNLHR---IEKDVQRCDRNYWYFTP---ANLEKLRNIMCSYIWQHIEIGYV 978
Query: 466 Q 466
Q
Sbjct: 979 Q 979
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 324 PRQPPLGSEE-----WTTFLDNEGR---VMDSNALRKRIFYGGVDHKLRREVWAFLLGYY 375
P P + E+ W + GR V+ + RK I G V +++R E+W G
Sbjct: 203 PGNPTMVKEKAKLRLWFDYFRENGRNLAVVQTPMFRKLIRIG-VPNRMRGEIWELCSGAM 261
Query: 376 AYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVT 435
Y+R EYE I E A + ++ + I+KD+ R+ +
Sbjct: 262 ----------YMRYANSGEYERILN-------ENAGKTSQAIDE---IEKDLKRSLPEYS 301
Query: 436 FFDGDDNPNVHLLRDILLTYSFYNFDLGYCQVI 468
+ ++ + LR++L YS+ N D+GYCQ +
Sbjct: 302 AYQTEEG--IQRLRNVLTAYSWKNPDVGYCQAM 332
>sp|Q09830|YAD4_SCHPO TBC domain-containing protein C4G8.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G8.04 PE=1 SV=1
Length = 772
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 423 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
ID D+ RT FF G P + LR IL+ YS +N +GYCQ
Sbjct: 547 IDMDINRTMAKNVFFGGK-GPGIPKLRRILVAYSRHNPHIGYCQ 589
>sp|Q96CN4|EVI5L_HUMAN EVI5-like protein OS=Homo sapiens GN=EVI5L PE=1 SV=1
Length = 794
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 422 LIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
LI +D+ RT FF G D+ +L +++ YS + ++GYCQ
Sbjct: 153 LIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQ 197
>sp|Q8IZP1|TBC3A_HUMAN TBC1 domain family member 3 OS=Homo sapiens GN=TBC1D3 PE=2 SV=5
Length = 549
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNI----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+DV T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDVSGTLRKHIFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|Q28CB1|TBD2B_XENTR TBC1 domain family member 2B OS=Xenopus tropicalis GN=tbc1d2b PE=2
SV=1
Length = 943
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 337 FLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYE 396
F R M + K + G+ H+ R +W + + IKK + E
Sbjct: 621 FASTVNREMACSPELKALVRNGIPHEHRSRMWKWFTNLH--------------IKKLKDE 666
Query: 397 NIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYS 456
+QS+ K I+ D++RT + + + + LR++LL YS
Sbjct: 667 AAPGYFQSLL---QNALEKQNPASKQIELDLMRTLPNNKHYTSPTSEGIQKLRNVLLAYS 723
Query: 457 FYNFDLGYCQVI 468
+ N D+GYCQ I
Sbjct: 724 WRNPDIGYCQGI 735
>sp|A6NER0|TBC3F_HUMAN TBC1 domain family member 3F OS=Homo sapiens GN=TBC1D3F PE=2 SV=2
Length = 549
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNT----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+DV T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDVSGTLRKHIFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|P0C7X1|TBC3H_HUMAN TBC1 domain family member 3H OS=Homo sapiens GN=TBC1D3H PE=2 SV=2
Length = 549
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNI----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+D+ T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDISGTLRKHMFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|Q6DHY5|TBC3G_HUMAN TBC1 domain family member 3G OS=Homo sapiens GN=TBC1D3G PE=2 SV=2
Length = 549
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNI----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+D+ T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDISGTLRKHMFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 19/131 (14%)
Query: 337 FLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYD-STYAEREYLRCIKKSEY 395
F R M + K + G+ H+ R +VW + + + E +Y + + +
Sbjct: 643 FASTMNREMACSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDSMEPDYFQTLLQKAL 702
