BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012009
(473 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255574875|ref|XP_002528344.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
gi|223532212|gb|EEF34016.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
Length = 510
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/451 (89%), Positives = 428/451 (94%), Gaps = 3/451 (0%)
Query: 17 NKKDLGSFCFSSTSQ--FSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEK 74
KKDLG FSS S +S+ KCKK ++SKK+VSVMAPQQSER PATTGSVK AMT+TEK
Sbjct: 15 TKKDLGLSAFSSQSSPFYSIPKCKK-SISKKVVSVMAPQQSERTPATTGSVKTAMTMTEK 73
Query: 75 IFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDH 134
I +RASEK QLSPG+NVWVNVD+LMTHDVCGPGS GIFK+EFG+NA VWDREKIVIIPDH
Sbjct: 74 ILARASEKSQLSPGENVWVNVDVLMTHDVCGPGSIGIFKREFGQNATVWDREKIVIIPDH 133
Query: 135 YIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPG 194
YIFT+DERANRNVDILRDFC EQN+KYFYDIKDL NFK NPDYKGVCH+ALAQEGHCRPG
Sbjct: 134 YIFTTDERANRNVDILRDFCQEQNVKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPG 193
Query: 195 EVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAK 254
EVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPTLRFV+DGEMPDYLLAK
Sbjct: 194 EVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPTLRFVMDGEMPDYLLAK 253
Query: 255 DLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFK 314
DLILQIIGEISV+GATYKSMEFVGTTVE L+MEERMTLCNMVVEAGGKNGV+P+D TTFK
Sbjct: 254 DLILQIIGEISVSGATYKSMEFVGTTVESLNMEERMTLCNMVVEAGGKNGVIPSDSTTFK 313
Query: 315 YLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVY 374
YLEDKTS+P+EPVYSDEKA FLSEYRFD+SKLEPLVAKPHSPDN ALARECKDVKIDRVY
Sbjct: 314 YLEDKTSVPFEPVYSDEKARFLSEYRFDVSKLEPLVAKPHSPDNCALARECKDVKIDRVY 373
Query: 375 IGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIF 434
IGSCTGGKTEDF+AAAKVFLASGKKVKVPTFLVPATQKVWMDVY+LPVPGSGGKTCSQIF
Sbjct: 374 IGSCTGGKTEDFMAAAKVFLASGKKVKVPTFLVPATQKVWMDVYSLPVPGSGGKTCSQIF 433
Query: 435 EEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
EEAGCDTPASPSCGACLGGPKDTYARMNEPM
Sbjct: 434 EEAGCDTPASPSCGACLGGPKDTYARMNEPM 464
>gi|296085913|emb|CBI31237.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/428 (91%), Positives = 413/428 (96%)
Query: 43 SKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHD 102
S+KIVSVMAPQQS R P+TTGSVK AMT+TEKI +RAS+KPQLSPG+NVWV+VDILMTHD
Sbjct: 40 SRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILARASQKPQLSPGENVWVDVDILMTHD 99
Query: 103 VCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYF 162
VCGPGSFGIFKKEFG+NAKVWDREKIVIIPDHYIFT+DERANRNVDILRDFC EQNIKYF
Sbjct: 100 VCGPGSFGIFKKEFGQNAKVWDREKIVIIPDHYIFTNDERANRNVDILRDFCTEQNIKYF 159
Query: 163 YDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA 222
YDIKDLGNFK NPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA
Sbjct: 160 YDIKDLGNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA 219
Query: 223 GFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE 282
GFVLGTGK+LLKVPPTLRFV+DGEMPDYLLAKDLILQIIGEISV+GATYKSMEFVG+TVE
Sbjct: 220 GFVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVGSTVE 279
Query: 283 RLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFD 342
L+MEERMTLCNMVVEAGGKNGVVPAD TT KYLEDKT +PYEPVYSDE+A FLSEYRFD
Sbjct: 280 SLTMEERMTLCNMVVEAGGKNGVVPADSTTHKYLEDKTDVPYEPVYSDEQARFLSEYRFD 339
Query: 343 ISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKV 402
+SKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF ASGKKVKV
Sbjct: 340 VSKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFHASGKKVKV 399
Query: 403 PTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
PTFLVPATQKVWMDVY+LPVPG GGKTCSQIFEEAGCDTPASPSCGACLGGP+DTYARMN
Sbjct: 400 PTFLVPATQKVWMDVYSLPVPGCGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMN 459
Query: 463 EPMASLCL 470
EP A++ +
Sbjct: 460 EPQANVIV 467
>gi|225439231|ref|XP_002271046.1| PREDICTED: 3-isopropylmalate dehydratase-like [Vitis vinifera]
Length = 508
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/422 (92%), Positives = 409/422 (96%)
Query: 43 SKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHD 102
S+KIVSVMAPQQS R P+TTGSVK AMT+TEKI +RAS+KPQLSPG+NVWV+VDILMTHD
Sbjct: 40 SRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILARASQKPQLSPGENVWVDVDILMTHD 99
Query: 103 VCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYF 162
VCGPGSFGIFKKEFG+NAKVWDREKIVIIPDHYIFT+DERANRNVDILRDFC EQNIKYF
Sbjct: 100 VCGPGSFGIFKKEFGQNAKVWDREKIVIIPDHYIFTNDERANRNVDILRDFCTEQNIKYF 159
Query: 163 YDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA 222
YDIKDLGNFK NPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA
Sbjct: 160 YDIKDLGNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA 219
Query: 223 GFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE 282
GFVLGTGK+LLKVPPTLRFV+DGEMPDYLLAKDLILQIIGEISV+GATYKSMEFVG+TVE
Sbjct: 220 GFVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVGSTVE 279
Query: 283 RLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFD 342
L+MEERMTLCNMVVEAGGKNGVVPAD TT KYLEDKT +PYEPVYSDE+A FLSEYRFD
Sbjct: 280 SLTMEERMTLCNMVVEAGGKNGVVPADSTTHKYLEDKTDVPYEPVYSDEQARFLSEYRFD 339
Query: 343 ISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKV 402
+SKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF ASGKKVKV
Sbjct: 340 VSKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFHASGKKVKV 399
Query: 403 PTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
PTFLVPATQKVWMDVY+LPVPG GGKTCSQIFEEAGCDTPASPSCGACLGGP+DTYARMN
Sbjct: 400 PTFLVPATQKVWMDVYSLPVPGCGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMN 459
Query: 463 EP 464
EP
Sbjct: 460 EP 461
>gi|224110650|ref|XP_002315591.1| predicted protein [Populus trichocarpa]
gi|222864631|gb|EEF01762.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/416 (93%), Positives = 405/416 (97%)
Query: 50 MAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSF 109
MAPQQSERRPATTGSVK A+T+TEKIF+RASEKPQL PG+NVWVNVDILMTHDVCGPGS
Sbjct: 1 MAPQQSERRPATTGSVKTALTMTEKIFARASEKPQLIPGENVWVNVDILMTHDVCGPGSI 60
Query: 110 GIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLG 169
GIFKKEFG++AKVWDREK+VIIPDHYIFT DERANRNVDILRDFC EQNIKYFYDIKDLG
Sbjct: 61 GIFKKEFGQDAKVWDREKVVIIPDHYIFTKDERANRNVDILRDFCNEQNIKYFYDIKDLG 120
Query: 170 NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTG 229
NFKANPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTG
Sbjct: 121 NFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTG 180
Query: 230 KVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEER 289
K+LLKVPPTLRFV+DGEMPDYL AKDLILQIIGEISVAGATYKSMEFVG+TVE L+MEER
Sbjct: 181 KLLLKVPPTLRFVMDGEMPDYLQAKDLILQIIGEISVAGATYKSMEFVGSTVESLTMEER 240
Query: 290 MTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPL 349
MTLCNMVVEAGGKNGVVPAD TTFKYLEDKT+LPYEPVYSD +A FLSEYRFDISKLEPL
Sbjct: 241 MTLCNMVVEAGGKNGVVPADSTTFKYLEDKTTLPYEPVYSDAQARFLSEYRFDISKLEPL 300
Query: 350 VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
VAKPHSPDNRALAREC+DVKIDRVYIGSCTGGKTEDF+A AKVFLASGKKVKVPTFLVPA
Sbjct: 301 VAKPHSPDNRALARECRDVKIDRVYIGSCTGGKTEDFMAVAKVFLASGKKVKVPTFLVPA 360
Query: 410 TQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
TQKVWMDVYTLPVPGSGGKTC+QIFEEAGCDTPASPSCGACLGGPKDT+ARMNEPM
Sbjct: 361 TQKVWMDVYTLPVPGSGGKTCAQIFEEAGCDTPASPSCGACLGGPKDTHARMNEPM 416
>gi|225433279|ref|XP_002285491.1| PREDICTED: 3-isopropylmalate dehydratase [Vitis vinifera]
gi|296083736|emb|CBI23725.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/464 (86%), Positives = 430/464 (92%), Gaps = 3/464 (0%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPA 60
MASS I+ + + +FI DL +F SS S FS+ K K S+KIVSVMAPQQS R P+
Sbjct: 1 MASSAIA-SNSPAFIKKDVDLSAF-SSSASSFSIQKTNKRN-SRKIVSVMAPQQSPRSPS 57
Query: 61 TTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA 120
T+GSVK AMT+TEKI +RASEKPQLSPG+NVWVNVD+LMTHDVCGPGSFGIFKKEFGENA
Sbjct: 58 TSGSVKTAMTMTEKILARASEKPQLSPGENVWVNVDLLMTHDVCGPGSFGIFKKEFGENA 117
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
KVWDREKIVIIP+HYIFT DERANRNVDILR+FC EQNIKYFYDIKDLGNF+ANPDYKGV
Sbjct: 118 KVWDREKIVIIPEHYIFTKDERANRNVDILREFCTEQNIKYFYDIKDLGNFRANPDYKGV 177
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA FVLGTGK+LLKVPPTLR
Sbjct: 178 CHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAAFVLGTGKILLKVPPTLR 237
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
FV+DGEMP+YLLAKDLILQIIGEISV+GATYKSMEFVGTTVE L+MEERMTLCNMV+EAG
Sbjct: 238 FVMDGEMPNYLLAKDLILQIIGEISVSGATYKSMEFVGTTVESLTMEERMTLCNMVIEAG 297
Query: 301 GKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA 360
GKNGVVPAD TT KYLEDKTSLPYEPVYSDE+A FLSEYRFDISKLEPLVAKPHSPD A
Sbjct: 298 GKNGVVPADSTTHKYLEDKTSLPYEPVYSDEQARFLSEYRFDISKLEPLVAKPHSPDKCA 357
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTL 420
LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF ASGKKVKVPTFLVPATQKVWMDVY+L
Sbjct: 358 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFHASGKKVKVPTFLVPATQKVWMDVYSL 417
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
PVPG GGKTCSQIFEEAGCDTPASP+CGAC+GGP+DTYARMNEP
Sbjct: 418 PVPGCGGKTCSQIFEEAGCDTPASPTCGACMGGPRDTYARMNEP 461
>gi|356553399|ref|XP_003545044.1| PREDICTED: 3-isopropylmalate dehydratase-like [Glycine max]
Length = 500
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/466 (84%), Positives = 430/466 (92%), Gaps = 14/466 (3%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIV--SVMAPQQSERR 58
MASS++SP+ TS F+ K DL S S F+ +C K AV +KI+ ++ APQ R+
Sbjct: 1 MASSLLSPSFTS-FLRTK-DL------SLSAFTSQRCFK-AVPRKIIRCAIAAPQ---RQ 48
Query: 59 PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE 118
P+TTGSV+ AMT+TEKI +RASEK QL+PGDNVWVNVDILMTHDVCGPGS GIFK+EFGE
Sbjct: 49 PSTTGSVRTAMTMTEKILARASEKAQLTPGDNVWVNVDILMTHDVCGPGSIGIFKREFGE 108
Query: 119 NAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYK 178
+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC EQNIKYFYDIKDL NFK NPDYK
Sbjct: 109 DAKVWDREKLVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIKDLSNFKVNPDYK 168
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
GVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPT
Sbjct: 169 GVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPT 228
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
LRFV+DGEMPDYLL+KDLILQIIGEI+VAGATYKSMEFVGTTVE L+MEERMTLCNMVVE
Sbjct: 229 LRFVMDGEMPDYLLSKDLILQIIGEITVAGATYKSMEFVGTTVESLTMEERMTLCNMVVE 288
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
AGGKNGVVPAD TTFKYLE KTSLPYEPVYSD++A FL+EYRFD+SKLEP+VAKPHSPDN
Sbjct: 289 AGGKNGVVPADSTTFKYLEGKTSLPYEPVYSDDQARFLAEYRFDVSKLEPVVAKPHSPDN 348
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
RALARECKDVKIDRVYIGSCTGGKTEDF+AAAKVFLASGK+VKVPTFLVPATQKVWMD+Y
Sbjct: 349 RALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFLASGKQVKVPTFLVPATQKVWMDLY 408
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+LPVPGSGGKTCSQIFEE GCDTPASPSCGACLGGPKDTYARMNEP
Sbjct: 409 SLPVPGSGGKTCSQIFEEVGCDTPASPSCGACLGGPKDTYARMNEP 454
>gi|356562389|ref|XP_003549454.1| PREDICTED: 3-isopropylmalate dehydratase-like [Glycine max]
Length = 502
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/466 (84%), Positives = 431/466 (92%), Gaps = 13/466 (2%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIV--SVMAPQQSERR 58
MASS++SP+ TS F KKD+ S S F+ +C K A+ ++I+ +V APQ R+
Sbjct: 1 MASSLLSPSFTS-FPRIKKDV------SLSAFTSQRCFK-ALPRRIIRCAVAAPQ---RQ 49
Query: 59 PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE 118
P+TTGSV+ AMT+TEKI +RASEK QL+PGDNVWVNVDILMTHDVCGPGS GIFK+EFG+
Sbjct: 50 PSTTGSVRTAMTMTEKILARASEKVQLTPGDNVWVNVDILMTHDVCGPGSIGIFKREFGD 109
Query: 119 NAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYK 178
+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC EQNIKYFYDIKDL NFK NPDYK
Sbjct: 110 DAKVWDREKLVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIKDLSNFKVNPDYK 169
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
GVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPT
Sbjct: 170 GVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPT 229
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
LRFV+DGEMPDYLL+KDLILQIIGEI+VAGATYKSMEFVGTTVE L+MEERMTLCNMVVE
Sbjct: 230 LRFVMDGEMPDYLLSKDLILQIIGEITVAGATYKSMEFVGTTVESLTMEERMTLCNMVVE 289
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
AGGKNGVVPAD TTFKYLE KTSLPYEPVYSD++A FL+EYRFD+SKLEP+VAKPHSPDN
Sbjct: 290 AGGKNGVVPADSTTFKYLEGKTSLPYEPVYSDDQARFLAEYRFDVSKLEPVVAKPHSPDN 349
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
RALARECKDVKIDRVYIGSCTGGKTEDF+AAAKVFLASGK+VKVPTFLVPATQKVWMD+Y
Sbjct: 350 RALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFLASGKQVKVPTFLVPATQKVWMDLY 409
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP
Sbjct: 410 SLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 455
>gi|357439825|ref|XP_003590190.1| 3-isopropylmalate dehydratase [Medicago truncatula]
gi|355479238|gb|AES60441.1| 3-isopropylmalate dehydratase [Medicago truncatula]
Length = 505
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/464 (83%), Positives = 426/464 (91%), Gaps = 6/464 (1%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPA 60
MASS++ P++SF + KKDL S+ S S +C K A + SV APQQ++R+P+
Sbjct: 1 MASSLV---PSTSFFHTKKDLSL---SAFSSPSSQRCHKHASKRITCSVAAPQQTQRQPS 54
Query: 61 TTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA 120
+TGSVK AMT+TEKI ++ASEK ++PGDN+WV+VD+LMTHDVCGPGS GIFKKEFG++A
Sbjct: 55 STGSVKTAMTMTEKIMAKASEKGHVTPGDNIWVDVDVLMTHDVCGPGSIGIFKKEFGQDA 114
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
KVWDREK+VIIPDHYIFTSDERANRNVDILRDFC EQ+IKYFYDIKDL NFK NPDYKGV
Sbjct: 115 KVWDREKVVIIPDHYIFTSDERANRNVDILRDFCHEQDIKYFYDIKDLSNFKVNPDYKGV 174
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLG GK+LLKVPPTLR
Sbjct: 175 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLKVPPTLR 234
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
FV+DGEMP+YLLAKDLILQIIGEISVAGATYKSMEFVG+TVE L+MEERMTLCNMVVEAG
Sbjct: 235 FVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGSTVESLNMEERMTLCNMVVEAG 294
Query: 301 GKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA 360
GKNGV+P D T+KYLE KTS+PYEPVYSD++A FLSEYRFD+SKLEPLVAKPHSPDNRA
Sbjct: 295 GKNGVIPPDSITYKYLEGKTSVPYEPVYSDQQARFLSEYRFDVSKLEPLVAKPHSPDNRA 354
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTL 420
LARECKDVKI+RVYIGSCTGGKTEDF+AAAKVFLASGKKVKVPTFLVPATQKVWMDVY+L
Sbjct: 355 LARECKDVKINRVYIGSCTGGKTEDFMAAAKVFLASGKKVKVPTFLVPATQKVWMDVYSL 414
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP
Sbjct: 415 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 458
>gi|449461279|ref|XP_004148369.1| PREDICTED: 3-isopropylmalate dehydratase-like [Cucumis sativus]
gi|449505250|ref|XP_004162416.1| PREDICTED: 3-isopropylmalate dehydratase-like [Cucumis sativus]
Length = 510
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/457 (82%), Positives = 421/457 (92%), Gaps = 3/457 (0%)
Query: 14 FINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTE 73
F+ NKKDL FSS+ FS +C++ VSKKI SVM PQQSER+P+ +GSVK AMT+TE
Sbjct: 14 FLTNKKDLDVAAFSSSLPFSYRRCER-TVSKKICSVMTPQQSERKPSASGSVKTAMTMTE 72
Query: 74 KIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPD 133
KIF++AS+K +LSPG+NVWV+VD+LMTHDVCGPGS GIFKKEFGENAKVWDREK+VIIPD
Sbjct: 73 KIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVWDREKVVIIPD 132
Query: 134 HYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRP 193
HYIFTSDERANRNVDILRDF EQNIKYFYDIKDL +F+ NPDYKGVCH+ALAQEGHCRP
Sbjct: 133 HYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQEGHCRP 192
Query: 194 GEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLA 253
GEVLLGTDSHTCTAGAFGQFA+GIGNTDAGF+LGTGK LLKVPPTLRFV+DGEMPDYLLA
Sbjct: 193 GEVLLGTDSHTCTAGAFGQFASGIGNTDAGFILGTGKSLLKVPPTLRFVMDGEMPDYLLA 252
Query: 254 KDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTF 313
KDLILQIIGEISV+GATYK+MEF+GTT+E L+MEERMTLCNMVVEAGGKNGV+P D TTF
Sbjct: 253 KDLILQIIGEISVSGATYKAMEFIGTTIESLTMEERMTLCNMVVEAGGKNGVIPPDSTTF 312
Query: 314 KYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRV 373
KYLEDKT+ P+EPVYSD A FLSEYRFD+SKLEP+VAKPHSPDNRALARECKDVKIDRV
Sbjct: 313 KYLEDKTTKPFEPVYSDANARFLSEYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRV 372
Query: 374 YIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQI 433
Y+GSCTGGKTEDFLA AKVF A+GKKVKVPTF+VPATQKVWMD+Y++PVPG+GGKTCSQI
Sbjct: 373 YVGSCTGGKTEDFLALAKVFHAAGKKVKVPTFIVPATQKVWMDLYSIPVPGAGGKTCSQI 432
Query: 434 FEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCL 470
FEEAGCDTPASP C ACLGGP+DTYARMNE A +C+
Sbjct: 433 FEEAGCDTPASPGCAACLGGPRDTYARMNE--AQVCV 467
>gi|18414006|ref|NP_567405.1| 3-isopropylmalate dehydratase [Arabidopsis thaliana]
gi|75249794|sp|Q94AR8.1|LEUC_ARATH RecName: Full=3-isopropylmalate dehydratase; AltName:
Full=Isopropylmalate isomerase large subunit 1;
Short=AtIIL1; Flags: Precursor
gi|15027971|gb|AAK76516.1| unknown protein [Arabidopsis thaliana]
gi|21436051|gb|AAM51226.1| unknown protein [Arabidopsis thaliana]
gi|332657878|gb|AEE83278.1| 3-isopropylmalate dehydratase [Arabidopsis thaliana]
Length = 509
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/462 (80%), Positives = 421/462 (91%), Gaps = 1/462 (0%)
Query: 3 SSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATT 62
+SVIS +P ++K DLG F +SQ S+++C+K ++S+KIVSVMAPQ+ +R P TT
Sbjct: 2 ASVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTT 60
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
GSVK MT+TEKI +RASEK + PGDN+WVNVD+LMTHDVCGPG+FGIFK+EFGE AKV
Sbjct: 61 GSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKV 120
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
WD EKIV+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DLGNFKANPDYKGVCH
Sbjct: 121 WDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCH 180
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPT+RF+
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPPTMRFI 240
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
LDGEMP YL AKDLILQIIGEISVAGATYK+MEF GTT+E LSMEERMTLCNMVVEAGGK
Sbjct: 241 LDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVVEAGGK 300
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NGV+P D TT Y+E++TS+P+EPVYSD ASF+++YRFD+SKLEP+VAKPHSPDNRALA
Sbjct: 301 NGVIPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALA 360
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
RECKDVKIDRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDVY LPV
Sbjct: 361 RECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPV 420
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
PG+GGKTC+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP
Sbjct: 421 PGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEP 462
>gi|297790488|ref|XP_002863129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308963|gb|EFH39388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 508
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/467 (79%), Positives = 422/467 (90%), Gaps = 12/467 (2%)
Query: 2 ASSVISPAPTSSFI----NNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSER 57
ASSVIS +S+F+ ++KKDLG F +SQ S+++C++ K IVSVMAPQ+ +R
Sbjct: 3 ASSVIS---SSTFLCKSSSSKKDLGISSFPKSSQISIHRCQR----KSIVSVMAPQK-DR 54
Query: 58 RPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG 117
P TTGSVK MT+TEKI +RASEK + PGDN+WVNVD+LMTHDVCGPG+FGIFK+EFG
Sbjct: 55 SPGTTGSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFG 114
Query: 118 ENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY 177
+ AKVWD EKIV+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DLGNFKANPDY
Sbjct: 115 DKAKVWDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDY 174
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
KGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPP
Sbjct: 175 KGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPP 234
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
T+RF+LDGEMP YL AKDLILQIIGEISVAGATYK+MEF GTT+E LSMEERMTLCNMVV
Sbjct: 235 TMRFILDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVV 294
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
EAGGKNGV+P D TT Y+E++TS+P+EPVYSD ASF+++YRFD+SKLEP+VAKPHSPD
Sbjct: 295 EAGGKNGVIPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPD 354
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV 417
NRALARECKDVKIDRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDV
Sbjct: 355 NRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDV 414
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
Y LPVPGSGGKTC+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP
Sbjct: 415 YALPVPGSGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEP 461
>gi|115443927|ref|NP_001045743.1| Os02g0125100 [Oryza sativa Japonica Group]
gi|41053038|dbj|BAD07969.1| putative 3-isopropylmalate dehydratase large subunit [Oryza sativa
Japonica Group]
gi|113535274|dbj|BAF07657.1| Os02g0125100 [Oryza sativa Japonica Group]
gi|215678837|dbj|BAG95274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189963|gb|EEC72390.1| hypothetical protein OsI_05669 [Oryza sativa Indica Group]
gi|222622087|gb|EEE56219.1| hypothetical protein OsJ_05201 [Oryza sativa Japonica Group]
Length = 514
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/468 (79%), Positives = 418/468 (89%), Gaps = 3/468 (0%)
Query: 1 MAS-SVISP-APTSSFINNKKDLGSFCFS-STSQFSVNKCKKLAVSKKIVSVMAPQQSER 57
MAS S SP A ++ +K +L + + S Q + A S ++ +V P ++ R
Sbjct: 1 MASISAASPVAGKAAAFAHKNELAAAAVAPSQQQLQRRVSGRRARSGRVRAVATPARAPR 60
Query: 58 RPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG 117
P++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LMTHDVCGPG+ GIFK+EFG
Sbjct: 61 APSSTGSVKSAMTMTEKILARASERASLEPGENVWVDVDVLMTHDVCGPGTIGIFKREFG 120
Query: 118 ENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY 177
E+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDL NFKANPDY
Sbjct: 121 EDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLSNFKANPDY 180
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
KGVCH+ALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGFV+GTGK LLKVPP
Sbjct: 181 KGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKALLKVPP 240
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
T+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L+MEERMTLCNMV+
Sbjct: 241 TIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLNMEERMTLCNMVI 300
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
EAGGKNGVVPAD TTF YLE KTS+ YEPVYSD +A F+S+YRFD+SKLEP++AKPHSPD
Sbjct: 301 EAGGKNGVVPADQTTFNYLEGKTSVEYEPVYSDAQARFVSDYRFDVSKLEPVIAKPHSPD 360
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV 417
NRALARECKDVKIDRVYIGSCTGGKTEDF AAAKVFLASGKKVKVPTFLVPATQKVWMD+
Sbjct: 361 NRALARECKDVKIDRVYIGSCTGGKTEDFFAAAKVFLASGKKVKVPTFLVPATQKVWMDI 420
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
Y++PVPG+GGKTCSQIFEEAGCDTPASPSCGACLGGP+DTYARMNEPM
Sbjct: 421 YSIPVPGAGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEPM 468
>gi|242063896|ref|XP_002453237.1| hypothetical protein SORBIDRAFT_04g002120 [Sorghum bicolor]
gi|241933068|gb|EES06213.1| hypothetical protein SORBIDRAFT_04g002120 [Sorghum bicolor]
Length = 507
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/421 (86%), Positives = 400/421 (95%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ +V +P ++ R P++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LMTHDVC
Sbjct: 41 RVRAVASPARAPRAPSSTGSVKSAMTMTEKILARASERAALEPGENVWVDVDVLMTHDVC 100
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+ GIFKKEFGE+AKVWDREK+VIIPDHYIFT+DERANRNVDILRDFC+EQNIKYFYD
Sbjct: 101 GPGTIGIFKKEFGEDAKVWDREKVVIIPDHYIFTTDERANRNVDILRDFCLEQNIKYFYD 160
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKDL NFKANPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGF
Sbjct: 161 IKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGF 220
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
VLGTGK LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L
Sbjct: 221 VLGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESL 280
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+YRFD+S
Sbjct: 281 TMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDYRFDVS 340
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VAKPHSPDNRALARECKDVK+DRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT
Sbjct: 341 KLEPVVAKPHSPDNRALARECKDVKVDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 400
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
FLVPATQKVWMDVY+LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP+DTYARMNEP
Sbjct: 401 FLVPATQKVWMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEP 460
Query: 465 M 465
M
Sbjct: 461 M 461
>gi|4584548|emb|CAB40778.1| putative protein [Arabidopsis thaliana]
gi|7268046|emb|CAB78385.1| putative protein [Arabidopsis thaliana]
Length = 509
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/462 (79%), Positives = 414/462 (89%), Gaps = 1/462 (0%)
Query: 3 SSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATT 62
+SVIS +P ++K DLG F +SQ S+++C+K ++S+KIVSVMAPQ+ +R P TT
Sbjct: 2 ASVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTT 60
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
GSVK MT+TEKI +RASEK + PGDN+WVNVD+LMTHDVCGPG+FGIFK+EFGE AKV
Sbjct: 61 GSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKV 120
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
WD EKIV+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DLGNFKANPDYKGVCH
Sbjct: 121 WDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCH 180
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPT+RF+
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPPTMRFI 240
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
LDGEMP YL AKDLILQIIGEISVAGATYK+MEF GTT+E LSMEERMTLCNMVVEAGGK
Sbjct: 241 LDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVVEAGGK 300
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NGV+P D TT Y+E + PVYSD ASF+++YRFD+SKLEP+VAKPHSPDNRALA
Sbjct: 301 NGVIPPDATTLNYVEACILSCFLPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALA 360
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
RECKDVKIDRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDVY LPV
Sbjct: 361 RECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPV 420
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
PG+GGKTC+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP
Sbjct: 421 PGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEP 462
>gi|226493349|ref|NP_001151269.1| 3-isopropylmalate dehydratase large subunit 2 [Zea mays]
gi|195645422|gb|ACG42179.1| 3-isopropylmalate dehydratase large subunit 2 [Zea mays]
Length = 492
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/420 (85%), Positives = 398/420 (94%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ +V +P ++ R P++TGSVK AMT+TEKI +RASE+ L PG+NVWV++D+LMTHDVC
Sbjct: 39 RVRAVASPARTPRAPSSTGSVKTAMTMTEKILARASERAALEPGENVWVDIDVLMTHDVC 98
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+ GIFKKEFGE+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC+EQNIKYFYD
Sbjct: 99 GPGTIGIFKKEFGEDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCLEQNIKYFYD 158
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGF
Sbjct: 159 IKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGF 218
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
V+GTGK LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L
Sbjct: 219 VMGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESL 278
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMTLCNMVVEAGGKNGVVPAD TTFKYLE +TS+ Y+PVYSD +A F S+YRFD+S
Sbjct: 279 TMEERMTLCNMVVEAGGKNGVVPADETTFKYLEGRTSVDYQPVYSDAEARFFSDYRFDVS 338
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT
Sbjct: 339 KLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 398
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
FLVPATQKVWMDVY+LPVPGSGGKTC+QIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 399 FLVPATQKVWMDVYSLPVPGSGGKTCAQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 458
>gi|238014964|gb|ACR38517.1| unknown [Zea mays]
gi|413935380|gb|AFW69931.1| 3-isopropylmalate dehydratase large subunit 2 isoform 1 [Zea mays]
gi|413935381|gb|AFW69932.1| 3-isopropylmalate dehydratase large subunit 2 isoform 2 [Zea mays]
Length = 505
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/420 (85%), Positives = 398/420 (94%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ +V +P ++ R P++TGSVK AMT+TEKI +RASE+ L PG+NVWV++D+LMTHDVC
Sbjct: 39 RVRAVASPARTPRAPSSTGSVKTAMTMTEKILARASERAALEPGENVWVDIDVLMTHDVC 98
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+ GIFKKEFGE+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC+EQNIKYFYD
Sbjct: 99 GPGTIGIFKKEFGEDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCLEQNIKYFYD 158
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGF
Sbjct: 159 IKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGF 218
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
V+GTGK LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L
Sbjct: 219 VMGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESL 278
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMTLCNMVVEAGGKNGVVPAD TTFKYLE +TS+ Y+PVYSD +A F S+YRFD+S
Sbjct: 279 TMEERMTLCNMVVEAGGKNGVVPADETTFKYLEGRTSVDYQPVYSDAEARFFSDYRFDVS 338
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT
Sbjct: 339 KLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 398
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
FLVPATQKVWMDVY+LPVPGSGGKTC+QIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 399 FLVPATQKVWMDVYSLPVPGSGGKTCAQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 458
>gi|413935382|gb|AFW69933.1| hypothetical protein ZEAMMB73_705624 [Zea mays]
Length = 505
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/420 (85%), Positives = 398/420 (94%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ +V +P ++ R P++TGSVK AMT+TEKI +RASE+ L PG+NVWV++D+LMTHDVC
Sbjct: 39 RVRAVASPARTPRAPSSTGSVKTAMTMTEKILARASERAALEPGENVWVDIDVLMTHDVC 98
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+ GIFKKEFGE+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC+EQNIKYFYD
Sbjct: 99 GPGTIGIFKKEFGEDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCLEQNIKYFYD 158
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGF
Sbjct: 159 IKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGF 218
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
V+GTGK LL+VPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L
Sbjct: 219 VMGTGKALLQVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESL 278
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMTLCNMVVEAGGKNGVVPAD TTFKYLE +TS+ Y+PVYSD +A F S+YRFD+S
Sbjct: 279 TMEERMTLCNMVVEAGGKNGVVPADETTFKYLEGRTSVDYQPVYSDAEARFFSDYRFDVS 338
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT
Sbjct: 339 KLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 398
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
FLVPATQKVWMDVY+LPVPGSGGKTC+QIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 399 FLVPATQKVWMDVYSLPVPGSGGKTCAQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 458
>gi|238006740|gb|ACR34405.1| unknown [Zea mays]
Length = 505
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/420 (85%), Positives = 397/420 (94%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ +V +P ++ R P++TGSVK AMT+TEKI +RASE+ L PG+NVWV++D+LMTHDVC
Sbjct: 39 RVRAVASPARTPRAPSSTGSVKTAMTMTEKILARASERAALEPGENVWVDIDVLMTHDVC 98
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+ GIFKKEFGE+AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC+EQNIKYFYD
Sbjct: 99 GPGTIGIFKKEFGEDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCLEQNIKYFYD 158
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGF
Sbjct: 159 IKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGF 218
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
V+GTGK LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L
Sbjct: 219 VMGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESL 278
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMTLCNMVVEAGGKNGVVPAD TTFKYLE +TS+ Y+PVYSD +A F S+YRFD+S
Sbjct: 279 TMEERMTLCNMVVEAGGKNGVVPADETTFKYLEGRTSVDYQPVYSDAEARFFSDYRFDVS 338
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAA KVFLASGKKVKVPT
Sbjct: 339 KLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAVKVFLASGKKVKVPT 398
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
FLVPATQKVWMDVY+LPVPGSGGKTC+QIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 399 FLVPATQKVWMDVYSLPVPGSGGKTCAQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 458
>gi|326505500|dbj|BAJ95421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/419 (85%), Positives = 393/419 (93%)
Query: 46 IVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCG 105
+ +V P ++ R PA+TGSVK+ MT TEKI +RASE+ L PG+NVWV+VD+LMTHDVCG
Sbjct: 46 VRAVATPTRAPRSPASTGSVKSPMTTTEKILARASERASLEPGENVWVDVDVLMTHDVCG 105
Query: 106 PGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDI 165
PG+ GIFK+EFGE+AKVWDREK+VIIPDHYIFT+DERANRNVDILRDFC EQ IKYFYDI
Sbjct: 106 PGTIGIFKQEFGEDAKVWDREKVVIIPDHYIFTADERANRNVDILRDFCQEQKIKYFYDI 165
Query: 166 KDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFV 225
KDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGFV
Sbjct: 166 KDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFV 225
Query: 226 LGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLS 285
+GTGK LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATY+SMEFVG+T+E L+
Sbjct: 226 MGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYRSMEFVGSTIESLT 285
Query: 286 MEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISK 345
MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+YRFD+SK
Sbjct: 286 MEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVEYEPVYSDAQARFYSDYRFDVSK 345
Query: 346 LEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
LEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF+AAAKVFLASGKKVKVPTF
Sbjct: 346 LEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFIAAAKVFLASGKKVKVPTF 405
Query: 406 LVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
LVPATQKVWMDVY+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 406 LVPATQKVWMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 464
>gi|357145960|ref|XP_003573828.1| PREDICTED: 3-isopropylmalate dehydratase-like [Brachypodium
distachyon]
Length = 516
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/413 (86%), Positives = 390/413 (94%)
Query: 52 PQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGI 111
P ++ R PA+TGSVK MT TEKI +RASE+ +L PG+NVWV+VD+LMTHDVCGPG+ GI
Sbjct: 57 PARAPRAPASTGSVKAPMTTTEKILARASERARLEPGENVWVDVDVLMTHDVCGPGTIGI 116
Query: 112 FKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNF 171
FK+EFG++AKVWDREK+VIIPDHYIFTSDERANRNVDILRDFC EQ IKYFYDI+DL +F
Sbjct: 117 FKQEFGDDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCTEQEIKYFYDIRDLSDF 176
Query: 172 KANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKV 231
+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGNTDAGFV+GTGK
Sbjct: 177 RANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKA 236
Query: 232 LLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMT 291
LLKVPPT+RFVLDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+TVE L+MEERMT
Sbjct: 237 LLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLTMEERMT 296
Query: 292 LCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVA 351
LCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+YRFD+SKLEP+VA
Sbjct: 297 LCNMVIEAGGKNGVVPADKTTFKYLEGKTSVEYEPVYSDAQARFFSDYRFDVSKLEPVVA 356
Query: 352 KPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQ 411
KPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQ
Sbjct: 357 KPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQ 416
Query: 412 KVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
KVWMDVY+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYARMNEP
Sbjct: 417 KVWMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYARMNEP 469
>gi|255574877|ref|XP_002528345.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
gi|223532213|gb|EEF34017.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
Length = 621
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/468 (80%), Positives = 409/468 (87%), Gaps = 32/468 (6%)
Query: 1 MASSVISPAPTSSFINNK-KDLGSFCFSSTSQ-FSVNKCKKLAVSKKIVSVMAPQQSERR 58
MAS+ +P P SSFI NK KDLG SS S V KCKK ++ K+IV+V++PQQSER+
Sbjct: 137 MAST--TPVPASSFIINKQKDLGLSRLSSPSPSVYVLKCKK-SIFKRIVAVVSPQQSERK 193
Query: 59 PATTGSV-KNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG 117
PATTGSV KNAMT TEKI +RASEKPQL PG+NVWVNVDILMTHDVCGPGSF IFK+EFG
Sbjct: 194 PATTGSVVKNAMTTTEKILARASEKPQLGPGENVWVNVDILMTHDVCGPGSFAIFKREFG 253
Query: 118 ENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY 177
ENAKVWD EK+V+IPDHYIFT+D+ ANRNVDILR+FC+EQNIK+FYDIKD+ NFKAN DY
Sbjct: 254 ENAKVWDHEKVVVIPDHYIFTADKLANRNVDILREFCLEQNIKHFYDIKDISNFKANSDY 313
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG TDAGFVLGTGK+LLKVPP
Sbjct: 314 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGITDAGFVLGTGKLLLKVPP 373
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
TLRFV+DGEMPDYLLAKDLILQ MEERMTLCNMV+
Sbjct: 374 TLRFVIDGEMPDYLLAKDLILQ--------------------------MEERMTLCNMVI 407
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
EAGGKNGV+PAD TTFKYLEDKTS+PYEPVYSDE+A FLSEYRFDISKLEPLVAKPHSPD
Sbjct: 408 EAGGKNGVIPADSTTFKYLEDKTSVPYEPVYSDEQARFLSEYRFDISKLEPLVAKPHSPD 467
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV 417
NRALARECKDVKIDRVYIGSCTGGKTEDF AAAKVFLASGKKVKVPTFLVPATQKVWMDV
Sbjct: 468 NRALARECKDVKIDRVYIGSCTGGKTEDFTAAAKVFLASGKKVKVPTFLVPATQKVWMDV 527
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
Y++PVPGSGGKTCS+IFEEAGCDTPASP C AC+GGP+DTYARMNEPM
Sbjct: 528 YSIPVPGSGGKTCSRIFEEAGCDTPASPGCSACMGGPRDTYARMNEPM 575
>gi|195651203|gb|ACG45069.1| 3-isopropylmalate dehydratase large subunit 2 [Zea mays]
Length = 504
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/425 (84%), Positives = 393/425 (92%)
Query: 40 LAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILM 99
L K SV A R ++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LM
Sbjct: 33 LTRRTKPCSVRAVASPARALSSTGSVKSAMTMTEKILARASERAALEPGENVWVDVDVLM 92
Query: 100 THDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNI 159
THDVCGPG+F IFKKEFGE+A+VWDREK+V+IPDHYIFTSD+RANRNVDILRDFC EQNI
Sbjct: 93 THDVCGPGAFDIFKKEFGEDARVWDREKLVVIPDHYIFTSDDRANRNVDILRDFCAEQNI 152
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
KYFYDIKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGN
Sbjct: 153 KYFYDIKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGN 212
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
TDAGFVLGTGK LLKVPPT+RF+LDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+
Sbjct: 213 TDAGFVLGTGKALLKVPPTIRFILDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGS 272
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEY 339
TVE L+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+Y
Sbjct: 273 TVESLTMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDY 332
Query: 340 RFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 399
RFD+SKLEP+VAKPHSPDNRA ARECKDVKIDRVYIGSCTGGKTEDFLAAAK+FLASGKK
Sbjct: 333 RFDVSKLEPVVAKPHSPDNRAPARECKDVKIDRVYIGSCTGGKTEDFLAAAKLFLASGKK 392
Query: 400 VKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
VKVPTFLVPATQKVW+DVY+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYA
Sbjct: 393 VKVPTFLVPATQKVWLDVYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYA 452
Query: 460 RMNEP 464
RMNEP
Sbjct: 453 RMNEP 457
>gi|413926721|gb|AFW66653.1| hypothetical protein ZEAMMB73_684541 [Zea mays]
Length = 502
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/425 (84%), Positives = 391/425 (92%)
Query: 40 LAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILM 99
L K SV A R ++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LM
Sbjct: 31 LTRRTKPCSVRAVASPARALSSTGSVKSAMTMTEKILARASERAALEPGENVWVDVDVLM 90
Query: 100 THDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNI 159
THDVCGPG+F IFKKEFGE+A+VWDREK+V+IPDHYIFTSD RA RNVDILRDFC EQNI
Sbjct: 91 THDVCGPGAFDIFKKEFGEDARVWDREKLVVIPDHYIFTSDGRAKRNVDILRDFCAEQNI 150
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
KYFYDIKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGN
Sbjct: 151 KYFYDIKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGN 210
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
TDAGFVLGTGK LLKVPPT+RF+LDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+
Sbjct: 211 TDAGFVLGTGKALLKVPPTIRFILDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGS 270
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEY 339
TVE L+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+Y
Sbjct: 271 TVESLTMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDY 330
Query: 340 RFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 399
RFD+SKLEP+VAKPHSPDNRA ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK
Sbjct: 331 RFDVSKLEPVVAKPHSPDNRAPARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 390
Query: 400 VKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
VKVPTFLVPATQKVW+D+Y+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYA
Sbjct: 391 VKVPTFLVPATQKVWLDIYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYA 450
Query: 460 RMNEP 464
RMNEP
Sbjct: 451 RMNEP 455
>gi|212723504|ref|NP_001132276.1| uncharacterized protein LOC100193712 [Zea mays]
gi|194693940|gb|ACF81054.1| unknown [Zea mays]
gi|413926722|gb|AFW66654.1| hypothetical protein ZEAMMB73_684541 [Zea mays]
Length = 505
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/425 (84%), Positives = 391/425 (92%)
Query: 40 LAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILM 99
L K SV A R ++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LM
Sbjct: 34 LTRRTKPCSVRAVASPARALSSTGSVKSAMTMTEKILARASERAALEPGENVWVDVDVLM 93
Query: 100 THDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNI 159
THDVCGPG+F IFKKEFGE+A+VWDREK+V+IPDHYIFTSD RA RNVDILRDFC EQNI
Sbjct: 94 THDVCGPGAFDIFKKEFGEDARVWDREKLVVIPDHYIFTSDGRAKRNVDILRDFCAEQNI 153
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
KYFYDIKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGN
Sbjct: 154 KYFYDIKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGN 213
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
TDAGFVLGTGK LLKVPPT+RF+LDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+
Sbjct: 214 TDAGFVLGTGKALLKVPPTIRFILDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGS 273
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEY 339
TVE L+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+Y
Sbjct: 274 TVESLTMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDY 333
Query: 340 RFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 399
RFD+SKLEP+VAKPHSPDNRA ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK
Sbjct: 334 RFDVSKLEPVVAKPHSPDNRAPARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 393
Query: 400 VKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
VKVPTFLVPATQKVW+D+Y+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYA
Sbjct: 394 VKVPTFLVPATQKVWLDIYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYA 453
Query: 460 RMNEP 464
RMNEP
Sbjct: 454 RMNEP 458
>gi|413926723|gb|AFW66655.1| 3-isopropylmalate dehydratase large subunit 2 [Zea mays]
Length = 504
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/425 (84%), Positives = 391/425 (92%)
Query: 40 LAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILM 99
L K SV A R ++TGSVK+AMT+TEKI +RASE+ L PG+NVWV+VD+LM
Sbjct: 33 LTRRTKPCSVRAVASPARALSSTGSVKSAMTMTEKILARASERAALEPGENVWVDVDVLM 92
Query: 100 THDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNI 159
THDVCGPG+F IFKKEFGE+A+VWDREK+V+IPDHYIFTSD RA RNVDILRDFC EQNI
Sbjct: 93 THDVCGPGAFDIFKKEFGEDARVWDREKLVVIPDHYIFTSDGRAKRNVDILRDFCAEQNI 152
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
KYFYDIKDL +F+ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC AGAFGQFATGIGN
Sbjct: 153 KYFYDIKDLSDFRANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGN 212
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
TDAGFVLGTGK LLKVPPT+RF+LDGEMP YLLAKDLILQIIGEISV+GATYKSMEFVG+
Sbjct: 213 TDAGFVLGTGKALLKVPPTIRFILDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGS 272
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEY 339
TVE L+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A F S+Y
Sbjct: 273 TVESLTMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDY 332
Query: 340 RFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 399
RFD+SKLEP+VAKPHSPDNRA ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK
Sbjct: 333 RFDVSKLEPVVAKPHSPDNRAPARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 392
Query: 400 VKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
VKVPTFLVPATQKVW+D+Y+LPVPGSGGKTCSQIFEEAGCDTPASP+CGACLGGP+DTYA
Sbjct: 393 VKVPTFLVPATQKVWLDIYSLPVPGSGGKTCSQIFEEAGCDTPASPNCGACLGGPRDTYA 452
Query: 460 RMNEP 464
RMNEP
Sbjct: 453 RMNEP 457
>gi|224102245|ref|XP_002312607.1| predicted protein [Populus trichocarpa]
gi|222852427|gb|EEE89974.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/397 (88%), Positives = 384/397 (96%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKIF+RASE+PQ+SPG+NVWVNVD+LMTHD+ GPGS GIFK+EFG +AKVWDREK+
Sbjct: 1 MTMTEKIFARASEEPQVSPGENVWVNVDVLMTHDISGPGSIGIFKREFGPDAKVWDREKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT D+ ANRNVDILRDFC +Q+IKYFYDIKDLGN+KANPDYKGVCH+ALAQE
Sbjct: 61 VVIPDHYIFTEDKLANRNVDILRDFCNDQDIKYFYDIKDLGNYKANPDYKGVCHVALAQE 120
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPTL+FV+DGEMP
Sbjct: 121 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPTLKFVMDGEMP 180
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
DYLLAKDLILQIIGEISVAGATYKSMEF GTTVE L+MEERMTLCNMV+EAGGKNGVVP
Sbjct: 181 DYLLAKDLILQIIGEISVAGATYKSMEFAGTTVESLTMEERMTLCNMVIEAGGKNGVVPP 240
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTFKYLEDKTSLPYEPVYSD +A FL+EYRFD++KLEPLVAKPHSPDNRALARECKDV
Sbjct: 241 DSTTFKYLEDKTSLPYEPVYSDAQARFLTEYRFDVTKLEPLVAKPHSPDNRALARECKDV 300
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKTEDF+AAAKVFLASGKKV+VPTFLVPAT KVWMD+YTLPVPGSGGK
Sbjct: 301 KIDRVYIGSCTGGKTEDFMAAAKVFLASGKKVRVPTFLVPATGKVWMDLYTLPVPGSGGK 360
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
TCSQIFEEAGCDTPA+P+CGAC+GGP+DTYARMN+P+
Sbjct: 361 TCSQIFEEAGCDTPANPTCGACMGGPRDTYARMNKPV 397
>gi|168050793|ref|XP_001777842.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670818|gb|EDQ57380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 518
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/472 (75%), Positives = 403/472 (85%), Gaps = 8/472 (1%)
Query: 1 MASSVISPAP---TSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSK-----KIVSVMAP 52
MA++ +S A SS + + L S + SV K +V+ ++ +VMAP
Sbjct: 1 MATTAVSVAHHPGISSALRDGASLASGSGFYGVRVSVAAAPKTSVASAHRDMRVRAVMAP 60
Query: 53 QQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIF 112
Q+ ER PA+TG+VK AMT TEKI + ASEK +L+PG+NVWV D+LMTHDVCGPG+ GIF
Sbjct: 61 QKQERSPASTGAVKQAMTATEKILANASEKTKLAPGENVWVKADVLMTHDVCGPGTIGIF 120
Query: 113 KKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFK 172
KKEFG+NAKVWDREKIV+IPDHYIFTSDERANRNVDILRDF EQ+IKYFYDI D NF+
Sbjct: 121 KKEFGQNAKVWDREKIVLIPDHYIFTSDERANRNVDILRDFAREQDIKYFYDITDRSNFR 180
Query: 173 ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVL 232
ANPDYKGVCH+ALAQEGHCRPGEVL GTDSHTC AGAFGQFATGIGNTDAGF++GTGK+L
Sbjct: 181 ANPDYKGVCHVALAQEGHCRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLL 240
Query: 233 LKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTL 292
+KVPPTLRFVLDGEMP YLLAKDLILQIIGEISVAGATY++MEFVGT V+ ++ME+RMTL
Sbjct: 241 IKVPPTLRFVLDGEMPKYLLAKDLILQIIGEISVAGATYRAMEFVGTAVDAMTMEDRMTL 300
Query: 293 CNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAK 352
CNMVVEAGGKNGVVPAD TT KYLE KTS PY+ SD ASFL EYRFD+SKLEPLVAK
Sbjct: 301 CNMVVEAGGKNGVVPADATTAKYLEGKTSKPYQVFTSDGNASFLQEYRFDVSKLEPLVAK 360
Query: 353 PHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQK 412
PHSPDNR LARECKDVKIDRVYIGSCTGGKTEDFLAAA++ SG+KVKVPTFLVPATQK
Sbjct: 361 PHSPDNRGLARECKDVKIDRVYIGSCTGGKTEDFLAAAELLAISGQKVKVPTFLVPATQK 420
Query: 413 VWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
VWMD+Y+LPVPG+ GKTC++IF++AGCDTPASPSC ACLGGP+DTYARMN+P
Sbjct: 421 VWMDLYSLPVPGTDGKTCAEIFQQAGCDTPASPSCAACLGGPRDTYARMNDP 472
>gi|302801329|ref|XP_002982421.1| hypothetical protein SELMODRAFT_268577 [Selaginella moellendorffii]
gi|300150013|gb|EFJ16666.1| hypothetical protein SELMODRAFT_268577 [Selaginella moellendorffii]
Length = 489
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/436 (78%), Positives = 387/436 (88%)
Query: 29 TSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPG 88
+S FSVN S I +VMAP Q +R PA+TG+VK+AMTLTEKI +RASEK +L PG
Sbjct: 8 SSYFSVNARPMSRRSSTISAVMAPPQQQRPPASTGAVKHAMTLTEKILARASEKTKLVPG 67
Query: 89 DNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD 148
+NVWVN D+LMTHDVCGPG+ GIFKKEFG NAKVWDREKIVIIPDHYIFT+DERANRNVD
Sbjct: 68 ENVWVNADVLMTHDVCGPGTIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVD 127
Query: 149 ILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAG 208
ILRDF EQ+IKYFYDI D G+F+ANPDYKGVCH+ALAQEGHCRPGEVL GTDSHTCTAG
Sbjct: 128 ILRDFSKEQSIKYFYDITDRGDFRANPDYKGVCHVALAQEGHCRPGEVLFGTDSHTCTAG 187
Query: 209 AFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAG 268
AFGQFATGIGNTDAGF++GTGK+LLKVP TLRFVLDGEMP YLLAKDLILQIIGEI+V+G
Sbjct: 188 AFGQFATGIGNTDAGFIMGTGKILLKVPGTLRFVLDGEMPSYLLAKDLILQIIGEITVSG 247
Query: 269 ATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVY 328
ATYKSMEFVGT VER++ME+RMTLCNM +EAGGKNGVVPAD T+ YL+ KT +E VY
Sbjct: 248 ATYKSMEFVGTAVERMTMEDRMTLCNMAIEAGGKNGVVPADEVTYSYLKGKTDKEFESVY 307
Query: 329 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLA 388
SD A+F+ EYR D+SKLEP+VAKPHSPD RALAR+CKDVKIDRVYIGSCTGGKTEDF+A
Sbjct: 308 SDAGATFIQEYRIDVSKLEPVVAKPHSPDKRALARDCKDVKIDRVYIGSCTGGKTEDFVA 367
Query: 389 AAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCG 448
AAK+ +G+KVKVPTFLVPATQKVW+D+Y +P+P + GKTC+QIFEEAGCDTPASPSC
Sbjct: 368 AAKLLNKAGQKVKVPTFLVPATQKVWVDLYAMPLPEADGKTCAQIFEEAGCDTPASPSCA 427
Query: 449 ACLGGPKDTYARMNEP 464
ACLGGPKDTYARMNEP
Sbjct: 428 ACLGGPKDTYARMNEP 443
>gi|148909310|gb|ABR17754.1| unknown [Picea sitchensis]
Length = 516
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/479 (72%), Positives = 407/479 (84%), Gaps = 6/479 (1%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSS-----TSQFSVNKCKKLAVSKKIVSVMAPQQS 55
MAS + AP++S + K+ + ++ S+ + K +K + +VMAP Q
Sbjct: 1 MASPATATAPSTSHLLKYKNGIHYTLATGLTPLNSKATAAWKNKKRTAKFVAAVMAPPQP 60
Query: 56 ERR-PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKK 114
++R PA+TGSVK+AMT+TEKI +RA+E+ Q+SPG+NVWV VD LMTHDVCGPG+ GIFKK
Sbjct: 61 QQRSPASTGSVKHAMTMTEKILARAAERSQVSPGENVWVKVDNLMTHDVCGPGTIGIFKK 120
Query: 115 EFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKAN 174
EFG AKVWDREKIVIIPDHYIFTSDERANRNVDI+RDF +EQNIKYFYDI D +F+AN
Sbjct: 121 EFGSQAKVWDREKIVIIPDHYIFTSDERANRNVDIIRDFALEQNIKYFYDITDRSDFRAN 180
Query: 175 PDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLK 234
PDYKGVCHIALAQEGHCRPGEVL GTDSHTC AGAFGQFA+GIGNTDAGF++GTGK+L+K
Sbjct: 181 PDYKGVCHIALAQEGHCRPGEVLFGTDSHTCNAGAFGQFASGIGNTDAGFIMGTGKLLVK 240
Query: 235 VPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCN 294
VP TLRFV+DGEMP +LLAKDLILQIIGEI+V+GATY++MEF G+TV+ L+ME+RMTLCN
Sbjct: 241 VPATLRFVMDGEMPHFLLAKDLILQIIGEITVSGATYRAMEFSGSTVKSLTMEDRMTLCN 300
Query: 295 MVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPH 354
MVVEAGGKNGVV AD TF YLE KTS +E +YSDE A +L EYRFD+SKLEPLVAKPH
Sbjct: 301 MVVEAGGKNGVVDADQITFDYLEGKTSSSFEALYSDEAARYLQEYRFDVSKLEPLVAKPH 360
Query: 355 SPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW 414
SPDNRALAREC+ +KIDRVYIGSCTGGKTEDF+AAAK+ +++G+KVKVPTFLVPATQKVW
Sbjct: 361 SPDNRALARECRHIKIDRVYIGSCTGGKTEDFMAAAKIMISAGQKVKVPTFLVPATQKVW 420
Query: 415 MDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
MD+YTLPVPG GKTCSQIFEEAGCDTPA+P+CGACLGGP+DTYARMN P + +K
Sbjct: 421 MDLYTLPVPGGNGKTCSQIFEEAGCDTPANPNCGACLGGPRDTYARMNVPQVCVSTTNK 479
>gi|356574728|ref|XP_003555497.1| PREDICTED: 3-isopropylmalate dehydratase-like [Glycine max]
Length = 505
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/465 (75%), Positives = 396/465 (85%), Gaps = 3/465 (0%)
Query: 11 TSSFINNKKDLGSFCFSSTSQF--SVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNA 68
+S FI KKDLG F F S S KCKK + S KIVSV++ +++R P+ TGS K
Sbjct: 5 SSPFITCKKDLGFFAFPSPSSIIGKRQKCKKTS-SNKIVSVVSSPKNKRSPSATGSTKIP 63
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT TEKI +RA+EK ++ PG+N W NVD+LM +D+ PG GIFKKEFG AKVWDREKI
Sbjct: 64 MTATEKILARAAEKCEVRPGENAWANVDVLMINDITCPGISGIFKKEFGNTAKVWDREKI 123
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT+DERA+RNVDI RDFC+EQ+IKYFYDI+D NF+ANPDYKGVCH+ALAQE
Sbjct: 124 VVIPDHYIFTNDERAHRNVDIARDFCVEQDIKYFYDIQDRSNFRANPDYKGVCHVALAQE 183
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GHCRPGEVL GTDSHT +AGAFGQFATG+GNTDA FVLGTGK+LLKVPPTLRFVLDGE P
Sbjct: 184 GHCRPGEVLFGTDSHTTSAGAFGQFATGVGNTDAAFVLGTGKILLKVPPTLRFVLDGEKP 243
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
YLLAKDLIL IIGEISV+GATYK+MEFVGTT+E LSMEERMTLCNMV+EAGGKNG+V A
Sbjct: 244 SYLLAKDLILNIIGEISVSGATYKTMEFVGTTIESLSMEERMTLCNMVIEAGGKNGIVAA 303
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TT+KYLEDKTS PYEPV SDE A FL++YRFD+S +EPLVAKPHSPDNRALAREC +V
Sbjct: 304 DRTTYKYLEDKTSAPYEPVSSDENARFLAQYRFDVSNMEPLVAKPHSPDNRALARECNNV 363
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKTEDF+AAAKVFLA GK VKVPTFLVPATQKVWMD+YTL VP SGGK
Sbjct: 364 KIDRVYIGSCTGGKTEDFMAAAKVFLAGGKTVKVPTFLVPATQKVWMDLYTLEVPDSGGK 423
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
TCS IFEEAGCD PASPSC AC+GGP+DTY R+NEP + ++
Sbjct: 424 TCSMIFEEAGCDPPASPSCAACMGGPRDTYGRLNEPQVCVSTTNR 468
>gi|148909963|gb|ABR18066.1| unknown [Picea sitchensis]
Length = 515
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/471 (73%), Positives = 402/471 (85%), Gaps = 9/471 (1%)
Query: 1 MASSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLA------VSKKIVSVMAPQQ 54
MAS + AP+ S + K+ + +T +N A +K + +VMAP Q
Sbjct: 1 MASPATARAPSISHLLKYKN--GIHYDATGLTPLNSKATAAWKTQKRTTKFVAAVMAPPQ 58
Query: 55 SERR-PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFK 113
++R PA+TGSVK+AMT+TEKI +RA+EK Q++PG+NVWV VD LMTHDVCGPG+ GIFK
Sbjct: 59 PQQRSPASTGSVKHAMTMTEKILARAAEKSQVNPGENVWVKVDNLMTHDVCGPGTIGIFK 118
Query: 114 KEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKA 173
KEFG AKVWDREKIVIIPDHYIFTSDERANRNVDI+RDF +EQNIKYFYDI D +F+A
Sbjct: 119 KEFGSQAKVWDREKIVIIPDHYIFTSDERANRNVDIIRDFALEQNIKYFYDITDRSDFRA 178
Query: 174 NPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLL 233
NPDYKGVCHIALAQEGHCRPGEVL GTDSHTC AGAFGQFA+GIGNTDAGF++GTGK+L+
Sbjct: 179 NPDYKGVCHIALAQEGHCRPGEVLFGTDSHTCNAGAFGQFASGIGNTDAGFIMGTGKLLI 238
Query: 234 KVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLC 293
KVP TLRFV+DGEMP +LLAKDLILQIIGEI+V+G TY++MEF G+TV+ L+ME+RMTLC
Sbjct: 239 KVPATLRFVMDGEMPHFLLAKDLILQIIGEITVSGGTYRAMEFSGSTVKSLTMEDRMTLC 298
Query: 294 NMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKP 353
NMVVEAGGKNGVV AD TTF YLE KTS +E +YSDE A +L EYRFD+SKLEPLVAKP
Sbjct: 299 NMVVEAGGKNGVVAADQTTFDYLEGKTSSSFEALYSDEAARYLQEYRFDVSKLEPLVAKP 358
Query: 354 HSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKV 413
HSPDNRALAREC+ +KIDRVYIGSCTGGKTEDF+AAAK+ +++G+KVKVPTFLVPATQKV
Sbjct: 359 HSPDNRALARECRHIKIDRVYIGSCTGGKTEDFMAAAKILISAGQKVKVPTFLVPATQKV 418
Query: 414 WMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
WMD+YTLPVPG GKTC+QIFEEAGCDTPASP+CGACLGGP+DTYARMN P
Sbjct: 419 WMDLYTLPVPGGNGKTCAQIFEEAGCDTPASPNCGACLGGPRDTYARMNVP 469
>gi|302766327|ref|XP_002966584.1| hypothetical protein SELMODRAFT_439578 [Selaginella moellendorffii]
gi|300166004|gb|EFJ32611.1| hypothetical protein SELMODRAFT_439578 [Selaginella moellendorffii]
Length = 507
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/458 (74%), Positives = 385/458 (84%), Gaps = 22/458 (4%)
Query: 29 TSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPG 88
+S FSVN S I +VMAP Q +R PA+TG+VK+AMTLTEKI +RASEK +L PG
Sbjct: 4 SSYFSVNARPMSRRSSTISAVMAPPQQQRAPASTGAVKHAMTLTEKILARASEKTKLVPG 63
Query: 89 DNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD 148
+NVWVN D+LMTHDVCGPG+ GIFKKEFG NAKVWDREKIVIIPDHYIFT+DERANRNVD
Sbjct: 64 ENVWVNADVLMTHDVCGPGTIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVD 123
Query: 149 ILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAG 208
ILRDF EQ+IKYFYDI D +F+ANPDYKGVCH+ALAQEGHCRPGEVL GTDSHTCTAG
Sbjct: 124 ILRDFSKEQSIKYFYDITDRSDFRANPDYKGVCHVALAQEGHCRPGEVLFGTDSHTCTAG 183
Query: 209 AFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAG 268
AFGQFATGIGNTDAGF++GTGK+LLKVP TLRFVLDGEMP YLLAKDLILQIIGEI+V+G
Sbjct: 184 AFGQFATGIGNTDAGFIMGTGKILLKVPGTLRFVLDGEMPSYLLAKDLILQIIGEITVSG 243
Query: 269 ATYKSMEFVGTTVERLS----------------------MEERMTLCNMVVEAGGKNGVV 306
ATYKSMEFVGT VER++ ME+RMTLCNM +EAGGKNGVV
Sbjct: 244 ATYKSMEFVGTAVERMTVSSFSPYLIEIVHLISRSELTQMEDRMTLCNMAIEAGGKNGVV 303
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
PAD T+ YL+ KT +E VYSD A+F+ EYR D+SKLEP+VAKPHSPD R LAR+CK
Sbjct: 304 PADEVTYSYLKGKTEKEFESVYSDAGATFIQEYRIDVSKLEPVVAKPHSPDKRVLARDCK 363
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
DVKIDRVYIGSCTGGKTEDF+AAAK+ +G+KVKVPTFLVPATQKVW+D+Y +P+P +
Sbjct: 364 DVKIDRVYIGSCTGGKTEDFVAAAKLLNKAGQKVKVPTFLVPATQKVWVDLYAMPLPEAD 423
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
GKTC+QIFEEAGCDTPASPSC ACLGGPKDTYARMNEP
Sbjct: 424 GKTCAQIFEEAGCDTPASPSCAACLGGPKDTYARMNEP 461
>gi|307110124|gb|EFN58361.1| hypothetical protein CHLNCDRAFT_30204 [Chlorella variabilis]
Length = 487
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/420 (74%), Positives = 365/420 (86%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
++ V AP R PA+TG+VK AMT+TEKI ++ S+K ++PGDNVW VD LMTHDVC
Sbjct: 21 RVSCVAAPPTPSRTPASTGAVKRAMTMTEKILAKHSDKASVTPGDNVWTKVDKLMTHDVC 80
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+FGIF++EFG+ A+VWD E++VIIPDHYIFT+D RANRNVDILRD IKYFYD
Sbjct: 81 GPGTFGIFQQEFGDAAEVWDPERVVIIPDHYIFTADPRANRNVDILRDVAQRYGIKYFYD 140
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
IKD G+F+ANPDYKGVCH+ALAQEGHC+PGEVL GTDSHTC AGAFGQFATG+GNTDAGF
Sbjct: 141 IKDRGDFRANPDYKGVCHVALAQEGHCKPGEVLFGTDSHTCNAGAFGQFATGVGNTDAGF 200
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
+LGTGK+L+KVPPT+RF LDG+MP +LLAKDLIL IIGEISVAGATY+SMEFVG V ++
Sbjct: 201 ILGTGKLLIKVPPTMRFALDGQMPPWLLAKDLILHIIGEISVAGATYRSMEFVGDAVSQM 260
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+MEERMT+CNMVVEAGGKNGV PAD TTF Y+E +TS PYE VYSD+ AS+ ++YRFD+S
Sbjct: 261 NMEERMTVCNMVVEAGGKNGVCPADQTTFDYVESRTSEPYEAVYSDDTASYFADYRFDVS 320
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEP+VA PHSPDNR LAREC+DV++DRVYIGSCTGGKTEDF+AAAK+ +G +VKVPT
Sbjct: 321 KLEPVVAAPHSPDNRKLARECRDVRVDRVYIGSCTGGKTEDFMAAAKLLHGAGGEVKVPT 380
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+LVPATQKVW DVYTLPVPG GKT +QIFE AGC TPA+PSC ACLGGP+DT+ARMNEP
Sbjct: 381 YLVPATQKVWGDVYTLPVPGCDGKTAAQIFEAAGCVTPAAPSCAACLGGPRDTFARMNEP 440
>gi|357440913|ref|XP_003590734.1| 3-isopropylmalate dehydratase large subunit [Medicago truncatula]
gi|355479782|gb|AES60985.1| 3-isopropylmalate dehydratase large subunit [Medicago truncatula]
Length = 553
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/503 (67%), Positives = 397/503 (78%), Gaps = 50/503 (9%)
Query: 11 TSSFINNKKD-LGSFCFSST--SQFSVN-KCKKLAVSKKIVSVMAPQQSERRPATTGSV- 65
+SSFI+ KK+ LG F F S+ F N KCKK +SK IVS+++P +++R P+ TGSV
Sbjct: 5 SSSFISYKKEHLGYFVFPSSFPCSFITNMKCKK-TISKNIVSLVSPVKNKRNPSATGSVC 63
Query: 66 KNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR 125
K MT TEKI +RASEKP++ PG+N WVNVD+LM +D+ PG GIFK+EFG AKVWD
Sbjct: 64 KTPMTTTEKILARASEKPEVKPGENAWVNVDVLMINDITCPGVSGIFKREFGSTAKVWDP 123
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
EKI++IPDHYIFT+DERA+RNVD R+FCMEQ+IKYFYDI+D NF+AN DYKGVCH+AL
Sbjct: 124 EKIIVIPDHYIFTNDERAHRNVDTAREFCMEQDIKYFYDIQDRSNFRANSDYKGVCHVAL 183
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
AQEGHCRPGEVLLGTDSHT +AGAFGQFATG+GNTDA F+LGTGK+LLKVPPT+RFV+DG
Sbjct: 184 AQEGHCRPGEVLLGTDSHTTSAGAFGQFATGVGNTDAAFILGTGKILLKVPPTMRFVIDG 243
Query: 246 EMPDYLLAKDLIL--------------------------QIIGEISVAGATYKSMEFVGT 279
EMP+YLLAKDLIL QIIGEIS++GATYK+MEFVGT
Sbjct: 244 EMPNYLLAKDLILNYIIHFNYFFSLTWWCCHVQTLTTNIQIIGEISMSGATYKTMEFVGT 303
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKA------ 333
T+E L+MEERMTLCNMVVEAGGKNG+V AD TT+KYLEDKTS PYEPV+SDEKA
Sbjct: 304 TIETLTMEERMTLCNMVVEAGGKNGIVAADRTTYKYLEDKTSTPYEPVFSDEKARFGINE 363
Query: 334 -----------SFLSEYRF-DISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGG 381
SF + F ++ L L + PHSPDNRALAREC +VKIDRVYIGSCTGG
Sbjct: 364 GYIEKSPINIKSFGGDLMFRSLNGLGHLSSVPHSPDNRALARECNNVKIDRVYIGSCTGG 423
Query: 382 KTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDT 441
KT DF+AAAKV LA+GK VKVPTFLVPATQKVWMD+YTL VPGSGGKTCS+IFE+AGCD
Sbjct: 424 KTGDFMAAAKVSLAAGKTVKVPTFLVPATQKVWMDIYTLEVPGSGGKTCSKIFEDAGCDP 483
Query: 442 PASPSCGACLGGPKDTYARMNEP 464
PASPSC AC+GGPKDTY R+NEP
Sbjct: 484 PASPSCAACMGGPKDTYGRINEP 506
>gi|159488260|ref|XP_001702135.1| isopropylmalate dehydratase, large subunit [Chlamydomonas
reinhardtii]
gi|158271404|gb|EDO97224.1| isopropylmalate dehydratase, large subunit [Chlamydomonas
reinhardtii]
Length = 487
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/422 (72%), Positives = 365/422 (86%)
Query: 43 SKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHD 102
S K+ ++ AP R P++TGSVK AMT+TEKI + S+ + PGDN+W VD LMTHD
Sbjct: 20 SVKVSAISAPPTPARAPSSTGSVKRAMTMTEKILANHSDNSAVKPGDNIWTKVDKLMTHD 79
Query: 103 VCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYF 162
VCGPG+FGIF+KEFG NAKVWD E++VIIPDHYIFTSD RANRNVDILR+ + NIKYF
Sbjct: 80 VCGPGTFGIFQKEFGPNAKVWDNERVVIIPDHYIFTSDARANRNVDILREVAGKYNIKYF 139
Query: 163 YDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA 222
YDI D NFKANPDYKGVCH+ALAQEGHC+PGEVL GTDSHTC AGAFGQFATG+GNTDA
Sbjct: 140 YDITDRSNFKANPDYKGVCHVALAQEGHCKPGEVLFGTDSHTCNAGAFGQFATGVGNTDA 199
Query: 223 GFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE 282
GF+LGTGK+L+KVPPT+RF++DGEMP+YLLAKDLILQIIGEISVAGATYK+MEF G+ +E
Sbjct: 200 GFILGTGKLLIKVPPTMRFIMDGEMPEYLLAKDLILQIIGEISVAGATYKAMEFAGSAIE 259
Query: 283 RLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFD 342
++M+ERMT+CNMVVEAGGKNGV+ D TTF Y++ +T +EPVYSD AS++++Y++D
Sbjct: 260 GMNMDERMTICNMVVEAGGKNGVIAPDQTTFDYVKARTQEAFEPVYSDGAASYIADYKWD 319
Query: 343 ISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKV 402
+SKLEPLVA PHSPDNR AREC DVKIDRVYIGSCTGGKTEDF++AAK+F + ++VKV
Sbjct: 320 VSKLEPLVAAPHSPDNRKTARECSDVKIDRVYIGSCTGGKTEDFISAAKLFYRAKRQVKV 379
Query: 403 PTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
PT+LVPATQKVW DVYT+PVPG GKT ++IFEE+GC TPA+PSC ACLGGP+DT+ARMN
Sbjct: 380 PTYLVPATQKVWADVYTMPVPGCDGKTAAEIFEESGCITPAAPSCAACLGGPRDTFARMN 439
Query: 463 EP 464
EP
Sbjct: 440 EP 441
>gi|302844640|ref|XP_002953860.1| large subunit of isopropylmalate dehydratase [Volvox carteri f.
nagariensis]
gi|300260968|gb|EFJ45184.1| large subunit of isopropylmalate dehydratase [Volvox carteri f.