Query: 396 ENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTY 455
E Q+ + +Q I+ D++RT + + + + LR +LL +
Sbjct: 703 EK-----QNPASKQ-------------IELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAF 744
Query: 456 SFYNFDLGYCQ 466
S+ N D+GYCQ
Sbjct: 745 SWRNPDIGYCQ 755
>sp|A6NDS4|TBC3B_HUMAN TBC1 domain family member 3B OS=Homo sapiens GN=TBC1D3B PE=2 SV=1
Length = 549
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNI----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+D+ T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDISGTLRKHMFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|Q6IPX1|TBC3C_HUMAN TBC1 domain family member 3C OS=Homo sapiens GN=TBC1D3C PE=2 SV=2
Length = 549
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 333 EWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKK 392
+W L + + S L R Y G+ +R +W+ LL E ++
Sbjct: 77 KWVDMLGDWEKYKSSRKLIDRA-YKGMPMNIRGPMWSVLLNI----------EEMKLKNP 125
Query: 393 SEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDIL 452
Y+ +K E+ +R ++ +R ID+D+ T R FF L IL
Sbjct: 126 GRYQIMK--------EKGKRSSEHIQR---IDRDISGTLRKHMFFRDRYGTKQRELLHIL 174
Query: 453 LTYSFYNFDLGYCQVIT 469
L Y YN ++GYC+ ++
Sbjct: 175 LAYEEYNPEVGYCRDLS 191
>sp|Q9UPU7|TBD2B_HUMAN TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2
Length = 963
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 423 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
I+ D++RT + + + + LR++LL +S+ N D+GYCQ
Sbjct: 710 IELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQ 753
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 331 SEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCI 390
+ +W L S+ L R+ Y G+ +R VW+ LL I
Sbjct: 74 TSKWMEMLGEWETYKHSSKLIDRV-YKGIPMNIRGPVWSVLLN----------------I 116
Query: 391 KKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRD 450
++ + +N R I E+ +R + E ID DV T R+ FF L
Sbjct: 117 QEIKLKNPGRY--QIMKERGKRSS---EHIHHIDLDVRTTLRNHVFFRDRYGAKQRELFY 171
Query: 451 ILLTYSFYNFDLGYCQVIT 469
ILL YS YN ++GYC+ ++
Sbjct: 172 ILLAYSEYNPEVGYCRDLS 190
>sp|O60447|EVI5_HUMAN Ecotropic viral integration site 5 protein homolog OS=Homo sapiens
GN=EVI5 PE=1 SV=3
Length = 810
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 26/115 (22%)
Query: 352 KRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQAR 411
K + + G+ H R VW L + E L+ E
Sbjct: 157 KELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKMTSPCE----------------- 199
Query: 412 RFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
LI +D+ RT FF D+ +L +++ YS + ++GYCQ
Sbjct: 200 ---------KLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQ 245
>sp|Q9D3N8|GRTP1_MOUSE Growth hormone-regulated TBC protein 1 OS=Mus musculus GN=Grtp1
PE=2 SV=1
Length = 359
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 384 REYLRCIKKSEYENIKRQWQSISPEQARR------FTKFRERKGLIDKD-VVRTDRSVTF 436
+ Y+R K E+ R W ++S QAR + + E + D +RTD + TF
Sbjct: 68 KRYVR--KGIPLEHRARVWMAVSGAQARMDQSPGYYHRLLEGESSSSLDEAIRTDLNRTF 125
Query: 437 -----FDGDDNPNVH-LLRDILLTYSFYNFDLGYCQVIT 469
F +P + L ++LL Y +N D+GYCQ
Sbjct: 126 PDNVMFRKTADPCLQKTLYNVLLAYGLHNPDVGYCQCCA 164
>sp|Q5ZJ17|RBG1L_CHICK Rab GTPase-activating protein 1-like OS=Gallus gallus GN=RABGAP1L
PE=2 SV=1
Length = 816
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 25/109 (22%)
Query: 358 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 417
GV LR EVW L G + ++ + L + ++ EN+
Sbjct: 539 GVPEALRAEVWQLLAGCHDNEAMLDKYRILITMDSAQ-ENV------------------- 578