nagariensis]
Length = 487
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/420 (73%), Positives = 361/420 (85%)
Query: 45 KIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVC 104
K+ +V A R PA+TGSVK A+T+TEKI + S+ + PGDN+W VD LMTHDVC
Sbjct: 22 KVFAVAATPTPARTPASTGSVKRALTMTEKILANHSDNSTVKPGDNIWTRVDKLMTHDVC 81
Query: 105 GPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYD 164
GPG+FGIF+KEFG NA+VWD E++VIIPDHYIFTSD RANRNVDILRD + NIKYFYD
Sbjct: 82 GPGTFGIFQKEFGPNAQVWDNERVVIIPDHYIFTSDARANRNVDILRDMATKYNIKYFYD 141
Query: 165 IKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGF 224
I D NF+ANPDYKGVCH+ALAQEGHC+PGEVL GTDSHTC AGAFGQFATG+GNTDAGF
Sbjct: 142 ITDRSNFRANPDYKGVCHVALAQEGHCKPGEVLFGTDSHTCNAGAFGQFATGVGNTDAGF 201
Query: 225 VLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284
+LGTGK+L+KVPPT+RF++DGEMP+YLLAKDLILQIIGEISVAGATYK+MEF GT +E +
Sbjct: 202 ILGTGKLLIKVPPTMRFIMDGEMPEYLLAKDLILQIIGEISVAGATYKAMEFAGTAIEGM 261
Query: 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDIS 344
+M+ERMT+CNMVVEAGGKNGV+ D TTF Y+ +T P+E VYSD A++ ++Y++D+S
Sbjct: 262 NMDERMTICNMVVEAGGKNGVIAPDQTTFDYVRARTQEPFEAVYSDGAANYCADYKWDVS 321
Query: 345 KLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
KLEPLVA PHSPDNR AREC DVKIDRVYIGSCTGGKTEDFL+AAK+F + ++VKVPT
Sbjct: 322 KLEPLVAAPHSPDNRKTARECSDVKIDRVYIGSCTGGKTEDFLSAAKLFYRAKRQVKVPT 381
Query: 405 FLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+LVPATQKVW DVYTLPVPG GKT ++IFEEAGC TPA+PSC ACLGGP+DT+ARMNEP
Sbjct: 382 YLVPATQKVWADVYTLPVPGCDGKTAAEIFEEAGCVTPAAPSCAACLGGPRDTFARMNEP 441
>gi|384252024|gb|EIE25501.1| large subunit of isopropylmalate dehydratase [Coccomyxa
subellipsoidea C-169]
Length = 441
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 291/394 (73%), Positives = 335/394 (85%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVI 130
+TEKI ++ S + PG N+W NVD LMTHDVCGPG+FGIF++EFGENA+VWD KIVI
Sbjct: 1 MTEKILAKHSNNTTVVPGQNIWTNVDKLMTHDVCGPGTFGIFQREFGENAQVWDPTKIVI 60
Query: 131 IPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGH 190
IPDHYIFTSD RANRNVDILRD + IKYFYDI + +F+ANPDYKGVCH+ALAQEGH
Sbjct: 61 IPDHYIFTSDPRANRNVDILRDMVNKYGIKYFYDITNRSDFRANPDYKGVCHVALAQEGH 120
Query: 191 CRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDY 250
C+PGEVL GTDSHTC AGAFGQFATGIGNTDAGF+LGTGK+L+KVPPT+RFVL+GEMP Y
Sbjct: 121 CKPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFILGTGKLLIKVPPTMRFVLEGEMPSY 180
Query: 251 LLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADG 310
L+AKDLILQIIGEI+VAG TYK+MEF G +E ++MEERMT+CNMVVEAG KNGV P D
Sbjct: 181 LMAKDLILQIIGEITVAGGTYKAMEFTGPVIEAMTMEERMTICNMVVEAGAKNGVCPPDE 240
Query: 311 TTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKI 370
TTF Y+ +T P+E V++D A ++ EYRFD+SK+EPLVA PHSPDNR AR+C+DVKI
Sbjct: 241 TTFDYVRQRTDEPFEAVHADAGAGYIEEYRFDVSKIEPLVAAPHSPDNRKNARDCRDVKI 300
Query: 371 DRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTC 430
DRVYIGSCTGGKTEDF+AAAK+ +G +VKVPTFLVPATQKVW D+Y LPV G GKT
Sbjct: 301 DRVYIGSCTGGKTEDFMAAAKLLHKAGGQVKVPTFLVPATQKVWADLYGLPVAGCDGKTA 360
Query: 431 SQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+QIFE AGCDTPA PSC ACLGGPKDTYARMNEP
Sbjct: 361 AQIFEAAGCDTPAPPSCAACLGGPKDTYARMNEP 394
>gi|428306987|ref|YP_007143812.1| homoaconitate hydratase family protein [Crinalium epipsammum PCC
9333]
gi|428248522|gb|AFZ14302.1| homoaconitate hydratase family protein [Crinalium epipsammum PCC
9333]
Length = 440
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 288/397 (72%), Positives = 341/397 (85%), Gaps = 5/397 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI +RAS + + PGDN+WVNVD+LMTHDVCGPG+ G+FK+EFG +AKVWD EK
Sbjct: 2 GMTLTEKILARASGRSVVEPGDNIWVNVDLLMTHDVCGPGTIGVFKREFGADAKVWDTEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+IPDHYIFT+DERANRNVDILRDF EQ IKYFYDI D +FKANPDYKGVCHIALAQ
Sbjct: 62 IVLIPDHYIFTADERANRNVDILRDFAKEQGIKYFYDITDRSDFKANPDYKGVCHIALAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFGQFATGIGNTDAGF++GTGK+L+KVP T+RF+L+GEM
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFLLNGEM 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P YLLAKDLILQIIG+I VAGATY++MEF G+T++ LSME+RMTLCNM +EAGGKNG V
Sbjct: 182 PKYLLAKDLILQIIGDIGVAGATYRAMEFAGSTIQHLSMEDRMTLCNMAIEAGGKNGTVA 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TTF+Y+ D+T+ P+EPVY+D A F S+ ++D+S+LEP+VAKPHSPDNRALAREC+D
Sbjct: 242 PDETTFEYVRDRTNKPFEPVYTDADARFYSDRQYDVSQLEPVVAKPHSPDNRALARECRD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGKT DF+ AA+V G++VKVPT++VPATQKV+ D++T G
Sbjct: 302 VKIDRVYIGSCTGGKTSDFMYAAQVL--KGQQVKVPTYIVPATQKVYEDLFTTKYD---G 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
KT S+I +AGC PA+PSC ACLGGPKDT+ RMNEP
Sbjct: 357 KTLSEILLDAGCIEPAAPSCAACLGGPKDTFGRMNEP 393
>gi|300864644|ref|ZP_07109502.1| homoaconitate hydratase family protein [Oscillatoria sp. PCC 6506]
gi|300337393|emb|CBN54650.1| homoaconitate hydratase family protein [Oscillatoria sp. PCC 6506]
Length = 439
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/396 (72%), Positives = 336/396 (84%), Gaps = 5/396 (1%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI ++AS++P + PG+N+WV+VD+LMTHDVCGPG+ G+FK+EFG +AKVWD EKI
Sbjct: 3 MTLTEKILAKASQRPSVEPGENIWVDVDLLMTHDVCGPGTIGVFKREFGADAKVWDTEKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT+DERANRNVDILR+F EQ IKYFYDI D NFKANPDYKGVCH+ALAQE
Sbjct: 63 VLIPDHYIFTNDERANRNVDILREFASEQGIKYFYDITDRSNFKANPDYKGVCHVALAQE 122
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGEVL GTDSHTC AGAFGQFATGIGNTDA F+LGTGK+L+KVP T+RFVL+GEMP
Sbjct: 123 GHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFILGTGKLLIKVPATMRFVLNGEMP 182
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
DYLLAKDLILQIIG+I VAGA Y++MEF G VERL+MEERMTLCNM +EAGGKNG V
Sbjct: 183 DYLLAKDLILQIIGDIGVAGANYRTMEFAGEAVERLTMEERMTLCNMAIEAGGKNGTVAP 242
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF+Y+ +TS P+E VY+D A F S+ +D+S+LEP+VAKPHSPDNR LAR C+DV
Sbjct: 243 DETTFEYVRARTSKPFEAVYTDSDAKFYSDRTYDVSQLEPVVAKPHSPDNRDLARNCRDV 302
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKT DFL AAK L G +VKVPT+LVPATQKV+ D+++L G+
Sbjct: 303 KIDRVYIGSCTGGKTSDFLHAAK--LIKGNQVKVPTYLVPATQKVYEDLFSLK---HEGQ 357
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
T S+IF AGC PA+PSC ACLGGPKDT+ R+NEP
Sbjct: 358 TLSEIFLAAGCIEPAAPSCAACLGGPKDTFGRLNEP 393
>gi|452825349|gb|EME32346.1| 3-isopropylmalate dehydratase large subunit [Galdieria sulphuraria]
Length = 666
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/428 (66%), Positives = 349/428 (81%), Gaps = 7/428 (1%)
Query: 40 LAVSKKIVSVMAPQQSERRPATT--GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDI 97
L + + + +AP +S R A++ SV++ MTLTEKI S+A+ +P + PG+N+WVNVD+
Sbjct: 183 LTTFQPLTATVAPPKSSRHVASSVSNSVQHPMTLTEKILSKAANRPCVKPGENIWVNVDV 242
Query: 98 LMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQ 157
LMTHDVCGPG+ GIFK+EFGENAKVWD EK++IIPDHYIFT+D+RANRNVDILR+F EQ
Sbjct: 243 LMTHDVCGPGTIGIFKREFGENAKVWDPEKVIIIPDHYIFTADQRANRNVDILREFAREQ 302
Query: 158 NIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGI 217
NIKYFYDIKD NF NPDYKGVCHIALAQEGH RPGEVL GTDSHTC AGAFG FATGI
Sbjct: 303 NIKYFYDIKDRQNFLNNPDYKGVCHIALAQEGHTRPGEVLFGTDSHTCNAGAFGMFATGI 362
Query: 218 GNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFV 277
GNTDAGF+LGTGK+L+KVP T++FV G+MPDYLLAKDLILQIIG+ISV+GATY+++EF
Sbjct: 363 GNTDAGFILGTGKLLIKVPATMKFVFHGDMPDYLLAKDLILQIIGDISVSGATYRTLEFS 422
Query: 278 GTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLS 337
G + +LSMEER TLCNM +EAGGKN V+P D TT +YL+ +T YE +D A S
Sbjct: 423 GDIISQLSMEERQTLCNMAIEAGGKNAVIPCDQTTSEYLKGRTQRSYEVFQTDSSADLYS 482
Query: 338 EYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASG 397
+ +LEP+VAKPHSPDNR LA+ C DVK+DRVYIGSCTGGKTEDF+AAA++F
Sbjct: 483 HREYITHQLEPVVAKPHSPDNRDLAKNCSDVKVDRVYIGSCTGGKTEDFIAAARIF--KD 540
Query: 398 KKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDT 457
+KVK+PTFLVPAT++V+ D+Y L + GG+T +QIFE+AGC PA PSC ACLGGPKDT
Sbjct: 541 RKVKIPTFLVPATRQVYDDIYRLSI---GGQTLAQIFEQAGCIGPAPPSCAACLGGPKDT 597
Query: 458 YARMNEPM 465
+AR+NEP+
Sbjct: 598 FARINEPL 605
>gi|428207126|ref|YP_007091479.1| homoaconitate hydratase family protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009047|gb|AFY87610.1| homoaconitate hydratase family protein [Chroococcidiopsis thermalis
PCC 7203]
Length = 439
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 283/396 (71%), Positives = 337/396 (85%), Gaps = 5/396 (1%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI ++AS + + PG+N+WV+VD+LMTHDVCGPG+ G+FK+EFG + KVW+ EKI
Sbjct: 3 MTLTEKILAKASGRNAVEPGENIWVDVDLLMTHDVCGPGTIGVFKREFGADTKVWNPEKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT+DERANRNVDILRDF EQ IKYFYDI D NFKANPDYKGVCHIALAQE
Sbjct: 63 VLIPDHYIFTADERANRNVDILRDFAHEQGIKYFYDITDRSNFKANPDYKGVCHIALAQE 122
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGEVL GTDSHTC AGAFGQFATGIGNTDA F++GTGK+L+KVP T+RFVLDGEMP
Sbjct: 123 GHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFIMGTGKLLIKVPATMRFVLDGEMP 182
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+YLLAKDLIL IIG+ISVAGA Y++MEF G TV R++ME+RMTLCNM +EAGGKNG + A
Sbjct: 183 NYLLAKDLILHIIGDISVAGANYRTMEFAGETVSRMTMEDRMTLCNMAIEAGGKNGTIAA 242
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF+Y+ +T P+EPVY+D A F S+ R+D+S+LEP+VA+PHSPDNRALAREC DV
Sbjct: 243 DDTTFEYVRARTDKPFEPVYTDSDAKFYSDRRYDVSQLEPVVAQPHSPDNRALARECSDV 302
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKTEDF+ AA + G++VKVPT+LVPATQKV+ D++TL G+
Sbjct: 303 KIDRVYIGSCTGGKTEDFIHAAHIL--KGQQVKVPTYLVPATQKVYNDLFTLKYE---GQ 357
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
T S+IF +AGC P +PSC ACLGGPKDT+ RMN+P
Sbjct: 358 TLSEIFLQAGCIEPTAPSCAACLGGPKDTFGRMNKP 393
>gi|434393332|ref|YP_007128279.1| homoaconitate hydratase family protein [Gloeocapsa sp. PCC 7428]
gi|428265173|gb|AFZ31119.1| homoaconitate hydratase family protein [Gloeocapsa sp. PCC 7428]
Length = 440
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 337/397 (84%), Gaps = 5/397 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI ++AS + + PG+N+WV+VD+LMTHDVCGPG+ G+FK+EFGE+AKVWD EK
Sbjct: 2 GMTLTEKILAKASNRKVVEPGENIWVDVDVLMTHDVCGPGTIGVFKREFGEDAKVWDAEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+IPDHYIFT+DERANRNVDILR+F EQ IKYFYDI D NFKANPDYKGVCHIALAQ
Sbjct: 62 IVLIPDHYIFTADERANRNVDILREFAQEQGIKYFYDITDRANFKANPDYKGVCHIALAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFGQFATGIGNTDAGF++GTGK+L+KVP T+RFVL+GEM
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLNGEM 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDYLLAKDLILQIIG+ISV+GATY++MEF G V+R++MEERMTLCNM +EAGGKNG +
Sbjct: 182 PDYLLAKDLILQIIGDISVSGATYRTMEFAGEAVQRMTMEERMTLCNMAIEAGGKNGTIA 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TT++Y+ +T P+E Y+D A F S+ +D+S+LEP+VAKPHSPDNRALAREC+D
Sbjct: 242 PDETTYEYVRARTDKPFESFYTDSDAKFYSDRTYDVSQLEPVVAKPHSPDNRALARECRD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGKT DF+ AA++ G +VKVPT++VPATQKV+ D++T G
Sbjct: 302 VKIDRVYIGSCTGGKTTDFVNAARIL--KGHQVKVPTYIVPATQKVYEDLFTYKY---DG 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+T S+IF +GC PA+PSC ACLGGPKDT+ RMN+P
Sbjct: 357 QTLSEIFLNSGCIEPAAPSCAACLGGPKDTFGRMNKP 393
>gi|113476324|ref|YP_722385.1| homoaconitate hydratase family protein [Trichodesmium erythraeum
IMS101]
gi|110167372|gb|ABG51912.1| homoaconitate hydratase family protein [Trichodesmium erythraeum
IMS101]
Length = 439
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 283/396 (71%), Positives = 337/396 (85%), Gaps = 5/396 (1%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI ++AS K ++PG+N+WVNVD+LMTHDVCGPG+ GIFK+EFGENAKVWD+EKI
Sbjct: 3 MTMVEKILAKASGKSTVNPGENIWVNVDVLMTHDVCGPGTIGIFKREFGENAKVWDKEKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT+DERANRNVDILRDF EQNIKYFYDI + NFKANPDYKGVCH+ALAQE
Sbjct: 63 VLIPDHYIFTADERANRNVDILRDFAQEQNIKYFYDIIERSNFKANPDYKGVCHVALAQE 122
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGEVL GTDSHTC AGAFG+FATGIGNTDA F+ GTGK+L+KVP T+RF+L+GEMP
Sbjct: 123 GHTRPGEVLFGTDSHTCNAGAFGEFATGIGNTDAAFIAGTGKLLVKVPATMRFILNGEMP 182
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+YLLAKDLILQIIG+ISV+GATY++MEF G TV +++MEERMTLCNMV+EAGGKNGV+
Sbjct: 183 NYLLAKDLILQIIGDISVSGATYRTMEFAGETVGQMTMEERMTLCNMVIEAGGKNGVIAP 242
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TF+YL +T P+E YSD+ A F S+ +D++KLEP+VAKPHSPDN+ LAR C+DV
Sbjct: 243 DEMTFEYLRGRTDKPFESFYSDKNAEFYSDRSYDVTKLEPVVAKPHSPDNKELARNCQDV 302
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKT DFL AAK L +VKVPT+LVPATQKV+ D++ + GK
Sbjct: 303 KIDRVYIGSCTGGKTSDFLHAAK--LIKDHQVKVPTYLVPATQKVYEDLFIIK---HDGK 357
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
T S+IF +AGC PA+PSC ACLGGPKDT+ R+NEP
Sbjct: 358 TLSEIFLDAGCIEPAAPSCAACLGGPKDTFGRLNEP 393
>gi|428318314|ref|YP_007116196.1| homoaconitate hydratase family protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428241994|gb|AFZ07780.1| homoaconitate hydratase family protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 440
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/403 (70%), Positives = 335/403 (83%), Gaps = 7/403 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI ++AS + Q+ PG+N+WV D+LMTHDVCGPG+ G+FK+EFGENAKVW+ +K
Sbjct: 2 GMTLTEKILAKASARTQVEPGENIWVETDVLMTHDVCGPGTIGVFKREFGENAKVWNPDK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+IPDHYIFT+DERANRNVDILRDF EQ IKYFYDI D +FKANPDYKGVCHIALAQ
Sbjct: 62 IVLIPDHYIFTNDERANRNVDILRDFAQEQGIKYFYDITDRSDFKANPDYKGVCHIALAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFGQFATGIGNTDA F++GTGK+L+KVP T+RFV +GE+
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFIMGTGKLLIKVPATMRFVFNGEL 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDYLLAKDLILQIIG+ISVAGA Y++MEF G TVERL+MEERMTLCNMV+EAGGKNG V
Sbjct: 182 PDYLLAKDLILQIIGDISVAGANYRTMEFAGDTVERLTMEERMTLCNMVIEAGGKNGTVA 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TTF Y+ +T P++ YSD A F S+ +D+SKLEP+VAKPHSPDNR LAR C+D
Sbjct: 242 PDKTTFDYVTSRTDKPFDSFYSDGDAKFYSDRTYDVSKLEPVVAKPHSPDNRDLARNCRD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGKT DFL AA++ G +VKVPT+LVPATQKV+ D++ V G
Sbjct: 302 VKIDRVYIGSCTGGKTSDFLNAARIL--KGNQVKVPTYLVPATQKVYEDLF---VTKYEG 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCL 470
+T S+IF AGC PA+PSC ACLGGPKDT+ RMNE A +C+
Sbjct: 357 QTLSEIFLAAGCIEPAAPSCAACLGGPKDTFGRMNE--AEICV 397
>gi|443313269|ref|ZP_21042881.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Synechocystis sp. PCC 7509]
gi|442776674|gb|ELR86955.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Synechocystis sp. PCC 7509]
Length = 440
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/403 (69%), Positives = 336/403 (83%), Gaps = 7/403 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI ++A+ + + PG N+WV+VD+LMTHDVCGPG+ G+FK+EFG +AKVWD EK
Sbjct: 2 GMTLTEKILAKAASQAVVEPGQNIWVDVDLLMTHDVCGPGTIGVFKREFGADAKVWDSEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+IPDHYIFT+DERANRNVDILRDF EQ IKYFYDI D +FKANPDYKGVCHI LAQ
Sbjct: 62 IVLIPDHYIFTADERANRNVDILRDFAREQGIKYFYDITDRSDFKANPDYKGVCHITLAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFGQFATGIGNTDAGF++GTGK+L+KVP T++FVL+G +
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMQFVLNGTL 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDYLLAKDLILQIIG+I VAGATY++MEF G TV+ L+MEERMTLCNM +EAGGKNG +
Sbjct: 182 PDYLLAKDLILQIIGDIGVAGATYRTMEFSGETVQNLTMEERMTLCNMAIEAGGKNGTIS 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD TT++YL +T+ P+E YSD A F S Y +D+S+LEP+VAKPHSPDNRA AREC D
Sbjct: 242 ADETTYEYLRSRTNKPFESFYSDSDAKFYSSYTYDVSQLEPVVAKPHSPDNRAKARECSD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGKT DF+ AA++ G+KVKVPT+LVPATQKV+ D++T G
Sbjct: 302 VKIDRVYIGSCTGGKTTDFINAARIL--KGQKVKVPTYLVPATQKVYEDLFTHKYQ---G 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCL 470
+T S+IF E+GC PA+PSC ACLGGPKDT+ RMN A +C+
Sbjct: 357 QTLSEIFIESGCIEPAAPSCAACLGGPKDTFGRMNS--AEVCV 397
>gi|334119497|ref|ZP_08493583.1| homoaconitate hydratase family protein [Microcoleus vaginatus
FGP-2]
gi|333458285|gb|EGK86904.1| homoaconitate hydratase family protein [Microcoleus vaginatus
FGP-2]
Length = 440
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/397 (71%), Positives = 331/397 (83%), Gaps = 5/397 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI ++AS + ++ PG+N+WV D+LMTHDVCGPG+ G+FK+EFGENAKVW+ +K
Sbjct: 2 GMTLTEKILAKASGRTKVEPGENIWVETDVLMTHDVCGPGTIGVFKREFGENAKVWNPDK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+IPDHYIFT+DERANRNVDILRDF EQ IKYFYDI D +FKANPDYKGVCHIALAQ
Sbjct: 62 IVLIPDHYIFTNDERANRNVDILRDFAQEQGIKYFYDITDRSDFKANPDYKGVCHIALAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFGQFATGIGNTDA F++GTGK+L+KVP T+RFV +GE+
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFIMGTGKLLIKVPATMRFVFNGEL 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDYLLAKDLILQIIG+ISVAGA Y++MEF G TVERL+MEERMTLCNMV+EAGGKNG V
Sbjct: 182 PDYLLAKDLILQIIGDISVAGANYRTMEFAGDTVERLTMEERMTLCNMVIEAGGKNGTVA 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TTF Y+ +T P++ YSD A F S+ +D+SKLEP+VAKPHSPDNR LAR C+D
Sbjct: 242 PDKTTFDYVTSRTDKPFDSFYSDGDAKFYSDRTYDVSKLEPVVAKPHSPDNRDLARNCRD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGKT DF AA++ G +VKVPT+LVPATQKV+ D++ V G
Sbjct: 302 VKIDRVYIGSCTGGKTSDFQNAARIL--KGNQVKVPTYLVPATQKVYEDLF---VTKYEG 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+T S+IF AGC PA+PSC ACLGGPKDT+ RMNEP
Sbjct: 357 QTLSEIFLAAGCIEPAAPSCAACLGGPKDTFGRMNEP 393
>gi|428222925|ref|YP_007107095.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Synechococcus sp. PCC 7502]
gi|427996265|gb|AFY74960.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Synechococcus sp. PCC 7502]
Length = 439
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/397 (69%), Positives = 327/397 (82%), Gaps = 5/397 (1%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTLTEKI +RAS + ++ PGDN+WVN D+LMTHDVCGPG+ GIFKKEFG +AKVWDREK
Sbjct: 2 AMTLTEKILARASNRSRVLPGDNIWVNADLLMTHDVCGPGTIGIFKKEFGADAKVWDREK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V+IPDHYIFT D RANRNVDILR+F EQNIKYFYDI DL NFKANPDYKGVCH+ALAQ
Sbjct: 62 LVLIPDHYIFTKDARANRNVDILREFAHEQNIKYFYDITDLSNFKANPDYKGVCHVALAQ 121
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTC AGAFG+FATGIGNTDA FVLGTGK+LLKVP T+RF DGEM
Sbjct: 122 EGHTRPGEVLFGTDSHTCNAGAFGEFATGIGNTDAAFVLGTGKLLLKVPATMRFTFDGEM 181
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P YLLAKDLILQ+IG+I VAGA Y+++E G + R++MEERMTLCNM +EAGGKNGV+
Sbjct: 182 PPYLLAKDLILQVIGDIGVAGANYRALEIDGEAIARMTMEERMTLCNMAIEAGGKNGVIA 241
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TTF Y++ +T P+ P+Y+D A + R+D+SKLEP+VAKPHSPDNRA RE D
Sbjct: 242 PDQTTFDYVKARTDKPFTPLYADTDAEYYYHKRYDVSKLEPVVAKPHSPDNRAKVREVSD 301
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKIDRVYIGSCTGGK DF+ AA+ L G +VKVPT+LVPATQKV+ D++T V G
Sbjct: 302 VKIDRVYIGSCTGGKITDFINAAQ--LLKGNQVKVPTYLVPATQKVYNDLFTETV---DG 356
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
+ ++IF +AGC PA+PSC ACLGGP+DT+ R+NEP
Sbjct: 357 LSLAEIFLQAGCIEPAAPSCAACLGGPQDTFGRLNEP 393
>gi|443479226|ref|ZP_21068849.1| homoaconitate hydratase family protein [Pseudanabaena biceps PCC
7429]
gi|443015291|gb|ELS30313.1| homoaconitate hydratase family protein [Pseudanabaena biceps PCC
7429]
Length = 439
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 334/402 (83%), Gaps = 7/402 (1%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI ++AS K +SPG+N+WVN D+LMTHDVCGPG+ GIFKKEFGE+AKVWDREK+
Sbjct: 3 MTLTEKILAKASGKNHVSPGENIWVNADLLMTHDVCGPGTIGIFKKEFGEDAKVWDREKL 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT D RANRNVDILR+F EQ+IKYFYDI DL +FKANPDYKGVCH+ALAQE
Sbjct: 63 VLIPDHYIFTKDARANRNVDILREFAREQDIKYFYDITDLSDFKANPDYKGVCHVALAQE 122
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGEVL GTDSHTC AGAFGQFATGIGNTDA FVLGTGK+L+KVP +++FV DGEMP
Sbjct: 123 GHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLVKVPASMKFVFDGEMP 182
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+LLAKDLIL +IG+ISV+GA Y++++ G + +++MEERMT+CNM +EAGGKN V+
Sbjct: 183 KHLLAKDLILHVIGDISVSGANYRALQIEGEAIAKMTMEERMTICNMAIEAGGKNAVIAP 242
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF Y+ +T+ P+E +Y+D A + +D+SKLEP+VAKPHSPDNRAL RE +DV
Sbjct: 243 DQTTFDYVRSRTNKPFESLYADADAEYYYIKHYDVSKLEPVVAKPHSPDNRALVREVQDV 302
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KIDRVYIGSCTGGKTEDF AA+ L G++VKVPT+LVPATQKV+ D+++L + G
Sbjct: 303 KIDRVYIGSCTGGKTEDFYHAAQ--LLKGQQVKVPTYLVPATQKVYNDLFSLKI---DGL 357
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCL 470
T S+IF +AGC PASPSC ACLGGP+DT+ R+NE A +C+
Sbjct: 358 TLSEIFLQAGCIEPASPSCAACLGGPQDTFGRVNE--AEVCV 397
>gi|428216723|ref|YP_007101188.1| homoaconitate hydratase family protein [Pseudanabaena sp. PCC 7367]
gi|427988505|gb|AFY68760.1| homoaconitate hydratase family protein [Pseudanabaena sp. PCC 7367]
Length = 440
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 268/396 (67%), Positives = 327/396 (82%), Gaps = 5/396 (1%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI +RA+E ++PG+N+WVN +LMTHDVCGPG+ G+FK+EFG +AKVWD ++I
Sbjct: 3 MTLTEKILARAAETKNIAPGENLWVNASLLMTHDVCGPGTIGVFKREFGADAKVWDPDRI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDHYIFT D RANRN+DILR+F EQ IKYFYDI DL +FKANPDYKGVCHIALAQE
Sbjct: 63 VLIPDHYIFTKDARANRNIDILREFAKEQGIKYFYDITDLSDFKANPDYKGVCHIALAQE 122
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGEVL GTDSHTC AGAFGQFATGIGNTDA FV+GTGK+LLKVP T+RF +GEMP
Sbjct: 123 GHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAAFVMGTGKLLLKVPATMRFTFEGEMP 182
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+LLAKDLIL +IGEI V GA Y+S++ G T+ R++MEERMTLCNM +EAGGKN V+
Sbjct: 183 PHLLAKDLILHVIGEIGVGGANYRSLQIEGETIARMTMEERMTLCNMAIEAGGKNAVIAP 242
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF Y++ +T +P+E +Y+D+ AS+ + FD+SKLEP+VAKPHSPDNRA REC DV
Sbjct: 243 DQTTFDYVQSRTDVPFEALYADDDASYYYQQTFDVSKLEPVVAKPHSPDNRATVRECSDV 302
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+DRVYIGSCTGGKT DF+ AAK L G +VKVPT+LVPATQKV+ D+++ V G+
Sbjct: 303 KVDRVYIGSCTGGKTTDFVNAAK--LLKGNQVKVPTYLVPATQKVYNDLFSTKVDGT--- 357
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
T S+IF ++GC PA+PSC ACLGGP+DT+ R+NEP
Sbjct: 358 TLSEIFLQSGCIEPAAPSCAACLGGPQDTFGRLNEP 393
>gi|449019316|dbj|BAM82718.1| 3-isopropylmalate dehydratase [Cyanidioschyzon merolae strain 10D]
Length = 512
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 261/416 (62%), Positives = 337/416 (81%), Gaps = 7/416 (1%)
Query: 49 VMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGS 108
+ AP ++ P+ +VK T+TEKI ++A+ + + PG+N++V+VD+LMTHDVCGPG+
Sbjct: 43 ISAPTSTKAAPSV--AVKAPQTITEKIIAKAAGRSFVKPGENLFVDVDVLMTHDVCGPGT 100
Query: 109 FGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDL 168
+FK+EFG +A VWD EKIVIIPDHYIFT+DE+ANRNVDI+RDF EQ I+YFYDI D
Sbjct: 101 IAVFKREFGSDAPVWDPEKIVIIPDHYIFTADEKANRNVDIIRDFAREQGIRYFYDITDR 160
Query: 169 GNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGT 228
+F+ANP+YKGVCHIALAQEGHCRPGEVL GTDSHTCTAGAFG+FATGIGNTDAGF++GT
Sbjct: 161 SDFRANPEYKGVCHIALAQEGHCRPGEVLFGTDSHTCTAGAFGEFATGIGNTDAGFIMGT 220
Query: 229 GKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEE 288
GK+L+KVP T+RF L+G +PDY++AKD+ILQIIG+I VAGATY++MEFV +E+ S+ +
Sbjct: 221 GKLLIKVPATMRFALNGTLPDYIMAKDIILQIIGDIGVAGATYRAMEFVSDRMEQFSIAD 280
Query: 289 RMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEP 348
RMTLCNM +EAGGKNG+ P D T Y+ +T+ P++ ++D ASF ++ ++D+SKLEP
Sbjct: 281 RMTLCNMAIEAGGKNGIFPPDEITCAYVRARTTKPFDVFHTDSNASFYTDRQYDLSKLEP 340
Query: 349 LVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVP 408
VAKPHSPDN LAR C+DVKI RVYIGSCTGGKTEDF+AAA++ G++V+VPTFLVP
Sbjct: 341 AVAKPHSPDNLDLARNCEDVKITRVYIGSCTGGKTEDFVAAARIL--DGRQVRVPTFLVP 398
Query: 409 ATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEP 464
AT++++ D+ T + GKT QIF++AGC P +PSC ACLGGPKDT+ R N P
Sbjct: 399 ATRRIYEDLETRKL---NGKTLMQIFKDAGCLPPGAPSCAACLGGPKDTFGRANGP 451
>gi|451981315|ref|ZP_21929677.1| 3-isopropylmalate dehydratase [Nitrospina gracilis 3/211]
gi|451761460|emb|CCQ90933.1| 3-isopropylmalate dehydratase [Nitrospina gracilis 3/211]
Length = 435
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/393 (62%), Positives = 299/393 (76%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + S K + PGDNVWV+VD+LMTHDVCGPG+ GIFKK+FGENAKVWDREK
Sbjct: 2 GMTITEKIIAAHSGKASVKPGDNVWVDVDVLMTHDVCGPGTIGIFKKQFGENAKVWDREK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VIIPDHYIFTSD ANRNVDI+R F EQ++ Y+YD+ +YKGVCH+ALAQ
Sbjct: 62 VVIIPDHYIFTSDPHANRNVDIIRAFAKEQDLPYYYDV-------GTDNYKGVCHVALAQ 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTCT+GAFG F+TGIGNTDA F+LGTGK+ +KVP T+RF G+
Sbjct: 115 EGHNRPGEVLFGTDSHTCTSGAFGMFSTGIGNTDAAFILGTGKLWVKVPETMRFEFRGQF 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y++AKD++LQ+IG+I GATY++ME+ G V LSMEERMTLCNM +EAGGKN V+
Sbjct: 175 PPYIMAKDILLQVIGDIGCDGATYRTMEWAGDAVMSLSMEERMTLCNMAIEAGGKNAVIE 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD TTF YLE + PY V D+ AS+ +D K+EP+VAKPHSPDNRALAREC D
Sbjct: 235 ADQTTFDYLETRNKKPYNVVSGDKDASYFFSKVYDADKMEPVVAKPHSPDNRALARECSD 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VK++R YIGSCTGGK DF+AAA++ G+KVK+ TF+VPAT +V ++ T + G
Sbjct: 295 VKLNRAYIGSCTGGKLTDFIAAAEIL--KGEKVKIGTFIVPATMEVEKELNTHKID---G 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
KT QIFEEAGC PSC ACLGGP DT+ R
Sbjct: 350 KTVMQIFEEAGCQI-GEPSCAACLGGPADTFGR 381
>gi|168701956|ref|ZP_02734233.1| homoaconitate hydratase family protein [Gemmata obscuriglobus UQM
2246]
Length = 435
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/409 (60%), Positives = 305/409 (74%), Gaps = 15/409 (3%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+AMT+TEKI +RAS K Q +PG+NVW NVD+LMTHDVCGPG+FG+FKKEFG +AKVWD+E
Sbjct: 2 SAMTMTEKILARASGKAQAAPGENVWANVDVLMTHDVCGPGTFGVFKKEFGPDAKVWDKE 61
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+V+IPDHYIFT D ANRNVD+LR F EQ+IKYFYD+ YKGVCHIAL
Sbjct: 62 KLVLIPDHYIFTKDAMANRNVDVLRQFAKEQDIKYFYDV-------GTKSYKGVCHIALP 114
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+EGH RPGEVLLGTDSHTCTAGAFG+FATGIGNTDAGFVLGTGK+ LKVPPT+RFV G
Sbjct: 115 EEGHTRPGEVLLGTDSHTCTAGAFGEFATGIGNTDAGFVLGTGKLWLKVPPTMRFVFHGN 174
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P YL+AKDLIL +IG+I V GATY++MEF G V L++EERMTLCNM +EAGGKNG++
Sbjct: 175 LPPYLMAKDLILAVIGDIGVDGATYRAMEFDGDGVYALNIEERMTLCNMAIEAGGKNGII 234
Query: 307 PADGTTFKYLEDKTS--LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
AD T Y+ + + PY V SD A F+ E +D+SKLEP++AKPHSPDN+A +
Sbjct: 235 AADQVTLDYVNKRNAGNRPYTVVKSDPGAQFVFEKVYDVSKLEPVIAKPHSPDNKAFVSQ 294
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
K K+DR YIGSCTGGK DF AAA+ L +GK VK+ TF+VPAT +V + T +
Sbjct: 295 VKGTKLDRAYIGSCTGGKLTDFKAAAQ--LLNGKTVKIDTFVVPATTEVARGLDTETI-- 350
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
GG++ IF AG SC ACLGGP DT+ R+N P++ + ++
Sbjct: 351 -GGRSLRDIFLSAGAKI-GDASCAACLGGPSDTFGRLNAPISCISTTNR 397
>gi|383766918|ref|YP_005445899.1| 3-isopropylmalate dehydratase large subunit [Phycisphaera
mikurensis NBRC 102666]
gi|381387186|dbj|BAM04002.1| 3-isopropylmalate dehydratase large subunit [Phycisphaera
mikurensis NBRC 102666]
Length = 477
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/423 (55%), Positives = 300/423 (70%), Gaps = 29/423 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TE+IF+R S + ++SPGDNVWV+VD+LMTHDVCGPG+ GIFKKEFG +AKVWD +I
Sbjct: 1 MTMTEQIFARHSGRSEVSPGDNVWVDVDVLMTHDVCGPGTIGIFKKEFGADAKVWDPTRI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIK----DLGNFKANP-------DY 177
IIPDHYIFT+D + +RNV ILRDF EQ + Y+YD D G+ NP Y
Sbjct: 61 PIIPDHYIFTADGKCHRNVQILRDFVKEQGLPYYYDPDFLDTDEGSGFPNPYRDPTRTSY 120
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
KGVCH AL +EGHCRPGE+LLGTDSHTCTAGAFGQFA+G+GNTDA FV+GTGK LK PP
Sbjct: 121 KGVCHKALPEEGHCRPGEILLGTDSHTCTAGAFGQFASGVGNTDAAFVMGTGKTWLKTPP 180
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
T++F GE+P YL AKDLIL +IG+I VAGATY++M F G + L++E+RMTL NM +
Sbjct: 181 TMKFTFHGEIPPYLTAKDLILAVIGQIGVAGATYRAMYFAGEGIGSLTLEDRMTLTNMAI 240
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP 356
EAGGKNG+ D T Y+ +++ P +E V DE A ++ E+ +D+ +EP++AKPHSP
Sbjct: 241 EAGGKNGICDVDQKTLDYVRARSNRPEWEVVVEDEGAEYIYEHAWDLGLMEPMIAKPHSP 300
Query: 357 DNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMD 416
DN+ LAR DVK+DR YIGSCTGGK D + AA + G++V +PT++VP + +V +
Sbjct: 301 DNKDLARNLSDVKLDRAYIGSCTGGKITDMVMAANIL--DGEEVAIPTYVVPGSTEVHQN 358
Query: 417 VYTL-------------PVPGSGG-KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
+ TL P+ G KT + E AGC+ A+ SC ACLGGP DT+ R+N
Sbjct: 359 MLTLGLDGEPCRHDDRTPIAGRESVKTVYEALEGAGCNMGAA-SCAACLGGPVDTFGRLN 417
Query: 463 EPM 465
EPM
Sbjct: 418 EPM 420
>gi|269118749|ref|YP_003306926.1| homoaconitate hydratase family protein [Sebaldella termitidis ATCC
33386]
gi|268612627|gb|ACZ06995.1| homoaconitate hydratase family protein [Sebaldella termitidis ATCC
33386]
Length = 435
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/395 (55%), Positives = 291/395 (73%), Gaps = 13/395 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI ++ S K ++ PG+N+WVNVD+LMTHDV GPGS IFKK FGENAKVW+ EK
Sbjct: 2 GMTIVEKILAKKSGKDEVKPGENIWVNVDVLMTHDVTGPGSMAIFKKNFGENAKVWNNEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++PDHYIFT +E A RN++ + F +EQ +KYFY YKGVCH ALAQ
Sbjct: 62 IVLVPDHYIFTKNEHAMRNIEYVNQFAVEQELKYFYP-------PFTNKYKGVCHTALAQ 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EGH RPGEVL GTDSHTCTAGAFG+FATGIGNTDA F+LGTGK+ +KVP T+RF +G+
Sbjct: 115 EGHTRPGEVLFGTDSHTCTAGAFGEFATGIGNTDAAFILGTGKLWVKVPETMRFTFEGKF 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+Y++ KD++L++IG+I GATYK M+F G + +MEERMT+CNM +EAGGK G++
Sbjct: 175 PEYVMGKDVVLKVIGDIGFDGATYKCMQFDGDAIHGFNMEERMTICNMAIEAGGKCGIIE 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+ +KT P+E +YSD+ A + +EY+++ +++EP+VAKP +P N LA+ D
Sbjct: 235 PDEITVEYVTEKTDKPFELIYSDKDADYSAEYKYNANEMEPIVAKPFNPGNTDLAKNLGD 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VK+DR YIGSCTGGKT DF+AAAK+ G+KV + TF+VP+T KV + + + G
Sbjct: 295 VKLDRAYIGSCTGGKTTDFVAAAKIL--KGRKVAIETFIVPSTVKVEEALSKIIID---G 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
+TC +IFE+AGC PSC ACLGGP DT+ R +
Sbjct: 350 ETCMEIFEKAGCKI-GPPSCAACLGGPVDTFGRTH 383
>gi|268316308|ref|YP_003290027.1| homoaconitate hydratase family protein [Rhodothermus marinus DSM
4252]
gi|345303977|ref|YP_004825879.1| homoaconitate hydratase family protein [Rhodothermus marinus
SG0.5JP17-172]
gi|262333842|gb|ACY47639.1| homoaconitate hydratase family protein [Rhodothermus marinus DSM
4252]
gi|345113210|gb|AEN74042.1| homoaconitate hydratase family protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 432
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/395 (55%), Positives = 291/395 (73%), Gaps = 13/395 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI +R + + +++PG+N+W++VDILMTHDVCGP + IFK+EFG NA+VWDREK
Sbjct: 2 GMTITEKILARHAGRDRVTPGENIWISVDILMTHDVCGPPTIEIFKREFGPNARVWDREK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VI+PDHYIFT+D A RN++ILR+F EQ++ Y+YD+ YKGVCH+ALA+
Sbjct: 62 VVILPDHYIFTADPHARRNIEILREFAREQDLPYYYDV-------GTSRYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG RPG VL+GTDSHTCT+GAFG F+TG+GNTDA F++GTGK+ +KVP T+RF+ +G +
Sbjct: 115 EGFNRPGIVLIGTDSHTCTSGAFGLFSTGVGNTDAAFIMGTGKIWVKVPETMRFIFEGSL 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P YL+AKDLIL IIG+I + GATY++MEF G V LS+EERMTL NM +EAGGK+G++
Sbjct: 175 PPYLMAKDLILAIIGDIGIDGATYRAMEFDGEAVYDLSIEERMTLTNMAIEAGGKSGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+ ++T P+E +SD A + SEY +D+SKLEP+VAKPH PDNRA E
Sbjct: 235 PDEKTIAYVRERTDAPFEIYHSDPDARYHSEYVYDVSKLEPVVAKPHRPDNRATVTEVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
K+DR YIGSCTGGK EDF+AAA++ G++V++ TF+VPA+ V ++ + G
Sbjct: 295 TKLDRAYIGSCTGGKLEDFIAAARIL--KGQEVRIDTFVVPASTYVEQQLHHYKIDGV-- 350
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
+ IF AGC SCGACLGGP DT+ R +
Sbjct: 351 -SLYDIFVNAGCKI-GHASCGACLGGPPDTFGRTH 383
>gi|78189855|ref|YP_380193.1| 3-isopropylmalate dehydratase [Chlorobium chlorochromatii CaD3]
gi|78172054|gb|ABB29150.1| 3-isopropylmalate dehydratase [Chlorobium chlorochromatii CaD3]
Length = 431
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 283/393 (72%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KIF++++++P + PG++VW+NVD+L+THDVCGP + IFK++FG NAKVWD EK
Sbjct: 2 AQTITQKIFAKSAKRPFVDPGESVWLNVDVLLTHDVCGPPTIDIFKEKFGSNAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++I+PDHYIFT++E A+RN+D+LR F EQ + ++YD+ YKGVCH+ALA+
Sbjct: 62 VIILPDHYIFTANEHAHRNIDLLRQFAKEQGLPHYYDV-------GTDRYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F TGIGNTDA F+LGTGK+ KVP +++F +GEM
Sbjct: 115 EGFNLPGTVLFGTDSHTCTSGAFGMFGTGIGNTDAAFILGTGKLWEKVPESMKFTFEGEM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P YL AKDLILQI+G+I+ GATY++MEF G + L MEERMTL NM +EAGG NG++
Sbjct: 175 PAYLTAKDLILQILGDITTDGATYRAMEFDGEAIFSLPMEERMTLTNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD +Y++ +T PYE SD A + S YR+++ LEP+VA+PHSPDNRA R
Sbjct: 235 ADNIAEEYVKARTKKPYEIFQSDPDAKYHSTYRYNVRDLEPVVAQPHSPDNRATVRSVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
KI + YIGSCTGGK DF+ AAK+ G+KV V T +VPAT V +L G
Sbjct: 295 TKITKSYIGSCTGGKLSDFMMAAKIL--KGQKVTVTTTIVPATTLV---ARSLETEQYDG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
K+ QIFEEAGC+ A PSC ACLGGP DT R
Sbjct: 350 KSLKQIFEEAGCNV-ALPSCAACLGGPADTVGR 381
>gi|119356679|ref|YP_911323.1| homoaconitate hydratase family protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354028|gb|ABL64899.1| homoaconitate hydratase family protein [Chlorobium phaeobacteroides
DSM 266]
Length = 431
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/393 (56%), Positives = 280/393 (71%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KI SRA+ + + G+NVW+NVDIL+THDVCGP +F IFK+EFG +AKVWD EK
Sbjct: 2 AQTITQKILSRAANRKFVDAGENVWLNVDILLTHDVCGPPTFDIFKQEFGPDAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A+RN+D+LR F EQ++ +YD+ YKGVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHAHRNIDLLRQFAREQSLPNYYDV-------GTKRYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP +++F DG+M
Sbjct: 115 EGFNIPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPESMKFTFDGQM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLIL I+G+I GATY++MEF G V L +EERMTL NM +EAGG NG++
Sbjct: 175 PEYLTAKDLILHILGDIGTDGATYRAMEFDGEAVFSLPIEERMTLTNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y+ +T PYE SD A + S Y +++ +LEP+VA PHSPDNRA R +
Sbjct: 235 ADAITEAYVNARTQKPYELFRSDPDARYHSSYTYNVRELEPVVACPHSPDNRATVRSVQG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
I R YIGSCTGGK DF+ AAK+ +GKKV VPT +VPAT KV D L + G
Sbjct: 295 TAITRSYIGSCTGGKLSDFMMAAKIL--NGKKVSVPTNIVPATVKVAAD---LAIEQYEG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+T QIFE+AGC A PSC ACLGGP DT R
Sbjct: 350 RTLKQIFEDAGCSI-ALPSCAACLGGPSDTVGR 381
>gi|373456603|ref|ZP_09548370.1| homoaconitate hydratase family protein [Caldithrix abyssi DSM
13497]
gi|371718267|gb|EHO40038.1| homoaconitate hydratase family protein [Caldithrix abyssi DSM
13497]
Length = 432
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/392 (56%), Positives = 277/392 (70%), Gaps = 13/392 (3%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI ++++ K ++ PG+NVW+NVD+LMTHDVCGP +F I ++EFGE A+VWD+EK+
Sbjct: 3 MTITEKILAKSAGKKEVRPGENVWLNVDVLMTHDVCGPPTFQIMEREFGEKARVWDKEKV 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI PDHYIFT+D ANRNV+ILR++ + + +YD+ YKGVCHIALA+E
Sbjct: 63 VIFPDHYIFTADAHANRNVNILREYAQKYQLPNYYDV-------GTERYKGVCHIALAEE 115
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G+ RPG VL+GTDSHTCTAGAFG FATG+GNTDA FVLGTGK+ KVP +++F+ +GEMP
Sbjct: 116 GYDRPGTVLIGTDSHTCTAGAFGLFATGVGNTDAAFVLGTGKIWEKVPESMKFIFEGEMP 175
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
YL AKDLILQI+G+I+ GATY++MEF G V L+++ERMTL NM VEAGG NG++
Sbjct: 176 QYLTAKDLILQILGDITTDGATYRAMEFDGHAVHNLNIDERMTLTNMAVEAGGMNGIIAV 235
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D YL K Y+ SD A + S YR+D+ K+EP+VA PHSPDNR LAR
Sbjct: 236 DEVVRTYLAQKDIFDYDEFESDADARYHSVYRYDVQKMEPVVAMPHSPDNRELARNVAGT 295
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KI R YIGSCTGGK DF AK+ GKKVK PTF+VPA+ V + + GS
Sbjct: 296 KITRCYIGSCTGGKFTDFYNVAKIL--QGKKVKAPTFVVPASTAVARRLREESLNGS--- 350
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
T QI +AGC A SC ACLGGP DT R
Sbjct: 351 TIEQILLDAGC-VIAPSSCAACLGGPADTVGR 381
>gi|194333572|ref|YP_002015432.1| homoaconitate hydratase family protein [Prosthecochloris aestuarii
DSM 271]
gi|194311390|gb|ACF45785.1| homoaconitate hydratase family protein [Prosthecochloris aestuarii
DSM 271]
Length = 432
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 286/393 (72%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KI +RA+ + ++ G+NVW+NVDIL+THDVCGP +F IFK++FG +AKVWD EK
Sbjct: 2 AQTITQKILARAANRKFVNAGENVWLNVDILLTHDVCGPPTFDIFKEKFGPDAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT +E A+RN+D+LR F EQN+ +YD+ YKGVCH+ALAQ
Sbjct: 62 VVVLPDHYIFTENEHAHRNIDLLRTFAAEQNLPNYYDV-------GTDRYKGVCHVALAQ 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F TGIGNTDA F+LGTGK+ KVP +++FV DG M
Sbjct: 115 EGFNLPGTVLFGTDSHTCTSGAFGMFGTGIGNTDAAFILGTGKLWEKVPESMKFVFDGAM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDYL AKDLILQI+G+I GATY++MEF G+ V +L +EERMTL NM +EAGG NG++
Sbjct: 175 PDYLTAKDLILQILGDIGTDGATYRAMEFDGSAVYQLPVEERMTLTNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y++ +TS PYE +SD A + S Y +++ +LEP+VA+PHSPDNRA R +
Sbjct: 235 ADEVTEAYVKARTSKPYEIFHSDPDAIYHSIYHYNVEELEPVVAQPHSPDNRATVRSVQG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+I + YIGSCTGGK DF AAK+ +G++V + T +VPAT +V +L G
Sbjct: 295 TRITKSYIGSCTGGKLSDFKMAAKIL--NGQQVSIQTNIVPATVEV---AKSLETEQYEG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
K+ ++ E+AGC T A PSC ACLGGP DT+ R
Sbjct: 350 KSIRKVLEDAGC-TIAQPSCAACLGGPADTFGR 381
>gi|145219980|ref|YP_001130689.1| homoaconitate hydratase family protein [Chlorobium phaeovibrioides
DSM 265]
gi|145206144|gb|ABP37187.1| homoaconitate hydratase family protein [Chlorobium phaeovibrioides
DSM 265]
Length = 431
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/391 (56%), Positives = 281/391 (71%), Gaps = 13/391 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+T+KI +RA+ + ++ G+NVW+NVD+L+THDVCGP +F IF +EFGE A+VWD EK+V
Sbjct: 4 TITQKILARAANRKFVNAGENVWLNVDVLLTHDVCGPPTFDIFNQEFGEGARVWDPEKVV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDHYIFT++E A+RN+D+LR F EQN+ +YD+ Y+GVCH+ALA+EG
Sbjct: 64 VLPDHYIFTANEHAHRNIDLLRKFAKEQNLPNYYDV-------GTDRYRGVCHVALAEEG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP ++ F DGEMP+
Sbjct: 117 FNLPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPESMLFTFDGEMPE 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
YL AKDLILQI+G+I GATY++MEF G + L MEERMTL NM +E GG NG++ D
Sbjct: 177 YLSAKDLILQILGDIGTDGATYRAMEFNGEAIHSLPMEERMTLTNMAIEGGGMNGIIAVD 236
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ KTS PYE SD A++ S+ R++ S++EP+VAKPHSPDNRA + K K
Sbjct: 237 EITEAFVKSKTSKPYEIFTSDPGAAYFSKTRYNASEMEPVVAKPHSPDNRATVQSMKGTK 296
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + YIGSCTGGK DF AAK+ SGK+V VPT +VPAT KV D+ T GK+
Sbjct: 297 ITKSYIGSCTGGKLADFKLAAKIL--SGKRVSVPTNIVPATVKVAHDLETELY---NGKS 351
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
IFE+AGC A PSC ACLGGP DT R
Sbjct: 352 LKSIFEDAGCSI-ALPSCAACLGGPTDTVGR 381
>gi|310778959|ref|YP_003967292.1| homoaconitate hydratase family protein [Ilyobacter polytropus DSM
2926]
gi|309748282|gb|ADO82944.1| homoaconitate hydratase family protein [Ilyobacter polytropus DSM
2926]
Length = 432
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 293/394 (74%), Gaps = 13/394 (3%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI ++ S K ++ PG+N+WV+VD L+THDVCGPG+ IFK+EFGENAKVWD+EK+
Sbjct: 1 MTIVEKILAKKSNKERVVPGENIWVDVDNLLTHDVCGPGAASIFKREFGENAKVWDKEKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++IPDHYIFT D+ A RN++I+++F EQ++KY+Y+ DYKGVCHIA A+E
Sbjct: 61 ILIPDHYIFTKDKYAMRNLEIVKEFAKEQDLKYYYE-------PFTSDYKGVCHIAFAEE 113
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH PG+V+ GTDSHTCTAGAFGQFATGIGNTDAGF+LGTG++ +KVP T+RF +G+ P
Sbjct: 114 GHAMPGKVMFGTDSHTCTAGAFGQFATGIGNTDAGFILGTGRLWVKVPETIRFTFNGKFP 173
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y++ KD++LQ IG+I GATY M++ G + L+M+ERMT+CNM +EAGGK G++
Sbjct: 174 KYVMGKDIVLQTIGDIGFDGATYCCMQYDGEAIGDLNMDERMTICNMAIEAGGKCGIIEP 233
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TT Y++ +T P++ +SD A++ SE+ ++ +++EP+VA+P+SP N A+ +DV
Sbjct: 234 DQTTIDYVKARTDAPFDVYHSDADATYKSEHIYEAAEMEPVVAQPYSPANVEKAKNLEDV 293
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KI R YIGSCTGGKT DF AAA++ G+K V TF+VPAT KV D+ + + G +
Sbjct: 294 KITRSYIGSCTGGKTTDFYAAAEIL--KGRKTVVDTFIVPATTKVEKDLNEIKI---GDE 348
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
T +I E+AGC PSCGACLGGP+DT+ R +
Sbjct: 349 TLMEILEKAGC-LIGPPSCGACLGGPEDTFGRTH 381
>gi|302801325|ref|XP_002982419.1| hypothetical protein SELMODRAFT_421784 [Selaginella moellendorffii]
gi|300150011|gb|EFJ16664.1| hypothetical protein SELMODRAFT_421784 [Selaginella moellendorffii]
Length = 336
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/368 (62%), Positives = 256/368 (69%), Gaps = 77/368 (20%)
Query: 99 MTHDVCGPGSFGIFKKEFGENA----KVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
MTH+VCGPG GIFKKEFG N +VWDREKIVIIPDHYIFT+DERANRNVDIL DF
Sbjct: 1 MTHNVCGPGPIGIFKKEFGANGEMCPQVWDREKIVIIPDHYIFTADERANRNVDILGDFS 60
Query: 155 MEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 214
EQ+IKYFYDI D G+F+ANPDYKGVCH+ALAQEGHC PGEVL GTDSHTCTAGA GQFA
Sbjct: 61 KEQSIKYFYDITDRGDFRANPDYKGVCHVALAQEGHCSPGEVLFGTDSHTCTAGASGQFA 120
Query: 215 TGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSM 274
TGIGNTDAGF++GTG LLK QIIGEI+V+GATYKSM
Sbjct: 121 TGIGNTDAGFIMGTGIFLLKAS---------------------TQIIGEITVSGATYKSM 159
Query: 275 EFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKAS 334
EFV T VER+
Sbjct: 160 EFVKTAVERM-------------------------------------------------- 169
Query: 335 FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFL 394
+EYR D+SKLEP+VAKPHSPD RALAR CKDVKIDRVYIGSCTGGKTED + AAK+
Sbjct: 170 --TEYRTDVSKLEPVVAKPHSPDKRALARNCKDVKIDRVYIGSCTGGKTEDVVVAAKLLN 227
Query: 395 ASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
+G+KVKVPTFLVPATQKVW+D+Y +P+P + GKTC+QIFEEAGCDTP SPSC ACLGGP
Sbjct: 228 KAGQKVKVPTFLVPATQKVWVDLYAMPLPEADGKTCAQIFEEAGCDTPTSPSCAACLGGP 287
Query: 455 KDTYARMN 462
KDT ++
Sbjct: 288 KDTLEKLQ 295
>gi|189346268|ref|YP_001942797.1| homoaconitate hydratase family protein [Chlorobium limicola DSM
245]
gi|189340415|gb|ACD89818.1| homoaconitate hydratase family protein [Chlorobium limicola DSM
245]
Length = 431
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/393 (55%), Positives = 281/393 (71%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KI SRA+ + + G+NVW+NVDIL+THDVCGP +F IFK+EFG +AKVWD EK
Sbjct: 2 AQTITQKILSRAANRKFVDAGENVWLNVDILLTHDVCGPPTFDIFKQEFGPDAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A+RN+D+LR F EQ++ +YD+ YKGVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHAHRNIDLLRQFASEQSLPNYYDV-------GTDRYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP +++F+ +G+M
Sbjct: 115 EGFNIPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPESMKFIFEGDM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLILQI+G+I GATY++MEF G V L ++ERMTLCNM +EAGG NG++
Sbjct: 175 PEYLCAKDLILQILGDIGTDGATYRAMEFDGEAVYSLPVDERMTLCNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y++ +S PYE SD A + S YR++ +LEP+VAKPHSPDNRA R +
Sbjct: 235 ADAVTEAYVKAHSSKPYEIFQSDPDADYHSVYRYNARELEPVVAKPHSPDNRATVRSMQG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
KI + YIGSCTGGK DF+ AAK+ GK+V VPT +VPAT V L G
Sbjct: 295 TKITKSYIGSCTGGKLTDFMLAAKIL--KGKQVTVPTNIVPATVLV---ARALECETWEG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
T +IFE+AGC A PSC ACLGGP DT R
Sbjct: 350 VTLKKIFEDAGCSI-ALPSCAACLGGPADTVGR 381
>gi|189218757|ref|YP_001939398.1| 3-isopropylmalate dehydratase large subunit [Methylacidiphilum
infernorum V4]
gi|189185615|gb|ACD82800.1| 3-isopropylmalate dehydratase large subunit [Methylacidiphilum
infernorum V4]
Length = 455
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/418 (53%), Positives = 288/418 (68%), Gaps = 23/418 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI ++AS++ ++SPGDN+WV+ DIL+THDVCGPG+ G+F +EFG+ A+VWD KI
Sbjct: 1 MTLTEKILAKASKRSRVSPGDNIWVDADILLTHDVCGPGTIGVFYREFGKKARVWDPYKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD--LGNFKANP----------- 175
V++PDHYIFT+D +NRNVD+LR F EQ I YFYD+ D G +K +P
Sbjct: 61 VMMPDHYIFTADSLSNRNVDVLRAFAEEQGIVYFYDVIDDPRGTWKFDPAKGYFRRQYGT 120
Query: 176 DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKV 235
Y GVCH AL ++GH RPGEVL GTDSHTCTAGAF +FATGIGNTDAGFV+GTGK+L+KV
Sbjct: 121 KYAGVCHTALPEKGHVRPGEVLFGTDSHTCTAGAFNEFATGIGNTDAGFVMGTGKLLIKV 180
Query: 236 PPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNM 295
PPTL+F LDGE+ ++AKDLIL IIGEI GATY +M+F G V L +E+RMT+ NM
Sbjct: 181 PPTLQFYLDGELQKGVMAKDLILHIIGEIGFDGATYMAMQFEGPGVSTLEIEDRMTVANM 240
Query: 296 VVEAGGKNGVVPADGTTF-----KYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
+EAG KNG+ PAD T K L++ T +E V D+ F + Y D+S +EP V
Sbjct: 241 AIEAGAKNGIFPADQKTIDFVRQKVLKNGTKKEFEVVDPDKDQHFFASYFIDLSLVEPTV 300
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
A PH+P NR A+E VKIDR Y+GSCTGGK DF+A A + + V V TF VP+T
Sbjct: 301 AAPHNPGNRMKAKELGSVKIDRAYLGSCTGGKLSDFIAFASIL--KNRTVSVETFAVPST 358
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASL 468
+V ++ + + GK+ EAG +PSC ACLGGP DT+ R+N+P+ +
Sbjct: 359 PEVVDQLHKIEIE---GKSIWDTLREAGVQITENPSCAACLGGPMDTFGRVNKPLVCI 413
>gi|384915766|ref|ZP_10015975.1| 3-isopropylmalate dehydratase [Methylacidiphilum fumariolicum SolV]
gi|384526846|emb|CCG91846.1| 3-isopropylmalate dehydratase [Methylacidiphilum fumariolicum SolV]
Length = 455
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/418 (53%), Positives = 290/418 (69%), Gaps = 23/418 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI ++AS++ ++ PGDN+WV DIL+THDVCGPG+ G+FK+EFG+NA+VW+ KI
Sbjct: 1 MTLTEKILAKASKRSKVLPGDNIWVETDILLTHDVCGPGTIGVFKREFGKNARVWNPYKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD--LGNFKANP----------- 175
VI+PDHYIFTSD +NRNVDILR F EQ + YFYD+ D GN+K +P
Sbjct: 61 VIMPDHYIFTSDSLSNRNVDILRAFSKEQGLPYFYDVIDDPNGNWKFDPLKGPLQRQYGM 120
Query: 176 DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKV 235
Y GVCH AL ++GH RPGEVL GTDSHTCTAGAF QFATGIGNTDAGFV+GTGK+L+KV
Sbjct: 121 HYAGVCHTALPEKGHVRPGEVLFGTDSHTCTAGAFNQFATGIGNTDAGFVMGTGKLLIKV 180
Query: 236 PPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNM 295
PPT++F LDGE+ ++AKDLIL IIGEI GATY +M+F G LS+E+RMT+ NM
Sbjct: 181 PPTIQFYLDGELQKGVMAKDLILYIIGEIGFDGATYMAMQFEGPGAFSLSIEDRMTMANM 240
Query: 296 VVEAGGKNGVVPADGTTFKY-----LEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
+EAG KNG+ PAD T Y L++ T +E V ++ F + Y D+SK+EP V
Sbjct: 241 AIEAGAKNGIFPADQKTIDYVNQRILKNGTKKEFEVVELEKDQKFFASYSIDLSKIEPTV 300
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
A P +P NR A+E VKIDR Y+GSCTGGK DF+A A + V V TF VP+T
Sbjct: 301 AAPPNPANRFKAKELASVKIDRAYLGSCTGGKLTDFIAFASIL--KNNMVSVETFAVPST 358
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASL 468
+V ++ + + G++ +I +AG +PSC ACLGGP DT+ R+N+P+ +
Sbjct: 359 PEVVDQLHKIELE---GQSLWEILVQAGVKITENPSCAACLGGPMDTFGRVNKPLVCI 413
>gi|21673449|ref|NP_661514.1| 3-isopropylmalate dehydratase large subunit [Chlorobium tepidum
TLS]
gi|21646552|gb|AAM71856.1| 3-isopropylmalate dehydratase, large subunit, putative [Chlorobium
tepidum TLS]
Length = 431
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/393 (55%), Positives = 278/393 (70%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KIF+RA+ + + PG +VW+NVD+L+THDVCGP +F IFK+EFG NAKVWD K
Sbjct: 2 AQTITQKIFARAANRKFVDPGQSVWLNVDVLLTHDVCGPPTFDIFKQEFGPNAKVWDPSK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A+RN+D+LR F EQ + +YD+ Y+GVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHAHRNIDLLRQFAAEQGLPNYYDV-------GTDRYRGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP +++F +G+M
Sbjct: 115 EGFNLPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPDSMKFTFEGQM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLILQI+G+I+ GATY++MEF G V L ++ERMTLCNM +EAGG NG++
Sbjct: 175 PEYLTAKDLILQILGDITTDGATYRAMEFDGEAVYSLPIDERMTLCNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T +++ +TS PYE SD A + S YR+++ K+EP+VAKPHSPDNRA
Sbjct: 235 ADAVTEAFVKARTSKPYEIFTSDPDAQYHSMYRYNVEKMEPIVAKPHSPDNRATVHSVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + YIGSCTGGK DF AAK+ GKKV V T +VPAT V L G
Sbjct: 295 TPITKSYIGSCTGGKLTDFKLAAKIL--KGKKVAVTTNIVPATVLV---ASQLETEMYDG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+T IFEEAGC+ A PSC ACLGGP DT R
Sbjct: 350 QTLRHIFEEAGCNI-ALPSCAACLGGPSDTVGR 381
>gi|194337201|ref|YP_002018995.1| homoaconitate hydratase family protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309678|gb|ACF44378.1| homoaconitate hydratase family protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 431
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 280/393 (71%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KI S+A+ + + G++VW+NVDIL+THDVCGP +F IFK+EFG +AKVWD K
Sbjct: 2 AQTITQKILSKAANRKFVDAGESVWLNVDILLTHDVCGPPTFDIFKQEFGADAKVWDPRK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A+RN+D+LR F EQ ++++YD+ YKGVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHAHRNIDLLRQFAKEQQLEHYYDV-------GTDRYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP ++ F DG+M
Sbjct: 115 EGFNLPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPESILFTFDGQM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLILQI+G+I+ GATY +MEF G + L MEERMTL NM +EAGG NG++
Sbjct: 175 PEYLTAKDLILQILGDITTDGATYCAMEFDGEAIFSLPMEERMTLTNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD Y++ ++ PYE SD A + S+YR+D+ LEP+VA+PHSPDNRA R +
Sbjct: 235 ADSIAENYVKARSQKPYELFQSDPDARYHSKYRYDVRTLEPVVAQPHSPDNRATVRSVQG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
KI + YIGSCTGGK DF+ AAK+ G KV V T +VPAT KV D L G
Sbjct: 295 TKITKSYIGSCTGGKLTDFMMAAKIL--KGHKVSVTTNIVPATVKVARD---LECELYDG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
++ QIFE+AGC T A PSC ACLGGP DT R
Sbjct: 350 QSLKQIFEDAGC-TIALPSCAACLGGPADTVGR 381
>gi|193212297|ref|YP_001998250.1| homoaconitate hydratase family protein [Chlorobaculum parvum NCIB
8327]
gi|193085774|gb|ACF11050.1| homoaconitate hydratase family protein [Chlorobaculum parvum NCIB
8327]
Length = 431
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/393 (55%), Positives = 280/393 (71%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KIF++A+ + + PG +VW+NVD+L+THDVCGP +F IFK+EFG +AKVWD EK
Sbjct: 2 AQTITQKIFAKAANRKFVDPGQSVWLNVDVLLTHDVCGPPTFDIFKQEFGPDAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A+RN+D+LR F EQ++ +YD+ Y+GVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHAHRNIDLLRKFAAEQHLPNYYDV-------GTDRYRGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP +++F +G+M
Sbjct: 115 EGFNLPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPDSMKFTFEGQM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLILQI+G+I GATY++MEF G V L ++ERMTLCNM +EAGG NG++
Sbjct: 175 PEYLTAKDLILQILGDIGTDGATYRAMEFDGEAVYSLPIDERMTLCNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T +++ +TS PYE SD A + S YR+++ KLEP+VA+PHSPDNRA R
Sbjct: 235 ADAVTEAFVKARTSKPYEIFQSDPDAQYHSMYRYNVEKLEPVVAQPHSPDNRATVRSVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + YIGSCTGGK DF AAK+ GKKV V T +VPAT V L G
Sbjct: 295 TPITKSYIGSCTGGKITDFRLAAKIL--KGKKVAVTTNIVPATVLV---ASQLENEMYDG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+T IFEEAGC+ A PSC ACLGGP DT R
Sbjct: 350 QTLRHIFEEAGCNI-ALPSCAACLGGPSDTVGR 381
>gi|78186484|ref|YP_374527.1| 3-isopropylmalate dehydratase [Chlorobium luteolum DSM 273]
gi|78166386|gb|ABB23484.1| 3-isopropylmalate dehydratase [Chlorobium luteolum DSM 273]
Length = 431
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/393 (55%), Positives = 277/393 (70%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+T+KI SRA+ + + G+NVW+NVDIL+THDVCGP +F IF +EFG AKVWD EK
Sbjct: 2 AQTITQKILSRAANRKFVDAGENVWLNVDILLTHDVCGPPTFDIFNQEFGLGAKVWDPEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDHYIFT++E A RN+D+LR F EQ++ ++YD+ YKGVCH+ALA+
Sbjct: 62 VVVLPDHYIFTANEHARRNIDLLRKFAAEQHLPHYYDV-------GTERYKGVCHVALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG VL GTDSHTCT+GAFG F +GIGNTDA F+LGTGK+ KVP +++F DG+M
Sbjct: 115 EGFNIPGTVLFGTDSHTCTSGAFGMFGSGIGNTDAAFILGTGKLWEKVPESMKFTFDGQM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P YL AKDLILQI+G+I GATY+++EF G + L MEERMTL NM +EAGG NG++
Sbjct: 175 PAYLTAKDLILQILGDIGTDGATYRALEFDGDAIHSLPMEERMTLTNMAIEAGGMNGIIA 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +++ +T+ YE +SD A + S YR+D SKLEP+VAKPHSPDNRA R
Sbjct: 235 VDEITEAFVKARTTKSYEIFHSDPDAKYHSLYRYDASKLEPVVAKPHSPDNRATVRSVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + YIGSCTGGK DF AA++ +G+KV V T +VPAT +V D L G
Sbjct: 295 TPITKSYIGSCTGGKLTDFKMAARIL--NGRKVAVTTNIVPATVQVARD---LEQEMHEG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
KT QIF EAGC+ A PSC ACLGGP DT R
Sbjct: 350 KTLKQIFMEAGCNI-ALPSCAACLGGPADTVGR 381
>gi|196230479|ref|ZP_03129341.1| aconitate hydratase domain protein [Chthoniobacter flavus Ellin428]
gi|196225409|gb|EDY19917.1| aconitate hydratase domain protein [Chthoniobacter flavus Ellin428]
Length = 456
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/415 (54%), Positives = 286/415 (68%), Gaps = 23/415 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEK+ +RAS K + G+NVWVNVD+LMTHDVCGPG+ G+FK+EFG+ AKVWD +K+
Sbjct: 1 MTLTEKVLARASGKAHVQAGENVWVNVDVLMTHDVCGPGTIGVFKREFGKAAKVWDPKKL 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD--LGNFKANPD---------- 176
VIIPDHYIFT+D +NRNVDILR+F EQ + YFYD+ D G++K + +
Sbjct: 61 VIIPDHYIFTADSMSNRNVDILREFAREQGLPYFYDVIDDPNGHWKFDTEQGQLKKQYGK 120
Query: 177 -YKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKV 235
Y GVCH L +GH RPGEVL GTDSHTC AGAF +FATGIGNTDAGF+LGTGK+L+KV
Sbjct: 121 SYTGVCHTTLPWKGHTRPGEVLFGTDSHTCMAGAFNEFATGIGNTDAGFILGTGKLLVKV 180
Query: 236 PPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNM 295
P T+RF L+GE+P ++AKD+IL +IG+I GATY++M++ G V +SM++RMT+ NM
Sbjct: 181 PETMRFFLEGELPAGVMAKDVILHVIGDIGFDGATYRAMQWEGPGVYGMSMDDRMTIANM 240
Query: 296 VVEAGGKNGVVPADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
+EAGGKNG+ P D T Y++D+ T +EP D+ F+ + FD+SKLEP V
Sbjct: 241 AIEAGGKNGIFPFDEKTDAYVKDRVQENGTKSTFEPAEIDQDQKFIYDKVFDLSKLEPTV 300
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
A P R A+E V +DR YIGSCTGGKT DFLA A+V GK VK+ TF VPAT
Sbjct: 301 ACHPDPGQRKTAKELAGVSLDRAYIGSCTGGKTSDFLAFARV--VKGKSVKIDTFGVPAT 358
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
KV V L G++ I E AG + SC ACLGGP DT+ RMN P+
Sbjct: 359 TKV---VQELKDTQWDGQSVWNILESAGVRMTENASCAACLGGPVDTFGRMNTPL 410
>gi|110598381|ref|ZP_01386654.1| homoaconitate hydratase family protein:3-isopropylmalate
dehydratase, prokaryotic [Chlorobium ferrooxidans DSM
13031]
gi|110339990|gb|EAT58492.1| homoaconitate hydratase family protein:3-isopropylmalate
dehydratase, prokaryotic [Chlorobium ferrooxidans DSM
13031]
Length = 431
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/391 (55%), Positives = 277/391 (70%), Gaps = 13/391 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+T+KI SRA+ + + G++VW+NVDIL+THDVCGP +F IFK+EFG +AKVWD +K+V
Sbjct: 4 TITQKILSRAANRKFVDAGESVWLNVDILLTHDVCGPPTFDIFKQEFGPDAKVWDPQKVV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDHYIFT++E A+RN+D+LR F EQ++ ++YD+ + YKGVCH+ALA+EG
Sbjct: 64 VLPDHYIFTANEHAHRNIDLLRQFAAEQHLPHYYDV-------GSDRYKGVCHVALAEEG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG VL GTDSHTCT+GAFG F TGIGNTDA F+LGTGK+ KVP +++F DG MP+
Sbjct: 117 FNIPGTVLFGTDSHTCTSGAFGMFGTGIGNTDAAFILGTGKLWEKVPESIKFTFDGVMPE 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
YL AKDLILQI+G+I+ GATYK+MEF G + L MEERMTL NM +EAGG NG++ AD
Sbjct: 177 YLTAKDLILQILGDITTDGATYKAMEFDGEAIFSLPMEERMTLTNMAIEAGGMNGIIAAD 236
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
Y+ ++ PYE SD A + S Y +++ +LEP+VA+PHSPDNRA R + K
Sbjct: 237 SVAESYVRARSQKPYEIFRSDPDAKYHSRYHYNVRELEPVVAQPHSPDNRATVRSVQGTK 296
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + YIGSCTGGK DF+ AAK+ GKKV V T +VPAT V L G T
Sbjct: 297 ITKSYIGSCTGGKLTDFVMAAKIL--KGKKVSVTTNIVPATVLV---ARALETERFEGVT 351
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
QIFE+AGC A PSC ACLGGP DT R
Sbjct: 352 LKQIFEDAGCSI-ALPSCAACLGGPSDTVGR 381
>gi|385206632|ref|ZP_10033500.1| homoaconitate hydratase family protein [Burkholderia sp. Ch1-1]
gi|385178970|gb|EIF28246.1| homoaconitate hydratase family protein [Burkholderia sp. Ch1-1]
Length = 434
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/397 (53%), Positives = 282/397 (71%), Gaps = 12/397 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL++K+ +RAS + +++PG+ VW VD+LM+HD C PG IFKKEFG NA+VWD E+ V
Sbjct: 6 TLSQKVLARASGRSRVTPGEVVWAKVDVLMSHDPCSPGVISIFKKEFGANARVWDPERFV 65
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+IPDH+I+T+D AN+NV ++R+F EQ IKYFYD+ P Y+GVCHI LA+ G
Sbjct: 66 MIPDHFIYTADVLANQNVRVMREFAREQEIKYFYDV-------GTPRYRGVCHIGLAEGG 118
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPGEVLLGTDSHT T+GAFG FA G+G TDA F LGTG++ LKVP T+R +GE+P
Sbjct: 119 HNRPGEVLLGTDSHTVTSGAFGTFAVGLGITDAAFALGTGEIPLKVPATIRVNFNGELPP 178
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++LAKDLIL ++GE+++ GATY+++EF G V+ LS+EERMTLCNMVVE G KNG++ +
Sbjct: 179 HVLAKDLILAVLGELTIDGATYQAIEFGGAVVDALSVEERMTLCNMVVECGAKNGIMVPN 238
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL + +P+E + D A ++ D+SK++PLVAKPHSPDN D +
Sbjct: 239 QATLDYLATRNEVPFEVLTPDVDADYVRVLDVDVSKMQPLVAKPHSPDNVDGIDRVADTR 298
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + YIGSCTGGK EDF+AAAK+ G+KV VPTF VPAT++V+ + T V G +
Sbjct: 299 ITQAYIGSCTGGKLEDFVAAAKIL--KGRKVSVPTFAVPATKEVFHGIVTTQVDGV---S 353
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMA 466
IF +AG + PSC AC GGP DT+ R+NEP++
Sbjct: 354 VYSIFTDAGVALSSEPSCAACCGGPADTFGRVNEPIS 390
>gi|223934960|ref|ZP_03626879.1| aconitate hydratase domain protein [bacterium Ellin514]
gi|223896413|gb|EEF62855.1| aconitate hydratase domain protein [bacterium Ellin514]
Length = 455
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/415 (54%), Positives = 286/415 (68%), Gaps = 24/415 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI +RA+ K ++ GDNVWV+ D+LMTHDVCGPG+ G+FK+EFG+ AKVWD++++
Sbjct: 1 MTLTEKILARAAGKAKVEAGDNVWVSADVLMTHDVCGPGTIGVFKREFGKTAKVWDKQRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDL--GNFKANP----------- 175
VIIPDHYIFT+D ++NRNVDILRDF EQ + YFYD+ D GN+ +P
Sbjct: 61 VIIPDHYIFTADSKSNRNVDILRDFVREQGLPYFYDVIDNPDGNWVFDPSKGLLKKQYGS 120
Query: 176 DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKV 235
+Y GVCH AL Q+GH RPGE+L GTDSHTC AGAF +FATGIGNTDAGFV+GTGK+LLKV
Sbjct: 121 NYAGVCHTALPQKGHTRPGEILFGTDSHTCMAGAFNEFATGIGNTDAGFVMGTGKLLLKV 180
Query: 236 PPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNM 295
P T+ F L+G + ++AKD+IL IGEI GATY++M+F G+ V LSM++RMT+ NM
Sbjct: 181 PETMHFRLEGALQPGVMAKDIILHCIGEIGFDGATYRAMQFDGSGVASLSMDDRMTIANM 240
Query: 296 VVEAGGKNGVVPADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
+EAGGKNG+ D T +++ + T Y+PV D F+ + D+SKLEP V
Sbjct: 241 AIEAGGKNGIFEFDAQTKAFVDYRCKLNGTKATYQPVERDANEKFVYDMVVDLSKLEPTV 300
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
A P R A+E DVK+DR YIGSCTGGKT DFL A+V GK+V + TF VPAT
Sbjct: 301 ACHPDPGQRKKAKEM-DVKLDRAYIGSCTGGKTSDFLEFARVL--KGKRVMIDTFGVPAT 357
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
++ V+ L G KT QI +AG + C ACLGGP DT+ RMN PM
Sbjct: 358 PEI---VHDLQTARWGEKTVWQILVDAGVQMTENAGCAACLGGPVDTFGRMNTPM 409
>gi|189500651|ref|YP_001960121.1| homoaconitate hydratase family protein [Chlorobium phaeobacteroides
BS1]
gi|189496092|gb|ACE04640.1| homoaconitate hydratase family protein [Chlorobium phaeobacteroides
BS1]
Length = 432
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/391 (54%), Positives = 280/391 (71%), Gaps = 13/391 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+T+KI +RA+ + + G+N+W+NVD+L+THDVCGP +F IF+++FG AKVWD EKIV
Sbjct: 4 TITQKILARAANRKFVEAGENIWLNVDVLLTHDVCGPPTFDIFREKFGPEAKVWDPEKIV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDHYIFT +E A+RN+D+LR+F EQ + +YD+ YKGVCH+ALAQEG
Sbjct: 64 VLPDHYIFTENEHAHRNIDLLREFANEQKLPNYYDV-------GTKRYKGVCHVALAQEG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG VL GTDSHTCT+GAFG F TGIGNTDA F+LGTGK+ KVP +++F+ +GEMP+
Sbjct: 117 YNLPGTVLFGTDSHTCTSGAFGMFGTGIGNTDAAFILGTGKIWEKVPESMKFIFEGEMPE 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
YL+AKDLILQI+G+IS GATY++MEF G+ V L MEERMTL NM +EAGG +G++ AD
Sbjct: 177 YLMAKDLILQILGDISTDGATYRAMEFDGSAVFSLPMEERMTLTNMAIEAGGMSGIIAAD 236
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+++++ PYE SD A + S +R+ +LEP+VA PHSPDNRA R + K
Sbjct: 237 SITEAYVKERSDKPYEIFTSDPDALYHSIHRYKTEELEPVVAMPHSPDNRATVRSVQGTK 296
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + YIGSCTGGK DF+ AAKV G V VPT +VPAT +V +L G+
Sbjct: 297 ITKSYIGSCTGGKLIDFVMAAKVL--KGNTVSVPTNIVPATVEV---AQSLTTEEFDGQP 351
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
I +EAGC T A PSC ACLGGP DT+ R
Sbjct: 352 IITILKEAGC-TIAPPSCAACLGGPSDTFGR 381
>gi|300723973|ref|YP_003713287.1| 3-isopropylmalate isomerase [Xenorhabdus nematophila ATCC 19061]
gi|297630504|emb|CBJ91169.1| 3-isopropylmalate isomerase, subunit with LeuD [Xenorhabdus
nematophila ATCC 19061]
Length = 432
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 284/406 (69%), Gaps = 12/406 (2%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+ T+T+KI +RAS + ++PG+ VW VDILM+HD C PG +FKKEFG++AK+WD E+
Sbjct: 2 SQTMTQKILARASGREHVTPGEVVWAKVDILMSHDPCTPGVASVFKKEFGQSAKIWDSER 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++IPDH+++++D +AN+N+ ++R+F EQNIKYFYD+ PDYKGVCHI LA+
Sbjct: 62 FILIPDHFVYSADSQANQNIRVMREFAAEQNIKYFYDV-------GTPDYKGVCHIGLAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPGEVLLGTDSHT TAGAFG FA G+G TDA + LGTG++ LKVP T+R G
Sbjct: 115 GGHTRPGEVLLGTDSHTVTAGAFGTFAIGLGITDAAYALGTGEIPLKVPTTIRVNFTGTK 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++LAKD+IL ++ E++V GATY+++EF G ++ LS+EERMT+CNMVVE G KNG++
Sbjct: 175 PAHVLAKDMILSVLSELTVDGATYQAIEFGGNVIDELSVEERMTICNMVVECGAKNGIMV 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+ T YL ++ LP+E VY DE A + D++ ++P +AKPHSPDN + +
Sbjct: 235 PNQATLDYLAERNHLPFEVVYPDEDAQYSRVLNIDVTDMQPKIAKPHSPDNVVSIEQVAN 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V I + YIGSCTGGK EDF+AAA+V G KVK+PT+ VPAT++V+ T + G
Sbjct: 295 VAISQAYIGSCTGGKLEDFVAAARVI--KGHKVKIPTYAVPATKEVFHKTITTQIEGV-- 350
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
+ QI +AG + C AC+GGP DT+ R+N+P++ + ++
Sbjct: 351 -SVYQILSDAGVKLSSESGCAACIGGPPDTFGRVNDPISVISTTNR 395
>gi|193215332|ref|YP_001996531.1| homoaconitate hydratase family protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088809|gb|ACF14084.1| homoaconitate hydratase family protein [Chloroherpeton thalassium
ATCC 35110]
Length = 431
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/394 (52%), Positives = 283/394 (71%), Gaps = 13/394 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+T+KI ++++ + + PG++VW+NVD+LMTHDVCGP + GI+++EFGE AKVWD++++V
Sbjct: 4 TITQKILAKSARRNTVDPGESVWLNVDVLMTHDVCGPPTIGIWEREFGEQAKVWDKDRLV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+PDHYIFT + ANRN+DILR F + ++ +YD+ +P YKGVCHIALA+EG
Sbjct: 64 ILPDHYIFTENTHANRNIDILRKFAKDYDLPNYYDV-------GSPRYKGVCHIALAEEG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG VL GTDSHTCT+GAFG F+TG+GNTDA F+LGTGK+ KVP +++FV DG+MP
Sbjct: 117 YNVPGTVLFGTDSHTCTSGAFGMFSTGVGNTDAAFILGTGKIWEKVPESMKFVFDGKMPK 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
YL AKDLILQI+G+I+ GATY++MEF G + L ++ERMTL NM +EAGG +G++ AD
Sbjct: 177 YLTAKDLILQILGDITTDGATYRAMEFAGEAIHSLPIDERMTLTNMAIEAGGMSGIIAAD 236
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ +TS PYE +SD A + S Y +++ +LEP+VAKPHSPDNR R K
Sbjct: 237 EITEAFVKARTSAPYEIFHSDPDAKYFSTYHYNVEELEPVVAKPHSPDNRDTVRNVAGTK 296
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+ + Y+GSCTGGK DF AAKV G+ VKVPTF+VP + V + + G T
Sbjct: 297 LTKCYLGSCTGGKLTDFEFAAKVL--HGQTVKVPTFVVPGSTLVAKQLTEKTID---GMT 351
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYARMNE 463
+IFE+AGC A SC ACLGGP DT R ++
Sbjct: 352 YMEIFEKAGC-IIAESSCAACLGGPADTVGRSSD 384
>gi|397689237|ref|YP_006526491.1| 3-isopropylmalate dehydratase large subunit [Melioribacter roseus
P3M]
gi|395810729|gb|AFN73478.1| 3-isopropylmalate dehydratase large subunit [Melioribacter roseus
P3M]
Length = 431
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/393 (52%), Positives = 277/393 (70%), Gaps = 13/393 (3%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI ++++ K ++ PG+++W+NVD+LMTHDVCGP + I+K+EFG+ AK+WD+EK
Sbjct: 2 GMTITEKIMAKSAGKKRVEPGESIWLNVDVLMTHDVCGPPTIEIWKREFGDKAKIWDKEK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VI PDHYIFT + +ANRNV+ILR+F E ++ +YD+ YKGVCHIALA+
Sbjct: 62 LVIFPDHYIFTKNPQANRNVNILREFASEYDVPNYYDV-------GTDRYKGVCHIALAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG+ PG VL GTDSHTCT+GAFG F+TG+GNTDA F+LGTGK+ KVP +L+F+ +G M
Sbjct: 115 EGYNLPGTVLFGTDSHTCTSGAFGMFSTGVGNTDAAFILGTGKIWEKVPESLKFIFEGNM 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+YL AKDLIL I+G+I+ G TY+++EF G + + M+ERMTL NM +EAG NG++
Sbjct: 175 PEYLTAKDLILMILGDITTDGGTYRALEFDGEAIFSMQMDERMTLTNMAIEAGAMNGIIK 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T KY+ ++T PYE SD A + YR++++++EPLVAKPHSPDNR R
Sbjct: 235 ADEVTEKYVRERTDKPYEIFESDPDAKYREVYRYNVNEIEPLVAKPHSPDNRDTVRNVAG 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
K+ + YIGSCTGGK DF AAK+ G +VK PTF+VP + V L V G
Sbjct: 295 RKLTKCYIGSCTGGKLTDFYNAAKIIF--GNEVKTPTFIVPGSTYV---AQQLEVETING 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
T +IFE+AGC A SC ACLGGP DT R
Sbjct: 350 ITLKEIFEKAGC-VIAQSSCAACLGGPADTVGR 381
>gi|290474490|ref|YP_003467370.1| 3-isopropylmalate isomerase [Xenorhabdus bovienii SS-2004]
gi|289173803|emb|CBJ80585.1| 3-isopropylmalate isomerase, subunit with LeuD [Xenorhabdus
bovienii SS-2004]
Length = 432
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 283/406 (69%), Gaps = 12/406 (2%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+ T+T+KI +RAS + Q++PG+ VW VDILM+HD C PG +FKKEFG++A++WD +
Sbjct: 2 SQTMTQKILARASGREQVTPGEVVWAKVDILMSHDPCTPGVASVFKKEFGQDARIWDPTR 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++IPDH+++++D +AN+N+ ++R+F EQNIKYFYD+ P+YKGVCHI LA+
Sbjct: 62 FILIPDHFVYSADPQANQNIRVMREFAAEQNIKYFYDV-------GTPNYKGVCHIGLAE 114
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPGEVLLGTDSHT TAGAFG FA G+G TDA + LGTG++ LKVP +++ G
Sbjct: 115 GGHTRPGEVLLGTDSHTVTAGAFGAFAIGLGITDAAYALGTGEIPLKVPTSIKVNFTGTK 174
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++LAKD+IL ++ E++V GATY+++EF G ++ LS+EERMT+CNMVVE G KNG++
Sbjct: 175 PPHVLAKDMILAVLSELTVDGATYEAIEFGGNVIDELSVEERMTICNMVVECGAKNGIMV 234
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+ T YL ++ LP+E VY DE A + D+S ++P++AKPHSPDN + +
Sbjct: 235 PNQATLDYLAERNHLPFEIVYPDEDAEYSRVLNIDVSDMQPMIAKPHSPDNVVPIEKIAN 294
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V I + YIGSCTGGK EDF+AAA+V G KV +PT+ VPAT++V+ T + G
Sbjct: 295 VAISQAYIGSCTGGKLEDFIAAARVI--KGNKVSIPTYAVPATKEVFHKTITTQI---DG 349
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
+ QI +AG + C AC GGP DT+ R+N+P++ + ++
Sbjct: 350 VSVYQILTDAGVTLSSESGCAACCGGPPDTFGRVNDPISVISTTNR 395
>gi|149199677|ref|ZP_01876709.1| 3-isopropylmalate dehydratase [Lentisphaera araneosa HTCC2155]
gi|149137194|gb|EDM25615.1| 3-isopropylmalate dehydratase [Lentisphaera araneosa HTCC2155]
Length = 433
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/394 (53%), Positives = 275/394 (69%), Gaps = 13/394 (3%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI + A+ + + G+NVWV+V++LMTHDVCGPG+ GIFK +FG +AKV+D+E +
Sbjct: 3 MTLTEKIIANAAGRDSVKAGENVWVDVNVLMTHDVCGPGTIGIFKDKFGADAKVFDKENV 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VIIPDHYIFT D+RA RN+DIL DF EQ+I +Y +Y GVCH+ L ++
Sbjct: 63 VIIPDHYIFTEDKRALRNIDILTDFAKEQDIPNYYQ-------PGTDNYMGVCHVTLPEK 115
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH RPGE++LGTDSHTCT GA G FATGIGNTDA F +GTG+ LK+P T++FVL+G++P
Sbjct: 116 GHVRPGEIILGTDSHTCTHGALGAFATGIGNTDAAFTMGTGRTWLKIPETIKFVLNGKLP 175
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++AKDLIL +IGEI +GATY +MEF G ++ LS+EERMT+CNM +EAGGKNGV+ A
Sbjct: 176 KTMMAKDLILHMIGEIGFSGATYCAMEFEGPVIDELSIEERMTICNMAIEAGGKNGVIAA 235
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D Y++++T +PY +D A + Y + S+LEP VA P +PD R E
Sbjct: 236 DAKVEAYVKERTDVPYTLFKADADADYKDVYEINCSELEPTVAIPSAPDKRKGVSEIAGT 295
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ R YIGSCTGGKTEDF AAA++ G+KV + TF+VP+T V D+ TL K
Sbjct: 296 DLTRAYIGSCTGGKTEDFAAAAEIMY--GQKVAMDTFVVPSTTFVEKDLNTLKFK---DK 350
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMN 462
T +IF EAGC P C ACLGGP+DT+ R +
Sbjct: 351 TYMEIFLEAGCRI-GPPGCAACLGGPEDTFGRTH 383
>gi|188535170|ref|YP_001908967.1| 3-isopropylmalate dehydratase large subunit [Erwinia tasmaniensis
Et1/99]
gi|188030212|emb|CAO98098.1| 3-isopropylmalate dehydratase large subunit [Erwinia tasmaniensis
Et1/99]
Length = 436
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/399 (49%), Positives = 277/399 (69%), Gaps = 12/399 (3%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+++KI +RAS + ++PG+ VW VDILM+HD C PG +FKKEFG AKVWD E+ +
Sbjct: 4 TISQKILARASGRKCVTPGEIVWAKVDILMSHDPCTPGVASVFKKEFGARAKVWDAERFI 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+IPDH+++++D +AN+N+ ++R+F EQ IKYFYD+ PDYKGVCHI LA+ G
Sbjct: 64 MIPDHFVYSADPQANQNIRVMREFAREQQIKYFYDV-------GTPDYKGVCHIGLAEGG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPGEVLLGTDSHT TAGAFG FA G+G TDA + LG+G++ LKVP T+R G MP
Sbjct: 117 HTRPGEVLLGTDSHTVTAGAFGCFAIGLGITDAAYALGSGEIPLKVPTTIRVNYHGVMPA 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
YL AKDLIL ++ ++V GATY+++EF G+ ++ +S+EERMT+CNMVVE G KNG++ +
Sbjct: 177 YLQAKDLILGLLARLTVDGATYEAIEFGGSVIDAMSVEERMTICNMVVECGAKNGIMVPN 236
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL +T +P+ V D A + ++++++PLVAKPHSPDN K+V
Sbjct: 237 QATLDYLATRTDIPFSVVEPDADARYSQVLDINVTEMQPLVAKPHSPDNVVAIDTLKNVA 296
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + YIGSCTGGK DF+AAA+V G+KV VPTF VPAT++V+ + + + G++
Sbjct: 297 ISQAYIGSCTGGKLADFIAAARVI--KGRKVVVPTFAVPATKEVFHGLISTDID---GQS 351
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASL 468
+I +AG + C AC GGP DT+ R+N+P++ +
Sbjct: 352 VYRILCDAGVQLSSESGCAACCGGPADTFGRVNQPISVI 390
>gi|296104307|ref|YP_003614453.1| 3-isopropylmalate dehydratase large subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295058766|gb|ADF63504.1| 3-isopropylmalate dehydratase large subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 451
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/410 (46%), Positives = 282/410 (68%), Gaps = 12/410 (2%)
Query: 64 SVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVW 123
++K MTLTEKI +RAS++ +SPG+ ++VNVD+LM+HD C PG +FKKEFGE AKVW
Sbjct: 13 NIKPGMTLTEKIIARASKRSHVSPGEVLFVNVDVLMSHDPCTPGVASVFKKEFGEEAKVW 72
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
+ ++ ++IPDH+++++D +AN+N+ ++R+F QNI +FYD+ PDYKGVCHI
Sbjct: 73 NPDRFIMIPDHFVYSADPQANQNIRVMREFAKAQNITHFYDV-------GTPDYKGVCHI 125
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
LA+ GH RPGEVLLGTDSHT TAGAFG FA G+G TD + LGTG++ L VP T++
Sbjct: 126 GLAEGGHTRPGEVLLGTDSHTVTAGAFGTFAIGVGITDGAYALGTGEIPLMVPATIKVNY 185
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
G+ + AKDLIL ++ E+ V GATY ++EF G ++ LS+EERMT+CNMVVE G KN
Sbjct: 186 YGKKAKSVQAKDLILVLMKELGVEGATYNAIEFTGNVIDELSVEERMTMCNMVVECGAKN 245
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G++ + T YL +T++PY + DE A ++ D+S L ++A+PHSPDN
Sbjct: 246 GIMVPNQATLDYLATRTTVPYSVLAPDENAHYVRTIDIDVSALTSVIARPHSPDNVVAVA 305
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ +++ I + YIGSCTGGKT+DF+AAA++ +KV +PT+ VPAT++V+ ++ T V
Sbjct: 306 QLENIAISQAYIGSCTGGKTDDFIAAAEILWQ--RKVAIPTYAVPATKEVFHNLITTQVK 363
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
G++ +I AG + P C AC GGP DT+ R+ +P++ + ++
Sbjct: 364 ---GRSVYEILTRAGVKLSSEPGCAACCGGPADTFGRVRDPISVISTTNR 410
>gi|354724806|ref|ZP_09039021.1| 3-isopropylmalate dehydratase large subunit [Enterobacter mori LMG
25706]
Length = 451
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/410 (46%), Positives = 278/410 (67%), Gaps = 12/410 (2%)
Query: 64 SVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVW 123
++ MTLTEKI ++AS + +SPG+ ++VNVD+LM+HD C PG +FKKEFGE AKVW
Sbjct: 13 NINQGMTLTEKIIAKASNRTHVSPGEVLFVNVDVLMSHDPCTPGVASVFKKEFGEEAKVW 72
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
D ++ ++IPDH+++++D +AN+N+ ++R+F QNI +FYD+ PDYKGVCHI
Sbjct: 73 DPDRFIMIPDHFVYSADSQANQNIRVMREFANAQNITHFYDV-------GTPDYKGVCHI 125
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
LA+ GH RPGEVLLGTDSHT TAGAFG FA G+G TD + LGTG++ L VP T++
Sbjct: 126 GLAEGGHTRPGEVLLGTDSHTVTAGAFGTFAIGVGITDGAYALGTGEIPLMVPATIKVNY 185
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
G+ + AKDLIL ++ E+ V GATY ++EF G ++ LS+EERMT+CNMVVE G KN
Sbjct: 186 YGKKAKSVQAKDLILVLMKELGVEGATYNAIEFTGNVIDELSVEERMTMCNMVVECGAKN 245
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G++ + T YL +T +PY + DE A ++ D+S L ++A+PHSPDN
Sbjct: 246 GIMVPNQATLDYLATRTRIPYTVMTPDEDAQYVRTIDIDVSGLTSVIARPHSPDNVVAVA 305
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ +++ I + YIGSCTGGKT DF+AAA++ +KV +PT+ VPAT++V+ ++ T V
Sbjct: 306 QLENIAIAQAYIGSCTGGKTGDFIAAAEILWQ--RKVTIPTYAVPATKEVFHNLITTQVK 363
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
G++ +I AG + P C AC GGP DT+ R+ +P++ + ++
Sbjct: 364 ---GRSVYEILTRAGVKLSSEPGCAACCGGPADTFGRVRDPISVISTTNR 410
>gi|51209876|ref|YP_063540.1| 3-isopropylmalate dehydratase large subunit [Gracilaria
tenuistipitata var. liui]
gi|50657630|gb|AAT79615.1| 3-isopropylmalate dehydratase large subunit [Gracilaria
tenuistipitata var. liui]
Length = 439
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/410 (47%), Positives = 281/410 (68%), Gaps = 13/410 (3%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
VK MT++EKI ++AS+K + G+ +W V++LMTHD C PG IFKKEFG+ AK+WD
Sbjct: 3 VKKTMTMSEKILAKASQKNNVQAGEVIWSKVNVLMTHDPCSPGVISIFKKEFGDQAKIWD 62
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+ ++IPDH+IFTSDE+AN N+ ++RDF EQ KYFYD + DYKGVCHIA
Sbjct: 63 PKGHIMIPDHFIFTSDEKANANIRMMRDFAQEQGHKYFYD-------PHSKDYKGVCHIA 115
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
LAQEGH RPGEVL+GTDSHT T+GAFG FA G+GNTDA F+LGTG++LL+VP T++ +
Sbjct: 116 LAQEGHNRPGEVLVGTDSHTVTSGAFGTFAIGVGNTDAAFILGTGEILLRVPDTIKVIFH 175
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++ ++AKDLIL ++ +++ GATY+S+EF G T++ +S+E+RMTLCNMV+EAG KNG
Sbjct: 176 GQLGSNIMAKDLILLLLKDLTTQGATYQSIEFTGETIDNMSIEDRMTLCNMVIEAGAKNG 235
Query: 305 VVPADGTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
++ + +T +Y+ ++ + ++ + D+ A + +D++ ++P +AKPHSPDN
Sbjct: 236 IIIPNNSTIEYINARSDIKDFDIIVPDQSAHYTKVLEYDVTNIQPQIAKPHSPDNVDSID 295
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ KIDR YIGSCTGGK+ DF AAAK+ KV + TF VPAT++V+ D+ +
Sbjct: 296 NVEGEKIDRAYIGSCTGGKSSDFYAAAKIL--KNHKVSIDTFGVPATREVFYDIINQKID 353
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMASLCLHDK 473
+ +I AG PSC AC GGP DT+ R+N M+ + ++
Sbjct: 354 DI---SVYEILVNAGVHMTTEPSCAACCGGPIDTFGRVNNTMSVISTTNR 400
>gi|413926691|gb|AFW66623.1| hypothetical protein ZEAMMB73_662921 [Zea mays]
Length = 238
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/191 (89%), Positives = 183/191 (95%)
Query: 274 MEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKA 333
MEFVG+TVE L+MEERMTLCNMV+EAGGKNGVVPAD TTFKYLE KTS+ YEPVYSD +A
Sbjct: 1 MEFVGSTVESLTMEERMTLCNMVIEAGGKNGVVPADETTFKYLEGKTSVDYEPVYSDAQA 60
Query: 334 SFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF 393
F S+YRFD+SKLEP+VAKPHSPDNRA ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF
Sbjct: 61 RFFSDYRFDVSKLEPVVAKPHSPDNRAPARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF 120
Query: 394 LASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
LASGKKVKVPTFLVPATQKVW+DVY+LPVPGSGGKTCSQ+FEEAGCDTPASP+CGACLGG
Sbjct: 121 LASGKKVKVPTFLVPATQKVWLDVYSLPVPGSGGKTCSQVFEEAGCDTPASPNCGACLGG 180
Query: 454 PKDTYARMNEP 464
P+DTYARMNEP
Sbjct: 181 PRDTYARMNEP 191
>gi|224285372|gb|ACN40409.1| unknown [Picea sitchensis]
Length = 237
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 154/191 (80%), Positives = 174/191 (91%)
Query: 274 MEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKA 333
MEF G+TV+ L+ME+RMTLCNMVVEAGGKNGVV AD TTF YLE KTS +E +YSDE A
Sbjct: 1 MEFSGSTVKSLTMEDRMTLCNMVVEAGGKNGVVAADQTTFDYLEGKTSSSFEALYSDEAA 60
Query: 334 SFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF 393
+L EYRFD+SKLEPLVAKPHSPDNRALAREC+ +KIDRVYIGSCTGGKTEDF+AAAK+
Sbjct: 61 RYLQEYRFDVSKLEPLVAKPHSPDNRALARECRHIKIDRVYIGSCTGGKTEDFMAAAKIL 120
Query: 394 LASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+++G+KVKVPTFLVPATQKVWMD+YTLPVPG GKTC+QIFEEAGCDTPASP+CGACLGG
Sbjct: 121 ISAGQKVKVPTFLVPATQKVWMDLYTLPVPGGNGKTCAQIFEEAGCDTPASPNCGACLGG 180
Query: 454 PKDTYARMNEP 464
P+DTYARMN P
Sbjct: 181 PRDTYARMNVP 191
>gi|408405053|ref|YP_006863036.1| 3-isopropylmalate dehydratase large subunit [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365649|gb|AFU59379.1| 3-isopropylmalate dehydratase large subunit [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 426
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 229/387 (59%), Gaps = 22/387 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK---VWDR 125
MT+TEKI +RA+ K +LSPGD V+ VD +M HDV GPG +F + + K +WD
Sbjct: 1 MTITEKILARAAGKQRLSPGDVVFAKVDKVMMHDVSGPGVIKVFSEWEKKGIKLDHIWDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ +D + N+ L +F + I +FK G+CH
Sbjct: 61 NKVWVTEDHFVPAADRVSAENIITLSNFTKKYGINK--------HFKYGLGQYGICHTLS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PGEV +G DSHT T GA G FA G+G+TD +VL G++ +VP T+ F ++G
Sbjct: 113 HEEAMVLPGEVYVGGDSHTNTTGAMGAFAAGLGHTDIAYVLMNGQIWFRVPETMLFKIEG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
P +++AKD+IL+IIG+I GA YK+M+F G+ V++L+MEER+TL NM EAG KNG+
Sbjct: 173 TKPAHIMAKDIILRIIGDIGTDGANYKAMQFAGSVVKKLAMEERLTLTNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
V D TT+ YL ++T Y PV D A + + +DI KLEP VAKP SP N + ARE
Sbjct: 233 VEPDETTYAYLRERTDAKYSPVNGDPDAHYSEVFTYDIEKLEPTVAKPFSPGNISAAREL 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ ++D+ YIGSCTG K ED AAK+ GKKVK+ T ++PA Q ++
Sbjct: 293 QGTELDKAYIGSCTGAKLEDLREAAKIL--KGKKVKIRTEVLPAAQSIYAKAMK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF EAG P+CGAC G
Sbjct: 345 --EGLINIFMEAGA-VVGPPTCGACCG 368
>gi|298714292|emb|CBJ27408.1| putative homoaconitate hydratase, N-terminal part [Ectocarpus
siliculosus]
Length = 278
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 169/207 (81%), Gaps = 4/207 (1%)
Query: 52 PQQSERRPATTGS----VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPG 107
P ++ R+ A T + V MTLTEKI ++A ++ ++P DNVWV D+LMTHDVCGPG
Sbjct: 63 PNEATRKGAATMATSVQVSEPMTLTEKIIAKACDRQSVAPNDNVWVKTDVLMTHDVCGPG 122
Query: 108 SFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD 167
+ G F KEFG AKVWD E +VIIPDHYIFT+D RANRNVDILRDF +Q+IKYFYDI D
Sbjct: 123 TIGNFYKEFGPKAKVWDPEGVVIIPDHYIFTADPRANRNVDILRDFVNQQDIKYFYDITD 182
Query: 168 LGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLG 227
GNFKANPDYKGVCH+ALAQEGH RPGEVL GTDSHTC AGAFGQFATGIGNTDA FV+G
Sbjct: 183 RGNFKANPDYKGVCHVALAQEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDASFVMG 242
Query: 228 TGKVLLKVPPTLRFVLDGEMPDYLLAK 254
TGK+L+K P +++F L+GE+PD+LLAK
Sbjct: 243 TGKLLIKSPASMQFALEGEIPDHLLAK 269
>gi|289193237|ref|YP_003459178.1| homoaconitate hydratase family protein [Methanocaldococcus sp.
FS406-22]
gi|288939687|gb|ADC70442.1| homoaconitate hydratase family protein [Methanocaldococcus sp.
FS406-22]
Length = 424
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 231/391 (59%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI ++AS K ++SPGD V N+D+ M HD+ GP + K E+G KVWD EK
Sbjct: 2 GMTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLK-EYGIE-KVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI+ DH + +A N ++R F EQ IKYFYDI++ GVCH L +
Sbjct: 60 IVILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++G DSHTCT GAFG FATGIG+TD V TGK+ KVP T+ F + G++
Sbjct: 109 KGHIAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ +KD+IL IIGE+ V GATYK+ +F G TV+++S+ RMT+ NM +E GGK G++
Sbjct: 169 QPYVTSKDVILTIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN A
Sbjct: 229 PDEKTIQYVKEAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKQA 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A ++ G V + PA+++ ++
Sbjct: 289 REVAGKPIDQVFIGSCTNGRVEDLRMAIEIIEKHGGIADNVRVVVTPASREEYLKALK-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGIIEKFLKYGC-VVTNPSCSACMG 370
>gi|15668676|ref|NP_247475.1| 3-isopropylmalate dehydratase large subunit [Methanocaldococcus
jannaschii DSM 2661]
gi|3219823|sp|P81291.1|LEUC_METJA RecName: Full=Isopropylmalate/citramalate isomerase large subunit;
AltName: Full=(R)-2-methylmalate dehydratase; AltName:
Full=(R)-citramalate dehydratase; AltName:
Full=3-isopropylmalate dehydratase; AltName:
Full=Alpha-isopropylmalate dehydratase; AltName:
Full=Citraconate hydratase; AltName:
Full=Isopropylmalate isomerase; Short=IPMI; AltName:
Full=Maleate hydratase; Short=Malease
gi|1591201|gb|AAB98487.1| 3-isopropylmalate dehydratase (leuC) [Methanocaldococcus jannaschii
DSM 2661]
Length = 424
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 231/391 (59%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI ++AS K ++SPGD V N+D+ M HD+ GP + K E+G KVW+ EK
Sbjct: 2 GMTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLK-EYGIE-KVWNPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI+ DH + +A N ++R F EQ IKYFYDI++ GVCH L +
Sbjct: 60 IVILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++G DSHTCT GAFG FATGIG+TD V TGK+ KVP T+ F + G++
Sbjct: 109 KGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ +KD+IL IIGE+ V GATYK+ +F G TV+++S+ RMT+ NM +E GGK G++
Sbjct: 169 QPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN A
Sbjct: 229 PDEKTIQYVKEAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKQA 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A K+ G V + PA+++ ++
Sbjct: 289 REVAGKPIDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALK-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGIIEKFLKYGC-VVTNPSCSACMG 370
>gi|340624471|ref|YP_004742924.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis X1]
gi|339904739|gb|AEK20181.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis X1]
Length = 424
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 229/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTL EKI ++AS ++SPGD V V+ M HD+ GP S KKE +KVWD EK
Sbjct: 2 AMTLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKE--GISKVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH I A N ++R+F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG V++G DSHTCT GAFG FATGIG+TD TG++ KVP TL F + GE+
Sbjct: 109 KGHIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++KD+IL IIG + AGATYK+ +F G TV+ +++ RMT+ NM +E GGK G++
Sbjct: 169 KPEVMSKDVILSIIGMVGAAGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIA 228
Query: 308 ADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y++ + T+ P+E V D+ A F ++ D+S LEP++A PH+ DN
Sbjct: 229 PDDKTINYVKNAMEANNTAKPFELVLGDKDAEFEEKFEIDVSNLEPVMACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED AA +V G K + + PA++ + ++
Sbjct: 289 REVAGTPIDQVFIGSCTNGRLEDLRAALEVIEKHGGISKDIRVVVTPASRSIMLEAID-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGLIKKFYQYGC-VVTNPSCSACMG 370
>gi|261403048|ref|YP_003247272.1| 3-isopropylmalate dehydratase large subunit [Methanocaldococcus
vulcanius M7]
gi|261370041|gb|ACX72790.1| homoaconitate hydratase family protein [Methanocaldococcus
vulcanius M7]
Length = 422
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 229/390 (58%), Gaps = 28/390 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI ++AS K ++SPGD V +D+ M HD+ GP + K E+G KVWD EKI
Sbjct: 1 MTIAEKILAKASGKKEVSPGDIVMAKIDVAMVHDITGPLTVNTLK-EYGIE-KVWDPEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH + +A N ++R F EQ IKYFYDI++ GVCH L ++
Sbjct: 59 VILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH PGE+++G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + GE+
Sbjct: 108 GHVAPGEIVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGELWFKVPETLYFNISGELK 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ +KD+IL IIGE+ V GATYK+ +F G TV+ +S+ RMT+ NM +E GGK G++
Sbjct: 168 PYVTSKDVILSIIGEVGVDGATYKACQFGGETVKNMSIASRMTMTNMAIEMGGKTGIIEP 227
Query: 309 DGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN AR
Sbjct: 228 DEKTIQYVKEAMKKHGTERPFEIIKGDEDAEFEEVYEIEADKIEPVFACPHNVDNVKQAR 287
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLPV 422
E ID+V+IGSCT G+ ED A +V G + + PA+++ ++
Sbjct: 288 EVAGRPIDQVFIGSCTNGRVEDLRMAIEVIEKHGGIADNIRVIITPASREEYLKALK--- 344
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 345 -----EGIIEKFLKYGC-VVTNPSCSACMG 368
>gi|338730294|ref|YP_004659686.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga thermarum
DSM 5069]
gi|335364645|gb|AEH50590.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga thermarum
DSM 5069]
Length = 425
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 230/386 (59%), Gaps = 23/386 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI + S+K ++ PGD ++V VD+++ +D+ P + FKK E KV+D EKI
Sbjct: 4 TITEKILLKHSDKKEIFPGDLIFVKVDLVLANDITAPLAIKEFKKIGVE--KVFDPEKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDH D ++ I R F EQNI+Y+Y++ G+ H+ L EG
Sbjct: 62 LVPDHSTPNKDIKSAEQAKITRLFAKEQNIRYYYEV----------GRAGIAHVLLPDEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+ ++G DSHTCT GA G F+TGIG+TDA + + G+V LKVP T++F+ G++P
Sbjct: 112 LIAPGDCVVGADSHTCTYGALGAFSTGIGSTDAAYAMAFGEVWLKVPETVKFIYYGKLPK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL IG+I V GA Y +MEF G ++ L M +R T+CNM VEAG KNG++ D
Sbjct: 172 WVGGKDLILYTIGKIGVDGARYMAMEFAGEAIKNLGMADRFTMCNMAVEAGAKNGIIEPD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KD 367
T +YL+ + YE ++SD+ A++ Y +D+SKLEP+VA PH P N E K+
Sbjct: 232 EITLEYLKKRVKRKYELIFSDKDANYKEVYEWDVSKLEPMVAFPHLPSNVYPVSEAASKN 291
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ +D+VYIGSCT G+ ED AAK+ + + PAT ++++
Sbjct: 292 ITLDQVYIGSCTNGRLEDLRIAAKILKGHKVNPNLRLIITPATPEIYLQALK-------- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG T PSCG CLGG
Sbjct: 344 EGLIEIFLEAGA-TITPPSCGPCLGG 368
>gi|256810662|ref|YP_003128031.1| 3-isopropylmalate dehydratase large subunit [Methanocaldococcus
fervens AG86]
gi|256793862|gb|ACV24531.1| homoaconitate hydratase family protein [Methanocaldococcus fervens
AG86]
Length = 424
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 231/391 (59%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI ++AS K ++SPGD V N+D+ M HD+ GP + K E+G KVWD EK
Sbjct: 2 GMTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLK-EYGIE-KVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + +A N ++R F EQ IKYFYDI++ GVCH L +
Sbjct: 60 IVVLFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++G DSHTCT GAFG FATGIG+TD V TGK+ KVP T+ F + G++
Sbjct: 109 KGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ +KD+IL IIGE+ V GATYK+ +F G TV+++S+ RMT+ NM +E GGK G++
Sbjct: 169 QPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN A
Sbjct: 229 PDEKTVQYVKEAMKKHGTERPFEIIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKPA 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A ++ G V + PA+++ ++
Sbjct: 289 REVAGRPIDQVFIGSCTNGRFEDLKMAIEIIDKHGGIADNVRVVVTPASREEYLKALKAG 348
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 349 I--------IEKFLKYGC-VVTNPSCSACMG 370
>gi|333988513|ref|YP_004521120.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
SWAN-1]
gi|333826657|gb|AEG19319.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
SWAN-1]
Length = 418
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 234/390 (60%), Gaps = 30/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT+ EKI ++AS K + G+ V N+D+ MTHD+ GP S F+K G + KVWD EK
Sbjct: 2 SMTMAEKILAKASGKKEAEAGEIVMANIDVAMTHDLTGPLSVESFEK-IGVD-KVWDPEK 59
Query: 128 IVIIPDHYI-FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
IV++ DH + S E AN ++ +R F EQ I FYD+++ GVCH L
Sbjct: 60 IVVVFDHQVPADSIEAANNHIQ-MRKFVKEQKINNFYDVRE-----------GVCHQVLP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++GH PGEV++GTDSHTCT GA G F+TGIG+TD V TGK+ KVP T++F + G+
Sbjct: 108 EKGHIVPGEVVVGTDSHTCTHGALGAFSTGIGSTDMAMVFATGKLWFKVPETIKFDITGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ DY+ AKD++L IIG+I GATYK+ EF G T + +S+ +RM LCNM +E GGK G+V
Sbjct: 168 LSDYVYAKDVVLNIIGKIGADGATYKACEFGGETTQEMSVSDRMVLCNMAIEMGGKTGLV 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TF YL+ ++S YE + +D A+ L D++ LEP VA PH DN E +
Sbjct: 228 EPDQKTFDYLKGRSSKSYEVMKTDSDAASLKTMEIDVNDLEPQVACPHHVDNVKPVSEVE 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW---MDVYTLPVP 423
+ID+V++GSCT G+ +D AAK+ + ++PA+++++ MD L
Sbjct: 288 GTQIDQVFLGSCTNGRLDDLRTAAKILKGHSISNNIRMLVIPASREIYTQAMDEGLL--- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F ++G +P CG CLGG
Sbjct: 345 --------RTFVDSGA-LVCNPCCGPCLGG 365
>gi|304315506|ref|YP_003850653.1| 3-isopropylmalate dehydratase, large subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302588965|gb|ADL59340.1| predicted 3-isopropylmalate dehydratase, large subunit
[Methanothermobacter marburgensis str. Marburg]
Length = 418
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 230/386 (59%), Gaps = 23/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT++EKI +RAS K ++ G+ V ++D+ MTHD+ GP S F++ G + +VWD EK
Sbjct: 2 SMTVSEKILARASGKDRVEAGEIVMASIDVAMTHDLTGPLSVESFER-IGRD-RVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+I DH + A +N I+RDF EQ IK FYD+++ GVCH L +
Sbjct: 60 IVVIFDHQVPADSLDAAQNHMIMRDFVREQGIKNFYDVRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++GTDSHTCT GA G FATGIG+TD V TGK+ +VP T+RF + G +
Sbjct: 109 KGHVVPGEVIVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFRVPETIRFEISGSL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ AKD+IL IIGE+ GATY + EF G TV +S+ +RM L NM +E GGK G+V
Sbjct: 169 RKHVYAKDVILSIIGEVGADGATYMACEFAGETVADMSVSDRMVLSNMAIEMGGKTGIVE 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+E ++ PY +D A L+ D+S LEP VA PH+ DN E D
Sbjct: 229 PDEKTIRYVERRSDKPYRVFRADPDAPSLNVMEVDVSDLEPQVACPHNVDNVKPVSEV-D 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+V++GSCT G+ D AA + V ++PA+++V+ +
Sbjct: 288 VEIDQVFLGSCTNGRLSDLRDAAAILKNRDVADSVRMLVIPASREVYRRALS-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG +P CG CLGG
Sbjct: 340 EGLMEIFVDAGA-LVCNPCCGPCLGG 364
>gi|134045480|ref|YP_001096966.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis C5]
gi|132663105|gb|ABO34751.1| 3-isopropylmalate dehydratase, large subunit [Methanococcus
maripaludis C5]
Length = 424
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 228/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTL EKI ++AS Q+SPGD V V+ M HD+ GP S KKE +KVWD EK
Sbjct: 2 AMTLAEKILAKASGNTQVSPGDIVMAKVETAMVHDITGPLSVNTLKKE--GISKVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH I A N ++R+F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG V++G DSHTCT GAFG FATGIG+TD TG++ KVP TL F + GE+
Sbjct: 109 KGHIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++KD+IL IIG + GATYK+ +F G TV+ +++ RMT+ NM +E GGK G++
Sbjct: 169 KPEVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIA 228
Query: 308 ADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y++ + T+ P+E + D+ A F ++ D+S LEP++A PH+ DN
Sbjct: 229 PDDKTINYVKNAMEMNNTAKPFEFILGDKDAEFEKKFEIDVSNLEPVMACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED AA +V G K + + PA++ + ++
Sbjct: 289 REVAGTPIDQVFIGSCTNGRLEDLRAALEVIEKHGGISKDIRVVVTPASRSIMLEAID-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGLIKKFYQYGC-VVTNPSCSACMG 370
>gi|45358712|ref|NP_988269.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis S2]
gi|45047578|emb|CAF30705.1| 3-isopropylmalate dehydratase [Methanococcus maripaludis S2]
Length = 424
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 227/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTL EKI ++AS ++SPGD V V+ M HD+ GP S KKE +KVWD EK
Sbjct: 2 AMTLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKE--GISKVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH I A N ++R+F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG V++G DSHTCT GAFG FATGIG+TD TG++ KVP TL F + GE+
Sbjct: 109 KGHIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++KD+IL IIG + GATYK+ +F G TV+ +++ RMT+ NM +E GGK G++
Sbjct: 169 KPEVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIA 228
Query: 308 ADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y++ + T+ P+E V D+ A F ++ D+S LEP++A PH+ DN
Sbjct: 229 PDDKTINYVKNAMEANNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED AA V G K + + PA++ + ++
Sbjct: 289 REVAGTPIDQVFIGSCTNGRLEDLRAALNVIEKHGGISKDIRVVVTPASRSIMLEAID-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGLIKKFYQYGC-VVTNPSCSACMG 370
>gi|150402325|ref|YP_001329619.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis C7]
gi|150033355|gb|ABR65468.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C7]
Length = 424
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 228/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTL EKI ++AS Q+SPGD V V+ M HD+ GP S KKE +KVWD EK
Sbjct: 2 AMTLAEKILAKASGNTQVSPGDIVMAKVETAMVHDITGPLSVNTLKKE--GISKVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH I A N ++R+F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG V++G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + GE+
Sbjct: 109 KGHVVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAVFATGELWFKVPETLYFNISGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++KD+IL IIG + GATYK+ +F G TV+ +++ RM++ NM +E GGK G++
Sbjct: 169 KPEVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMSMSNMAIEMGGKAGLIA 228
Query: 308 ADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y++ + T+ P+E + D+ A F ++ ++ LEP++A PH+ DN
Sbjct: 229 PDDKTINYVKNAMETNNTAKPFEFILGDKNAEFEEKFEIEVDNLEPVMACPHNVDNVKTV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED AA KV G K + + PA++ V ++
Sbjct: 289 REVAGTPIDQVFIGSCTNGRIEDLRAALKVIEKHGGISKDIRVVVTPASRSVMLEAID-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGLIKKFYQYGC-VVTNPSCSACMG 370
>gi|312136807|ref|YP_004004144.1| 3-isopropylmalate dehydratase large subunit [Methanothermus
fervidus DSM 2088]
gi|311224526|gb|ADP77382.1| 3-isopropylmalate dehydratase, large subunit [Methanothermus
fervidus DSM 2088]
Length = 419
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 228/386 (59%), Gaps = 23/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT+ EKI ++AS K ++ G+ V N+D+ M HD+ GP + FK E EN VWD EK
Sbjct: 2 SMTMAEKILAKASGKDKVEAGEIVMANIDVAMVHDITGPLTVERFK-EIAEN--VWDPEK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + + N I+R+F EQ IK+FYD+ + G+CH L +
Sbjct: 59 IVVVFDHQVPAESIESAENHIIMREFVKEQGIKHFYDVGE-----------GICHQVLPE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++G DSHTCT GA G F+TGIG+TD V GK+ KVP TLRF ++G +
Sbjct: 108 KGHIVPGEVVVGADSHTCTHGALGAFSTGIGSTDMAMVFSEGKLWFKVPETLRFEINGSL 167
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ AKD+IL+IIGE+ V GATYK+ EF G ++ +S+ ERM LCNM +E GGK G+V
Sbjct: 168 DKYVTAKDVILKIIGEVGVDGATYKACEFSGEVMKNMSISERMVLCNMAIEMGGKTGLVE 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ +T+ +E +D + L ++ LEP VA PH+ DN E +
Sbjct: 228 PDEKTLNYIKKRTTKKFEIFKTDVDSPSLETMEINVENLEPQVACPHNVDNVKPVSEVEG 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID++++GSCT G+ +D AAK+ V ++PA+++++
Sbjct: 288 VEIDQIFLGSCTNGRLKDLRDAAKIIKGHEIADNVRMLVIPASREIYKRALN-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG +P CG CLGG
Sbjct: 340 EGLIKIFLEAGA-VVCNPCCGPCLGG 364
>gi|296109585|ref|YP_003616534.1| homoaconitate hydratase family protein [methanocaldococcus infernus
ME]
gi|295434399|gb|ADG13570.1| homoaconitate hydratase family protein [Methanocaldococcus infernus
ME]
Length = 424
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 226/391 (57%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RAS K ++SPGD V +D M HD+ GP + KK E KVWD EK
Sbjct: 2 GMTIVEKILARASGKKEVSPGDIVMAKIDRAMVHDITGPLTVNTLKKYNIE--KVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI+ DH + +A N ++R+F EQNIKYFYDI++ GVCH L +
Sbjct: 60 IVILFDHQVPADSIKAAENHILMRNFVKEQNIKYFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEVL+G DSHTCT GA G FATGIG+TD V TG++ KVP T+ F + GE+
Sbjct: 109 KGHVAPGEVLVGADSHTCTHGALGAFATGIGSTDMAHVFATGELWFKVPETIYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ +KD+IL IIGE+ V GATYK+ +F G TV+ +S+ RMT+ NM +E GGK G++
Sbjct: 169 KPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKNMSIASRMTMTNMAIEMGGKTGIIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y+++ T ++P+ DE A F Y + K+EP+ A PH+ DN
Sbjct: 229 PDEKTINYVKEAMEKHGTLREFKPIKGDEDAEFSEVYEIEADKIEPVFACPHNVDNVKQC 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A V G + V + PA+++ ++
Sbjct: 289 REVAGKPIDQVFIGSCTNGRLEDLRMAINVIEKHGGIAEDVRVIVTPASREEYLKALK-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGIIEKFIKYGC-VVTNPSCSACMG 370
>gi|217967578|ref|YP_002353084.1| 3-isopropylmalate dehydratase large subunit [Dictyoglomus turgidum
DSM 6724]
gi|217336677|gb|ACK42470.1| 3-isopropylmalate dehydratase, large subunit [Dictyoglomus turgidum
DSM 6724]
Length = 424
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 235/401 (58%), Gaps = 24/401 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + S K ++ PG+ ++V +D L+ +D+ GP + F+K E KV+D EKI
Sbjct: 3 MTITEKILADHSSKKEVFPGELIFVKLDFLLANDITGPLAIKEFEKIGVE--KVFDNEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH D ++ ILR+F +Q IKY+Y++ +G + H L +E
Sbjct: 61 ALVPDHSTPNKDIKSAMQSKILREFAKKQGIKYYYEVGRVG----------IEHALLPEE 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ ++G DSHTCT GA G F+TG+G+TD + + TG++ LKVP +++FV G++
Sbjct: 111 GLVLPGDAIIGADSHTCTYGALGAFSTGVGSTDLAYAMATGEIWLKVPESIKFVYYGKLS 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA YK+MEF G + LSM +R+T+CNM +EAG KNG++
Sbjct: 171 QWVTGKDLILYTIGQIGVDGARYKAMEFTGEVIRNLSMSDRLTICNMAIEAGAKNGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD 367
D T +Y+ ++ ++ SDE A + Y +D++ LEP+VA PH P N + ++ KD
Sbjct: 231 DEITLEYVRNRAKRNFKVYKSDEDAHYKEIYEWDVTNLEPIVAFPHLPSNIKKISDIGKD 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+VYIGSCT G+ ED AAK+ V + PAT V+M
Sbjct: 291 IYIDQVYIGSCTNGRIEDLRLAAKILKGHKVHKDVRLIVTPATPNVYMQALK-------- 342
Query: 428 KTCSQIFEEAGCD-TPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF E G TP PSCG CLGG A + +A+
Sbjct: 343 EGLIEIFLEVGASITP--PSCGPCLGGHLGVLAEGEKAVAT 381
>gi|410721998|ref|ZP_11361316.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410597947|gb|EKQ52548.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 416
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 228/386 (59%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+ EKI ++A+ + GD V N+D+ MTHD+ GP S F+K E KVWD EK
Sbjct: 2 AMTMAEKILAKAAGLNETVAGDIVMANIDVAMTHDLTGPLSVESFQKIGVE--KVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + A +N +R+F +Q I FYD+++ GVCH L +
Sbjct: 60 IVVLFDHQVPADSLEAAQNHIFMREFVDKQGINNFYDVRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++GTDSHTCT GA G FATGIG+TD V TGK+ KVP T++F ++G++
Sbjct: 109 KGHVIPGEVIVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFKVPETIKFEIEGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ +KD++L IIG+I GATY++ EF G T +S+ +RM LCNM +E GGK G+V
Sbjct: 169 GQHVYSKDVVLNIIGQIGADGATYQACEFGGETTRNMSVSQRMALCNMAIEMGGKTGMVE 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T KYL+ +T+ PY+ +DE A L+ +++ LEP +A PH+ DN E +
Sbjct: 229 VDEKTIKYLKGRTNKPYQAFTTDEDADSLTTMYVNVNDLEPQIACPHNVDNVKPVSEVEG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V++GSCT G+ +D AA++ V ++PA+++++
Sbjct: 289 TPIDQVFLGSCTNGRLDDLQVAAEILKGKQISNDVRMLVIPASREIYRQALD-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG +P CG CLGG
Sbjct: 341 EGLMNIFVDAGA-LVCNPCCGPCLGG 365
>gi|336121235|ref|YP_004576010.1| 3-isopropylmalate dehydratase large subunit [Methanothermococcus
okinawensis IH1]
gi|334855756|gb|AEH06232.1| 3-isopropylmalate dehydratase large subunit [Methanothermococcus
okinawensis IH1]
Length = 424
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 226/390 (57%), Gaps = 28/390 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL+EKI ++AS +SPGD V ++ M HD+ GP + K E + KVWD EKI
Sbjct: 3 MTLSEKILAKASGNKTVSPGDIVMAKIETAMAHDITGPLTVNTLKNEGID--KVWDNEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH I A N ++R F EQNIK FYDI++ GVCH L ++
Sbjct: 61 VILFDHQIPADSITAAENHILMRKFVKEQNIKNFYDIRE-----------GVCHQVLPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH PG VL+G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + GE+
Sbjct: 110 GHVLPGTVLVGADSHTCTHGAFGAFATGIGSTDMAAVFATGELWFKVPETLYFNITGELK 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+++KD+IL IIGE+ GATYK+ ++ G TV+ +++ RMT+ NM +E G K G++
Sbjct: 170 PYVMSKDVILHIIGEVGFDGATYKAAQYGGETVKNMTIASRMTMSNMAIEMGAKTGIIEP 229
Query: 309 DGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T Y++ T+ P+EP+ +DE A + + +++ LEP+ A PH+ DN AR
Sbjct: 230 DEKTINYVKTAMEKHGTTRPFEPLKADEDAEYEEVFEIEVNDLEPVFACPHAVDNVKQAR 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLPV 422
E ID+V+IGSCT G+ ED AA KV G + + PA+++V +
Sbjct: 290 EVAGRPIDQVFIGSCTNGRLEDLRAAIKVIEEHGGIADDIRVVVTPASREVMLAAIE--- 346
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q F + GC +PSC AC+G
Sbjct: 347 -----EGIIQKFYKYGC-VVTNPSCSACMG 370
>gi|15679385|ref|NP_276502.1| 3-isopropylmalate dehydratase large subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122330|sp|O27439.1|LEUC1_METTH RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|2622496|gb|AAB85863.1| 3-isopropylmalate dehydratase, LeuD subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 419
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 227/386 (58%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT++EKI +RAS K ++ G+ V ++D+ MTHD+ GP S F+ GE+ +VWD EK
Sbjct: 2 SMTVSEKILARASGKDRVEAGEIVMADIDVAMTHDLTGPLSVESFRA-IGED-RVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+I DH + A +N I+RDF EQ I+ FYD+++ GVCH L +
Sbjct: 60 IVVIFDHQVPADSIEAAQNHMIMRDFVEEQGIRNFYDVRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++GTDSHTCT GA G FATGIG+TD V TGK+ +VP TLRF + G++
Sbjct: 109 KGHVVPGEVVVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFRVPETLRFDVRGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ AKD+IL IIG + GATY + EF G TV +S+ +RM L NM +E GGK G+V
Sbjct: 169 REHVYAKDVILNIIGRVGADGATYMACEFAGETVAEMSVSDRMVLSNMAIEMGGKTGIVE 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+ ++ P+ +D A LS D+S LEP VA PH+ DN E +
Sbjct: 229 PDEKTLNYVRRRSGKPWRVFKTDPDAPSLSVMEVDVSDLEPQVACPHNVDNVKPVTEVEG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ID+V++GSCT G+ D AA + V ++PA+++V+
Sbjct: 289 TEIDQVFLGSCTNGRLSDLRDAAAILKNRKVSDSVRMLVIPASREVYRRALD-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG +P CG CLGG
Sbjct: 341 EGLIEIFVDAGA-LVCNPCCGPCLGG 365
>gi|206901326|ref|YP_002250913.1| 3-isopropylmalate dehydratase, large subunit [Dictyoglomus
thermophilum H-6-12]
gi|206740429|gb|ACI19487.1| 3-isopropylmalate dehydratase, large subunit [Dictyoglomus
thermophilum H-6-12]
Length = 424
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 233/401 (58%), Gaps = 24/401 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + S K ++ PG+ ++V +D ++ +D+ GP + F+K E KV+D E+I
Sbjct: 3 MTITEKILADHSGKKEVFPGELIFVKLDFILANDITGPLAIKEFEKIGVE--KVFDNERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+IPDH D ++ +LR+F Q I+Y+Y++ +G + H L +E
Sbjct: 61 ALIPDHSTPNKDIKSAMQSKMLREFAKRQGIEYYYEVGRVG----------IEHALLPEE 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ ++G DSHTCT GA G F+TG+G+TD + + TG++ LKVP +++FV G++P
Sbjct: 111 GLVLPGDAIIGADSHTCTYGALGAFSTGVGSTDLAYAMATGEIWLKVPESIKFVYYGKLP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG I V GA YK+MEF G + L M +R+T+CNM +EAG KNG++
Sbjct: 171 QWVTGKDLILYTIGNIGVDGARYKAMEFTGEVIRNLPMSDRLTICNMAIEAGAKNGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD 367
D T Y+ ++ ++ SDE A + Y +D+S LEP+VA PH P N + ++ KD
Sbjct: 231 DEITLDYVRNRAKRDFKIYKSDEDAQYKEVYEWDVSDLEPIVAFPHLPSNIKKISEISKD 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+VYIGSCT G+ ED AAK+ V + PAT ++M
Sbjct: 291 IYIDQVYIGSCTNGRIEDLRIAAKILKGHKVHKDVRLIITPATPNIYMQALK-------- 342
Query: 428 KTCSQIFEEAGCD-TPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF EAG TP PSCG CLGG A + +A+
Sbjct: 343 EGLIEIFLEAGASITP--PSCGPCLGGHLGVLAEGEKAVAT 381
>gi|159905903|ref|YP_001549565.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
maripaludis C6]
gi|159887396|gb|ABX02333.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C6]
Length = 424
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 225/391 (57%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMTL EKI ++AS Q+SPGD V V+ M HD+ GP S KKE +KVWD EK
Sbjct: 2 AMTLAEKILAKASGNTQVSPGDIVMAKVETAMVHDITGPLSVNTLKKE--GISKVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH I N ++R+F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVIPFDHQIPADSINTAENHILMRNFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG V++G DSHTCT GAFG FATGIG+TD V TG++ KVP T F + GE+
Sbjct: 109 KGHVVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAVFATGELWFKVPETFYFNISGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++KD+IL IIG + GATYK+ +F G TV+ +++ RM++ NM +E GGK G++
Sbjct: 169 KPEVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMSMSNMAIEMGGKAGLIA 228
Query: 308 ADGTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T Y++ + T+ P+E + D+ A F ++ ++ LEP++A PH+ DN
Sbjct: 229 PDDKTINYVKNAMETNNTAKPFEFILGDKNAEFEEKFEIEVDNLEPVMACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED AA V G K + + PA++ V ++
Sbjct: 289 REVAGTPIDQVFIGSCTNGRIEDLRAALNVIEKHGGISKDIRVVVTPASRSVMLEAID-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + F + GC +PSC AC+G
Sbjct: 347 ------EGLIKKFYQYGC-VVTNPSCSACMG 370
>gi|118576667|ref|YP_876410.1| 3-isopropylmalate dehydratase large subunit [Cenarchaeum symbiosum
A]
gi|118195188|gb|ABK78106.1| 3-isopropylmalate dehydratase large subunit [Cenarchaeum symbiosum
A]
Length = 429
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 232/388 (59%), Gaps = 22/388 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA---KVWD 124
A+ +TEKI +RAS + +SPGD ++ +VD M HDV GPG +F++ G+ K+WD
Sbjct: 6 AVNVTEKILARASGRESVSPGDVIFADVDKAMVHDVSGPGVMKVFERISGQGVDTKKLWD 65
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
K+ I DH++ ++D+ + N+ L+DF I+ +FK G+CH
Sbjct: 66 PSKVWIAEDHFVPSADKISAGNIIKLQDFARNYGIRR--------HFKYGMGQYGICHTL 117
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+E PGEV +G DSHT T GA G FA G+G+TD +VL GK+ KVP T+ L+
Sbjct: 118 SHEEALVLPGEVYVGGDSHTNTTGALGAFACGLGHTDMAYVLLYGKIWFKVPETVLLRLN 177
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G +P +++AKD IL+IIG++ G Y++M+F GT + +S+E R+TL NM EAG KNG
Sbjct: 178 GALPPHVMAKDYILRIIGDMGTDGGAYRTMQFAGTGITEMSVEGRLTLANMTTEAGAKNG 237
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ AD T YL + + +PV D+ A + + ++ S++EPLVAKP+SP+N ++ RE
Sbjct: 238 IIEADKKTAGYLSSRGATGIKPVIGDDDAEYSEVFEYEGSEMEPLVAKPYSPENVSIVRE 297
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
V++D+ YIGSCTG K ED AAA++ G+KV++ T ++PA ++ + G
Sbjct: 298 APSVELDKAYIGSCTGAKMEDLEAAARIL--KGRKVRIRTEVLPAAISIYRKAVERGLVG 355
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
IF +AG T P+CGAC G
Sbjct: 356 --------IFLDAGA-TVGPPTCGACCG 374
>gi|407461945|ref|YP_006773262.1| 3-isopropylmalate dehydratase [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045567|gb|AFS80320.1| 3-isopropylmalate dehydratase [Candidatus Nitrosopumilus koreensis
AR1]
Length = 423
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 230/395 (58%), Gaps = 22/395 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN---AKVWDR 125
M + EKI +RAS K Q++P D V+ NVD +M HDV GPG +F K + +K+WD
Sbjct: 1 MNIVEKILARASGKSQVTPDDVVFANVDKVMVHDVSGPGVIKVFDKLKNKGVDVSKLWDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ ++++ + N+ L +F I+ +FK G+CH
Sbjct: 61 SKVWVAEDHFVPSAEKVSAENIVKLSNFTKSYGIEK--------HFKYGMGQYGICHTLS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+V +G DSHT T GA G FA G+G+TD +VL GK+ KVP T F L+G
Sbjct: 113 HEEALVMPGDVYVGGDSHTNTTGALGAFACGLGHTDVAYVLLNGKIWFKVPETDYFKLNG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++PD+++AKDLIL+IIG+I G Y++M+F G+ ++ +S+E R+TLCNM EAG KNG+
Sbjct: 173 KLPDHVMAKDLILKIIGDIGTDGGNYRTMQFGGSGIDEMSVESRLTLCNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
V AD YL + + D+ A + + Y ++ SKLEPLVAKP SP+N A+ RE
Sbjct: 233 VEADQKVVDYLASRGATNAHVFRGDDDAQYANVYEYEASKLEPLVAKPFSPENIAVVREA 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+ YIGSCTG K ED AAAK+ G+ VK+ T ++PA+ ++
Sbjct: 293 PSVELDKSYIGSCTGAKYEDLEAAAKIL--KGRTVKIRTEILPASISIYKRAME------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
IF +AG T P+CGAC G A+
Sbjct: 345 --NGLLSIFLDAGV-TVGPPTCGACCGAHMGVLAK 376
>gi|374637088|ref|ZP_09708598.1| homoaconitate hydratase family protein [Methanotorris formicicus
Mc-S-70]
gi|373556892|gb|EHP83388.1| homoaconitate hydratase family protein [Methanotorris formicicus
Mc-S-70]
Length = 424
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 227/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTL EKI ++AS K ++SPGD V ++ M HD+ GP + KKE E KVWD EK
Sbjct: 2 GMTLAEKILAKASGKKEVSPGDIVMAKIETAMVHDITGPLTVNTLKKEGIE--KVWDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI+ DH + A N ++R F EQNIK+FYDI++ GVCH L +
Sbjct: 60 IVILFDHQVPADSINAAENHILMRKFVKEQNIKHFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG VL+G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + GE+
Sbjct: 109 KGHVVPGTVLVGADSHTCTHGAFGAFATGIGSTDMAAVFATGELWFKVPETLYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+++KD+IL IIG++ GATYK+ +F G TV+ +S+ RMT+ NM +E GGK G++
Sbjct: 169 KPYVMSKDVILHIIGKVGADGATYKACQFGGETVKNMSISSRMTMTNMAIEMGGKTGLIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T +Y+++ T +E + +DE A + + +++ LEP++A PH+ DN
Sbjct: 229 PDEKTIQYVKNAMKKHGTERTFEIIKADEDAEYEEVFEIEVNDLEPMIACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGK-KVKVPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A ++ G + + PA+++V +
Sbjct: 289 REVAGTPIDQVFIGSCTNGRLEDLRIAIEIIEKHGGISDDIRVVVTPASREVMLKAME-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q F + C +PSC AC+G
Sbjct: 347 ------EGIIQKFYKYEC-VVTNPSCSACMG 370
>gi|333910462|ref|YP_004484195.1| 3-isopropylmalate dehydratase large subunit [Methanotorris igneus
Kol 5]
gi|333751051|gb|AEF96130.1| 3-isopropylmalate dehydratase large subunit [Methanotorris igneus
Kol 5]
Length = 424
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 228/391 (58%), Gaps = 28/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTL EKI ++AS K ++SPGD V ++ M HD+ GP + KKE + KVWD EK
Sbjct: 2 GMTLAEKILAKASGKKEVSPGDIVMAKIETAMVHDITGPLTVNTLKKEGIK--KVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + A N ++R F EQ IKYFYDI++ GVCH L +
Sbjct: 60 IVVLFDHQVPADSINAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG VL+G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + GE+
Sbjct: 109 KGHVVPGTVLVGADSHTCTHGAFGAFATGIGSTDMAAVFATGELWFKVPETLYFNITGEL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+++KD+IL IIGE+ GATYK+ +F G TV+ +S+ RMT+ NM +E GGK G++
Sbjct: 169 KPYVMSKDVILHIIGEVGADGATYKACQFGGETVKNMSIASRMTMTNMAIEMGGKTGLIE 228
Query: 308 ADGTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T +Y+++ T P+E + +DE A + + +++ LEP++A PH+ DN
Sbjct: 229 PDEKTIQYVKNAMKKHGTEKPFEVIKADEDAEYEEVFEVEVNDLEPMIACPHNVDNVKAV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLP 421
RE ID+V+IGSCT G+ ED A K+ G V + PA+++V +
Sbjct: 289 REVAGTPIDQVFIGSCTNGRLEDLRIAIKIIEEHGGIADDVRVIVTPASREVMLKAME-- 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q F + GC +PSC AC+G
Sbjct: 347 ------EGIIQKFYKYGC-VVTNPSCSACMG 370
>gi|340344287|ref|ZP_08667419.1| 3-isopropylmalate dehydratase [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519428|gb|EGP93151.1| 3-isopropylmalate dehydratase [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 423
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 230/395 (58%), Gaps = 22/395 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIF---KKEFGENAKVWDR 125
M +TEKI +RAS + +++P D ++ NVD +M HDV GPG +F KK+ K+WD
Sbjct: 1 MNITEKILARASGRQRVAPDDVIFANVDKVMVHDVSGPGVIKVFDKLKKQGINVDKLWDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ ++D+ + NV L +F I+ +FK G+CH
Sbjct: 61 TKVWVAEDHFVPSADKMSAENVVKLSNFTKNYGIEK--------HFKYGMGQYGICHTLS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PGEV +G DSHT T GA G FA G+G+TD +VL GK+ KVP TL F L+G
Sbjct: 113 HEEALVLPGEVYVGGDSHTNTTGALGSFACGLGHTDVAYVLLNGKIWFKVPQTLYFKLNG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++PD+++AKD IL+IIG+IS G YK+M+F G+ + +S+E R+T+CNM EAG KNG+
Sbjct: 173 KLPDHVMAKDFILKIIGDISTEGGAYKTMQFGGSGISEMSVESRLTMCNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
V D YL + + V+ D A + Y ++ S++EPLVAKP SP+N + RE
Sbjct: 233 VEPDQKVVDYLTSRGAKNITLVHGDADAEYEKIYEYEGSEMEPLVAKPFSPENITIVREA 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+ YIGSCTG K ED AAAK+ G+ VK+ T ++PA+ ++
Sbjct: 293 PSVELDKSYIGSCTGAKYEDLEAAAKIL--KGRTVKIRTEILPASISIYKRAME------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+IF +AG T P+CGAC G A+
Sbjct: 345 --NGLLKIFLDAGV-TVGPPTCGACCGAHMGVLAK 376
>gi|150399223|ref|YP_001322990.1| 3-isopropylmalate dehydratase large subunit [Methanococcus
vannielii SB]
gi|150011926|gb|ABR54378.1| homoaconitate hydratase family protein [Methanococcus vannielii SB]
Length = 424
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 229/400 (57%), Gaps = 34/400 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI ++AS Q+SPGD V V+ M HD+ GP S KKE E KVWD EKI
Sbjct: 3 MTLAEKILAKASGNSQVSPGDIVMAKVETAMVHDITGPLSVNTLKKEGIE--KVWDNEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DH I A N ++R+F EQ IK+FYDI++ GVCH L ++
Sbjct: 61 VIPFDHQIPADSINAAENHILMRNFVKEQGIKHFYDIRE-----------GVCHQVLPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH PG V++G DSHTCT GAFG FATGIG+TD V TG++ KVP T+ F + G +
Sbjct: 110 GHVVPGTVIVGADSHTCTYGAFGSFATGIGSTDMAAVFATGELWFKVPETMYFNISGHLK 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++KD+IL IIG + GATYK+ +F G TV+ +++ RMT+ NM +E GGK G++
Sbjct: 170 PEVMSKDIILSIIGMVGADGATYKAAQFAGETVKEMTIASRMTMSNMAIEMGGKAGLIEP 229
Query: 309 DGTTFKYL-----EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+ ++ T+ P++ + D+ A + ++ +++ LEP++A PH+ DN R
Sbjct: 230 DRKTVEYVKTAMEKNNTARPFDIIIGDKNAEYEEKFEIEVNDLEPVMACPHNVDNVKTVR 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLPV 422
E ID+V+IGSCT G+ ED AA V G K + + PA++ V +
Sbjct: 290 EVSGTPIDQVFIGSCTNGRIEDLRAALNVIEKHGGISKDIRVIVTPASRSVMLKALD--- 346
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG------GPKD 456
+ Q F + GC +PSC AC+G GPK+
Sbjct: 347 -----EGLIQKFYKYGC-VVTNPSCSACMGALYGLLGPKE 380
>gi|167045216|gb|ABZ09876.1| putative aconitase family (aconitate hydratase) [uncultured marine
crenarchaeote HF4000_APKG8O8]
Length = 423
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/396 (40%), Positives = 229/396 (57%), Gaps = 23/396 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA----KVWD 124
M +TEKI +RAS K +L PGD V+ NVD +M HDV GPG F+K + K++D
Sbjct: 1 MNITEKILARASGKDKLEPGDVVFANVDKVMLHDVSGPGVIKTFEKLEKDGVVKVDKLFD 60
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+ + DH++ ++D+ + N+ L F + IK +FK G+CH
Sbjct: 61 PSMVWVAEDHFVPSADKISAENISKLSKFTSKFGIKK--------HFKYGLGQYGICHTL 112
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+EG PGE+ +G DSHT T GA G FA G+G+TD +VL G + KVP TL F +
Sbjct: 113 SHEEGLVSPGELYIGGDSHTNTTGALGAFACGLGHTDVAYVLLNGNLWFKVPETLYFKIS 172
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+Y +AKDLIL+IIG+I+ G +M+F G + +S+E R+TL NM EAG KNG
Sbjct: 173 GKLPEYTMAKDLILKIIGDITTEGGAGCAMQFGGDGISDMSVESRLTLTNMTTEAGAKNG 232
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ D F YL ++ Y+ VY DE A + Y +D+S+LEPLVAKP SP N ++ +E
Sbjct: 233 IIEPDQKVFDYLAERGVTEYDAVYDDEDAQYAKTYEYDVSELEPLVAKPFSPQNVSVVQE 292
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
++ID+ YIGSCTG K ED +A A++ G+KVKV T +VPA ++
Sbjct: 293 TTGIEIDKSYIGSCTGAKYEDLVAVARIL--KGRKVKVRTEVVPAAISIYKK-------- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ +IF +AG +P+CGAC G A+
Sbjct: 343 ASENGLDKIFLDAGA-VIGAPTCGACCGAHMGVLAK 377
>gi|298675275|ref|YP_003727025.1| 3-isopropylmalate dehydratase [Methanohalobium evestigatum Z-7303]
gi|298288263|gb|ADI74229.1| 3-isopropylmalate dehydratase [Methanohalobium evestigatum Z-7303]
Length = 413
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 230/386 (59%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
T++EKIFSRAS + Q+ + V +VD M HD G+ + K F + KVW+ E+
Sbjct: 3 TISEKIFSRASGE-QVKADEFVIADVDYAMAHD----GTSILAVKSFRDMGVEKVWNPER 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH + E + +R++ +Q I++FY+I GVCH L +
Sbjct: 58 IVIPFDHLAPANTEITASLQNDIRNWINDQQIEHFYEIG-----------YGVCHQVLPE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG++L+G DSHTCT GAFG FATG+G TD + +GK+ KVP +++ +DG +
Sbjct: 107 NGFAMPGKLLVGADSHTCTYGAFGSFATGVGATDMAEIFASGKLWFKVPESIKITVDGTL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ AKDL L IIG++ AGATYK++EF G +E LSM RMTLCNM +E G K G+VP
Sbjct: 167 KNHVYAKDLTLYIIGKMGSAGATYKAVEFYGDVIENLSMSGRMTLCNMAIEMGAKTGIVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TF+YL+++ YEPVYSDE A + EY + +LEP VAKPHS DN A +
Sbjct: 227 PDDKTFEYLKNRAVEDYEPVYSDEDAIYSEEYHINADELEPQVAKPHSVDNVANVTDVSG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
K+D+V+IG+CT G+ ED AA++ GKKV V T +VPA++ ++
Sbjct: 287 TKVDQVFIGTCTNGRLEDLEVAAEIL--KGKKVSVRTIIVPASRSTMIEAVN-------- 336
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
++I +AG T +P CG CLGG
Sbjct: 337 NGTAEILLDAGA-TFGTPGCGPCLGG 361
>gi|408381001|ref|ZP_11178551.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium
formicicum DSM 3637]
gi|407816266|gb|EKF86828.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium
formicicum DSM 3637]
Length = 416
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 227/386 (58%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT+ EKI ++++ + G+ V N+D+ MTHD+ GP S F+K E KVWD EK
Sbjct: 2 SMTMAEKILAKSAGLKETEAGNIVMANIDVAMTHDLTGPLSVESFQKIGVE--KVWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + A +N +R+F +Q I FYD+K+ GVCH L +
Sbjct: 60 IVVLFDHQVPADSLEAAQNHIFMREFVDKQGINNFYDVKE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++GTDSHTCT GA G FATGIG+TD V TGK+ KVP T++F ++G++
Sbjct: 109 KGHVIPGEVVVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFKVPETIKFEIEGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ +KD++L IIG+I GATY++ EF G T +S+ +RM LCNM +E GGK G+V
Sbjct: 169 GRHVYSKDVVLNIIGQIGADGATYQACEFGGETTSNMSVSQRMALCNMAIEMGGKTGMVE 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+ +T+ PY+ +DE A L+ +++ LEP +A PH DN E +
Sbjct: 229 VDEKTIQYLKGRTNKPYQAFKTDEDADSLTTMYVNVNDLEPQIACPHHVDNAKPVTEVEG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V++GSCT G+ +D AA++ V ++PA+++++
Sbjct: 289 TPIDQVFLGSCTNGRLDDLQVAAEILKGKQISSDVRMLVIPASREIYRQALD-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG +P CG CLGG
Sbjct: 341 QGLMNIFVDAGA-LVCNPCCGPCLGG 365
>gi|410672018|ref|YP_006924389.1| 3-isopropylmalate dehydratase, large subunit [Methanolobus
psychrophilus R15]
gi|409171146|gb|AFV25021.1| 3-isopropylmalate dehydratase, large subunit [Methanolobus
psychrophilus R15]
Length = 413
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 227/392 (57%), Gaps = 27/392 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFSRA+ K D V +VD M HD G + E KVWD EKIV
Sbjct: 3 TISEKIFSRAAGK-HAKENDFVIADVDCAMAHD--GTSILAVRSFREMEIRKVWDPEKIV 59
Query: 130 IIPDHYI-FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I DH +D A DI R++ EQ IK FYD + G+CH L ++
Sbjct: 60 IPFDHLTPANTDTTAALQKDI-REWVKEQEIKNFYDTGE-----------GICHQLLPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSH+CT GAFG F TG+G TD + TGK+ ++P ++R DG++
Sbjct: 108 GFALPGKLIVGADSHSCTYGAFGAFGTGVGATDMAEIFATGKLWFRIPESIRITADGKLG 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKDL L+IIG + VAGATYK+ EF G+T+E LS+ RMTLCNM +E G K G+VP
Sbjct: 168 KHTHAKDLTLKIIGTLGVAGATYKAAEFYGSTIENLSISGRMTLCNMAIEMGAKAGIVPP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF+YL++++ YEPVY+DE A + EY FD LEP VA PH+ DN E
Sbjct: 228 DRTTFEYLKERSQGSYEPVYADEDAHYSQEYHFDAGTLEPQVACPHNVDNVCNISELPAT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ID+ +IG+CT G+ ED AAA + G+KV V T ++PA+++V++ K
Sbjct: 288 RIDQAFIGTCTNGRLEDLEAAANIL--KGEKVVVRTLVIPASREVFLKAVR--------K 337
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ E+G T +P CG CLGG A+
Sbjct: 338 GIIETLLESGA-TIGTPGCGPCLGGHMGVIAK 368
>gi|442804837|ref|YP_007372986.1| 3-isopropylmalate dehydratase large subunit LeuC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442740687|gb|AGC68376.1| 3-isopropylmalate dehydratase large subunit LeuC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 421
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 237/407 (58%), Gaps = 35/407 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ S ++PG + VD+++ +D+ P + F+K E KV+D EK
Sbjct: 2 GMTMTQKILAKHSGNKYVAPGMLISAKVDMVLGNDITAPVAIKEFEKIGAE--KVFDTEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ V ++R+F + IK+F++I +G V H L +
Sbjct: 60 IALVPDHFTPNKDIKSAEQVKLMRNFARKMGIKHFFEIGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G G++++G DSHTCT GA G F+TG+G+TD + TG+V LKVP ++F L G+
Sbjct: 110 LGLVTAGDLVIGADSHTCTYGALGAFSTGVGSTDMAAAMVTGEVWLKVPEAIKFNLIGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG+I V GA YKSMEF G +E L+M++R T+ NM +EAG KNG+
Sbjct: 170 GEWVSGKDIILHIIGQIGVDGALYKSMEFTGEGLEFLTMDDRFTIANMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T KY+ + +S PYE +D A ++ EY D+SK++P VA PH P+N E D
Sbjct: 230 VDDETLKYIAEHSSKPYEVFTADSDAEYVREYTIDLSKIKPTVALPHLPENTRPVDEIGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ +G+KV V ++PATQ VW
Sbjct: 290 IPIDQVVIGSCTNGRIEDMRIAAKIL--AGRKVHKNVRCIIIPATQNVW----------- 336
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
K C + IF EAGC ++P+CG CLGG A +A+
Sbjct: 337 --KQCLKEGLFDIFIEAGCAV-STPTCGPCLGGHMGILAEGERAVAT 380
>gi|84490267|ref|YP_448499.1| 3-isopropylmalate dehydratase large subunit [Methanosphaera
stadtmanae DSM 3091]
gi|84373586|gb|ABC57856.1| LeuC1 [Methanosphaera stadtmanae DSM 3091]
Length = 418
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 227/386 (58%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT++EKI +++S ++ G+ V ++D M HD+ GP + +K KVWD +K
Sbjct: 2 SMTISEKILAKSSGNEKVEAGEIVMADIDTAMVHDLTGPLTLQALEKI--NTNKVWDPDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVI DH + A +N ILR F EQ IK FYD+ Y+GVCH L +
Sbjct: 60 IVIPFDHQVPADTLDAAKNHQILRKFVKEQGIKNFYDV-----------YEGVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG +++G+DSHTCT GA G F TGIG+TD V TG++ KVP TL+F + G++
Sbjct: 109 KGHVLPGTIVVGSDSHTCTHGALGAFGTGIGSTDMAMVFATGQLWFKVPETLQFNVTGDL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + +KD+IL IIG+I GA YK+ E+ G TV+ + M +RM L NM +E GGK G+VP
Sbjct: 169 KENVTSKDVILNIIGQIGQDGARYKACEYTGETVQNMDMSDRMVLSNMAIECGGKTGIVP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T +YL+++T+ Y +D+ A+ L D+S LEP VA P+ DN A E +D
Sbjct: 229 ADKITDEYLKNRTTKQYTKFTTDKDAASLEVMDIDVSDLEPQVACPNYVDNVKPASEVED 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+V+IGSCT G+ +D AA+V + V T ++PA++ ++
Sbjct: 289 VEIDQVFIGSCTNGRLKDLEQAARVLKGNKINPGVRTLVIPASRTIYKQALD-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG +P CG CLGG
Sbjct: 341 EGLMDIFVDAGA-LICNPCCGPCLGG 365
>gi|288559363|ref|YP_003422849.1| 3-isopropylmalate dehydratase large subunit LeuC
[Methanobrevibacter ruminantium M1]
gi|288542073|gb|ADC45957.1| 3-isopropylmalate dehydratase large subunit LeuC
[Methanobrevibacter ruminantium M1]
Length = 425
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 230/398 (57%), Gaps = 40/398 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SRAS + Q+ GD V ++DI M HD+ GP + F K E +VWD EKIV
Sbjct: 3 TIAEKILSRASGQGQVEAGDIVMADIDIAMMHDLTGPLAVESFNKIGTE--RVWDNEKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + N ++R F EQ+IK FYD+ Y+GVCH L ++G
Sbjct: 61 IPFDHQVPADSLDSANNHILMRKFVKEQDIKNFYDV-----------YEGVCHQVLPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG V++G DSHT T GA G F+TGIG+TD VL TG++ KVP T++F ++G + +
Sbjct: 110 HVIPGTVIVGADSHTTTYGALGAFSTGIGSTDMAMVLSTGQLWFKVPETIQFNIEGILKE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
AKD+IL IIG++ GATYKS EF G T+ +++ +RM L NM +E GGK G++ D
Sbjct: 170 NTSAKDVILNIIGQVGADGATYKSCEFKGETISTMNISDRMVLSNMAIEMGGKTGIIEPD 229
Query: 310 GTTFKYLEDKTS----------LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T++YL+D+ + + +DE +S L D+S LEP +A PH+ DN
Sbjct: 230 NVTYQYLKDRVKDENKNRLKAFIEKSNLKTDEDSSSLETMDIDVSDLEPQIACPHNVDNV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWM 415
A E D++ID+V++GSCT G+ ED AAK+ +ASG ++ ++PA+++ +M
Sbjct: 290 KPASELSDIEIDQVFVGSCTNGRIEDLRDAAKILKGKHIASGLRM----LVIPASRETYM 345
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG A P CG CLGG
Sbjct: 346 KALD--------EGLIKIFVEAGALVSA-PCCGPCLGG 374
>gi|334338965|ref|YP_004543945.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
ruminis DSM 2154]
gi|334090319|gb|AEG58659.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
ruminis DSM 2154]
Length = 420
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 229/385 (59%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + A+ K + PG+ + VD+++ +D+ P + F+K G VWD+E++
Sbjct: 3 MTITEKILAAAAGKDYVKPGELINAKVDLVLANDITAPVAIKEFEK-IGLPG-VWDKERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH++ D ++ ++RDF +Q + +++++ +G + H L ++
Sbjct: 61 ALVPDHFVPNKDIKSAEQAKMVRDFAHKQELTHYFEVGRMG----------IEHCLLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +++FV +G++
Sbjct: 111 GLVGPGDVIIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESIKFVFNGKLN 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G +E+LSM+ R T+CNM +EAGGKNG++
Sbjct: 171 PWVGGKDLILYTIGKIGVDGALYRAMEFCGEAIEQLSMDGRFTMCNMAIEAGGKNGIIQP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+E +T PY SD A + + FD+SK+EP VA PH P+N RE +V
Sbjct: 231 DEITRQYVEGRTKRPYTFYTSDPDAQYAEVHEFDVSKIEPQVAFPHLPENARSIREAGNV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ID+ IGSCT G+ ED AA+V +V ++P TQ+++ +
Sbjct: 291 EIDQAVIGSCTNGRMEDLRIAAQVLKGQKVNRRVRLIVIPGTQEIYRQAMH--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
IF EAG ++P+CG CLGG
Sbjct: 343 GLFDIFLEAGAAV-STPTCGPCLGG 366
>gi|20094876|ref|NP_614723.1| 3-isopropylmalate dehydratase large subunit [Methanopyrus kandleri
AV19]
gi|22001713|sp|Q8TVF2.1|LEUC1_METKA RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|19888106|gb|AAM02653.1| 3-isopropylmalate dehydratase large subunit [Methanopyrus kandleri
AV19]
Length = 418
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 220/384 (57%), Gaps = 23/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SRAS + GD V N+D+ M HD+ GP + + E +VWD KIV
Sbjct: 4 TMAEKILSRASGE-DAEAGDIVVANIDVAMVHDITGP--ITVQRLEEMGVERVWDPSKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + A N I+R+F EQ I++FYD+++ GVCH L ++G
Sbjct: 61 VLFDHQVPADSVEAAENHKIMREFVEEQGIEHFYDVRE-----------GVCHQVLPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG+V++G DSHTCT GA G FATGIG+TD V TGK+ +VP T R + GE+P+
Sbjct: 110 HVRPGDVIVGADSHTCTHGALGAFATGIGSTDMAAVFATGKLWFRVPETYRVEITGELPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L++ GEI GATY ++E+ G V +S+ +RM LCNM +E G K G+VP D
Sbjct: 170 GVYAKDVVLKVTGEIGADGATYMAIEYHGEVVREMSVSDRMCLCNMAIEMGAKTGMVPPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y++ + PV D A + +E D+S LEP VAKP SPDN E + +
Sbjct: 230 EKTLEYVKKRAGTEGRPVEPDPDARYEAELTLDVSDLEPQVAKPFSPDNVVPVGEVEGIA 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+V+IGSCT G+ ED AA+V V ++PA+++V+ V
Sbjct: 290 IDQVFIGSCTNGRYEDLKVAAEVLEGEEVHDDVRLIVIPASREVYHRTLKDGV------- 342
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
++ EAG P+CG CLGG
Sbjct: 343 -LEVLHEAGA-LICPPNCGPCLGG 364
>gi|147676867|ref|YP_001211082.1| 3-isopropylmalate dehydratase large subunit [Pelotomaculum
thermopropionicum SI]
gi|146272964|dbj|BAF58713.1| 3-isopropylmalate dehydratase large subunit [Pelotomaculum
thermopropionicum SI]
Length = 420
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 233/395 (58%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+TEKI + + K Q+ PG+ + V VD+++ +D+ P + F+K G A+V+DRE+
Sbjct: 2 AMTITEKILADHAGKKQVEPGELISVKVDLVLGNDITAPVAIKEFEK-IG-VAEVFDRER 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D ++ ILR+F + N+ ++++ G+ H L +
Sbjct: 60 VALVPDHFTPNKDIKSAEQSKILREFSKKHNLANYFEV----------GRAGIEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG++++G DSHTCT GA G F+TG+G+TD + G+ LKVP +++F DGEM
Sbjct: 110 EGLVGPGDLVIGADSHTCTYGALGAFSTGVGSTDLAAAMALGETWLKVPESIKFEYDGEM 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IG+I V GA YK+MEF G VE+LSM+ R T+CNM VEAGGKNG++
Sbjct: 170 QPWVGGKDMILHTIGDIGVDGALYKAMEFTGPAVEKLSMDGRFTMCNMAVEAGGKNGIIA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TT Y+E + PY SD A + YR+D +++EP VA PH P+N E +
Sbjct: 230 PDETTRVYVEGRCKRPYRFYRSDPDAKYEKIYRYDAAQIEPQVAFPHLPENSRPVSEAGN 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
++ID+V IGSCT G+ ED AA+V G+KV V + P T K+++
Sbjct: 290 IEIDQVVIGSCTNGRMEDLREAARVL--KGRKVHKNVRLIIFPGTPKIYLQALR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F EAG ++P+CG CLGG AR
Sbjct: 342 --EGLIETFVEAG-GVVSTPTCGPCLGGHSGILAR 373
>gi|161527928|ref|YP_001581754.1| 3-isopropylmalate dehydratase [Nitrosopumilus maritimus SCM1]
gi|160339229|gb|ABX12316.1| 3-isopropylmalate dehydratase [Nitrosopumilus maritimus SCM1]
Length = 422
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 229/395 (57%), Gaps = 22/395 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN---AKVWDR 125
M + EKI +RAS K Q++P D V+ VD +M HDV GPG +F K + +K+WD
Sbjct: 1 MNIVEKILARASGKSQVAPDDVVFAKVDKVMVHDVSGPGVLKVFDKLKNKGVDVSKLWDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ ++++ + N+ L +F I+ +FK G+CH
Sbjct: 61 TKVWVAEDHFVPSAEKISAENIVKLSNFTKNYGIEK--------HFKYGMGQYGICHTLS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+V +G DSHT T GA G FA G+G+TD +VL G++ KVP T F L+G
Sbjct: 113 HEEAMVMPGDVYVGGDSHTNTTGALGAFACGLGHTDIAYVLLNGQIWFKVPETDYFKLNG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++PD+++AKDLIL+IIG+I G Y++M+F GT ++ +S+E R+TLCNM EAG KNG+
Sbjct: 173 KLPDHVMAKDLILKIIGDIGTDGGNYRTMQFGGTGIDEMSVESRLTLCNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
AD YL + + + D+ A + + Y ++ S++EPLVAKP SP+N A+ RE
Sbjct: 233 AEADQKVVDYLSSRGATNAQVFKGDDDAQYANVYEYEASEMEPLVAKPFSPENIAVVREA 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+ YIGSCTG K ED AAAK+ GK VK+ T ++PA+ ++
Sbjct: 293 PSVELDKSYIGSCTGAKYEDLEAAAKIL--KGKTVKIRTEILPASISIYKRAME------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
IF +AG T P+CGAC G A+
Sbjct: 345 --NGLLTIFLDAGV-TVGPPTCGACCGAHMGVLAK 376
>gi|332799875|ref|YP_004461374.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438003144|ref|YP_007272887.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332697610|gb|AEE92067.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432179938|emb|CCP26911.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 424
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 235/399 (58%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ S K + PG+ V VD+ + +D+ GP + FKK G V+DREKI
Sbjct: 3 MTITQKILAKHSGKDFVEPGELVMAEVDLALANDITGPVAIEEFKKAGGRT--VFDREKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+IPDH+ D ++ +LR+F Q IK++Y++ +G + H L ++
Sbjct: 61 ALIPDHFAPNKDIKSAELCKMLREFAKTQQIKHYYEVGRMG----------IEHAFLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG+G+TD F + TGK KVP T++F+ G+
Sbjct: 111 GIVLPGDLVVGADSHTCTYGALGAFSTGVGSTDLAFAMMTGKCWFKVPETIKFIYHGKPN 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA YK+MEF G T+ L+++ER+T+ NM +EAGGKNG++
Sbjct: 171 PWVTGKDLILHTIGDIGVDGALYKAMEFTGDTIAHLTIDERLTMSNMAIEAGGKNGIMEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++++ PYE SD A++ +D+ K++P +A PH P+N ++
Sbjct: 231 DEITLEYVKNRAKKPYEVFRSDPDAAYSDIIDYDVKKIQPKIALPHLPENVVDVEAVDNI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+V IGSCT G+ ED AAKV + ++PATQ+V+ ++ +
Sbjct: 291 VIDQVVIGSCTNGRLEDMRLAAKVLKGHKVHPYLRLIIIPATQQVYQEMIK--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
++IF +AG ++P+CG CLGG A+ +A+
Sbjct: 343 GITEIFVDAGA-VVSTPTCGPCLGGYMGILAKGERAVAT 380
>gi|333980251|ref|YP_004518196.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823732|gb|AEG16395.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 420
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 229/387 (59%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + ++ PG + V VD+++ +D+ P + F++ E KV+DRE++
Sbjct: 3 MTITEKILAAHAGLDRVEPGQLINVRVDLVLGNDITAPVAIKEFRRIGVE--KVFDRERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH++ D ++ ILRDF +Q + +++++ +G + H L ++
Sbjct: 61 VLVPDHFVPNKDIKSAEQAKILRDFARQQQLTHYFEVGRMG----------IEHCLLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + G++ LKVP +++FV GE+
Sbjct: 111 GLVGPGDVVIGADSHTCTYGALGAFATGVGSTDLAAAMALGEIWLKVPESVKFVYYGELQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G V+ LSM+ R+T+ NM VEAG KNG+VP
Sbjct: 171 PWVGGKDLILYTIGQIGVDGALYQAMEFTGPAVKTLSMDGRLTMANMAVEAGAKNGIVPP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++ + PY SD A + Y FD+S+LEP VA PH P N + V
Sbjct: 231 DEITLDYVKGRARRPYRVYQSDPGARYARVYEFDVSRLEPQVAFPHLPSNVRPVSQAGHV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
+I +V IGSCT G+ ED AA+V GKKV V ++P TQ+V+
Sbjct: 291 EIQQVVIGSCTNGRLEDLRLAARVL--QGKKVHPDVRLIVIPGTQEVYRTALK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG ++P+CG CLGG
Sbjct: 342 -EGLMEIFIDAGAAV-STPTCGPCLGG 366
>gi|294495101|ref|YP_003541594.1| 3-isopropylmalate dehydratase, large subunit [Methanohalophilus
mahii DSM 5219]
gi|292666100|gb|ADE35949.1| 3-isopropylmalate dehydratase, large subunit [Methanohalophilus
mahii DSM 5219]
Length = 413
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 227/385 (58%), Gaps = 27/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFSRA+ K + D V ++D M HD G + E KVWD +IV
Sbjct: 3 TISEKIFSRAAGK-EAKANDFVIADIDYAMAHD--GTSILAVRSFRQMEVEKVWDPSRIV 59
Query: 130 IIPDHYI-FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I DH SD A DI R + +Q I+ FYDI GN G+CH L ++
Sbjct: 60 IPFDHLAPANSDTTAGLQKDI-RGWVRQQGIRNFYDI---GN--------GICHQVLPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSH+CT GAFG F TG+G TD + +GK+ +VP ++R +G++
Sbjct: 108 GFAMPGKLIVGADSHSCTYGAFGAFGTGVGATDMAEIFASGKLWFRVPESIRITAEGKLD 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
D + AKDL L+IIGE++ +GATYK++EF G +E LSM RMTL NM +E G K G+VP
Sbjct: 168 DRVCAKDLTLKIIGEVTASGATYKAVEFYGDAIENLSMAGRMTLSNMAIEMGAKAGIVPP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF+YL+++ YEPVYSD A +++EY D++ LEP VA PH DN
Sbjct: 228 DATTFEYLKNRAVSDYEPVYSDGDADYVAEYHIDVNSLEPQVACPHEVDNVCGVSGIAGK 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+ +IG+CT G+ ED AAA+V G +V V T ++PA++++ + + K
Sbjct: 288 KLDQAFIGTCTNGRLEDLEAAAEVL--KGNEVAVRTIIIPASRQIMKEAAS--------K 337
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+IF +AG T +P CG CLGG
Sbjct: 338 GLIEIFLDAGA-TMGTPGCGPCLGG 361
>gi|323703252|ref|ZP_08114904.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
nigrificans DSM 574]
gi|323531808|gb|EGB21695.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
nigrificans DSM 574]
Length = 420
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 233/403 (57%), Gaps = 29/403 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MT+TEKI ++A+ K + PGD + VD+++ +D+ GP + KEF + +VWD++
Sbjct: 3 MTITEKILAKAAGKDSVKPGDLINAKVDLVLANDITGP----VAIKEFAKIGVDRVWDKD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++ ++PDH+ D ++ ++RDF Q + ++++ +G + H L
Sbjct: 59 RVALVPDHFTPNKDIKSAEQAKMVRDFAHNQELTSYFEVGRMG----------IEHCLLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +++FV +G+
Sbjct: 109 EQGLVGPGDVIIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESIKFVYNGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ KDLIL IG I V GA Y++MEF G + +LSM+ R T+CNM +EAGGKNG++
Sbjct: 169 LNKWVGGKDLILYTIGRIGVDGALYRAMEFCGEAISQLSMDGRFTMCNMAIEAGGKNGII 228
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y+E +T PY SD A + Y FD++K+EP VA PH P+N E
Sbjct: 229 QPDEITRQYVEGRTKRPYTFFTSDPDAQYAEVYEFDVTKIEPQVAFPHLPENARPVSEAG 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
V ID+ IGSCT G+ ED AA+V GKKV +V ++P TQ+++
Sbjct: 289 QVDIDQAVIGSCTNGRMEDLRLAAEVL--KGKKVNKRVRLIIIPGTQEIYRQAMR----- 341
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 ---EGLFDIFLDAGA-VISTPTCGPCLGGHMGILAKGERCIAT 380
>gi|325957927|ref|YP_004289393.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
AL-21]
gi|325329359|gb|ADZ08421.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
AL-21]
Length = 416
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 225/388 (57%), Gaps = 26/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI ++AS+K + G+ V N+D+ MTHD+ GP S F+K E+ VWD EK
Sbjct: 2 GMTMAEKILAKASDKSVVEAGEIVMANIDVAMTHDLTGPLSVESFEKIGVED--VWDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH + A N I+R F EQ I FYD+++ GVCH L +
Sbjct: 60 IVVVFDHQVPADSLDAVGNHMIMRKFVEEQKINNFYDVRE-----------GVCHQVLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PGEV++GTDSHTCT GA G F+TGIG+TD V TGK+ K+P T++F + G++
Sbjct: 109 KGHVVPGEVIVGTDSHTCTHGALGAFSTGIGSTDMAMVFATGKLWFKIPETIKFDITGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKD++L IIG++ GATYK+ EF G +S+ +RM +CNM +E GGK G+V
Sbjct: 169 KDNVFAKDVVLNIIGKVGADGATYKACEFGGEVTSAMSISDRMVMCNMAIEMGGKTGLVE 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL+ +T+ YE + +D A L ++ LEP +A PH+ DN E +
Sbjct: 229 PDQKTINYLKGRTTKNYEIMKTDNDAESLETVHINVDDLEPQIACPHNVDNVKPVSEVEG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
ID++++GSCT G+ D AAK+ GK+V V ++PA+++++
Sbjct: 289 THIDQIFLGSCTNGRISDLRTAAKIM--KGKEVARGVRMLVIPASREIYTKALD------ 340
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AG +P CG CLGG
Sbjct: 341 --EGLLRTFVDAGA-LVCNPCCGPCLGG 365
>gi|150400724|ref|YP_001324490.1| 3-isopropylmalate dehydratase large subunit [Methanococcus aeolicus
Nankai-3]
gi|150013427|gb|ABR55878.1| homoaconitate hydratase family protein [Methanococcus aeolicus
Nankai-3]
Length = 425
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 221/392 (56%), Gaps = 29/392 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD-RE 126
AMTL EKI ++AS ++PGD V ++ M HD+ GP + K E E KVWD E
Sbjct: 2 AMTLAEKILAKASGNKTVAPGDIVMAKIETAMAHDITGPLTVNTLKNEGIE--KVWDNEE 59
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI I+ DH I A N +LR F EQ IK FYDI++ GVCH L
Sbjct: 60 KITILFDHQIPADSITAAENHALLRKFVKEQGIKNFYDIRE-----------GVCHQVLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++GH PG V +G DSHTCT GAFG FATGIG+TD V TG++ KVP TL F + G+
Sbjct: 109 EKGHVLPGTVAVGADSHTCTYGAFGTFATGIGSTDMAAVFATGELWFKVPETLYFNVSGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ D++ +KD+IL+IIGE+ GATYK+ ++ G TVE +S+ RMT+ NM +E G K G++
Sbjct: 169 LNDFVTSKDVILKIIGEVGFDGATYKAAQYGGETVEEMSISSRMTMSNMAIEMGAKAGLI 228
Query: 307 PADGTTFKYL-----EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
D T ++ + T+ PY + DE A F Y +++ LEPL A PH+ DN
Sbjct: 229 EPDVKTTYFIKRAMQKHGTTRPYTALKGDEDAKFEETYEIEVNDLEPLFACPHAVDNVKT 288
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTL 420
ARE ID+V+IGSCT G+ ED AA + G V + PA+++V ++
Sbjct: 289 AREVAGRPIDQVFIGSCTNGRVEDLRAAINIIDQHGGIADDVRVVVTPASREVMLEAIN- 347
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q F E GC +PSC AC+G
Sbjct: 348 -------EGIIQKFYEYGC-VVTNPSCSACMG 371
>gi|297618306|ref|YP_003703465.1| 3-isopropylmalate dehydratase, large subunit [Syntrophothermus
lipocalidus DSM 12680]
gi|297146143|gb|ADI02900.1| 3-isopropylmalate dehydratase, large subunit [Syntrophothermus
lipocalidus DSM 12680]
Length = 421
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 232/401 (57%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K Q+ PG+ + VD+++ +D+ P + F+K G +V+D E++
Sbjct: 3 MTMTEKILAYHAGKDQVEPGELISCRVDLVLGNDITAPVAIAEFEK-LGLT-RVFDNERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D + +R+F +I+ ++++ +G + H L QE
Sbjct: 61 VLVPDHFTPNKDINSAEQAKQVREFARAYSIENYFEVGKMG----------IEHCLLPQE 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + TG+ KVP T++FV GE+P
Sbjct: 111 GLVVPGDVVIGADSHTCTYGALGAFATGVGSTDMAAGMATGEAWFKVPETMKFVYYGELP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y +MEF G + +LSM+ R T+ NM +EAG KNG+ A
Sbjct: 171 KWVSGKDLILHTIGDIGVDGARYMAMEFTGEAIRKLSMDNRFTMANMAIEAGAKNGIFEA 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+ + PY SD AS+ +D+SK+EP VA PHSP+N + +V
Sbjct: 231 DEITLDYVNSRAKRPYRVFTSDPDASYYEVREYDVSKMEPQVAFPHSPENVRPVSQAGNV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ ED AA + GKKV ++ T ++P TQ+++++
Sbjct: 291 SIDQVVIGSCTNGRIEDLEIAASIL--KGKKVHREIRTIIIPGTQEIYLEALR------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF EAG ++P+CG CLGG A+ +A+
Sbjct: 342 -RGLVEIFIEAGAAV-STPTCGPCLGGHMGILAKGERAVAT 380
>gi|333922509|ref|YP_004496089.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748070|gb|AEF93177.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 420
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 233/403 (57%), Gaps = 29/403 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MT+TEKI ++A+ K + PGD + VD+++ +D+ GP + KEF + +VWD++
Sbjct: 3 MTITEKILAKAAGKDSVKPGDLINAKVDLVLANDITGP----VAIKEFAKIGVDRVWDKD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++ ++PDH+ D ++ ++RDF Q + ++++ +G + H L
Sbjct: 59 RVALVPDHFTPNKDIKSAEQAKMVRDFAHNQELTNYFEVGRMG----------IEHCLLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +++FV +G+
Sbjct: 109 EQGLVGPGDVIIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESIKFVYNGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ KDLIL IG I V GA Y++MEF G + +LSM+ R T+CNM +EAGGKNG++
Sbjct: 169 LNKWVGGKDLILYTIGRIGVDGALYRAMEFCGEAISQLSMDGRFTMCNMAIEAGGKNGII 228
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y+E +T PY SD A + Y FD++K+EP VA PH P+N E
Sbjct: 229 QPDEITRQYVEGRTKRPYTFFTSDPDAQYAEVYEFDVTKIEPQVAFPHLPENARPVSEAG 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
V ID+ IGSCT G+ ED AA+V GKKV +V ++P TQ+++
Sbjct: 289 RVDIDQAVIGSCTNGRMEDLRLAAEVL--KGKKVNKRVRLIIIPGTQEIYRQAMR----- 341
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 ---EGLFDIFLDAGA-VISTPTCGPCLGGHMGILAKGERCIAT 380
>gi|386876621|ref|ZP_10118720.1| putative 3-isopropylmalate dehydratase large subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805583|gb|EIJ65103.1| putative 3-isopropylmalate dehydratase large subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 423
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 228/395 (57%), Gaps = 22/395 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA---KVWDR 125
M + EKI +RAS K ++SP D V+ NVD +M HDV GPG +F K + K+WD
Sbjct: 1 MNIVEKILARASGKSKVSPDDVVFANVDKVMMHDVSGPGVIKVFDKLQKQGISVDKLWDS 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ ++++ + N+ L +F I+ +FK G+CH
Sbjct: 61 TKVWVAEDHFVPSAEKVSAENIVKLSNFTKRYGIEK--------HFKYGMGQYGICHTIS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+V +G DSHT T GA G FA G+G+TD +VL GK+ KVP T F L+G
Sbjct: 113 HEEAMVMPGDVYVGGDSHTNTTGALGAFACGLGHTDVAYVLLNGKIWFKVPETFYFKLNG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++PD+++AKD IL+IIG+I G Y++M+F G+ ++ +S++ R+T+CNM EAG KNG+
Sbjct: 173 KLPDHVMAKDFILKIIGDIGTDGGAYRTMQFGGSGIDEMSVQSRLTMCNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
V D F YL + + + D A + + ++ S+LEP+VAKP SP+N ++ RE
Sbjct: 233 VEPDQKVFDYLTRRGATNLNLIKGDSDAEYEKIFEYEGSELEPVVAKPFSPENISVVREA 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+ YIGSCTG K ED AAAK+ G+KVK+ T ++PA ++
Sbjct: 293 PSVELDKCYIGSCTGAKYEDLEAAAKIL--KGRKVKIRTEILPAAISIYQRAME------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+IF +AG T P+CGAC G A+
Sbjct: 345 --NGLLKIFLDAGV-TVGPPTCGACCGAHMGVLAK 376
>gi|221633665|ref|YP_002522891.1| 3-isopropylmalate dehydratase large subunit [Thermomicrobium roseum
DSM 5159]
gi|221156121|gb|ACM05248.1| 3-isopropylmalate dehydratase, large subunit [Thermomicrobium
roseum DSM 5159]
Length = 422
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 222/385 (57%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI +RA+ + ++ PG+ + V VD++MT+D+ P S FKK E +V+D +K+
Sbjct: 6 MTMAEKILARAAGRRRVEPGEIIEVAVDLVMTNDITAPLSIAEFKKLGVE--RVFDPKKV 63
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D +A I+R+F +EQ YF ++G G+ H+ L +
Sbjct: 64 VFVPDHFVPAKDIKAAEQSKIMREFALEQGAIYF----EIGR-------AGIEHVVLPEH 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG V++G DSHTCT GAF FATG+G+TD + TG ++VP T++FV G +P
Sbjct: 113 GLTRPGMVIIGADSHTCTYGAFNAFATGMGSTDIAAAMATGTTWMRVPQTIKFVYTGTLP 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y MEF G +++L M++R+T+ NM +EAG K G+
Sbjct: 173 PFVTGKDLILYTIGQIGVDGALYACMEFTGPVIDQLPMDDRITMANMAIEAGAKTGIFAC 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T ++L T+ PYEPV SD A + FD+S L PLVA PH P N A E +D+
Sbjct: 233 DDKTREWLAKVTTEPYEPVDSDPDARYAQIIEFDVSNLRPLVALPHLPSNVRPADEVRDL 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+V IGSCT G+ D AA++ +V ++P +Q+V +
Sbjct: 293 PIDQVVIGSCTNGRLSDLRIAAEILKGRQVHPRVRCIVIPGSQEVAKQATR--------E 344
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
IF EAG S +CG CLGG
Sbjct: 345 GLVDIFLEAGAVFSVS-TCGPCLGG 368
>gi|167629600|ref|YP_001680099.1| 3-isopropylmalate dehydratase large subunit [Heliobacterium
modesticaldum Ice1]
gi|226735971|sp|B0TCR2.1|LEUC_HELMI RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|167592340|gb|ABZ84088.1| 3-isopropylmalate dehydratase, large subunit [Heliobacterium
modesticaldum Ice1]
Length = 420
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 232/401 (57%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K + PG+ + +D+++ +DV P S I + E V+D+E++
Sbjct: 3 MTITEKILAAHAGKASVEPGELIQAKLDLVLANDVTAPVS--IKELEKASLDAVFDKERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH++ D ++ I+RDF + +I + YD+ D+G + H L ++
Sbjct: 61 VLVQDHFVPAKDIKSAEQSKIVRDFARKHDITHHYDVGDMG----------IEHCLLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ ++G DSHTCT GA G FATG+G+TD + G+ KVP ++F +G++P
Sbjct: 111 GLVVPGDAVIGADSHTCTYGALGAFATGVGSTDLAAGIALGEAWFKVPEAIKFEYEGKLP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KDLIL IG+I V GA Y+SMEF G+ ++ LSM+ RMT+CNM +EAGGKNG++
Sbjct: 171 EDVTGKDLILHTIGDIGVDGALYQSMEFTGSAIDDLSMDGRMTMCNMAIEAGGKNGIIAP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+E++ + PY+ SD A + ++D+ KLEP+VA PH P+N E V
Sbjct: 231 DKKTIAYVEERATRPYKVYTSDPDAKYARVIKYDVEKLEPVVAFPHLPENTRPVSEAGHV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID+V IGSCT G+ ED AAK+ GKKV V + P TQ ++
Sbjct: 291 EIDQVVIGSCTNGRIEDLRMAAKIL--QGKKVHKNVRCIIFPGTQAIYKQAIK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 -EGLIDIFIDAGAAV-STPTCGPCLGGHMGILAKGERALAT 380
>gi|134298164|ref|YP_001111660.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
reducens MI-1]
gi|134050864|gb|ABO48835.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
reducens MI-1]
Length = 418
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 233/401 (58%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEK+ + A+ K + PG+ + VD+++ +D+ P + F+K G + KVWD+ ++
Sbjct: 1 MTITEKVLAAAAGKESVKPGELINAKVDLVLANDITAPVAIKEFQK-IGLD-KVWDKNRV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ ++RDF Q + ++++ +G + H L ++
Sbjct: 59 ALVPDHFTPNKDIKSAEQAKLVRDFAHTQELANYFEVGRMG----------IEHCLLPEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +++FV +G++
Sbjct: 109 GLVGPGDVIIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESIKFVFNGQLN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KDLIL IG+I V GA YK+MEF G + +LSM+ R T+CNM +EAGGKNG++
Sbjct: 169 KYVGGKDLILHTIGQIGVDGALYKAMEFCGEAISQLSMDGRFTMCNMAIEAGGKNGIIQP 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+E +T PY SD A + Y FD++K+EP VA PH P+N + V
Sbjct: 229 DEITRQYVEGRTKRPYTFYTSDPDAQYSKVYEFDVNKIEPQVAFPHLPENARPVSQAGHV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ IGSCT G+ ED AA++ GKKV +V ++P TQ+++
Sbjct: 289 DIDQAVIGSCTNGRMEDLRLAAEIL--KGKKVHQQVRLIVIPGTQEIYRQAMR------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AG ++P+CG CLGG A+ +A+
Sbjct: 340 -EGLFEIFLDAGA-VVSTPTCGPCLGGHMGILAKGERCIAT 378
>gi|169830564|ref|YP_001716546.1| 3-isopropylmalate dehydratase large subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169637408|gb|ACA58914.1| 3-isopropylmalate dehydratase, large subunit [Candidatus
Desulforudis audaxviator MP104C]
Length = 420
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 231/399 (57%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI +RA+ + +++PG+ + VD ++ +D+ P + F+K E +V+D++++
Sbjct: 3 MTITEKILARAAGRDRVAPGELISARVDAVLGNDITAPLAIREFEKIGVE--RVFDKDRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ +R+F Q + Y++++ +G + H L ++
Sbjct: 61 YLVPDHFTPNKDIKSAEQAKEMREFARRQGLTYYFEVGRMG----------IEHCLLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +++FV +GE+P
Sbjct: 111 GLVGPGDVIIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESVKFVYEGELP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDLIL IG+I V GA Y++MEF G + LSM+ R T+ NM +EAG KNG++
Sbjct: 171 EWVGGKDLILYTIGDIGVEGALYQAMEFTGPAIANLSMDGRFTMANMAIEAGAKNGIIAP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ +T P+E SD A + +D+SK+EP VA PHSPDN E V
Sbjct: 231 DIRTLEYVQGRTIRPFELFASDPDAVYARTITYDVSKIEPQVAFPHSPDNTRPVTEAGRV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ID+V IGSCT G+ ED AA+V V ++P TQ+++ +
Sbjct: 291 EIDQVVIGSCTNGRMEDLRLAARVLERRRVHAGVRLIVIPGTQEIYRQAME--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
IF +AG ++P+CG CLGG AR +A+
Sbjct: 343 GLLAIFIQAGAAV-STPTCGPCLGGHMGVLARGERAVAT 380
>gi|220931928|ref|YP_002508836.1| 3-isopropylmalate dehydratase large subunit [Halothermothrix orenii
H 168]
gi|254809036|sp|B8CX22.1|LEUC_HALOH RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|219993238|gb|ACL69841.1| 3-isopropylmalate dehydratase, large subunit [Halothermothrix
orenii H 168]
Length = 420
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 229/402 (56%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDR 125
MT+ EKI + + + ++ PGD V +D ++ +DV P + KEF + +V+D+
Sbjct: 2 GMTMIEKIIAAHTNRDKVKPGDIVNARIDFVLGNDVTTP----VAVKEFNKIGIDEVFDQ 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
++I I+PDH+ D ++ +R+F ++ I +++I ++G + H L
Sbjct: 58 DRIAIVPDHFTPNKDIKSAEQCKFIREFARDKGIHNYFEIGEMG----------IEHCLL 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G PGE+++G DSHTCT GA G FATG+G+TD + TG KVP T++FV +G
Sbjct: 108 PEKGLALPGEIIIGADSHTCTYGALGAFATGVGSTDMAAAMATGYTWFKVPSTIQFVYNG 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+ ++ KDLIL IG+I V GA Y++MEF G T+E LSM+ RMT+ NM +EAGGK G+
Sbjct: 168 ELKPWVSGKDLILYTIGDIGVDGALYRAMEFTGETIENLSMDNRMTISNMAIEAGGKCGL 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
+ D TFKYLE++ Y P YSD+ A + +D+S +EP VA PH P+N E
Sbjct: 228 IAPDEKTFKYLENRAQRDYTPCYSDDDAEYEKVIEYDVSDIEPQVAFPHLPENTRPISEE 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
D+KID+ IGSCT G+ ED AA + V ++P TQ ++
Sbjct: 288 GDIKIDQAVIGSCTNGRMEDLRIAAGILKEKQVHHDVRCIVIPGTQDIYKQALK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF EAG ++P+CG CLGG AR + +A+
Sbjct: 342 --EGLIEIFIEAGAAV-STPTCGPCLGGHMGILARGEKAIAT 380
>gi|410670824|ref|YP_006923195.1| 3-isopropylmalate dehydratase, large subunit [Methanolobus
psychrophilus R15]
gi|409169952|gb|AFV23827.1| 3-isopropylmalate dehydratase, large subunit [Methanolobus
psychrophilus R15]
Length = 427
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 232/392 (59%), Gaps = 29/392 (7%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKV 122
AMT++EKIFS+AS K ++ G+ V N+D+ MTHD+ GP G + I +++ E KV
Sbjct: 7 QAMTISEKIFSKASGK-KVKAGEFVMANIDMAMTHDITGPLAVEGFYEIMREK--EQKKV 63
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
WD KIVI+ DH + A N +LR F EQ I YD+ Y+GVCH
Sbjct: 64 WDPSKIVILFDHQVPADSLNAAANHIMLRKFAKEQGIMN-YDV-----------YEGVCH 111
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ ++GH RPG++++G+DSHTC GA G F+TGIG+TD V +GK+ +VP T+RF
Sbjct: 112 QVMPEKGHVRPGDLVVGSDSHTCAYGALGAFSTGIGSTDMAAVFASGKLWFRVPETIRFE 171
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
++G++P ++ +KD+IL +IG++ GA YK+ E+ G+TV+ + M ERMT+ NM +E GGK
Sbjct: 172 VNGKLPKHVYSKDVILHLIGDVGAEGARYKAAEYAGSTVQDMPMSERMTVSNMAIEMGGK 231
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDNRAL 361
G++ AD T KYL+++ Y + +SE R +D+SKLEP VA PH+ DN
Sbjct: 232 AGIIEADKVTEKYLQERIPDFKLDTYWKSDKNAVSEIREYDVSKLEPQVACPHNVDNVKP 291
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
E + +K+D+V++GSCT G+ ED AK+ V ++PA++ +M V
Sbjct: 292 VTEVEGIKVDQVFVGSCTNGRFEDIEIVAKMMGDESVAKGVRLLIIPASRTEYMKVLR-- 349
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG SP CG C+GG
Sbjct: 350 ------AGYIEQFMEAGA-MVESPCCGPCMGG 374
>gi|15606262|ref|NP_213641.1| 3-isopropylmalate dehydratase large subunit [Aquifex aeolicus VF5]
gi|6225609|sp|O67078.1|LEUC_AQUAE RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|2983447|gb|AAC07028.1| large subunit of isopropylmalate isomerase [Aquifex aeolicus VF5]
Length = 432
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 233/390 (59%), Gaps = 27/390 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K ++ PG+ + +D+ M +DV P + I +K +G + KV+D E+I
Sbjct: 3 MTITEKILAEHAGKKEVHPGELITAKIDLAMANDVTAPLAIKILEK-YGID-KVFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ H++ D ++ I+R+F + IK+F++ + +G+ H L ++
Sbjct: 61 ALVLSHFVPAKDIKSAEQAKIVREFVKKHGIKWFFE-----------EGEGIEHAILPEQ 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + + TG+V L+VP +++F+ G++
Sbjct: 110 GLVVPGDLVVGADSHTCTYGALGAFATGVGSTDIAYAMATGEVWLRVPESMKFIFYGKLK 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDLIL IG+I V GA Y++MEF G T+ LSME+R T+ NM +EAGGK+G++
Sbjct: 170 PWVMGKDLILYTIGQIGVDGALYRAMEFDGETIRNLSMEQRFTIANMAIEAGGKSGIISP 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ + P++ SD A + S Y +D S++EPLVA P+ P N E +
Sbjct: 230 DEKTIEYVKQRAKRPWKVYQSDPDAEYHSVYEWDASQIEPLVAWPYLPSNVHPVSESTHI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
ID+ +IGSCT G+ ED AAKVF L GKKV V ++PA++ ++
Sbjct: 290 TIDQAFIGSCTNGRIEDLRVAAKVFEAALKQGKKVHPYVRCIVIPASKAIYKQALK---- 345
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAGC S +CG CLGG
Sbjct: 346 ----EGLIDIFMEAGCVVSTS-TCGPCLGG 370
>gi|300868805|ref|ZP_07113412.1| 3-isopropylmalate dehydratase, LeuC subunit [Oscillatoria sp. PCC
6506]
gi|300333156|emb|CBN58604.1| 3-isopropylmalate dehydratase, LeuC subunit [Oscillatoria sp. PCC
6506]
Length = 581
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 222/397 (55%), Gaps = 21/397 (5%)
Query: 59 PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE 118
P + SV+ AMT+ EK+ +RAS + PG+ V+V VD+ M+HD +F FGE
Sbjct: 136 PKSATSVR-AMTMAEKLLARASGNDYVQPGETVFVKVDLAMSHDAVAAPVAKVFYVHFGE 194
Query: 119 NAKVWDREKIVIIPDHYIFTSDERANRNVDILR----DFCMEQNIKYFYDIKDLGNFKAN 174
+AK+WD ++V++ DH+I +D R + +L F Q + D+ G
Sbjct: 195 DAKLWDVNRVVLVADHFIQVNDVRVDPKATLLYSEMVQFARAQGC-HLLDVVSPG----- 248
Query: 175 PDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLK 234
+ G+CH+ L ++G RPG ++ GTDSHTCT GAFG F+TG+G TD + G + ++
Sbjct: 249 -EAAGICHVLLPEKGFIRPGTIVAGTDSHTCTYGAFGCFSTGVGTTDMANIFAMGDMWVR 307
Query: 235 VPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCN 294
VPPTL F L+G +P+Y+ AKD++L I+G+I GA K MEF G+ ++R+ MEERMTL N
Sbjct: 308 VPPTLLFQLEGTLPEYITAKDIMLFILGKIGCDGAAAKVMEFRGSIIDRMPMEERMTLSN 367
Query: 295 MVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPH 354
M +E G G++ D TT +YL+ +E V SD A + Y FD++ LEP VA P
Sbjct: 368 MAIECGAMCGLIAPDATTRQYLQSCGQDLFEEVVSDPDADYEEIYHFDLNDLEPQVACPP 427
Query: 355 SPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW 414
PD E +V I + +IGSCTGGK D AA+V V F+VPA+ +V
Sbjct: 428 KPDQVVAISELGEVPITKAFIGSCTGGKLSDLAQAAEVLKGRHVAPGVSLFIVPASLEVR 487
Query: 415 MDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
L QIFE AG T CGAC+
Sbjct: 488 QKAENLGY--------MQIFEAAGA-TVLKSGCGACI 515
>gi|404476135|ref|YP_006707566.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
B2904]
gi|431807114|ref|YP_007234012.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
P43/6/78]
gi|404437624|gb|AFR70818.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
B2904]
gi|430780473|gb|AGA65757.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
P43/6/78]
Length = 415
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K G N KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVRTDLVLGNDITSPVAINEFEKH-GFN-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I ++YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKHDITHYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TGKV KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGKVWFKVPAAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACISNMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T ++L+D Y +D+ A + EY D+S +EP VA PH P+N A+E KD+
Sbjct: 229 DDKTIEFLKDIVKRDYTIFKADDDAVYEKEYDIDLSAIEPTVACPHLPENTKEAKELKDI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKKV V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMAIAANIL--KGKKVAKNVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|300869823|ref|YP_003784694.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
95/1000]
gi|300687522|gb|ADK30193.1| 3-isopropylmalate dehydratase, large subunit [Brachyspira
pilosicoli 95/1000]
Length = 415
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K G N KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVRTDLVLGNDITSPVAINEFEKH-GFN-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I ++YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKHDITHYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TGKV KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGKVWFKVPAAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGDGVSSLTMDDRACISNMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T ++L+D Y +D+ A + EY D+S +EP VA PH P+N A+E KD+
Sbjct: 229 DDKTIEFLKDIVKRDYTIFKADDDAVYEKEYDIDLSAIEPTVACPHLPENTKEAKELKDI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKKV V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMAIAANIL--KGKKVAKNVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|298714290|emb|CBJ27406.1| putative homoaconitate hydratase, c-terminal part [Ectocarpus
siliculosus]
Length = 283