Query: 418 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
I +D+ RT + +F + L I YS Y+ D+GYCQ
Sbjct: 579 -----ITRDIHRTFPAHDYFKDTEGDGQESLYKICKAYSVYDEDIGYCQ 622
>sp|Q5RCW6|RBG1L_PONAB Rab GTPase-activating protein 1-like OS=Pongo abelii GN=RABGAP1L
PE=2 SV=1
Length = 815
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 25/109 (22%)
Query: 358 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 417
GV LR EVW L G +D+ Y I TK
Sbjct: 538 GVPEALRAEVWQLLAG--CHDNQAMLDRYRILI-----------------------TKDS 572
Query: 418 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
++ +I +D+ RT + +F L I YS Y+ D+GYCQ
Sbjct: 573 AQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQ 621
>sp|Q5R372|RBG1L_HUMAN Rab GTPase-activating protein 1-like OS=Homo sapiens GN=RABGAP1L
PE=1 SV=1
Length = 815
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 25/109 (22%)
Query: 358 GVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFR 417
GV LR EVW L G +D+ Y I TK
Sbjct: 538 GVPEALRAEVWQLLAG--CHDNQAMLDRYRILI-----------------------TKDS 572
Query: 418 ERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
++ +I +D+ RT + +F L I YS Y+ D+GYCQ
Sbjct: 573 AQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQ 621
>sp|Q7T2D0|SGSM3_DANRE Small G protein signaling modulator 3 OS=Danio rerio GN=sgsm3 PE=2
SV=1
Length = 755
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 347 SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 406
S+ LR + GG+ H +R ++W L G T ++ Y +K S ++ Q
Sbjct: 105 SDRLRSLVL-GGIPHSMRPQLWMRLSGALQKKRT-SDISYREIVKNSSNDDTTAAKQ--- 159
Query: 407 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
I+KD++RT + F+ + V LR +L ++ D+GYCQ
Sbjct: 160 ----------------IEKDLLRTMPTNACFNTLTSVGVPKLRRVLRGLAWLYPDIGYCQ 203
>sp|P48566|GYP3_YEAST GTPase-activating protein GYP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSB3 PE=1 SV=1
Length = 633
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
Query: 420 KGLIDKDVVRTDRSVTFFDG----------DDNPNVHLLRDILLTYSFYNFDLGYCQVIT 469
K + D D++ D + TF D + P + LR +L+ +S YN +GYCQ +
Sbjct: 268 KQVQDLDIIERDLNRTFPDNIHFQSSLHNKEGPPIIKSLRRVLVAFSLYNPKIGYCQSMN 327
>sp|Q8VCZ6|SGSM3_MOUSE Small G protein signaling modulator 3 OS=Mus musculus GN=Sgsm3 PE=1
SV=1
Length = 750
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 347 SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 406
S LR + G+ H +R ++W L G +E Y IK S + ++I+
Sbjct: 104 SEKLRSLVL-AGIPHGMRPQLWMRLSGALQKKKN-SELSYREIIKNSSND------ETIA 155
Query: 407 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQ 466
+Q I+KD++RT S F ++ V LR +L ++ ++GYCQ
Sbjct: 156 AKQ-------------IEKDLLRTMPSNACFANVNSIGVPRLRRVLRALAWLYPEIGYCQ 202
>sp|O48538|RBOHF_ARATH Respiratory burst oxidase homolog protein F OS=Arabidopsis thaliana
GN=RBOHF PE=1 SV=1
Length = 944
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 181 TLSSLELPRAVSIA-------SGSSTPVSIGDSPTNVNLERTNGGLGHDSHSISQFHGRQ 233
L S+E A+++ +G TPVSI SPT ++RT+ S+ QF
Sbjct: 57 VLRSVEPATAINVIGDISDDNTGIMTPVSISRSPT---MKRTS------SNRFRQFSQEL 107
Query: 234 KQKAQDPARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFGA 277
K +A A+ +S Q L++FS F+ T+ N S G G
Sbjct: 108 KAEAVAKAKQLS-QELKRFSWSRSFSGNLTTTSTAANQSGGAGG 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,704,478
Number of Sequences: 539616
Number of extensions: 7258868
Number of successful extensions: 21617
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 21478
Number of HSP's gapped (non-prelim): 96
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)