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 167/214 (78%), Gaps = 7/214 (3%)
Query: 254 KDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTF 313
+D+ILQIIG+I VAGATY+SMEF G+ + +LSMEER TLCNM +EAGGKNGV+PAD T
Sbjct: 2 QDIILQIIGDIGVAGATYRSMEFAGSALGQLSMEERQTLCNMAIEAGGKNGVIPADDVTT 61
Query: 314 KYLEDKTS--LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKID 371
Y+ + + PYE +D A + S+ R+D+S LEP+VAKPHSPDN+ALA++C+ KID
Sbjct: 62 AYVNARNAGNKPYEIFKADPNAKYFSKKRYDMSNLEPVVAKPHSPDNKALAKDCRGTKID 121
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCS 431
RVYIGSCTGGKTEDF AAA++ +KV+VPTFLVPATQKV+ D+ TL + GG+T +
Sbjct: 122 RVYIGSCTGGKTEDFAAAARIL--QNQKVRVPTFLVPATQKVYNDIQTLKI---GGRTLA 176
Query: 432 QIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
IF EAGC PASPSC ACLGGP DTYARMN+P
Sbjct: 177 SIFREAGCLEPASPSCAACLGGPADTYARMNQPF 210
>gi|435850891|ref|YP_007312477.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661521|gb|AGB48947.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 413
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 225/392 (57%), Gaps = 27/392 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFSRAS + D V VD M HD + FK E G + VWD +IV
Sbjct: 3 TISEKIFSRASGQ-DAKADDFVMAKVDYAMAHDGTSILAVRAFK-EMGVRS-VWDPSRIV 59
Query: 130 IIPDHYIFTSDER-ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I DH + ++E A+ DI R + EQ I++FYD+ GN G+CH L ++
Sbjct: 60 IPFDHLVPANNESTASLQFDI-RKWISEQGIEHFYDV---GN--------GICHQVLPEQ 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSH+CT GAFG F TG+G TD + G++ KVP T++ G +
Sbjct: 108 GFALPGKLIVGADSHSCTYGAFGAFGTGVGATDMAEIFAAGELWFKVPQTIKVTCQGSLG 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KDL L I+G++ GATYK+MEF G T+ LSM RMTLCNM +E G K G+VPA
Sbjct: 168 QYITPKDLTLHIVGKVGADGATYKAMEFYGQTISELSMSGRMTLCNMAIEMGAKAGIVPA 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TTF YL + YEPVY+DE AS++ E+ ++S LEP VA PH DN E
Sbjct: 228 DKTTFDYLRGRAVEGYEPVYADEDASYVKEFIINVSDLEPQVALPHQVDNVVGISEVPQT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V+IG+CT G+ ED AA+V +KV V T ++PA+++V + S
Sbjct: 288 KVDQVFIGTCTNGRLEDLDLAAQVL--KDEKVAVRTIIIPASREVMKEA-------SMNG 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
T + I EAG T P CG CLGG A+
Sbjct: 339 TLA-ILLEAGA-TIGMPGCGPCLGGHMGVIAK 368
>gi|414153628|ref|ZP_11409951.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455026|emb|CCO07855.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 420
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + A+ K + PG+ + VD+++ +D+ P + F+K G +VWD+E++
Sbjct: 3 MTITEKILAAAAGKDSVKPGELINAKVDLVLANDITAPVAIKEFQK-IGLT-RVWDKERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ ++RDF Q + ++++ +G + H L ++
Sbjct: 61 ALVPDHFTPNKDIKSAEQAKLVRDFAHSQELTNYFEVGRMG----------IEHCLLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + G+ KVP +L+FV G +
Sbjct: 111 GLVGPGDVVIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFKVPESLKFVYHGSLN 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G + RLSM+ R T+CNM +EAGGKNG++
Sbjct: 171 KWVGGKDLILYTIGQIGVDGALYRAMEFCGEAIRRLSMDGRFTMCNMAIEAGGKNGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+E + PY SD A + + Y FD SK+EP VA PH P+N + V
Sbjct: 231 DEITRQYVEGRAKRPYTFYTSDPDAVYAAVYEFDASKIEPQVAFPHLPENARPVSQAGQV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
+I + IGSCT G+ ED AA+V GKKV +V ++P TQ+++
Sbjct: 291 EIHQAVIGSCTNGRMEDLRLAAQVL--QGKKVNKRVRLIIIPGTQEIYRQAMR------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 -EGLFEIFLDAGA-VVSTPTCGPCLGGHMGILAKGERCIAT 380
>gi|312143757|ref|YP_003995203.1| 3-isopropylmalate dehydratase large subunit [Halanaerobium
hydrogeniformans]
gi|311904408|gb|ADQ14849.1| 3-isopropylmalate dehydratase, large subunit [Halanaerobium
hydrogeniformans]
Length = 421
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 221/386 (57%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI + +E +L PG V VDI++ +D+ P + F K E V+D+++
Sbjct: 2 GMTMIEKIIAAHTEHDELKPGQIVNAEVDIVLGNDITTPVAIEEFNKIGVET--VFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VI+PDH+ + D +A V +LR+F + + F++I +G + H+ L +
Sbjct: 60 VVIVPDHFAPSKDIQAAEQVKMLREFARKHELTNFFEIGQMG----------IEHVLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++G DSHTCT GA G TG+G+TD + TGK KVPPT++FV GE+
Sbjct: 110 KGLALPGEIIVGADSHTCTYGALGALGTGVGSTDMAAAMATGKTWFKVPPTIKFVYTGEL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDLIL IG+I V GA YK+MEF G + LSM+ RMT+ NM +EAGGK G++
Sbjct: 170 QPWVSGKDLILYTIGKIGVDGALYKAMEFTGEAISNLSMDGRMTMSNMAIEAGGKAGLIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T +YL+D+ Y SDE A + D+SK+EP VA P PDN E +
Sbjct: 230 ADDKTIEYLKDRAVRDYTIYKSDEDAEYEEVIEIDVSKIEPQVAFPSLPDNTRGVSEAGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKI + IGSCT G+ ED AAAK+ + V + P TQ D+Y V
Sbjct: 290 VKIHQSVIGSCTNGRIEDLRAAAKILEGNKIHPDVRCLIFPGTQ----DIYKQAV----N 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG ++P+CG CLGG
Sbjct: 342 EGLVEIFIDAGA-AFSTPTCGPCLGG 366
>gi|338812648|ref|ZP_08624818.1| 3-isopropylmalate dehydratase large subunit [Acetonema longum DSM
6540]
gi|337275432|gb|EGO63899.1| 3-isopropylmalate dehydratase large subunit [Acetonema longum DSM
6540]
Length = 420
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 229/387 (59%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKIF+R + ++ PG + VD+++ +D+ GP S FKK V+D+EKI
Sbjct: 3 MTMTEKIFARKAGLSRVEPGQLIQCPVDLVLANDITGPPSIQEFKKI---GRPVFDKEKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+I D ++ ++DF I +++++ +G + H+ L Q
Sbjct: 60 VLVPDHFIPNKDIKSAEQAKAIKDFARAHQITHYFEVGRMG----------IEHVLLPQV 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GA G FATG+G+TDAG + TG KVP +++ L G++
Sbjct: 110 GLVAPGEVIIGADSHTCTYGALGAFATGVGSTDAGAAMATGTAWFKVPASIKVALSGKLN 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL +IG I V GA Y+S+EF G + L+M +R+T+ NM +E G KNG+ P
Sbjct: 170 KWVTGKDVILTLIGMIGVDGARYQSLEFAGPGLSSLTMADRLTIANMAIEGGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D YL+ + S PYE +++D A + D+S+LEP+VA PH P+N AR+ DV
Sbjct: 230 DDIALAYLKGRVSRPYEMMHADPDARYARTVTIDLSQLEPVVALPHLPENVKPARQVTDV 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ +D AA + GKKV ++ ++P +Q+V+++
Sbjct: 290 PIDQVVIGSCTNGRLDDLAQAAAIL--QGKKVHPRLRAIVIPGSQEVYLEAME------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
K + F EAG ++P+CG CLGG
Sbjct: 341 -KGYIRTFIEAGA-VVSTPTCGPCLGG 365
>gi|296127241|ref|YP_003634493.1| 3-isopropylmalate dehydratase large subunit [Brachyspira murdochii
DSM 12563]
gi|296019057|gb|ADG72294.1| 3-isopropylmalate dehydratase, large subunit [Brachyspira murdochii
DSM 12563]
Length = 415
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K +G + KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVKTDLVLGNDITSPVAINEFEK-YGFD-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I +YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TG+V KVP ++F L G++
Sbjct: 109 GLVSPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGQVWFKVPSAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACIANMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+D Y +D+ A + EY D+S +EP VA PH P+N A+E KD+
Sbjct: 229 DNQTIEYLKDIVKRDYTIYKADDDAVYEKEYDIDLSSIEPTVACPHLPENTKDAKELKDI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKK+ V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMATAANIL--KGKKIAKNVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|148643360|ref|YP_001273873.1| 3-isopropylmalate dehydratase large subunit [Methanobrevibacter
smithii ATCC 35061]
gi|148552377|gb|ABQ87505.1| 3-isopropylmalate dehydratase, large subunit, LeuC
[Methanobrevibacter smithii ATCC 35061]
Length = 415
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 222/386 (57%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI ++A+ K ++ GD V N+D+ MTHD+ GP S F+K G KVWD KIV
Sbjct: 4 TMSEKILAKAAGKDEVEAGDIVIANIDVAMTHDLTGPLSVQSFEK-IGAT-KVWDPSKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + N I+R F EQ I+ FYD+ GVCH L + G
Sbjct: 62 IPFDHQVPADSIDSANNHIIMRKFVKEQKIENFYDVN-----------AGVCHQILPELG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PGEV++G DSHTCT GA G F+TGIG+TD V G + KVP T RF + GE+ D
Sbjct: 111 HVVPGEVIVGADSHTCTHGALGAFSTGIGSTDMAMVFAEGNLWFKVPETNRFEITGELKD 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL IIG++ V G+TYK+ EF G TV +S+ +RM L NM +E GGK G+V D
Sbjct: 171 NVYAKDVILNIIGQVGVDGSTYKACEFAGETVSNMSISDRMVLTNMAIEMGGKTGLVEPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+E +++ Y+ +D A L+ D+S+LEP VA PH DN E D +
Sbjct: 231 KKTIDYVESRSNKAYKVFKTDLDAPSLNIIDIDVSELEPQVACPHHVDNVKAVSEV-DQE 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
ID+V++GSCT G+ D AAK+ GKKV T ++PA+++V+
Sbjct: 290 IDQVFLGSCTNGRISDLRDAAKIL--KGKKVAKGTRMLVIPASKEVYSKALD-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P CG CLGG
Sbjct: 340 EGLLKIFVDAGALVSA-PCCGPCLGG 364
>gi|85860416|ref|YP_462618.1| 3-isopropylmalate dehydratase large subunit [Syntrophus
aciditrophicus SB]
gi|123517414|sp|Q2LWJ2.1|LEUC_SYNAS RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|85723507|gb|ABC78450.1| 3-isopropylmalate dehydratase large subunit [Syntrophus
aciditrophicus SB]
Length = 420
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 226/399 (56%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI R ++ ++ PG + VDI + +DV P + F+K G+ KV+DR+K+
Sbjct: 3 MTITEKILCRHTDLDEVRPGMLINAKVDIALGNDVTAPLAIDEFRKAGGK--KVFDRDKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+IPDH+ D + I+RDF EQ I ++Y++ ++G V H L ++
Sbjct: 61 VLIPDHFTPNKDINSAAQCKIMRDFAREQEITHYYEVGEVG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG+V KVP ++RFVL G +
Sbjct: 111 GIVLPGDLVIGADSHTCTYGALGAFATGVGSTDLAAAMLTGEVWFKVPESIRFVLSGTLN 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IIG+I V GA YK+MEF G T+ L+M +R T+ NM +EAGGKNG+
Sbjct: 171 PWVSGKDLILYIIGKIGVDGALYKAMEFTGDTIASLTMADRFTIANMAIEAGGKNGIFTP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++ + PY SD A++ D++++EP VA PH P N E V
Sbjct: 231 DEITEAYVKPRAKRPYTFYASDPDAAYAQVIEIDVNRIEPQVAFPHLPSNTKGISEVGQV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+V IGSCT G+ ED AAA V +V ++PATQ+++ +
Sbjct: 291 PLDQVVIGSCTNGRIEDLRAAAAVLKGRKADPRVRLIVIPATQEIYRMAMK--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
IF +A ++P+CG CLGG A +A+
Sbjct: 343 GLFDIFLDANAAI-STPTCGPCLGGHMGILAAGERALAT 380
>gi|434381939|ref|YP_006703722.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
WesB]
gi|404430588|emb|CCG56634.1| 3-isopropylmalate dehydratase large subunit [Brachyspira pilosicoli
WesB]
Length = 415
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 225/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K G N KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVRTDLVLGNDITSPVAINEFEKH-GFN-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I ++YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKHDITHYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TGKV KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGKVWFKVPAAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACISNMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T ++L+D Y +D+ A + EY D+S +EP VA PH P+N A+E KD+
Sbjct: 229 DDKTIEFLKDIVKRDYTIFKADDDAVYEKEYDIDLSTIEPTVACPHLPENTKEAKELKDI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKKV V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMAIAANIL--KGKKVAKNVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AGC ++P+CG CLGG
Sbjct: 343 ----MDILIDAGC-AVSTPTCGPCLGG 364
>gi|336477828|ref|YP_004616969.1| 3-isopropylmalate dehydratase [Methanosalsum zhilinae DSM 4017]
gi|335931209|gb|AEH61750.1| 3-isopropylmalate dehydratase [Methanosalsum zhilinae DSM 4017]
Length = 428
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 230/392 (58%), Gaps = 30/392 (7%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKV 122
N+MT++EKIFS+A+ K + GD V+ N+D MTHD+ GP G + I K + E+ KV
Sbjct: 7 NSMTISEKIFSKAAGK-DVKAGDFVFANIDRAMTHDITGPLALKGFYEIMKDK--EDKKV 63
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
WD KIVII DH + A N +LR F EQNI YD+ Y+G+CH
Sbjct: 64 WDPSKIVIIFDHQVPADSLYAASNHIMLRKFAKEQNI-LNYDV-----------YEGICH 111
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ ++GH +PG++++G+DSHTC+ GA G F+TGIG+TD V +GK+ KVP T+RF
Sbjct: 112 QVMPEKGHVQPGDLVVGSDSHTCSYGALGAFSTGIGSTDMAAVFASGKLWFKVPETIRFE 171
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
++G +PD++ +KD+IL +IG+I + GATY + E+ G+ V LSM ERMT+CNM +E G K
Sbjct: 172 VEGNLPDHVYSKDIILHLIGDIGIEGATYMASEYAGSAVRNLSMSERMTMCNMAIEMGAK 231
Query: 303 NGVVPADGTTFKYLEDKTS-LPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRA 360
G++ D T YL+++ S +P + SD A + +D+S LEP +A PH+ DN
Sbjct: 232 TGIIEPDEVTENYLKERISGYQLDPHWISDTDAKYSQVRHYDVSDLEPQIACPHNVDNVK 291
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTL 420
E + K+D+++IGSCT G+ ED AAK+ V ++PA++ ++
Sbjct: 292 PVSEVEGTKLDQIFIGSCTNGRFEDIEIAAKIIGDEPVAKDVRLLVIPASRTEYLKALK- 350
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
Q+ EAG S CG C+G
Sbjct: 351 ------AGYIEQLI-EAGA-IVESACCGPCMG 374
>gi|288931087|ref|YP_003435147.1| homoaconitate hydratase family protein [Ferroglobus placidus DSM
10642]
gi|288893335|gb|ADC64872.1| homoaconitate hydratase family protein [Ferroglobus placidus DSM
10642]
Length = 419
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/389 (41%), Positives = 223/389 (57%), Gaps = 31/389 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+EKIFS S K + GD V +D+ M HD+ GP + F++ GE AKVWD +KIV
Sbjct: 4 TLSEKIFSEKSGK-DVKAGDFVLAEIDVAMIHDITGPLAIKAFREIAGEKAKVWDPKKIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH A N +LR F EQ I YD+ + G+ H + ++G
Sbjct: 63 IAFDHQAPADSVAAAENHKMLRKFAKEQGI-LLYDVGE-----------GIAHQIMVEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG + +G DSHTC GA G FATGIG+TD G V GK+ KVP T++F ++G++P
Sbjct: 111 HVLPGMLAVGADSHTCMYGALGAFATGIGSTDMGAVFALGKLWFKVPETIKFEINGKLPR 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+IIG + GA YK+ EFVG+T+E++ M ER+T+ NM +E GGK G++P D
Sbjct: 171 RVYSKDVILKIIGTVGANGANYKACEFVGSTIEKMEMSERLTMTNMAIEMGGKTGIIPPD 230
Query: 310 GTTFKYLED---KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YL+ +P E +YSDE A + E D+S LEP VA PHS DN E +
Sbjct: 231 KVTEDYLKSIGVDYEIP-EWLYSDEDA-YWKEVSLDVSNLEPQVACPHSVDNVKPVSEVE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
VKID+V+IGSCT G+ ED AA++ G+KV V ++PA++ +
Sbjct: 289 GVKIDQVFIGSCTNGRYEDLKVAAEIL--KGEKVAKGVRLIVIPASRSHYKRALK----- 341
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG PSCG C+GG
Sbjct: 342 ---EGLIDIFVEAGA-IVEFPSCGPCMGG 366
>gi|156937722|ref|YP_001435518.1| 3-isopropylmalate dehydratase large subunit [Ignicoccus hospitalis
KIN4/I]
gi|156566706|gb|ABU82111.1| 3-isopropylmalate dehydratase, large subunit [Ignicoccus hospitalis
KIN4/I]
Length = 419
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 225/386 (58%), Gaps = 26/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI RAS K +SPG+ V NVD+ M HD+ GP + ++ GE +VWD +K+
Sbjct: 4 TMAEKILGRASGK-DVSPGEIVEANVDLAMVHDLTGPHVVEVVEEIAGE-VRVWDPDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DH++ RA I+R + IK F+D+ G+CH L +E
Sbjct: 62 IIFDHHVPADKIRAAELQAIMRKVARKLGIKKFHDV----------GRGGICHQVLVEER 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ RPG +++G DSHT T+GA G FATGIG +D V TGK+ KVP +++ + GE+P
Sbjct: 112 YARPGMLIVGADSHTVTSGAVGAFATGIGASDMAMVWLTGKLWFKVPESIKVNVTGELPK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL IIG ++V GATYK++E+ G T++R+++ +RMTL NM VE G K G+VPAD
Sbjct: 172 GVYAKDVILHIIGTVTVDGATYKAVEYHGDTIKRMNIADRMTLANMSVEMGAKAGMVPAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T K+ E+ + +P D A + + FD+SKLEP VA PHS DN E +
Sbjct: 232 EVTVKFFEE-AGISVKPFGPDPGAQYEDVWEFDVSKLEPQVAVPHSVDNVVAVGEVEGTP 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ EDF+ AAK+ G+KV V +PA+ K +M +
Sbjct: 291 IDQAFIGSCTNGRYEDFVEAAKIL--KGRKVAPGVRCIAIPASLKQYMRLLK-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ I EAGC A +CG CLGG
Sbjct: 341 EGIIDILTEAGCFV-AHSTCGPCLGG 365
>gi|78043190|ref|YP_359380.1| 3-isopropylmalate dehydratase large subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995305|gb|ABB14204.1| 3-isopropylmalate dehydratase, large subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 421
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 233/402 (57%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K + PG+ + VD ++ +D+ GP + FKK G ++ V+DR+++
Sbjct: 3 MTMTEKILAYHAGKELVEPGELISCKVDAVLANDITGPVAISEFKK-IGVDS-VFDRDRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ ILRDF EQN+ Y++++ +G + H+ L +E
Sbjct: 61 YLVPDHFTPNKDIKSAEQAKILRDFAKEQNLTYYFEVGKMG----------IEHVLLPEE 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE-M 247
G PGEV++G DSHTCT G G FATG+G+TD + G+ KVP +++F L GE +
Sbjct: 111 GLVLPGEVIIGADSHTCTYGGLGAFATGVGSTDLAAAMALGETWFKVPESIKFYLYGEKL 170
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ AKD+IL IIG+I V GA YK+MEF G+ ++ +S+E R+T+ NM +EAG KNG+ P
Sbjct: 171 LPYVSAKDIILFIIGQIGVDGALYKAMEFAGSALKLISVEGRLTMANMAIEAGAKNGIFP 230
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + ++ SD A + + Y ++ ++EP VA PH P+N +E
Sbjct: 231 VDELTLEYVKGRAKREFKVFASDPDARYEAVYEINVEEIEPQVALPHLPENAVPVKEVSG 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
ID+V IGSCT G+ ED AA + GKKVK V ++P +Q V+
Sbjct: 291 KDIDQVVIGSCTNGRIEDLRVAAAIL--KGKKVKDYVRCIIIPGSQSVYRQALK------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF EAG ++P+CG CLGG A+ +A+
Sbjct: 343 --EGLIDIFLEAGAAV-STPTCGPCLGGHMGILAKGERAVAT 381
>gi|222445603|ref|ZP_03608118.1| hypothetical protein METSMIALI_01243 [Methanobrevibacter smithii
DSM 2375]
gi|222435168|gb|EEE42333.1| homoaconitate hydratase family protein [Methanobrevibacter smithii
DSM 2375]
Length = 414
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 222/386 (57%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI +RA+ K ++ GD V N+D+ MTHD+ GP S F+K G KVWD KIV
Sbjct: 4 TMSEKILARAAGKDEVEAGDIVIANIDVAMTHDLTGPLSVQSFEK-IGAT-KVWDPSKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + N I+R F EQ I+ FYD+ GVCH L + G
Sbjct: 62 IPFDHQVPADSIDSANNHIIMRKFVKEQKIENFYDVN-----------AGVCHQILPELG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PGEV++G DSHTCT GA G F+TGIG+TD V G + KVP T RF + G++ D
Sbjct: 111 HVVPGEVIVGADSHTCTHGALGAFSTGIGSTDMAMVFAEGNLWFKVPETNRFEITGKLKD 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL IIG++ G+TYK+ EF G TV +S+ +RM L NM +E GGK G+V D
Sbjct: 171 NVYAKDVILNIIGQMGADGSTYKACEFAGETVSDMSISDRMVLTNMAIEMGGKTGLVEVD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+E +++ PY+ +D A L+ D+S LEP VA PH+ DN E D +
Sbjct: 231 KKTIDYVESRSNKPYKVFKTDLDAPSLNIIDIDVSDLEPQVACPHNVDNVKPVSEV-DEE 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
ID+V++GSCT G+ D AAK+ GKK+ T ++PA+++V+
Sbjct: 290 IDQVFLGSCTNGRLSDLRDAAKIL--KGKKIAKGTRMLVIPASKEVYSKALD-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P CG CLGG
Sbjct: 340 EGLLKIFVDAGALVSA-PCCGPCLGG 364
>gi|357040899|ref|ZP_09102682.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355355993|gb|EHG03791.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 421
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 223/400 (55%), Gaps = 21/400 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+TEKI + + ++ PG + V VD+ + +D+ P + F++ E VWDRE+
Sbjct: 3 AMTITEKILAAHAGMDRVEPGQLINVQVDLALGNDITAPVAIREFERIGVET--VWDRER 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDH++ D ++ V LR+F + + +FY++ +G V H L +
Sbjct: 61 VVLVPDHFVPNKDIKSAEQVKGLREFARKHQLPHFYEVGRMG----------VEHCLLPE 110
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT G G F+TG+G+TD + G+ LKVP +++FV GE+
Sbjct: 111 QGLVGPGDLVIGADSHTCTYGGLGAFSTGVGSTDLAAAMALGETWLKVPESIKFVYYGEL 170
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ KDLIL IG+I V GA Y +MEF G +E L +E R+T+ NM VEAG KNG+V
Sbjct: 171 PRWVGGKDLILYTIGQIGVDGALYMAMEFTGPAIEGLGIEGRLTMANMAVEAGAKNGIVA 230
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+E + PY SD A + D+SKLEP +A PH P+N E D
Sbjct: 231 PDEITRRYVEGRAKRPYTFYQSDPDARYAQVIEIDVSKLEPQIAFPHLPENTRPVSEAAD 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V ID+V IGSCT G+ D AA+V + ++P TQ ++M
Sbjct: 291 VTIDQVVIGSCTNGRLSDLQLAAEVLKGHRVSDNLRLLVIPGTQDIYMQALR-------- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F EAG ++P+CG CLGG A+ +A+
Sbjct: 343 EGLVEQFIEAGAAV-STPTCGPCLGGHMGILAKGERALAT 381
>gi|325959795|ref|YP_004291261.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
AL-21]
gi|325331227|gb|ADZ10289.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
AL-21]
Length = 414
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 226/387 (58%), Gaps = 27/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI +RA+ K ++ PG+ + V+VD+ M HD P + FKK KVWD EKI
Sbjct: 1 MNITEKILARAAGKEEVHPGEIIEVDVDLAMAHDGTSPPTINNFKKI---QDKVWDPEKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH + + + + R+F +Q IK + + +G+CH L +
Sbjct: 58 VIICDHTVPPNTIGSAEFHKVSREFARDQGIKNYLN-----------HGEGICHQVLPEY 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PGEV++G DSHTCT GAFG FATG+G TD F+ TG+ +VP + +DG++
Sbjct: 107 GFVKPGEVVVGADSHTCTHGAFGAFATGVGATDMAFIFATGQTWFRVPEAYKITVDGKLG 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ AKD+IL +IGEI GATYKS+EF G T+E + + RMT+CNM +E+G KNG++
Sbjct: 167 NFVSAKDVILNVIGEIGTYGATYKSLEFCGNTIENMDVAGRMTICNMAIESGAKNGIMEP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ T +YL+D+ ++ V SD ++ EY FD+ +EP VA PH+ DN +
Sbjct: 227 NKATLQYLKDRNVKGFDVVTSDPDYTYEKEYFFDVDDMEPQVACPHNVDNVKPLSKVTGK 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
I++ +IGSCT G+ ED +AAA+V GK+V V ++PA+ +++ SG
Sbjct: 287 TINQAFIGSCTNGRMEDLVAAAEVL--EGKRVHPDVRLLIIPASAEIYRKAIN-----SG 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF ++G +P CG CLGG
Sbjct: 340 ---LVDIFMDSGA-IICNPGCGPCLGG 362
>gi|261349845|ref|ZP_05975262.1| homoaconitate hydratase [Methanobrevibacter smithii DSM 2374]
gi|288860629|gb|EFC92927.1| homoaconitate hydratase [Methanobrevibacter smithii DSM 2374]
Length = 415
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 221/386 (57%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI ++A+ K ++ GD V N+D+ MTHD+ GP S F+K G KVWD KIV
Sbjct: 4 TMSEKILAKAAGKDEVEAGDIVIANIDVAMTHDLTGPLSVQSFEK-IGAT-KVWDPSKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + N I+R F EQ I+ FYD+ GVCH L + G
Sbjct: 62 IPFDHQVPADSIDSANNHIIMRKFVKEQKIENFYDVN-----------AGVCHQILPELG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PGEV++G DSHTCT GA G F+TGIG+TD V G + KVP T RF + GE+ +
Sbjct: 111 HVVPGEVIVGADSHTCTHGALGAFSTGIGSTDMAMVFAEGNLWFKVPETNRFEITGELKN 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL IIG++ V G+TYK+ EF G TV +S+ +RM L NM +E GGK G+V D
Sbjct: 171 NVYAKDVILNIIGQVGVDGSTYKACEFAGETVSNMSISDRMVLTNMAIEMGGKTGLVEPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+E +++ Y+ +D A L+ D+S LEP VA PH DN E D +
Sbjct: 231 KKTIDYVESRSNKAYKVFKTDLDAPSLNIIDIDVSDLEPQVACPHHVDNVKAVSEV-DQE 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
ID+V++GSCT G+ D AAK+ GKKV T ++PA+++V+
Sbjct: 290 IDQVFLGSCTNGRISDLRDAAKIL--KGKKVAKGTRMLVIPASKEVYSKALD-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P CG CLGG
Sbjct: 340 EGLLKIFVDAGALVSA-PCCGPCLGG 364
>gi|254423580|ref|ZP_05037298.1| 3-isopropylmalate dehydratase, large subunit subfamily
[Synechococcus sp. PCC 7335]
gi|196191069|gb|EDX86033.1| 3-isopropylmalate dehydratase, large subunit subfamily
[Synechococcus sp. PCC 7335]
Length = 567
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 221/387 (57%), Gaps = 20/387 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EK+ ++AS + PG+ V+ VD+ M+HD +F+++FG NA VWD KI
Sbjct: 143 MTVAEKLLAQASGNSYVRPGEVVFAKVDLAMSHDAIAGPVGALFQQQFGPNATVWDPGKI 202
Query: 129 VIIPDHYIFTSDERANRNVDILR----DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
V++ DH+I +D R +R L DF +Q + +D+ G + G+CH+
Sbjct: 203 VLVADHFIQVNDIRQDRGAISLHQQMVDFAKQQGC-HLFDVVSPG------EAAGICHVL 255
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++G RPG ++ GTDSH+CT GAFG F+TG+G TD + G + ++VP TLR L
Sbjct: 256 LPEQGFVRPGMMIAGTDSHSCTYGAFGSFSTGVGTTDMANIFAMGDLWIRVPATLRIELS 315
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+ + AKD++L I+G+I GAT +EF G+ VE+L M+ERMTL NMV+E G G
Sbjct: 316 GKLPELVSAKDIMLFILGQIGCHGATGTVVEFAGSVVEQLPMDERMTLANMVIECGAMCG 375
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++P D TT +Y++ T+ P+ V +D A + YRFD+S+L P VA P +PD E
Sbjct: 376 LMPVDQTTREYVKAHTNQPFTEVTADLDAQYEQSYRFDLSQLTPQVAAPPTPDRVVPVHE 435
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
V I R +IGSCTGGK D AAA V F+VPA+Q V ++
Sbjct: 436 LDGVAITRAFIGSCTGGKLHDLAAAAAAIKGQRVNPAVSLFVVPASQAVKEQAESMGYLS 495
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACL 451
+ E+AG T CGAC+
Sbjct: 496 T--------LEQAGA-TVLKSGCGACI 513
>gi|294496522|ref|YP_003543015.1| 3-isopropylmalate dehydratase, large subunit [Methanohalophilus
mahii DSM 5219]
gi|292667521|gb|ADE37370.1| 3-isopropylmalate dehydratase, large subunit [Methanohalophilus
mahii DSM 5219]
Length = 428
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 229/391 (58%), Gaps = 30/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFSRAS K ++ GD V N+D+ MTHD+ GP G + I K E KVWD
Sbjct: 9 MTISEKIFSRASGK-EVKAGDFVLANIDLAMTHDITGPLAVDGFYEIMKGR--EEKKVWD 65
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVI+ DH + A +N +LR+F EQNI YD+ Y+GVCH
Sbjct: 66 PSKIVILFDHQVPADSLHAAKNHIMLREFAKEQNI-LNYDV-----------YEGVCHQV 113
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ ++GH +PG++++G+DSHTC G+ G F+TG+G+TD VL +GK+ +VP T+RF ++
Sbjct: 114 VPEKGHVKPGDLVVGSDSHTCAYGSLGAFSTGVGSTDMAAVLASGKLWFRVPQTIRFEVE 173
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+ + +KDLIL +IG++ V GA Y + E+ G+TV LS+ ERMT+ NM +E GGK G
Sbjct: 174 GKLPERVYSKDLILHLIGDVGVEGARYMAAEYAGSTVRSLSISERMTMSNMAIEMGGKAG 233
Query: 305 VVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ D T KYL+++ +P + SD A +L +D+S LEP +A PH+ DN
Sbjct: 234 IIEPDVVTEKYLQERIPGYKLDPYWASDGGADYLDVRHYDVSNLEPQLACPHNVDNVKPV 293
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + K+D+V++GSCT G+ ED A + V ++PA++ +M
Sbjct: 294 SEVEGTKVDQVFVGSCTNGRFEDLEIVANMMGDEPVAEGVRLLIIPASRTEYMKALR--- 350
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG S CG C+GG
Sbjct: 351 -----AGYIEQFMEAGA-IVESACCGPCMGG 375
>gi|384209551|ref|YP_005595271.1| 3-isopropylmalate dehydratase large subunit [Brachyspira intermedia
PWS/A]
gi|343387201|gb|AEM22691.1| 3-isopropylmalate dehydratase large subunit [Brachyspira intermedia
PWS/A]
Length = 415
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K +G + KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVEKVEAGELIMVKTDLVLGNDITSPVAINEFEK-YGFD-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I +YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TG+V KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGQVWFKVPSAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACIANMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+D Y +D+ A + EY D+S +EP VA PH P+N A+E K++
Sbjct: 229 DDQTIEYLKDIVKRDYTIFKADDDAVYDKEYDIDLSSIEPTVACPHLPENTKEAKELKNI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKKV V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMATAANIL--KGKKVAKGVRCIVIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|114567650|ref|YP_754804.1| 3-isopropylmalate dehydratase large subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338585|gb|ABI69433.1| 3-isopropylmalate dehydratase, large subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 419
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 232/402 (57%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI +R + + L PG+ + +D+++ +DV P + FKK G + KV+D+ +
Sbjct: 2 GMTISQKILARHAGRKMLEPGELINCQLDLVLGNDVTAPVAIAEFKK-LGID-KVYDQSR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDH+ D ++ ILRDF + I+ +++I +G + H L +
Sbjct: 60 VVLVPDHFTPNKDIKSAEQCKILRDFARQYEIENYFEIGQMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT GA G FATG+G+TD + TG+ KVP +++FV G +
Sbjct: 110 QGLVVPGDLIIGADSHTCTYGALGAFATGVGSTDMAAGMATGEAWFKVPESIKFVYYGHL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ KDLIL IG+I V GA Y SMEF G ++ LSM+ R T+ NM +EAGGKNG+
Sbjct: 170 PRWVGGKDLILHTIGDIGVDGARYMSMEFTGEVIQNLSMDNRFTMANMAIEAGGKNGIFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y++ + P+E SD A + +D+SKLEP+VA PH P+N E
Sbjct: 230 ADEITLDYVKKRVKRPFELYQSDPDAVYFDIKEYDVSKLEPVVAFPHLPENTRPVTEATH 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
V +D+V IGSCT G+ ED A L G+KV ++ + P T++++++
Sbjct: 290 VSLDQVVIGSCTNGRIEDMEITAS--LLKGQKVHPEIRVIIFPGTREIYLEALR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F EAG ++P+CG CLGG AR + +A+
Sbjct: 342 --RGYIETFIEAGA-VVSTPTCGPCLGGHMGILARGEKALAT 380
>gi|407464307|ref|YP_006775189.1| 3-isopropylmalate dehydratase [Candidatus Nitrosopumilus sp. AR2]
gi|407047495|gb|AFS82247.1| 3-isopropylmalate dehydratase [Candidatus Nitrosopumilus sp. AR2]
Length = 423
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 224/395 (56%), Gaps = 22/395 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIF---KKEFGENAKVWDR 125
M + EKI +R + K +SP D V+ NVD +M HDV GPG +F KK+ K+WD
Sbjct: 1 MNIVEKILARGAGKSSVSPDDVVFANVDKVMMHDVSGPGVIKVFDKLKKQGFSVDKLWDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ + DH++ ++++ + N+ L +F I+ +FK G+CH
Sbjct: 61 TKVWVAEDHFVPSAEKVSAENIVKLSNFTKNYGIEK--------HFKYGMGQYGICHTIS 112
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PGE+ +G DSHT T GA G FA G+G+TD +VL GK+ KVP T F L+G
Sbjct: 113 HEEAMVLPGEIYVGGDSHTNTTGALGAFACGLGHTDIAYVLLNGKIWFKVPETYYFKLNG 172
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++P++++AKD IL+IIG+I G Y++M+F G+ ++ +S+E R+TLCNM EAG KNG+
Sbjct: 173 KLPEHVMAKDFILKIIGDIGNDGGAYRTMQFGGSGIDEMSVESRLTLCNMTTEAGAKNGI 232
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
V D YL + + + D + + + ++ S++EP VAKP SP+N + RE
Sbjct: 233 VEPDQKVSDYLSQRGATNMNLIKGDADSEYAKVFEYEASEMEPTVAKPFSPENICVVREA 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+ YIGSCTG K ED +AAA + G+KVK+ T ++PA ++
Sbjct: 293 PSVELDKSYIGSCTGAKYEDLVAAASIL--KGRKVKIRTEILPAAISIYQRAME------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+IF +AG T P+CGAC G A+
Sbjct: 345 --NGLLKIFLDAGV-TVGPPTCGACCGAHMGVLAK 376
>gi|429124130|ref|ZP_19184662.1| 3-isopropylmalate dehydratase large subunit [Brachyspira hampsonii
30446]
gi|426279860|gb|EKV56879.1| 3-isopropylmalate dehydratase large subunit [Brachyspira hampsonii
30446]
Length = 415
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 225/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K +G N KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVKTDLVLGNDITSPVAINEFEK-YGFN-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I +YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GAFG F+TG+G+TD + TG+V KVP ++F L G++
Sbjct: 109 GLVAPGELIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGEVWFKVPSAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACIANMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+D Y +D+ A + EY D+S +EP VA PH P+N A+E K +
Sbjct: 229 DNQTVEYLKDIVKRDYTIFKADDDAVYEKEYDIDLSAIEPTVACPHLPENTKEAKELKGI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKK+ V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMATAANIL--KGKKIAKDVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|225619973|ref|YP_002721230.1| 3-isopropylmalate dehydratase large subunit [Brachyspira
hyodysenteriae WA1]
gi|225214792|gb|ACN83526.1| 3-isopropylmalate dehydratase large subunit [Brachyspira
hyodysenteriae WA1]
Length = 415
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K +G + KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVEKVEAGELIMVKTDLVLGNDITSPVAINEFEK-YGFD-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I +YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TG+V KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGQVWFKVPSAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACIANMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+D Y +D+ A + EY D+S +EP VA PH P+N A+E K++
Sbjct: 229 DDQTIEYLKDIVKRDYTVFKADDDAVYDKEYDIDLSLIEPTVACPHLPENTKEAKELKNI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKKV V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMATAANIL--KGKKVAKGVRCIVIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|445062379|ref|ZP_21374773.1| 3-isopropylmalate dehydratase large subunit [Brachyspira hampsonii
30599]
gi|444506247|gb|ELV06615.1| 3-isopropylmalate dehydratase large subunit [Brachyspira hampsonii
30599]
Length = 415
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 225/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + V D+++ +D+ P + F+K +G + KV+D+EKI
Sbjct: 1 MTITQKILAAHAGVDKVEAGELIMVKTDLVLGNDITSPVAINEFEK-YGFD-KVFDKEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A RDF + +I +YD+ D+G V H L ++
Sbjct: 59 ALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMG----------VEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GAFG F+TG+G+TD + TG+V KVP ++F L G++
Sbjct: 109 GLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGQVWFKVPSAIKFNLKGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF V L+M++R + NM +EAG KNG+
Sbjct: 169 PNVSGKDVILHIIGMIGVDGALYKSMEFRCEGVSSLTMDDRACIANMAIEAGAKNGIFEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+D Y +D+ A + EY D+S +EP VA PH P+N A+E KD+
Sbjct: 229 DNQTIEYLKDIVKRDYTIFKADDDAVYEKEYDIDLSSIEPTVACPHLPENTKDAKELKDI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V IGSCT G+ D AA + GKK+ V ++PATQKV+ + L
Sbjct: 289 KVDQVVIGSCTNGRLSDMATAANIL--KGKKIAKNVRCIIIPATQKVYKECIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC ++P+CG CLGG
Sbjct: 343 ----MDIFIDAGC-AVSTPTCGPCLGG 364
>gi|435850425|ref|YP_007312011.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661055|gb|AGB48481.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 428
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 227/394 (57%), Gaps = 26/394 (6%)
Query: 64 SVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG--ENAK 121
++ MT+ EKIFS+AS K + G+ V N+D MTHD+ GP + F + + K
Sbjct: 4 NINYPMTIAEKIFSKASGK-AVKAGEFVLANIDRAMTHDITGPLAIDGFYEIMASKQEKK 62
Query: 122 VWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVC 181
VWD KIVII DH + A N LR F EQ I YD+ Y+G+C
Sbjct: 63 VWDPSKIVIIFDHQVPADSLNAAANHIKLRKFSQEQGI-LNYDV-----------YEGIC 110
Query: 182 HIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRF 241
H + ++GH RPG++++G+DSHTC GA G F+TGIG+TD V TGK+ KVP T+RF
Sbjct: 111 HQIMPEKGHVRPGDLVVGSDSHTCAYGAIGAFSTGIGSTDMAAVFATGKLWFKVPDTIRF 170
Query: 242 VLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGG 301
++G++P + +KDLIL +IG+I V GA Y++ E+ G+T+ +S+ ERMT+ NM +E GG
Sbjct: 171 EVEGKLPKMVYSKDLILHLIGDIGVEGARYQAAEYAGSTIHSMSISERMTISNMAIEMGG 230
Query: 302 KNGVVPADGTTFKYLEDKT-SLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDNR 359
K G++ AD T YLE++ ++P + + + SE R +DISKLEP VA PH+ DN
Sbjct: 231 KAGIIEADEITAAYLEERIPDYKFDPYWKPDDGAKYSEIRKYDISKLEPQVACPHNVDNV 290
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E + K+D++++GSCT G+ ED AK+ V ++PA++ ++ V
Sbjct: 291 KPVTEVEGTKLDQIFVGSCTNGRFEDIEVVAKIMGDEPVAKGVRLLVIPASRTEYLKVLK 350
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 351 --------AGYVEQFMEAGAIVEA-PCCGPCMGG 375
>gi|325295557|ref|YP_004282071.1| 3-isopropylmalate dehydratase large subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066005|gb|ADY74012.1| 3-isopropylmalate dehydratase large subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 424
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 226/401 (56%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + K ++ PG+ + VDI + +DV P + K ++ VWDRE+I
Sbjct: 3 MTITQKILADHAGKKEVYPGELIMCKVDIALANDVTAPIAIKQIKALGAKD--VWDRERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH++ D +A V ++RDF E NIK+F+ + G+ H L ++
Sbjct: 61 ALVPDHFVPAKDIKAAEQVKMMRDFAKEFNIKHFW----------SEGRVGIEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G F+TG+G+TD + TG+V KVP ++F+ G+
Sbjct: 111 GVVVPGDVVIGADSHTCTYGALGAFSTGVGSTDMAYAWLTGEVWFKVPEQMKFIYYGKRQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL +IG I V GA YK+ME G + L M++R T+CNM +EAG KNG++
Sbjct: 171 KWVSGKDLILYVIGMIGVDGALYKTMEHTGEAIRDLPMDDRFTICNMAIEAGAKNGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ + PY+ SD A + Y D+SK+EP VA P+ P N E V
Sbjct: 231 DEKTLEYVKGRAKRPYKLYKSDPDAEYSEVYEIDVSKIEPQVAFPYLPSNTRPVTEATHV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ D AA++ GKKV V ++PATQ+++
Sbjct: 291 TIDQVVIGSCTNGRISDLRIAAQIL--KGKKVNPNVRCIVIPATQEIYRQAMK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF EA C ++P+CG CLGG A+ +A+
Sbjct: 342 -EGLIDIFIEAEC-VVSTPTCGPCLGGHMGILAKGERAVAT 380
>gi|327398612|ref|YP_004339481.1| 3-isopropylmalate dehydratase large subunit [Hippea maritima DSM
10411]
gi|327181241|gb|AEA33422.1| 3-isopropylmalate dehydratase large subunit [Hippea maritima DSM
10411]
Length = 424
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 224/389 (57%), Gaps = 25/389 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + S L GD V +VD+ +D+ P S F K G V+DR K
Sbjct: 3 GMTISQKILAAKSGNSSLRAGDIVLADVDLAFANDITAPISID-FVKRLG--VDVFDRGK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D + I+RDF E+++ +++ ++G + H L +
Sbjct: 60 IALIPDHFTPNKDINSANQCKIMRDFVKERDLPLYWESGEVG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G+ +PG +++G DSHTCT GA G FATG+G+TD GF TGK +VP +++FV G+
Sbjct: 110 QGYIKPGMLIVGADSHTCTHGALGSFATGMGSTDVGFAFATGKSWFRVPESIKFVYKGKR 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KDLIL IG+ISVAGA YKSMEF G + LSME+R+T+CNM VEAG KNG+V
Sbjct: 170 NRWVVGKDLILYTIGKISVAGALYKSMEFSGEAIRELSMEDRLTMCNMAVEAGAKNGIVE 229
Query: 308 ADGTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARE 364
D T KYLE++ Y SD+ A + D+S++EP +A PH P N + +++
Sbjct: 230 PDEITIKYLEERGIKEGDYTIFRSDDDAEYSDIIDIDVSQIEPQIAFPHLPSNTKGISQI 289
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+D+KID+ +IGSCT G+ D AA+V + V ++PAT +V+
Sbjct: 290 ERDIKIDQAFIGSCTNGRISDLREAARVLKGNKVAKYVRLIIIPATVEVYKQALK----- 344
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 345 ---EGLFDIFLEAGA-VISTPTCGPCLGG 369
>gi|20090254|ref|NP_616329.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina
acetivorans C2A]
gi|22001712|sp|Q8TQZ3.1|LEUC2_METAC RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|19915249|gb|AAM04809.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
Length = 420
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 225/391 (57%), Gaps = 30/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFS+AS P + GD V N+D+ MTHD+ GP G + I + E E KVWD
Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EEKKVWD 57
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVII DH + A N +LR F EQ I YD+ Y+GVCH
Sbjct: 58 PSKIVIIFDHQVPADSINAAENHIMLRKFAKEQGI-LNYDV-----------YEGVCHQV 105
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++GH PG++++G+DSHTC G+ G F+TGIG+TD V TGK+ +VP T RF ++
Sbjct: 106 LPEKGHVLPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPETFRFEVE 165
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+ + +KDLIL +IG++ V GA Y + E+ G+T+ LS+ ERMT+ NM +E GGK G
Sbjct: 166 GKLPERVYSKDLILHLIGDVGVEGARYMAAEYAGSTIRSLSIPERMTISNMAIEMGGKAG 225
Query: 305 VVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ AD T YL+++ +P + SDE+A +L +D+S LEP VA PH+ DN
Sbjct: 226 IIEADEVTEAYLQERIPGYKLDPYWKSDEEAKYLDIRHYDVSDLEPQVACPHNVDNVKSV 285
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + K+D+V++GSCT G+ ED A + V +VPA++ +M +
Sbjct: 286 SEVEGTKLDQVFMGSCTNGRFEDIKIMADIMGDEPVAKGVRLLVVPASKTEYMKLLK--- 342
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ AG A P CG C+GG
Sbjct: 343 -----AGYVEKLMNAGAIVEA-PCCGPCMGG 367
>gi|57234424|ref|YP_181555.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
ethenogenes 195]
gi|57224872|gb|AAW39929.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides
ethenogenes 195]
Length = 416
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 222/385 (57%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + S K Q+SPGD + VD+++ +D+ P + FKK G +KV+D +KI
Sbjct: 1 MNLVEKILAAHSGKTQVSPGDFINAKVDLVLANDITAPIAVKEFKK-IGV-SKVFDPKKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 59 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVPPT++F G++P
Sbjct: 108 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPPTIKFNYSGKLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y +M F G ++ LSME R T+ NM +EAGGK G+
Sbjct: 168 KWIGGKDLILFTIGQIGVDGALYSAMYFCGEAIDALSMENRFTMSNMAIEAGGKAGLFRV 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISKLEP V+ PHSP N + +
Sbjct: 228 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKLEPQVSLPHSPANARPISQIGKI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 288 KVDQVIIGSCTNGRLEDLAISAKLLEGNKVSPDLRTIVIPGSQQVYLDALK--------A 339
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 340 GYIETFINAGVAV-STPTCGPCLGG 363
>gi|428202772|ref|YP_007081361.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Pleurocapsa sp. PCC 7327]
gi|427980204|gb|AFY77804.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Pleurocapsa sp. PCC 7327]
Length = 572
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 223/390 (57%), Gaps = 24/390 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT+ EK+ +RAS + PG+ ++ VD+ M+HD +F + FGENAKVW+ K
Sbjct: 145 SMTMAEKMLARASGNAFVQPGEVIFAKVDLAMSHDAIAGPVAQLFYQHFGENAKVWNANK 204
Query: 128 IVIIPDHYI----FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
+V++ DH+I DE A + + F EQ + D+ G + G+CH+
Sbjct: 205 VVLVADHFIQINDIRKDEGATKMHQQMVQFAREQGC-HLLDVVSPG------EAAGICHV 257
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L ++G RPG V+ GTDSH+CT GAFG F+TG+G TD + TG + ++VP TL F L
Sbjct: 258 LLPEKGFIRPGMVIAGTDSHSCTYGAFGCFSTGVGTTDMANLFATGDMWIRVPGTLLFEL 317
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
G +P + AKD++L I+G+I GAT K++EF G+ +E+L ++ERMTL NM +E G
Sbjct: 318 SGTLPKQIGAKDIMLFILGQIGCNGATGKAIEFRGSIIEQLPIDERMTLANMAIECGAIC 377
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G++ +D T KY++ +T +E + SD A + YRFD+S LEP +A P PD
Sbjct: 378 GLIASDEVTLKYVQSRTQEEFEVITSDRDAEYEEIYRFDLSSLEPQIACPQKPDRVVSIG 437
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLP 421
E +V I R +IGSCTGGK D AA+V G++V +V F+VPA+ +V L
Sbjct: 438 ELGEVPITRAFIGSCTGGKLFDLAQAAEVL--KGRRVDPRVSLFVVPASGEVRQKAQELG 495
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
I E+AG S CGAC+
Sbjct: 496 Y--------LDILEQAGAQVLKS-GCGACI 516
>gi|317122600|ref|YP_004102603.1| 3-isopropylmalate dehydratase large subunit [Thermaerobacter
marianensis DSM 12885]
gi|315592580|gb|ADU51876.1| 3-isopropylmalate dehydratase, large subunit [Thermaerobacter
marianensis DSM 12885]
Length = 433
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 220/390 (56%), Gaps = 22/390 (5%)
Query: 64 SVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVW 123
+ + MT+TEKI + + P + PG V V VD LM +D+ P + F+ E G +V+
Sbjct: 2 AAQRPMTITEKILAAHAGVPWVEPGQLVEVRVDFLMANDITAPLAIRAFR-EMGAT-RVF 59
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
D E++ I+ H+ + D R+ + R+F EQ + ++Y++ + G+ H
Sbjct: 60 DPERVAIVLSHFAPSKDIRSADQCKVAREFAREQGLVHYYEMGE-----------GIEHA 108
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L G PGE++LG DSHTCT GA G F+TG+G+TD + + TG+ LKVP TL+FV
Sbjct: 109 LLPDRGLVLPGELVLGADSHTCTYGAVGCFSTGVGSTDLAYAMATGETWLKVPETLKFVY 168
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
+ ++ KDLIL IG IS GATYK+MEF G + LSM+ R+ + NM +EAGGKN
Sbjct: 169 YNRLQPWVTGKDLILYTIGRISCDGATYKAMEFTGEALADLSMDGRLAMANMAIEAGGKN 228
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G+ D T Y+ + P+ PV+SD A + Y FD +++EP VA P SPDN
Sbjct: 229 GIFNPDQRTLDYVAQRAQRPFSPVWSDPDAEYAEVYEFDAAQIEPQVALPWSPDNVRPLS 288
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ + V ID+V+IGSCT G+ +D AA++ +V ++PA++ +++
Sbjct: 289 QVERVPIDQVFIGSCTNGRLDDLRTAARILRGRRVHPEVRAIVIPASRDIYLQALK---- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF AGC AS +CG CLGG
Sbjct: 345 ----EGLIEIFMAAGCVVSAS-TCGPCLGG 369
>gi|150391195|ref|YP_001321244.1| 3-isopropylmalate dehydratase large subunit [Alkaliphilus
metalliredigens QYMF]
gi|149951057|gb|ABR49585.1| 3-isopropylmalate dehydratase, large subunit [Alkaliphilus
metalliredigens QYMF]
Length = 420
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 231/402 (57%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + V++D+++ +D+ P + F K G N +V+D++K
Sbjct: 2 GMTMTQKILAAHAGLDTVEVGQLIQVDLDLVLGNDITTPVAMEEFYK-IGVN-QVFDKKK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D + N ++R+F E I+ +++I +G + H + +
Sbjct: 60 IAIVPDHFTPNKDIKTAENCKLIREFVDEMEIENYFEIGQMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V +G DSHTCT GA G F+TGIG+TD + GK KVP L+F+L G+
Sbjct: 110 KGLVVPGDVGIGADSHTCTYGALGAFSTGIGSTDMAAGMAMGKCWFKVPGALKFILKGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+ NM +EAGGKNG+ P
Sbjct: 170 QEWVSGKDIILHIIGTIGVDGALYKSMEFVGEGIKHLTMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+ + PY +DE A + Y D+S+L P VA PH PDN E D
Sbjct: 230 VDELTLEYVRVHSKRPYTVYRADEDAVYEETYEIDLSRLLPTVAFPHIPDNIRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ +D AAKV GK+V V + PATQK+++D
Sbjct: 290 VKIDQVVIGSCTNGRIQDLRMAAKVM--EGKQVAKGVRVIVFPATQKIYLDAMK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLLETFIKAGA-VVSTPTCGPCLGGHMGVLAKGERAIAT 380
>gi|163783227|ref|ZP_02178221.1| 3-isopropylmalate dehydratase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881561|gb|EDP75071.1| 3-isopropylmalate dehydratase [Hydrogenivirga sp. 128-5-R1-1]
Length = 432
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 228/390 (58%), Gaps = 27/390 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + + ++ PGD + +D+ M +DV P + I +K + +V+D KI
Sbjct: 3 MTITEKILADHAGRKEVKPGDLITAKIDLAMANDVTAPLAIKILEKHGID--RVFDPNKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ H++ D ++ ++R+F + IKYF++ + +G+ H L +
Sbjct: 61 ALVLSHFVPAKDIKSAEQAKLVREFVRKHGIKYFFE-----------EGEGIEHTILPER 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + + TG++ L+VP +++F+ G+
Sbjct: 110 GIVVPGDLVVGADSHTCTYGGIGAFATGVGSTDIAYAMATGEIWLRVPESMKFIFYGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDLIL IGEI V GA Y++MEF G + LS+E+R+T+ NM +EAGGK+G++
Sbjct: 170 AFVMGKDLILHTIGEIGVDGALYRAMEFEGEAIRELSVEQRLTITNMAIEAGGKSGIIAP 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++++ ++ SD A + S Y +D SK+EPLVA P+ P N E +
Sbjct: 230 DDKTIEYVKERAQKEWKVYESDPDAEYHSVYEWDASKIEPLVAWPYLPSNVHPVSESTHI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+D+ +IGSCT G+ ED AAKVF L GKKV V ++PA++ V+M
Sbjct: 290 NVDQAFIGSCTNGRIEDLRIAAKVFESALKQGKKVHPYVRCIVIPASKNVYMQAMK---- 345
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAGC S +CG CLGG
Sbjct: 346 ----EGLIDIFMEAGCAVSTS-TCGPCLGG 370
>gi|270308134|ref|YP_003330192.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
VS]
gi|270154026|gb|ACZ61864.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
VS]
Length = 417
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 222/385 (57%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + S K Q+SPGD + VD+++ +D+ P + FKK G +KV+D +KI
Sbjct: 2 MNLVEKILAAHSGKTQVSPGDFINAKVDLVLANDITAPIAVKEFKK-IGV-SKVFDPKKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 60 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVPPT++F G++P
Sbjct: 109 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPPTIKFNYTGKLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y +M F G ++ LSME R T+ NM +EAGGK G+
Sbjct: 169 KWIGGKDLILFTIGQIGVDGALYSAMYFCGEAIDALSMENRFTMSNMAIEAGGKAGLFRV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISKLEP V+ PHSP N + +
Sbjct: 229 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKLEPQVSLPHSPANARPISQIGKI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 289 KVDQVIIGSCTNGRLEDLAISAKLLEVNKVNPDLRTIVIPGSQQVYLDALK--------A 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 341 GYIETFINAGVAV-STPTCGPCLGG 364
>gi|21228475|ref|NP_634397.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina mazei
Go1]
gi|20906957|gb|AAM32069.1| 3-isopropylmalate dehydratase [Methanosarcina mazei Go1]
Length = 453
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 229/398 (57%), Gaps = 30/398 (7%)
Query: 62 TGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFG 117
+GS MT++EKIFS+AS P + GD V N+D+ MTHD+ GP G + I + E
Sbjct: 27 SGSDNRPMTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE-- 83
Query: 118 ENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY 177
E+ KVWD KIVII DH + A +N +LR F EQ I YD+ Y
Sbjct: 84 EDKKVWDPSKIVIIFDHQVPADSINAAQNHIMLRKFAKEQGI-LNYDV-----------Y 131
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
+GVCH L ++GH +PG++++G+DSHTC G+ G F+TGIG+TD V TGK+ +VP
Sbjct: 132 EGVCHQVLPEKGHVKPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPE 191
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
T RF ++G++P+ + +KDLIL +IG++ V G Y + E+ G+T+ LS+ ERMT+ NM +
Sbjct: 192 TFRFEVEGKLPERVYSKDLILHLIGDVGVEGVRYMAAEYAGSTIRSLSIPERMTMSNMAI 251
Query: 298 EAGGKNGVVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHS 355
E GGK G++ AD T YL+++ +P + SDE A +L +D+S LEP VA PH+
Sbjct: 252 EMGGKAGIIEADEVTEAYLKERIPGFKLDPYWKSDEGAKYLDIRYYDVSDLEPQVACPHN 311
Query: 356 PDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWM 415
DN E + K+D++++GSCT G+ ED A + + +VPA++ +M
Sbjct: 312 VDNVKPVSEVEGTKLDQIFMGSCTNGRFEDIKIMADIMGDEPVAKNLRLLVVPASKTEYM 371
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + AG A P CG C+GG
Sbjct: 372 KLLK--------AGYIEKLVNAGAIVEA-PCCGPCMGG 400
>gi|319789182|ref|YP_004150815.1| 3-isopropylmalate dehydratase, large subunit [Thermovibrio
ammonificans HB-1]
gi|317113684|gb|ADU96174.1| 3-isopropylmalate dehydratase, large subunit [Thermovibrio
ammonificans HB-1]
Length = 423
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 228/402 (56%), Gaps = 27/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + K ++ PG+ + VDI + +DV P I + + +VWDRE+I
Sbjct: 3 MTITQKILADHAGKKEVHPGELIMCKVDIALANDVTAP--IAIKQVKAIGAKQVWDRERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYK-GVCHIALAQ 187
++PDH++ D +A V ++R+F E NIK+F+ P+ + G+ H L +
Sbjct: 61 ALVPDHFVPAKDIKAAEQVKMMREFAREFNIKHFW-----------PEGRVGIEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TG+G+TD + TG+V KVP ++F+ G+
Sbjct: 110 QGVVVPGDVVIGADSHTCTYGALGAFSTGVGSTDMAYAWLTGEVWFKVPEQMKFIYYGKR 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL +IG I V GA YK+ME G + L M++R T+CNM +EAG KNG++
Sbjct: 170 QRWVGGKDIILYVIGMIGVDGALYKTMEHTGEAIRELPMDDRFTICNMAIEAGAKNGIIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + PY+ SD A + Y D+SK+EP VA P+ P N E
Sbjct: 230 PDEKTLEYVKGRAKRPYKLYKSDPDAEYSEVYEIDVSKIEPQVAFPYLPSNTRPVTEATH 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ D AA++ GKKV V ++PATQ+++
Sbjct: 290 VTIDQVVIGSCTNGRLSDLRVAAQIL--KGKKVNPNVRCIVIPATQEIYRQALK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF EA C ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLIDIFLEAEC-VVSTPTCGPCLGGHMGILAKGERAVAT 380
>gi|116754297|ref|YP_843415.1| 3-isopropylmalate dehydratase large subunit [Methanosaeta
thermophila PT]
gi|116665748|gb|ABK14775.1| 3-isopropylmalate dehydratase, large subunit [Methanosaeta
thermophila PT]
Length = 423
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 218/384 (56%), Gaps = 25/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+EKIFSRA+ K + G+ V ++D M HD+ GP + F + G+ A+VW+ +IV
Sbjct: 12 TLSEKIFSRAANK-EARAGEFVMASIDCAMIHDITGPLAVRGFYEIAGKGARVWNPSRIV 70
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH + +A N +LR F EQ I YD+ + G+CH + + G
Sbjct: 71 ILFDHQVPADSIKAAENHQMLRAFAKEQGI-INYDV-----------FSGICHQVMPENG 118
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG++++GTDSHTCT GA G FATGIG+TD V TGK+ VP TLR V+DG +
Sbjct: 119 HVLPGQLIVGTDSHTCTYGALGAFATGIGSTDMASVFATGKLWFMVPQTLRLVIDGRLRR 178
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+IIG+I GA Y + EF G+ VER+S+ ERMT+ NM +E G K G+V D
Sbjct: 179 RVTSKDVILRIIGDIGADGANYLACEFAGSAVERMSIAERMTMTNMSIEMGAKAGLVEPD 238
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL K L EP+ DE A F E +D++ LEP VA PH DN VK
Sbjct: 239 RVTMTYL--KEWLTEEPIRGDEDAIF-EEKHWDVNDLEPQVAMPHRVDNVVPVSRLPHVK 295
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID++++GSCT G+ ED AA+V V ++PA++K +M +
Sbjct: 296 IDQIFLGSCTNGRFEDLKLAAEVMGDEPVARGVRMIVIPASRKEYMRALRAGL------- 348
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG SP CG C+GG
Sbjct: 349 -IEKFMEAGAIVE-SPCCGPCMGG 370
>gi|452210893|ref|YP_007491007.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina mazei
Tuc01]
gi|452100795|gb|AGF97735.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina mazei
Tuc01]
Length = 420
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 226/391 (57%), Gaps = 30/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFS+AS P + GD V N+D+ MTHD+ GP G + I + E E+ KVWD
Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EDKKVWD 57
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVII DH + A +N +LR F EQ I YD+ Y+GVCH
Sbjct: 58 PSKIVIIFDHQVPADSINAAQNHIMLRRFAKEQGI-LNYDV-----------YEGVCHQV 105
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++GH +PG++++G+DSHTC G+ G F+TGIG+TD V TGK+ +VP T RF ++
Sbjct: 106 LPEKGHVKPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPETFRFEVE 165
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+ + +KDLIL +IG++ V G Y + E+ G+T+ LS+ ERMT+ NM +E GGK G
Sbjct: 166 GKLPERVYSKDLILHLIGDVGVEGVRYMAAEYAGSTIRSLSIPERMTMSNMAIEMGGKAG 225
Query: 305 VVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ AD T YL+++ +P + SDE A +L +D+S LEP VA PH+ DN
Sbjct: 226 IIEADEVTEAYLKERIPGFKLDPYWKSDEGAKYLDIRYYDVSDLEPQVACPHNVDNVKSV 285
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + K+D++++GSCT G+ ED A + + +VPA++ +M +
Sbjct: 286 SEVEGTKLDQIFMGSCTNGRFEDIKIMADIMGDEPVAKNLRLLVVPASKTEYMKLLK--- 342
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ AG A P CG C+GG
Sbjct: 343 -----AGYIEKLVNAGAIVEA-PCCGPCMGG 367
>gi|295106180|emb|CBL03723.1| 3-isopropylmalate dehydratase, large subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 446
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 225/405 (55%), Gaps = 23/405 (5%)
Query: 51 APQQSERRPATTGS--VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGS 108
AP + RP T + MT+ EKI + + ++ PG + ++D+++++DV P +
Sbjct: 9 APPRGFARPTATKEQPMPRPMTMAEKILAAHAGLDEVEPGQLIECDLDLVLSNDVTAPIA 68
Query: 109 FGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDL 168
F+K E KV+D EKI ++PDHY+ D ++ I+RDF EQ I ++Y++ +
Sbjct: 69 VKEFRKIGVE--KVFDPEKIALVPDHYVPNKDIKSAEQAKIVRDFAREQGITHYYEVGCM 126
Query: 169 GNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGT 228
G V H L ++G G++++G DSHTCT GA G FATG+G+TDAG T
Sbjct: 127 G----------VEHALLPEQGVVGAGDLIIGADSHTCTYGALGAFATGVGSTDAGVGYAT 176
Query: 229 GKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEE 288
GK KVP +L F ++GE+ + KD+IL IIG I V GA Y++MEF G+ + + M+E
Sbjct: 177 GKAWFKVPESLLFKIEGELAPGVTGKDVILHIIGMIGVDGALYQAMEFTGSAIRTMGMDE 236
Query: 289 RMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEP 348
RM++ NM +EAGGK G++ D T Y++ +T PY +SD A + Y D + + P
Sbjct: 237 RMSISNMAIEAGGKAGLIEVDDVTRAYMDGRTERPYTEYHSDPDAMYAKVYEIDAASIVP 296
Query: 349 LVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVP 408
V+ PH P N A E +D+KID+ IGSCT G+ D AA V V ++P
Sbjct: 297 TVSFPHLPSNTRPAAEARDIKIDQAVIGSCTNGRIVDMRQAADVLRGRKIHPDVRCIVIP 356
Query: 409 ATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
ATQ V+ + +F +A C ++P+CG CLGG
Sbjct: 357 ATQAVYRQCME--------EGLMDVFLDANCAV-STPTCGPCLGG 392
>gi|339445702|ref|YP_004711706.1| hypothetical protein EGYY_22220 [Eggerthella sp. YY7918]
gi|338905454|dbj|BAK45305.1| hypothetical protein EGYY_22220 [Eggerthella sp. YY7918]
Length = 422
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 224/387 (57%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + ++ PG + ++D+++++DV P + F+K E KV+D KI
Sbjct: 5 MTMAEKILAAHAGLDEVEPGQLIECDLDLVLSNDVTAPIAVKEFRKIGVE--KVFDPTKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDHY+ D ++ I+RDF EQ I ++Y++ +G V H L ++
Sbjct: 63 ALVPDHYVPNKDIKSAEQAKIVRDFAREQGITHYYEVGCMG----------VEHALLPEQ 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G FATG+G+TDAG TGK KVP +L F ++GE+
Sbjct: 113 GVVGAGDLIIGADSHTCTYGALGAFATGVGSTDAGVGYATGKAWFKVPESLLFKIEGELA 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA Y++MEF G+ ++ + M+ERM++ NM +EAGGK G++
Sbjct: 173 PGVTGKDVILHIIGMIGVDGALYQAMEFTGSAIKNMDMDERMSISNMAIEAGGKAGLIEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++ + PY +SD A + Y D + ++P VA PH P N A E +DV
Sbjct: 233 DDVTRAYMDGRVERPYTEYHSDPDAVYAKVYEIDAASIQPTVAFPHLPSNTRPAAEARDV 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KID+ IGSCT G+ D AA+V G+K+ V ++PATQ+V+
Sbjct: 293 KIDQAVIGSCTNGRIADMRQAAEVL--RGRKIHPDVRCIVIPATQQVYRQCME------- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +F +A C ++P+CG CLGG
Sbjct: 344 -EGLMDVFLDANCAV-STPTCGPCLGG 368
>gi|206890039|ref|YP_002248705.1| 3-isopropylmalate dehydratase, large subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226736009|sp|B5YKE0.1|LEUC_THEYD RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|206741977|gb|ACI21034.1| 3-isopropylmalate dehydratase, large subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 421
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 233/401 (58%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + K +++PG+ + VDI++ +D+ P + F+K ++ V+DRE+I
Sbjct: 3 MTIAEKILAAHAGKKEVTPGEIINAKVDIVLANDITAPIAIKEFEKLGVKD--VFDRERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D +A +LR+F + IK++++I +G + H L +E
Sbjct: 61 ALVPDHFTPQKDIKAAEQCKMLREFAQKYKIKHYFEIGRVG----------IEHALLPEE 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TDA + TG+ KVP T++F+ G++
Sbjct: 111 GIVLPGDLVIGADSHTCTYGALGAFATGVGSTDAAIAMATGECWFKVPETIKFIYYGKLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA+Y +MEF+G ++ + M R ++CNM +EAG K G++
Sbjct: 171 KWVSGKDLILYTIGDIGVDGASYMAMEFIGEVIDNMPMSGRFSMCNMAIEAGAKAGIIVP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ + PY+ SD+ A + +D S++ P+VA PH P N A E +
Sbjct: 231 DKITEEYVKLRAKRPYKIYNSDQDAKYFEIKEYDCSRIPPVVACPHLPSNVKPANELSHI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ ED AA V G+KV +V ++PATQK++M
Sbjct: 291 KIDQVVIGSCTNGRLEDLREAAMVL--KGRKVHPEVRMIIIPATQKIYMQALK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +A + P+CG CLGG A+ +A+
Sbjct: 342 -EGLIEIFIDAQA-VVSPPTCGPCLGGHMGILAKGERAIAT 380
>gi|31563180|sp|Q8PUG1.2|LEUC2_METMA RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
Length = 420
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 226/391 (57%), Gaps = 30/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFS+AS P + GD V N+D+ MTHD+ GP G + I + E E+ KVWD
Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EDKKVWD 57
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVII DH + A +N +LR F EQ I YD+ Y+GVCH
Sbjct: 58 PSKIVIIFDHQVPADSINAAQNHIMLRKFAKEQGI-LNYDV-----------YEGVCHQV 105
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++GH +PG++++G+DSHTC G+ G F+TGIG+TD V TGK+ +VP T RF ++
Sbjct: 106 LPEKGHVKPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPETFRFEVE 165
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P+ + +KDLIL +IG++ V G Y + E+ G+T+ LS+ ERMT+ NM +E GGK G
Sbjct: 166 GKLPERVYSKDLILHLIGDVGVEGVRYMAAEYAGSTIRSLSIPERMTMSNMAIEMGGKAG 225
Query: 305 VVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ AD T YL+++ +P + SDE A +L +D+S LEP VA PH+ DN
Sbjct: 226 IIEADEVTEAYLKERIPGFKLDPYWKSDEGAKYLDIRYYDVSDLEPQVACPHNVDNVKPV 285
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + K+D++++GSCT G+ ED A + + +VPA++ +M +
Sbjct: 286 SEVEGTKLDQIFMGSCTNGRFEDIKIMADIMGDEPVAKNLRLLVVPASKTEYMKLLK--- 342
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ AG A P CG C+GG
Sbjct: 343 -----AGYIEKLVNAGAIVEA-PCCGPCMGG 367
>gi|410583006|ref|ZP_11320112.1| 3-isopropylmalate dehydratase, large subunit [Thermaerobacter
subterraneus DSM 13965]
gi|410505826|gb|EKP95335.1| 3-isopropylmalate dehydratase, large subunit [Thermaerobacter
subterraneus DSM 13965]
Length = 433
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 219/390 (56%), Gaps = 22/390 (5%)
Query: 64 SVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVW 123
+ + MT+TEKI + + P + PG V V VD LM +D+ P + F+ E G +V+
Sbjct: 2 AAQRPMTITEKILAAHAGVPWVEPGQLVEVRVDFLMANDITAPLAIRAFR-EMGAT-RVF 59
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
D E++ I+ H+ + D R+ + R+F EQ + ++Y++ + G+ H
Sbjct: 60 DPERVAIVLSHFAPSKDIRSADQCKVAREFAREQGLVHYYEMGE-----------GIEHA 108
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L G PGE++LG DSHTCT GA G F+TG+G+TD + + TG+ LKVP TL+FV
Sbjct: 109 LLPDRGLVLPGELVLGADSHTCTYGAVGCFSTGVGSTDLAYAMATGETWLKVPETLKFVY 168
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
+ ++ KDLIL IG IS GATYK+MEF G + LSM+ R+ + NM +EAGGKN
Sbjct: 169 YNRLQPWVTGKDLILYTIGRISCDGATYKAMEFTGEALAGLSMDGRLAMANMAIEAGGKN 228
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G+ D T Y+ + P PV+SD A + Y FD +++EP VA P SPDN
Sbjct: 229 GIFNPDQRTLDYVARRAQRPCSPVWSDPDAEYAEVYEFDAARIEPQVALPWSPDNVRPLS 288
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ + V ID+V+IGSCT G+ +D AA++ +V ++PA++ +++
Sbjct: 289 QVERVPIDQVFIGSCTNGRLDDLRTAARILRGRRVHPEVRAIVIPASRDIYLQALK---- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF AGC AS +CG CLGG
Sbjct: 345 ----EGLIEIFMAAGCVVSAS-TCGPCLGG 369
>gi|73669660|ref|YP_305675.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina barkeri
str. Fusaro]
gi|72396822|gb|AAZ71095.1| 3-isopropylmalate dehydratase, large subunit [Methanosarcina
barkeri str. Fusaro]
Length = 431
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 226/395 (57%), Gaps = 38/395 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFS+AS P + GD V N+D+ MTHD+ GP G + I K + E KVWD
Sbjct: 12 MTVSEKIFSKASGSP-VKAGDFVLANIDLAMTHDITGPLAVKGFYEIMKDK--EEKKVWD 68
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVI+ DH + A N +LR F EQ I YD+ Y+GVCH
Sbjct: 69 PTKIVIVFDHQVPADSINATANHIMLRKFAEEQGI-LNYDV-----------YEGVCHQV 116
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++GH PG++++G+DSHTC GA G F+TGIG+TD V TGK+ KVP T RF ++
Sbjct: 117 LPEKGHVLPGDLIVGSDSHTCAYGALGAFSTGIGSTDMAAVFATGKLWFKVPETFRFEVE 176
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G +P+ + +KDLIL +IG++ V GA Y + EF G+T+ LS+ ERMT+ NM +E GGK G
Sbjct: 177 GNLPERVYSKDLILHLIGDVGVEGARYMAAEFGGSTIHSLSIPERMTMSNMAIEMGGKAG 236
Query: 305 VVPADGTTFKYLEDKTS-LPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ AD T YL+++ ++P + SDE A ++ +D+S LEP VA PH DN
Sbjct: 237 IIEADEVTANYLKERIMYYEFDPYWKSDEDAKYVGIRHYDVSDLEPQVACPHHVDNVKPV 296
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV----Y 418
E + K+D++++GSCT G+ ED A + V +VPA++ ++ + Y
Sbjct: 297 TEVEGTKLDQIFVGSCTNGRFEDIKIMADIMGDEPVAKGVRLLVVPASRTEYLKLLKAGY 356
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +G I E SP CG C+GG
Sbjct: 357 IEKLMNAGA-----IVE--------SPCCGPCMGG 378
>gi|91773824|ref|YP_566516.1| 3-isopropylmalate dehydratase large subunit [Methanococcoides
burtonii DSM 6242]
gi|91712839|gb|ABE52766.1| Homoaconitase large subunit [Methanococcoides burtonii DSM 6242]
Length = 428
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 228/391 (58%), Gaps = 30/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT++EKIFS+AS K + GD V N+D MTHD+ GP G + I + + E KVWD
Sbjct: 9 MTISEKIFSKASGK-TVKAGDFVLANIDRAMTHDITGPLAVDGFYDIMRDK--EEKKVWD 65
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KIVI+ DH + A+ N +LR F EQ I YD+ Y+GVCH
Sbjct: 66 PSKIVIVFDHQVPADSLNASANHIMLRKFAKEQGI-LNYDV-----------YEGVCHQV 113
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ + GH RPG++++G+DSHTC G+ G F+TG+G+TD V +GK+ +VP T+RF +
Sbjct: 114 MPEMGHVRPGDLIVGSDSHTCAYGSLGAFSTGVGSTDMSAVFASGKLWFRVPETIRFEAN 173
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P ++ +KDLIL +IG++ GA Y + E+ G+ +E L++ ERMT+ NM +E GGK G
Sbjct: 174 GKLPKHVYSKDLILHMIGDVGAEGARYMAAEYAGSAIEGLTISERMTISNMAIEMGGKAG 233
Query: 305 VVPADGTTFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ AD TT YL+++ ++P + SDE A + + +++S LEP VA PH+ DN
Sbjct: 234 IIEADKTTEAYLKERIPDYEFDPYWKSDEDAEYAEFHDYNVSDLEPQVACPHNVDNVKPV 293
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + K+D+V++GSCT G+ ED A++ V ++PA++ +M V
Sbjct: 294 SEVEGTKVDQVFVGSCTNGRFEDIKIVAEMMGDEPVAKDVRLLIIPASRTEYMKVLR--- 350
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 351 -----AGYVEQFMEAGAIVEA-PCCGPCMGG 375
>gi|383319014|ref|YP_005379855.1| 3-isopropylmalate dehydratase large subunit [Methanocella conradii
HZ254]
gi|379320384|gb|AFC99336.1| 3-isopropylmalate dehydratase, large subunit [Methanocella conradii
HZ254]
Length = 425
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 228/396 (57%), Gaps = 31/396 (7%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENA 120
+ N +T+TEKIFSRAS +P + GD V ++D M HD+ GP G + I + E +
Sbjct: 1 MSNGLTITEKIFSRASGRP-VRAGDFVMASIDRAMAHDITGPLAVEGFYEIMRDE--KEK 57
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
KVWD EKI+I+ DH + A RN +LR F EQ IK+FYD+ ++G+
Sbjct: 58 KVWDPEKIIILFDHQVPADSLNAARNHILLRKFAREQGIKHFYDL-----------HEGI 106
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH + ++GH PG++++G+DSHTC GA G F TGIG+TD V GK+ +VP ++R
Sbjct: 107 CHQVMPEKGHVLPGQLIVGSDSHTCAYGALGAFGTGIGSTDMAAVFALGKLWFRVPESMR 166
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
F ++G++ D + +KD+IL++IG++ GA YK+ E+ G + RL + +RMT+ NM +E G
Sbjct: 167 FEVNGKLGDRVYSKDIILKLIGDVGADGARYKACEYAGEAIRRLDVSQRMTISNMAIEMG 226
Query: 301 GKNGVVPADGTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
GK G++ DG T KY+ ++ S Y E + SDE A + +D++ + P VA PH+ D
Sbjct: 227 GKAGIIEPDGKTEKYVRER-SPGYRLDEGLKSDEDAEYAEVREYDVTGMPPQVACPHNVD 285
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV 417
N + + +ID+V++GSCT G+ ED AA+V V ++PA+ +M
Sbjct: 286 NVVDIDKIEGKRIDQVFLGSCTNGRFEDLRIAAEVMDGRPVAKGVRMIVIPASHTEYMKA 345
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F AG SP CG C+GG
Sbjct: 346 LRAGL--------IEEFVSAGA-LVESPCCGPCMGG 372
>gi|284047536|ref|YP_003397875.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus
fermentans DSM 20731]
gi|283951757|gb|ADB46560.1| 3-isopropylmalate dehydratase, large subunit [Acidaminococcus
fermentans DSM 20731]
Length = 421
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 231/392 (58%), Gaps = 33/392 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT T+KI +R + +P++ G+ + VD+ + +D+ GP + F K G V++++K
Sbjct: 2 GMTRTQKILARHAGRPEVEEGELLVSQVDLTLANDITGPPAIDEFDK-IGR--PVFNKDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ +RDF + NI ++++ +G + H +
Sbjct: 59 IALVPDHFSPPKDIKSATLCKHMRDFARKHNITNYFEVGRMG----------IEHALVPD 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PGE+++G DSHTCT GA F+TG+G TD G + +G+ KVP ++ VL G+
Sbjct: 109 SGLVAPGELVIGADSHTCTYGAVNAFSTGVGQTDLGAAMASGQTWFKVPKAIKVVLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PDY+ KD+IL +IG I V GA Y+S+EF G V LSM +R T+CNM +EAGGKNG+ P
Sbjct: 169 PDYISGKDVILTLIGMIGVDGALYQSLEFFGEGVGELSMADRFTICNMAIEAGGKNGIFP 228
Query: 308 ADGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +YL+++ + P+E V +DE A + ++ KL P+VA PH P+N A E K
Sbjct: 229 VDDKTREYLKERGVTRPWEAVEADEDAVYARTITIELDKLVPVVAYPHLPENTHPAAEGK 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVW---MDVYTLP 421
D+ ID+V IGSCT G+ ED ++AA++ G+KV +V ++PATQ+++ MD L
Sbjct: 289 DLAIDQVVIGSCTNGRYEDLVSAARIL--KGRKVDPRVRCIIIPATQEIYKRAMDNGLL- 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF EAG ++P+CG CLGG
Sbjct: 346 ----------DIFIEAGAAV-STPTCGPCLGG 366
>gi|298675662|ref|YP_003727412.1| homoaconitate hydratase family protein [Methanohalobium evestigatum
Z-7303]
gi|298288650|gb|ADI74616.1| homoaconitate hydratase family protein [Methanohalobium evestigatum
Z-7303]
Length = 427
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 231/396 (58%), Gaps = 40/396 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKK--EFGENAKVWDRE 126
MT++EKI S+AS + GD V+ ++D MTHD+ GP + F + E EN KVWD
Sbjct: 8 MTISEKIMSKAS-GTNVRAGDFVFADIDRAMTHDITGPLAVKGFYEIMENKENPKVWDPN 66
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KIVII DH + A N +LR+F EQ I YD+ Y+G+CH +
Sbjct: 67 KIVIIFDHQVPADSLNAASNHIMLREFAKEQAI-LNYDV-----------YEGICHQVMP 114
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++GH +PG++++G+DSHTC GA G F+TG+G+TD V +GK+ KVP T+RF +DGE
Sbjct: 115 EKGHIKPGDLVVGSDSHTCAYGAIGAFSTGVGSTDMAAVFASGKLWFKVPETIRFEIDGE 174
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+PD + +KD+IL +IG++ A YK+ EF G+ V +S+ ERMT+ NM +E GGK G++
Sbjct: 175 LPDNVYSKDVILHVIGDVGADCAMYKTAEFGGSAVRNMSVSERMTMSNMAIEMGGKAGII 234
Query: 307 PADGTTFKYLEDKTSLPYEPVY-------SDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+D T Y++++ P Y SD+ A++ ++D+S LEP VA PH+ DN
Sbjct: 235 ESDKVTEDYIKERV-----PGYKLDSEWKSDDGANYSEIRKYDVSNLEPQVACPHNVDNV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
E + ++D+V+IGSCT G+ ED AAK+ GKKV V ++PA++ +M +
Sbjct: 290 KPVTEVEGTELDQVFIGSCTNGRYEDLEIAAKIM--DGKKVADNVRLLIIPASRTEYMKL 347
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG SP CG C+GG
Sbjct: 348 LK--------AGYIEQFMEAGA-IVESPCCGPCMGG 374
>gi|160881480|ref|YP_001560448.1| 3-isopropylmalate dehydratase large subunit [Clostridium
phytofermentans ISDg]
gi|189046472|sp|A9KT79.1|LEUC_CLOPH RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|160430146|gb|ABX43709.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
phytofermentans ISDg]
Length = 421
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 226/387 (58%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + P++ G + N+D+++ +D+ GP I + + + V+D++KI
Sbjct: 3 MTMTQKILAAHANLPEVKAGQLIEANLDLVLANDITGP--VAIHEIQRLKKKTVFDKDKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ + +R+F E +I +++I ++G + H L ++
Sbjct: 61 ALVPDHFTPNKDIKSAEHCKCVREFAKEHDITNYFEIGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE +G DSHTCT GA G F+TG+G+TD G + TGK KVP ++F+L GE
Sbjct: 111 GLIVAGETCIGADSHTCTYGALGAFSTGVGSTDMGAGMITGKAWFKVPAAIKFILTGEPK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+ NM +EAG KNG+ P
Sbjct: 171 EWVSGKDVILHIIGMIGVDGALYKSMEFVGAGIKNLTMDDRFTIANMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+++ + PY +DE A + ++S+LEP VA PH P+N +E +V
Sbjct: 231 DDLTISYMKEHGAKPYTIYEADEDAEYEQIITINLSELEPTVAFPHLPENTKTVKEAGEV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
+ID+V IGSCT G+ D AAKV G+KV + + PATQ +++
Sbjct: 291 RIDQVVIGSCTNGRIGDLRIAAKVL--EGRKVAKGMRAIVFPATQAIYLQAIE------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q F +AGC ++P+CG CLGG
Sbjct: 342 -EGLIQTFIKAGC-VVSTPTCGPCLGG 366
>gi|434400826|ref|YP_007134830.1| homoaconitate hydratase family protein [Stanieria cyanosphaera PCC
7437]
gi|428271923|gb|AFZ37864.1| homoaconitate hydratase family protein [Stanieria cyanosphaera PCC
7437]
Length = 570
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 224/388 (57%), Gaps = 21/388 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EK+ ++AS + PG+ ++ VD+ M+HD +F + FG++AKVWD ++
Sbjct: 145 MTIAEKLLAKASGNQYVQPGEVIFAKVDLAMSHDAIAFPVGQLFYQHFGQDAKVWDANRV 204
Query: 129 VIIPDHYIFTSDERANRN-VDILR---DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
V++ DH+I ++ R + V++ + DF +Q L + A+ + +G+CH+
Sbjct: 205 VLVADHFIQINEIRKDLGAVEMYQGMVDFAKQQGCH-------LLDLVASGEAQGICHVL 257
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++G RPG ++ GTDSH+CT GAFG F+TG+G TD + TG + L+VP TL F L
Sbjct: 258 LPEQGFIRPGMIIAGTDSHSCTYGAFGAFSTGVGTTDMANIFATGDLWLRVPATLLFELS 317
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G +P + AKD++L I+ +I GAT K +EF G+ +E+LS++ERMTL NM +EAG G
Sbjct: 318 GNLPQDISAKDIMLFILSQIGCHGATGKVIEFRGSIIEQLSIDERMTLANMAIEAGAICG 377
Query: 305 VVPADGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
++ D T +YL+ K T + V SD + Y+FD+S LEP +A+P PD
Sbjct: 378 LIAPDHKTIEYLQQKSTKKEFNIVTSDPDTEYEQVYQFDLSNLEPQIARPPKPDQVVNIS 437
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
E +++ I + +IGSCTGGK D AAKV +V F+VPA+Q+V L
Sbjct: 438 ELEEITITKAFIGSCTGGKLNDLAQAAKVLKGHKVASQVSLFVVPASQEVRQQAEKLGYL 497
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACL 451
IF++AG S CGAC+
Sbjct: 498 A--------IFQQAGAQILKS-GCGACI 516
>gi|330507399|ref|YP_004383827.1| 3-isopropylmalate dehydratase large subunit 2 [Methanosaeta
concilii GP6]
gi|328928207|gb|AEB68009.1| 3-isopropylmalate dehydratase large subunit 2 [Methanosaeta
concilii GP6]
Length = 429
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 224/391 (57%), Gaps = 27/391 (6%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+ TL+EKI SRA+ K ++ G+ V NVD M HD+ GP + F + G +A+VWD
Sbjct: 9 SGQTLSEKILSRAANK-EVKAGEFVMANVDGAMIHDITGPLAVKGFYEIAGRDARVWDPT 67
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+IV++ DH + +A N LR F EQ+I YDI + GVCH +
Sbjct: 68 RIVLLFDHQVPADSLKAAENHIQLRKFAAEQDI-LNYDI-----------FCGVCHQVMP 115
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++GH PG V+LGTDSHTCT GAFG FATG+G+TD V TGK+ VP TL+ +++G+
Sbjct: 116 EKGHVLPGNVILGTDSHTCTYGAFGAFATGVGSTDMASVFATGKLWFMVPKTLQIMIEGQ 175
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P + +KD +L+IIG+I GA Y + EF G ER+S+ ERMT+ NM +E G K G+
Sbjct: 176 LPSRVTSKDAVLRIIGDIGADGANYLACEFRGEAAERMSIPERMTVSNMAIEMGAKVGIF 235
Query: 307 PADGTTFKYLE----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
PADGTT YLE D+ ++ V DE A+F S +++S LEP +A PH+ DN
Sbjct: 236 PADGTTKSYLEGRVQDREAIEAGFVKGDEDAAF-SRREWNVSDLEPQIAMPHNVDNVLPI 294
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
+ +ID+V++GSCT G+ ED A+++ V +VPA++ +M +
Sbjct: 295 SQVPQTRIDQVFLGSCTNGRFEDLQLASEMMKNEPLAKGVRMIVVPASRDEYMKCLRAGL 354
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG SP CG C+GG
Sbjct: 355 --------VERFMEAGA-MVESPCCGPCMGG 376
>gi|125974696|ref|YP_001038606.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum ATCC 27405]
gi|256005647|ref|ZP_05430605.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum DSM 2360]
gi|281418835|ref|ZP_06249854.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum JW20]
gi|385780150|ref|YP_005689315.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum DSM 1313]
gi|419721904|ref|ZP_14249057.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum AD2]
gi|419726724|ref|ZP_14253745.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum YS]
gi|166989624|sp|A3DHI4.1|LEUC_CLOTH RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|125714921|gb|ABN53413.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum ATCC 27405]
gi|255990405|gb|EEU00529.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum DSM 2360]
gi|281407919|gb|EFB38178.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum JW20]
gi|316941830|gb|ADU75864.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
thermocellum DSM 1313]
gi|380770008|gb|EIC03907.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum YS]
gi|380782057|gb|EIC11702.1| 3-isopropylmalate dehydratase large subunit [Clostridium
thermocellum AD2]
Length = 419
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 229/402 (56%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++SPG + +D+++ +D+ P + F+K G N KV+D K
Sbjct: 2 GMTMTQKILADHAGLDKVSPGQLIKAKLDMVLGNDITTPVAVKEFRK-IGVN-KVFDVNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D ++ V +R+F E I F+++ +G V H L +
Sbjct: 60 IAIVPDHFTPNKDIKSAEQVKFIREFAREMGIVNFFEVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++FVL G+
Sbjct: 110 KGLVVPGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGEAWFKVPEAMKFVLKGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA Y+SMEF G V LSM++R + NM +EAG KNG+
Sbjct: 170 GKWVSGKDIILHIIGMIGVDGALYRSMEFTGDGVAHLSMDDRFAMANMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ ++ Y+ +DE A +++ Y D+S+++P VA PH P N +
Sbjct: 230 VDEKTIEYVKEHSTRQYKVYKADEDAEYVATYEIDLSQVKPTVAFPHLPSNTRTIDNVGN 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA+V G+KV V ++PATQK+W
Sbjct: 290 IKIDQVVIGSCTNGRIEDLRVAAEVL--KGRKVHKDVRCIIIPATQKIWKQAMN------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLFDIFIDAGAAV-STPTCGPCLGGHMGILAKGERAVAT 380
>gi|260892150|ref|YP_003238247.1| 3-isopropylmalate dehydratase large subunit [Ammonifex degensii
KC4]
gi|260864291|gb|ACX51397.1| 3-isopropylmalate dehydratase, large subunit [Ammonifex degensii
KC4]
Length = 421
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 226/403 (56%), Gaps = 30/403 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV--WDRE 126
MT+TEKI + + K + PG+ V VD+L+ +D+ P + KEF E KV ++
Sbjct: 3 MTITEKILAFHAGKEYVEPGEIVKCRVDVLLANDITAPLAI----KEF-ERLKVPLFEPN 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+V++PDH+ D ++ +R+F I +++++ +G + H L
Sbjct: 58 ALVLVPDHFTPNKDIKSAEQAKTVREFARRHRIPHYFEVGRMG----------IEHCLLP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G G+V++G DSHTCT GA G FATG+G+TD + G+ +VPP+L+FV G+
Sbjct: 108 EQGLVVAGDVVIGADSHTCTYGALGAFATGVGSTDLAAAMALGETWFRVPPSLKFVYTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ KDLIL IG+I V GA Y +MEF G +E LSM+ R T+CNM VEAG KNG++
Sbjct: 168 LKPWVGGKDLILYTIGQIGVEGALYCAMEFTGPVIEELSMDGRFTMCNMAVEAGAKNGII 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T YLE + PY+ SD A + + Y FD+S+LEP VA PHSP N E
Sbjct: 228 APDEKTAAYLEGRARRPYKFFQSDPDARYQAVYEFDVSRLEPQVALPHSPANTRPVTEVT 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+ ID+V IGSCT G+ ED AA+V GKKV V ++P TQ+++
Sbjct: 288 HITIDQVVIGSCTNGRLEDLRVAAQVL--KGKKVHPYVRLIVIPGTQEIYRQALR----- 340
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF EAG ++P+CG CLGG A+ +A+
Sbjct: 341 ---EGLIEIFLEAGGAV-STPTCGPCLGGHMGVLAKGERAVAT 379
>gi|452203617|ref|YP_007483750.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
mccartyi DCMB5]
gi|452205052|ref|YP_007485181.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
mccartyi BTF08]
gi|452110676|gb|AGG06408.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
mccartyi DCMB5]
gi|452112108|gb|AGG07839.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
mccartyi BTF08]
Length = 417
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 218/385 (56%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + K Q+SPGD + VD+++ +D+ P + FKK +KV+D +KI
Sbjct: 2 MNLVEKILAAHCGKTQVSPGDFINAKVDLVLANDITAPIAIKEFKKV--GVSKVFDSKKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 60 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVP T++F G++P
Sbjct: 109 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPQTIKFNYSGKLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+ V GA Y +M F G +E LSME R T+ NM +EAGGK G+
Sbjct: 169 KWIGGKDLILYTIGQTGVDGALYSAMFFCGEAIEALSMENRFTMSNMAIEAGGKAGLFRV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISKLEP V+ PHSP N + +
Sbjct: 229 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKLEPQVSLPHSPANARPVSQIGKI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 289 KVDQVIIGSCTNGRLEDLAVSAKLLKGNVVHPDLRTIVIPGSQQVYLDALK--------A 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 341 GYIETFINAGVAV-STPTCGPCLGG 364
>gi|147669391|ref|YP_001214209.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides sp.
BAV1]
gi|146270339|gb|ABQ17331.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
BAV1]
Length = 416
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 218/385 (56%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + K Q+SPGD + VD+++ +D+ P + FKK +KV+D +KI
Sbjct: 1 MNLVEKILAAHCGKTQVSPGDFINAKVDLVLANDITAPIAIKEFKKV--GVSKVFDSKKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 59 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVP T++F G++P
Sbjct: 108 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPQTIKFNYSGKLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+ V GA Y +M F G +E LSME R T+ NM +EAGGK G+
Sbjct: 168 KWIGGKDLILYTIGQTGVDGALYSAMFFCGEAIEALSMENRFTMSNMAIEAGGKAGLFRV 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISKLEP V+ PHSP N + +
Sbjct: 228 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKLEPQVSLPHSPANARPVSQIGKI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 288 KVDQVIIGSCTNGRLEDLAVSAKLLKGNVVHPDLRTIVIPGSQQVYLDALK--------A 339
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 340 GYIETFINAGVAV-STPTCGPCLGG 363
>gi|336476669|ref|YP_004615810.1| 3-isopropylmalate dehydratase [Methanosalsum zhilinae DSM 4017]
gi|335930050|gb|AEH60591.1| 3-isopropylmalate dehydratase [Methanosalsum zhilinae DSM 4017]
Length = 413
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 224/385 (58%), Gaps = 27/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI SRAS K ++ D V ++D M HD + F++ E KVW+ +KIV
Sbjct: 3 TISEKILSRASGKTAVA-NDFVMADIDYAMAHDGTSILAVKAFREM--EVEKVWNTDKIV 59
Query: 130 IIPDHYI-FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I DH SD A+ DI R++ EQ I+ FYDI GN G+CH L ++
Sbjct: 60 IPFDHLAPANSDTTASLQKDI-RNWIHEQKIRNFYDI---GN--------GICHQVLPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSH+CT GAFG F TG+G TD + +GK+ +VP +++ ++G M
Sbjct: 108 GFAMPGKLIVGADSHSCTYGAFGAFGTGVGATDMAEIFASGKLWFRVPESIKITVEGNMN 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ AKDL L+++G + GATYK++EF G T+ LS+ RMTLCNM +E G K G+VP
Sbjct: 168 KHVCAKDLTLKVVGTVGSDGATYKALEFYGNTISDLSVSGRMTLCNMAIEMGAKTGIVPP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ + Y+PVY+D+ A + E D+ LEP +A+PH DN E +
Sbjct: 228 DNKTLEYVKKRAVDEYDPVYADDDAIYAKEIHIDVEDLEPQIARPHEVDNVCGVSEVEGT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
++D+V+IG+CT G+ ED AA + GK V V T ++PA++ + ++ +
Sbjct: 288 RVDQVFIGTCTNGRLEDLEDAAAIL--EGKDVAVRTIVIPASRDIMIEA-------TKNG 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
T ++ E T A+P CG CLGG
Sbjct: 339 TVEKLLEAGA--TFATPGCGPCLGG 361
>gi|146296353|ref|YP_001180124.1| 3-isopropylmalate dehydratase large subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|166989617|sp|A4XJ48.1|LEUC_CALS8 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|145409929|gb|ABP66933.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 429
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 235/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + KV+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGVD-KVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + +I ++++ ++G + H L ++
Sbjct: 63 TIVPDHFTPNKDIKSAQQCKMVREFAKKYDITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + Y DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSEVYEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILAEGERALAT 383
>gi|258513917|ref|YP_003190139.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257777622|gb|ACV61516.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
acetoxidans DSM 771]
Length = 420
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 231/402 (57%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + K ++ PG+ V V VD+ + +D+ P + F K G ++ V+DREK
Sbjct: 2 GMTVTEKILAAHAGKDKVVPGELVNVKVDLALGNDITAPVAIKEFSK-IGVDS-VFDREK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D + +++F + I F+D+ +G + H L +
Sbjct: 60 IALVLDHFIPAKDIASAEQGKAVKNFAQKHGIVNFFDVGKMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT G G F+TG+G+TD + G+ LKVP ++ FV +GE+
Sbjct: 110 QGLVGPGDLVIGADSHTCTYGGLGAFSTGVGSTDLAAAMALGETWLKVPESMLFVFEGEL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDLIL IIG+I V GA YK+MEF G +E+LSM+ R+T+ NM +EAGGKNG+V
Sbjct: 170 RPWVGGKDLILHIIGDIGVDGALYKAMEFAGPAIEKLSMDGRLTMANMAIEAGGKNGIVA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E + PY SD A + R+D SK+EPLVA PH P+N +
Sbjct: 230 PDEITRAYVEGRVKKPYTFYKSDADAVYSDIRRYDASKIEPLVAFPHLPENTRPVSQAGL 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+V IGSCT G+ ED AA V GKKV ++ ++P TQ+++
Sbjct: 290 VELDQVVIGSCTNGRMEDLRLAAGVL--KGKKVSDRIRLIVIPGTQQIYKQAMR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLIEIFIDAGGAV-STPTCGPCLGGYMGILAKGERSLAT 380
>gi|22002049|sp|O28316.2|LEUC1_ARCFU RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
Length = 418
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 218/388 (56%), Gaps = 27/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL EKIFS+AS K ++ G+ V N+D+ M HD+ P + F++ G +AKVWD+ K
Sbjct: 2 AQTLVEKIFSKASGK-EVKAGEFVMANIDLAMIHDITAPLAIKAFREILGSDAKVWDKSK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+++ DH + A N +LR F EQ I YD+K G+ H +
Sbjct: 61 VIMAFDHQVPADSVHAAENHKMLRKFAEEQGI-LNYDVKG-----------GIAH-QIMV 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E H PG +++G DSHTC GA G FATGIG+TD GFVL GK+ KVP ++RF + G++
Sbjct: 108 ENHVEPGMLIVGADSHTCMYGALGAFATGIGSTDMGFVLAMGKLWFKVPESIRFNVHGKL 167
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD++L++IG + GA YK+ + G VE+L M +R+T+CNM +E GGK G+V
Sbjct: 168 EKHVYGKDIVLKLIGMVGADGANYKACIYSGEVVEKLGMSDRLTMCNMAIEMGGKAGIVE 227
Query: 308 ADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TT +YL+ PYE + SDE A F E D++ +EP VA PH DN E
Sbjct: 228 PDKTTLEYLK-AMGRPYEGELLKSDEDAEF-QEVELDVTGMEPQVAAPHRVDNVVGISEV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ ++D+V+IGSCT G+ ED AA++ V ++PA+ + +
Sbjct: 286 EGTRVDQVFIGSCTNGRYEDLKIAAEILKGEKVASNVRLIVIPASHREYRRALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P CG C+GG
Sbjct: 340 --EGLIEIFVDAGALVEA-PCCGPCMGG 364
>gi|317489798|ref|ZP_07948297.1| 3-isopropylmalate dehydratase [Eggerthella sp. 1_3_56FAA]
gi|316911144|gb|EFV32754.1| 3-isopropylmalate dehydratase [Eggerthella sp. 1_3_56FAA]
Length = 418
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 218/385 (56%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + ++ PG + ++D+++++DV P + F+K E KV++ KI
Sbjct: 1 MTMAEKILAAHAGLDEVEPGQLIECDLDLVLSNDVTAPIAVKEFRKIGVE--KVFNPTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDHY+ D ++ I+RDF EQ I ++Y++ +G V H L ++
Sbjct: 59 ALVPDHYVPNKDIKSAEQAKIVRDFAREQGITHYYEVGCMG----------VEHALLPEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G FATG+G+TDAG TGK KVP +L F ++GE+
Sbjct: 109 GVVGAGDLIIGADSHTCTYGALGAFATGVGSTDAGVGYATGKAWFKVPESLLFKIEGELA 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA Y++MEF G+ + + M+ERM++ NM +EAGGK G++
Sbjct: 169 PGVTGKDVILHIIGMIGVDGALYQAMEFTGSAIRAMDMDERMSISNMAIEAGGKAGLIEV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL+ +T PY +SD A++ Y D + + P V+ PH P N A E +DV
Sbjct: 229 DDVTRAYLDGRTERPYTEYHSDADATYAKVYEIDAASIVPTVSFPHLPSNTRPAAEARDV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+ IGSCT G+ D AA V V ++PATQ V+ +
Sbjct: 289 KIDQAVIGSCTNGRIADMRQAADVLRGRTVHPDVRCIVIPATQAVYRQCME--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+F +A C ++P+CG CLGG
Sbjct: 341 GLMDVFLDANCAV-STPTCGPCLGG 364
>gi|257790351|ref|YP_003180957.1| 3-isopropylmalate dehydratase large subunit [Eggerthella lenta DSM
2243]
gi|325830051|ref|ZP_08163508.1| 3-isopropylmalate dehydratase, large subunit [Eggerthella sp. HGA1]
gi|257474248|gb|ACV54568.1| 3-isopropylmalate dehydratase, large subunit [Eggerthella lenta DSM
2243]
gi|325487518|gb|EGC89956.1| 3-isopropylmalate dehydratase, large subunit [Eggerthella sp. HGA1]
Length = 422
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 218/385 (56%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + ++ PG + ++D+++++DV P + F+K E KV++ KI
Sbjct: 5 MTMAEKILAAHAGLDEVEPGQLIECDLDLVLSNDVTAPIAVKEFRKIGVE--KVFNPTKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDHY+ D ++ I+RDF EQ I ++Y++ +G V H L ++
Sbjct: 63 ALVPDHYVPNKDIKSAEQAKIVRDFAREQGITHYYEVGCMG----------VEHALLPEQ 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G FATG+G+TDAG TGK KVP +L F ++GE+
Sbjct: 113 GVVGAGDLIIGADSHTCTYGALGAFATGVGSTDAGVGYATGKAWFKVPESLLFKIEGELA 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA Y++MEF G+ + + M+ERM++ NM +EAGGK G++
Sbjct: 173 PGVTGKDVILHIIGMIGVDGALYQAMEFTGSAIRAMDMDERMSISNMAIEAGGKAGLIEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL+ +T PY +SD A++ Y D + + P V+ PH P N A E +DV
Sbjct: 233 DDVTRAYLDGRTERPYTEYHSDADATYAKVYEIDAASIVPTVSFPHLPSNTRPAAEARDV 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+ IGSCT G+ D AA V V ++PATQ V+ +
Sbjct: 293 KIDQAVIGSCTNGRIADMRQAADVLRGRTVHPDVRCIVIPATQAVYRQCME--------E 344
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+F +A C ++P+CG CLGG
Sbjct: 345 GLMDVFLDANCAV-STPTCGPCLGG 368
>gi|11499545|ref|NP_070787.1| aconitase [Archaeoglobus fulgidus DSM 4304]
gi|2648576|gb|AAB89290.1| aconitase (acn) [Archaeoglobus fulgidus DSM 4304]
Length = 433
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 218/388 (56%), Gaps = 27/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL EKIFS+AS K ++ G+ V N+D+ M HD+ P + F++ G +AKVWD+ K
Sbjct: 17 AQTLVEKIFSKASGK-EVKAGEFVMANIDLAMIHDITAPLAIKAFREILGSDAKVWDKSK 75
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+++ DH + A N +LR F EQ I YD+K G+ H +
Sbjct: 76 VIMAFDHQVPADSVHAAENHKMLRKFAEEQGI-LNYDVKG-----------GIAH-QIMV 122
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E H PG +++G DSHTC GA G FATGIG+TD GFVL GK+ KVP ++RF + G++
Sbjct: 123 ENHVEPGMLIVGADSHTCMYGALGAFATGIGSTDMGFVLAMGKLWFKVPESIRFNVHGKL 182
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD++L++IG + GA YK+ + G VE+L M +R+T+CNM +E GGK G+V
Sbjct: 183 EKHVYGKDIVLKLIGMVGADGANYKACIYSGEVVEKLGMSDRLTMCNMAIEMGGKAGIVE 242
Query: 308 ADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TT +YL+ PYE + SDE A F E D++ +EP VA PH DN E
Sbjct: 243 PDKTTLEYLK-AMGRPYEGELLKSDEDAEF-QEVELDVTGMEPQVAAPHRVDNVVGISEV 300
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ ++D+V+IGSCT G+ ED AA++ V ++PA+ + +
Sbjct: 301 EGTRVDQVFIGSCTNGRYEDLKIAAEILKGEKVASNVRLIVIPASHREYRRALK------ 354
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P CG C+GG
Sbjct: 355 --EGLIEIFVDAGALVEA-PCCGPCMGG 379
>gi|167044159|gb|ABZ08841.1| putative aconitase family (aconitate hydratase) [uncultured marine
crenarchaeote HF4000_APKG5E24]
Length = 423
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 226/396 (57%), Gaps = 23/396 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA----KVWD 124
M +TEKI +RAS K L PGD ++ NVD +M HDV GPG F+K + K++D
Sbjct: 1 MNITEKILARASGKDMLEPGDVIFANVDKIMLHDVSGPGVIKTFEKLEKDGVVKVDKLFD 60
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+ + DH++ + D+ + N+ L F + I +FK G+CH
Sbjct: 61 PSMVWVAEDHFVPSVDKISAENIVQLSKFTKKFGITK--------HFKYGLGQYGICHTL 112
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+EG PGE+ +G DSHT T GA G FA G+G+TD +VL G + KVP TL F ++
Sbjct: 113 SHEEGLVSPGELYIGGDSHTNTTGALGAFACGLGHTDVAYVLLNGNLWFKVPETLYFKIN 172
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P++++AKDLIL+IIG+I+ G +M+F G + +S+E R+TL NM EAG KNG
Sbjct: 173 GKLPEHVMAKDLILKIIGDITTEGGAGHAMQFGGNGISDMSVESRLTLTNMTTEAGAKNG 232
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ D F YL ++ Y+ VY D+ A + Y +D+++LEPLVAKP SP N ++ +E
Sbjct: 233 IIEPDQKVFDYLSERGVTEYDAVYDDDDAQYKKTYEYDVTELEPLVAKPFSPQNVSVVQE 292
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+++D+ YIGSCTG K ED A AK+ GKKVK+ T ++PA ++
Sbjct: 293 TTGIELDKSYIGSCTGAKYEDLEAVAKIL--KGKKVKIRTEILPAAISIYKKATE----- 345
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+QIF +AG P+CGAC G A+
Sbjct: 346 ---NGLTQIFIDAGA-VVGPPTCGACCGAHMGVLAK 377
>gi|83591075|ref|YP_431084.1| 3-isopropylmalate dehydratase large subunit [Moorella thermoacetica
ATCC 39073]
gi|123523876|sp|Q2RG98.1|LEUC_MOOTA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|83573989|gb|ABC20541.1| 3-isopropylmalate dehydratase, large subunit [Moorella
thermoacetica ATCC 39073]
Length = 421
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 222/401 (55%), Gaps = 25/401 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + + PG + VD+ + +D+ P + FKK G KV+D E++
Sbjct: 3 MTITEKILAAHAGLKAVEPGQLINAKVDLALGNDITAPLAIQEFKK-LGVK-KVFDPERV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ ILRDF EQ + ++++I +G + H L +
Sbjct: 61 VLVPDHFTPAKDIKSAEQAKILRDFAREQGLTHYFEIGRMG----------IEHCLLPEA 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG++ KVP T+ F G++
Sbjct: 111 GLVGPGDLVIGADSHTCTYGALGAFATGVGSTDLAAAMATGELWFKVPETILFRYHGKLK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG I V GA Y +MEF G + LSME R T+ NM +EAGGKNG+ P
Sbjct: 171 PWVGGKDLILYTIGRIGVDGARYMAMEFTGEAITNLSMEGRFTMANMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y SD A + E D SK+EP VA PH P+N +E ++
Sbjct: 231 DEKTVEYIRGRLQRDYRIYQSDPDARYNQEIDIDASKIEPQVALPHLPENARSVKEIGEI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ ED AA++ G+KV +V ++P TQ+++
Sbjct: 291 KIDQVVIGSCTNGRLEDLRVAAQIL--KGQKVHPEVRLIVIPGTQQIYAAALA------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ F EAG ++P+CG CLGG A+ +A+
Sbjct: 342 -EGLIATFIEAGAAV-STPTCGPCLGGHMGILAKGERALAT 380
>gi|289432657|ref|YP_003462530.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides sp.
GT]
gi|288946377|gb|ADC74074.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
GT]
Length = 417
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 218/385 (56%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + K Q+SPGD + VD+++ +D+ P + FKK +KV+D +KI
Sbjct: 2 MNLVEKILAAHCGKTQVSPGDFINAKVDLVLANDITAPIAIKEFKKV--GISKVFDSKKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 60 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVP T++F G++P
Sbjct: 109 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPQTIKFNYSGKLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+ V GA Y +M F G +E LSME R T+ NM +EAGGK G+
Sbjct: 169 KWIGGKDLILYTIGQTGVDGALYSAMFFCGEAIEALSMENRFTMSNMAIEAGGKAGLFRV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISK+EP V+ PHSP N + +
Sbjct: 229 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKIEPQVSLPHSPANARPVSQIGKI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 289 KVDQVIIGSCTNGRLEDLAVSAKLLKGNVVHPDLRTIVIPGSQQVYLDALK--------A 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 341 GYIETFINAGVAV-STPTCGPCLGG 364
>gi|73748632|ref|YP_307871.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides sp.
CBDB1]
gi|73660348|emb|CAI82955.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
CBDB1]
Length = 416
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 218/385 (56%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + K Q+SPGD + VD+++ +D+ P + FKK +KV+D +KI
Sbjct: 1 MNLVEKILAAHCGKTQVSPGDFINAKVDLVLANDITAPIAIKEFKKV--GISKVFDSKKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + V ++R+F EQ I +F + G GV H+ L ++
Sbjct: 59 VFVPDHFVPNKDIASAEQVKMVREFAREQGILFF----ECGKM-------GVEHVILHEQ 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F TG+G+TD + TG+V +KVP T++F G++P
Sbjct: 108 GLVLPGDIVVGADSHTCTYGALGAFTTGMGSTDIAAAMATGEVWMKVPQTIKFNYSGKLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+ V GA Y +M F G +E LSME R T+ NM +EAGGK G+
Sbjct: 168 KWIGGKDLILYTIGQTGVDGALYSAMFFCGEAIEALSMENRFTMSNMAIEAGGKAGLFRV 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + Y +D AS+ Y FDISK+EP V+ PHSP N + +
Sbjct: 228 DEKTLEYVTPRAKRQYTVYDNDADASYAKTYNFDISKIEPQVSLPHSPANARPVSQIGKI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V IGSCT G+ ED +AK+ + + T ++P +Q+V++D
Sbjct: 288 KVDQVIIGSCTNGRLEDLAVSAKLLKGNVVHPDLRTIVIPGSQQVYLDALK--------A 339
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 340 GYIETFINAGVAV-STPTCGPCLGG 363
>gi|260437361|ref|ZP_05791177.1| 3-isopropylmalate dehydratase, large subunit [Butyrivibrio
crossotus DSM 2876]
gi|292810273|gb|EFF69478.1| 3-isopropylmalate dehydratase, large subunit [Butyrivibrio
crossotus DSM 2876]
Length = 420
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 227/393 (57%), Gaps = 21/393 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P++S G + +D+++ +D+ P I + E V+D++K
Sbjct: 2 GMTMTQKILAAHAGLPEVSAGQLIEAKLDLVLGNDITSP--VAIHEMEKMNTKTVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ + +R+F + +I ++++ ++G + H L +
Sbjct: 60 IALVPDHFVPNKDIKSAEHCMCVRNFAKKHDITNYFEVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G V++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G+
Sbjct: 110 KGLTVAGNVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGLAWFKVPSAIKFVLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGIKYLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ ++ Y +DE A + +EY D+S L+P VA PH P+N E D
Sbjct: 230 VDDLTIEYMKEHSTKEYTVYEADEDAEYDAEYVIDLSTLKPTVAFPHLPENTHTIDEGFD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ +D AA++ K + T ++PATQK+++
Sbjct: 290 IAIDQVVIGSCTNGRLDDLRIAAEILKGHKVKKGIRTIIIPATQKIYLQAIE-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F EAG ++P+CG CLGG A+
Sbjct: 342 EGLIKTFIEAGA-VVSTPTCGPCLGGYMGILAK 373
>gi|269836795|ref|YP_003319023.1| homoaconitate hydratase family protein [Sphaerobacter thermophilus
DSM 20745]
gi|269786058|gb|ACZ38201.1| homoaconitate hydratase family protein [Sphaerobacter thermophilus
DSM 20745]
Length = 418
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 216/384 (56%), Gaps = 23/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI SRA+ + ++ PG+ V VD++MT+D+ P + FKK E KV+D K+V
Sbjct: 4 TMTEKILSRAAGR-RVEPGEIAEVAVDLVMTNDITAPLAIKEFKKTGLE--KVFDPNKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+PDH++ D +A ++R+F +EQ YF ++G G+ H+ L + G
Sbjct: 61 FVPDHFVPAKDIKAAEQAKVMREFAVEQGAVYF----EVGR-------AGIEHVVLPENG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GAF FATG+G+TD + G ++VPPT++FV +G +P+
Sbjct: 110 LTLPGQVIIGGDSHTCTYGAFNAFATGMGSTDIAAAMALGTTWVRVPPTIKFVYNGTLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDLIL IG+I V GA Y MEF G ++ L M+ R+ + NM +EAG K G+ D
Sbjct: 170 GVGGKDLILYTIGQIGVDGALYAVMEFTGEVIDALDMDGRIAMANMAIEAGAKTGIFACD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T ++L T PYEPV SD A +L FD+S L+P+VA PH P N A E D+
Sbjct: 230 DKTREWLARVTDRPYEPVESDPDAEYLKVIEFDVSNLKPVVALPHLPSNVYPADEVGDMP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I +V IGSCT G+ D AK+ V ++P +Q+V +
Sbjct: 290 IHQVVIGSCTNGRISDLREVAKILKGRQVHPNVRCIVIPGSQEVAKQATR--------EG 341
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG S +CG CLGG
Sbjct: 342 LADIFLEAGAIFSTS-TCGPCLGG 364
>gi|121533305|ref|ZP_01665133.1| 3-isopropylmalate dehydratase, large subunit [Thermosinus
carboxydivorans Nor1]
gi|121307864|gb|EAX48778.1| 3-isopropylmalate dehydratase, large subunit [Thermosinus
carboxydivorans Nor1]
Length = 420
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 220/385 (57%), Gaps = 22/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI +R + + + PG + VD+++ +D+ P + F++ G V+D KI
Sbjct: 3 MTMTEKILARHAGQAAVVPGQLIRCRVDLILGNDITAPPAIQEFER-IGR--PVFDPSKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ + +R+F ++ I +++++ +G + H+ L +
Sbjct: 60 ALVPDHFAPNKDIKSAQMCKTMREFAVKHGITHYFEVGRMG----------IEHVLLPEV 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GA G FATG+G+TD + TG+ KVPP++R L G++P
Sbjct: 110 GLVAPGEVIIGADSHTCTYGALGAFATGVGSTDMAAAMATGETWFKVPPSIRVELRGQLP 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD++L +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+ P
Sbjct: 170 RWVGGKDVVLTLIGMIGVDGARYQSLEFCGEGVAALTMADRLTIANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL + YE V D AS++ ++ LEP+VA PH P+N A + +D+
Sbjct: 230 DDATIRYLSTRVERDYEAVSPDADASYVRTVVINLDDLEPVVALPHLPENVRPAAQVRDI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+V IGSCT G+ ED AA + +V ++P +Q V+++ +
Sbjct: 290 AIDQVVIGSCTNGRLEDLAQAAAILEGKTVHPRVRAIVIPGSQAVYLEAMQ--------R 341
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG ++P+CG CLGG
Sbjct: 342 GYIETFIRAGA-VVSTPTCGPCLGG 365
>gi|167044499|gb|ABZ09174.1| putative aconitase family (aconitate hydratase) [uncultured marine
crenarchaeote HF4000_APKG6J21]
Length = 423
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 226/396 (57%), Gaps = 23/396 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA----KVWD 124
M +TEKI +RAS K L PGD ++ NVD +M HDV GPG F+K + K++D
Sbjct: 1 MNITEKILARASGKDMLEPGDVIFANVDKIMLHDVSGPGVIKTFEKLEKDGVVKVDKLFD 60
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+ + DH++ + D+ + N+ L F + I +FK G+CH
Sbjct: 61 PSMVWVAEDHFVPSVDKISAENIVQLSKFTKKFGITK--------HFKYGLGQYGICHTL 112
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+EG PGE+ +G DSHT T GA G FA G+G+TD +VL G + KVP TL F ++
Sbjct: 113 SHEEGLVSPGELYIGGDSHTNTTGALGAFACGLGHTDVAYVLLNGNLWFKVPETLYFKIN 172
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P++++AKDLIL+IIG+I+ G +M+F G + +S+E R+TL NM EAG KNG
Sbjct: 173 GKLPEHVMAKDLILKIIGDITTEGGAGYAMQFGGNGISDMSVESRLTLTNMTTEAGAKNG 232
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ D F YL ++ Y+ VY D+ A + Y +D+++LEPLVAKP SP N ++ +E
Sbjct: 233 IIEPDQKVFDYLSERGVTEYDAVYDDDDAQYKKTYEYDVTELEPLVAKPFSPQNVSVVQE 292
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+++D+ YIGSCTG K ED A AK+ GKKVK+ T ++PA ++
Sbjct: 293 TTGIELDKSYIGSCTGAKYEDLEAVAKIL--KGKKVKIRTEILPAAISIYKKATE----- 345
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+QIF +AG P+CGAC G A+
Sbjct: 346 ---NGLTQIFIDAGA-VVGPPTCGACCGAHMGVLAK 377
>gi|373455345|ref|ZP_09547181.1| 3-isopropylmalate dehydratase, large subunit [Dialister
succinatiphilus YIT 11850]
gi|371934985|gb|EHO62758.1| 3-isopropylmalate dehydratase, large subunit [Dialister
succinatiphilus YIT 11850]
Length = 419
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 217/386 (56%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ + + GD ++ ++D++M +D+ P S FKK V+DREK
Sbjct: 2 GMTMTQKILAKHAGLDSVKAGDLIYCSLDLVMANDITAPPSIAAFKKV---GRPVFDREK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++PDH+ D ++ I+RDF E I ++++ +G + H L +
Sbjct: 59 IVLVPDHFQPAKDIKSAGLAKIVRDFARENGIVHYFEQGRVG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG V +G DSHTCT GA G F+TG+G+TD G + TG+ KVP +R VL G
Sbjct: 109 KGLVGPGMVTIGADSHTCTYGALGGFSTGVGSTDLGVAMATGEAWFKVPDAIRVVLTGTK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA YKS+EF G V LSM +R T+ NM +EAGGKNG+ P
Sbjct: 169 PSDITGKDVILTLIGMIGVDGALYKSLEFTGPGVSSLSMADRFTIANMAIEAGGKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E + + Y+ V +D+ A + E D+S ++P+V+ PH P+N + D
Sbjct: 229 VDEKTKTYIEGRFTKSYDVVEADDDAHYEREVVIDLSSMKPVVSFPHLPENTKVVGTFGD 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ ED AA++F +V ++PAT +++
Sbjct: 289 IPIDQVVIGSCTNGRLEDLAIAARIFEGHKVHSRVRCIVIPATPAIYLAAMH-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
F AGC ++P+CG CLGG
Sbjct: 341 AGYIDTFINAGCAV-STPTCGPCLGG 365
>gi|443327577|ref|ZP_21056199.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Xenococcus sp. PCC 7305]
gi|442792836|gb|ELS02301.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Xenococcus sp. PCC 7305]
Length = 580
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 219/387 (56%), Gaps = 20/387 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEK+ + AS + PG+ ++ VD+ M+HD F +F + FG + ++WD K+
Sbjct: 149 MTMTEKMLAAASGNDYVQPGEVIFAQVDLAMSHDAIAAPVFQLFHQYFGSDTQIWDSNKV 208
Query: 129 VIIPDHYI----FTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
V++ DH+I SD +A + + + F + N + F D+ G + G+CH+
Sbjct: 209 VLVADHFIQVNDIRSDPQAIKLYEQMVGFAHQHNCQLF-DLVSPG------EASGICHVL 261
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++G PG ++ GTDSH+CT GAFG F+TG+G TD +L TG + ++VPPT+ L
Sbjct: 262 LPEQGLIHPGMIIAGTDSHSCTYGAFGSFSTGVGTTDMANILATGDMWIRVPPTIVIELS 321
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G +P+++ AKD++L I+G+I GA K +EF G+ +E+L+++ERMTL NM VE G G
Sbjct: 322 GTLPEHISAKDIMLFILGQIGCQGAIAKVIEFRGSIIEQLAIDERMTLSNMAVECGAICG 381
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ D T KYL+DK + + D A + Y+FD+S+LEP +A P PD E
Sbjct: 382 LIAPDTITSKYLQDKNQGEFITITGDLDAEYEEIYQFDLSELEPQIACPPKPDRVVSISE 441
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+V I +IGSCTGGK D AAKV +V ++VPA+Q V L
Sbjct: 442 LPEVPITLAFIGSCTGGKLTDLAEAAKVLKNQHVAPEVNMYVVPASQLVRQQAEDL---- 497
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACL 451
IFE+AG S CGAC+
Sbjct: 498 ----GYFAIFEQAGVQILKS-GCGACI 519
>gi|390559047|ref|ZP_10243418.1| 3-isopropylmalate dehydratase large subunit [Nitrolancetus
hollandicus Lb]
gi|390174375|emb|CCF82710.1| 3-isopropylmalate dehydratase large subunit [Nitrolancetus
hollandicus Lb]
Length = 418
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 214/384 (55%), Gaps = 22/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SRA+ +P ++ G+ V V+VD++MT+D+ P S F+K E +V+D +K+V
Sbjct: 4 TMAEKILSRAAGRPSVTTGEIVEVDVDLVMTNDITAPLSISEFRKTGLE--RVFDPQKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+PDH++ D +A I+R+F EQ YF ++G G+ H+ L + G
Sbjct: 62 FVPDHFVPAKDIKAAEQAKIMREFAREQGTIYF----EIGR-------AGIEHVVLPENG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GAF F+TG+G+TD + G ++VPPT++FV GE+P+
Sbjct: 111 LTLPGQVIIGADSHTCTYGAFNAFSTGMGSTDIAAAMALGTTWVRVPPTIKFVYSGELPE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDLIL IG+I V GA Y MEF G ++ L M++R+ + NM +EAG K G+ D
Sbjct: 171 DIGGKDLILHTIGQIGVDGAHYAVMEFTGEVIDNLPMDDRIAMANMAIEAGAKTGIFAFD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +L T EPV SD A + FD+S L+PLVA PH P N A E D+
Sbjct: 231 DKTRDWLTAVTDKVLEPVSSDPDAVYQQVIEFDVSNLKPLVALPHLPSNVHAADEITDMP 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I +V IGSCT G+ D AK+ V ++P +Q+V +
Sbjct: 291 IHQVVIGSCTNGRLSDLREVAKILEGRQVHPDVRCIVIPGSQEVAKQATK--------EG 342
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG S +CG CLGG
Sbjct: 343 LADIFMDAGAIFSTS-TCGPCLGG 365
>gi|312126890|ref|YP_003991764.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|311776909|gb|ADQ06395.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
hydrothermalis 108]
Length = 429
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 236/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + +V+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + Y DISK++P VA PH P+N E +
Sbjct: 233 DEKTIEYVKHHSTKPYKIFKADEDAEYSEVYEIDISKIKPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|302872497|ref|YP_003841133.1| 3-isopropylmalate dehydratase large subunit [Caldicellulosiruptor
obsidiansis OB47]
gi|302575356|gb|ADL43147.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
obsidiansis OB47]
Length = 429
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 236/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + KV+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGVD-KVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + +I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYDITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGSFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKVRPTVAFPHLPENTKTIDEITER 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|312135783|ref|YP_004003121.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
owensensis OL]
gi|311775834|gb|ADQ05321.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
owensensis OL]
Length = 429
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 235/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + KV+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGVD-KVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGSFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|160903026|ref|YP_001568607.1| 3-isopropylmalate dehydratase, large subunit [Petrotoga mobilis
SJ95]
gi|160360670|gb|ABX32284.1| 3-isopropylmalate dehydratase, large subunit [Petrotoga mobilis
SJ95]
Length = 419
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 221/392 (56%), Gaps = 21/392 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S K ++ PG+ V VD+++ +DV P + F+K G +KV+D E+I
Sbjct: 1 MTIVEKILASHSNKSEVKPGEIVNARVDLVLGNDVTTPVAIKEFRK-IGL-SKVFDNERI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ +N ++R+F E NI +++I +G + H + ++
Sbjct: 59 AIVPDHFTPNKDIKSAQNALLIRNFAKEMNILNYFEIGKMG----------IEHCLIPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GA TG+G+TD + TG + +VP +++ V G++
Sbjct: 109 GLALPGEIVVGADSHTCTYGALNCLGTGVGSTDMAAAMATGYLWFRVPESIKIVYKGKLN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA YKS+EF G T+E LSM+ RMT+ NM +EAG K G+
Sbjct: 169 PWVSGKDLILYTIGDIGVDGALYKSIEFTGETIEDLSMDSRMTMANMAIEAGAKCGLFEY 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+++ Y PV SD AS+ +D+S +EP VA PH P+N E K +
Sbjct: 229 DEKTKEYLKERAVRDYTPVSSDPDASYEEVIEYDVSNIEPQVAFPHLPENTKPVTEAKRI 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+ IGSCT G+ ED AA V V + P TQ ++M +
Sbjct: 289 KIDQSVIGSCTNGRIEDLRIAAHVLKGHKVNSDVRCIIFPGTQDIYMQALK--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+IF EAG ++P+CG CLGG A+
Sbjct: 341 GLIEIFIEAGAAV-STPTCGPCLGGHMGVLAK 371
>gi|386811412|ref|ZP_10098638.1| 3-isopropylmalate dehydratase large subunit [planctomycete KSU-1]
gi|386406136|dbj|GAB61519.1| 3-isopropylmalate dehydratase large subunit [planctomycete KSU-1]
Length = 422
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 222/387 (57%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + S ++ PG V+ NVDI + +D+ P + F+K + KV+D EKI
Sbjct: 3 MTITEKIIAAHSNLKEVHPGQFVYANVDICLGNDITAPIAIEEFEKTGIK--KVFDPEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ + LR+F +E N+K++++I +G + H L ++
Sbjct: 61 VLVPDHFTPNKDIKSAQQSKSLREFSVEHNLKHYFEIGRMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG+G+TD TGKV LKVP +++F+ G+
Sbjct: 111 GIVAPGDLVIGADSHTCTYGALGAFSTGVGSTDLAACFATGKVWLKVPESIKFIFHGQAK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA YK+MEF G+ + LSM++R +CNM +EAG K+G++
Sbjct: 171 NWTSGKDLILYTIGKIGVDGALYKAMEFTGSAITHLSMDDRFAICNMAIEAGAKSGIISP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++ + Y SD + Y FD + + P +A P P+N + +
Sbjct: 231 DKNTEDYIKGRVGKKYTMYQSDSDCGYTKTYEFDANDISPQIALPSLPENTKPVEDVSGI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ D AA++ GKK+ + ++PATQ ++
Sbjct: 291 KIDQVVIGSCTNGRISDLRIAAQIL--KGKKIHPSIRLIIIPATQDIYRQALK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
++ +IF EA ++P+CG CLGG
Sbjct: 342 -ESLIEIFIEAEA-VVSTPTCGPCLGG 366
>gi|224541781|ref|ZP_03682320.1| hypothetical protein CATMIT_00953 [Catenibacterium mitsuokai DSM
15897]
gi|224525308|gb|EEF94413.1| 3-isopropylmalate dehydratase, large subunit [Catenibacterium
mitsuokai DSM 15897]
Length = 425
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 219/397 (55%), Gaps = 29/397 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G+ + NVDI+M +D+ GP + IFKK KV+D++K+
Sbjct: 3 MTMTQKILADHAGVKEVHAGELIEANVDIVMANDITGPMALPIFKKMAD---KVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ N +R+F EQ + + + G V H L +
Sbjct: 60 VLVPDHFTPNKDIKSAENSKAIREFSREQGLTHHMEQGKCG----------VEHAILPES 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+ ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++F L G++P
Sbjct: 110 GIVVAGDAVIGADSHTCTYGAIGAFSTGVGTTDIATGMATGQLWFKVPSAIKFNLHGKLP 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG I V GA YKSMEF G V+ LSM +R T+CNM +EAG KNG+ P
Sbjct: 170 KYVSGKDVILHIIGRIGVDGALYKSMEFTGEGVKELSMADRFTICNMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
D +YL+ Y+ +D+ A + D+S + P VA PH P N E +
Sbjct: 230 DEAAIEYLDKHAKRDYKIYEADKDAEYEEIVDVDLSAIRPTVAFPHLPGNAKTVDEIEAM 289
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
+ ID+V IGSCT G+ ED AA + GKKV V +VPATQK+++
Sbjct: 290 DKIYIDQVVIGSCTNGRMEDLRKAAAIL--KGKKVADNVRVMVVPATQKIYLQCIL---- 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F EAGC +PSCG C+GG A+
Sbjct: 344 ----EGILETFVEAGCAVN-TPSCGPCMGGHMGVLAK 375
>gi|219855237|ref|YP_002472359.1| hypothetical protein CKR_1894 [Clostridium kluyveri NBRC 12016]
gi|219568961|dbj|BAH06945.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 426
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 233/407 (57%), Gaps = 25/407 (6%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G + AMT+T+KI + + + G+ + V +D+++ +D+ P + F K G N KV
Sbjct: 3 GVIYVAMTMTQKILASHAGLDSVKSGELIKVKLDLVLGNDITTPVAINEFNK-IGSN-KV 60
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+ +EK+ I+PDH+ D ++ +R+F +++IK +++I +G + H
Sbjct: 61 FHKEKVAIVPDHFTPNKDIKSAEQCKCVREFAKDKDIKNYFEIGQMG----------IEH 110
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ ++G G+V++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++FV
Sbjct: 111 ALIPEKGLAVCGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPEAIKFV 170
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L+G++ ++ KD+IL IIG I V GA Y SMEF G V LSM++R T+ NM +EAG K
Sbjct: 171 LNGKLSPWVSGKDIILHIIGMIGVDGALYNSMEFTGEGVGELSMDDRFTIANMAIEAGAK 230
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NG+ P D T +Y+++ ++ Y +DE A ++ D+SK+ P VA PH P+N
Sbjct: 231 NGIFPVDEKTIEYVKEHSNRSYTVYEADEDAEYVKTIEIDLSKIPPTVAFPHIPENTRTI 290
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTL 420
E ++KID+V IGSCT G+ D AAKV G+KV V T + PATQ +++
Sbjct: 291 DEVGEIKIDQVVIGSCTNGRIGDLRVAAKVL--KGRKVNSNVRTIIFPATQSIYLQAMK- 347
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF E+G ++P+CG CLGG A+ +A+
Sbjct: 348 -------EGLLEIFIESGA-VVSTPTCGPCLGGHMGILAKGERAVAT 386
>gi|290968773|ref|ZP_06560310.1| 3-isopropylmalate dehydratase, large subunit [Megasphaera genomosp.
type_1 str. 28L]
gi|335049113|ref|ZP_08542123.1| 3-isopropylmalate dehydratase, large subunit [Megasphaera sp. UPII
199-6]
gi|290781069|gb|EFD93660.1| 3-isopropylmalate dehydratase, large subunit [Megasphaera genomosp.
type_1 str. 28L]
gi|333764225|gb|EGL41625.1| 3-isopropylmalate dehydratase, large subunit [Megasphaera sp. UPII
199-6]
Length = 418
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 212/386 (54%), Gaps = 24/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
MTLTEKI +R S + + PGD + VD+++ +D+ P + KEF + + V+D EK
Sbjct: 3 MTLTEKILARHSHRETVHPGDLIICEVDLVLANDITAPPAI----KEFEKIGRPVFDAEK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D ++ +RDF I+++Y++ +G + H+ L +
Sbjct: 59 IALIPDHFTPNKDIQSAALAKQVRDFSRRHRIRHYYEVGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA G FATG+G+TD G + TGK KVP +++ + G
Sbjct: 109 QGLVGPGMITVGADSHTCTYGALGGFATGVGSTDLGVAMATGKAWFKVPESIQVYVHGTK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KDLIL +IG I V GA YKS+EF G + L+M ER+T+ NM +E G KNG+ P
Sbjct: 169 SPYVTGKDLILSLIGRIGVDGALYKSLEFTGPGLSELTMSERLTIANMAIECGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +T KY D+ P+E V +D A + D+S L P+VA PH P+N
Sbjct: 229 VDDSTLKYEADRFLKPFEIVAADSDAEYCRRIDVDLSLLRPVVAFPHLPENTKPVGTFDP 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ ED AA +F +V ++P + V+ +
Sbjct: 289 IPIDQVVIGSCTNGRLEDLAQAAAIFANRSVHPEVRCIIIPGSPTVYKEALQ-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AGC A+P+CG CLGG
Sbjct: 341 AGYLETFINAGCAV-AAPTCGPCLGG 365
>gi|153954777|ref|YP_001395542.1| 3-isopropylmalate dehydratase large subunit [Clostridium kluyveri
DSM 555]
gi|189046471|sp|A5MZ75.1|LEUC_CLOK5 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|146347635|gb|EDK34171.1| LeuC [Clostridium kluyveri DSM 555]
Length = 420
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 231/402 (57%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI + + + G+ + V +D+++ +D+ P + F K G N KV+ +EK
Sbjct: 2 AMTMTQKILASHAGLDSVKSGELIKVKLDLVLGNDITTPVAINEFNK-IGSN-KVFHKEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ I+PDH+ D ++ +R+F +++IK +++I +G + H + +
Sbjct: 60 VAIVPDHFTPNKDIKSAEQCKCVREFAKDKDIKNYFEIGQMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++FVL+G++
Sbjct: 110 KGLAVCGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPEAIKFVLNGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA Y SMEF G V LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 SPWVSGKDIILHIIGMIGVDGALYNSMEFTGEGVGELSMDDRFTIANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ ++ Y +DE A ++ D+SK+ P VA PH P+N E +
Sbjct: 230 VDEKTIEYVKEHSNRSYTVYEADEDAEYVKTIEIDLSKIPPTVAFPHIPENTRTIDEVGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ D AAKV G+KV V T + PATQ +++
Sbjct: 290 IKIDQVVIGSCTNGRIGDLRVAAKVL--KGRKVNSNVRTIIFPATQSIYLQAMK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF E+G ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLLEIFIESGA-VVSTPTCGPCLGGHMGILAKGERAVAT 380
>gi|312792722|ref|YP_004025645.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179862|gb|ADQ40032.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 430
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 235/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + +V+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFTKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGSFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|294793264|ref|ZP_06758410.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp.
6_1_27]
gi|294456209|gb|EFG24573.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp.
6_1_27]
Length = 419
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 228/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDAITEEYIKGRVNRPVEPIAPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAAK+F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAKIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|167044972|gb|ABZ09637.1| putative aconitase family (aconitate hydratase) [uncultured marine
crenarchaeote HF4000_APKG8G2]
Length = 423
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 225/396 (56%), Gaps = 23/396 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA----KVWD 124
M +TEKI +R + K L PGD ++ NVD +M HDV GPG F+K + K++D
Sbjct: 1 MNITEKILARGAGKDMLEPGDVIFANVDKIMLHDVSGPGVIKTFEKLEKDGVVKVDKLFD 60
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+ + DH++ + D+ + N+ L F + I +FK G+CH
Sbjct: 61 PSMVWVAEDHFVPSVDKISAENIVQLSKFTKKFGITK--------HFKYGLGQYGICHTL 112
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+EG PGE+ +G DSHT T GA G FA G+G+TD +VL G + KVP TL F ++
Sbjct: 113 SHEEGLVSPGELYIGGDSHTNTTGALGAFACGLGHTDVAYVLLNGNLWFKVPETLYFKIN 172
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++P++++AKDLIL+IIG+I+ G +M+F G + +S+E R+TL NM EAG KNG
Sbjct: 173 GKLPEHVMAKDLILKIIGDITTEGGAGYAMQFGGNGISDMSVESRLTLTNMTTEAGAKNG 232
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
++ D F YL ++ Y+ VY D+ A + Y +D+++LEPLVAKP SP N ++ +E
Sbjct: 233 IIEPDQKVFDYLSERGVTEYDAVYDDDDAQYKKTYEYDVTELEPLVAKPFSPQNVSVVQE 292
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+++D+ YIGSCTG K ED A AK+ GKKVK+ T ++PA ++
Sbjct: 293 TTGIELDKSYIGSCTGAKYEDLEAVAKIL--KGKKVKIRTEILPAAISIYKKATE----- 345
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+QIF +AG P+CGAC G A+
Sbjct: 346 ---NGLTQIFIDAGA-VVGPPTCGACCGAHMGVLAK 377
>gi|344997086|ref|YP_004799429.1| 3-isopropylmalate dehydratase large subunit [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965305|gb|AEM74452.1| 3-isopropylmalate dehydratase large subunit [Caldicellulosiruptor
lactoaceticus 6A]
Length = 430
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 234/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + +V+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGSFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYTIFKADEDAEYSEVFEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|282165661|ref|YP_003358046.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
gi|282157975|dbj|BAI63063.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
Length = 425
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 225/395 (56%), Gaps = 29/395 (7%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENA 120
+ N +T+TEKIFSRAS +P + GD V ++D MTHD+ GP G + I + E +
Sbjct: 1 MSNDLTITEKIFSRASGRP-VKAGDFVMASIDRAMTHDITGPLAVEGFYEIMRDE--KEK 57
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
KVWD KI+I+ DH + A +N +LR F +Q IK+FYD+ ++G+
Sbjct: 58 KVWDPGKIIILFDHQVPADSLNAAKNHILLRKFAKDQKIKHFYDL-----------HEGI 106
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH + ++GH PG++++G+DSHTC GA G F TGIG+TD V G++ +VP T+R
Sbjct: 107 CHQVMPEKGHVLPGQLVVGSDSHTCAYGAVGAFGTGIGSTDMAAVFALGRLWFRVPETIR 166
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
F +DG++ D + +KD+IL++IG++ GA YK+ E+ G + L M +RMT+ NM +E G
Sbjct: 167 FEVDGKLGDRVYSKDIILKLIGDVGADGARYKACEYAGDAIRSLDMSQRMTISNMAIEMG 226
Query: 301 GKNGVVPADGTTFKYLEDKT-SLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDN 358
GK G++ D TT Y+ ++ + +K + SE R +D +LEP VA PH+ DN
Sbjct: 227 GKAGIIEPDRTTEAYVRQRSKGFKLDRGLKSDKGAEYSEVREYDAGELEPQVACPHNVDN 286
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+ + KID+V++GSCT G+ ED AA+V V ++PA+ +M V
Sbjct: 287 VVDVGKVEGKKIDQVFLGSCTNGRFEDLKTAAEVMDGRPVAKGVRMIVIPASHTEYMKVL 346
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F AG SP CG C+GG
Sbjct: 347 KAGL--------VEEFMNAGA-LVESPCCGPCMGG 372
>gi|312137186|ref|YP_004004523.1| 3-isopropylmalate dehydratase large subunit [Methanothermus
fervidus DSM 2088]
gi|311224905|gb|ADP77761.1| 3-isopropylmalate dehydratase, large subunit [Methanothermus
fervidus DSM 2088]
Length = 412
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 232/419 (55%), Gaps = 43/419 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M LTEKI ++A+ K ++SPG+ + VNVD+ MTHD P + FKK + KVWD ++I
Sbjct: 1 MNLTEKILAKAANKKEVSPGEIIKVNVDLAMTHDGTTPPTIKSFKKI---SNKVWDPDRI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH + ++ A + ++F EQ IK FY+ +G+CH L ++
Sbjct: 58 VIVYDHNVPPNNIGAAEFQKVTQNFVKEQGIKNFYN-----------HGEGICHQVLPEK 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG V++G DSHTCT GAFG F+TG+G TD + TGK L VP + ++G +
Sbjct: 107 GFVFPGMVIIGADSHTCTYGAFGAFSTGVGATDMAVIFATGKTWLLVPESYLIEINGSLN 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ AKD+IL+IIG+I GA YKS+EF G T+ ++++ RMT+CNMVVE G KNG++
Sbjct: 167 KYVTAKDVILKIIGKIKAKGAVYKSIEFKGETIYKMNVSGRMTMCNMVVEMGAKNGIMVP 226
Query: 309 DGTTFKYLE--DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+ T KYL K+ Y+P D+ A + E+ FD+S + P VA PH+ DN + +
Sbjct: 227 NKKTIKYLRKFKKSFRIYKP---DKDAEYEKEFYFDVSNMGPQVACPHNVDNVKPVYKVE 283
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ ++GSCT G+ ED AA++ V +VPA++ V+M
Sbjct: 284 GKHIDQAFLGSCTNGRIEDLRIAAEILKDGKIHEDVRMIVVPASKDVYMKAVK------- 336
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLCL 470
+ + F +AG +P CG CLG GPK+ RM +P + + L
Sbjct: 337 -EGIIETFIKAGAIV-CNPGCGPCLGAHMGVLGPKEVCISTSNRNFKGRMGDPTSKIYL 393
>gi|333986802|ref|YP_004519409.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
SWAN-1]
gi|333824946|gb|AEG17608.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium sp.
SWAN-1]
Length = 414
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 216/388 (55%), Gaps = 31/388 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI ++AS K ++SPG+ + NVD+ ++HD P + F+K VWD EKI
Sbjct: 1 MNITEKILAKASMKDEVSPGEIIQANVDLALSHDGTSPPTINTFRKIADH---VWDNEKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH I + + + R+F EQ IK + +G+CH L +
Sbjct: 58 VIVFDHNIPANTIGSAEFQKVTREFAREQGIKNLF-----------THGEGICHQVLPEN 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG V++G DSHTCT GAFG FATG+G TD V TGK VP + ++DG++
Sbjct: 107 GFIKPGTVVVGADSHTCTYGAFGAFATGMGATDMAVVFATGKTWFMVPEAYKVIVDGKLG 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ AKD+IL +I +I GATYKS+EF G T++ +++ RMT+CNM +E+G KNG++
Sbjct: 167 RYVTAKDVILNVISKIGSFGATYKSLEFHGETIDSMNVAGRMTMCNMAIESGAKNGIIEP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ T +YL+++ ++ + SD + + EY FD++ +EP +A PH+ DN + +
Sbjct: 227 NKATMEYLKERNVKSFDIMVSDSDSQYEKEYLFDVNDMEPQIACPHNVDNVKPISKVEGT 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV----PG 424
ID+ +IGSCT G+ ED AA+V S V ++PA+ +++ + G
Sbjct: 287 TIDQAFIGSCTNGRLEDLQIAAEVLDGSRVHEDVRLIVIPASAEIYRKAMHEGIIDTFIG 346
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+G C +P CG CLG
Sbjct: 347 AGAIVC-------------NPGCGPCLG 361
>gi|288819199|ref|YP_003433547.1| 3-isopropylmalate dehydratase large subunit [Hydrogenobacter
thermophilus TK-6]
gi|384129944|ref|YP_005512557.1| homoaconitate hydratase family protein [Hydrogenobacter
thermophilus TK-6]
gi|288788599|dbj|BAI70346.1| 3-isopropylmalate dehydratase large subunit [Hydrogenobacter
thermophilus TK-6]
gi|308752781|gb|ADO46264.1| homoaconitate hydratase family protein [Hydrogenobacter
thermophilus TK-6]
Length = 428
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 223/387 (57%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K ++ PG+ + VD+ M +DV P + +K + KV+D +K+
Sbjct: 3 MTITEKILADHAGKREVYPGELITAKVDLAMANDVTAPLAIKTLEKYSID--KVFDPDKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ H++ D ++ ++R+F + NIK+F+ + +G+ H L ++
Sbjct: 61 ALVLSHFVPAKDIKSAEQAKMVREFARKHNIKWFFQ-----------EGEGIEHTILPEQ 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + L TG++ LKVP +++F+ G++
Sbjct: 110 GIVVPGDLVIGADSHTCTYGGIGAFATGVGSTDLAYALATGEIWLKVPESMKFIFYGKLQ 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G + LS+E+R+T+ NM +EAGGK+G++
Sbjct: 170 PWVTGKDLILHTIGQIGVDGALYRAMEFEGEAIRDLSVEQRLTIANMAIEAGGKSGIIAP 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + P++ SD A ++ Y +D K+EPLVA P+ P N E +
Sbjct: 230 DEKTLEYVSQRAKKPWKIYNSDPDAHYVEVYEWDAGKIEPLVAWPYLPSNVHPVSESTHI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ +IGSCT G+ ED AA V GKKV V ++PA++ V+
Sbjct: 290 TIDQAFIGSCTNGRIEDLRLAASVL--KGKKVHPYVRCIVIPASKNVYHQALH------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAGC S +CG CLGG
Sbjct: 341 -EGLIDIFTEAGCIVSVS-TCGPCLGG 365
>gi|296131904|ref|YP_003639151.1| 3-isopropylmalate dehydratase large subunit [Thermincola potens JR]
gi|296030482|gb|ADG81250.1| 3-isopropylmalate dehydratase, large subunit [Thermincola potens
JR]
Length = 421
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 230/403 (57%), Gaps = 26/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + K ++ PG+ + VD+++ +D+ P + F+K E V+D+++
Sbjct: 2 GMTITEKILAAHCGKDKVVPGELINCKVDVVLGNDITAPVAIKEFEKIGVET--VFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDH+ D ++ ++RDF + I ++++ +G + H L +
Sbjct: 60 VVLVPDHFTPNKDIKSAEQAKLIRDFARKHKITNYFEVGKVG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG+V++G DSHTCT GA G F+TGIG+TD + TG+V KVP +++FV G +
Sbjct: 110 QGIVGPGDVVIGADSHTCTYGALGAFSTGIGSTDMAAAMATGEVWFKVPESIKFVFYGDQ 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ KDLIL +IG+I V GA YK+MEF G + LSM+ R T+ NM +EAGGKNG++
Sbjct: 170 LNPWVSGKDLILYVIGQIGVDGALYKAMEFTGPAIRNLSMDSRFTMANMAIEAGGKNGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y++ +T PY SD A + + Y +D+ +EP VA PH P+N +
Sbjct: 230 EPDDITLEYVKGRTKRPYTLYTSDPDAEYFAVYEYDVKDIEPQVAFPHLPENTKPISQVG 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
V+ID+V IGSCT G+ ED AA+V G+KV +V + P TQ+++
Sbjct: 290 HVEIDQVVIGSCTNGRMEDLRIAARVL--KGRKVHDRVRAIVFPGTQQIYKQAMQ----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +A ++P+CG CLGG A+ +A+
Sbjct: 343 ---EGLFDIFIDANVAI-STPTCGPCLGGHMGILAKGERAIAT 381
>gi|289548615|ref|YP_003473603.1| homoaconitate hydratase family protein [Thermocrinis albus DSM
14484]
gi|289182232|gb|ADC89476.1| homoaconitate hydratase family protein [Thermocrinis albus DSM
14484]
Length = 429
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 224/387 (57%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI ++ + K ++ PG+ V VD++M +DV P + + +K +G + +V+D E+I
Sbjct: 3 MTITEKIIAKHAGKKEVYPGELVTAKVDLVMANDVTAPLAIKVLEK-YGID-RVFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ H++ D ++ I+R+F + IK+F+ + +G+ H L +E
Sbjct: 61 ALVLSHFVPAKDIKSAEQAKIVREFVKKHGIKWFFQ-----------EGEGIEHALLPEE 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG+G+TD + + TG+ LKVP +++F+ G+
Sbjct: 110 GLVVPGDLVVGADSHTCTYGALGAFSTGMGSTDIAYAIATGETWLKVPESMKFIFYGKPK 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KD IL IG+I V GA Y++MEF G + LSM++R T+ NM VEAG KNG++
Sbjct: 170 RWVMGKDFILYTIGQIGVDGALYRAMEFEGEAIRALSMDQRFTITNMAVEAGAKNGIIAP 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + +E SD A ++ Y +D K+EP+VA P P N E +
Sbjct: 230 DEKTIEYVSQRAKKEWEVYTSDPDAHYVEIYEWDAGKIEPVVAWPFLPSNVHPVTESTHI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ +IGSCT G+ ED AA V GKKV V ++PA++KV+M
Sbjct: 290 TIDQAFIGSCTNGRLEDLRIAAAVL--KGKKVHPYVRCIVIPASKKVYMQALK------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAGC S +CG CLGG
Sbjct: 341 -EGLIDIFMEAGCVVSVS-TCGPCLGG 365
>gi|73669462|ref|YP_305477.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina barkeri
str. Fusaro]
gi|72396624|gb|AAZ70897.1| 3-isopropylmalate dehydratase, large subunit [Methanosarcina
barkeri str. Fusaro]
Length = 413
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 216/383 (56%), Gaps = 25/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFSRA+ + D V +VD M HD + FK+ E KVWD +IV
Sbjct: 3 TISEKIFSRAT-GAEAKANDFVLADVDYAMAHDGTSVLAVNAFKEM--EMKKVWDPSRIV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH ++E + +R++ EQ I FY++ + G+CH L + G
Sbjct: 60 IPFDHIAPANNEISATLQKEIREWVKEQGIPNFYELGE-----------GICHQVLPENG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+CT GAFG FATG+G TD + TGK+ KVP + RF ++G +
Sbjct: 109 FALPGKLVVGADSHSCTYGAFGAFATGVGATDMAEIFATGKLWFKVPESFRFTVEGRLGK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL L +IG+ + GATYK++EF G + LS+ RMTLCNM +E G K G+VP D
Sbjct: 169 GVYAKDLTLYLIGKTGIDGATYKAVEFYGQAISELSVSGRMTLCNMAIEMGAKTGIVPPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF +L+++ + PY+PVY+D+ A ++ E + +EP VA PH DN E +
Sbjct: 229 EKTFAFLKNRAAAPYDPVYADQDAVYVKEPVYSAEDIEPQVACPHQVDNVKPVGEVEGTH 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+V+IG+CT G+ ED AA + GKKV V T ++PA++ +
Sbjct: 289 IDQVFIGTCTNGRLEDLEVAAAIL--KGKKVAVRTIVIPASRTTLLAAIE--------NG 338
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
+I +AG T A+P CG CLG
Sbjct: 339 TMEILLKAGI-TLATPGCGPCLG 360
>gi|186682766|ref|YP_001865962.1| homoaconitate hydratase family protein [Nostoc punctiforme PCC
73102]
gi|186465218|gb|ACC81019.1| homoaconitate hydratase family protein [Nostoc punctiforme PCC
73102]
Length = 569
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 222/391 (56%), Gaps = 28/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHD-VCGPGSFGIFKKEFGENAKVWDREK 127
MTL EK+ AS + PG+ V+ VD+ ++HD V GP + F K++GE K+WD +K
Sbjct: 145 MTLVEKLLGLASRNSYVQPGEVVFAQVDLALSHDAVAGPVA-QTFYKQYGEGTKLWDSQK 203
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKY-------FYDIKDLGNFKANPDYKGV 180
+V++ DH+I +D RA+ ++ EQ I++ +D+ G + G+
Sbjct: 204 VVLVADHFIQINDIRADDKAYLM----YEQMIEFAKFQGCHLFDVVSPG------EATGI 253
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH+ L ++G RPG ++ GTDSHTCT GA G F+TG+G TD + TG + +++PPTL
Sbjct: 254 CHVLLPEKGFVRPGMIIAGTDSHTCTYGALGAFSTGVGTTDMANIYATGDMWIRIPPTLV 313
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
F L G +P + AKD+IL I+G+I AGAT K MEF G+ + +L +ER+TL NM VE G
Sbjct: 314 FELSGTLPPKISAKDIILFILGQIGCAGATSKVMEFRGSILAQLPFDERLTLANMAVECG 373
Query: 301 GKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA 360
G++ D T +YL+++ S ++ + D A + Y+FD+S LEP VA+P PD
Sbjct: 374 AICGLIVPDEVTREYLKNRVSEEFQEIIGDADAEYERVYQFDLSSLEPQVARPPKPDRVV 433
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTL 420
+ +++ I + +IGSCTGGK D AA+V V F+VPAT ++ L
Sbjct: 434 AISQLENIPITKAFIGSCTGGKLYDLAQAAEVLKGRQLADGVNLFIVPATIEIREQAQEL 493
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
IFE+AG + CGAC+
Sbjct: 494 --------GYIDIFEQAGAQILKT-GCGACI 515
>gi|195952894|ref|YP_002121184.1| 3-isopropylmalate dehydratase large subunit [Hydrogenobaculum sp.
Y04AAS1]
gi|226735973|sp|B4U7U5.1|LEUC_HYDS0 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|195932506|gb|ACG57206.1| homoaconitate hydratase family protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 424
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 225/393 (57%), Gaps = 26/393 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI + + K ++ PG+ V +D+ M +DV P S +K E KV+D++KI
Sbjct: 4 TITEKIIADHAGKKEVFPGELVTAKIDLAMANDVTAPLSIKTLEKYGIE--KVFDKDKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ H++ D ++ I+RDF + NIK+F+ + +G+ H L + G
Sbjct: 62 LVLSHFVPAKDIKSAEQAKIVRDFAKKHNIKWFFG-----------EGEGIEHTLLPENG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT G G F+TG+G+TD + + TG++ LKVP +++F+ G++
Sbjct: 111 IVVPGDLVVGADSHTCTYGGIGAFSTGVGSTDLAYAMATGEIWLKVPESMKFIFYGKLNK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL IG+I V GA Y++MEF G + L + +R+T+ NM +EAGGK+G++ D
Sbjct: 171 WVSGKDLILYTIGQIGVDGALYRAMEFDGEAIRSLDVSQRLTIANMAIEAGGKSGIISPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y+E + PY+ SD+ A ++ Y +D S +EP+VA P+ P N E +
Sbjct: 231 EKTIEYVEKRAKKPYKIYQSDKDAHYVEVYEWDASSIEPMVAWPYLPSNVHPVSESTHIT 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ ED AA + GKKV T ++PA++ V++
Sbjct: 291 IDQAFIGSCTNGRIEDLRIAASIL--KGKKVHPYTRCVVIPASKNVYLQALH-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ IF EAGC S +CG CLGG A+
Sbjct: 341 EGLVDIFIEAGCAVSTS-TCGPCLGGHMGILAK 372
>gi|222530068|ref|YP_002573950.1| 3-isopropylmalate dehydratase large subunit [Caldicellulosiruptor
bescii DSM 6725]
gi|254808560|sp|B9MLV4.1|LEUC_ANATD RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|222456915|gb|ACM61177.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
bescii DSM 6725]
Length = 429
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 235/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + +V+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++F+L G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFILYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGFIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|313894136|ref|ZP_07827702.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. oral
taxon 158 str. F0412]
gi|313441700|gb|EFR60126.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. oral
taxon 158 str. F0412]
Length = 419
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 229/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMIIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGDGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDAVTEEYIKGRVNRPVEPIAPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQALK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +A C ++P+CG CLGG
Sbjct: 342 ----EGLLDIFIQADCAV-STPTCGPCLGG 366
>gi|294794706|ref|ZP_06759841.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp.
3_1_44]
gi|294454068|gb|EFG22442.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp.
3_1_44]
Length = 419
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 228/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A++ D+SKL+P+VA PH P N E
Sbjct: 228 PYDAITEEYIKGRVNRPVEPITPDSDAAYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGHKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|238019775|ref|ZP_04600201.1| hypothetical protein VEIDISOL_01650 [Veillonella dispar ATCC 17748]
gi|237863299|gb|EEP64589.1| hypothetical protein VEIDISOL_01650 [Veillonella dispar ATCC 17748]
Length = 419
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 228/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGDGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDAVTEEYIKGRVNRPVEPIAPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|452943717|ref|YP_007499882.1| homoaconitate hydratase family protein [Hydrogenobaculum sp. HO]
gi|452882135|gb|AGG14839.1| homoaconitate hydratase family protein [Hydrogenobaculum sp. HO]
Length = 424
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 225/393 (57%), Gaps = 26/393 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI + + K ++ PG+ V +D+ M +DV P S +K E KV+D++KI
Sbjct: 4 TITEKIIADHAGKKEVFPGELVTAKIDLAMANDVTAPLSIKTLEKYGIE--KVFDKDKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ H++ D ++ I+RDF + NIK+F+ + +G+ H L + G
Sbjct: 62 LVLSHFVPAKDIKSAEQAKIVRDFAKKHNIKWFFG-----------EGEGIEHTLLPENG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT G G F+TG+G+TD + + TG++ LKVP +++F+ G++
Sbjct: 111 IVVPGDLVVGADSHTCTYGGIGAFSTGVGSTDLAYAIATGEIWLKVPESMKFIFYGKLNK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL IG+I V GA Y++MEF G + L + +R+T+ NM +EAGGK+G++ D
Sbjct: 171 WVSGKDLILYTIGQIGVDGALYRAMEFDGEAIRSLDISQRLTIANMAIEAGGKSGIISPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y+E + PY+ SD+ A ++ Y +D S +EP+VA P+ P N E +
Sbjct: 231 EKTIEYVEKRAKKPYKIYQSDKDAHYVEVYEWDASSIEPMVAWPYLPSNVHPVSESTHIT 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ ED AA + GKKV T ++PA++ V++
Sbjct: 291 IDQAFIGSCTNGRIEDLRIAASIL--KGKKVHPYTRCIVIPASKNVYLQALH-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ IF EAGC S +CG CLGG A+
Sbjct: 341 EGLIDIFIEAGCAVSTS-TCGPCLGGHMGILAK 372
>gi|20091903|ref|NP_617978.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina
acetivorans C2A]
gi|22001711|sp|Q8TLF1.1|LEUC1_METAC RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|19917100|gb|AAM06458.1| 3-isopropylmalate dehydratase, large subunit [Methanosarcina
acetivorans C2A]
Length = 424
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 216/383 (56%), Gaps = 25/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFSRA+ + D V +VD M HD + FK+ E KVWD +IV
Sbjct: 14 TISEKIFSRAA-GTEAKANDFVLADVDYAMAHDGTSVLAVNAFKEM--EMEKVWDPSRIV 70
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH ++E + +R++ EQ I FY++ + G+CH L + G
Sbjct: 71 VPFDHIAPANNETSATLQREIREWVKEQGIPNFYEVGE-----------GICHQVLPENG 119
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+CT GAFG FATG+G TD + TGK+ KVP + R ++G +
Sbjct: 120 FALPGKLVVGADSHSCTYGAFGAFATGVGATDMAEIFATGKLWFKVPESFRMTVEGSLRK 179
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL L +IG+ +AGATYK++EF G + L++ RMTLCNM +E G K G+VP D
Sbjct: 180 GVYAKDLTLYLIGKTGIAGATYKAVEFYGQAIRELTVAGRMTLCNMAIEMGAKTGIVPPD 239
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF++L+++ + YEPVY+D A +L E+ +D +EP VA PH DN E +
Sbjct: 240 EKTFEFLKNRAAATYEPVYADPDAVYLEEFTYDADDIEPQVACPHQVDNVKPVGEVEGTH 299
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V+IG+CT G+ ED AA V GK+V V T ++PA++ +
Sbjct: 300 VDQVFIGTCTNGRLEDLEVAAAVL--KGKQVAVRTIVIPASRTTLLAAIE--------NG 349
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
+ +AG T A+P CG CLG
Sbjct: 350 TMETLLKAGV-TLATPGCGPCLG 371
>gi|34556978|ref|NP_906793.1| 3-isopropylmalate dehydratase large subunit [Wolinella succinogenes
DSM 1740]
gi|39931693|sp|Q7M9Z9.1|LEUC_WOLSU RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|34482693|emb|CAE09693.1| 3-ISOPROPYLMALATE DEHYDRATASE, LARGE SUBUNIT [Wolinella
succinogenes]
Length = 422
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 232/390 (59%), Gaps = 30/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKIFS + K Q+S G+ + +D+++ +D+ P S F++ K+ + +
Sbjct: 4 TLTEKIFSAHTNK-QVSAGEIIESPIDMVIGNDITTPLSIRAFEESGA--TKLANPDGFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + +K+++D +D+G + H L ++G
Sbjct: 61 IVMDHFIPAKDIASANQARISRDFAKKHQLKHYFDERDMG----------IEHAILPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD + + TGK KVPP++R V G++ +
Sbjct: 111 LVLPGDVIIGADSHTCTHGALGAFATGMGSTDLAYAMITGKNWFKVPPSIRVVFKGKLQE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G T+E+LSM++R +LCNM +EAG KNG++ AD
Sbjct: 171 HVYGKDLILEIIRQIGVDGALYKALEFQGDTIEQLSMDDRFSLCNMAIEAGAKNGIIAAD 230
Query: 310 GTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L + SL EP Y +D A + D+ KLEP++A P P N +++++ K
Sbjct: 231 SITKEFLASRKSLRAEPKYYQADADALYEQTIEIDVEKLEPVIAYPFLPSNGKSISQAVK 290
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D+KID+ +IGSCT G+ D AA++ GK+V V + P TQ+++ D +
Sbjct: 291 DDLKIDQAFIGSCTNGRLSDLRIAAQIL--KGKRVHPDVRLIITPGTQQIYKDAHQ---- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ EAG ++P+CGACLGG
Sbjct: 345 ----EGLIDTLLEAGA-LISNPTCGACLGG 369
>gi|327400713|ref|YP_004341552.1| 3-isopropylmalate dehydratase large subunit [Archaeoglobus
veneficus SNP6]
gi|327316221|gb|AEA46837.1| 3-isopropylmalate dehydratase large subunit [Archaeoglobus
veneficus SNP6]
Length = 418
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 217/385 (56%), Gaps = 25/385 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SRA+ K + GD V ++D M HD+ P + F++ GE+AKVWD +I+
Sbjct: 4 TIAEKILSRAAGK-DVKAGDYVLADIDRAMVHDITAPLAIKAFREIAGESAKVWDPSRII 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + A +LR F EQNI YD+ ++G+ H + ++G
Sbjct: 63 MAFDHQVPADSVTAAETHKMLRKFAEEQNI-LNYDV-----------HEGIAHQIMVEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H +PGE+++G DSHTC GA G FATGIG+TD GFV TGK+ +VP T+RF ++G++
Sbjct: 111 HAKPGELIVGADSHTCMYGALGCFATGIGSTDMGFVFATGKLWFRVPETIRFEVNGKLEK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ +KD+IL++IG + GA YK+ E+ G V ++SM +R+T+ NM +E GGK G++ D
Sbjct: 171 HVYSKDIILKLIGMVGSDGANYKACEYAGDVVRKMSMAQRLTMSNMAIEMGGKAGIIEPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T KYL +E ++ DE A D++ +EP VAKPH DN E K K
Sbjct: 231 DETRKYLRAIGVEDFEEIHGDEDAE-AKTVELDVTGMEPQVAKPHRVDNVVGVSEVKGTK 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+V+IGSCT G+ ED AA+ FL K K V ++PA++ +
Sbjct: 290 VDQVFIGSCTNGRYEDLKIAAE-FLKGEKIAKNVRLIVIPASRAEYRKALK--------D 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
IF EAG P CG C+GG
Sbjct: 341 GLIDIFVEAG-GIVEFPCCGPCMGG 364
>gi|410722031|ref|ZP_11361347.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410597928|gb|EKQ52532.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 414
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 209/384 (54%), Gaps = 23/384 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI + ASE ++ PG+ + VD+ MTHD P + F K E VWD +KI
Sbjct: 1 MNITEKILANASEAKEVQPGEIIEAQVDLAMTHDGTSPPTINTFNKIADE---VWDPDKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH + ++ + I RDF +Q IK FY +G+CH L +E
Sbjct: 58 VLVYDHNLPANNIGSAEFQRITRDFARKQGIKNFY-----------AHGEGICHQVLPEE 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG+V++G DSHTCT GAFG FATG+G TD V TGK VP L+ +DG +
Sbjct: 107 GFIKPGKVVVGADSHTCTYGAFGAFATGMGATDMAVVYATGKTWFMVPGALKIEVDGILT 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKDLIL IIG I GATYKS+EF G TV+ + + RMT+CNM VE+G KNG++
Sbjct: 167 ENVTAKDLILHIIGSIGSYGATYKSLEFCGNTVQNMDVSGRMTMCNMAVESGAKNGIMEP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ KYL+D+ ++ SDE + + + F + +EP VA PH+ DN +
Sbjct: 227 NPAILKYLKDRNVSDFQIFTSDEDSVYEKSHYFQVDDMEPQVACPHNVDNVHPVSKVSGE 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+ +IGSCT G+ ED AA V V + PA+++++ +
Sbjct: 287 TIDQAFIGSCTNGRLEDLRMAAHVLENEKVHPDVRLIVSPASRRIYQSAI--------AE 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
+ F EAG +P CG CLG
Sbjct: 339 GIIETFLEAGA-IVINPGCGPCLG 361
>gi|255524088|ref|ZP_05391049.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
carboxidivorans P7]
gi|296188456|ref|ZP_06856844.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
carboxidivorans P7]
gi|255512225|gb|EET88504.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
carboxidivorans P7]
gi|296046720|gb|EFG86166.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
carboxidivorans P7]
Length = 421
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 228/402 (56%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDR 125
AMT+T+KI + + + PG + V +D+++ +D+ P + KEF + KV+D+
Sbjct: 2 AMTMTQKILAAHAGVESVKPGQLIKVKLDLVLGNDITTPVAI----KEFDKIGVKKVFDK 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
+KI I+PDH+ D ++ R+F + I+ ++++ +G + H +
Sbjct: 58 KKIAIVPDHFTPNKDIKSAEQCKCTREFACKMEIENYFEVGQMG----------IEHALI 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G G+V++G DSHTCT GA G F+TGIG+TD G + TG+ KVP ++FVL G
Sbjct: 108 PEKGLAVCGDVIIGADSHTCTYGALGAFSTGIGSTDMGAGMATGEAWFKVPEAIKFVLKG 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+M ++ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 168 KMAPWVSGKDVILHIIGMIGVDGALYKSMEYTGEGLKNLSMDDRFTMANMAIEAGAKNGI 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T +Y+++ ++ Y +DE A + D+S + P VA PH P+N E
Sbjct: 228 FEVDDKTIEYVKEHSNREYTVYTADEDAEYSKVIEIDLSSIRPTVAFPHLPENTRTIDEV 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+V ID+ IGSCT G+ ED AAAKVF + +V + PATQK++++
Sbjct: 288 GEVFIDQAVIGSCTNGRIEDLRAAAKVFKGNKVNKRVRAIIFPATQKIYLEALR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF EAG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLLEIFIEAGA-VVSTPTCGPCLGGHMGILAKGERAIAT 380
>gi|312621636|ref|YP_004023249.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202103|gb|ADQ45430.1| 3-isopropylmalate dehydratase, large subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 429
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 234/402 (58%), Gaps = 26/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + K + PGD ++ NVD+++ +DV P + F+K G + +V+D++KI
Sbjct: 5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKI 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ + ++R+F + I ++++ ++G + H L ++
Sbjct: 63 AIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEK 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++F+L G+
Sbjct: 113 GLVVPGDLVIGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFILYGKKT 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 173 GWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAKNGIFEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++ ++ PY+ +DE A + + DISK+ P VA PH P+N E +
Sbjct: 233 DEKTIEYVKQHSTKPYKIFKADEDAEYSQVFEIDISKIRPTVAFPHLPENTKTIDEITEK 292
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ ED AAK+ G+KVK + + P TQ ++
Sbjct: 293 IYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPTTQNIYKQALK------ 344
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AGC ++P+CG CLGG A + +A+
Sbjct: 345 --EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILADGEKALAT 383
>gi|416999790|ref|ZP_11940210.1| 3-isopropylmalate dehydratase, large subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|333976596|gb|EGL77463.1| 3-isopropylmalate dehydratase, large subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 419
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 227/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + +D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECQLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDAITEEYIKGRVNRPVEPITPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|410668305|ref|YP_006920676.1| 3-isopropylmalate dehydratase large subunit [Thermacetogenium
phaeum DSM 12270]
gi|409106052|gb|AFV12177.1| 3-isopropylmalate dehydratase large subunit LeuC [Thermacetogenium
phaeum DSM 12270]
Length = 422
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 229/403 (56%), Gaps = 29/403 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MT+TEKI + + + ++ PG+ V +D+ + +D+ P + KEF +V+D E
Sbjct: 1 MTITEKILAAHAGEERVEPGELVNCRLDLTLANDITAP----VAIKEFARLGLDRVFDPE 56
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++V++PDH+ D ++ ++R+F E I ++++ +G + H L
Sbjct: 57 RVVLVPDHFTPNKDIKSAEQCRLIREFAREFGITNYFEVGRMG----------IEHCLLP 106
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG++++G DSHTCT GA G FATG+G+TD + G+ KVP +++F+ G
Sbjct: 107 EQGLVLPGDLVIGADSHTCTYGALGAFATGVGSTDLAAGMALGECWFKVPESMKFIYHGR 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ KDLIL IG+I V GA Y++MEF G + LS+E R+T+CNM +EAG KNG+V
Sbjct: 167 LQPWVGGKDLILYTIGDIGVDGARYRAMEFTGEAISSLSVEGRLTMCNMAIEAGAKNGIV 226
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T Y+E + Y SD A ++ +D S +EP VA PH P+N E +
Sbjct: 227 PPDEKTVAYVEKRAKREYRLYDSDPDARYVEVREYDASSIEPQVAFPHLPENARPVSEAQ 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
++ID+V IGSCT G+ ED AAK+ +GKKV ++ ++P TQ++++
Sbjct: 287 GIEIDQVVIGSCTNGRIEDLRVAAKIL--AGKKVHQRLRVVIIPGTQEIYLQALR----- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ ++F EAG ++P+CG CLGG AR +++
Sbjct: 340 ---EGLLEVFVEAGAAV-STPTCGPCLGGHMGILARGERALST 378
>gi|435853033|ref|YP_007314352.1| 3-isopropylmalate dehydratase, large subunit [Halobacteroides
halobius DSM 5150]
gi|433669444|gb|AGB40259.1| 3-isopropylmalate dehydratase, large subunit [Halobacteroides
halobius DSM 5150]
Length = 420
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 225/400 (56%), Gaps = 21/400 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI + + K ++ PG+ V VD+++ +DV P + F K G N +V+D+++
Sbjct: 2 GMTMVEKILAAHAGKDKVKPGELVNAKVDLVLGNDVTTPVAVKEFNK-IGVN-EVFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ I+PDH+ D + ++R+F + I +++I ++G + H L +
Sbjct: 60 VAIVPDHFAPNKDINSAEQCKMIRNFAHNKEITNYFEIGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT GA G TG+G+TD + +G+ KVP T++FV +G++
Sbjct: 110 KGLALPGDIIIGADSHTCTYGALGALGTGVGSTDMAAGMASGEAWFKVPETIKFVYNGDL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D++ KDLIL IG+I V GA YK+MEF G +E SM RMT+ NM +EAGGK G++
Sbjct: 170 QDWVSGKDLILYTIGDIGVDGALYKAMEFSGEVIEDFSMANRMTMSNMAIEAGGKCGLIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++D+ Y SDE A++ +D+S++EP VA PH P+N E +D
Sbjct: 230 PDKKTLEYVKDRAQRDYTVYKSDEDANYDQVIEYDVSEIEPQVAFPHLPENTKGISEVED 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+ IGSCT G+ ED AA++ K + + P TQ+++
Sbjct: 290 IAIDQAVIGSCTNGRLEDLRVAAEILEGKKKAEHLRLIIFPGTQEIYRQAMK-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 EGLIDIFLDAGAAV-STPTCGPCLGGHMGILAKGERAIAT 380
>gi|21226511|ref|NP_632433.1| 3-isopropylmalate dehydratase large subunit [Methanosarcina mazei
Go1]
gi|31563183|sp|Q8PZT3.1|LEUC1_METMA RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|20904779|gb|AAM30105.1| 3-isopropylmalate dehydratase [Methanosarcina mazei Go1]
Length = 391
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 24/359 (6%)
Query: 94 NVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDF 153
+VD M HD + FK+ E +VWD +IVI DH + E + +R++
Sbjct: 4 DVDYAMAHDGTSILAVNAFKEM--EMERVWDPSRIVIPFDHIAPANTETSATLQKEIREW 61
Query: 154 CMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQF 213
EQ+I FY+I + G+CH L + G PG++L+G DSH+CT GAFG F
Sbjct: 62 VREQSIPNFYEIGE-----------GICHQVLPENGFALPGKLLVGADSHSCTYGAFGAF 110
Query: 214 ATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKS 273
ATG+G TD + TGK+ KVP + R ++G + ++ AKDL L +IG+ +AGATYK+
Sbjct: 111 ATGVGATDMAEIFATGKLWFKVPESFRMTVEGSLDKHVYAKDLTLYLIGKTGIAGATYKA 170
Query: 274 MEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKA 333
+EF G + LS+ RMTLCNM +E G K G+VP D TF +L+++ PYEPVYSD A
Sbjct: 171 VEFYGQAISELSVAGRMTLCNMAIEMGAKTGIVPPDEKTFDFLKNRAVAPYEPVYSDPDA 230
Query: 334 SFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF 393
S+L E+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V
Sbjct: 231 SYLKEFVYDAGDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAASVL 290
Query: 394 LASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
GKKV V T ++PA++ + +I +AG T A+P CG CLG
Sbjct: 291 --KGKKVTVRTIIIPASRSTLLAAIK--------NGTMEILLKAGV-TLATPGCGPCLG 338
>gi|220927585|ref|YP_002504494.1| 3-isopropylmalate dehydratase large subunit [Clostridium
cellulolyticum H10]
gi|219997913|gb|ACL74514.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
cellulolyticum H10]
Length = 419
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 224/402 (55%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + +L PG + +D+++ +D+ P + F K G + KV+D+ K
Sbjct: 2 GMTMTQKILASHAGVDKLVPGQLIMAKLDMVLGNDITSPVAIKEFDK-IGLD-KVFDKNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D ++ V + R+F I F+++ +G V H L +
Sbjct: 60 IAIVPDHFTPNKDIKSAEQVKVCREFSKRMGIVNFFEVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+
Sbjct: 110 KGLVVPGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKAWFKVPEAIKFVLRGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G V LSM++R ++ NM +EAG KNG+
Sbjct: 170 QKWVGGKDIILHIIGMIGVDGALYKSMEFTGDGVNALSMDDRFSMANMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + Y +DE A + Y D+++++P VA PH P+N D
Sbjct: 230 VDEKTVEYVKEHSIRHYTVYKADEDAEYSEVYEIDLAEVKPTVAFPHLPENARTIDNVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA V G+KV V ++PATQK+W
Sbjct: 290 IKIDQVVIGSCTNGRIEDMRIAAGVL--KGRKVSDNVRCIIIPATQKIWKQAMN------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLFDIFIDAGAAV-STPTCGPCLGGHMGILAKGERAVAT 380
>gi|18977310|ref|NP_578667.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus furiosus
DSM 3638]
gi|22001718|sp|Q8U2A1.1|LEUC1_PYRFU RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|18892983|gb|AAL81062.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus furiosus
DSM 3638]
Length = 424
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 224/391 (57%), Gaps = 27/391 (6%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
MT+ EKI + + K ++ PG+ V VD + +DV P + F+K E KV+D E
Sbjct: 2 GGMTIAEKILATHAGKEEVKPGEIVLAKVDFMFGNDVTTPLAIKTFRKIGVE--KVFDPE 59
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+I I+ DH+ D +A R+F EQ IK+F++ ++G V H L
Sbjct: 60 RIAIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFEGGNVG----------VEHCLLP 109
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G PGE+++G DSHTCT GA G FATG+G+TD + TG+ +VP T++FV +G+
Sbjct: 110 ELGLVLPGELIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGD 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ +KDLIL IG+I V GA YK MEF G +E+LS+E+RMT+ NM +EAG K G++
Sbjct: 170 LQPWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LAREC 365
D T +Y++ + Y+ SDE A + +D+SK+EP VA PH P+N +++
Sbjct: 230 EPDKKTIEYVKGRAKREYKIYKSDEDAKYYKVIEYDVSKIEPQVAFPHLPENTVPISKAA 289
Query: 366 K-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
K ++KID+V IGSCT G+ ED AA+V G+KV V ++P + V+
Sbjct: 290 KMNIKIDQVVIGSCTNGRLEDLRMAAEVL--EGQKVAPWVRLIILPCSPTVYFKAMK--- 344
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG P+CG CLGG
Sbjct: 345 -----EGLLEIFLEAGA-VIGPPTCGPCLGG 369
>gi|397651442|ref|YP_006492023.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus furiosus
COM1]
gi|393189033|gb|AFN03731.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus furiosus
COM1]
Length = 421
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 224/389 (57%), Gaps = 27/389 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + K ++ PG+ V VD + +DV P + F+K E KV+D E+I
Sbjct: 1 MTIAEKILATHAGKEEVKPGEIVLAKVDFMFGNDVTTPLAIKTFRKIGVE--KVFDPERI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+ D +A R+F EQ IK+F++ GN GV H L +
Sbjct: 59 AIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFE---GGNV-------GVEHCLLPEL 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GA G FATG+G+TD + TG+ +VP T++FV +G++
Sbjct: 109 GLVLPGELIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGDLQ 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ +KDLIL IG+I V GA YK MEF G +E+LS+E+RMT+ NM +EAG K G++
Sbjct: 169 PWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGIIEP 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK- 366
D T +Y++ + Y+ SDE A + +D+SK+EP VA PH P+N +++ K
Sbjct: 229 DKKTIEYVKGRAKREYKIYKSDEDAKYYKVIEYDVSKIEPQVAFPHLPENTVPISKAAKM 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
++KID+V IGSCT G+ ED AA+V G+KV V ++P + V+
Sbjct: 289 NIKIDQVVIGSCTNGRLEDLRMAAEVL--EGQKVAPWVRLIILPCSPTVYFKAMK----- 341
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG P+CG CLGG
Sbjct: 342 ---EGLLEIFLEAGA-VIGPPTCGPCLGG 366
>gi|169351728|ref|ZP_02868666.1| hypothetical protein CLOSPI_02509 [Clostridium spiroforme DSM 1552]
gi|169291950|gb|EDS74083.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
spiroforme DSM 1552]
Length = 424
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 223/398 (56%), Gaps = 29/398 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI + + ++ G + +D++M +D+ GP + IF++ KV+D++K
Sbjct: 2 AMTMTQKILADHAGMESVTAGQLIEAKLDVVMANDITGPMALPIFRQM---ADKVFDKDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDH+ D ++ N + DF EQ + Y + G V H L +
Sbjct: 59 VVLVPDHFTPNKDIKSAENSKAILDFSNEQGLTYHMEQGKCG----------VEHAILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G GE ++G DSHTC+ GA G F+TG+G TD + TG++ KVP ++F+L G+
Sbjct: 109 MGIVVAGECIIGADSHTCSYGALGAFSTGVGTTDIATGMATGELWFKVPEAIKFILTGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL II +I V GA YKSMEFVG ++ L+M++R T+CNM +EAG KNG+ P
Sbjct: 169 SKYVSGKDIILHIINKIGVDGALYKSMEFVGDGIQYLTMDDRFTICNMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E+ + Y+ +DE A + D+SK+ P VA PH P N E +
Sbjct: 229 VDDQTIAYMEEHSKKDYKVYTADEDAEYERVIEIDLSKVRPTVAFPHLPGNGHTIDEIEA 288
Query: 368 VK---IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
++ ID+V IGSCT G+ D AA + GKKV V +VPATQK+++
Sbjct: 289 MEPIYIDQVVIGSCTNGRISDLRKAAAIL--KGKKVARNVRVMVVPATQKIFLQCIV--- 343
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 344 -----EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 375
>gi|282849437|ref|ZP_06258822.1| 3-isopropylmalate dehydratase, large subunit [Veillonella parvula
ATCC 17745]
gi|282581141|gb|EFB86539.1| 3-isopropylmalate dehydratase, large subunit [Veillonella parvula
ATCC 17745]
Length = 419
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 229/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N +
Sbjct: 228 PYDAITEEYIKGRVNRPVEPITPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINKID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +A C ++P+CG CLGG
Sbjct: 342 ----EGLLDIFIQADCAV-STPTCGPCLGG 366
>gi|374851612|dbj|BAL54567.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[uncultured Aquificae bacterium]
gi|374853455|dbj|BAL56363.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[uncultured Aquificae bacterium]
Length = 428
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 222/387 (57%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + K ++ PG+ + VD+ M +DV P + +K + K++D K+
Sbjct: 3 MTITEKILADHAGKREVYPGELITAKVDLAMANDVTAPLAIKTLEKYSID--KIFDPNKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ H++ D ++ ++R++ + NIK+F+ + +G+ H L ++
Sbjct: 61 ALVLSHFVPAKDIKSAEQAKMVREYARKHNIKWFFQ-----------EGEGIEHTILPEQ 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + L TG++ LKVP +++F+ G++
Sbjct: 110 GIVVPGDLVVGADSHTCTYGGIGAFATGVGSTDLAYALATGEIWLKVPESMKFIFYGKLQ 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G + LS+E+R+T+ NM +EAGGK+G++
Sbjct: 170 PWVTGKDLILHTIGQIGVDGALYRAMEFEGEAIRDLSVEQRLTIANMAIEAGGKSGIIAP 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + P++ SD A ++ Y +D K+EPLVA P+ P N E +
Sbjct: 230 DEKTLEYVSQRAKKPWKIYSSDPDAHYVEVYEWDAGKIEPLVAWPYLPSNVHPVSESTHI 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ +IGSCT G+ ED AA V GKKV V ++PA++ V+
Sbjct: 290 TIDQAFIGSCTNGRIEDLRLAASVL--KGKKVHPYVRCIVIPASKNVYHQALH------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAGC S +CG CLGG
Sbjct: 341 -EGLIDIFTEAGCIVSVS-TCGPCLGG 365
>gi|225570210|ref|ZP_03779235.1| hypothetical protein CLOHYLEM_06306 [Clostridium hylemonae DSM
15053]
gi|225161005|gb|EEG73624.1| hypothetical protein CLOHYLEM_06306 [Clostridium hylemonae DSM
15053]
Length = 417
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 215/386 (55%), Gaps = 28/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPG-SFGIFKKEFGENAKVWDREKI 128
T+ EKI +RA+++P++ PGD VW +VD M D+ GP KE G+ VW+ +K+
Sbjct: 4 TIAEKIIARAAKEPEVRPGDIVWADVDRAMMDDILGPRIQIAEQLKELGK--PVWNPDKV 61
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DHY + V R++ + I+ +Y+ ++G CH +A+
Sbjct: 62 VIISDHYTPPASIHQAEIVKFTREWAADNGIQKYYE------------FEGPCHQVMAET 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G+ RPG V+LGTDSHTC GA FA+G+G+T+ +L TGK LKVP T+R + +GE+
Sbjct: 110 GNVRPGMVVLGTDSHTCMGGALNAFASGVGSTEMLGILVTGKTWLKVPETVRVLWEGELS 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++AKD+ L+ IG + AGATY S+E+ G T+ L ++ERM + NM VE G K G++P
Sbjct: 170 ANVMAKDISLRTIGTVGHAGATYMSVEYDGQTIRGLPVDERMAITNMAVEMGAKAGLMPF 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL+ YEP SD ASF Y+F +L P VA PH D A +DV
Sbjct: 230 DDITEAYLDSIGVKDYEPYQSDADASFYRTYQFRAEELRPQVACPHEVDRVTEADNVRDV 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KI + Y+GSCTGG+ D AA GKKV V + PA++ +W + +G
Sbjct: 290 KIQQAYLGSCTGGRLHDLKTAAAYL--KGKKVAPGVRLLISPASRSIWRE--------AG 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
I EAG +P+CG C+G
Sbjct: 340 RLGYLDILAEAG-GVIMAPTCGVCVG 364
>gi|337287200|ref|YP_004626673.1| 3-isopropylmalate dehydratase, large subunit [Thermodesulfatator
indicus DSM 15286]
gi|335360028|gb|AEH45709.1| 3-isopropylmalate dehydratase, large subunit [Thermodesulfatator
indicus DSM 15286]
Length = 423
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 224/405 (55%), Gaps = 25/405 (6%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
+K MTL EK+ + + P++ PG + VD+ + +D+ P + IF++ +KV+D
Sbjct: 1 MKRPMTLAEKLLAAKAGLPEVEPGQLIDCPVDLALANDITAPIAIKIFRE--AGFSKVFD 58
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
R KI+++ DH+ D ++ V + R+F EQ I ++Y+ GN G+ H+
Sbjct: 59 RNKIILVMDHFTPNKDIQSAEQVRLCREFAREQGIVHYYE---GGNC-------GIEHVL 108
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L ++G PG+V++G DSHTCT GA G FATG+G+TD TG+ +VP +++FV
Sbjct: 109 LPEKGLVVPGDVVIGADSHTCTYGALGTFATGMGSTDVAAAWITGRTWFRVPESIKFVYR 168
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
GE+ ++ KDLIL IG+I V GA YK+MEF G ++RLSM ER T+ NM +EAG K G
Sbjct: 169 GELKPWVTGKDLILYTIGDIGVDGALYKAMEFTGEVIKRLSMAERFTMSNMAIEAGAKVG 228
Query: 305 VVPADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
++ D T Y+ + EPV +D KA +L +D SK+EP VA PH P N
Sbjct: 229 LIAPDKKTLSYVRKHSH--REPVVFKADRKAKYLDVIEYDCSKIEPQVAFPHLPSNTKPI 286
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + ID+V IGSCT G+ ED AAK+ V ++P + KV+ +
Sbjct: 287 SEVGHIDIDQVVIGSCTNGRIEDLAVAAKILAGRQVNPNVRAIIIPGSPKVYREALR--- 343
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
K IF EAG + P+CG CLGG A+ + +++
Sbjct: 344 -----KKYIDIFVEAGAIV-SPPTCGPCLGGHMGILAKGEKAIST 382
>gi|376259499|ref|YP_005146219.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
BNL1100]
gi|373943493|gb|AEY64414.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
BNL1100]
Length = 419
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 226/402 (56%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ PG + +D+++ +D+ P + F K G + KV+D+ K
Sbjct: 2 GMTMTQKILANHAGADKVVPGQLIKAKLDMVLGNDITSPVAIKEFDK-IGLD-KVFDKNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D ++ V + R+F I F+++ +G V H L +
Sbjct: 60 IAIVPDHFTPNKDIKSAEQVKVCREFSKRMEIVNFFEVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++FVL G+
Sbjct: 110 KGLVVPGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGEAWFKVPEAIKFVLKGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G V LSM++R ++ NM +EAG KNG+
Sbjct: 170 QKWVGGKDVILHIIGMIGVDGALYKSMEFTGDGVNALSMDDRFSMANMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + Y +DE A + Y D+++++P VA PH P+N + D
Sbjct: 230 VDEKTVEYVKEHSIRSYSIYKADEDAEYSEVYEIDLAEIKPTVAFPHLPENARTIDKVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA+V GKKV V ++PATQK+W
Sbjct: 290 IKIDQVVIGSCTNGRIEDMRIAAEVL--KGKKVSDNVRCIIIPATQKIWKQAMN------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF ++G ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLFDIFIDSGAAV-STPTCGPCLGGHMGILAKGERAVAT 380
>gi|319937755|ref|ZP_08012158.1| 3-isopropylmalate dehydratase [Coprobacillus sp. 29_1]
gi|319807190|gb|EFW03804.1| 3-isopropylmalate dehydratase [Coprobacillus sp. 29_1]
Length = 429
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 224/403 (55%), Gaps = 29/403 (7%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G V +MT+T+KI + + Q+ G + +D++M +D+ GP + IFK+ E V
Sbjct: 3 GEVIMSMTMTQKILADHAGLKQVVAGQLIEAKLDVVMANDITGPMALPIFKQMANE---V 59
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+D++K++++PDH+ D ++ N +R+F + Q + + + G V H
Sbjct: 60 FDKDKVILVPDHFTPNKDIKSAENSKAIREFSLNQCLTHHMEQGKCG----------VEH 109
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L ++G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FV
Sbjct: 110 AILPEKGIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIQFV 169
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L G++ Y+ KD+IL IIG+I V GA YKSMEF G V LSM++R T+CNM +EAG K
Sbjct: 170 LKGKLQPYVSGKDVILHIIGKIGVDGALYKSMEFTGEGVAELSMDDRFTICNMAIEAGAK 229
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NG+ P D T Y++ + Y+ +D+ A + D+S + P VA PH P N
Sbjct: 230 NGIFPVDNQTRDYMKKHSKKEYKEYIADKDAVYDEVIEIDLSSIVPTVAFPHLPGNAHTM 289
Query: 363 RECKD---VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
E + + ID+V IGSCT G+ D AA + GK+V V +VPATQK+++
Sbjct: 290 DEINNEEKIMIDQVVIGSCTNGRMSDLRKAAAIL--KGKQVAHHVRVMVVPATQKIFVQC 347
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 348 IQ--------EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 381
>gi|406981285|gb|EKE02781.1| hypothetical protein ACD_20C00333G0002 [uncultured bacterium]
Length = 421
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 225/386 (58%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + ++SPGD + VDI + +D+ GP + F K E KV+D ++
Sbjct: 4 GMTITEKILADHAGLDKVSPGDLITAKVDITLANDITGPVAIEEFLKTGVE--KVFDAQR 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V +PDH+ D ++ +N ++R+F +Q +++++++ LG + H L
Sbjct: 62 VVFVPDHFTPNKDIKSAQNAKMIREFAKKQGLRHYFEVGRLG----------IEHTLLPD 111
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG++++G DSHTCT GA G F+TG+G+TD + +G+ KVP T++ + G++
Sbjct: 112 NGIVGPGDLVIGADSHTCTYGAIGAFSTGVGSTDLACAMASGETWFKVPETIKVIYKGKL 171
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDL+L +IG+I V GA YKS+E G VE L +++R T+CNM +EAG KNG++P
Sbjct: 172 NKWVGGKDLVLHLIGDIGVDGALYKSLEITGPAVESLPIDDRFTICNMAIEAGAKNGIIP 231
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++++T PY+ SD+ A++ +++ +EP+VA PH P+N + +
Sbjct: 232 PDKITEEYVKNRTLRPYKFYQSDDNANYSRVIEYNVEDIEPVVAFPHLPENTKPISQVGN 291
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+ IGSCT G+ D AA++ V ++P TQ+++++ L
Sbjct: 292 IKIDQAVIGSCTNGRISDLKIAAELLKDRKIHPDVRLIVLPGTQEIYLEAMKL------- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
I + G + +P+CG CLGG
Sbjct: 345 GYAEAIVKAGGVFS--TPTCGPCLGG 368
>gi|310657729|ref|YP_003935450.1| 3-isopropylmalate isomerase subunit, dehydratase component
[[Clostridium] sticklandii]
gi|308824507|emb|CBH20545.1| 3-isopropylmalate isomerase subunit, dehydratase component
[[Clostridium] sticklandii]
Length = 422
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 226/390 (57%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN--AKVWDR 125
MT+T+KI + + + + G+ + V +DI+M +D+ + + EF ++V+D+
Sbjct: 2 GMTMTQKILADHAGRKYVEAGELIKVKLDIVMGNDI----TTAVAIPEFNNTGASEVFDK 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
EK+VI+ DH+ D +A + R+F E++I +FYD+ D+G + H+ L
Sbjct: 58 EKVVIVLDHFTPNKDIKAAEQCKVCREFAYEKDIVHFYDVGDVG----------IEHVIL 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G PGEV++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F L G
Sbjct: 108 PEKGIVAPGEVIIGADSHTCTYGALGAFSTGIGSTDMAVGMATGEAWFKVPSAIKFNLTG 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ ++ KD+IL IIG I V GA Y+SMEF G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 168 SLSKHVSGKDVILHIIGMIGVDGALYQSMEFTGDGIKSLSMDDRFTIANMAIEAGAKNGI 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
P D T Y++ ++ PY+ +DE A++ Y ++S + P +A PH P+N E
Sbjct: 228 FPFDEQTKDYIDIHSTKPYKIYEADEDANYEKIYNINLSSIRPTIAFPHLPENTVTIDEA 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
+++ID+V IGSCT G+ D A + GKKV +V T ++P +QKV+++
Sbjct: 288 DEIEIDQVVIGSCTNGRLSDMKITADIL--RGKKVNKRVRTIIIPGSQKVYLECIK---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
++ F AG + P+CG CLGG
Sbjct: 342 ----AGYAEDFINAGA-IFSMPTCGPCLGG 366
>gi|326202888|ref|ZP_08192755.1| homoaconitate hydratase family protein [Clostridium papyrosolvens
DSM 2782]
gi|325986965|gb|EGD47794.1| homoaconitate hydratase family protein [Clostridium papyrosolvens
DSM 2782]
Length = 419
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 226/402 (56%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ PG + +D+++ +D+ P + F K G + KV+D+ K
Sbjct: 2 GMTMTQKILANHAGIDKVVPGQLIKAKLDMVLGNDITSPVAIKEFNK-IGLD-KVFDKNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D ++ V + R+F + I F+++ +G V H L +
Sbjct: 60 IAIVPDHFTPNKDIKSAEQVKLCREFSKKMEIVNFFEVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++FVL G+
Sbjct: 110 RGLVVPGDVIIGADSHTCTYGALGAFSTGIGSTDMAAGMATGEAWFKVPEAIKFVLKGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G V LSM++R ++ NM +EAG KNG+
Sbjct: 170 QKWVGGKDVILHIIGMIGVDGALYKSMEFTGDGVNALSMDDRFSMANMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + Y +DE A + Y D+++++P VA PH P+N + D
Sbjct: 230 VDEKTVEYVKEHSIRSYTVYKADEDAQYSEVYEIDLAEIKPTVAFPHLPENARTIDKVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA++ G+KV V ++PATQK+W
Sbjct: 290 IKIDQVVIGSCTNGRIEDMRIAAQIL--KGQKVSDNVRCIIIPATQKIWKQAMN------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +A+
Sbjct: 342 --EGLFDIFIDAGAAV-STPTCGPCLGGHMGILAKGERAVAT 380
>gi|319788717|ref|YP_004090032.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus albus 7]
gi|315450584|gb|ADU24146.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus albus 7]
Length = 420
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 227/388 (58%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI + + ++ G + ++D+++ +DV P + F K + +++++K
Sbjct: 2 AMTMTQKILAAHAGLDEVKAGQLIMADLDLVLGNDVTTPVAINEFNKAGFDG--IFNKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D +A + R+F + +I ++YD+ D+G + H L +
Sbjct: 60 ITMVMDHFTPNKDIKAAQQCKQCREFASKYDITHYYDVGDVG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+ ++G DSHTCT GA G F+TG+G+TD + GK KVP ++F + G++
Sbjct: 110 KGLVVPGDAVIGADSHTCTYGALGAFSTGVGSTDMCAGMAAGKTWFKVPSAIKFNIVGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y AKD+IL IIG I V GA Y+SMEF+G ++ L+ME+R+ + NM +EAG KNG+
Sbjct: 170 PKYSAAKDVILHIIGMIGVDGALYRSMEFMGEGLKNLTMEDRLCMANMAIEAGAKNGIFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+ +T Y+ +D A + EY D+S+++P VA PH P+N + D
Sbjct: 230 VDEVTKEYLKGRTDREYKVYEADPDAEYDEEYTIDLSQIKPTVAFPHLPENARTFDDIPD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AAA++ GK+V V ++PATQ +++
Sbjct: 290 IKIDQVVIGSCTNGRIEDLRAAAEIL--KGKRVADHVRCIVIPATQHIYLTAMK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF E+GC A P+CG CLGG
Sbjct: 342 --EGLLEIFIESGCAVSA-PTCGPCLGG 366
>gi|89894115|ref|YP_517602.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
hafniense Y51]
gi|219668514|ref|YP_002458949.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
hafniense DCB-2]
gi|423076794|ref|ZP_17065502.1| 3-isopropylmalate dehydratase, large subunit [Desulfitobacterium
hafniense DP7]
gi|89333563|dbj|BAE83158.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538774|gb|ACL20513.1| 3-isopropylmalate dehydratase, large subunit [Desulfitobacterium
hafniense DCB-2]
gi|361852170|gb|EHL04440.1| 3-isopropylmalate dehydratase, large subunit [Desulfitobacterium
hafniense DP7]
Length = 424
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 226/403 (56%), Gaps = 26/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+TEKI + + ++ PG + +D+ + +D+ GP S F+K FG VWD+ K
Sbjct: 5 AMTITEKILAEHAGLDKVVPGQLITAQLDLALANDITGPVSIREFEK-FGVET-VWDKTK 62
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + LR+F +Q I ++++ +G V H L +
Sbjct: 63 VALVPDHFTPNKDIASAELSKALREFAKKQGIVHYWEQGRVG----------VEHCLLPE 112
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG+V++G DSHTCT GA G FATG+G+TD + TG+ ++P +++F+ G
Sbjct: 113 QGVTLPGDVIIGADSHTCTYGALGAFATGVGSTDLAAGMATGEAWFRIPESIKFIFKGTN 172
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KDLIL IG+I V GA Y+SMEF G + LSM+ R+T+CNM VEAG KNG++
Sbjct: 173 FQPWVSGKDLILYTIGKIGVDGARYRSMEFTGEGIAALSMDGRLTMCNMAVEAGAKNGII 232
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T Y+ ++ PY+ +SD A ++ Y +D++ + VA PH P+N E K
Sbjct: 233 PPDEKTLAYVNERAKRPYKVYHSDPDAQYVEVYEWDVADIPLQVAFPHLPENAKPVSEGK 292
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+KID+V IGSCT G+ ED AA++ G+KV V ++P TQ ++
Sbjct: 293 GIKIDQVVIGSCTNGRLEDMQVAAQIL--KGQKVHGDVRLIVIPGTQDIYKQAMQ----- 345
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +++
Sbjct: 346 ---EGLIDIFIDAGA-VVSTPTCGPCLGGYMGILAKGERALST 384
>gi|414076303|ref|YP_006995621.1| 3-isopropylmalate dehydratase large subunit [Anabaena sp. 90]
gi|413969719|gb|AFW93808.1| 3-isopropylmalate dehydratase large subunit [Anabaena sp. 90]
Length = 571
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 229/412 (55%), Gaps = 27/412 (6%)
Query: 50 MAPQQSERR------PATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDV 103
+ P +RR PA+ S + MTL EK+ +++S ++PG+ V+ VD+ ++HD
Sbjct: 121 LIPFNQKRRQGKITIPASATSPR-PMTLVEKLLAKSSGNTYVTPGEVVFAQVDLALSHDA 179
Query: 104 CGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRD----FCMEQNI 159
IF K +GE+AK+WD +++V++ DH+I +D R + +++ F +Q
Sbjct: 180 VASPVAKIFYKHYGEDAKLWDAQRVVLVADHFIQVNDIRVDHKAELMYQQMVQFAKDQEC 239
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
Y +D+ G + G+CH+ L ++G RPG ++ GTDSHTCT GA G F+TG+G
Sbjct: 240 -YLFDVVSPG------EAAGICHVLLPEKGFVRPGMIIAGTDSHTCTYGALGAFSTGVGT 292
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
TD + G + ++VP TL F L G +P ++ AKD+IL I+G+I AGAT K MEF G+
Sbjct: 293 TDMANIYAMGDMWIRVPSTLVFDLSGTLPHHISAKDIILFILGQIGCAGATGKVMEFRGS 352
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEY 339
+ +L +ER+TL NM +E G G++ D TT Y+ +++ + + +D A + Y
Sbjct: 353 ILAQLPFDERLTLANMAIECGAVCGLIVPDETTRNYVRSRSTQGFVEMIADPDAEYEKVY 412
Query: 340 RFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKK 399
+FD+S LEP VA+P PD + ++ I + +IGSCTGGK D AA+V
Sbjct: 413 QFDLSNLEPQVARPPKPDQVIPISQLEETPITKAFIGSCTGGKLYDLAQAAEVLQGRQLA 472
Query: 400 VKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
V F+VPA+ ++ L +IF +AG S CGAC+
Sbjct: 473 DGVSLFVVPASVEIREQAEAL--------GYLEIFAQAGAQILKS-GCGACI 515
>gi|375086977|ref|ZP_09733368.1| 3-isopropylmalate dehydratase, large subunit [Megamonas funiformis
YIT 11815]
gi|374563476|gb|EHR34790.1| 3-isopropylmalate dehydratase, large subunit [Megamonas funiformis
YIT 11815]
Length = 420
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 219/386 (56%), Gaps = 25/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
MT+TEKI ++ + + PG + +D+++ +DV P + KEF + K V+D K
Sbjct: 3 MTMTEKILAKHAGIDVVKPGQLINCKLDMVLANDVTAPPAI----KEFEKIGKPVFDNTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ I+RDF + NI +++I +G + H+ L +
Sbjct: 59 IALVPDHFTPNKDIKSAGLAKIVRDFAHKHNIVNYFEIGRVG----------IEHVILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG V +G DSHTCT GA G F+TG+G+TD G L TG+ KVP T++ + G+
Sbjct: 109 KGIVAPGMVTIGADSHTCTYGALGGFSTGVGSTDLGVALATGEAWFKVPETIKVNITGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y+ KD++L +IG I V GA YK++EF G V+ L+M +R+T+ NM +EAG KNG+ P
Sbjct: 169 PKYICGKDVMLTLIGMIGVDGALYKALEFAGEGVKELNMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++D+ + PYE V +D A++ ++S+L+P+VA PH P+N K+
Sbjct: 229 VDDETLNYIKDRVTKPYEIVEADSDATYCQTVEINLSELKPVVAFPHLPENTHTVESIKE 288
Query: 368 -VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ ID+V IGSCT G+ ED AA + V ++P +Q+V++D
Sbjct: 289 PITIDQVVIGSCTNGRLEDLAIAASILKGHKVHPNVRCIIIPGSQQVYLDAIH------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
F EAG ++P+CG CLG
Sbjct: 342 -NGYVDTFIEAGAAV-STPTCGPCLG 365
>gi|269797164|ref|YP_003311064.1| 3-isopropylmalate dehydratase large subunit [Veillonella parvula
DSM 2008]
gi|269093793|gb|ACZ23784.1| 3-isopropylmalate dehydratase, large subunit [Veillonella parvula
DSM 2008]
Length = 419
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 226/390 (57%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK + + + PG + +D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMAHHAGLDVVKPGQIIECQLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDAITEEYIKGRVNRPVEPIAPDADAVYAQTITIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|408381753|ref|ZP_11179301.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium
formicicum DSM 3637]
gi|407815684|gb|EKF86254.1| 3-isopropylmalate dehydratase large subunit [Methanobacterium
formicicum DSM 3637]
Length = 414
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 208/384 (54%), Gaps = 23/384 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI + AS ++ PG+ + VD+ MTHD P + F K KVWD +KI
Sbjct: 1 MNITEKILANASGAKEVQPGEIIEAEVDLAMTHDGTSPPTINTFNKIAD---KVWDPDKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH + ++ + I RDF +Q IK FY +G+CH L +E
Sbjct: 58 VLVYDHNLPANNIGSAEFQRITRDFARKQGIKKFYS-----------HGEGICHQVLPEE 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG V++G DSHTCT GAFG FATG+G TD V TGK VP L+ +DG +
Sbjct: 107 GLIKPGMVVVGADSHTCTYGAFGAFATGMGATDMAVVYATGKTWFMVPGALKIEVDGILT 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKDLIL IIGEI GATYKS+EF G TV+ + + RMT+CNM VE+G KNG++
Sbjct: 167 ENVTAKDLILHIIGEIGSYGATYKSLEFCGNTVQNMDVSGRMTMCNMAVESGAKNGIMEP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ KYL+++ ++ SDE + + + F + LEP VA PH+ DN +
Sbjct: 227 NPAILKYLKERNVTDFQIFTSDEDSVYEKSHYFQVDDLEPQVACPHNVDNVHPVSKVSGE 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+ +IGSCT G+ ED AA V V + PA+++++ +
Sbjct: 287 TIDQAFIGSCTNGRLEDLRMAAHVLENEKVHPDVRLIVSPASRRIYQSAI--------AE 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
+ F EAG +P CG CLG
Sbjct: 339 GIVETFLEAGA-IIINPGCGPCLG 361
>gi|429760472|ref|ZP_19292943.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
KON]
gi|429177304|gb|EKY18637.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
KON]
Length = 419
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 227/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGKIGVDGARYMALEFAGDGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDEITEAYIKGRVNRPVEPINPDPDAVYAQTVTIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|172046598|sp|Q24XT4.2|LEUC_DESHY RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
Length = 421
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 226/403 (56%), Gaps = 26/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+TEKI + + ++ PG + +D+ + +D+ GP S F+K FG VWD+ K
Sbjct: 2 AMTITEKILAEHAGLDKVVPGQLITAQLDLALANDITGPVSIREFEK-FGVET-VWDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + LR+F +Q I ++++ +G V H L +
Sbjct: 60 VALVPDHFTPNKDIASAELSKALREFAKKQGIVHYWEQGRVG----------VEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG+V++G DSHTCT GA G FATG+G+TD + TG+ ++P +++F+ G
Sbjct: 110 QGVTLPGDVIIGADSHTCTYGALGAFATGVGSTDLAAGMATGEAWFRIPESIKFIFKGTN 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KDLIL IG+I V GA Y+SMEF G + LSM+ R+T+CNM VEAG KNG++
Sbjct: 170 FQPWVSGKDLILYTIGKIGVDGARYRSMEFTGEGIAALSMDGRLTMCNMAVEAGAKNGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T Y+ ++ PY+ +SD A ++ Y +D++ + VA PH P+N E K
Sbjct: 230 PPDEKTLAYVNERAKRPYKVYHSDPDAQYVEVYEWDVADIPLQVAFPHLPENAKPVSEGK 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+KID+V IGSCT G+ ED AA++ G+KV V ++P TQ ++
Sbjct: 290 GIKIDQVVIGSCTNGRLEDMQVAAQIL--KGQKVHGDVRLIVIPGTQDIYKQAMQ----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +++
Sbjct: 343 ---EGLIDIFIDAGA-VVSTPTCGPCLGGYMGILAKGERALST 381
>gi|303229955|ref|ZP_07316729.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|302515321|gb|EFL57289.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 419
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 227/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGKIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T Y++ + + P EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDKITEAYIKGRVNRPVEPINPDPDAVYAQTVTIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV + ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFIRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|432328931|ref|YP_007247075.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135640|gb|AGB04909.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Aciduliprofundum sp.
MAR08-339]
Length = 419
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 217/393 (55%), Gaps = 28/393 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + K ++ G+ V VD+ M D GP S + KK E KV+D+ +
Sbjct: 4 TMAEKIIGEHAGK-EVKAGEIVVAKVDVAMVQDGTGPLSVDVLKKMGME--KVFDKNNTI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + ILR+F E+ Y D+ + GVCH L E
Sbjct: 61 LFLDHATPSPRKELSNAHKILRNFS-EKTGAYLSDVGE-----------GVCHQRLV-ES 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT+GA G FATG+G+TD GKV L+VP T F + GE P
Sbjct: 108 WASPGQLIVGADSHTCTSGALGAFATGMGSTDVAIAFALGKVWLRVPETHLFRITGEFPK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL IIG I GATYK+MEFVG T++R+SME R T+ NM +EAGGK G++P D
Sbjct: 168 GVYSKDLILHIIGTIGADGATYKAMEFVGPTIDRMSMESRFTITNMAIEAGGKTGMIPPD 227
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
TT +YLE Y + SD+ A F EY FD+S+LEP V+ PH+ DN E K
Sbjct: 228 STTKEYLEKMGRGEKYREIKSDDDAEFEKEYEFDVSELEPTVSFPHTVDNTRTITEAKKM 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
D++ID+VYIG+CT G+ ED AA + + K ++PA+++V++
Sbjct: 288 DIRIDQVYIGTCTNGRIEDLRIAANILDGNKVNKKTRLIVIPASRRVYIQALK------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ + F EAG SP CG C+G K A
Sbjct: 341 -EGLLEKFVEAGAAIE-SPGCGPCVGIHKGVLA 371
>gi|332158983|ref|YP_004424262.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus sp. NA2]
gi|331034446|gb|AEC52258.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus sp. NA2]
Length = 423
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 223/387 (57%), Gaps = 23/387 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S + ++ PGD V +D + +DV P + F+ E G N +V+DRE+I
Sbjct: 3 MTIAEKILAAHSGREEVRPGDIVIAKLDFVFGNDVTMPLAIKKFR-ELGVN-EVFDRERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+ D +A R+F E IK+F++ ++G V H L +
Sbjct: 61 AIVLDHFTPNKDIKAAEQCKFSREFAREMGIKWFFEGGNVG----------VEHCLLPEL 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG+ +VP T++FV +G++
Sbjct: 111 GLVLPGDLIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGDLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ +KDLIL IG+I V GA YK MEF G +++LS+E+RMT+ NM +EAG K G++
Sbjct: 171 PWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIQKLSVEQRMTMTNMAIEAGAKTGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK- 366
D T +Y++D+ ++ SDE A + +D+SK+EP VA PH P+N +++ K
Sbjct: 231 DRKTIRYVKDRAKRRFKLYKSDEDAKYSKVIEYDVSKIEPQVAFPHLPENTVPISKASKM 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++KID+V+IGSCT G+ ED AA+V V ++P + V+
Sbjct: 291 NIKIDQVFIGSCTNGRLEDLKMAAEVLEGHEVAPWVRLIVIPCSPTVYWKAMK------- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG P+CG CLGG
Sbjct: 344 -EGILEIFLEAGA-VIGPPTCGPCLGG 368
>gi|300854092|ref|YP_003779076.1| 3-isopropylmalate dehydratase large subunit [Clostridium
ljungdahlii DSM 13528]
gi|300434207|gb|ADK13974.1| 3-isopropylmalate dehydratase large subunit [Clostridium
ljungdahlii DSM 13528]
Length = 421
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 219/387 (56%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + ++ ++ G + V +D+++ +D+ P + F K G N V+D+ KI
Sbjct: 3 MTMTQKILAYHAKMDEVKAGQLIKVKLDLVLGNDITTPVAINEFNK-IGLN-NVFDKNKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+PDH+ D ++ +R+F + IK ++++ +G + H + ++
Sbjct: 61 AIVPDHFTPNKDIKSAEQCKYVREFVKKMEIKNYFEVGRMG----------IEHALIPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++FVL G++
Sbjct: 111 GLAVCGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGEAWFKVPEAIKFVLKGKLT 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G V L+M++R T+CNM +EAG KNG+ P
Sbjct: 171 KWVSGKDVILHIIGMIGVDGALYKSMEFTGEGVSSLTMDDRFTICNMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+++ + Y +D A + D+SK+ P VA PH P+N E D+
Sbjct: 231 DENTINYVKEHSKKNYTVYEADSDAEYSQVIEIDLSKIRPTVAFPHIPENTKTIDEVGDI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ D AAA + G+KV V + PATQ +++
Sbjct: 291 KIDQVVIGSCTNGRIGDLRAAASIL--KGRKVNENVRAIIFPATQAIYLQAMK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 -EGLIEIFIEAGA-VVSTPTCGPCLGG 366
>gi|340751944|ref|ZP_08688754.1| homoaconitate hydratase [Fusobacterium mortiferum ATCC 9817]
gi|229420909|gb|EEO35956.1| homoaconitate hydratase [Fusobacterium mortiferum ATCC 9817]
Length = 424
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 221/395 (55%), Gaps = 40/395 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTLTEKI +RA++ ++ GD VWV+VD M D+ GP I +K N K+W+ + +
Sbjct: 1 MTLTEKILARAAKLDKVKAGDIVWVDVDKAMMDDILGP-RIEIAEKMKELNLKIWNPDNV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
II DHY ++ V RD+ E +K++Y+ + G CH + ++
Sbjct: 60 TIISDHYTPPANAHQASIVKFTRDWAKENEVKHYYE------------FAGPCHQVMIEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
PGE++LGTDSHTCT GA G F+TGIG+T+ VL TGK+ LKVP T++ G+M
Sbjct: 108 SRVLPGEIILGTDSHTCTYGALGAFSTGIGSTEMLGVLATGKIWLKVPETIKINFVGKMN 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++AKDLIL IG+I AGATYK++EF G ++ L M+ER+ + NM VEAG KNG++
Sbjct: 168 KGVMAKDLILAAIGKIGHAGATYKALEFSGEVIDNLIMDERLCIANMAVEAGAKNGIMRV 227
Query: 309 DGTTFKYLE----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D T +YL+ + T E + ++ E D+S++ PL + PH DN +
Sbjct: 228 DEKTKEYLKNLDLELTPEVIELLSTNSSDGVAQEITIDVSEIYPLCSCPHEVDNVEEIAK 287
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
+ VKID+ YIGSCTGG+ D AA + G+K+ V + PA+++VW
Sbjct: 288 IEGVKIDQAYIGSCTGGRYNDLKLAADIL--KGRKIAEGVRLLISPASKEVW-------- 337
Query: 423 PGSGGKTCS-----QIFEEAGCDTPASPSCGACLG 452
+ C+ Q EAG AS SCGACLG
Sbjct: 338 -----ERCAKDGILQTLSEAGATVLAS-SCGACLG 366
>gi|392426486|ref|YP_006467480.1| 3-isopropylmalate dehydratase, large subunit [Desulfosporosinus
acidiphilus SJ4]
gi|391356449|gb|AFM42148.1| 3-isopropylmalate dehydratase, large subunit [Desulfosporosinus
acidiphilus SJ4]
Length = 421
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 223/396 (56%), Gaps = 26/396 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+MT+TEKI ++ + ++ PG + +D+++ +DV GP + F K FG + KV+D K
Sbjct: 2 SMTITEKILAKHAGLDEVVPGQLITAKLDLVLANDVTGPVAIREFAK-FGTD-KVFDSHK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + ++RDF Q I++++++ +G + H L +
Sbjct: 60 VALVPDHFAPNKDISSAEQCKVMRDFARSQEIEHYFEVGKMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG++++G DSHTCT GA G FATG+G+TD L TG+ +VP +++FV G
Sbjct: 110 QGLTLPGDLIIGADSHTCTYGAVGAFATGVGSTDCAAGLATGEAWFRVPESMKFVFHGTN 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
Y+ KDLIL +IG+I V GA Y++MEF G + LSM+ R T+CNM +EAG KNG++
Sbjct: 170 FQKYVGGKDLILYLIGKIGVDGARYRAMEFAGEGISALSMDNRFTMCNMAIEAGAKNGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TF YLE + Y YSD+ A+++ +++ + VA PH P+N +E
Sbjct: 230 APDEKTFAYLEGRAKHSYTSYYSDKDANYVEIQDINVADIPLQVAFPHLPENTKSVQEAS 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+K+D+V IGSCT G+ ED AA + GKKV ++ + P TQ ++ D
Sbjct: 290 GIKVDQVVIGSCTNGRLEDLRLAADIL--RGKKVHPEIRLLIFPGTQTIYRDAMK----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ EAG ++P+CG CLGG A+
Sbjct: 343 ---EGIIDTLIEAGAAV-STPTCGPCLGGHMGILAK 374
>gi|121534912|ref|ZP_01666731.1| homoaconitate hydratase family protein [Thermosinus carboxydivorans
Nor1]
gi|121306511|gb|EAX47434.1| homoaconitate hydratase family protein [Thermosinus carboxydivorans
Nor1]
Length = 420
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 212/391 (54%), Gaps = 37/391 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-----VWD 124
T++EKI ++A+ P + GD +WVNVD M D+ GP + E E K VWD
Sbjct: 4 TMSEKILAKAAGVPTATAGDILWVNVDKAMMDDILGP------RVEIAEKMKEIKDEVWD 57
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
R+K+VII DHY + + V RD+ + +Y+ + G CH
Sbjct: 58 RDKVVIISDHYTPPATIKQAEIVKFTRDWAKTHGVANYYE------------FIGPCHQV 105
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ + GH PG V+LGTDSHTC GA G FA+G+G+T+ +L TGK L+VP T++
Sbjct: 106 MVEYGHVLPGTVVLGTDSHTCMGGALGAFASGVGSTEMLGILLTGKTWLRVPETIKVEWT 165
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G +PD ++AKD+ L+ IG I AGATYK++E+VG + L ++ERM + NM VE G K G
Sbjct: 166 GRLPDGVMAKDMSLKTIGTIGHAGATYKAVEYVGDAITNLCLDERMAITNMAVEMGAKAG 225
Query: 305 VVPADGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
++ D +YL+ + + Y SD A F + YRFD S+LEP+VA PH DN
Sbjct: 226 LMAPDTKVVEYLKARGITEGYTLFASDSDAVFCATYRFDASELEPVVACPHEVDNVTELS 285
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
K I + YIGSCTGG+ D AAA+V G+KV V + PA+ ++W
Sbjct: 286 NVKGQVIHQAYIGSCTGGRYNDLAAAARVL--KGRKVANGVRLLVSPASHEIWRQ----- 338
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ I EAG A P+CG C+G
Sbjct: 339 ---AAADGILSILAEAGAIILA-PTCGVCVG 365
>gi|147920551|ref|YP_685653.1| 3-isopropylmalate dehydratase large subunit [Methanocella arvoryzae
MRE50]
gi|110621049|emb|CAJ36327.1| 3-isopropylmalate dehydratase, large subunit [Methanocella
arvoryzae MRE50]
Length = 421
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 223/392 (56%), Gaps = 31/392 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWD 124
MT+TEKIF RAS K + GD V ++D MTHD+ GP G + I K + E KVWD
Sbjct: 1 MTITEKIFGRASGK-SVKAGDFVLADIDRAMTHDITGPLAVEGFYEIVKNQ--EEKKVWD 57
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
EKIVI+ DH + A +N +LR F +Q I++FYD+ ++GVCH
Sbjct: 58 PEKIVILFDHQVPADSLAAAQNHIMLRKFAKDQKIRHFYDV-----------FEGVCHQV 106
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ ++GH PG +++G+DSHTC GA G FATGIG+TD GK+ KVP T+RF ++
Sbjct: 107 MPEKGHVEPGMLVVGSDSHTCAYGALGAFATGIGSTDMAAAFALGKLWFKVPETIRFEVN 166
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G + D + +KD+IL++IG++ GA YK+ E+ G +E L + +RMT+ NM +E GGK G
Sbjct: 167 GRLDDRVSSKDVILKLIGDVGADGARYKACEYAGEVIESLDISQRMTISNMAIEMGGKAG 226
Query: 305 VVPADGTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
+V D T +Y++ + Y + + SDE A + +D+S++ P VA PH+ DN
Sbjct: 227 IVEPDKKTEEYVKARVK-GYKLDKNMKSDEGAKYADVREYDLSEMPPQVACPHNVDNVVD 285
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
E + KID+V++GSCT G+ ED AA++ + V ++PA++ +M
Sbjct: 286 ISEVEGKKIDQVFLGSCTNGRFEDLKIAAEIMGSKPVARGVRMIVIPASRTEYMKALRAG 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG +P CG C+GG
Sbjct: 346 LIDQ--------FMTAGA-MVENPCCGPCMGG 368
>gi|401680797|ref|ZP_10812707.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. ACP1]
gi|400218136|gb|EJO49021.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. ACP1]
Length = 419
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 228/390 (58%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGKIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T +Y++ + + P EP+ D A + D+S+L+P+VA PH P N E
Sbjct: 228 PYDEITEEYIKGRVNRPVEPINPDPDAVYAQTVTIDLSQLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|116750409|ref|YP_847096.1| 3-isopropylmalate dehydratase large subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116750451|ref|YP_847138.1| 3-isopropylmalate dehydratase large subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116699473|gb|ABK18661.1| 3-isopropylmalate dehydratase, large subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116699515|gb|ABK18703.1| 3-isopropylmalate dehydratase, large subunit [Syntrophobacter
fumaroxidans MPOB]
Length = 419
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 225/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT++EKI +R S K + P D + +D + +D+ P + F+K ++V+D E+I
Sbjct: 3 MTISEKILARHSGKSTVLPDDLIEAGIDFALGNDITAPLAIEAFRKVGA--SRVFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D + ILRDF E N+ +++++ +G V H L ++
Sbjct: 61 ALVPDHFAPNKDIASAMQCKILRDFAREWNLTHYFEVGRMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + TG+V KVP +++FV G++
Sbjct: 111 GLVLPGDVVIGADSHTCTYGALGAFATGVGSTDLAAAMITGRVWFKVPFSMKFVYRGKLG 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y++MEF G ++RL M +R ++CNM +EAG K G++
Sbjct: 171 PWVGGKDLILYTIGQIGVDGARYRAMEFTGEVIDRLPMSDRFSMCNMAIEAGAKAGIIAP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD 367
D T +Y++ + YE SD A+F S + +D+S EP+VA PHSP N R ++R +
Sbjct: 231 DPVTEEYVKGRAKRSYEFYRSDPDAAFESVHEWDVSAFEPMVALPHSPANVRPVSRIPRT 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ ED AA + G+KV V ++PAT++++
Sbjct: 291 V-IDQVVIGSCTNGRYEDLETAAAIL--KGRKVAPGVRCMIIPATREIYRQAL------R 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
G + + EA T P+CG CLGG
Sbjct: 342 NGLLETFVDAEAAVST---PTCGPCLGG 366
>gi|255283336|ref|ZP_05347891.1| 3-isopropylmalate dehydratase, large subunit [Bryantella
formatexigens DSM 14469]
gi|255266190|gb|EET59395.1| 3-isopropylmalate dehydratase, large subunit [Marvinbryantia
formatexigens DSM 14469]
Length = 422
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 223/388 (57%), Gaps = 26/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + A+ P + G + ++D+++ +D+ P + K E V++++KI
Sbjct: 3 MTMTQKILAAAAHLPSVEAGQLIEADLDLVLGNDITSPVAIHEMDKFTKEG--VFNKDKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+I D ++ + +R F + +I ++D+ +G + H L +
Sbjct: 61 ALVMDHFIPNKDIKSAEHCKCVRQFAAKHDITNYFDVGQMG----------IEHALLPES 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP +RF L G+
Sbjct: 111 GLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIRFHLVGKPS 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KD+IL IIG I V GA Y+SMEF G V+ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 171 EWVSGKDVILHIIGMIGVDGALYRSMEFTGEGVKNLSMDDRFTIANMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-KD 367
D Y+++ + PY+ +DE A + EY D+S L+P VA PH P+N E +D
Sbjct: 231 DDLAIAYMKEHSQRPYKIYEADEDAVYDEEYTIDLSALKPTVAFPHLPENTKTIDEITED 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+ IGSCT G+ +D AAK+ G+KVK V ++PATQKV++
Sbjct: 291 VVIDQAVIGSCTNGRIDDLRCAAKIL--EGRKVKKGVRCIVIPATQKVYLQAME------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 343 --EGLLKTFIEAGA-VVSTPTCGPCLGG 367
>gi|347531888|ref|YP_004838651.1| 3-isopropylmalate dehydratase, large subunit [Roseburia hominis
A2-183]
gi|345502036|gb|AEN96719.1| 3-isopropylmalate dehydratase, large subunit [Roseburia hominis
A2-183]
Length = 420
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 222/386 (57%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P + G + ++D+++ +D+ P I + + + V+D++K
Sbjct: 2 GMTMTQKILAAHAGLPSVCAGQLIEADLDLVLGNDITSP--VAIHEMDKMKVDGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH++ D ++ ++ +R+F +I ++D+ ++G + H L +
Sbjct: 60 IALVLDHFVPNKDIKSAQHCKCVREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 110 KGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPAAIKFNLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGIQYLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+E + PY +DE A + E+ D+S L+P VA PH P+N E +
Sbjct: 230 VDDLTKQYMEKHSKRPYVIYEADEDAEYEQEFTIDLSTLKPTVAFPHLPENTHTIDEVGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+V IGSCT G+ +D AA + + ++PATQ++++D
Sbjct: 290 IKIDQVVIGSCTNGRMDDLRVAASILKGHRVAKGLRVIVIPATQQIYLDAME-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 EGLLKTFIEAGA-VVSTPTCGPCLGG 366
>gi|300087777|ref|YP_003758299.1| 3-isopropylmalate dehydratase large subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527510|gb|ADJ25978.1| 3-isopropylmalate dehydratase, large subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 417
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 221/390 (56%), Gaps = 32/390 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI + + + PG + VD+++ +D+ P + F K FG KV+D +KI
Sbjct: 1 MNLAEKILASHAGLDHVEPGQFINGKVDVILANDITAPIAIREFWK-FGLE-KVFDPKKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH++ D + ILR+F Q + +F + G GV H+ L ++
Sbjct: 59 VFVPDHFVPNKDIASAEQAKILREFARAQGVNFF----ECGQM-------GVEHVILHEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG + +KVPPT++FV G++P
Sbjct: 108 GLVVPGDLVIGADSHTCTYGALGAFATGMGSTDIASAMATGDIWMKVPPTIKFVFRGKLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KDLIL IG+I V GA Y +MEF G +ERLS+E R T+ NM +EAG K G+ A
Sbjct: 168 KYVSGKDLILHTIGDIGVDGALYAAMEFAGEAIERLSLEGRFTMANMAIEAGAKAGLFYA 227
Query: 309 DGTTFKYLEDKTS---LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D Y + ++ + +EP D A + Y +D+S LEP VA PH P N +
Sbjct: 228 DKKAVSYAKGRSERKPVVFEP---DADAVYQQIYEYDVSLLEPQVALPHLPSNVKPVSQV 284
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
V +D+V IGSCT G+ ED +AA V +GKKV + ++P +Q+V+++
Sbjct: 285 GRVYLDQVVIGSCTNGRFEDLQSAAMVL--NGKKVNSNLRCIIIPGSQQVYLEALK---- 338
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+IF +AGC ++P+CG CLGG
Sbjct: 339 ----AGYIEIFIQAGCAV-STPTCGPCLGG 363
>gi|302391005|ref|YP_003826825.1| 3-isopropylmalate dehydratase large subunit [Acetohalobium
arabaticum DSM 5501]
gi|302203082|gb|ADL11760.1| 3-isopropylmalate dehydratase, large subunit [Acetohalobium
arabaticum DSM 5501]
Length = 420
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 222/400 (55%), Gaps = 21/400 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI + + + ++ PG+ + +DI++ +DV P + F K G + +V+D+E+
Sbjct: 2 GMTMVEKILADHAGREEVQPGELINARLDIVLGNDVTTPVAIKEFDK-IGVD-EVFDKER 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VI+PDH+ D + +R F E+ + +++I ++G + H L +
Sbjct: 60 VVIVPDHFAPNKDINSAEQCKFIRGFAEEKELVNYFEIGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+ ++G DSHTCT GA G FATG+G+TD + TG+ KVP T++FV +GE+
Sbjct: 110 QGLVLPGDAVIGADSHTCTYGALGAFATGVGSTDMAAGMATGEAWFKVPETIKFVYNGEL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D++ KDLIL IG+I V GA YK+MEF G +E L M+ R T+ NM +EAGGK G++
Sbjct: 170 NDWVGGKDLILYTIGDIGVDGALYKAMEFTGEVIENLPMDHRFTMSNMAIEAGGKCGLIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TT Y+ED+ Y+ SDE A + +D+S++EP VA PH P+N E +
Sbjct: 230 PDQTTIDYVEDRAQRDYKLYQSDEDAEYDEIIEYDVSQIEPQVAFPHLPENTRGISEVGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+ IGSCT G+ D AAKV V + P TQ+++
Sbjct: 290 VEIDQAVIGSCTNGRLGDLRLAAKVLEGKKAADNVRLIVFPGTQEIYKQAMK-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + +AG ++P+CG CLGG A +A+
Sbjct: 342 EGLIETLIDAGAAV-STPTCGPCLGGHMGILAEGERAIAT 380
>gi|374636938|ref|ZP_09708473.1| homoaconitate hydratase family protein [Methanotorris formicicus
Mc-S-70]
gi|373557398|gb|EHP83822.1| homoaconitate hydratase family protein [Methanotorris formicicus
Mc-S-70]
Length = 418
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 221/401 (55%), Gaps = 37/401 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + ++ G+ V V++D++MTHD P S FK+ KVWD EKI
Sbjct: 1 MTLAEKILSKKLGR-EVCEGETVEVDIDLVMTHDGTTPLSAKAFKEM---TDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH + + +A I R+F EQ IKYFY P+ +G+CH L ++
Sbjct: 57 VIIFDHNVPANTAKAANMQKIAREFVKEQGIKYFY-----------PEGEGICHQVLVEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD GF+ TGK +KVP T+R + GE
Sbjct: 106 GHVKPNMIIAGGDSHTCTHGAFGAFATGFGATDMGFIYATGKTWIKVPKTIRVNVVGE-N 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+I E+ GATY ++E+ G V R+ ME RM L NM +E GGK G++ A
Sbjct: 165 ERITPKDVILRICKEVGRRGATYMALEYGGEVVRRMDMEGRMVLSNMAIEMGGKVGLIEA 224
Query: 309 DGTTFKYL-------EDKTSLPYEPVYSDEKASFLSEY-RFDISKLEPLVAKPHSPDNRA 360
D T++YL E+ +L + +E ++ DI+ +E +A PH PDN
Sbjct: 225 DEKTYEYLRKVGVSGEEILNLKKNAIRVNENEENYHKFIEIDITDMEEQIACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVY 418
E ID+V+IGSCT G+ D A+V GKKV V ++PA++KV++D
Sbjct: 285 DVSEVVGTPIDQVFIGSCTNGRLSDLREVARVL--KGKKVHKDVKLIIIPASKKVFLDAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ +IF EAG +P CG CLG + A
Sbjct: 343 K--------EGLIEIFIEAGA-MICTPGCGPCLGAHQGVLA 374
>gi|150015106|ref|YP_001307360.1| 3-isopropylmalate dehydratase large subunit [Clostridium
beijerinckii NCIMB 8052]
gi|189046470|sp|A6LPX4.1|LEUC_CLOB8 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|149901571|gb|ABR32404.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 419
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 221/395 (55%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+D+++ +D+ P + FKK FG + KV+ + +
Sbjct: 2 GMTMTQKILAAHAGLEAVKAGQLIEANLDLVLGNDITTPVAVNEFKK-FGTD-KVFSKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYIREFAQNMEIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TGK KVP L+FVL +
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSALKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGLQYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+D S ++ +DE A + + D+S+L P V+ PH PDN D
Sbjct: 230 VDDKTEEYLKDHASREWKVYEADEDAEYDKVFEIDLSELRPTVSFPHLPDNTRTIDNTGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ D A + GKKVK + ++P TQK+++ +
Sbjct: 290 VAIDQVVIGSCTNGRISDLRMARDIL--KGKKVKKGIRCIVIPGTQKIYLQAIKEGIVTD 347
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
EAG ++P+CG CLGG A+
Sbjct: 348 --------LVEAGA-AFSTPTCGPCLGGHMGILAK 373
>gi|383319988|ref|YP_005380829.1| 3-isopropylmalate dehydratase large subunit [Methanocella conradii
HZ254]
gi|379321358|gb|AFD00311.1| 3-isopropylmalate dehydratase, large subunit [Methanocella conradii
HZ254]
Length = 412
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 224/399 (56%), Gaps = 29/399 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFK-KEFGENAKVWDREKI 128
T++E+I RA+ K + G+ V VD M+HD G + KE G + KVWD +I
Sbjct: 3 TISEEILGRAAGK-KACAGEFVIARVDYAMSHD--GTSVLAVKALKEMGVD-KVWDPSRI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+I DH + ++E LR++ I +FYD+ + G+CH +A++
Sbjct: 59 IIPLDHLVPANNETTALLHKELREWAFSHGIVHFYDVGE-----------GICHQVMAEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSH+CT GAFG F TG+G TD + +GK+ +VP T++ +DG +P
Sbjct: 108 GFAMPGKVVVGADSHSCTYGAFGAFGTGVGATDMAEIYASGKLWFRVPETIKVTIDGGLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+ L +I + GA YK++EF G+T+ +SM RMTLCNM +E G K G+VP
Sbjct: 168 KGVTAKDVALHVIKHVKADGAAYKALEFYGSTISEMSMAGRMTLCNMAIEMGAKAGIVPP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YLE + PY PVY+++ AS+ EY FD S++ PLVA P DN E +
Sbjct: 228 DARTEAYLEGRAVEPYAPVYAND-ASYCDEYHFD-SRISPLVACPFEVDNVHDVEEVEGR 285
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+V IGSCT G+ ED AA++ G+KVK T ++PA++ V ++ + V +
Sbjct: 286 HIDQVLIGSCTNGRFEDLREAARIL--DGRKVKCRTLVIPASRGVMLEAISSGVAAT--- 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+AG T +P CG CLGG A+ M++
Sbjct: 341 -----LLKAGA-TICNPGCGPCLGGHMGVLAQGEACMST 373
>gi|14521549|ref|NP_127025.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus abyssi GE5]
gi|22001727|sp|Q9UZ07.1|LEUC1_PYRAB RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|5458768|emb|CAB50255.1| leuC-1 3-isopropylmalate dehydratase large subunit (isopropylmalate
isomerase) (EC 4.2.1.33) [Pyrococcus abyssi GE5]
gi|380742159|tpe|CCE70793.1| TPA: 3-isopropylmalate dehydratase large subunit [Pyrococcus abyssi
GE5]
Length = 423
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 223/389 (57%), Gaps = 27/389 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + SE+ ++ PG+ V +D + +DV P + F+ E G +V+DRE+I
Sbjct: 3 MTIAEKILADHSEREEVKPGEIVMAKLDFVFGNDVTMPLAIKKFR-ELGVK-RVFDRERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+ D ++ R+F E IK+F++ +G V H L +
Sbjct: 61 AIVLDHFTPNKDIKSAEQCKSSREFAKEMGIKWFFEGGSVG----------VEHCLLPEL 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG+ +VP T++F+ +GE+
Sbjct: 111 GLVLPGDLIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETMKFIYEGELQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KDLIL IG+I V GA YK MEF G+ +E LS+E+RMT+ NM +EAG K G++
Sbjct: 171 PYVTGKDLILHTIGDIGVNGALYKVMEFSGSVIEELSVEQRMTMSNMAIEAGAKTGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK- 366
D T Y++++ ++ SDE A + +D++ EP+VA PH P+N +++ K
Sbjct: 231 DKKTLDYVKERAKRKFKVYKSDEDAKYYKVIEYDVTNWEPVVAFPHLPENTVPISKAAKM 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
++KID+V+IGSCT G+ ED AA++ G+KV V ++P + V+
Sbjct: 291 NIKIDQVFIGSCTNGRIEDLRMAAEIL--EGQKVAKWVRLIVIPCSPTVYWKALK----- 343
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG P+CG CLGG
Sbjct: 344 ---EGLIEIFLEAGA-VIGPPTCGPCLGG 368
>gi|440780719|ref|ZP_20959190.1| 3-isopropylmalate dehydratase large subunit [Clostridium
pasteurianum DSM 525]
gi|440221307|gb|ELP60512.1| 3-isopropylmalate dehydratase large subunit [Clostridium
pasteurianum DSM 525]
Length = 418
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 223/392 (56%), Gaps = 21/392 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G V N+D+++ +D+ P + F+K G + KV+D+ KI
Sbjct: 1 MTMTQKIIAAHAGLDYVEAGQLVNANLDLVLGNDITSPVAIKEFRK-LGID-KVFDKNKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ + ++R+F E I ++++ ++G + H L ++
Sbjct: 59 ALVPDHFTPNKDIKSAEHCKLVREFAYEMEIVNYFEVGEMG----------IEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL G+
Sbjct: 109 GLTIPGDIVIGADSHTCTYGALGAFSTGVGSTDMAVGMATGKAWFKVPEAIKFVLKGKFN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IIG I V GA YKSMEFVG V+ +SM+ R T+ NM +EAG KNG+ P
Sbjct: 169 KWVSGKDLILHIIGMIGVDGALYKSMEFVGEGVKEISMDGRFTIANMAIEAGAKNGIFPV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +Y++D+T ++ +DE A + D+S+++P V+ PH PDN +V
Sbjct: 229 DEKALEYVKDRTDREWKVFEADENAEYSKVIEIDLSEVKPTVSFPHLPDNTRTIDNVGEV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+ IGSCT G+ ED A++ K V ++P TQ +++ +
Sbjct: 289 KIDQAVIGSCTNGRIEDLRVTAEILKGKKVKKGVRLIILPGTQSIYLQAIE--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+++F EAG ++P+CG CLGG A+
Sbjct: 341 GLAKVFIEAGA-VLSTPTCGPCLGGYMGILAK 371
>gi|256826883|ref|YP_003150842.1| 3-isopropylmalate dehydratase, large subunit [Cryptobacterium
curtum DSM 15641]
gi|256583026|gb|ACU94160.1| 3-isopropylmalate dehydratase, large subunit [Cryptobacterium
curtum DSM 15641]
Length = 423
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 210/385 (54%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EK+ S + + PG + VD+++ +D+ P + F + +N V+D +KI
Sbjct: 6 MTMAEKLLSAHAGVDSVQPGQLIDCAVDLVLANDITAPLAIRAFHELGVKN--VFDPQKI 63
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH D + + ++RDF EQ I ++Y++ +G + H L ++
Sbjct: 64 ALVPDHSTPNKDIASAKLTKMMRDFAYEQEITHYYEVGCMG----------IEHALLPEQ 113
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD G TG+ KVP T+R L+G +
Sbjct: 114 GVVGAGDLVIGADSHTCTYGALGAFSTGMGSTDVGVAFATGRAWFKVPQTIRINLEGSLA 173
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL IIG I V GA Y++MEF G +E LS+E RMT+ NM +EAGGK G+ P
Sbjct: 174 STVTAKDAILHIIGRIGVDGALYQAMEFHGGAIEGLSIEGRMTMANMAIEAGGKAGLFPV 233
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TT YL+ +T PY DE A + D + + P VA PH P N E +DV
Sbjct: 234 DTTTRAYLDARTERPYTVYNPDEGAVYARTITIDAADIVPTVAFPHLPSNTRPVAEARDV 293
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+ IGSCT G+ ED AAA V +V ++PATQ V+ +
Sbjct: 294 AIDQAVIGSCTNGRIEDMRAAAHVLNGRTVHPRVRCIVIPATQAVFKQCID--------E 345
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ IF A C ++P+CG CLGG
Sbjct: 346 GLTDIFVNAHC-VVSTPTCGPCLGG 369
>gi|167770725|ref|ZP_02442778.1| hypothetical protein ANACOL_02071 [Anaerotruncus colihominis DSM
17241]
gi|167667320|gb|EDS11450.1| 3-isopropylmalate dehydratase, large subunit [Anaerotruncus
colihominis DSM 17241]
Length = 419
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 221/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+++KI ++ + + PG + +VD+++ +D+ P + +K E+ V+ +
Sbjct: 2 AMTMSQKILAKKAGLDHVEPGQLINADVDLVLGNDITTPVAIDELEKYGFEH--VFSKTG 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D +A + RDF + I +FYD+ +G + H L +
Sbjct: 60 IAIVLDHFVPNKDIKAAQLSKRCRDFAAKHGIVHFYDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++G DSHTCT GA G F+TG G+TD V+ TGK KVP +RF L G+
Sbjct: 110 QGLVAPGELIVGADSHTCTYGALGAFSTGFGSTDMAAVMATGKCWFKVPAAIRFELSGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG I V GA Y+SMEF G + LSM++R+T+ NM +EAGGKNG+
Sbjct: 170 QEWVSGKDVILHIIGMIGVDGALYQSMEFGGEGLRHLSMDDRLTMANMAIEAGGKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + + YE D+ A++ D+S + P VA PH P+N E D
Sbjct: 230 VDEVTRAYMQGRVNRTYETFMPDDGAAYARVIEIDLSSIRPTVAFPHLPENTRTVDEAGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V+ID+V IGSCT G+ D AAA+ L SGKKV V ++P TQ+++ + +
Sbjct: 290 VRIDQVVIGSCTNGRIGDLAAAAR--LMSGKKVADGVRCIVIPGTQQIYREAIHAGYIDT 347
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
F +AGC ++P+CG CLGG
Sbjct: 348 --------FLDAGCAV-STPTCGPCLGG 366
>gi|431793599|ref|YP_007220504.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783825|gb|AGA69108.1| 3-isopropylmalate dehydratase, large subunit [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 421
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 222/389 (57%), Gaps = 26/389 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+TEKI + + ++ PG + +D+ + +D+ GP + F+K EN VWD+ K
Sbjct: 2 AMTITEKILAEHAGLDRVVPGQLITAKLDLTLANDITGPVAIREFEKFGVEN--VWDKNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + ++R+F +Q I ++++ +G V H L +
Sbjct: 60 VALVPDHFTPNKDIASAELSKVMREFAKKQEIVHYWEQGRVG----------VEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG+V++G DSHTCT GA G FATG+G+TD + TG+ ++P +++FV G
Sbjct: 110 QGVTLPGDVIIGADSHTCTYGALGAFATGVGSTDLAAGMATGEAWFRIPESIKFVFKGTN 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KDLIL IG+I V GA Y++MEF G + LSM+ R T+CNM VEAG KNG++
Sbjct: 170 FQPWVSGKDLILYTIGKIGVDGARYQAMEFTGEGIAALSMDSRFTMCNMAVEAGAKNGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T YL+ + PY+ +SD A ++ Y +D++ + VA PH P+N E K
Sbjct: 230 APDQKTLDYLQARAKRPYKVYHSDPDAEYVKVYEWDVADIPLQVAFPHLPENAKPVSEGK 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+KID+V IGSCT G+ ED AA++ GKKV V ++P TQ D+Y +
Sbjct: 290 GIKIDQVVIGSCTNGRLEDLRVAAQIM--RGKKVYSDVRLIVIPGTQ----DIYKQAMK- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 343 ---EGLLDIFIDAGA-VVSTPTCGPCLGG 367
>gi|121536002|ref|ZP_01667793.1| homoaconitate hydratase family protein [Thermosinus carboxydivorans
Nor1]
gi|121305417|gb|EAX46368.1| homoaconitate hydratase family protein [Thermosinus carboxydivorans
Nor1]
Length = 419
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 221/402 (54%), Gaps = 28/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGS-FGIFKKEFGENAKVWDREK 127
MT+ EKI +RA+ K Q+ PG+ VW NVD M D+ GP K G+ ++WD+EK
Sbjct: 3 MTMAEKIIARAANKRQVKPGEFVWANVDTAMMDDLLGPRVVIAEHIKRLGD--QIWDKEK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+VII DHY ++ + R++ E I +Y+ G CH LA+
Sbjct: 61 VVIISDHYSPAANITQAEILQFTRNWAKEYGINKYYE------------GLGPCHQVLAE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG +++GTDSHT TAGAFG F TGIG+T+ VL +G++ L+VP T+ FV G++
Sbjct: 109 KGFDIPGTLMVGTDSHTTTAGAFGCFGTGIGSTEMLGVLVSGQIWLRVPETMLFVWHGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD+IL+ I EI AGATYK MEF G+ +E LS++ERMT+ NM VEAG K G++
Sbjct: 169 QQGVYAKDIILRTIKEIGQAGATYKVMEFAGSCIENLSVDERMTIANMAVEAGAKTGLMA 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D F YLE + P+YSD A + ++ F+ L P +A PH D E +
Sbjct: 229 PDDKVFAYLESIGAPKGTPLYSDPDAEYAQKFEFNADTLVPQIALPHEVDKVVDITEAEG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
I + Y+GSCT G+ D + AAK+ G+KV V + PA++ ++
Sbjct: 289 EVIHQAYLGSCTNGRYPDLVEAAKIL--KGRKVHPDVRLLVSPASRSIYHRAVR------ 340
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +I +AG A PSCGACLG AR ++S
Sbjct: 341 --EGIIEILSDAGAMILA-PSCGACLGLHSGILARGERAISS 379
>gi|119510822|ref|ZP_01629947.1| 3-isopropylmalate dehydratase, LeuC subunit [Nodularia spumigena
CCY9414]
gi|119464501|gb|EAW45413.1| 3-isopropylmalate dehydratase, LeuC subunit [Nodularia spumigena
CCY9414]
Length = 574
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 221/388 (56%), Gaps = 22/388 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHD-VCGPGSFGIFKKEFGENAKVWDREK 127
MTL EK+ ++AS + PG+ V+ VD+ ++HD V GP + F K +G+ AK+WD ++
Sbjct: 150 MTLVEKLIAKASGNTYVRPGEVVFAQVDLALSHDAVAGPVA-TTFYKHYGKEAKLWDAQR 208
Query: 128 IVIIPDHYIFTSDERANRNVDILR----DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
+V++ DH+I +D R ++ +++ DF +Q + +DI G + G+CH+
Sbjct: 209 VVLVADHFIQVNDIRNDQKANVMYQEMIDFAKKQGC-HLFDIVSPG------EAAGICHV 261
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L ++G RPG ++ GTDSHTCT GA G F+ G+G TD + G + ++VP TL F L
Sbjct: 262 LLPEKGFVRPGMIIAGTDSHTCTYGALGAFSAGVGTTDMANIYAMGDMWIRVPSTLVFEL 321
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
G +P ++ AKD+IL I+G+I AGAT K MEF G+ +E++ +ER+TL NM +E G
Sbjct: 322 SGTLPPHISAKDIILFILGQIGCAGATSKVMEFRGSILEQMPFDERLTLANMAIECGAIC 381
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G++ D TT Y+ ++ +E + +D A + Y+FDIS LEP +A+P PD
Sbjct: 382 GLIVPDETTRNYVRSRSDQEFEELIADPDAEYEKVYKFDISNLEPQIARPPKPDQVVPIS 441
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+ ++ I + +IGSCTGGK D AA+V V F+VPA+ ++ L
Sbjct: 442 QIEETPITKAFIGSCTGGKLYDLAQAAEVLQDRQVADGVNLFIVPASVEIREKAEAL--- 498
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACL 451
IF +AG S CGAC+
Sbjct: 499 -----GYMDIFAQAGAKILKS-GCGACI 520
>gi|291532353|emb|CBL05466.1| 3-isopropylmalate dehydratase, large subunit [Megamonas hypermegale
ART12/1]
Length = 420
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 219/386 (56%), Gaps = 25/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
MT+TEKI ++ + + PG + +D+++ +DV P + KEF + K V+D K
Sbjct: 3 MTMTEKILAKHAGIDVVKPGQLINCKLDMVLANDVTAPPAI----KEFEKIGKPVFDNTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ I+RDF + NI +++I +G + H+ L +
Sbjct: 59 IALVPDHFTPNKDIKSAGLAKIVRDFAHKHNIVNYFEIGRVG----------IEHVILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG V +G DSHTCT GA G F+TG+G+TD G L TG+ KVP T++ + G+
Sbjct: 109 KGIVAPGMVTIGADSHTCTYGALGGFSTGVGSTDLGVALATGEAWFKVPETIKVNITGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y+ KD++L +IG I V GA YK++EF G V+ L++ +R+T+ NM +EAG KNG+ P
Sbjct: 169 PKYICGKDVMLTLIGMIGVDGALYKALEFAGEGVKELNITDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++D+ + PYE V +D A++ ++S+L+P+VA PH P+N K+
Sbjct: 229 VDDETLNYIKDRVTKPYEIVEADSDATYCQTVEINLSELKPVVAFPHLPENTHSVESIKE 288
Query: 368 -VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ ID+V IGSCT G+ ED AA + V ++P +Q+V++D
Sbjct: 289 PITIDQVVIGSCTNGRLEDLAIAASILKGHKVHPNVRCIIIPGSQQVYLDAIH------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
F EAG ++P+CG CLG
Sbjct: 342 -NGYVDTFIEAGAAV-STPTCGPCLG 365
>gi|323141299|ref|ZP_08076195.1| 3-isopropylmalate dehydratase, large subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414256|gb|EFY05079.1| 3-isopropylmalate dehydratase, large subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 421
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 224/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ + + +S GD + VD+++ +D+ GP + F+K G+ V+D+ KI
Sbjct: 3 MTMTQKILAKHAHRDSVSAGDLLVSQVDLVLANDITGPPAINEFEK-IGK--PVFDKNKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ +RDF + IK ++++ +G + H L +
Sbjct: 60 ALVPDHFSPCKDIKSATMCKRMRDFARKHEIKNYFEVGQMG----------IEHALLPDK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GA +TG+G TD G + +G KVP ++ + G++P
Sbjct: 110 GLVAPGEIIIGADSHTCTYGALNALSTGMGQTDIGCAMASGTSWFKVPQAIKVNMTGKLP 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG I V GA Y+S+EF G V LSM +R+T+CNM +EAGGKNG+ P
Sbjct: 170 KYVKGKDIILTIIGMIGVDGARYQSLEFTGEGVSELSMADRLTICNMAIEAGGKNGIFPV 229
Query: 309 DGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T ++L+++ + +E V +DE A + + +L P+VA PH P+N A+E
Sbjct: 230 DEKTIEFLKERGVTREWEAVTADEDAEYARVLDIKLDELVPVVAYPHLPENTHPAKEGHA 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA++ G KV V ++PATQ+++ +
Sbjct: 290 IKIDQVVIGSCTNGRLEDLEQAAEIL--KGHKVCDHVRMIIIPATQQIYQEAMH------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P+CG CLGG
Sbjct: 342 --RGYIDTFIDAGAAV-STPTCGPCLGG 366
>gi|325678319|ref|ZP_08157945.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus albus 8]
gi|324109999|gb|EGC04189.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus albus 8]
Length = 420
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 230/402 (57%), Gaps = 27/402 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + ++D+++ +DV P + F K +++++KI
Sbjct: 3 MTMTQKILAAHAGLDEVKAGQLIMADLDLVLGNDVTTPVAINEFNK--AGFTDIFNKDKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A R+F + +I ++YD+ D+G + H L ++
Sbjct: 61 TMVMDHFTPNKDIKAATQCKQCREFACKYDITHYYDVGDVG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ ++G DSHTCT GA G F+TG+G+TD + GK KVP ++F + G++P
Sbjct: 111 GLVVPGDAVIGADSHTCTYGALGAFSTGVGSTDMCAGMAAGKTWFKVPSAIKFNIVGKLP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y AKD+IL IIG I V GA Y+SMEF G ++ L+ME+R+ + NM +EAG KNG+
Sbjct: 171 KYSAAKDVILHIIGMIGVDGALYRSMEFSGEGLKNLTMEDRLCMANMAIEAGAKNGIFAV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+ +T Y+ +D A + EY D+S+++P VA PH P+N + D+
Sbjct: 231 DEVTKEYLKGRTDREYKVFEADADAEYDEEYTIDLSEIKPTVAFPHLPENARTFDDIPDI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ ED AAA++ GKKV V ++PATQ ++M +
Sbjct: 291 KIDQVVIGSCTNGRIEDLRAAAEIL--KGKKVASHVRCIVIPATQHIYM---------TA 339
Query: 427 GKTC-SQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
K C +IF +GC ++P+CG CLGG A + +A+
Sbjct: 340 MKECLLEIFINSGC-AVSTPTCGPCLGGHMGILAAGEKAVAT 380
>gi|452209014|ref|YP_007489128.1| Coenzyme B synthesis from 2-oxoglutarate [Methanosarcina mazei
Tuc01]
gi|452098916|gb|AGF95856.1| Coenzyme B synthesis from 2-oxoglutarate [Methanosarcina mazei
Tuc01]
Length = 383
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 199/354 (56%), Gaps = 24/354 (6%)
Query: 99 MTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQN 158
M HD + FK+ E KVWD KIVI DH + E + +R++ EQ
Sbjct: 1 MAHDGTSVLAVNAFKEM--EMEKVWDPSKIVIPFDHIAPANTETSATLQKEIREWVQEQG 58
Query: 159 IKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG 218
I FY++ + G+CH L + G PG++++G DSH+CT GAFG FATG+G
Sbjct: 59 IPNFYEVGE-----------GICHQVLPENGFALPGKLVVGADSHSCTYGAFGAFATGVG 107
Query: 219 NTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVG 278
TD + TGK+ KVP + R ++G + + AKDL L +IG+ +AGATYK++EF G
Sbjct: 108 ATDMAEIFATGKLWFKVPESFRMTVEGSLEKNVYAKDLTLYLIGKTGIAGATYKAVEFYG 167
Query: 279 TTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSE 338
+ LS+ RMTLCNM +E G K G+VP D TF +L+++ PYEPVYSD AS+L E
Sbjct: 168 QVISELSVSGRMTLCNMAIEMGAKTGIVPPDEKTFDFLKNRAVAPYEPVYSDPDASYLKE 227
Query: 339 YRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGK 398
+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V GK
Sbjct: 228 FVYDAGDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAASVL--KGK 285
Query: 399 KVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
KV V T ++PA++ + +I +AG T A+P CG CLG
Sbjct: 286 KVTVRTIIIPASRSTLLAAIK--------NGTMEILLKAGV-TLATPGCGPCLG 330
>gi|254168267|ref|ZP_04875113.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197622776|gb|EDY35345.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 418
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 215/386 (55%), Gaps = 27/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MTLTEKI ++ + K ++ PG+ V V +M+HD S I K F + KVW+ +
Sbjct: 3 MTLTEKILAKKAGKKEVQPGEIVTVEPTWVMSHD----NSAAILLK-FKKTGVKKVWNPK 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KIVII DH + N +R+F EQ I+ F+DI G+CH +A
Sbjct: 58 KIVIILDHTVPAPTADYANNHKSIREFVKEQGIENFWDIN-----------TGICHQVMA 106
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G+ PG V++G DSHT T GAFG FA GIG ++ + TGK+ L+VP + +++GE
Sbjct: 107 EKGYDLPGAVIVGADSHTTTPGAFGAFAAGIGRSEVAAIWATGKIWLRVPESYEIIVEGE 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
MP + AKDL L IIG+I+ +GA YK++EF G T+ +S+ R+ L NM E G KNG++
Sbjct: 167 MPKGVFAKDLALHIIGDITASGAVYKAVEFKGETIRNMSIASRIVLTNMSAEMGAKNGII 226
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
AD T YL+ + PYE ++ DE A + Y +D S L P +A PH+ DN + +
Sbjct: 227 EADEKTEAYLKTRARAPYEIMHPDEDAEYERRYEYDASDLVPKIAFPHTVDNVYDIDKAE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+++++V++G+CT G+ ED AA++ + V + PA+ VW + +
Sbjct: 287 GIEVNQVFLGTCTNGRVEDLEVAARILKGNKVNKNVRMLVFPASWDVWRE--------AN 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K + EAG +P CG CLG
Sbjct: 339 EKGILRTLAEAGA-VIMNPGCGPCLG 363
>gi|389852283|ref|YP_006354517.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus sp. ST04]
gi|388249589|gb|AFK22442.1| 3-isopropylmalate dehydratase large subunit [Pyrococcus sp. ST04]
Length = 423
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 223/389 (57%), Gaps = 27/389 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + K ++ PG+ V +D ++ +DV P + F+ E G +V+D E+I
Sbjct: 3 MTIAEKILAEHAGKEEVKPGEIVMAKLDFMLGNDVTTPLAIKKFR-ELGVE-RVFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+ D +A R+F EQ IKYF++ GN GV H L +
Sbjct: 61 AIVLDHFTPNKDIKAAEQCKFAREFAREQRIKYFFE---GGNV-------GVEHCLLPEL 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G FATG+G+TD + TG+ +VP T++FV +G++
Sbjct: 111 GLVLPGDLVIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETMKFVYEGDLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA YK MEF G +E+LS+E+RMT+ NM +EAG K G++
Sbjct: 171 PWVTGKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGIIEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK- 366
D T +Y++++ ++ SDE A + + + +EP VA PH P+N +++ K
Sbjct: 231 DKKTIEYVKERAQRDWKIYRSDEDAKYYKVIEYKVENIEPQVAFPHLPENTVPISKAAKM 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
D+KID+V+IGSCT G+ ED AA+V G+KV V ++P + V+
Sbjct: 291 DIKIDQVFIGSCTNGRIEDLRMAAEVL--EGQKVAPWVRLIIIPCSPSVYWKALK----- 343
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG P+CG CLGG
Sbjct: 344 ---EGLLEIFLEAGA-VIGPPTCGPCLGG 368
>gi|225378198|ref|ZP_03755419.1| hypothetical protein ROSEINA2194_03858 [Roseburia inulinivorans DSM
16841]
gi|225210004|gb|EEG92358.1| hypothetical protein ROSEINA2194_03858 [Roseburia inulinivorans DSM
16841]
Length = 436
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 221/386 (57%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P +S G + +D+++ +D+ P I + + + V+D++K
Sbjct: 18 GMTMTQKILAAHAGLPSVSAGQLIEAELDLVLGNDITSP--VAIHEMDKMKVDGVFDKDK 75
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH++ D ++ + +R+F +I ++D+ ++G + H L +
Sbjct: 76 VALVLDHFVPNKDIKSAEHCKCVREFACRHDITNYFDVGEMG----------IEHALLPE 125
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 126 KGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAMKFNLTGKP 185
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + L+M++R T+ NM +EAGGKNG+ P
Sbjct: 186 AAWISGKDIILHIIGMIGVDGALYKSMEFVGDGIRYLTMDDRFTIANMAIEAGGKNGIFP 245
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E+ + PY +DE A + +EY D+S L+P V+ PH P+N E D
Sbjct: 246 VDDLAKQYMEEHSKRPYVVYEADEDAEYDAEYTIDLSTLKPTVSFPHLPENTRTIDEVGD 305
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
VKID+V IGSCT G+ +D AA V K + ++PATQK+++
Sbjct: 306 VKIDQVVIGSCTNGRMDDLRIAASVLKGKKVKKGLRVIVIPATQKIYLQAME-------- 357
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 358 EGLLRTFIEAGA-VVSTPTCGPCLGG 382
>gi|395225618|ref|ZP_10404137.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thiovulum sp. ES]
gi|394446241|gb|EJF07079.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thiovulum sp. ES]
Length = 418
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 233/391 (59%), Gaps = 31/391 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
+T+TEKIFS + K ++ GD V V +D+++ +D+ P S FK+ K+ + +
Sbjct: 3 LTITEKIFSEHAGK-EVRAGDIVEVPIDMVIGNDITTPISIRAFKESGA--TKLANPDGF 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+I D + I R+F EQ++K F+D KD+G + H L ++
Sbjct: 60 SIVLDHFIPAKDIASANQAKISREFAFEQDMKNFFDEKDMG----------IEHALLPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G FATG+G+TD + + TG KVP T++ V GE+
Sbjct: 110 GLISPGDVVIGADSHTCTHGALGAFATGMGSTDLAYAMVTGGNWFKVPETIKVVFSGELQ 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDLIL++I +I V GA Y+++EF G+T+ L M+ R +LCNM +EAG K+G++
Sbjct: 170 EHVTGKDLILELIRQIGVDGALYQALEFTGSTISTLDMDSRFSLCNMAIEAGAKSGIIAV 229
Query: 309 DGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARE- 364
D T ++L+DK +L EP YSD A ++ D+SKLEP++A PH P N +L+
Sbjct: 230 DEITKEFLKDK-NLAREPKEFYSDPDAKYIQTIEIDVSKLEPVIAYPHLPSNGHSLSVAV 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPV 422
D+++D+V+IGSCT G+ D A+K+ GKKV T ++ PATQK+ +
Sbjct: 289 ADDIRVDQVFIGSCTNGRLSDIEIASKI--VKGKKVARHTRMIVTPATQKILEE------ 340
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ K + +AG ++P+CGACLGG
Sbjct: 341 --ASQKGYIKDLVDAGA-VVSNPTCGACLGG 368
>gi|169335473|ref|ZP_02862666.1| hypothetical protein ANASTE_01887 [Anaerofustis stercorihominis DSM
17244]
gi|169258211|gb|EDS72177.1| 3-isopropylmalate dehydratase, large subunit [Anaerofustis
stercorihominis DSM 17244]
Length = 424
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 216/390 (55%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ + + G + +DI+M +D+ + FKK + KV++ EK
Sbjct: 2 GMTMTQKILAKHAGLNSVKAGQLIEAKLDIVMGNDITTAVALKEFKKTGAK--KVFNEEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ I+ DH+ D +A R+F + NIK F+D+ +G + H L +
Sbjct: 60 VAIVLDHFTPNKDIKAAEQCKSCRNFAWDMNIKNFFDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGEV++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++FVL +
Sbjct: 110 KGIVVPGEVIIGADSHTCTYGALGAFSTGVGSTDMAIGMATGEAWFKVPSAIKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA Y+SMEF G ++ LSM++R ++ NM +EAG KNG+ P
Sbjct: 170 AKWISGKDIILHIIGKIGVDGALYRSMEFTGDGIKYLSMDDRFSMANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y ++ ++ +E +DE A + D+SKL P V+ PH P+N E
Sbjct: 230 VDDKTIEYAKEHSTKTFEVFEADEDAQYDEVIEIDLSKLRPTVSFPHLPENTKTVDEAGK 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV----YTLPVP 423
V ID+ IGSCT G+ ED AA + KV T ++PATQK+++D Y +
Sbjct: 290 VYIDQAVIGSCTNGRLEDIKMAADILRGKQVDKKVRTIVIPATQKIYLDSIKLGYVEDIV 349
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+G IF ++P+CG CLGG
Sbjct: 350 NAGA-----IF--------STPTCGPCLGG 366
>gi|342213878|ref|ZP_08706597.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. oral
taxon 780 str. F0422]
gi|341597466|gb|EGS40025.1| 3-isopropylmalate dehydratase, large subunit [Veillonella sp. oral
taxon 780 str. F0422]
Length = 421
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 227/393 (57%), Gaps = 35/393 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
MT+TEK +R + ++ G + +D ++ +D+ P + KKEF + K V+D ++
Sbjct: 3 MTITEKNMARHAGLAEVKAGQMIECQLDFILMNDITFPPA----KKEFEKIGKPVFDADR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ ++RDF + I +++++ +G + H+ L +
Sbjct: 59 IYLVPDHFTPNKDIKSATQAKVMRDFVRQHKITHYFEVGRMG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++G DSHTCT GA FATG+G+TDAG + GK KVP T++ VL+G+
Sbjct: 109 QGLIGPGEMIIGADSHTCTYGALNAFATGVGSTDAGVAMAEGKTWFKVPETIKVVLEGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD++L +IG+I V GA YK++EF G+ V+ ++M +R+T+CNM +EAGGK GV P
Sbjct: 169 AKWISGKDIVLDLIGKIGVDGARYKALEFHGSGVQYMTMADRLTICNMAIEAGGKCGVFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
D T +Y++ + + P EP+ +DE A + + +L P+VA PH P N ++
Sbjct: 229 YDAVTEEYIQGRITRPIEPIAADEDADYCQVVTIQLDELTPVVAYPHLPSNTHYMKDIVK 288
Query: 366 -KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF----LVPATQKVWMDVYTL 420
++ID+V IGSCT G+ ED A++F K KV F ++P +Q DVY
Sbjct: 289 EDRIQIDQVIIGSCTNGRFEDLEMCAEIF----KDRKVADFVRCIVIPGSQ----DVYNQ 340
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
V IF EAGC ++P+CG CLGG
Sbjct: 341 AVKAG----LMDIFIEAGCAV-STPTCGPCLGG 368
>gi|240146707|ref|ZP_04745308.1| 3-isopropylmalate dehydratase, large subunit [Roseburia
intestinalis L1-82]
gi|257201138|gb|EEU99422.1| 3-isopropylmalate dehydratase, large subunit [Roseburia
intestinalis L1-82]
Length = 420
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 225/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P +S G + ++D+++ +D+ P I + + + V+D++K
Sbjct: 2 GMTMTQKILAAHAGLPSVSAGQLIEADLDLVLGNDITSP--VAIHEMDKMKVDGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH++ D ++ ++ +R+F +I ++D+ ++G + H L +
Sbjct: 60 IALVLDHFVPNKDIKSAQHCKCVREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL G+
Sbjct: 110 KGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPAAIKFVLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGISFLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + PY +DE A + Y D+S L+P VA PH P+N E D
Sbjct: 230 VDNLAKEYMEAHSKRPYVVYEADEDAEYEETYTIDLSTLKPTVAFPHLPENTKTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ +D AA + GKKV + ++PATQK+++D
Sbjct: 290 IKIDQVVIGSCTNGRMDDLRVAASIL--KGKKVAKGLRVIVIPATQKIYLDAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLLKTFIEAGA-VVSTPTCGPCLGG 366
>gi|429764702|ref|ZP_19297012.1| 3-isopropylmalate dehydratase, large subunit [Clostridium celatum
DSM 1785]
gi|429187626|gb|EKY28536.1| 3-isopropylmalate dehydratase, large subunit [Clostridium celatum
DSM 1785]
Length = 419
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 225/402 (55%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ G + N+D+++ +D+ P + F+K FG V+D+EK
Sbjct: 2 GMTMTQKILAAHAGLEKVKAGQLIEANLDLVLGNDITSPVAVKEFEK-FGVK-NVFDKEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A +R+F ++ I F++I ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQCKFIREFSRDKGIVNFFEIGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TGK KVP L+F+L G+
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSALKFILKGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD++L IIG I V GA YKSMEF+G ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 SKWVSGKDVVLHIIGMIGVDGALYKSMEFIGDGLKYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL++ ++ +DE A + Y D+S L P VA PH PDN E D
Sbjct: 230 VDEKTIEYLKEHGKKEWKVYEADEDAEYDEVYEIDLSALRPTVAFPHLPDNTRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
++ID+ IGSCT G+ D A L GKKV +V + P TQK+++
Sbjct: 290 IEIDQAVIGSCTNGRISDLRVARD--LLKGKKVNKRVRCIVFPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + EAG ++P+CG CLGG A+ +++
Sbjct: 342 --EGIIKDLVEAGA-VVSTPTCGPCLGGHMGILAKGERAIST 380
>gi|432328814|ref|YP_007246958.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135523|gb|AGB04792.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Aciduliprofundum sp.
MAR08-339]
Length = 418
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 218/388 (56%), Gaps = 31/388 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MTLTEKI ++ + K ++ G+ V V +M+HD S I K F + KVWD
Sbjct: 3 MTLTEKILAKKAGKREVRAGEIVTVEPTWVMSHD----NSAAILLK-FKKTGVDKVWDPR 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KIVII DH + N +R F EQ I+ F+DI G+CH +A
Sbjct: 58 KIVIILDHTVPAPTADYANNHKSIRGFVKEQGIENFWDIN-----------TGICHQVMA 106
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G+ PG V++G DSHT T GAFG FA GIG ++ + TGK+ L+VP + +++GE
Sbjct: 107 EKGYDLPGSVIVGADSHTTTPGAFGAFAAGIGRSEVAAIWATGKIWLRVPESYEIIVNGE 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
MP + AKDL L IIG+++ +GA YK++EF G T+ +S+ RM L NM E G KNG++
Sbjct: 167 MPKGVFAKDLALHIIGDVTASGAVYKAVEFKGETIRNMSIASRMVLTNMSAEMGAKNGII 226
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
AD T +YL+ + YE ++ DE A + Y +D S L P +A PH+ DN + +
Sbjct: 227 EADEKTERYLQGRARGDYEIMHPDEDAEYERRYEYDASDLVPKIAFPHTVDNVRDIDKAE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
D++I++V++G+CT G+ ED AAK+ GK+V V + PA+ +VW +
Sbjct: 287 DIEINQVFLGTCTNGRVEDLEIAAKIL--KGKRVNPNVRMLVFPASWEVWKE-------- 336
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + +I +AG +P CG CLG
Sbjct: 337 ADERGILRILADAGA-VVMNPGCGPCLG 363
>gi|408420667|ref|YP_006762081.1| 3-isopropylmalate dehydratase, large subunit LeuC [Desulfobacula
toluolica Tol2]
gi|405107880|emb|CCK81377.1| LeuC: 3-isopropylmalate dehydratase, large subunit [Desulfobacula
toluolica Tol2]
Length = 421
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 215/385 (55%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M ++EKI + S + ++SPG+ V V VD++M HD+ + F+K G A V+D+ K+
Sbjct: 1 MNISEKILAAHSGQKRVSPGEFVNVKVDMVMAHDLTATMALKQFEK-MGAKA-VFDKTKV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+PDH++ D A LR F Q I+YF + G G+ H+ L ++
Sbjct: 59 VIVPDHFVPAKDIAAAEINKNLRSFARSQGIQYF----ECGQ------ESGIEHVILPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GA G F+TG+G+TD + TG++ KVPPT++FV G
Sbjct: 109 GLVLPGELVVGADSHTCTYGALGSFSTGMGSTDIAVAMTTGEIWFKVPPTIKFVYTGTPG 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y MEF G V+ L+M++R T+ NM +EAG K G+
Sbjct: 169 RWISGKDLILYTIGQIGVDGAIYSVMEFTGPVVDNLTMDDRFTMSNMAIEAGAKAGLFGV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+E + PYE SD A + +D++ +EP ++ PHSP+N +
Sbjct: 229 DEKTIEYVEKRAKHPYEVYASDPDAEYEKIITYDVTDMEPQISMPHSPENTVPVSKASGT 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+ IGSCT G+ D AA +F + +VP +Q+V++ +
Sbjct: 289 KIDQAVIGSCTNGRLSDLANAAAIFEGRHVHPSIRCIVVPGSQEVYLAALK--------Q 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P+CG CLGG
Sbjct: 341 GYIETFIKAGVAV-STPTCGPCLGG 364
>gi|291536289|emb|CBL09401.1| 3-isopropylmalate dehydratase, large subunit [Roseburia
intestinalis M50/1]
gi|291538838|emb|CBL11949.1| 3-isopropylmalate dehydratase, large subunit [Roseburia
intestinalis XB6B4]
Length = 420
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 225/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P +S G + ++D+++ +D+ P I + + + V+D++K
Sbjct: 2 GMTMTQKILAAHAGLPSVSAGQLIEADLDLVLGNDITSP--VAIHEMDKMKVDGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH++ D ++ ++ +R+F +I ++D+ ++G + H L +
Sbjct: 60 IALVLDHFVPNKDIKSAQHCKCVREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL G+
Sbjct: 110 KGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPAAIKFVLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGISCLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + PY +DE A + Y D+S L+P VA PH P+N E D
Sbjct: 230 VDNLAKEYMEAHSKRPYVVYEADEDAEYEETYTIDLSTLKPTVAFPHLPENTKTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ +D AA + GKKV + ++PATQK+++D
Sbjct: 290 IKIDQVVIGSCTNGRMDDLRVAASIL--KGKKVAKGLRVIVIPATQKIYLDAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLLKTFIEAGA-VVSTPTCGPCLGG 366
>gi|425435387|ref|ZP_18815842.1| 3-isopropylmalate dehydratase, LeuC subunit [Microcystis aeruginosa
PCC 9432]
gi|389680083|emb|CCH91200.1| 3-isopropylmalate dehydratase, LeuC subunit [Microcystis aeruginosa
PCC 9432]
Length = 576
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 219/401 (54%), Gaps = 33/401 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT EK+ ++AS + PG+ V+ +D+ ++HD +F +G+ A++WD +++
Sbjct: 145 MTRVEKMLAKASGNDYVKPGEGVFAKIDLALSHDAVASSVAKVFYDNYGKTAQLWDPQRV 204
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKY-------FYDIKDLGNFKANPDYKGVC 181
V++ DH+I +D R + ++ EQ +K+ +D+ G + G+C
Sbjct: 205 VLVADHFIQINDIRLDNKAPVM----YEQMVKFAQAQGCHLFDVVSPG------EAAGIC 254
Query: 182 HIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRF 241
H+ L ++G RPG ++ GTDSHTCT GA G F+TG+G TD + G + ++VPPTL F
Sbjct: 255 HVLLPEQGFIRPGMIIAGTDSHTCTYGALGAFSTGVGTTDMANIFAMGDMWIRVPPTLVF 314
Query: 242 VLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGG 301
L G +P + AKD+IL I+G++ GAT K MEF G+ +E+L ++ER+TL NM +E G
Sbjct: 315 ELSGTLPPQISAKDIILFILGKLGCGGATSKVMEFRGSIIEQLPLDERLTLANMAIECGA 374
Query: 302 KNGVVPADGTTFKYLEDKTSLPYEPV-------YSDEKASFLSEYRFDISKLEPLVAKPH 354
G++ AD T Y+ +T + +E V +D A + + Y+FD+S LEP VA+P
Sbjct: 375 MCGLIAADEVTNDYVTSRTPIGFEDVCAKRAFGIADPDAEYEAIYQFDLSHLEPQVARPP 434
Query: 355 SPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW 414
PD + +DV I + +IGSCTGGK D AA V V F+VPA+ +V
Sbjct: 435 KPDQVVNITQLEDVPITKAFIGSCTGGKLYDLAQAAAVLKDRQVAQGVDLFVVPASMEVR 494
Query: 415 MDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
L IFEE+G S CGAC+ K
Sbjct: 495 QKAEEL--------GYLAIFEESGAQILKS-GCGACINSGK 526
>gi|427412795|ref|ZP_18902987.1| 3-isopropylmalate dehydratase, large subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425715611|gb|EKU78597.1| 3-isopropylmalate dehydratase, large subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 419
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 224/389 (57%), Gaps = 29/389 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
MT+TEK +R + + GD + VD ++ +D+ P + KEF + K V+DR++
Sbjct: 3 MTMTEKNMARHAGVAAVKAGDIIECKVDAVLMNDITFPPAL----KEFRKIGKPVFDRDR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ ++RDF + I +++++ +G + H+ L +
Sbjct: 59 IYLVPDHFTPNKDIKSAEQAKVMRDFVKAEKITHYFEVGRMG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT GA G FATG+G+TDAG + G+ KVP T++ L G+
Sbjct: 109 QGLVAPGDMIIGADSHTCTYGALGAFATGVGSTDAGVAMAMGQTWFKVPETIKVELTGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD++L++IG I V GA YK++EF G V L+M +R+T+CNM +EAGGK GV P
Sbjct: 169 NRWVTGKDIVLELIGRIGVDGARYKAIEFTGDGVAHLTMADRLTICNMAIEAGGKCGVFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE-CK 366
D TT Y+ + + PV +D+ A + D++ L+P+VA PH P N E K
Sbjct: 229 YDETTKTYVTGRVKRDFTPVTADDDAVYGETVTIDLAALKPVVAFPHLPSNTHCVNEIAK 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
D+ ID+V IGSCT G+ ED AAA++F + +KV V ++P +Q V+ + +
Sbjct: 289 DISIDQVIIGSCTNGRYEDLKAAAEIF--NNRKVADFVRCIVIPGSQAVYDEAVKTGL-- 344
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +AGC S +CG CLGG
Sbjct: 345 ------VDIFVDAGCAVSTS-TCGPCLGG 366
>gi|374315443|ref|YP_005061871.1| 3-isopropylmalate dehydratase large subunit [Sphaerochaeta
pleomorpha str. Grapes]
gi|359351087|gb|AEV28861.1| 3-isopropylmalate dehydratase, large subunit [Sphaerochaeta
pleomorpha str. Grapes]
Length = 423
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 215/391 (54%), Gaps = 31/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + PG + N+D+++ +D+ P + F K FG++ KV+D+EK
Sbjct: 2 GMTMTQKILAHHANLDSVRPGQLIMANLDLVLGNDITAPVAINEFSK-FGQD-KVFDKEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D +A LR F EQ I ++D+ +G + H L +
Sbjct: 60 VALVPDHFAPNKDIKAAEQCKCLRSFAGEQGITNYFDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G++++G DSHTCT GA G F+TG+G+TD + GK KVP ++F L G
Sbjct: 110 KGLVGAGDLVIGADSHTCTYGALGAFSTGVGSTDMACGMAIGKAWFKVPTAIKFNLSGRF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KDLIL IIG I V GA Y+SMEFVG V +SM++R T+ NM +EAG KNG+ P
Sbjct: 170 SPYICGKDLILHIIGMIGVDGALYQSMEFVGEGVANMSMDDRFTVANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLE---DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D TT YLE + + YE +D A + D+S ++ V+ PH P N
Sbjct: 230 VDATTLAYLEAHCKRKPVIYE---ADSDAEYDRVIDIDLSTIKSTVSFPHLPSNTRTIDN 286
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
+VKID+V IGSCT G D AA + GKK+ V ++PATQK+W +
Sbjct: 287 VGEVKIDQVVIGSCTNGHLSDLQMAASIL--KGKKIAPWVRCIILPATQKIWKEAMH--- 341
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF ++GC ++P+CG CLGG
Sbjct: 342 -----DGLFDIFIDSGCAV-STPTCGPCLGG 366
>gi|333910684|ref|YP_004484417.1| 3-isopropylmalate dehydratase large subunit [Methanotorris igneus
Kol 5]
gi|333751273|gb|AEF96352.1| 3-isopropylmalate dehydratase large subunit [Methanotorris igneus
Kol 5]
Length = 418
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 223/403 (55%), Gaps = 41/403 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA-KVWDREK 127
MTL EKI S+ + ++ G+ + V +D+ MTHD G+ + K F E A +VWD EK
Sbjct: 1 MTLAEKILSKKLGR-EVCEGETIEVGIDLAMTHD----GTTPLTAKAFREMADRVWDPEK 55
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IVII DH + + +A I R+F EQ IKYFY P+ +G+CH L +
Sbjct: 56 IVIIFDHNVPANTVKAANMQKIAREFVKEQGIKYFY-----------PEGEGICHQVLVE 104
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH +P ++ G DSHTCT GAFG FATG G TD GF+ TGK +KVP T+R + GE
Sbjct: 105 KGHVKPNMIIAGGDSHTCTHGAFGAFATGFGATDMGFIYATGKTWIKVPKTIRVNVVGE- 163
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + KD+IL+I E+ GATY ++E+ G V R+ ME RM L NM +E G K G++
Sbjct: 164 NDRITPKDVILRICKEVGRRGATYMALEYGGEVVRRMDMEGRMVLSNMAIEMGAKVGLIE 223
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSE------YRF---DISKLEPLVAKPHSPDN 358
AD T++YL K + E + + +K + Y+F DI+ +E +A PH PDN
Sbjct: 224 ADEKTYEYLR-KVGVSEEEILNLKKNAIRVNENEEDYYKFIEIDITDMEEQIACPHHPDN 282
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMD 416
E ID+V+IGSCT G+ D AAKV GKKV V ++PA++KV++D
Sbjct: 283 VKDVSEVAGTPIDQVFIGSCTNGRLSDLRVAAKVL--KGKKVHKDVKLIVIPASKKVFLD 340
Query: 417 VYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ +IF EAG +P CG CLG + A
Sbjct: 341 ALK--------EGLIEIFIEAGA-MICTPGCGPCLGAHQGVLA 374
>gi|251779961|ref|ZP_04822881.1| 3-isopropylmalate dehydratase, large subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243084276|gb|EES50166.1| 3-isopropylmalate dehydratase, large subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 419
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 222/395 (56%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + VN+D+++ +D+ P + FKK FG + KV+++ +
Sbjct: 2 GMTMTQKILASHAGLESVKAGQLIEVNLDLVLGNDITTPVAINEFKK-FGLD-KVFNKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + IK F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYVREFSNKMGIKNFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F+L +
Sbjct: 110 KGLVVPGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGQTWFKVPSAIKFILKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWVSGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T KYL++ T ++ +DE A + +++ L P V+ PH PDN
Sbjct: 230 VDNKTVKYLKEHTVKEWKVYKADEDAEYDEVIEIELNTLRPTVSFPHLPDNTRTIDNANG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ D A + GKKVK + ++P TQK+++
Sbjct: 290 VDIDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLIEAGA-VVSTPTCGPCLGGHMGILAK 373
>gi|295091362|emb|CBK77469.1| 3-isopropylmalate dehydratase, large subunit [Clostridium cf.
saccharolyticum K10]
Length = 421
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 219/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P I + E V+D++K
Sbjct: 2 GMTMTQKILAAHAGLESVKAGQLIEADLDLVLGNDITSP--VAIAEMEKMNTQTVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N RDF I ++D+ ++G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAENCKCCRDFACRHEISNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFVLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 GKWVSGKDVILHIIGMIGVDGALYKSMEFTGDGIRNLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+++ + ++ +DE A + + Y D+S L+P V+ PH P+N E D
Sbjct: 230 VDEKAVQYMKEHSKREFQIHEADEDAEYEAVYTIDLSALKPTVSFPHLPENTKTIDEAGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ ED AA++ G+KVK V ++PATQ +++
Sbjct: 290 VAIDQVVIGSCTNGRLEDMRIAAEIL--KGRKVKKGVRCIVIPATQAIYLQCIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLMETFIEAGA-VVSTPTCGPCLGG 366
>gi|218778041|ref|YP_002429359.1| 3-isopropylmalate dehydratase large subunit [Desulfatibacillum
alkenivorans AK-01]
gi|226735957|sp|B8FMM4.1|LEUC_DESAA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|218759425|gb|ACL01891.1| 3-isopropylmalate dehydratase, large subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 419
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 222/394 (56%), Gaps = 39/394 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + + + SPGD + VDI + +D+ P + +F++ AKV+D++++
Sbjct: 3 MTIAEKILAAHAGQEEASPGDLINAKVDIALGNDITAPIAIKLFRQSGA--AKVFDKDRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ T D + V ++RDF EQ + ++Y+ D GV H L ++
Sbjct: 61 VLVPDHFTPTKDINSAMQVKMVRDFAREQELSHWYEGGD----------SGVEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + TG+V LKVP +++FV G++
Sbjct: 111 GIVGPGDLVIGADSHTCTYGGLGAFATGVGSTDLAAAMITGEVWLKVPESIKFVYKGKLR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y +MEF G ++ L M ER+T+ NM +EAGGK G++
Sbjct: 171 PHVEGKDLILHTIGDIGVDGALYMAMEFTGEVIDALPMAERLTMANMAIEAGGKAGIIAP 230
Query: 309 DGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y + + + +PV+ SD A + +D++ LEP VA PH P+N +
Sbjct: 231 DAKTKEYADGR--VIRKPVFYASDPDAKYAKVIEYDVTDLEPQVAFPHLPENTRPISQVG 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+V I +V IGSCT G+ ED +AA++ + V ++PAT +++
Sbjct: 289 EVPIHQVIIGSCTNGRIEDMRSAARILTGNKADKNVRLIIIPATPQIY------------ 336
Query: 427 GKTCSQIFEEAGCDTPAS-------PSCGACLGG 453
Q EE DT S P+CG CLGG
Sbjct: 337 ----RQAMEEGLFDTFLSAGAVISPPTCGPCLGG 366
>gi|303230887|ref|ZP_07317631.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302514400|gb|EFL56398.1| 3-isopropylmalate dehydratase, large subunit [Veillonella atypica
ACS-049-V-Sch6]
Length = 419
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 226/390 (57%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+TEK +R + + PG + ++D ++ +D+ P + +KEF + K V+DR
Sbjct: 2 GMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPA----RKEFLKIGKPVFDRH 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++RDF E I ++++ +G + H+ L
Sbjct: 58 KIYLVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHTCT GA F+TG+G+TDAG + GK KVP T++ L G+
Sbjct: 108 EKGLIGPGEMMIGADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL +IG+I V GA Y ++EF G V+ ++M +R+T+CNM +EAGGK GV
Sbjct: 168 PNKWVTGKDVILDLIGKIGVDGARYMALEFSGEGVQHMTMADRLTICNMAIEAGGKCGVF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
P D T Y++ + + EP+ D A + D+SKL+P+VA PH P N E
Sbjct: 228 PYDEITEAYIKGRVNRLVEPINPDPDAVYAQTVTIDLSKLQPVVAFPHLPSNTHYINEID 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
KD+KID+V IGSCT G+ ED +AAA++F G+KV V ++P +Q DVY +
Sbjct: 288 KDIKIDQVIIGSCTNGRYEDLVAAAEIF--KGRKVAPFVRCIVIPGSQ----DVYDQAMK 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
IF +A C ++P+CG CLGG
Sbjct: 342 DG----LLDIFIQADCAV-STPTCGPCLGG 366
>gi|332653122|ref|ZP_08418867.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcaceae
bacterium D16]
gi|332518268|gb|EGJ47871.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcaceae
bacterium D16]
Length = 420
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 220/394 (55%), Gaps = 25/394 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ + + G + VD+++ +D+ P + F+K ++V+D++KI
Sbjct: 3 MTMTQKILAKHAGLDHVEVGQLIEAKVDMVLGNDITTPVAITEFEK--AGFSQVFDKDKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DHY D ++ R+F + +I F+D+ +G V H L ++
Sbjct: 61 SIVLDHYTPCKDIKSAELCLKARNFAHKHSITNFFDVGQMG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G C PGE+++G DSHTCT GA G F+TGIG+TD + TG + KVP ++ L G++
Sbjct: 111 GLCAPGEIIVGADSHTCTYGALGAFSTGIGSTDMAAAMATGLLWFKVPAAIKVTLKGKLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL +IGEI V GA Y+S+EF G V L+M++R T+ NM +EAGGKNG+ P
Sbjct: 171 PMVSGKDVILHLIGEIGVDGALYQSLEFAGEGVSSLTMDDRFTISNMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y+ + + P E +D A ++ E D+ KLEP VA PH P+N + E +
Sbjct: 231 DEKTMEYISGRVNRPCEAFEADADAEYVREVVIDLDKLEPTVAMPHLPENTKVVSEVAGL 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
I++V IGSCT G+ D AAA V GKKV V ++PATQ++ +
Sbjct: 291 PINQVVIGSCTNGRISDLRAAAAVM--KGKKVADNVRCIVIPATQEIVLQAMK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F EAG ++P+CG CLGG A
Sbjct: 342 -EGLIETFIEAGAAV-STPTCGPCLGGHMGVMAE 373
>gi|223040023|ref|ZP_03610305.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter rectus
RM3267]
gi|222878743|gb|EEF13842.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter rectus
RM3267]
Length = 424
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 229/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ G+ + ++D+++ +D+ P S F++ K+ + +
Sbjct: 7 TITEKIFSEHVGR-EVFAGEIIESDIDMVIGNDITTPISIKQFERSGA--TKLANPDGFS 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHYI D + I RDF + ++K ++D KD+G + H L ++G
Sbjct: 64 VVMDHYIPAKDILSANQAKISRDFAYKHDLKNYFDEKDMG----------IEHALLPEKG 113
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD + + TGK KVPPT++ + G++
Sbjct: 114 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAYAMITGKNWFKVPPTIKVIFRGKLDR 173
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II I V GA YK++EF G T+E L M+ R ++CNM +EAGGK+G++ D
Sbjct: 174 HVYGKDLILEIIRHIGVDGALYKALEFTGETIENLDMDGRFSMCNMAIEAGGKSGIIAVD 233
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
TT ++L+ K +L EP YSDE A++ + D+SKL+P++A P P N RE
Sbjct: 234 ETTKEFLKGK-NLRAEPKLHYSDEGANYEQILQIDVSKLDPVIAYPFLPSNGKSVREAVK 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 293 DDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVARKTRLIITPATQKIALQAQK---- 346
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CGACLGG
Sbjct: 347 ----EGLMDIFAEAGA-VVSNPTCGACLGG 371
>gi|374629000|ref|ZP_09701385.1| 3-isopropylmalate dehydratase large subunit [Methanoplanus limicola
DSM 2279]
gi|373907113|gb|EHQ35217.1| 3-isopropylmalate dehydratase large subunit [Methanoplanus limicola
DSM 2279]
Length = 416
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 221/386 (57%), Gaps = 28/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+FS+ + S GD V VD M HD+ GP + +F++ G+ +V+D EK++
Sbjct: 4 TYVEKVFSKKCGR-DYSAGDMVMAPVDGAMIHDITGPLAINVFREMGGK--QVFDPEKVI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH I A +N ++RDF EQ I + YDIK+ GVCH + ++G
Sbjct: 61 MLFDHQIPADSIPAAKNHVMMRDFAKEQGI-FNYDIKE-----------GVCHQVVPEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG++++G DSHTC GA G F+TGIG+TD GFVL G + K+P ++R ++G+ P
Sbjct: 109 RARPGDIIVGGDSHTCAYGALGAFSTGIGSTDMGFVLKFGALYFKIPESIRLEIEGKFPR 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
AKDLIL + G+I GATYK++EF G TV + + RMT NM +E G K G+VP D
Sbjct: 169 RTGAKDLILNLAGDIGADGATYKALEFYGGTVSDMDISGRMTCANMAIEMGAKAGIVPPD 228
Query: 310 GTTFKYLEDKTSL-PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T+ YL + + P+E + DE A + +D+S L P VA PH+ DN E
Sbjct: 229 AKTWDYLSGRADVTPFE-MTGDEDAGYAEVRHYDVSGLAPKVAVPHNVDNVVDVTEVAGR 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGK-KVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
K+D+V+IGSCT G+ EDF AA+V L GK + +VPA+++ ++ V +
Sbjct: 288 KVDQVFIGSCTNGRFEDFAEAAEV-LGDGKFSDDLRVIIVPASKEEYLKVLRAGL----- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 342 ---VEKFVEAGALVEA-PCCGPCMGG 363
>gi|182419389|ref|ZP_02950641.1| 3-isopropylmalate dehydratase, large subunit [Clostridium butyricum
5521]
gi|237666577|ref|ZP_04526562.1| 3-isopropylmalate dehydratase, large subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182376720|gb|EDT74292.1| 3-isopropylmalate dehydratase, large subunit [Clostridium butyricum
5521]
gi|237657776|gb|EEP55331.1| 3-isopropylmalate dehydratase, large subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 419
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 220/395 (55%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P + FKK FG + KV+ + K
Sbjct: 2 GMTMTQKILAAHAGLECVKAGQLIEADLDLVLGNDITTPVAVNEFKK-FGTD-KVFSKSK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + I+ F++I ++G + H + +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYIREFANKMEIENFFEIGEMG----------IEHCLVPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TGK KVP L+FVL +
Sbjct: 110 KGLAVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSALKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+D ++ +DE A + Y D+S L P V+ PH PDN D
Sbjct: 230 VDEKTEEYLKDHAKREWKKYEADEDAQYDEVYEIDLSTLRPTVSFPHLPDNTRTIDNTGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A + GKKV + ++P TQK+++
Sbjct: 290 VKIDQVVIGSCTNGRISDLRVARDIL--KGKKVDKTIRCIVIPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLIEAGA-IVSTPTCGPCLGGHMGILAK 373
>gi|122953533|sp|Q0QLE2.1|DMDA_EUBBA RecName: Full=2,3-dimethylmalate dehydratase large subunit
gi|86278276|gb|ABC88408.1| 2,3-dimethylmalate dehydratase large subunit [Eubacterium barkeri]
Length = 420
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 217/389 (55%), Gaps = 28/389 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGP---GSFGIFKKEFGENAKVWDR 125
MT+T+KI + + + GD + ++D+++ +D+ GP FG KE KV+D+
Sbjct: 3 MTMTQKILAAHASLDSVKAGDLIMADLDMVLANDITGPVAINVFGTIDKE-----KVFDK 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
+KI ++PDH+ D ++ + +R F +Q I +++I ++G + H L
Sbjct: 58 DKIALVPDHFAPAKDIKSAQQCKQVRCFACDQEITNYFEIGEMG----------IEHALL 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP LRF L G
Sbjct: 108 PEKGLVAAGDVVIGADSHTCTYGALGAFSTGVGSTDMAVGMATGKAWFKVPAALRFNLTG 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ + KDLIL IIG I V GA Y+SMEF G V LSM++R T+ NM +EAGGKNG+
Sbjct: 168 TLNKNVSGKDLILHIIGMIGVDGALYRSMEFTGPGVACLSMDDRFTISNMAIEAGGKNGI 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
P D T Y+E+ S Y+ +D A + + D+S+L+ VA PH P+N
Sbjct: 228 FPVDDQTISYMEEHGSGDYKVYAADADAVYEKTFDIDLSQLKSTVAFPHLPENTKTVDAI 287
Query: 366 KD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
++ V ID+V IGSCT G+ ED AA + K V ++PAT K+++D
Sbjct: 288 EEPVTIDQVVIGSCTNGRFEDLKRAADILRGKHVKKGVRMLVIPATHKIYLDAME----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG T ++P+CG CLGG
Sbjct: 343 ---AGYLREFIEAGA-TISTPTCGPCLGG 367
>gi|399888002|ref|ZP_10773879.1| 3-isopropylmalate dehydratase large subunit [Clostridium arbusti
SL206]
Length = 418
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 226/394 (57%), Gaps = 25/394 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G V ++D+++ +D+ GP + F+K G + KV+D+ KI
Sbjct: 1 MTMTQKIIAAHAGLDYVEAGQLVNADLDLVLGNDITGPVAIKEFRK-LGLD-KVFDKNKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ + ++R+F E I ++++ ++G + H L ++
Sbjct: 59 ALVPDHFTPNKDIKSAEHCKMVREFAKEMEIVNYFEVGEMG----------IEHALLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG G+TD + TGK KVP ++FVL G+
Sbjct: 109 GLTIPGDIIIGADSHTCTYGALGAFSTGGGSTDMAVGMATGKAWFKVPEAIKFVLKGKFN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IIG I V GA YKSMEFVG V+ ++M+ R T+ NM +EAG KNG+ P
Sbjct: 169 KWVSGKDLILHIIGMIGVDGALYKSMEFVGEGVKEITMDGRFTIANMAIEAGAKNGIFPV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +Y+ +T ++ +DE A + D+S+++ V+ PH PDN E +V
Sbjct: 229 DEKAIEYVTGRTDREWKVFEADEDAEYSQVIEIDLSEVKSTVSFPHLPDNTRTIDEVGEV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KID+ IGSCT G+ ED AA++ GKKVK + ++P TQ +++
Sbjct: 289 KIDQAVIGSCTNGRIEDLRIAAEIL--KGKKVKKGMRVIILPGTQNIYLQALE------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAG ++P+CG CLGG A+
Sbjct: 340 -EGLAKIFIEAGA-VFSTPTCGPCLGGYMGILAK 371
>gi|147919249|ref|YP_687015.1| 3-isopropylmalate dehydratase large subunit [Methanocella arvoryzae
MRE50]
gi|110622411|emb|CAJ37689.1| 3-isopropylmalate dehydratase, large subunit [Methanocella
arvoryzae MRE50]
Length = 414
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 211/386 (54%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDREK 127
T++E+I S AS K + GD V VD M+HD G+ + K F E + +VWD +
Sbjct: 3 TISEEILSAASGK-KADAGDFVVARVDYAMSHD----GTSVLAVKAFREMKSERVWDPSR 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+I DH + E +R + EQ IK YD+ + G+CH L +
Sbjct: 58 IIIPFDHLAPANTENTALLQREIRQWAAEQGIKNLYDVGE-----------GICHQLLPE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSH+CT GAFG FATG+G TD + +GK+ +VP T++ +DG++
Sbjct: 107 NGFAMPGKVIVGADSHSCTYGAFGAFATGVGATDMAEIYTSGKLWFRVPETIKLTVDGKL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL+I E+ GATYK+MEF G ++ +S+ RMTLCNM +E GGK G+VP
Sbjct: 167 PAAVTPKDVILRIAKEVGSDGATYKAMEFYGPVIDHMSIAGRMTLCNMAIEMGGKAGIVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TF +L+ + Y PVY+ A + E D+SKL P V+ P DN E +
Sbjct: 227 PDEKTFAFLKGRAVEEYRPVYASRDAVYCDELHLDVSKLHPQVSCPPDVDNVKDVGEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V IGSCT G+ ED AA + G+KV+ T ++PA++ V +D V
Sbjct: 287 THVDQVLIGSCTNGRYEDLAGAAAIL--KGRKVRCRTLIIPASRSVMLDAVQTGVAAD-- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
AG T +P CG CLGG
Sbjct: 343 ------LLAAGA-TICNPGCGPCLGG 361
>gi|310828324|ref|YP_003960681.1| 2,3-dimethylmalate dehydratase large subunit [Eubacterium limosum
KIST612]
gi|308740058|gb|ADO37718.1| 2,3-dimethylmalate dehydratase large subunit [Eubacterium limosum
KIST612]
Length = 420
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 223/388 (57%), Gaps = 26/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + PGD + ++D+++ +D+ P + +FK E V+D++K+
Sbjct: 3 MTMTQKILAAHAGLESVKPGDLIMADLDLVLGNDITSPVAINVFKNINKET--VFDKDKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D +A +R F EQ++ +++I ++G V H L ++
Sbjct: 61 ALVPDHFAPNKDIKAAEQCKQVRCFACEQDVTNYFEIGEMG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G
Sbjct: 111 GLVVAGDVVIGADSHTCTYGALGAFSTGVGSTDMAVGMATGKAWFKVPSAIKFNLTGAFK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KDLIL IIG I V GA YKSMEF G V L+M++R T+ NM +EAGGKNG+ P
Sbjct: 171 EGVSGKDLILHIIGMIGVDGALYKSMEFAGEGVSSLTMDDRFTIANMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y+++ ++ Y+ +D A + + Y +++ ++ VA PH P+N E +
Sbjct: 231 DDKTIEYMKEHSTKEYKAFEADADAEYDAVYDINLADIKSTVAFPHLPENTKTVDEITEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ DF AA L GK V + ++PATQ++++D
Sbjct: 291 VKIDQVVIGSCTNGRFSDFKKAAD--LMRGKHVAKGIRVLIIPATQQIYLDCME------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG T ++P+CG CLGG
Sbjct: 343 --AGYLKDFIEAGA-TVSTPTCGPCLGG 367
>gi|255322890|ref|ZP_05364031.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter showae
RM3277]
gi|255300101|gb|EET79377.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter showae
RM3277]
Length = 424
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 228/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ G+ + ++D+++ +D+ P S F++ K+ + +
Sbjct: 7 TITEKIFSEHVGR-EVFAGEIIESDIDMVIGNDITTPISIKQFERSGA--TKLANPDGFS 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHYI D + I RDF + ++K ++D KD+G + H L ++G
Sbjct: 64 VVMDHYIPAKDILSANQAKISRDFAYKHDLKNYFDEKDMG----------IEHALLPEKG 113
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD + + TGK KVPPT++ + G++
Sbjct: 114 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAYAMITGKNWFKVPPTIKVIFRGKLDR 173
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II I V GA YK++EF G T+E L M+ R ++CNM +EAGGK+G++ D
Sbjct: 174 HVYGKDLILEIIRRIGVDGALYKALEFTGETIENLDMDGRFSMCNMAIEAGGKSGIIAVD 233
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
TT ++L+ K +L EP YSDE A++ D+SKL+P++A P P N RE
Sbjct: 234 ETTKEFLKGK-NLRAEPKLHYSDEGANYEQILEIDVSKLDPVIAYPFLPSNGKSVREAVR 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 293 DDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVARKTRLIITPATQKIALQAQK---- 346
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CGACLGG
Sbjct: 347 ----EGLMDIFAEAGA-VVSNPTCGACLGG 371
>gi|150402648|ref|YP_001329942.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C7]
gi|150033678|gb|ABR65791.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C7]
Length = 418
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 219/394 (55%), Gaps = 37/394 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K + GD+V ++VDI MTHD P + F++ + KVWD EKI
Sbjct: 1 MTLAEKIISKNVGK-NVYAGDSVEIDVDIAMTHDGTTPLTVKAFEQI---SDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH I + +A I R+F + IK +Y D +G+CH L ++
Sbjct: 57 VIIFDHNIPANTSKAANMQVITREFIKKHGIKNYY-----------LDGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD GFV TGK L+VP T+R + GE
Sbjct: 106 GHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGFVYATGKTWLRVPETIRVNVTGENE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ E+ +GATY S+E+ G V+ L M ERM L NM +E GGK G++ A
Sbjct: 166 N-ISGKDIILKTCKEVGRSGATYMSLEYGGNAVQNLEMNERMVLSNMAIEMGGKAGIIEA 224
Query: 309 DGTTFKYLEDK-------TSLPYEPVYSDE-KASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT+KYLE+ +L + +E + ++ FDI+ +E +A PH+PDN
Sbjct: 225 DDTTYKYLENAGVSREEILNLKKNKITVNESEENYYKTIEFDITDMEEQIACPHNPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVWMDVY 418
E ++D+V+IGSCT G+ D AAK GKKV T L +PA++ ++
Sbjct: 285 GVSEVSGTELDQVFIGSCTNGRLNDLRIAAKYL--KGKKVNENTRLIVIPASKSIF---- 338
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G+ + IF E+G +P CG CLG
Sbjct: 339 ----AGALKEGLIDIFVESGA-LICTPGCGPCLG 367
>gi|346312086|ref|ZP_08854080.1| 3-isopropylmalate dehydratase [Collinsella tanakaei YIT 12063]
gi|345899180|gb|EGX69031.1| 3-isopropylmalate dehydratase [Collinsella tanakaei YIT 12063]
Length = 427
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 217/385 (56%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + ++ PG V ++DI++ +D+ P + +F+ E G +V+DR+++
Sbjct: 5 MTVAEKILAAHAGLDEVRPGQLVECDLDIVLANDITAPIAIDVFR-ELGAQ-RVFDRDRV 62
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDHY D ++ +RDF EQ I ++++ G+ H L +
Sbjct: 63 CLVPDHYAPNKDIKSAEQTKKMRDFAHEQKITHYWE----------QGCAGIEHALLPET 112
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG G+TDAG L TG+ KVPPT+RF +DGE+P
Sbjct: 113 GTVVPGDLIIGADSHTCTYGALGAFSTGAGSTDAGVGLATGRAWFKVPPTIRFEIDGELP 172
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
AKD+IL IIG I V GA Y+ MEF G+T+E LSME RMT+ NM +EAGGK G++
Sbjct: 173 AGASAKDIILHIIGLIGVDGALYQVMEFAGSTIEALSMEGRMTISNMAIEAGGKAGIIEV 232
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +L+ + Y ++D A + D + ++P V+ PH P N E + +
Sbjct: 233 DDVARAWLDGRCQREYVEYHADADAEYARVVHIDAADIKPCVSWPHLPSNTHPVEESRHI 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+ IGSCT G+ ED AAA++ V ++PATQ V+ +
Sbjct: 293 SIDQAVIGSCTNGRIEDMRAAAQIMRGRSVAPGVRCIVIPATQAVFKQCMA--------E 344
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AGC ++P+CG CLGG
Sbjct: 345 GLADTFIDAGC-VFSTPTCGPCLGG 368
>gi|154485058|ref|ZP_02027506.1| hypothetical protein EUBVEN_02781 [Eubacterium ventriosum ATCC
27560]
gi|149734011|gb|EDM50130.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium
ventriosum ATCC 27560]
Length = 421
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 221/401 (55%), Gaps = 23/401 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+T+KI ++ + ++ G + N+D+++ +DV P + G KK N V+ ++
Sbjct: 2 GMTMTQKILAKHAGLDEVKAGQLIEANLDLVLGNDVTAPVAIGEMKKM---NVDCVFCKD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D ++ ++DF E I +++ +G + H L
Sbjct: 59 KIALVPDHFTPNKDIKSAELYKCVKDFAEENQITNYFETGRVG----------IEHALLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 109 EKGLVVAGDVVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKFNLTGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KD+IL IIG I V GA Y+SMEFVG ++ LSM++R + NM +EAGGKNG+
Sbjct: 169 PAKWVSGKDVILHIIGLIGVDGALYRSMEFVGDGIKYLSMDDRFAMTNMAIEAGGKNGIF 228
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T +Y+++ ++ Y +DE A + EY D+S L P VA PH P+N E
Sbjct: 229 PVDDLTIEYMKEHSTKEYTVYEADEDAEYDEEYTIDLSTLRPTVAFPHLPENTRTIDEVG 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
DVKID+V IGSCT G+ ED AAK+ V + PATQ +++
Sbjct: 289 DVKIDQVVIGSCTNGRIEDMRTAAKILEGREVAKGVRCIVFPATQAIYLQCIE------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ F +AGC ++P+CG CLGG A+ +A+
Sbjct: 342 -EGIMTTFIKAGC-AVSTPTCGPCLGGHMGILAKGERAVAT 380
>gi|282164631|ref|YP_003357016.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
gi|282156945|dbj|BAI62033.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
Length = 412
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 213/384 (55%), Gaps = 27/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TE+I RAS K + GD + VD M+HD + FK E KVWD +I+
Sbjct: 3 TITEEILGRASGK-KAHAGDFIIARVDYAMSHDGTSVLAVKAFKDMLVE--KVWDPGRII 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH ++E LR++ Q I + YD+ + G+CH +A++G
Sbjct: 60 IPFDHLAPANNETTALLQKELREWAAAQKISHLYDVGE-----------GICHQVMAEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSH+CT GAFG F TG+G TD + +GK+ +VP T+ +DG P
Sbjct: 109 FALPGKVIVGADSHSCTYGAFGAFGTGVGATDMAEIYASGKLWFRVPETIEVTVDGRFPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+ L+II +I GA YK++EF GTT+E +SM RMTLCNM +E G K G+VP D
Sbjct: 169 GVTAKDITLRIIKDIKTDGAAYKALEFYGTTIEAMSMSGRMTLCNMAIEMGAKAGIVPPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL+D+++ PY PV +++ ++ Y FD S + P VA P DN E +
Sbjct: 229 AKTGAYLKDRSAEPYSPVIANDP-TYCDSYHFD-SNISPQVACPIDVDNVHDIEEVEGTH 286
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V IGSCT G+ ED +AA + G+KVK T ++PA++ V ++ + +
Sbjct: 287 VDQVLIGSCTNGRLEDLESAASIL--KGRKVKCRTLVIPASRSVMLEAVNSGIAAT---- 340
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
AG T +P CG CLGG
Sbjct: 341 ----LLSAGA-TICNPGCGPCLGG 359
>gi|398810281|ref|ZP_10569108.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Variovorax sp. CF313]
gi|398083355|gb|EJL74066.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Variovorax sp. CF313]
Length = 430
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 218/395 (55%), Gaps = 26/395 (6%)
Query: 60 ATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN 119
A T + A TL +K+ +RAS + ++S G+ V VD+ M HD GP +E G
Sbjct: 5 APTRAQTQAQTLAQKLIARASGRERVSVGEIVTCGVDLAMFHDSSGPRRLKPMLEELG-- 62
Query: 120 AKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKG 179
A++WDR ++V++ DHY+ D+ + R V I RD+ +Q + + YD +G
Sbjct: 63 AQIWDRSRVVLVMDHYVPERDDDSRRIVRIARDWARDQQLPHVYD------------SQG 110
Query: 180 VCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTL 239
+CH+ + Q GH RPG + +G DSH+ T GAFG + GIG+T+ V+ TG++ L+VP T+
Sbjct: 111 ICHVVVPQHGHIRPGMLCVGGDSHSPTGGAFGAYMFGIGSTEMLGVMVTGEIWLRVPETI 170
Query: 240 RFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEA 299
R DG +P + AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E
Sbjct: 171 RMWWDGALPAGVTAKDMMLHMIGRFGMNGGRYQAVEFAGPAVAALSMQERMTLSNMSAEL 230
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYE--PVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
G + G++ D TT ++L + P + P ++DE A+ L+++RFD S LEP VA PHSP
Sbjct: 231 GAQAGLIAPDATTAEFLVGAGAPPVDMAPWFTDEDAA-LTDHRFDASTLEPYVAAPHSPA 289
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV 417
N +D YIG+CTG K +D AAA+V + + PA+ +
Sbjct: 290 NAHGVSRYVGTHVDVAYIGACTGAKLDDLRAAAQVLRGHKVASGIRLIVAPASIRDQEQA 349
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q+ +AG + + +CGAC G
Sbjct: 350 RE--------EGVLQVLMDAGAELFPT-ACGACSG 375
>gi|339443472|ref|YP_004709477.1| hypothetical protein CXIVA_24080 [Clostridium sp. SY8519]
gi|338902873|dbj|BAK48375.1| hypothetical protein CXIVA_24080 [Clostridium sp. SY8519]
Length = 418
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 219/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P I + E + V+ ++K
Sbjct: 2 GMTMTQKILAAHAGLDSVEAGQLIEADLDLVLGNDITSP--VAIHEIEKMKVDGVFHKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH++ D ++ + +R+F I F+D+ +G + H L +
Sbjct: 60 IALVMDHFVPNKDIKSAEHTKCVREFACRNQITNFFDVGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G + G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP +RF L G+
Sbjct: 110 QGLVKAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIRFELTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL IIG I V GA YKSMEF G ++ L+M++R ++ NM +EAGGKNG+ P
Sbjct: 170 SRYVCGKDVILHIIGRIGVDGALYKSMEFTGDGIQYLNMDDRFSIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL++ + Y +DE A + Y D+S+L+P V+ PH P+N E D
Sbjct: 230 VDDITRAYLKEHCAQEYTEYTADEDAVYEETYTIDLSELKPTVSFPHLPENTRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
V+ID+V IGSCT G D AA++ GKKV V T ++PATQ++++
Sbjct: 290 VRIDQVVIGSCTNGHISDLRMAAEIM--KGKKVSDHVRTIIIPATQEIYLQAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 --EGLLKIFIEAGA-VVSTPTCGPCLGG 366
>gi|359410167|ref|ZP_09202632.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
DL-VIII]
gi|357169051|gb|EHI97225.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
DL-VIII]
Length = 419
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 222/395 (56%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+D+++ +D+ P + FKK FG + KV+ + +
Sbjct: 2 GMTMTQKILAVHAGLESVKAGQLIEANLDLVLGNDITTPVAVNEFKK-FGTD-KVFSKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYIREFAQKMEIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G V++G DSHTCT GA G F+TGIG+TD + TGK KVP L+FVL +
Sbjct: 110 KGLVVAGNVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSALKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWVSGKDVILHIIGMIGVDGALYKSMEFVGDGLQYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL++ ++ + +DE A + + D+S L P V+ PH PDN + +
Sbjct: 230 VDDKTIEYLKEHSTKEWTAYEADEDAEYDKVFEIDLSALRPTVSFPHLPDNTRTIDDTGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ D A + GKKVK + ++P TQK+++
Sbjct: 290 VVIDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLVEAGA-VFSTPTCGPCLGGHMGILAK 373
>gi|330506688|ref|YP_004383116.1| 3-isopropylmalate dehydratase large subunit 1 [Methanosaeta
concilii GP6]
gi|328927496|gb|AEB67298.1| 3-isopropylmalate dehydratase large subunit 1 [Methanosaeta
concilii GP6]
Length = 415
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 219/386 (56%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLS-PGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDRE 126
T+++KI SRAS ++ PG+ V +D M+HD G+ + + F E + KVWD +
Sbjct: 3 TISQKILSRASGYDGMAEPGEIVEAEIDYAMSHD----GTSVLAIRSFREMGSEKVWDPD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++V+ DH + ++E A +R++ EQNI +F+D GVCH
Sbjct: 59 RVVVPYDHIVPANNETAADLQREVRNWAREQNISHFFDCG-----------TGVCHQVFP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG +L+G DSH+CT GAFG F TG+G TD + G++ +VP T+ ++G
Sbjct: 108 EQGFALPGTLLVGADSHSCTYGAFGAFGTGVGATDMAEIYSAGRLWFRVPETIGIKVEGR 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++ AKD+ LQ+IG++ GATYK++E++G +E LS+ RMTLCN+ VE G K +V
Sbjct: 168 LAPFVSAKDIALQVIGDLGADGATYKAVEYIGPAIEGLSISGRMTLCNLGVEMGAKAAIV 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T ++L + PY V+SD S+ +Y +DI++LEP VA P DN E
Sbjct: 228 PPDEKTDEWLRGRARQPYTQVFSDPD-SYQQQYDYDIAELEPQVAAPFRVDNVRPVSELA 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+KID+ +IG+CT G+ ED AAA + GKKV+ T ++PA+++V +D
Sbjct: 287 GLKIDQAFIGTCTNGRLEDLEAAAGIL--KGKKVRARTLVIPASREVLLDALK------- 337
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG P CG CLG
Sbjct: 338 -RGIIQTLVEAGA-MIGPPGCGPCLG 361
>gi|420157389|ref|ZP_14664225.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
MSTE9]
gi|394756304|gb|EJF39409.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
MSTE9]
Length = 427
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 223/390 (57%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + PQ++ G V ++D+++ +D+ P + F+K ++ ++K
Sbjct: 2 GMTMTQKILAAKAGLPQVTAGQLVEASLDLVLGNDITSPVAINEFEKSGATG--IFHKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D +A R+F + +I F+D+ +G + H L +
Sbjct: 60 IALVLDHFTPNKDIKAAEQCRQTRNFADKYDITNFFDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP +R VL+G+
Sbjct: 110 QGLVGPGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMITGKAWFKVPGAIRVVLNGKC 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ KD+IL +IG+I V GA Y+S+EF G V+ LSM++R+ + NM +EAG KNG+ P
Sbjct: 170 PKWVSGKDVILHLIGKIGVDGALYQSLEFTGEGVKSLSMDDRLCIANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T Y +D+ EPV +DE A + SE D+S L P +A PH P+N E
Sbjct: 230 VDEITLAYCKDR--FQREPVIYTADEDAQYDSEIVIDLSTLRPTIAFPHLPENTRTIDEA 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
VKID+ IGSCT G+ ED AAA++ G+KV +V ++P TQ +++
Sbjct: 288 GTVKIDQAVIGSCTNGRMEDLRAAAEIL--KGRKVNKRVRCIIIPGTQSIYLQAIR---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++IF EAG ++P+CG CLGG
Sbjct: 342 ----EGLAEIFVEAGA-VFSTPTCGPCLGG 366
>gi|392393555|ref|YP_006430157.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524633|gb|AFM00364.1| 3-isopropylmalate dehydratase, large subunit [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 421
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 223/403 (55%), Gaps = 26/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + ++ PG V +D+ + +D+ GP S F+K FG VWD+ K
Sbjct: 2 GMTITEKILAEHAGLDRVVPGQLVTAQLDLALANDITGPVSIREFEK-FGVET-VWDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + LR+F +Q I ++++ +G V H L +
Sbjct: 60 VALVPDHFTPNKDIASAELSKTLREFAKKQGIVHYWEQGRVG----------VEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG+V++G DSHTCT GA G FATG+G+TD + TG+ +VP +++F+ G
Sbjct: 110 QGVTLPGDVIIGADSHTCTYGALGAFATGVGSTDLAAGMATGEAWFRVPESIKFIFKGTH 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KDLIL IG+I V GA Y++MEF G + LSM+ R+T+CNM VEAG KNG++
Sbjct: 170 FQPWVSGKDLILYAIGKIGVDGARYRAMEFTGEGIAALSMDGRLTMCNMAVEAGAKNGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T Y+ ++ PY+ +SD A + Y +D++ + VA PH P+N E K
Sbjct: 230 APDEKTLAYVNERAKRPYKVYHSDPNAQYEEVYEWDVADIPLQVAFPHLPENSKPVGEGK 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+KID+V IGSCT G+ ED AA + G+KV V ++P TQ+++
Sbjct: 290 GIKIDQVVIGSCTNGRLEDLQVAAHIL--KGQKVHGDVRLIVIPGTQEIYKQAMK----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +++
Sbjct: 343 ---EGLLDIFIDAGA-VVSTPTCGPCLGGYMGILAKGERALST 381
>gi|239813807|ref|YP_002942717.1| 3-isopropylmalate dehydratase large subunit [Variovorax paradoxus
S110]
gi|239800384|gb|ACS17451.1| homoaconitate hydratase family protein [Variovorax paradoxus S110]
Length = 429
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 197/343 (57%), Gaps = 17/343 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RAS + Q++ G+ V VD+ M HD GP +E G A++WDR ++V
Sbjct: 14 TLAQKLIARASGRAQVAVGEIVTCGVDMAMFHDSSGPRRLQPMLEELG--AQIWDRSRVV 71
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ D+ + R V I RD+ EQ + + YD +G+CH+ + Q G
Sbjct: 72 LVMDHYVPERDDDSRRIVRIARDWAREQQLPHVYD------------SQGICHVVVPQHG 119
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG + +G DSH+ T GAFG + GIG+T+ V+ TG++ L+VP T+R DG +P
Sbjct: 120 HIRPGMLCVGGDSHSPTGGAFGAYMFGIGSTEMLGVMVTGEIWLRVPETIRMWWDGALPA 179
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E G + G++ D
Sbjct: 180 GVTAKDMMLHMIGRFGMNGGRYQAVEFAGPAVAALSMQERMTLSNMSAELGAQAGLIAPD 239
Query: 310 GTTFKYLEDKTSLPYE--PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
TT +L + P + P ++DE A+ L+ +RFD + LEP VA PHSP N
Sbjct: 240 ATTAAFLAQAGAPPVDMAPWFTDEGAA-LTHHRFDAAALEPYVAAPHSPANAHGVSRYVG 298
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
+D YIG+CTG K +D AAA+V + + PA+
Sbjct: 299 THVDLAYIGACTGAKLDDLRAAAQVLRGHKVAAGIRLIVAPAS 341
>gi|404372575|ref|ZP_10977870.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
7_2_43FAA]
gi|226911288|gb|EEH96489.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
7_2_43FAA]
Length = 424
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 220/402 (54%), Gaps = 25/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDR 125
MT+T+KI + + + G + N+D+++ +D+ P + KEF + KV+++
Sbjct: 2 GMTMTQKILAAHAGLESVKAGQLIEANLDLVLGNDITSP----VAVKEFNKLNLDKVFNK 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
+KI I+PDH+ D +A ++R+F E+ I F+++ ++G + H +
Sbjct: 58 DKIAIVPDHFTPNKDIKAAEQCKLIREFAREKEITNFFEVGEMG----------IEHCLI 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G G+V++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL
Sbjct: 108 PEKGLAVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSAIKFVLKN 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ ++ KD+IL IIG I V GA Y+SMEFVG ++ LS+++R T+ NM +EAGGKNG+
Sbjct: 168 KPSKWVSGKDVILHIIGMIGVDGALYRSMEFVGNGLKYLSIDDRFTMANMAIEAGGKNGI 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
P D T +YL D ++ +DE A + Y D+SKL P VA PH PDN E
Sbjct: 228 FPVDDVTIRYLVDHAQREWKVYEADEDAEYDEVYEIDLSKLRPTVAFPHLPDNTRTIDEV 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+V +D+V IGSCT G+ D A + K V + P TQK+++
Sbjct: 288 GEVAVDQVVIGSCTNGRISDLRVARDILKNKKVKKGVRCIVFPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + EAG ++P+CG CLGG A+ +++
Sbjct: 342 --EGIIKDLVEAGA-VVSTPTCGPCLGGHMGILAKGERAIST 380
>gi|225573486|ref|ZP_03782241.1| hypothetical protein RUMHYD_01678 [Blautia hydrogenotrophica DSM
10507]
gi|225039135|gb|EEG49381.1| 3-isopropylmalate dehydratase, large subunit [Blautia
hydrogenotrophica DSM 10507]
Length = 422
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 223/389 (57%), Gaps = 26/389 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P I + E V+D++K
Sbjct: 2 GMTMTQKILAAHAGLDYVEAGQLIEADLDLVLGNDITSP--VAIHEMEKMTVDTVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+I D ++ + +R+F +I ++D+ ++G + H L +
Sbjct: 60 VALVMDHFIPNKDIKSAEHCKCVREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVPP ++F L G+
Sbjct: 110 KGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPPAIKFHLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 SKWVSGKDVILHIIGMIGVDGALYKSMEFVGDGIQHLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
D Y+ + + ++ +DE A + EY D+S+L+P +A PH P+N R +
Sbjct: 230 VDDLAVAYMREHSKREFKIYEADEDAVYEEEYTIDLSQLKPTIAFPHLPENTRTIDEITA 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
DV ID+ IGSCT G+ ED AA++ G+KVK + ++PATQ +++
Sbjct: 290 DVVIDQSVIGSCTNGRMEDLRIAAEIL--KGRKVKKGIRCIVIPATQAIYLQAMK----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 343 ---EGLLEIFIEAGA-VVSTPTCGPCLGG 367
>gi|222099088|ref|YP_002533656.1| 3-isopropylmalate dehydratase large subunit [Thermotoga neapolitana
DSM 4359]
gi|221571478|gb|ACM22290.1| 3-isopropylmalate dehydratase large subunit 2 [Thermotoga
neapolitana DSM 4359]
Length = 417
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 226/388 (58%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + + ++ G+ + + DI + +D+ GP + FK+ G+ K DR +
Sbjct: 1 MTLAEKILSKKAGR-KVETGEFLLLEPDIALANDITGPLAIKKFKEYGGKRVKYPDR--V 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +E
Sbjct: 58 VLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD-AGFVLGTGKVLLKVPPTLRFVLDGEM 247
G + G++++G DSHTCT GA G FATG+G+TD AGF L GKV L+VP +++ L G+
Sbjct: 108 GIVKSGDLVVGADSHTCTYGALGAFATGVGSTDIAGFYL-IGKVWLRVPESIKVTLYGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + AKDL+L++I + V GA YK++EF G V+ +SM+ R T+ NM +EAGGK G+ P
Sbjct: 167 NEMVTAKDLVLKLISILGVDGANYKAIEFSGPGVKEISMDGRFTISNMAIEAGGKTGLFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TT Y E + + E +Y DE A ++ E ++S+LEP VA P P N E +
Sbjct: 227 VDETTIAY-EKERGIEVEEMYPDEDAEYVKEVEMNLSELEPQVAYPFLPSNTKDISESEK 285
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA++ V ++P +QKV+
Sbjct: 286 ERIKIDQVVIGSCTNGRIEDLRLAAQILKGRTVSPNVRCIIIPGSQKVYKQALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC ++P+CG CLGG
Sbjct: 340 --EGLIDIFLDAGCAV-STPTCGPCLGG 364
>gi|15679626|ref|NP_276743.1| 3-isopropylmalate dehydratase large subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122332|sp|O27668.1|LEUC2_METTH RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|2622758|gb|AAB86104.1| 3-isopropylmalate dehydratase, LeuC subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 428
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 214/419 (51%), Gaps = 37/419 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFK--KEFGENAKVWDRE 126
M +TEKI + A+ +++PG+ + VD+ MTHD P + F+ G A+VWD E
Sbjct: 4 MNMTEKILAEAAGLREVTPGEIIEARVDLAMTHDGTSPPTIRTFRDIASRGGPARVWDPE 63
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+IV++ DH + + A + R+F EQ I + + G+CH L
Sbjct: 64 RIVMVFDHNVPANTIGAAEFQRVTREFAREQGIVNIFQ-----------NAAGICHQVLP 112
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G RPG V++G DSHTCT GAFG FATG+G TD V TGK VP +R + GE
Sbjct: 113 ERGFVRPGMVIVGADSHTCTYGAFGAFATGMGATDMAMVFATGKTWFMVPEAMRIEVTGE 172
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ AKD+IL IIGEI V GATY+S+EF G T+E + + RMT+CNM VE G KNG++
Sbjct: 173 PEGHVYAKDVILHIIGEIGVDGATYRSVEFTGDTIESMDVSGRMTICNMAVEMGAKNGIM 232
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+ T Y+ +T + SDE + +L ++ FD+S LEP VA P DN +
Sbjct: 233 EPNRQTLDYVRARTGREFRVYSSDEDSQYLEDHHFDVSDLEPQVACPDDVDNVYPVHRVE 292
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
ID ++GSCT G+ ED AA+V V + PA++++++
Sbjct: 293 GTHIDEAFLGSCTNGRYEDLKIAAEVIGDRRVHEDVRFIVSPASREIYLKALE------- 345
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA---------------RMNEPMASLCL 470
+ F AG +P CG CLG A RM +P +S+ L
Sbjct: 346 -DGIIETFIRAGA-IVCNPGCGPCLGAHMGVLAPGEVSIATTNRNFRGRMGDPASSVYL 402
>gi|451817147|ref|YP_007453348.1| 3-isopropylmalate dehydratase large subunit LeuC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783126|gb|AGF54094.1| 3-isopropylmalate dehydratase large subunit LeuC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 419
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 220/395 (55%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+D+++ +D+ P + FKK FG + KV+ + +
Sbjct: 2 GMTMTQKILAAHAGLETVKAGQLIEANLDLVLGNDITTPVAVNEFKK-FGTD-KVFSKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYIREFAQKMEIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + GK KVP L+FVL +
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMAIGKCWFKVPSALKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG +E LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGLEYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL++ + ++ +DE A + D+S L P V+ PH PDN D
Sbjct: 230 VDDKTIEYLKEHATREWKVYEADEDAEYDEVIEIDLSTLRPTVSFPHLPDNTRTIDNTGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V +D+V IGSCT G+ D A + GKKVK + ++P TQK+++
Sbjct: 290 VVVDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLVEAGA-VFSTPTCGPCLGGHMGILAK 373
>gi|254168381|ref|ZP_04875226.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|289595807|ref|YP_003482503.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197622662|gb|EDY35232.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|289533594|gb|ADD07941.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 418
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 219/388 (56%), Gaps = 31/388 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MTLTEKI ++ + K ++ PG+ V V +M+HD S I K F + KVW+ +
Sbjct: 3 MTLTEKILAKKAGKKEVQPGEIVTVEPTWVMSHD----NSAAILLK-FKKTGVKKVWNPK 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KIVII DH + N +R+F EQ I+ F+DI G+CH +A
Sbjct: 58 KIVIILDHTVPAPTADYANNHKSIREFVKEQGIENFWDIN-----------TGICHQVMA 106
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G+ PG V++G DSHT T GAFG FA GIG ++ + TGK+ L+VP + +++G+
Sbjct: 107 EKGYDLPGAVIVGADSHTTTPGAFGAFAAGIGRSEVAAIWATGKIWLRVPESYEIIVNGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P + AKDL L I+G+++ +GA YK++EF G T++ +++ RM L NM E G KNG++
Sbjct: 167 LPKGVFAKDLALHIVGDVTASGAVYKAVEFKGETIKDMTIASRMVLTNMSAEMGAKNGII 226
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
AD T YL+ + PYE ++ DE A + Y +D S L P +A PH+ DN + +
Sbjct: 227 EADEKTEAYLKTRARAPYEIMHPDEDAEYERRYEYDASDLVPKIAFPHTVDNVYDIDKAE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+++++V++G+CT G+ ED AA++ GKKV V + PA+ VW +
Sbjct: 287 GIEVNQVFLGTCTNGRVEDLEIAARIL--KGKKVNKNVRMLVFPASWDVWRE-------- 336
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ K + EAG +P CG CLG
Sbjct: 337 ADEKGILRTLAEAGA-VIMNPGCGPCLG 363
>gi|410728026|ref|ZP_11366219.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
Maddingley MBC34-26]
gi|410597586|gb|EKQ52197.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
Maddingley MBC34-26]
Length = 419
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 219/395 (55%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+D+++ +D+ P + FKK FG + KV+ + +
Sbjct: 2 GMTMTQKILAAHAGLETVKAGQLIEANLDLVLGNDITTPVAVNEFKK-FGAD-KVFSKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D + V +R+F + I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDINSAEQVKYIREFADKMEIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + GK KVP L+FVL +
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMAIGKCWFKVPSALKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWISGKDIILHIIGMIGVDGALYKSMEFVGDGLQYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+D S ++ +DE A + + D+S L P V+ PH PDN D
Sbjct: 230 VDDKTVEYLKDHASREWKVYEADEDAEYDEVFEIDLSTLRPTVSFPHLPDNTRTIDNTGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V +D+V IGSCT G+ D A + GKKVK + ++P TQK+++ +
Sbjct: 290 VAVDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQKIYLQAIKEGIVTD 347
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
EAG ++P+CG CLGG A+
Sbjct: 348 --------LVEAGA-AFSTPTCGPCLGGHMGILAK 373
>gi|188587921|ref|YP_001919738.1| 3-isopropylmalate dehydratase large subunit [Clostridium botulinum
E3 str. Alaska E43]
gi|226735953|sp|B2UYH6.1|LEUC_CLOBA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|188498202|gb|ACD51338.1| 3-isopropylmalate dehydratase, large subunit [Clostridium botulinum
E3 str. Alaska E43]
Length = 419
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 222/395 (56%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + VN+D+++ +D+ P + FKK FG + KV+++ +
Sbjct: 2 GMTMTQKILASHAGLESVKAGQLIEVNLDLVLGNDITTPVAINEFKK-FGVD-KVFNKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYVREFSNKMGIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F+L +
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGQTWFKVPSAIKFILKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWVSGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL++ T ++ +DE A + D+S L+P V+ PH PDN
Sbjct: 230 VDDKTVEYLKEHTEKEWKIYEADEDAEYDEVIEIDLSTLKPTVSFPHLPDNTRTIDNANR 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V ID+V IGSCT G+ D A + GKKVK + ++P TQK+++
Sbjct: 290 VNIDQVVIGSCTNGRISDLRIARGIL--KGKKVKKGIRCIVIPGTQKIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLIEAGA-VVSTPTCGPCLGGHMGILAK 373
>gi|403252292|ref|ZP_10918602.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. EMP]
gi|402812305|gb|EJX26784.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. EMP]
Length = 417
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 223/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + + ++ PG+ + + DI + +D+ P + FK+ G+ K DR +
Sbjct: 1 MTLAEKILSQKAGR-KVEPGEFLLLEPDIALANDITAPLAIKKFKEYGGKKVKYPDR--V 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +E
Sbjct: 58 VLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD-AGFVLGTGKVLLKVPPTLRFVLDGEM 247
G + G++++G DSHTCT GA G FATG+G+TD AGF L GKV +VP +++ L G+
Sbjct: 108 GIVKSGDLVVGADSHTCTYGALGAFATGVGSTDIAGFYL-IGKVWFRVPESIKVTLRGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKDL+L++I + V GA YK++EF G V+ +SM+ R T+ NM +EAGGK G+ P
Sbjct: 167 KDLVTAKDLVLKLISILGVDGANYKAIEFSGPGVKEISMDGRFTISNMAIEAGGKTGLFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y E + + E +Y DE A ++ E D+S+LEP VA P P N E +
Sbjct: 227 VDEITIAY-EKERGIEVEEMYPDEDAKYVREVEMDLSELEPQVAYPFLPSNAKDVSEAEK 285
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G+ ED AA++ V ++P +QKV+
Sbjct: 286 ERIKIDQAVIGSCTNGRIEDLRLAAQILKGRTVSPDVRCIIIPGSQKVYKQALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC ++P+CG CLGG
Sbjct: 340 --EGLIDIFIDAGCAV-STPTCGPCLGG 364
>gi|91774182|ref|YP_566874.1| 3-isopropylmalate dehydratase large subunit [Methanococcoides
burtonii DSM 6242]
gi|91713197|gb|ABE53124.1| Homoaconitase large subunit [Methanococcoides burtonii DSM 6242]
Length = 413
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 219/385 (56%), Gaps = 27/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFS+AS K + + V VD M HD + FK EN VWD ++IV
Sbjct: 3 TISEKIFSKASGK-DVKANEFVMAKVDYAMAHDGTSVLAVRSFKNMGLEN--VWDPKRIV 59
Query: 130 IIPDHYIFTSDER-ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I DH + E A+ + DI R++ Q I F+D+ + G+CH L +
Sbjct: 60 IPFDHLTPANTETTADLHHDI-REWIGGQGIPNFFDVGE-----------GICHQVLPEN 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSH+CT GAFG F TG+G TD + +G++ +VP T++ G++
Sbjct: 108 GFAMPGKLVVGADSHSCTYGAFGAFGTGVGATDMSEIFASGELWFRVPETIKVTASGKLK 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+LAKD+ L++IG + +GATYK+ EF G T+ LS+ RMTL NM +E G K G+VP
Sbjct: 168 KDVLAKDVTLKVIGTVGASGATYKAAEFYGDTITDLSISGRMTLSNMAIEMGAKAGIVPP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TF +LE + YEPVY+DE A + +EY D + LEP +A PH DN E +
Sbjct: 228 DQKTFDFLEGRAVEGYEPVYADEDAEYCAEYDIDGANLEPQIALPHQVDNVCDVSEIEGK 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V+IG+CT G+ ED AA++ G++V V T ++PA++ + ++
Sbjct: 288 KVDQVFIGTCTNGRLEDLEVAAEIL--KGEQVAVRTIVIPASRSIMLEAVR--------N 337
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
++ +AG T SP CG CLGG
Sbjct: 338 GTAETLLDAGV-TLGSPGCGPCLGG 361
>gi|295099777|emb|CBK88866.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium
cylindroides T2-87]
Length = 420
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 218/386 (56%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI + + + PG + ++D ++ +D+ P + F+K ++ V+D EK
Sbjct: 2 AMTMTQKILAAHAGLESVKPGQLIMADLDEVLGNDITTPVAINEFEKAGFDS--VYDNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D +A RDF + +IK F+D+ +G + H L +
Sbjct: 60 INIVLDHFVPNKDIKAAMQSKACRDFSKKHDIKNFFDVGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++ L G++
Sbjct: 110 QGIVTAGDCIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKVNLIGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL +IG I V GA YKS+EF G V LSM++R+ +CNM +EAG KNG+
Sbjct: 170 QPYVSGKDVILHLIGMIGVDGALYKSLEFSGEGVSSLSMDDRLCICNMAIEAGAKNGIFE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL++++ Y +DE A + E D+S+L P V+ PH P+N A E K
Sbjct: 230 VDDITIDYLKNRSQKEYTIYKADEDAEYEKEITIDLSRLVPTVSYPHLPENTHPASENK- 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+K+D+V IGSCT G+ ED AA ++ V ++PAT +++ +
Sbjct: 289 IKVDQVVIGSCTNGRMEDMKAAYQILKGRQIASDVRVIIIPATMQIYKECIQ-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
K ++ F +AGC ++P+CG CLGG
Sbjct: 341 KGYTEAFIDAGC-VVSTPTCGPCLGG 365
>gi|225851247|ref|YP_002731481.1| 3-isopropylmalate dehydratase large subunit [Persephonella marina
EX-H1]
gi|225645350|gb|ACO03536.1| 3-isopropylmalate dehydratase, large subunit [Persephonella marina
EX-H1]
Length = 428
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 221/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLTEKI + + + + PG+ V V VD+ + +D+ P + +K +G + +V D EK
Sbjct: 2 GMTLTEKILAEHAGRDFVEPGELVTVKVDLAIANDITAPLAIKQLEK-YGID-RVHDPEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D + + + I RDF + IK +++ +D GV H L +
Sbjct: 60 IALVMDHFFPPKDILSAQQIKISRDFAKKMGIKNYFEGQD----------SGVMHTILPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT GA G F+TG+G+TD ++ TG+ LKVP T++F G+
Sbjct: 110 KGFIVPGDLVMGADSHTCTYGALGAFSTGVGSTDIAYIFATGETWLKVPETMKFTFYGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD +L +IGEI V GA Y++ME+ G ++ L +E R+T+ NM +EAGGKN ++
Sbjct: 170 QRWVGGKDFVLTVIGEIGVDGALYRAMEYHGEAIQALDVENRLTIANMAIEAGGKNAIME 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD ++L+DKT P + +D A + EY FD SK+EP+VA P+ P N E
Sbjct: 230 ADEKVLEWLKDKTDRPLRMLKADPDAKYCCEYEFDASKIEPVVAAPNLPSNVKPVTEVAG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
I++V+IGSCT G+ D AA + G+KV V ++PA+ +++
Sbjct: 290 KPINQVFIGSCTNGRMSDLRIAAHIL--KGRKVHPDVRCIVIPASDRIYKQALH------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +I +AGC S +CG CLGG
Sbjct: 342 --EGILEILADAGCLISTS-TCGPCLGG 366
>gi|15643320|ref|NP_228364.1| 3-isopropylmalate dehydratase large subunit [Thermotoga maritima
MSB8]
gi|170288184|ref|YP_001738422.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. RQ2]
gi|418045273|ref|ZP_12683369.1| 3-isopropylmalate dehydratase large subunit [Thermotoga maritima
MSB8]
gi|22001732|sp|Q9WZ24.1|LEUC2_THEMA RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|4981069|gb|AAD35639.1|AE001730_7 3-isopropylmalate dehydratase, large subunit [Thermotoga maritima
MSB8]
gi|170175687|gb|ACB08739.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga sp. RQ2]
gi|351678355|gb|EHA61502.1| 3-isopropylmalate dehydratase large subunit [Thermotoga maritima
MSB8]
Length = 417
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 223/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + + ++ PG+ + + DI + +D+ P + FK+ G+ K DR +
Sbjct: 1 MTLAEKILSQKAGR-KVEPGEFLLLEPDIALANDITAPLAIKKFKEYGGKKVKYPDR--V 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +E
Sbjct: 58 VLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD-AGFVLGTGKVLLKVPPTLRFVLDGEM 247
G + G++++G DSHTCT GA G FATG+G+TD AGF L GKV +VP +++ L G+
Sbjct: 108 GIVKSGDLVVGADSHTCTYGALGAFATGVGSTDIAGFYL-IGKVWFRVPESIKVTLRGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKDL+L++I + V GA YK++EF G V+ +SM+ R T+ NM +EAGGK G+ P
Sbjct: 167 KDLVTAKDLVLKLISILGVDGANYKAIEFSGPGVKEISMDGRFTISNMAIEAGGKTGLFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y E + + E +Y DE A ++ E D+S+LEP VA P P N E +
Sbjct: 227 VDEITIAY-ERERGIEVEEMYPDEDAKYVREVEMDLSELEPQVAYPFLPSNAKDVSEAEK 285
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G+ ED AA++ V ++P +QKV+
Sbjct: 286 ERIKIDQAVIGSCTNGRIEDLRLAAQILKGRTVSPDVRCIIIPGSQKVYKQALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC ++P+CG CLGG
Sbjct: 340 --EGLIDIFIDAGCAV-STPTCGPCLGG 364
>gi|424783576|ref|ZP_18210408.1| 3-isopropylmalate dehydratase large subunit [Campylobacter showae
CSUNSWCD]
gi|421958609|gb|EKU10228.1| 3-isopropylmalate dehydratase large subunit [Campylobacter showae
CSUNSWCD]
Length = 424
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 228/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ G+ + ++D+++ +D+ P S F++ K+ + +
Sbjct: 7 TITEKIFSEHVGR-EVFAGEIIESDIDMVIGNDITTPISIKQFERSGA--TKLANPDGFS 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHYI D + I RDF + ++K ++D KD+G + H L ++G
Sbjct: 64 VVMDHYIPAKDILSANQAKISRDFAYKHDLKNYFDEKDMG----------IEHALLPEKG 113
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD + + TGK KVPPT++ + G++
Sbjct: 114 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAYAMITGKNWFKVPPTIKVIFRGKLDR 173
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II I V GA YK++EF G T+E L M+ R ++CNM +EAGGK+G++ D
Sbjct: 174 HVYGKDLILEIIRRIGVDGALYKALEFTGETIENLDMDGRFSMCNMAIEAGGKSGIIAVD 233
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
TT ++L+ K +L EP YSDE A++ D+SKL+P++A P P N RE
Sbjct: 234 ETTKEFLKGK-NLRAEPKLHYSDEGANYEQILEIDVSKLDPVIAYPFLPSNGKSVREAVR 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
++ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 293 DNIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVARKTRLIITPATQKIALQAQK---- 346
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CGACLGG
Sbjct: 347 ----EGLMDIFAEAGA-VVSNPTCGACLGG 371
>gi|219850865|ref|YP_002465297.1| homoaconitate hydratase family protein [Methanosphaerula palustris
E1-9c]
gi|219545124|gb|ACL15574.1| homoaconitate hydratase family protein [Methanosphaerula palustris
E1-9c]
Length = 419
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 218/390 (55%), Gaps = 28/390 (7%)
Query: 67 NAM--TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
NAM T+ EKIFS +P + GD V +D M HD+ GP + F + G +V+D
Sbjct: 2 NAMGATIAEKIFSTRCGRP-VHAGDVVMAPIDAAMIHDITGPLAIQTFYQMGG--TRVFD 58
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+K++++ DH I A N ++R F EQ I + YD+ ++GVCH
Sbjct: 59 PKKVIMLFDHQIPADSIAAAGNHQLMRKFAAEQGI-HNYDL-----------HEGVCHQV 106
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ ++G PGE+++G+DSHTC GA G FATGIG+TD GFVL G + +VP T+R +D
Sbjct: 107 VLEKGRAGPGEIVVGSDSHTCMYGAAGAFATGIGSTDMGFVLKFGALYFRVPETIRMTID 166
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G + KDLIL IIG+I GATYK++EF G+T+ + M RMTL NM +E GGK G
Sbjct: 167 GAFQRRVGPKDLILSIIGDIGADGATYKAVEFAGSTIRGMEMPGRMTLSNMAIEMGGKAG 226
Query: 305 VVPADGTTFKYLEDKTSL-PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
+VP D T+ YL+ + + P+E + SDE A+F + R+D++ L P VA PH+ D+
Sbjct: 227 IVPPDQVTWDYLKSRRQVTPFE-LDSDEDATFADQRRYDVTNLVPKVAVPHNVDHVVDVT 285
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
E +D+V+IGSCT G+ ED AA V + ++PA++ ++
Sbjct: 286 EVAGTHLDQVFIGSCTNGRFEDLAEAAAVLGDRNFSEDLRVLVIPASRDEYLKTLR---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 342 ----AGLIERFVEAGAMVEA-PCCGPCMGG 366
>gi|15896421|ref|NP_349770.1| 3-isopropylmalate dehydratase large subunit [Clostridium
acetobutylicum ATCC 824]
gi|337738379|ref|YP_004637826.1| 3-isopropylmalate dehydratase large subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459889|ref|YP_005672309.1| 3-isopropylmalate dehydratase large subunit [Clostridium
acetobutylicum EA 2018]
gi|22001778|sp|Q97EE0.1|LEUC_CLOAB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|15026241|gb|AAK81110.1|AE007812_6 3-Isopropylmalate dehydratase, large subunit [Clostridium
acetobutylicum ATCC 824]
gi|325510578|gb|ADZ22214.1| 3-isopropylmalate dehydratase large subunit [Clostridium
acetobutylicum EA 2018]
gi|336292357|gb|AEI33491.1| 3-isopropylmalate dehydratase large subunit [Clostridium
acetobutylicum DSM 1731]
Length = 422
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 220/389 (56%), Gaps = 21/389 (5%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
+K MT+T+KI + + + G + N+D+++ +DV P + FK G N KV+D
Sbjct: 1 MKKPMTMTQKILANHAGLDYVEAGQLITANLDLVLGNDVTTPVAVKAFKT-MGTN-KVFD 58
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
++K+ I+PDH+ D ++ + ++R F + I+ +++I ++G + H
Sbjct: 59 KKKVAIVPDHFTPNKDIKSAEHCKMIRQFAKSKEIENYFEIGEMG----------IEHAL 108
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ ++G PG+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL
Sbjct: 109 IPEKGLAVPGDVIIGADSHTCTYGALGVFSTGVGSTDMAVGMATGKAWFKVPEAIKFVLK 168
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G+ ++ KD+IL IIG I V GA YKSME+ G +E LSM++R T+ NM +EAG KNG
Sbjct: 169 GKPAKWVSGKDIILHIIGMIGVDGALYKSMEYTGDGLEYLSMDDRFTIANMAIEAGAKNG 228
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
+ P D T +Y++ ++ + +DE A + D+S L+P VA PH P+N +
Sbjct: 229 IFPVDEKTIEYMKGRSDRELKKFDADEDAEYSRVIEIDLSTLKPTVAFPHLPENTKTIDQ 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+V +D+V IGSCT G+ ED AA + K + + P TQ ++++
Sbjct: 289 VGEVNVDQVVIGSCTNGRMEDLRIAASILKGKKIKKGIRLIVFPGTQNIYLEAME----- 343
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 344 ---EGLVRTFIEAG-GIVSTPTCGPCLGG 368
>gi|357420391|ref|YP_004933383.1| homoaconitate hydratase [Thermovirga lienii DSM 17291]
gi|355397857|gb|AER67286.1| homoaconitate hydratase family protein [Thermovirga lienii DSM
17291]
Length = 418
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 212/384 (55%), Gaps = 25/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+ +A+ + + G V V M+HD P S FKK G + KVW+ + +V
Sbjct: 4 TFAEKVLGKAAGQ-DVKAGQVVTVEPHFCMSHDNAAPIS-KTFKK-IGVD-KVWNPDHLV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DH + ++ N I+R+F EQ IK+FYD+ G GVCH + QEG
Sbjct: 60 IILDHAVPAPTDKHAENHKIIREFVKEQGIKHFYDVNSKG---------GVCHQIMCQEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G+DSHTCT GA+G F+TGIG ++ TGK+ +VP +++ + G
Sbjct: 111 FALPGLVMVGSDSHTCTYGAYGAFSTGIGRSEMAATWATGKIWFRVPESMKITVKGSFKK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+IIG+I GA Y S+EF G + ++S+ ERMTLCNM +E G KN V P D
Sbjct: 171 GVSAKDLILKIIGDIKADGADYMSVEFHGPAISQMSLAERMTLCNMGIEMGAKNAVCPPD 230
Query: 310 GTTFKYLEDKTSL-PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ ++D +E +++DE A + E +D+ LEP VAKPH+ DN A E
Sbjct: 231 EKVLEAIKDNAKTDKWEAIWADEDAVYAKELEYDLQDLEPGVAKPHTVDNYAPVSEVAGT 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
I + ++GSCT + ED AA + GK+V V T ++PA+ KV+ +
Sbjct: 291 PIHQAFLGSCTNARIEDLREAASIL--KGKEVAVRTIVIPASWKVYRQAME--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
IF +AGC +P CG C+G
Sbjct: 341 GLLDIFLDAGC-IINNPGCGPCMG 363
>gi|281411772|ref|YP_003345851.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga
naphthophila RKU-10]
gi|281372875|gb|ADA66437.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga
naphthophila RKU-10]
Length = 417
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 223/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + + ++ PG+ + + DI + +D+ P + FK+ G+ K DR +
Sbjct: 1 MTLAEKILSQKAGR-KVEPGEFLLLEPDIALANDITAPLAIKKFKEYGGKKVKYPDR--V 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +E
Sbjct: 58 VLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD-AGFVLGTGKVLLKVPPTLRFVLDGEM 247
G + G++++G DSHTCT GA G FATG+G+TD AGF L GKV +VP +++ L G+
Sbjct: 108 GIVKSGDLVVGADSHTCTYGALGAFATGVGSTDIAGFYL-IGKVWFRVPESIKVTLRGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKDL+L++I + V GA YK++EF G V+ +SM+ R T+ NM +EAGGK G+ P
Sbjct: 167 KDLVTAKDLVLKLISILGVDGANYKAIEFSGPGVKEISMDGRFTISNMAIEAGGKTGLFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y E + + E +Y DE A ++ E D+S+LEP VA P P N E +
Sbjct: 227 VDEITIAY-ERERGIEVEEMYPDEDAKYVREVEMDLSELEPQVAYPFLPSNAKDVSEAEK 285
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G+ ED AA++ V ++P +QKV+
Sbjct: 286 ERIKIDQAVIGSCTNGRIEDLRLAAQILKGRTVSPDVRCIIIPGSQKVYKQALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +F +AGC ++P+CG CLGG
Sbjct: 340 --EGLIDVFIDAGCAV-STPTCGPCLGG 364
>gi|152991410|ref|YP_001357132.1| 3-isopropylmalate dehydratase large subunit [Nitratiruptor sp.
SB155-2]
gi|166989643|sp|A6Q5L6.1|LEUC_NITSB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|151423271|dbj|BAF70775.1| 3-isopropylmalate dehydratase, large subunit [Nitratiruptor sp.
SB155-2]
Length = 421
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 226/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ G+ V +D+++ +D+ P S F+ + K+ +
Sbjct: 4 TITEKIFSEHVGR-EVKAGEIVECELDMIIGNDITTPISIKAFRDSGAK--KLAKPDNFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I R+F E N+K+F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQAKISREFAYEHNLKHFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD + + TGK KVPP+++ + G++ +
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAYGMITGKNWFKVPPSIKVIYTGKLGE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I I V GA YK++EF G T+E L M+ R +LCNM +EAG KNG++ D
Sbjct: 171 HVYGKDLILELIRRIGVDGALYKALEFTGDTIENLDMDGRFSLCNMAIEAGAKNGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T +L DK L EP YSDE A + D++ LEP++A PH P N R ++ K
Sbjct: 231 EVTKAFLADK-PLAREPKIHYSDEDAEYEQVIEIDVNNLEPVIAFPHLPSNGRPISEAAK 289
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+K+D+V+IGSCT G+ D AA++ G+KV T ++ PATQK+ +
Sbjct: 290 MDLKVDQVFIGSCTNGRLSDIAIAAEIL--KGRKVARHTRMIVTPATQKILKEAEK---- 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ I +AG ++P+CGACLGG
Sbjct: 344 ----RGYIDILIDAGA-VVSNPTCGACLGG 368
>gi|337288824|ref|YP_004628296.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobacterium
sp. OPB45]
gi|334902562|gb|AEH23368.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobacterium
geofontis OPF15]
Length = 429
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 226/405 (55%), Gaps = 26/405 (6%)
Query: 66 KNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR 125
K MTL EKI + ++ + PG+ V V VD+ + +D+ P + IF E KV+D
Sbjct: 3 KRPMTLAEKILATKLKRDYVEPGELVEVPVDLTLANDITAPLAIKIF--ESTNIGKVFDP 60
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
EKIV++ DH+ D ++ V + R+F + I ++Y+ GN G+ H L
Sbjct: 61 EKIVLVMDHFTPNKDIKSAEQVRLCREFARKYKISHYYE---GGNC-------GIEHALL 110
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+ G PG++++G DSHTCT GA G FATG+G+TD TGK KVP T++FV G
Sbjct: 111 PELGLVGPGDIVIGADSHTCTYGALGAFATGVGSTDLAAAWITGKTWFKVPETIKFVYYG 170
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++ KDLIL IG+I V GA YK+MEF G T+++LSM ER T+ NM +EAGGK G+
Sbjct: 171 RPKPWITGKDLILYTIGDIGVDGALYKAMEFTGETIKKLSMAERFTMANMAIEAGGKVGL 230
Query: 306 VPADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
+ D T Y++++ EPV +D+ A ++ +D+SK++ LVA PH P N +
Sbjct: 231 IEPDKITLAYIKNR--FKREPVILKADKNAKYIEIREYDVSKIDLLVALPHLPSNVKPVK 288
Query: 364 ECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
+ D + ID+V IGSCT G+ ED AAK+ V ++PAT K++ +
Sbjct: 289 DLPDKIYIDQVVIGSCTNGRIEDLAIAAKILKNRKVNPNVRCIIIPATPKIYYEALK--- 345
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ ++F EAG + P+CG CLGG A+ + +A+
Sbjct: 346 -----RGYIRVFIEAGAIV-SPPTCGPCLGGHMGILAKGEKAVAT 384
>gi|348026762|ref|YP_004766567.1| 3-isopropylmalate dehydratase large subunit [Megasphaera elsdenii
DSM 20460]
gi|341822816|emb|CCC73740.1| 3-isopropylmalate dehydratase large subunit [Megasphaera elsdenii
DSM 20460]
Length = 419
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 211/386 (54%), Gaps = 22/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ + + PGD + N+D+++ +D+ P + F K V+D+ K
Sbjct: 2 GMTMTQKILAKHAGVDSVKPGDLITCNLDMVLANDITAPPAIAQFNKI---GKPVFDKTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH+ D ++ I+RDF + I +++++ +G + H+ L +
Sbjct: 59 ISLVPDHFTPNKDIKSAGLAKIVRDFAKKHGITHYFEVGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA G F+TG+G+TD G + TGK KVP + L G
Sbjct: 109 QGIVAPGMLTIGADSHTCTYGALGGFSTGVGSTDLGVAMATGKAWFKVPDAINVHLTGTK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PD + KD++L +IG I V GA Y+S+EF G V L M +R T+ NM +EAG KNG+ P
Sbjct: 169 PDDITGKDVMLTLIGMIGVDGALYQSLEFTGEGVAALDMTDRFTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y + + Y+ V +DE A + ++S+L+P+VA PH P+N + D
Sbjct: 229 VDEQTMAYEKGRVPDGYDIVTADEDAHYSRTVEINLSELKPVVAFPHLPENTKVIGTFGD 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+V IGSCT G+ ED AA + V ++P +Q V+M+
Sbjct: 289 IKIDQVVIGSCTNGRLEDLKIAADILKGHKVHPDVRCIVIPGSQHVYMEAMK-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AGC ++P+CG CLGG
Sbjct: 341 AGYIETFITAGCAV-STPTCGPCLGG 365
>gi|315924777|ref|ZP_07920994.1| 3-isopropylmalate dehydratase large subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621676|gb|EFV01640.1| 3-isopropylmalate dehydratase large subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 420
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 220/391 (56%), Gaps = 32/391 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + GD + N+D+++ +D+ P + +FK + +V+DREK+
Sbjct: 3 MTMTQKILAAHAGADSVKAGDLIMANLDMVLGNDITSPVAINVFKNL--DTDQVFDREKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D +A +R+F Q I ++++ ++G V H L ++
Sbjct: 61 ALVPDHFAPNKDIKAAEQCKKVREFAGGQKISNYFEVGEMG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TGK KVP L+F L G
Sbjct: 111 GLVVGGDLVIGADSHTCTYGALGAFSTGVGSTDMAVGMATGKAWFKVPSALKFNLTGSFK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KDLIL IIG I V GA Y+SMEF G V L+M++R T+ NM +EAGGKNG+ P
Sbjct: 171 PNVSGKDLILHIIGMIGVDGALYQSMEFAGPGVASLTMDDRFTIANMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y+++ +S PY +D A + + + ++S+L+P VA PH P+N E ++
Sbjct: 231 DEQTVAYIKEHSSKPYTVYEADADAEYDAVFDINLSELKPTVAFPHLPENTKTVDEIEEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVW---MDVYTLPV 422
+ I +V IGSCT G+ DF A K+ G+KV V ++PAT K+W MD
Sbjct: 291 LTIHQVVIGSCTNGRFSDFEKADKIL--KGRKVADGVRVLIIPATPKIWEQCMDAGFF-- 346
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AGC ++P+CG CLGG
Sbjct: 347 ---------KDFVAAGCAI-STPTCGPCLGG 367
>gi|238924355|ref|YP_002937871.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium rectale
ATCC 33656]
gi|238876030|gb|ACR75737.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium rectale
ATCC 33656]
Length = 420
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 222/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + +S G + ++D+++ +D+ P + K E V++++K
Sbjct: 2 GMTMTQKILAAHAGLDSVSAGQLIEADLDLVLGNDITSPVAIHEINKMKVEG--VFNKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ + +R+F + I ++D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAEHCKCVREFACKNEITNYFDVGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F + G+
Sbjct: 110 QGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKFNIVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AEWISGKDVILHIIGMIGVDGALYKSMEFVGDGLKYLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + P+ +D A + EY D+S L+ V+ PH PDN E D
Sbjct: 230 VDDLTREYMKEHSKRPFTEYEADSDAEYDEEYTIDLSTLKSTVSFPHLPDNTRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ +D AAK+ GKKV + ++PATQK+++
Sbjct: 290 VKIDQVVIGSCTNGRMDDLRIAAKIL--EGKKVADGIRVIVIPATQKIYLQAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLLKTFIEAGA-IVSTPTCGPCLGG 366
>gi|291525129|emb|CBK90716.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium rectale
DSM 17629]
Length = 420
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 222/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + +S G + ++D+++ +D+ P + K E V++++K
Sbjct: 2 GMTMTQKILAAHAGLDSVSAGQLIEADLDLVLGNDITSPVAIHEINKMKVEG--VFNKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ + +R+F + I ++D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAEHCKCVREFACKNEITNYFDVGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F + G+
Sbjct: 110 QGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKFNIVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AEWISGKDVILHIIGMIGVDGALYKSMEFVGEGLKYLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + P+ +D A + EY D+S L+ V+ PH PDN E D
Sbjct: 230 VDDLTREYMKEHSKRPFTEYEADSDAEYDEEYTIDLSTLKSTVSFPHLPDNTRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ +D AAK+ GKKV + ++PATQK+++
Sbjct: 290 VKIDQVVIGSCTNGRMDDLRIAAKIL--EGKKVADGIRVIVIPATQKIYLQAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLLKTFIEAGA-IVSTPTCGPCLGG 366
>gi|374627194|ref|ZP_09699602.1| 3-isopropylmalate dehydratase, large subunit [Coprobacillus sp.
8_2_54BFAA]
gi|373913739|gb|EHQ45576.1| 3-isopropylmalate dehydratase, large subunit [Coprobacillus sp.
8_2_54BFAA]
Length = 424
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 218/398 (54%), Gaps = 29/398 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI ++ + + G + +D++M +D+ GP + IF + KV+DR+K
Sbjct: 2 AMTMTQKILAKHAGLDAVVAGQLIEAKLDVVMANDITGPMALPIFHQM---ADKVFDRDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++++PDH+ D ++ N + DF +Q + + + G V H L +
Sbjct: 59 VILVPDHFTPNKDIKSAENSKAILDFSNDQCLTHHMEQGKCG----------VEHAILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 109 KGIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL II I V GA YKSMEFVG ++ L+M++R T+CNM +EAG KNG+ P
Sbjct: 169 SQFVSGKDIILDIITRIGVDGARYKSMEFVGEGIQHLTMDDRFTICNMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK- 366
D T Y+E + Y +DE A + D+ K+ P VA PH P N E +
Sbjct: 229 VDEQTIAYMEKHSVKEYAVYEADEDAEYDEVIEIDLGKVRPTVAFPHLPGNGHTIDEIEA 288
Query: 367 --DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
+ ID+V IGSCT G+ D AA + GK+V V +VPATQK+++
Sbjct: 289 MDKIMIDQVVIGSCTNGRLSDLRKAAAIL--KGKQVAKNVRVMVVPATQKIFVQCIH--- 343
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 344 -----EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 375
>gi|319791511|ref|YP_004153151.1| homoaconitate hydratase family protein [Variovorax paradoxus EPS]
gi|315593974|gb|ADU35040.1| homoaconitate hydratase family protein [Variovorax paradoxus EPS]
Length = 428
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 216/390 (55%), Gaps = 32/390 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ +RAS + ++S G+ V VD+ M HD GP +E G A++WDR +
Sbjct: 11 AQTLAQKLIARASGRERVSVGEIVTCGVDMAMFHDSSGPRRLKPMLEELG--AQIWDRSR 68
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ D+ + R V I RD+ +Q + + YD +G+CH+ + Q
Sbjct: 69 VVLVMDHYVPERDDDSRRIVRIARDWARDQQLPHVYD------------SQGICHVVVPQ 116
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG + +G DSH+ T GAFG + GIG+T+ V+ TG++ L+VP T+R DG +
Sbjct: 117 HGHIRPGMLCVGGDSHSPTGGAFGAYMFGIGSTEMLGVMVTGEIWLRVPETIRMWWDGAL 176
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E G + G++
Sbjct: 177 PAGVTAKDMMLHMIGRFGMNGGRYQAVEFAGPAVAALSMQERMTLSNMSAELGAQAGLIA 236
Query: 308 ADGTTFKYLEDKTSLPYE--PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TT ++L + P + P ++DE A L+++RFD S LEP VA PHSP N
Sbjct: 237 PDATTAEFLAGAGAPPVDMAPWFTDEGAE-LTDHRFDASTLEPYVAAPHSPANAHGVSRY 295
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT---QKVWMDVYTLPV 422
+D YIG+CTG K +D AAA+V + + PA+ Q+ + L
Sbjct: 296 VGTPVDVAYIGACTGAKLDDLRAAAQVLRGHKVASGIRLIVAPASIRDQEAAREEGVL-- 353
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
Q+ +AG + + +CGAC G
Sbjct: 354 ---------QVLMDAGAELFPT-ACGACSG 373
>gi|313898895|ref|ZP_07832426.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp. HGF2]
gi|422327737|ref|ZP_16408764.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 6_1_45]
gi|312956327|gb|EFR37964.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp. HGF2]
gi|371662285|gb|EHO27491.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 6_1_45]
Length = 421
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 221/386 (57%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + VN+D+++ +D+ P + F+K +G ++V+D KI
Sbjct: 3 MTMTQKILAAHAGLDHVEAGQLIEVNLDMVLGNDITSPVAIKEFEK-YG-FSQVFDPGKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NI++FYD+ ++G + H L ++
Sbjct: 61 SMVMDHFAPNKDIKAAQQCKACRTFAYAKNIEHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ LSM++R+ + NM +EAG KNG+
Sbjct: 171 PHVSGKDVILHIIGMIGVDGALYKSMEFSGIGLQSLSMDDRLCMANMAIEAGAKNGIFAF 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++D+ S PY +D A + + Y D+S++ VA PH P+N E K+
Sbjct: 231 DEITEAYVKDRVSRPYVTYEADADAEYCNVYHLDLSQITHTVAFPHLPENTRTMDEIKEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+V IGSCT G+ D AA++ V ++PATQ+++ L
Sbjct: 291 VRIDQVVIGSCTNGRLSDMAEAAQILKGQHVAKGVRAIIIPATQEIYKQCIQLGY----- 345
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
++IF +AGC ++P+CG CLGG
Sbjct: 346 ---TEIFIDAGC-VVSTPTCGPCLGG 367
>gi|254167759|ref|ZP_04874609.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197623287|gb|EDY35852.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 419
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 218/393 (55%), Gaps = 28/393 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + K + GD V VD+ M D GP S + + + G +V+D++ V
Sbjct: 4 TMAEKIIGEHAGK-DVKAGDIVVAKVDVAMVQDGTGPLSVQVLE-DMGL-VQVFDKKNTV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + ILR+F E+ Y D+ + GVCH L E
Sbjct: 61 LFLDHATPSPRKELSNAHKILREFS-EKTGAYLSDVGE-----------GVCHQRLV-ES 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT+GA G FATG+G+TD GKV L+VP T RF ++G+ P
Sbjct: 108 WASPGQLIVGADSHTCTSGALGAFATGMGSTDVAIAFALGKVWLRVPETHRFYIEGKFPK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL IIG I GATYKSMEF G T++++SME R T+ NM +EAGGK G++ D
Sbjct: 168 GVYSKDLILHIIGTIGADGATYKSMEFYGPTIDKMSMESRFTITNMAIEAGGKTGMIAPD 227
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
TT KYLE+ Y + SD+ A F EY F++ +LEP V+ PH+ DN E K
Sbjct: 228 ATTKKYLEEMGRGEKYREIKSDDDAWFEKEYEFNVDELEPTVSFPHTVDNTRTISEAKKM 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+++ID+VYIG+CT G+ ED AAK+ + K ++PA+++V++
Sbjct: 288 NIRIDQVYIGTCTNGRIEDLRVAAKILDGNKVNKKTRLIVIPASRRVYIQALK------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ + F EAG SP CG C+G K A
Sbjct: 341 -EGLLEKFVEAGAAIE-SPGCGPCVGIHKGVLA 371
>gi|346316985|ref|ZP_08858482.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345902022|gb|EGX71814.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 421
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 221/386 (57%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + VN+D+++ +D+ P + F+K +G ++V+D KI
Sbjct: 3 MTMTQKILAAHAGLDHVEAGQLIEVNLDMVLGNDITSPVAIKEFEK-YG-FSQVFDPGKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NI++FYD+ ++G + H L ++
Sbjct: 61 SMVMDHFAPNKDIKAAQQCKACRTFAYAKNIEHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ LSM++R+ + NM +EAG KNG+
Sbjct: 171 PHVSGKDVILHIIGMIGVDGALYKSMEFSGIGLQSLSMDDRLCMANMAIEAGAKNGIFAF 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++D+ S PY +D A + + Y D+S++ VA PH P+N E K+
Sbjct: 231 DEITEAYVKDRVSRPYVTYEADADADYCNVYHLDLSQITHTVAFPHLPENTRTMDEIKEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+V IGSCT G+ D AA++ V ++PATQ+++ L
Sbjct: 291 VRIDQVVIGSCTNGRLSDMAEAAQILKGQHVAKGVRAIIIPATQEIYKQCIQLGY----- 345
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
++IF +AGC ++P+CG CLGG
Sbjct: 346 ---TEIFIDAGC-VVSTPTCGPCLGG 367
>gi|210616208|ref|ZP_03290988.1| hypothetical protein CLONEX_03207 [Clostridium nexile DSM 1787]
gi|210149874|gb|EEA80883.1| hypothetical protein CLONEX_03207 [Clostridium nexile DSM 1787]
Length = 438
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 223/407 (54%), Gaps = 28/407 (6%)
Query: 50 MAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSF 109
M Q+E+ ++ MT+T+KI + + ++ G + +D++M +D+ GP +
Sbjct: 1 MIEYQTEQEKE---GIQMGMTMTQKILAAHAGLESVTAGQLIEAKLDVVMANDITGPMAV 57
Query: 110 GIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLG 169
+F + KV+D++K+V++PDH+ D ++ N +R+F Q + ++++I +G
Sbjct: 58 PVF---YQMADKVFDKDKVVLVPDHFTPNKDIKSAENSKSIREFSKCQCLTHYFEIGQMG 114
Query: 170 NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTG 229
+ H L ++G GE ++G DSHTCT GA G F+TG+G TD + TG
Sbjct: 115 ----------IEHAILPEKGIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATG 164
Query: 230 KVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEER 289
++ KVP ++FVL G+ Y+ KD+IL IIG+I V GA YKSMEFVG + LSM++R
Sbjct: 165 ELWFKVPSAIKFVLTGKPGKYVSGKDIILHIIGKIGVDGALYKSMEFVGDGIANLSMDDR 224
Query: 290 MTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPL 349
T+ NM +EAG KNG+ D Y+++ + Y+ +DE A + D+SK+ P
Sbjct: 225 FTMANMAIEAGAKNGIFIVDEKAEAYMKEHSEKEYKVYTADEDAEYDEVVEIDLSKVRPT 284
Query: 350 VAKPHSPDNRALARECKD---VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL 406
VA PH P N E ++ +KID+V IGSCT G+ ED AA V V +
Sbjct: 285 VAFPHLPGNAKTIDEVEEMEPIKIDQVVIGSCTNGRMEDMRRAAAVLKGHKVHPDVRVMV 344
Query: 407 VPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+PATQK+++ + F E+GC +PSCG C+GG
Sbjct: 345 IPATQKIYLQCIE--------EGLVTTFIESGC-AFNTPSCGPCMGG 382
>gi|91200641|emb|CAJ73691.1| similar to 3-isopropylmalate dehydratase, large subunit [Candidatus
Kuenenia stuttgartiensis]
Length = 437
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 215/385 (55%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + ++ PG V+ NVD+ + +D+ P + F+K KV+D EKI
Sbjct: 10 MTITEKIIAAHCGEREVRPGQFVYANVDVCLGNDITAPIAIEEFEK--AGIKKVFDPEKI 67
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ + LR F + ++K++++I +G + H L ++
Sbjct: 68 VLVPDHFTPNKDIQSAQQSKSLRVFAEKHHLKHYFEIGRMG----------IEHALLPEQ 117
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE+++G DSHTCT GA G F+TGIG+TD TGKV LKVP +++FV G+
Sbjct: 118 GIVAPGELVIGADSHTCTYGALGAFSTGIGSTDLAACFATGKVWLKVPESIKFVFHGKAR 177
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD IL IG+I V GA YK+MEF GT + L M++R T+CNM +EAG K+G++
Sbjct: 178 NWTSGKDFILYTIGKIGVDGALYKAMEFTGTAISDLPMDDRFTICNMAIEAGAKSGIIAP 237
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+ + Y +SD + + Y F+ ++ P VA P P+N + +
Sbjct: 238 DKITENYVAGRVKREYVAYHSDPDSHYSKVYEFNAEEIVPQVALPSLPENTKSVYDVCGI 297
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V IGSCT G+ D AAK+ + ++PATQ+++ +
Sbjct: 298 KIDQVVIGSCTNGRISDLRIAAKILKGKKAHPSLRLIIIPATQEIYKQALK--------E 349
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+IF +A ++P+CG CLGG
Sbjct: 350 GLIEIFIDAEA-VVSTPTCGPCLGG 373
>gi|148269510|ref|YP_001243970.1| 3-isopropylmalate dehydratase large subunit [Thermotoga petrophila
RKU-1]
gi|147735054|gb|ABQ46394.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga petrophila
RKU-1]
Length = 417
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 223/388 (57%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + + ++ PG+ + + D+ + +D+ P + FK+ G+ K DR +
Sbjct: 1 MTLAEKILSQKAGR-KVEPGEFLLLEPDVALANDITAPLAIKKFKEYGGKKVKYPDR--V 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +E
Sbjct: 58 VLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD-AGFVLGTGKVLLKVPPTLRFVLDGEM 247
G + G++++G DSHTCT GA G FATG+G+TD AGF L GKV +VP +++ L G+
Sbjct: 108 GIVKSGDLVVGADSHTCTYGALGAFATGVGSTDIAGFYL-IGKVWFRVPESIKVTLRGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKDL+L++I + V GA YK++EF G V+ +SM+ R T+ NM +EAGGK G+ P
Sbjct: 167 GDLVTAKDLVLKLISILGVDGANYKAIEFSGPGVKEISMDGRFTVSNMAIEAGGKTGLFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y E + + E +Y DE A ++ E D+S+LEP VA P P N E +
Sbjct: 227 VDEITIAY-ERERGIEVEEMYPDEDAKYVREVEMDLSELEPQVAYPFLPSNAKDVSEAEK 285
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G+ ED AA++ V ++P +QKV+
Sbjct: 286 ERIKIDQAVIGSCTNGRIEDLRLAAQILKGRTVSPDVRCIIIPGSQKVYKQALK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC ++P+CG CLGG
Sbjct: 340 --EGLIDIFIDAGCAV-STPTCGPCLGG 364
>gi|302336316|ref|YP_003801523.1| 3-isopropylmalate dehydratase large subunit [Olsenella uli DSM
7084]
gi|301320156|gb|ADK68643.1| 3-isopropylmalate dehydratase, large subunit [Olsenella uli DSM
7084]
Length = 431
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 215/395 (54%), Gaps = 32/395 (8%)
Query: 69 MTLTEKIFSRASEK----------PQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE 118
MT+ EKI + + ++ PG V ++D ++ +D+ P + + E G
Sbjct: 5 MTMAEKILAGHAVTGHGAIGDGGLDEVVPGQLVECDLDGVLANDITAPIAIKTVR-EIG- 62
Query: 119 NAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYK 178
A VWD++K+ ++PDHY D ++ + RDF E I ++++ +G
Sbjct: 63 -AGVWDKDKVFLVPDHYAPNKDIKSAEQTKVTRDFAHEMGISHYFEQGCMG--------- 112
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
+ H L + G PG++++G DSHTCT G G F+TG+G+TDAG + TG+ KVP T
Sbjct: 113 -IEHALLPERGIVVPGDLIIGADSHTCTYGGIGAFSTGVGSTDAGVGMATGRAWFKVPET 171
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
+RF +DG++P+ AKD+IL +IG++ V GA Y +MEF G+T+E LS+E R+T+ NM +E
Sbjct: 172 IRFEIDGKLPEGASAKDVILYVIGQVGVDGALYCAMEFAGSTIEGLSVEGRLTIANMAIE 231
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
AGGK G+ D K+LE + P+ +SD A + + D + + P V+ PH P N
Sbjct: 232 AGGKAGLFEVDDVARKWLEGRAERPWTECHSDAGAQYKQVIKIDAADIVPTVSWPHLPSN 291
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
E + + +D+ IGSCT G+ ED AAA V V ++PATQ VW+
Sbjct: 292 THPVAESRHITVDQAVIGSCTNGRIEDMRAAADVLRGRSVADGVRCIVIPATQGVWLQCV 351
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +F +A C ++P+CG CLGG
Sbjct: 352 H--------EGLMDVFIDAHC-VVSTPTCGPCLGG 377
>gi|147841855|emb|CAN73592.1| hypothetical protein VITISV_037512 [Vitis vinifera]
Length = 252
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/154 (81%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 330 DEKASFLSEYRFDISKLEPLVAK---------------PHSPDNRALARECKDVKIDRVY 374
D FLSEYRFD+SKLEPLVAK PHSPDNRALARECKDVKIDRVY
Sbjct: 23 DSVHRFLSEYRFDVSKLEPLVAKVRDFYMALSEIIFIFPHSPDNRALARECKDVKIDRVY 82
Query: 375 IGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIF 434
IGSCTGGKTEDFLAAAKVF SGKKVKVPTFLVPATQKVWMDVY+LPVPG GGKTCSQIF
Sbjct: 83 IGSCTGGKTEDFLAAAKVFHVSGKKVKVPTFLVPATQKVWMDVYSLPVPGCGGKTCSQIF 142
Query: 435 EEAGCDTPASPSCGACLGGPKDTYARMNEPMASL 468
EEAGCDTPASPSCGACLGGP+DTYARMNEP A+
Sbjct: 143 EEAGCDTPASPSCGACLGGPRDTYARMNEPQATF 176
>gi|410657543|ref|YP_006909914.1| 3-isopropylmalate dehydratase large subunit [Dehalobacter sp. DCA]
gi|410660578|ref|YP_006912949.1| 3-isopropylmalate dehydratase large subunit [Dehalobacter sp. CF]
gi|409019898|gb|AFV01929.1| 3-isopropylmalate dehydratase large subunit [Dehalobacter sp. DCA]
gi|409022934|gb|AFV04964.1| 3-isopropylmalate dehydratase large subunit [Dehalobacter sp. CF]
Length = 424
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 226/403 (56%), Gaps = 26/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT++EKI + + ++ PG+ + +DI++++DV P + F+K E KV+D+EK
Sbjct: 2 GMTISEKILAAHAGVDKVVPGEIINAKLDIVLSNDVTAPVAIKEFEKLGIE--KVFDKEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D + +R+F + IK+++D +G + H L +
Sbjct: 60 VALVPDHFTPNKDIASAEQCKTVREFARKHEIKHYWDTGRVG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG++++G DSHTCT GA G FATG+G+TD + TG+ +VP TL+FV G +
Sbjct: 110 QGVVLPGDLIIGADSHTCTYGALGAFATGVGSTDCAAGMATGEAWFRVPETLKFVFHGTK 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
Y+ KDLIL IIG+I V GA YK+MEF G ++ LSM+ R+T+CNM +EAGGK G++
Sbjct: 170 FQPYVGGKDLILYIIGKIGVDGARYKAMEFAGNGIKALSMDNRLTMCNMAIEAGGKAGII 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y++ + Y+ +SD A + Y F+ + +A PH P+N E K
Sbjct: 230 EPDEITLEYVKARAKRDYKVYHSDPDAVYEKVYEFNTEDIPLQIAFPHLPENTKSVDEAK 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+KID+V IGSCT G+ ED A++ GKK+ + + P TQ + ++ +
Sbjct: 290 GLKIDQVVIGSCTNGRLEDLEITARIM--KGKKIHPNIRCLIFPGTQDILLEAMS----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ Q EAG ++P+CG CLGG A+ +++
Sbjct: 343 ---RGWIQTMIEAGAAV-STPTCGPCLGGHMGILAKGERALST 381
>gi|187934315|ref|YP_001884557.1| 3-isopropylmalate dehydratase large subunit [Clostridium botulinum
B str. Eklund 17B]
gi|226735954|sp|B2TIQ9.1|LEUC_CLOBB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|187722468|gb|ACD23689.1| 3-isopropylmalate dehydratase, large subunit [Clostridium botulinum
B str. Eklund 17B]
Length = 419
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 221/395 (55%), Gaps = 25/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + VN+D+++ +D+ P + FKK FG + KV+++ +
Sbjct: 2 GMTMTQKILAAHAGLESVKAGQLIEVNLDLVLGNDITTPVAINEFKK-FGVD-KVFNKSQ 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L +
Sbjct: 60 IAIVPDHFTPNKDIKAAEQVKYVREFSNKMGIENFFEVGEMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F+L +
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGQTWFKVPSAIKFILKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AKWVSGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL++ T +E +DE A + +++ L P V+ PH PDN D
Sbjct: 230 VDDKTVEYLKEHTKKEWEVYKADEDAEYDEVIEIELNTLRPTVSFPHLPDNTRTIDNVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ D A + GKKVK + ++P TQ +++
Sbjct: 290 IDIDQVVIGSCTNGRISDLRIARDIL--KGKKVKKGIRCIVIPGTQNIYLQALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + EAG ++P+CG CLGG A+
Sbjct: 342 --EGIIKDLIEAGV-VVSTPTCGPCLGGHMGILAK 373
>gi|386002211|ref|YP_005920510.1| 3-isopropylmalate dehydratase large subunit [Methanosaeta
harundinacea 6Ac]
gi|357210267|gb|AET64887.1| 3-isopropylmalate dehydratase large subunit 1 [Methanosaeta
harundinacea 6Ac]
Length = 412
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 218/385 (56%), Gaps = 30/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDREK 127
T++EKIFSRAS + G+ V VD M+HD G+ + K F E + +VWD E+
Sbjct: 3 TISEKIFSRASGH-RAEAGEIVEAEVDYAMSHD----GTSVLAIKAFTEMGSERVWDPER 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV+ DH + ++ A ++R + +Q I +F++ +G+CH +
Sbjct: 58 IVVPFDHIVPANNSTAADLQRMVRSWARDQGIVHFFE-----------GGRGICHQVFPE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG PG +L+G DSH+CT GAFG F TG+G TD + G++ KVP T+ + G +
Sbjct: 107 EGFALPGTLLVGADSHSCTYGAFGAFGTGVGATDMAEIYSRGRLWFKVPETIAVRISGRL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ +LAKDL L ++G I GATY+++E++G TVE LS+ RMTLCNM VE G K +VP
Sbjct: 167 GEMVLAKDLTLMLVGAIGADGATYRALEYLGETVESLSISGRMTLCNMGVEMGAKAAIVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
ADGTT +YL + PY+PV SD S+ +E FD+S L P VA P D +
Sbjct: 227 ADGTTEEYLRGRARGPYQPVRSD-PGSYDAEMEFDVSDLSPQVAVPFRVDQVRPVGDLAG 285
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
++D+V+IG+CT G+ ED AA++ G++VK T ++PA+++V + + V +
Sbjct: 286 TEVDQVFIGTCTNGRLEDLEIAARIL--KGREVKARTLVIPASREVLLQALSSGVLEALV 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ + I +P CG CLG
Sbjct: 344 RAGAMI---------GTPGCGPCLG 359
>gi|295102380|emb|CBK99925.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium
prausnitzii L2-6]
Length = 419
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 216/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT T+KI + + ++ G + +DI++ +D+ P + F+K G N V+D+E
Sbjct: 2 GMTQTQKILAAHAGLAEVKAGQLINAKLDIVLGNDITTPVAINEFEKA-GFN-DVFDKEH 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D ++ R+F + +I FYD+ +G + H L +
Sbjct: 60 IAIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G++
Sbjct: 110 KGIVTAGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGMAWFKVPAAIKFVLTGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KDLIL IIG I V GA YKSMEF G V LSM++R+++CNM +EAG KNG+ P
Sbjct: 170 PPKVSGKDLILHIIGMIGVDGALYKSMEFTGPGVASLSMDDRLSICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YLE ++ EPV+ +D A + D+S LEP V+ PH P+N A E
Sbjct: 230 VDDVTRAYLEGRSQ--REPVFYEADPDAEYEKTIEIDLSALEPTVSYPHLPENTHPASEG 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD+KID+V IGSCT G+ ED AA + V ++PAT V+ +
Sbjct: 288 KDIKIDQVVIGSCTNGRLEDMEAAYNILKGKHIAKGVRGIIIPATMAVYKECIL------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AGC ++P+CG CLGG
Sbjct: 342 --RGWTTAFIDAGC-IVSTPTCGPCLGG 366
>gi|257461057|ref|ZP_05626155.1| 3-isopropylmalate dehydratase large subunit [Campylobacter gracilis
RM3268]
gi|257441431|gb|EEV16576.1| 3-isopropylmalate dehydratase large subunit [Campylobacter gracilis
RM3268]
Length = 421
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 225/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K + G + +D+++ +D+ P S F E K+ + +
Sbjct: 4 TITEKIFSEHVGKAVFA-GQIIESTIDMVIGNDITTPISIKQF--ELSGAKKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI T D + I R+F + ++K ++D KD+G + H + ++G
Sbjct: 61 IVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMG----------IEHALMPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD F + TGK KVPPT++ + G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAFAMITGKNWFKVPPTIKVIFHGKPAP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I I V GA YK++EF G +E L M+ R +LCNM +EAGGK+G+V D
Sbjct: 171 HIYGKDLILEVIRLIGVDGARYKALEFCGDALEYLDMDSRFSLCNMAIEAGGKSGIVAVD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T ++L DK +L EP YSDE A++ + D+SKL+P++A P P N RE
Sbjct: 231 EITKEFLADK-NLRAEPKFHYSDEGANYEQILQIDVSKLDPVIAYPFLPSNGKSVREAVR 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ +D+V+IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 290 DDIAVDQVFIGSCTNGRLSDLRIAAQIL--KGRKVARKTRLIITPATQKIAL-------- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAQKEGLWDIFVEAGA-VVSNPTCGACLGG 368
>gi|389575799|ref|ZP_10165827.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium
cellulosolvens 6]
gi|389311284|gb|EIM56217.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium
cellulosolvens 6]
Length = 421
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 224/391 (57%), Gaps = 31/391 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGI---FKKEFGENAKVWD 124
MT+T+KI + A+ + G + N+D+++ +D+ P + + F+K+ +V+D
Sbjct: 2 GMTMTQKILAHAARLDHVEAGQLIEANLDLVLGNDITTPVAIDVMDGFQKQ-----QVFD 56
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
++KI ++ DH+I D ++ + +R+F + +I ++D+ ++G + H
Sbjct: 57 KDKIALVMDHFIPNKDIKSAEHCKQVREFSKKYDITNYFDVGEMG----------IEHAL 106
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L + G G++++G DSHTCT GA G F+TG+G+TD + TGK KVP ++ VL
Sbjct: 107 LPERGLVVAGDIVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKVVLK 166
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G+ ++ KD+IL +IGEI V GA YKS+EF G V LSM++R+T+ NM +EAGGKNG
Sbjct: 167 GKKNKWVSGKDVILHLIGEIGVDGALYKSLEFTGEGVADLSMDDRLTIANMAIEAGGKNG 226
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
+ P D T Y+++ ++ PY +D A + D+S L+ V+ PH P+N
Sbjct: 227 IFPVDDVTVAYMKEHSTKPYTVYEADADAEYERTIEIDLSTLKSTVSFPHLPENTKTIGS 286
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
+VK+D+ IGSCT G+ +D AA++ G+KV V ++PATQK+++
Sbjct: 287 FDEVKVDQSVIGSCTNGRIQDLREAAEIL--KGRKVANDVRCIIIPATQKIYLQALR--- 341
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 -----EGLLEIFIEAGA-VVSTPTCGPCLGG 366
>gi|289597138|ref|YP_003483834.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|289534925|gb|ADD09272.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 429
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 218/393 (55%), Gaps = 28/393 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + K + GD V VD+ M D GP S + + + G +V+D++ V
Sbjct: 14 TMAEKIIGEHAGK-DVKAGDIVVAKVDVAMVQDGTGPLSVQVLE-DMGL-VQVFDKKNTV 70
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + ILR+F E+ Y D+ + GVCH L E
Sbjct: 71 LFLDHATPSPRKELSNAHKILREFS-EKTGAYLSDVGE-----------GVCHQRLV-ES 117
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT+GA G FATG+G+TD GKV L+VP T RF ++G+ P
Sbjct: 118 WASPGQLIVGADSHTCTSGALGAFATGMGSTDVAIAFALGKVWLRVPETHRFYIEGKFPK 177
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL IIG I GATYKSMEF G T++++SME R T+ NM +EAGGK G++ D
Sbjct: 178 GVYSKDLILHIIGTIGADGATYKSMEFYGPTIDKMSMESRFTITNMAIEAGGKTGMIAPD 237
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
TT KYLE+ Y + SD+ A F EY F++ +LEP V+ PH+ DN E K
Sbjct: 238 ATTKKYLEEMGRGEKYREIKSDDDAWFEKEYEFNVDELEPTVSFPHTVDNTRTISEAKKM 297
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+++ID+VYIG+CT G+ ED AAK+ + K ++PA+++V++
Sbjct: 298 NIRIDQVYIGTCTNGRIEDLRVAAKILDGNKVNKKTRLIVIPASRRVYIQALK------- 350
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ + F EAG SP CG C+G K A
Sbjct: 351 -EGLLEKFVEAGAAIE-SPGCGPCVGIHKGVLA 381
>gi|291458973|ref|ZP_06598363.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418227|gb|EFE91946.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 421
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 220/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + ++ G + N+D++ +D+ P + KK V+DR+K
Sbjct: 2 GMTMSQKILAAHAGLDEVLAGQLIEANIDLVHGNDITSPLAIREMKKL--RKKTVFDRDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DH++ D + + I R+F EQ + +++D+ ++G + H + +
Sbjct: 60 VVLVMDHFVPNKDIVSAKCTQICRNFAAEQELSHYFDVGNMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE+ +G DSHTCT GA G F+TG+G+TD + TGK+ KVP +R L+G++
Sbjct: 110 QGLITAGELSVGADSHTCTYGALGAFSTGVGSTDMAAAMATGKLWFKVPAAIRVRLEGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDLIL +IGEI V GA Y+S+EF G V LSM++R T+CNM +EAG KNG+ P
Sbjct: 170 SPHVSGKDLILHLIGEIGVDGARYESLEFCGEGVSSLSMDDRFTICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+ + + ++ +D A + E D+SKL P VA PH P+N
Sbjct: 230 VDERTLRYIREHGNRSFQSFEADPDARYEREILLDLSKLRPTVAFPHLPENTKEIGSFPP 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+ ID+V IGSCT G+ +D A ++ G+KV V ++PATQ+++++
Sbjct: 290 ISIDQVVIGSCTNGRLQDIREAGEIL--KGRKVAKNVRCIVIPATQRIYLEALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGWIKAFIEAGA-VVSTPTCGPCLGG 366
>gi|357056679|ref|ZP_09117716.1| 3-isopropylmalate dehydratase large subunit [Clostridium
clostridioforme 2_1_49FAA]
gi|355379846|gb|EHG26996.1| 3-isopropylmalate dehydratase large subunit [Clostridium
clostridioforme 2_1_49FAA]
Length = 420
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 219/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + ++ G + ++D+++ +D+ P + KK + V+D++K
Sbjct: 2 GMTMSQKILAAHAGLEEVKAGQLIEADLDLVLGNDITSPVAINEMKKM--DRKTVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N R+F I ++D+ ++G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAENCKCCREFACRHEITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGRAWFKVPSAIKFELVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 SKWVSGKDVILHIIGMIGVDGALYKSMEFVGEGIRNLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+++ + + +DE A + Y D+S+L+P V+ PH P N + D
Sbjct: 230 VDELAAEYMKEHSKRGFTAYKADEDAEYDETYVIDLSQLKPTVSFPHLPSNTRTIDQAGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VK+D+ IGSCT G+ ED AAKV G+K+ V ++PATQ +++
Sbjct: 290 VKVDQAVIGSCTNGRIEDMRIAAKVL--KGRKIAKGVRCIVIPATQSIYLQAMR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 --EGLLEIFIEAGA-VVSTPTCGPCLGG 366
>gi|237735177|ref|ZP_04565658.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229381953|gb|EEO32044.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 422
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 217/397 (54%), Gaps = 29/397 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ + + G + +D++M +D+ GP + IF + KV+DR+K+
Sbjct: 1 MTMTQKILAKHAGLDAVVAGQLIEAKLDVVMANDITGPMALPIFHQM---ADKVFDRDKV 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+++PDH+ D ++ N + DF +Q + + + G V H L ++
Sbjct: 58 ILVPDHFTPNKDIKSAENSKAILDFSNDQCLTHHMEQGKCG----------VEHAILPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 108 GIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKPS 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL II I V GA YKSMEFVG ++ L+M++R T+CNM +EAG KNG+ P
Sbjct: 168 QFVSGKDIILDIITRIGVDGARYKSMEFVGEGIQHLTMDDRFTICNMAIEAGAKNGIFPV 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
D T Y+E + Y +DE A + D+ K+ P VA PH P N E +
Sbjct: 228 DEQTIAYMEKHSVKEYAVYEADEDAEYDEVIEIDLGKVRPTVAFPHLPGNGHTIDEIEAM 287
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
+ ID+V IGSCT G+ D AA + GK+V V +VPATQK+++
Sbjct: 288 DKIMIDQVVIGSCTNGRLSDLRKAAAIL--KGKQVAKNVRVMVVPATQKIFVQCIH---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 342 ----EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 373
>gi|254166982|ref|ZP_04873835.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197623838|gb|EDY36400.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 419
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 217/393 (55%), Gaps = 28/393 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + K + GD V VD+ M D GP S + + + G +V+D++ V
Sbjct: 4 TMAEKIIGEHAGK-DVKAGDIVVAKVDVAMVQDGTGPLSVQVLE-DMGL-VQVFDKKNTV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + ILR+F E+ Y D+ + GVCH L E
Sbjct: 61 LFLDHATPSPRKELSNAHKILREFS-EKTGAYLSDVGE-----------GVCHQRLV-ES 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT+GA G FATG+G+TD GKV L+VP T RF ++G P
Sbjct: 108 WASPGQLIVGADSHTCTSGALGAFATGMGSTDVAIAFALGKVWLRVPETHRFYIEGNFPK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL IIG I GATYKSMEF G T++++SME R T+ NM +EAGGK G++ D
Sbjct: 168 GVYSKDLILHIIGTIGADGATYKSMEFYGPTIDKMSMESRFTITNMAIEAGGKTGMIAPD 227
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
TT KYLE+ Y + SD+ A F EY F++ +LEP V+ PH+ DN E K
Sbjct: 228 ATTKKYLEEMGRGDKYREIKSDDDAWFEKEYEFNVDELEPTVSFPHTVDNTRTISEAKKM 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+++ID+VYIG+CT G+ ED AAK+ + K ++PA+++V++
Sbjct: 288 NIRIDQVYIGTCTNGRIEDLRVAAKILDGNKVNKKTRLIVIPASRRVYIQALK------- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ + F EAG SP CG C+G K A
Sbjct: 341 -EGLLEKFVEAGAAIE-SPGCGPCVGIHKGVLA 371
>gi|291529382|emb|CBK94968.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium rectale
M104/1]
Length = 420
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 221/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + +S G + ++D+++ +D+ P + K E V++++K
Sbjct: 2 GMTMTQKILAAHAGLDSVSAGQLIEADLDLVLGNDITSPVAIHEIDKMKVEG--VFNKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ + +R+F + I ++D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAEHCKCVREFACKNEITNYFDVGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F + G+
Sbjct: 110 QGLTVAGDVIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKFNIVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 170 AEWISGKDVILHIIGMIGVDGALYKSMEFVGDGLKYLSMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + P+ +D A + EY D+S L+ V+ PH PDN E D
Sbjct: 230 VDDLTREYMKKHSKRPFTEYEADSDAEYDEEYTIDLSTLKSTVSFPHLPDNTRTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ +D AAK+ GKKV + ++PATQK+++
Sbjct: 290 VKIDQVVIGSCTNGRMDDLRIAAKIL--EGKKVADGIRVIVIPATQKIYLQAME------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 342 --EGLLKTFIEAGA-IVSTPTCGPCLGG 366
>gi|126698574|ref|YP_001087471.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
630]
gi|255100025|ref|ZP_05329002.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
QCD-63q42]
gi|255305912|ref|ZP_05350084.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
ATCC 43255]
gi|123067011|sp|Q18AJ2.1|LEUC_CLOD6 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|115250011|emb|CAJ67831.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
630]
Length = 425
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 222/393 (56%), Gaps = 30/393 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ ++ ++ G + ++D+++ +D+ P + F+K E+ V+D+ K
Sbjct: 2 GMTMTQKILAKHAKLNEVKKGQLIEADLDVVLGNDITSPVAIREFEKLGIED--VYDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DH+ D ++ R F + + F+D+ D+G + H+ L +
Sbjct: 60 VVMVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 110 KGIVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIGEI V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P
Sbjct: 170 NKWISGKDIILHIIGEIGVDGALYKSMEFCGDGVEYLSMDDRFTICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDK---TSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+ T +Y +DE A + Y D++KL+ VA PH P+N
Sbjct: 230 VDDKTMEYINSHKCSTMTKDVNIYEADEDAVYDEVYEIDLAKLKETVAFPHLPENTRTVD 289
Query: 364 EC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
E KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 290 EIDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE- 346
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 347 -------KGYITTFIEAGA-AVSTPTCGPCLGG 371
>gi|159905577|ref|YP_001549239.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C6]
gi|159887070|gb|ABX02007.1| homoaconitate hydratase family protein [Methanococcus maripaludis
C6]
Length = 418
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 217/397 (54%), Gaps = 37/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K + GD+V ++VDI MTHD P + F++ KVWD EKI
Sbjct: 1 MTLAEKIISKNVGK-NVYAGDSVEIDVDIAMTHDGTTPLTVKAFEQI---TDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH I + +A I R+F +Q IK +Y D +G+CH L ++
Sbjct: 57 VIIFDHNIPANTSKAANMQLITREFIKKQGIKNYY-----------LDGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD G+V TGK L+VP T+R + GE
Sbjct: 106 GHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ E+ GATY S+E+ G V+ L M+ERM L NM +E GGK G++ A
Sbjct: 166 N-ISGKDIILKTCKEVGRRGATYMSLEYAGNAVQNLDMDERMVLSNMAIEMGGKAGIIEA 224
Query: 309 DGTTFKYLEDK-------TSLPYEPVYSDE-KASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT++YLE+ +L + +E + ++ FDI +E +A PH PDN
Sbjct: 225 DDTTYRYLENAGVSREEILNLKKNKITVNESEENYYKTVEFDIIDMEEQIACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVWMDVY 418
E ++D+V+IGSCT G+ D AA+ GKKV T L +PA++ ++ +
Sbjct: 285 GVSEVSGTELDQVFIGSCTNGRLNDLRTAARYL--KGKKVNESTRLIVIPASKSIFKEAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ IF ++G +P CG CLG +
Sbjct: 343 K--------EGLIDIFVDSGA-LICTPGCGPCLGAHQ 370
>gi|330836295|ref|YP_004410936.1| 3-isopropylmalate dehydratase large subunit [Sphaerochaeta
coccoides DSM 17374]
gi|329748198|gb|AEC01554.1| 3-isopropylmalate dehydratase, large subunit [Sphaerochaeta
coccoides DSM 17374]
Length = 422
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 222/404 (54%), Gaps = 31/404 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + + G + +VD+++ +D+ P + G F K FG ++D++K+
Sbjct: 3 MTMTEKILAAHCGQTSVKAGQLIMADVDMVLGNDITAPVAIGEFGK-FGAG-TIFDKKKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D +A LR+F ME +I+ ++++ +G + H L ++
Sbjct: 61 ALVPDHFTPAKDIKAALQCQCLRNFAMEHDIENYFEVGRVG----------IEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TGK KVP +++F L G +
Sbjct: 111 GLVNAGDLIIGADSHTCTYGALGAFSTGVGSTDMACGMATGKAWFKVPQSIKFNLTGTLG 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG I V GA Y SME+ G V LS+++R T+ NM +EAG KNG+ P
Sbjct: 171 KYVCGKDVILHIIGMIGVDGALYGSMEYSGPGVASLSIDDRFTMANMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLE---DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL ++ + YE +D A + D+S + P VA PH P N E
Sbjct: 231 DEVTLAYLAAHCKRSPVIYE---ADSDAQYTRVIDIDLSSIRPTVAFPHLPSNTRTIDET 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
VK+D+V IGSCT G D AA++ G+KV V T ++PATQ++W+
Sbjct: 288 GTVKVDQVVIGSCTNGHISDLRQAAEIL--KGRKVAPWVRTIILPATQEIWLQAME---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ +IF +AG ++P+CG CLGG A +A+
Sbjct: 342 ----EGLFRIFVDAGAAV-STPTCGPCLGGHMGILAAGERAVAT 380
>gi|365841967|ref|ZP_09383011.1| 3-isopropylmalate dehydratase, large subunit [Flavonifractor
plautii ATCC 29863]
gi|364576609|gb|EHM53925.1| 3-isopropylmalate dehydratase, large subunit [Flavonifractor
plautii ATCC 29863]
Length = 419
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 211/387 (54%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI +R + + PG V +D+++ +D+ P + F K +V+DREKI
Sbjct: 3 MTMTQKILARHAGLEHVVPGQLVEGKLDLVLGNDITTPVAIAEFNK--AGLTQVFDREKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DHY D +A + +R+F +I +FYD+ +G V H L ++
Sbjct: 61 ALVLDHYTPCKDIKAAQLCAQVREFAKRFDITHFYDVGCMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TG ++P ++ L G++
Sbjct: 111 GLTAPGEAMIGADSHTCTYGAVNMFSTGVGSTDMAAGMATGLAWFRIPSAIKVTLKGKLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL +IG I V GA YKS+EF G V LSM++R T+ NM +EAG KNG+ P
Sbjct: 171 PCVSGKDVILHLIGTIGVDGALYKSLEFGGKGVASLSMDDRFTIANMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL+ + + +E V D A + E D+ L+P VA PH P N +
Sbjct: 231 DDKTRAYLDGRVTRAWEAVEPDADAEYEREVVIDLDTLQPTVALPHLPSNTRTVDQAAGT 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ ED AA V G+KV V ++PATQ++ +D
Sbjct: 291 HIDQVVIGSCTNGRLEDLRQAAAVL--KGRKVAAGVRCIVIPATQQITLDAMA------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q F EAGC ++P+CG CLGG
Sbjct: 342 -EGLIQTFIEAGCAV-STPTCGPCLGG 366
>gi|302671014|ref|YP_003830974.1| 3-isopropylmalate dehydratase large subunit [Butyrivibrio
proteoclasticus B316]
gi|302395487|gb|ADL34392.1| 3-isopropylmalate dehydratase large subunit LeuC [Butyrivibrio
proteoclasticus B316]
Length = 423
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 220/386 (56%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + ++ G + ++D+++ +D+ P + +K E V+D++KI
Sbjct: 4 MTMSQKILAAHAGLTEVHAGQLIEADLDLVLGNDITSPVAIKELQKFTKEG--VFDKDKI 61
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH++ D ++ N +R+F ++ I ++++ +G + H L ++
Sbjct: 62 ALVPDHFVPNKDIKSAENCKCVREFAIKNKITNYFEVGKMG----------IEHALLPEQ 111
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TGIG+TD + TGK KVP ++F + G+
Sbjct: 112 GLTVAGDLIIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKAWFKVPSAIKFNIIGKPS 171
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGKNG+ P
Sbjct: 172 KWVSGKDVILHIIGLIGVDGALYKSMEFVGEGIKNLSMDDRFTIANMAIEAGGKNGIFPV 231
Query: 309 DGTTFKYLEDKTSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D Y+++ VY +DE A + EY D+S L P VA PH P+N + +D
Sbjct: 232 DDIAMTYMKEHAPNRQFTVYEADENAEYDEEYTIDLSALTPTVAFPHLPENTHTFDDIED 291
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+V IGSCT G+ +D AA+V V ++PATQK+++
Sbjct: 292 IKIDQVVIGSCTNGRIDDLRIAAEVLTDHRVADGVRCIVIPATQKIYLQAME-------- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F EAG ++P+CG CLGG
Sbjct: 344 EGLIKTFIEAGA-IVSTPTCGPCLGG 368
>gi|365831894|ref|ZP_09373439.1| 3-isopropylmalate dehydratase, large subunit [Coprobacillus sp.
3_3_56FAA]
gi|365261288|gb|EHM91214.1| 3-isopropylmalate dehydratase, large subunit [Coprobacillus sp.
3_3_56FAA]
Length = 424
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 218/398 (54%), Gaps = 29/398 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI ++ + + G + +D++M +D+ GP + IF + KV+D++K
Sbjct: 2 AMTMTQKILAKHAGLDAVVAGQLIEAKLDVVMANDITGPMALPIFHQM---ADKVFDKDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++++PDH+ D ++ N + DF +Q + + + G V H L +
Sbjct: 59 VILVPDHFTPNKDIKSAENSKAILDFSNDQCLTHHMEQGKCG----------VEHAILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 109 KGIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL II I V GA YKSMEFVG ++ L+M++R T+CNM +EAG KNG+ P
Sbjct: 169 SQFVSGKDIILDIITRIGVDGARYKSMEFVGEGIQHLTMDDRFTICNMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK- 366
D T Y+E + Y +DE A + D+ K+ P VA PH P N E +
Sbjct: 229 VDEQTIAYMEKHSVKEYTVYEADEDAEYDEVIEIDLGKVRPTVAFPHLPGNGHTIDEIEA 288
Query: 367 --DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
+ ID+V IGSCT G+ D AA + GK+V V +VPATQK+++
Sbjct: 289 MDKIMIDQVVIGSCTNGRLSDLRKAAAIL--KGKQVAKNVRVMVVPATQKIFVQCIH--- 343
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 344 -----EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 375
>gi|402547671|ref|ZP_10844537.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter sp.
FOBRC14]
gi|401016038|gb|EJP74810.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter sp.
FOBRC14]
Length = 421
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 226/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ + + +D+++ +D+ P S F++ K+ + E
Sbjct: 4 TITEKIFSDHVGR-EVFANEIIESGIDMVIGNDITTPISIKQFERSGA--TKLANPEGFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I RDF + ++KYF+D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDILSANQAKISRDFAYKHDLKYFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVPPT++ V G++
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPPTIKVVFRGKLGR 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G T++ L M+ R ++CNM +EAGGK+G++ D
Sbjct: 171 HVYGKDLILEIIRQIGVDGARYKALEFCGETIDALDMDGRFSMCNMAIEAGGKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
TT ++L+ K +L EP YSDE A + D KL+P++A P P N RE
Sbjct: 231 ETTREFLKGK-NLRAEPKFFYSDEGAGYERVLEIDADKLDPVIAYPFLPSNGKSVREAVK 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 290 DDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVSRKTRLIITPATQKIAL-------- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAQKEGLMDIFVEAGA-VVSNPTCGACLGG 368
>gi|379335422|gb|AFD03402.1| 3-isopropylmalate dehydratase large subunit [uncultured archaeon
W5-61a]
Length = 425
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 205/352 (58%), Gaps = 12/352 (3%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G + MT+TEKI + + ++ PG V VD +M HD+ GP +F +K E++
Sbjct: 3 GMIIMGMTMTEKIIASHAGLEEVKPGQLVTAKVDKIMAHDITGPPAFNELRKHNLESS-- 60
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+ +I ++ DH + D + N +RDF E+ I F+DI G+ H
Sbjct: 61 VEPGRIALVLDHIVPPKDIDSTLNCMAVRDFAKEKGIDDFFDIG----------RGGIAH 110
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L +EG PG++++G DSHTCT GA G F+TG+G+TD + G+ L+VP ++ F
Sbjct: 111 NVLPEEGLVVPGDLVIGADSHTCTYGALGCFSTGMGHTDIAAAMVLGETWLRVPESMLFT 170
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
+G++ Y+ KD+IL IG+ISV GA YK+MEF+G+ ++ L ME+R T+ NMV+E GGK
Sbjct: 171 YNGKLGKYVSGKDMILATIGKISVNGADYKAMEFIGSAIDALPMEQRFTMTNMVIECGGK 230
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NG++ D T +Y+ +T YE SD+ + S + FD S +EPLVAKP SPDN +
Sbjct: 231 NGLMRIDQATREYVNARTKRDYEEYVSDDDVKYESYHEFDASAIEPLVAKPFSPDNVSPV 290
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW 414
+ KDVK+D+V+IGSCT G +D A+ + + ++PAT ++
Sbjct: 291 ADVKDVKVDQVFIGSCTNGWLDDLRQASYILEGEKLAKGLRLIVIPATMGIY 342
>gi|160940441|ref|ZP_02087786.1| hypothetical protein CLOBOL_05331 [Clostridium bolteae ATCC
BAA-613]
gi|158437021|gb|EDP14788.1| hypothetical protein CLOBOL_05331 [Clostridium bolteae ATCC
BAA-613]
Length = 420
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 219/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + ++ G + ++D+++ +D+ P + KK + V+D++K
Sbjct: 2 GMTMSQKILAAHAGLEEVKAGQLIEADLDLVLGNDITSPVAINEMKKM--DRKTVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N R+F I ++D+ D+G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAENCKCCREFACRHEITNYFDVGDMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFQLVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 AKWVSGKDVILHIIGMIGVDGALYKSMEFVGEGIRNLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+++ + + +DE A + Y D+S+L+P V+ PH P N + +
Sbjct: 230 VDELAVEYMKEHSKREFTVYEADEDAEYDETYVIDLSELKPTVSFPHLPSNTRTIDQVGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VK+D+ IGSCT G+ ED AA+V G+K+ V ++PATQ +++
Sbjct: 290 VKVDQAVIGSCTNGRIEDMRIAAEVL--KGRKIAKGVRCIVIPATQSIYLQAMK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 --EGLLEIFIEAGA-VVSTPTCGPCLGG 366
>gi|167757624|ref|ZP_02429751.1| hypothetical protein CLORAM_03174 [Clostridium ramosum DSM 1402]
gi|167702621|gb|EDS17200.1| 3-isopropylmalate dehydratase, large subunit [Clostridium ramosum
DSM 1402]
Length = 424
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 218/398 (54%), Gaps = 29/398 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+T+KI ++ + + G + +D++M +D+ GP + IF + KV+D++K
Sbjct: 2 AMTMTQKILAKHAGLDAVVAGQLIEAKLDVVMANDITGPMALPIFHQM---ADKVFDKDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++++PDH+ D ++ N + DF +Q + + + G V H L +
Sbjct: 59 VILVPDHFTPNKDIKSAENSKAILDFSNDQCLTHHMEQGKCG----------VEHAILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 109 KGIVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL II I V GA YKSMEFVG ++ L+M++R T+CNM +EAG KNG+ P
Sbjct: 169 SQFVSGKDIILDIITRIGVDGARYKSMEFVGEGIQHLTMDDRFTICNMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK- 366
D T Y+E + Y +DE A + D+ K+ P VA PH P N E +
Sbjct: 229 VDEQTIAYMEKHSVKEYAVYEADEDAEYDEVIEIDLGKVRPTVAFPHLPGNGHTIDEIEA 288
Query: 367 --DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
+ ID+V IGSCT G+ D AA + GK+V V +VPATQK+++
Sbjct: 289 MDKIMIDQVVIGSCTNGRLSDLRKAAAIL--KGKQVAKNVRVMVVPATQKIFVQCIH--- 343
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++IF EAGC +PSCG C+GG A+
Sbjct: 344 -----EGLAEIFVEAGC-AFNTPSCGPCMGGHMGVMAK 375
>gi|225018028|ref|ZP_03707220.1| hypothetical protein CLOSTMETH_01964 [Clostridium methylpentosum
DSM 5476]
gi|224949234|gb|EEG30443.1| hypothetical protein CLOSTMETH_01964 [Clostridium methylpentosum
DSM 5476]
Length = 421
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 218/387 (56%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + + G + +D++ +DV P + F+K V+D+ K+
Sbjct: 3 MTMSQKILAAHAGLDHVVAGQLIKAKLDLVHGNDVTTPVAINEFEKS--GFTSVFDKTKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+I DH+ D + V +R+F + ++ ++YD+ ++G + H + ++
Sbjct: 61 AMIMDHFTPNKDIKTAMMVKQVREFADQHDVLHYYDVGEMG----------IEHALIPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE+ +G DSHTCT GA G F+TG+G+TD + TG+ KVP +RF L G+
Sbjct: 111 GLVAAGELTIGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPSAIRFNLTGKPR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ L+M++R+ + NM +EAGGKNG+
Sbjct: 171 KWVSGKDVILHIIGMIGVDGALYKSMEFGGEGLKNLTMDDRLCMANMAIEAGGKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++DK + PY D A + + Y D+S+++ V+ PH PDN E DV
Sbjct: 231 DEVTIAYMKDKVNRPYTAYAPDPDAEYDAVYDIDLSQIKSTVSFPHLPDNTRTIDEVGDV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ D AAK+ GK+V V ++PATQK++++ L
Sbjct: 291 KIDQVVIGSCTNGRLSDIAVAAKIL--EGKQVAKHVRAIVIPATQKIYLEALKLGY---- 344
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AGC ++P+CG CLGG
Sbjct: 345 ----LETFVKAGC-VVSTPTCGPCLGG 366
>gi|340624790|ref|YP_004743243.1| aconitase family protein [Methanococcus maripaludis X1]
gi|339905058|gb|AEK20500.1| aconitase family protein [Methanococcus maripaludis X1]
Length = 418
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 217/397 (54%), Gaps = 37/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K + D+V ++VDI MTHD P + F++ + KVWD EKI
Sbjct: 1 MTLAEKIISKNVGK-NVYAKDSVEISVDIAMTHDGTTPLTVKAFEQI---SDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH I + +A I R+F +Q IK +Y D +G+CH L ++
Sbjct: 57 VIIFDHNIPANTSKAANMQVITREFIKKQGIKNYY-----------LDGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD G+V TGK L+VP T+R + GE
Sbjct: 106 GHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ E+ GATY S+E+ G V LSM+ERM L NM +E GGK G++ A
Sbjct: 166 N-ISGKDIILKTCKEVGRRGATYMSLEYCGNAVHNLSMDERMVLSNMAIEMGGKAGIIEA 224
Query: 309 DGTTFKYLEDK-------TSLPYEPVYSDE-KASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT++YLE+ L + DE + + FDI+ +E VA PH PDN
Sbjct: 225 DDTTYRYLENAGVSREEILELKKNKITVDESEEDYYKTIEFDITDMEEQVACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVWMDVY 418
E + ++++V+IGSCT G+ D AAK GKKV T L +PA++ ++ +
Sbjct: 285 GVSEVEGTELNQVFIGSCTNGRLNDLRIAAKYL--KGKKVNENTRLIVIPASKSIFKEAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ IF ++G +P CG CLG +
Sbjct: 343 N--------EGLIDIFVDSGA-LICTPGCGPCLGAHQ 370
>gi|325970785|ref|YP_004246976.1| 3-isopropylmalate dehydratase large subunit [Sphaerochaeta globus
str. Buddy]
gi|324026023|gb|ADY12782.1| 3-isopropylmalate dehydratase large subunit [Sphaerochaeta globus
str. Buddy]
Length = 422
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 215/390 (55%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + PG + ++D+++ +D+ P + F K FG+ V+D++K
Sbjct: 2 GMTMTQKILAHHANMESVRPGQLIMADLDMVLGNDITAPVAINEFPK-FGKQT-VFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++PDH+ D +A LRDF + I ++D+ +G + H L +
Sbjct: 60 VALVPDHFSPNKDIKAAEQCKCLRDFANDHEITNYFDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G++++G DSHTCT GA G F+TG+G+TD + TG+ KVP L+F L G+
Sbjct: 110 KGLVGAGDLVIGADSHTCTYGALGAFSTGVGSTDMACGMATGQAWFKVPSALKFNLKGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KDLIL IIG I V GA Y+SMEF G V L++++R T+ NM +EAG KNG+ P
Sbjct: 170 NRYVSGKDLILHIIGMIGVDGALYQSMEFTGEGVANLTIDDRFTVANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL K EPV +D+ A + + + D+S ++ V+ PH P N E
Sbjct: 230 VDDITLAYL--KEHCRKEPVIYTADDDAHYETVFDIDLSTIKSTVSFPHLPSNTRTIDEV 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
+V+ID+V IGSCT G D AA + GK+V V + PATQK+W
Sbjct: 288 GEVRIDQVVIGSCTNGHISDLREAAAIL--KGKRVAKHVRALIFPATQKIWKQAMN---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF ++GC ++P+CG CLGG
Sbjct: 342 ----EGLFDIFVDSGC-AVSTPTCGPCLGG 366
>gi|224373754|ref|YP_002608126.1| 3-isopropylmalate dehydratase large subunit [Nautilia profundicola
AmH]
gi|254809042|sp|B9L6Y8.1|LEUC_NAUPA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|223589147|gb|ACM92883.1| 3-isopropylmalate dehydratase, large subunit [Nautilia profundicola
AmH]
Length = 425
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 227/396 (57%), Gaps = 37/396 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKIF+ + ++ PG+ + +VD+ + +D+ P S F + E K+ +
Sbjct: 3 MTITEKIFAEHIGR-EVKPGEIIMCDVDMTIGNDITTPISIRAFNESGAE--KLAKPDNF 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH+I D + I RDF + ++K F+D KD+G + H L ++
Sbjct: 60 AIVLDHFIPPKDIASANQAKINRDFAYKHDLKNFFDEKDMG----------IEHRLLPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA G F+TG+G+TD F + TGK K+P +++ V GE
Sbjct: 110 GLVIPGDVIIGADSHTCTHGALGAFSTGMGSTDIAFCMITGKSWFKIPESIKVVFKGERG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDLIL++I I V GA YK++EF G +E L M++RM+LCNM +EAG KNG+V
Sbjct: 170 EHVYGKDLILELIRRIGVDGALYKALEFTGEVIENLPMDDRMSLCNMAIEAGAKNGIVAY 229
Query: 309 DGTTFKYLEDKTSLPYEPV-------YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RA 360
D T +LE+ Y P+ YSD A++ D++KLEPLVA P P N +
Sbjct: 230 DKITEAFLEEVKK--YNPLRSEPKIHYSDPDANYSQVIEIDVNKLEPLVAYPFLPSNGKP 287
Query: 361 LARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
+++ K D++ID+VYIGSCT G D AA++ GK+V +V + PATQ+++
Sbjct: 288 ISQAVKDDIEIDQVYIGSCTNGTLSDLRIAAEIL--KGKRVHRRVRLIVTPATQRIYKQ- 344
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + I +AG A+P+CGACLGG
Sbjct: 345 -------AEHEGILDILIDAGA-VVANPTCGACLGG 372
>gi|295103471|emb|CBL01015.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium
prausnitzii SL3/3]
Length = 419
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 216/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLT+KI + + P++ G + +DI++ +D+ P + F++ G N +V+D+E
Sbjct: 2 GMTLTQKILAAHAGLPEVKAGQLINAKLDIVLGNDITTPVAINEFERA-GFN-RVFDKEH 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D ++ R+F + +I FYD+ +G + H L +
Sbjct: 60 IAIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G+
Sbjct: 110 KGIVTAGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGMAWFKVPSAIKFVLTGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KDLIL IIG I V GA YKSMEF G V L+M++R+ +CNM +EAG KNG+ P
Sbjct: 170 NPRVSGKDLILHIIGMIGVDGALYKSMEFTGPGVAGLTMDDRLCICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL ++ P PV+ +D A + D+S LEP V+ PH P+N +A E
Sbjct: 230 VDEVTKAYLAGRSQRP--PVFYEADPDAVYEKTIEIDLSALEPTVSYPHLPENTHVASEG 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD+KID+V IGSCT G+ ED AA + V ++PAT V+ +
Sbjct: 288 KDIKIDQVVIGSCTNGRLEDMEAAYNILKGKHIAKGVRGIIIPATMAVYKECIL------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AGC ++P+CG CLGG
Sbjct: 342 --RGWTTAFIDAGC-IVSTPTCGPCLGG 366
>gi|257438586|ref|ZP_05614341.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium
prausnitzii A2-165]
gi|257198955|gb|EEU97239.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium
prausnitzii A2-165]
Length = 419
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 213/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLT+KI + + P++ G + +DI++ +D+ P + F+K + V+D+E
Sbjct: 2 GMTLTQKILAAHAGLPEVKAGQLINAKLDIVLGNDITTPVAINEFEKAGFDG--VFDKEH 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D ++ R+F + +I FYD+ +G V H L +
Sbjct: 60 IAIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G+
Sbjct: 110 KGIVTAGDCIIGADSHTCTYGALGAFSTGVGSTDMAAGMATGMAWFKVPSAIKFVLKGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KDLIL IIG I V GA YKSMEF G V L+ME+R+ +CNM +EAG KNG+ P
Sbjct: 170 SPRVSGKDLILHIIGMIGVDGALYKSMEFTGPGVASLTMEDRLCVCNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL ++ PVY +D A + D+ KLEP V+ PH P+N A E
Sbjct: 230 VDEVTRAYLNGRSQ--RTPVYYEADPDAEYEKTIEIDLDKLEPTVSYPHLPENTHPASEG 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD++ID+V IGSCT G+ ED AA + V ++PAT V+ +
Sbjct: 288 KDIRIDQVVIGSCTNGRLEDMEAAYNILKGKHIAKGVRGIIIPATMAVYKECIL------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++ F +AGC ++P+CG CLGG
Sbjct: 342 --RGWTEAFIDAGC-IVSTPTCGPCLGG 366
>gi|225390173|ref|ZP_03759897.1| hypothetical protein CLOSTASPAR_03923 [Clostridium asparagiforme
DSM 15981]
gi|225043767|gb|EEG54013.1| hypothetical protein CLOSTASPAR_03923 [Clostridium asparagiforme
DSM 15981]
Length = 446
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 219/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + ++ G + ++D+++ +D+ P + KK + V+D++K
Sbjct: 28 GMTMSQKILAAHAGLSEVKAGQLIEADLDLVLGNDITSPVAINEMKKI--DKQTVFDKDK 85
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N R+F I ++D+ D+G + H L +
Sbjct: 86 IALVMDHFIPNKDIKSAENCKCCREFACRHEITNYFDVGDMG----------IEHALLPE 135
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 136 KGLVVAGDAMIGADSHTCTYGALGAFSTGVGSTDMAAAMVTGKAWFKVPSAIKFELVGKP 195
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G V+ L+M++R T+CNM +EAGGKNG+ P
Sbjct: 196 GKWVSGKDVILHIIGMIGVDGALYKSMEFTGEGVKNLTMDDRFTICNMAIEAGGKNGIFP 255
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL++ + ++ +D A + + Y D+S+L+P V+ PH P N D
Sbjct: 256 VDEQTVAYLKEHSKRDFKVYEADPDAEYDATYVIDLSELKPTVSFPHLPSNTRTIDNVGD 315
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
VKID+ IGSCT G+ +D AA++ G+KV V ++PATQ +++
Sbjct: 316 VKIDQSVIGSCTNGRIDDMRVAAEIL--KGRKVAKNVRCIVIPATQAIYLQAMR------ 367
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 368 --EGLLEIFVEAGA-IVSTPTCGPCLGG 392
>gi|423090243|ref|ZP_17078551.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
70-100-2010]
gi|357556918|gb|EHJ38489.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
70-100-2010]
Length = 423
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 222/392 (56%), Gaps = 30/392 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ ++ ++ G + ++D+++ +D+ P + F+K E+ V+D+ K+
Sbjct: 1 MTMTQKILAKHAKLNEVKKGQLIEADLDVVLGNDITSPVAIREFEKLGIED--VYDKTKV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH+ D ++ R F + + F+D+ D+G + H+ L ++
Sbjct: 59 VMVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 109 GIVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKPN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIGEI V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P
Sbjct: 169 KWISGKDIILHIIGEIGVDGALYKSMEFCGDGVEYLSMDDRFTICNMAIEAGAKNGIFPV 228
Query: 309 DGTTFKYLEDK---TSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D T +Y+ T +Y +DE A + Y D+++L+ VA PH P+N E
Sbjct: 229 DDKTMEYINSHKCSTMTKDVNIYEADEDAVYDEVYEIDLAELKETVAFPHLPENTRTVDE 288
Query: 365 C-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 289 IDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE-- 344
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 345 ------KGYITTFIEAGA-AVSTPTCGPCLGG 369
>gi|134045144|ref|YP_001096630.1| 3-isopropylmalate dehydratase, large subunit [Methanococcus
maripaludis C5]
gi|132662769|gb|ABO34415.1| 2-oxosuberate synthase, isomerase large subunit [Methanococcus
maripaludis C5]
Length = 418
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 220/397 (55%), Gaps = 37/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K + GD+V ++VD+ MTHD P + F++ + KVWD EKI
Sbjct: 1 MTLAEKIISKNVGK-NVYAGDSVEIDVDVAMTHDGTTPLTVKAFEQI---SDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH I + +A I R+F +Q IK +Y D +G+CH L ++
Sbjct: 57 VIIFDHNIPANTSKAANMQVITREFIKKQGIKNYY-----------LDGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD G+V TGK L+VP T++ + GE
Sbjct: 106 GHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIQVNVTGENE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ E+ GATY S+E+ G V+ L M+ERM L NM +E GGK G++ A
Sbjct: 166 N-ISGKDIILKTCKEVGRRGATYLSLEYGGNAVQNLDMDERMVLSNMAIEMGGKAGIIEA 224
Query: 309 DGTTFKYLEDK-------TSLPYEPVYSDE-KASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT+KYLE+ +L + +E + ++ + FDI+ +E +A PH PDN
Sbjct: 225 DDTTYKYLENAGVSREEILNLKKNKIKVNESEENYYKTFEFDITDMEEQIACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVWMDVY 418
E +++D+V+IGSCT G+ D AAK GKKV T L +PA++ ++ +
Sbjct: 285 GVSEVSGIELDQVFIGSCTNGRLNDLRIAAKHL--KGKKVNESTRLIVIPASKSIFKEAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ F ++G +P CG CLG +
Sbjct: 343 K--------EGLIDTFVDSGA-LICTPGCGPCLGAHQ 370
>gi|168335047|ref|ZP_02693160.1| 3-isopropylmalate dehydratase, large subunit [Epulopiscium sp.
'N.t. morphotype B']
Length = 421
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 220/394 (55%), Gaps = 25/394 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + ++D+++ +D+ P + F K G +V+D+ K+
Sbjct: 3 MTMTQKILAAHAGLEYVEAGQLIEADLDLVLGNDITTPVAITEFNK-IGIT-EVFDKNKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+PDH+ D +A +R+F ++NI ++++ ++G + H + ++
Sbjct: 61 VIVPDHFAPAKDIQAATQCKCVREFANDKNITNYFEVGEMG----------IEHALIPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L +
Sbjct: 111 GLVVPGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPSAIKFNLINQPT 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG I V GA YKSMEFVG ++ LSM+ R T+ NM +EAG KNG+
Sbjct: 171 KYVSGKDIILHIIGMIGVDGALYKSMEFVGDGIQHLSMDSRFTMANMAIEAGAKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+ +T Y SD A + D+SK+ P V+ PHSPDN E ++
Sbjct: 231 DFITREYLKGRTDREYIVYTSDADAIYDEVITIDLSKVRPTVSCPHSPDNTXTLDELPEI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V IGSCT G+ ED A+ + GKKV V + P TQ++++D + +
Sbjct: 291 KIDQVVIGSCTNGRLEDLRMASDIL--KGKKVAKGVRAIVFPGTQQIYLDALAEGIVTN- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+AGC ++P+CG CLGG A+
Sbjct: 348 -------LVKAGC-VMSTPTCGPCLGGHMGILAK 373
>gi|45359043|ref|NP_988600.1| aconitase [Methanococcus maripaludis S2]
gi|45047918|emb|CAF31036.1| aconitase Family [Methanococcus maripaludis S2]
Length = 418
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 217/397 (54%), Gaps = 37/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K + D+V ++VDI MTHD P + F++ + KVWD EKI
Sbjct: 1 MTLAEKIISKNVGK-NVYAKDSVEISVDIAMTHDGTTPLTVKAFEQI---SDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH I + +A I R+F +Q IK +Y D +G+CH L ++
Sbjct: 57 VIIFDHNIPANTSKAANMQVITREFIKKQGIKNYY-----------LDGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P ++ G DSHTCT GAFG FATG G TD G+V TGK L+VP T+R + GE
Sbjct: 106 GHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ E+ GATY S+E+ G V LSM+ERM L NM +E GGK G++ A
Sbjct: 166 N-ISGKDIILKTCKEVGRRGATYMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEA 224
Query: 309 DGTTFKYLEDK-------TSLPYEPVYSDE-KASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT++YLE+ L + DE + + FDI+ +E VA PH PDN
Sbjct: 225 DDTTYRYLENAGVSREEILELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVWMDVY 418
E + ++++V+IGSCT G+ D AAK GKKV T L +PA++ ++ +
Sbjct: 285 GVSEVEGTELNQVFIGSCTNGRLNDLRIAAKYL--KGKKVNENTRLIVIPASKSIFKEAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ IF ++G +P CG CLG +
Sbjct: 343 N--------EGLIDIFVDSGA-LICTPGCGPCLGAHQ 370
>gi|269216667|ref|ZP_06160521.1| 3-isopropylmalate dehydratase, large subunit [Slackia exigua ATCC
700122]
gi|269129901|gb|EEZ60984.1| 3-isopropylmalate dehydratase, large subunit [Slackia exigua ATCC
700122]
Length = 422
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 216/399 (54%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + PG + ++D+ + +D+ GP S + ++ E +V+D+ K+
Sbjct: 3 MTMTQKILTAHAGLDSVVPGQLIEADIDLALANDITGPVSIRVLREADFE--QVFDKTKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D ++ +R+F ++ I FYD+ +G V H L ++
Sbjct: 61 ALVMDHFAPNKDIKSAEQCKEVREFALKHGIVNFYDVGTMG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ +VP L+F L G
Sbjct: 111 GLVASGDAIIGADSHTCTYGALGAFSTGVGSTDLAAGIATGRAWFRVPSALKFNLTGTPA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA Y+SMEF G V +LSM++R ++CNM +EAG KNG+ P
Sbjct: 171 PWVSGKDVILHIIGMIGVDGALYQSMEFAGPGVAKLSMDDRFSICNMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+E + +DE A++ + D+ + P VA PH P+N E +
Sbjct: 231 DDKTLAYMEGRAQHEPRIFAADEDAAYERVFDIDLGSIPPTVAAPHLPENTKPVTELAGI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
++D+ IGSCT G+ ED AAK+ V T ++PATQ +++ +
Sbjct: 291 RVDQSVIGSCTNGRIEDMRIAAKLLAGHTVSPHVRTIVMPATQHIYLQCIE--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
++IF EAG ++P+CG CLGG A +A+
Sbjct: 343 GLAKIFIEAGA-VISTPTCGPCLGGHMGILAAGERSIAT 380
>gi|402828441|ref|ZP_10877329.1| 3-isopropylmalate dehydratase, large subunit [Slackia sp. CM382]
gi|402286524|gb|EJU34995.1| 3-isopropylmalate dehydratase, large subunit [Slackia sp. CM382]
Length = 422
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 216/399 (54%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + PG + ++D+ + +D+ GP S + ++ E +V+D+ K+
Sbjct: 3 MTMTQKILAAHAGLDSVVPGQLIEADIDLALANDITGPVSIRVLREADFE--QVFDKTKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D ++ +R+F ++ I FYD+ +G V H L ++
Sbjct: 61 ALVMDHFAPNKDIKSAEQCKEVREFALKHGIVNFYDVGTMG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ +VP L+F L G
Sbjct: 111 GLVASGDAIIGADSHTCTYGALGAFSTGVGSTDLAAGIATGRAWFRVPSALKFNLTGTPA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA Y+SMEF G V +LSM++R ++CNM +EAG KNG+ P
Sbjct: 171 PWVSGKDVILHIIGMIGVDGALYQSMEFTGPGVAKLSMDDRFSICNMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y+E + +DE A++ + D+ + P VA PH P+N E +
Sbjct: 231 DDKTLAYMEGRAQHEPRIFAADEDAAYERVFDIDLGSIPPTVAAPHLPENTKPVTELAGI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
++D+ IGSCT G+ ED AAK+ V T ++PATQ +++ +
Sbjct: 291 RVDQSVIGSCTNGRIEDMRIAAKLLAGHTVSPHVRTIVMPATQHIYLQCIE--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
++IF EAG ++P+CG CLGG A +A+
Sbjct: 343 GLAKIFIEAGA-VISTPTCGPCLGGHMGILAAGERSIAT 380
>gi|254974538|ref|ZP_05271010.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
QCD-66c26]
gi|255091926|ref|ZP_05321404.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
CIP 107932]
gi|255313661|ref|ZP_05355244.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
QCD-76w55]
gi|255516345|ref|ZP_05384021.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
QCD-97b34]
gi|255649445|ref|ZP_05396347.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
QCD-37x79]
gi|384360192|ref|YP_006198044.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
BI1]
Length = 425
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 223/393 (56%), Gaps = 30/393 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ ++ ++ G + ++D+++ +D+ P + F+K E+ V+D+ K
Sbjct: 2 GMTMTQKILAKHAKLNEVKKGQLIEADLDVVLGNDITSPVAIREFEKLGIED--VYDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DH+ D ++ R F + + F+D+ D+G + H+ L +
Sbjct: 60 VVMVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 110 KGIVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIGEI V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P
Sbjct: 170 NKWISGKDIILHIIGEIGVDGALYKSMEFCGDGVEYLSMDDRFTICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLED-KTSLPYEPVY---SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+ K S + V +DE A + Y D+++L+ VA PH P+N
Sbjct: 230 VDDKTMEYINSHKCSTITKDVNIYEADEDAVYDEVYEIDLAELKETVAFPHLPENTRTVD 289
Query: 364 EC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
E KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 290 EIDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE- 346
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 347 -------KGYITTFIEAGA-AVSTPTCGPCLGG 371
>gi|296449710|ref|ZP_06891480.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
NAP08]
gi|296877973|ref|ZP_06901992.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
NAP07]
gi|296261434|gb|EFH08259.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
NAP08]
gi|296431041|gb|EFH16869.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
NAP07]
Length = 425
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 225/393 (57%), Gaps = 30/393 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ ++ ++ G + ++DI++ +D+ P + F+K E+ V+D+ K
Sbjct: 2 GMTMTQKILAKHAKLNEVKKGQLIEADLDIVLGNDITSPVAIREFEKLGIED--VYDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DH+ D ++ R F + + F+D+ D+G + H+ L +
Sbjct: 60 VVMVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 110 KGIVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P
Sbjct: 170 NKWISGKDIILHIIGKIGVDGALYKSMEFCGEGVEYLSMDDRFTICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDK--TSLPYE-PVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+ T++ + VY +DE A + Y D+++L+ VA PH P+N
Sbjct: 230 VDDKTIEYINSHKCTTITKDVNVYQADEDAVYDEVYEIDLAELKETVAFPHLPENTRTVD 289
Query: 364 EC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
E KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 290 EIDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE- 346
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 347 -------KGYITTFIEAGA-AVSTPTCGPCLGG 371
>gi|313114234|ref|ZP_07799782.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623428|gb|EFQ06835.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 419
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 214/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLT+KI + + ++ G + +DI++ +D+ P + F+K + V+D+E
Sbjct: 2 GMTLTQKILAAHAGLAEVKAGQLINAKLDIVLGNDITTPVAINEFEKAGFDG--VFDKEH 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D ++ R+F + +I FYD+ +G + H L +
Sbjct: 60 IAIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G+
Sbjct: 110 KGIVTAGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGMAWFKVPSAIKFVLKGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KDLIL IIG I V GA YKSMEF G V L+M++R+ +CNM +EAG KNG+ P
Sbjct: 170 GPRVSGKDLILHIIGMIGVDGALYKSMEFTGPGVASLTMDDRLCICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL+ ++ EPV+ +D A + D+ KLEP V+ PH P+N LA E
Sbjct: 230 VDDVTRSYLKGRSQ--REPVFFEADPDAEYEKTIEIDLDKLEPTVSYPHLPENTHLASEG 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD+KID+V IGSCT G+ ED AA V V ++PAT V+ +
Sbjct: 288 KDIKIDQVVIGSCTNGRLEDMEAAYNVLKGKHIAKGVRGIIIPATMAVYKECIL------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AGC ++P+CG CLGG
Sbjct: 342 --RGWTTAFIDAGC-IVSTPTCGPCLGG 366
>gi|295093381|emb|CBK82472.1| 3-isopropylmalate dehydratase, large subunit [Coprococcus sp.
ART55/1]
Length = 421
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 218/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + P + G + ++D+++ +DV P I + E +V+D++K
Sbjct: 2 GMTMTQKILAAHAGLPLVEAGQLIEADLDLVLGNDVTTP--VAIHEMEKFNKKEVFDKKK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ + +R F I+ ++D+ +G + H L +
Sbjct: 60 IALVMDHFTPNKDIKSAEHCKCVRQFSAANEIENYFDVGAMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE +G DSHTCT GA G F+TG+G+TD + TGK KVP ++F + GE
Sbjct: 110 KGLIVAGETCIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFNIVGEK 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+ NM +EAG KNG+ P
Sbjct: 170 AKWISGKDVILHIIGMIGVDGALYKSMEFVGEGIKNLTMDDRFTIANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ ++ Y +DE A + +EY D+S+L+P VA PH P+N E D
Sbjct: 230 VDELTEEYMKEHSTKSYTKYEADEDAVYDAEYTIDLSQLKPTVAFPHLPENTKTIDEVGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ D AA + G+KV V ++P TQ +++
Sbjct: 290 IKIDQVVIGSCTNGRISDMRIAADII--KGRKVADGVRVIVIPGTQDIYLQCIE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLMTIFVKAGA-VVSTPTCGPCLGG 366
>gi|373115321|ref|ZP_09529497.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371670613|gb|EHO35692.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 419
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 210/387 (54%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI +R + + PG V +D+++ +D+ P + F K +V+DREKI
Sbjct: 3 MTMTQKILARHAGLEHVVPGQLVEGKLDLVLGNDITTPVAIAEFNK--AGLTQVFDREKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DHY D +A + +R+F +I +FYD+ +G V H L ++
Sbjct: 61 ALVLDHYTPCKDIKAAQLCAQVREFAKRFDITHFYDVGCMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TG ++P ++ L G++
Sbjct: 111 GLTAPGEAMIGADSHTCTYGAVNMFSTGVGSTDMAAGMATGLAWFRIPSAIKVTLKGKLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL +IG I V GA YKS+EF G V LSM++R T+ NM +EAG KNG+ P
Sbjct: 171 PCVSGKDVILHLIGTIGVDGALYKSLEFGGEGVASLSMDDRFTIANMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL+ + + +E V D A + E D+ L+P VA PH P N +
Sbjct: 231 DDKTRAYLDGRVTRAWEAVEPDADAEYEREVVIDLDTLQPTVALPHLPSNTRTVDQAAGT 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ ED AA G+KV V ++PATQ++ +D
Sbjct: 291 HIDQVVIGSCTNGRLEDLRQAAAAL--KGRKVAAGVRCIVIPATQQITLDAMA------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q F EAGC ++P+CG CLGG
Sbjct: 342 -EGLIQTFIEAGCAV-STPTCGPCLGG 366
>gi|323486598|ref|ZP_08091919.1| hypothetical protein HMPREF9474_03670 [Clostridium symbiosum
WAL-14163]
gi|323692259|ref|ZP_08106500.1| 3-isopropylmalate dehydratase [Clostridium symbiosum WAL-14673]
gi|323399979|gb|EGA92356.1| hypothetical protein HMPREF9474_03670 [Clostridium symbiosum
WAL-14163]
gi|323503674|gb|EGB19495.1| 3-isopropylmalate dehydratase [Clostridium symbiosum WAL-14673]
Length = 421
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 222/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ G + ++D+++ +D+ P + +K +N V++ EK
Sbjct: 2 GMTMTQKILAAHAGLSEVKAGQLIEADLDLVLGNDITTPVAINEMQKM--DNQTVFNNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ +N R+F +I ++D+ ++G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAQNCKCCREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFELTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + L+M++R T+CNM +EAGGKNG+ P
Sbjct: 170 SRWVSGKDVILHIIGMIGVDGALYKSMEFCGDGIRNLTMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + Y+ +D A + + Y D+S+L+P +A PH P+N E +
Sbjct: 230 VDELTEEYMKEHSKRDYKIYEADADAEYDAVYTIDLSELKPTIAFPHLPENTRTIEEAGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V+ID+ IGSCT G+ +D AA + G+KV V ++PATQ +++
Sbjct: 290 VRIDQSVIGSCTNGRIDDMRIAAGIL--KGRKVAKGVRCIVIPATQAIYLQCIR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 --EGLMEIFVEAGA-VVSTPTCGPCLGG 366
>gi|268324974|emb|CBH38562.1| isopropylmalate/citramalate isomerase large subunit [uncultured
archaeon]
Length = 411
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 218/394 (55%), Gaps = 36/394 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + G+ V VD +M +D+ G +F + E A +EK V
Sbjct: 3 TIAEKILDGEA-------GEIVEREVDYIMVNDITGVPAFEVLD----ELAYDIKKEKAV 51
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DHY+ D + LR++ + I +Y+I G+CH + + G
Sbjct: 52 VIQDHYVPNKDVDSAEQAKALRNYARKYKIANYYEIGK----------GGICHQVMIEAG 101
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG +++G DSHTC+ GA G F+TG+G+T+A + TG++ KVP T +FVL GE
Sbjct: 102 YVAPGRLIIGADSHTCSYGALGAFSTGVGSTEAAAAMATGRLWFKVPETQKFVLSGEPKR 161
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y++ KD+IL IIG+I V+G+ YKS EF GT +E L++ +R+T+ NM +EAG K G++P D
Sbjct: 162 YVMGKDIILHIIGDIGVSGSLYKSQEFYGTAIESLNLSDRITISNMAIEAGAKAGIIPPD 221
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKAS-FLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
F++L+ + Y+ VY+D K S + + +D S++ P VAKP SP N A A E DV
Sbjct: 222 EKVFEFLDGRVRSDYKAVYADGKESEYEAVLEYDASEIVPTVAKPFSPANTAPASEL-DV 280
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ Y+GSCT G+ ED AA + SGKK+ V +VPA++ V
Sbjct: 281 PIDQAYLGSCTNGRIEDLRVAAAIL--SGKKISPDVRMIVVPASEAVLEQAIE------- 331
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ QIF A + P+CGACLGG A+
Sbjct: 332 -EGVIQIFLAADAFV-SGPTCGACLGGHMGVLAK 363
>gi|345016463|ref|YP_004818816.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344031806|gb|AEM77532.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 418
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 227/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ PG+ + V+VD+++ +DV P + F+K E +V+D+ K
Sbjct: 2 GLTLTQKILS-AKVGREVKPGELIEVDVDMVLGNDVTAPVAIKEFEKIGKE--EVFDKTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F + I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIMRKFAKKHGIVNFFEVGQMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 169 QKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSMDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ DE A + Y ++ ++ P VA PH P+N E
Sbjct: 228 FDEITEAYVKGRAKREYKVFERDEDAEYSEVYEINLDEIRPQVAFPHLPENTRNIDEIGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRMSDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +A+
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGILAKGERALAT 378
>gi|373125422|ref|ZP_09539256.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 21_3]
gi|371657623|gb|EHO22921.1| 3-isopropylmalate dehydratase large subunit [Erysipelotrichaceae
bacterium 21_3]
Length = 421
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 220/386 (56%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + VN+D+++ +D+ P + F+K +G ++V+D KI
Sbjct: 3 MTMTQKILAAHAGLDHVEAGQLIEVNLDMVLGNDITSPVAIKEFEK-YG-FSQVFDPGKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NI++FYD+ ++G + H L ++
Sbjct: 61 SMVMDHFAPNKDIKAAQQCKACRTFAYAKNIEHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ LSM++R+ + NM +EAG KNG+
Sbjct: 171 PHVSGKDVILHIIGMIGVDGALYKSMEFSGIGLQSLSMDDRLCMANMAIEAGAKNGIFAF 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++D+ S PY +D A + + Y D+S++ VA H P+N E K+
Sbjct: 231 DEITEAYVKDRVSRPYVTYEADADAEYCNVYHLDLSQITHTVAFTHLPENTRTMDEIKEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+ID+V IGSCT G+ D AA++ V ++PATQ+++ L
Sbjct: 291 VRIDQVVIGSCTNGRLSDMAEAAQILKGQHVAKGVRAIIIPATQEIYKQCIQLGY----- 345
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
++IF +AGC ++P+CG CLGG
Sbjct: 346 ---TEIFIDAGC-VVSTPTCGPCLGG 367
>gi|118474772|ref|YP_891400.1| 3-isopropylmalate dehydratase large subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|424820108|ref|ZP_18245146.1| 3-isopropylmalate dehydratase large subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|166989619|sp|A0RMG7.1|LEUC_CAMFF RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|118413998|gb|ABK82418.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|342326887|gb|EGU23371.1| 3-isopropylmalate dehydratase large subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 421
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 225/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + + G V +D+++ +D+ P S FK+ + K+ + +
Sbjct: 4 TITEKIFSEHVQHA-VYAGQIVETKIDMVIGNDITTPISIRAFKESGAK--KLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I RDF E ++K F+D KD+G + H + ++G
Sbjct: 61 IVMDHYIPAKDIASANQAKISRDFAYEHDLKNFFDEKDMG----------IEHALMPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP T++ G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPATIKVEFVGKPAK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I +I V GA YK++EF G ++ L M+ R +LCNM +EAGGK+G++ D
Sbjct: 171 HIYGKDLILEVIRQIGVDGALYKALEFCGDAMKYLDMDSRFSLCNMAIEAGGKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T ++LE K +L +P YSDE A++ R D+SKL+P++A P P N E
Sbjct: 231 DITKEFLESK-NLRSKPKFHYSDEGANYEQVLRIDVSKLDPVIAYPFLPSNGKSINEALK 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+KID+V+IGSCT G+ D AA++ GK+V T L+ PATQK+ +
Sbjct: 290 DDLKIDQVFIGSCTNGRLSDLRIAARIL--KGKRVAKHTRLIITPATQKIAL-------- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAQKEGLMDIFVEAGA-VVSNPTCGACLGG 368
>gi|163816820|ref|ZP_02208183.1| hypothetical protein COPEUT_03010 [Coprococcus eutactus ATCC 27759]
gi|158448077|gb|EDP25072.1| 3-isopropylmalate dehydratase, large subunit [Coprococcus eutactus
ATCC 27759]
Length = 461
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 225/403 (55%), Gaps = 30/403 (7%)
Query: 53 QQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIF 112
+ ++RR ++ MT+T+KI + + P + G + ++D+++ +DV P I
Sbjct: 32 ETNDRR-----TIHMGMTMTQKILAAHAGLPAVEAGQLIEADLDLVLGNDVTTP--VAIH 84
Query: 113 KKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFK 172
+ E +V+D++KI ++ DH+ D ++ + +R F I+ ++D+ +G
Sbjct: 85 EMEKFNKKEVFDKKKIALVMDHFTPNKDIKSAEHCKCVRQFSAANEIENYFDVGAMG--- 141
Query: 173 ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVL 232
+ H L ++G GE +G DSHTCT GA G F+TG+G+TD + TG+
Sbjct: 142 -------IEHALLPEKGLIVAGETCIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGEAW 194
Query: 233 LKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTL 292
KVP ++F + GE ++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+
Sbjct: 195 FKVPSAIKFNIVGEKAKWISGKDVILHIIGMIGVDGALYKSMEFVGEGIKNLTMDDRFTI 254
Query: 293 CNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAK 352
NM +EAG KNG+ P D T +Y+++ ++ Y +DE A + +EY D+S+L+P VA
Sbjct: 255 ANMAIEAGAKNGIFPVDELTEEYMKEHSTKSYTKYEADEDAVYDAEYTIDLSQLKPTVAF 314
Query: 353 PHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPAT 410
PH P+N E D+KID+V IGSCT G+ D AA + G+KV V ++P T
Sbjct: 315 PHLPENTKTIDEVGDIKIDQVVIGSCTNGRISDMRIAADII--KGRKVADGVRVIVIPGT 372
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
Q +++ + IF +AG ++P+CG CLGG
Sbjct: 373 QDIYLQCIE--------EGLMTIFVKAGA-VVSTPTCGPCLGG 406
>gi|160942996|ref|ZP_02090234.1| hypothetical protein FAEPRAM212_00473 [Faecalibacterium prausnitzii
M21/2]
gi|158445690|gb|EDP22693.1| 3-isopropylmalate dehydratase, large subunit [Faecalibacterium
prausnitzii M21/2]
Length = 419
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 215/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTLT+KI + + P++ G + +DI++ +D+ P + F++ + +V+D+E
Sbjct: 2 GMTLTQKILAAHAGLPEVKAGQLINAKLDIVLGNDITTPVAINEFERAGFD--RVFDKEH 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH++ D ++ R+F + +I FYD+ +G + H L +
Sbjct: 60 IAIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG KVP ++FVL G+
Sbjct: 110 KGIVTAGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGMAWFKVPSAIKFVLTGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KDLIL IIG I V GA YKSMEF G V L+M++R+ +CNM +EAG KNG+ P
Sbjct: 170 NPRVSGKDLILHIIGMIGVDGALYKSMEFTGPGVAGLTMDDRLCICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL ++ P PV+ +D A + D+S LEP V+ PH P+N +A E
Sbjct: 230 VDEVTKAYLAGRSQRP--PVFYEADPDAVYEKTIEIDLSALEPTVSYPHLPENTHVASEG 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD+KID+V IGSCT G+ ED AA + V ++PAT V+ +
Sbjct: 288 KDIKIDQVVIGSCTNGRLEDMEAAYNILKGKHIAKGVRGIIIPATMAVYKECIL------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AGC ++P+CG CLGG
Sbjct: 342 --RGWTTAFIDAGC-IVSTPTCGPCLGG 366
>gi|331083906|ref|ZP_08333015.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330403331|gb|EGG82891.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 420
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 215/386 (55%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + +D+++ +D+ P + +K E V+ ++KI
Sbjct: 1 MTMTQKILAAHAGLEKVEAGQLIEAELDLVLGNDITSPVAIHEMEKMKAEG--VFHKDKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+I D ++ N +R+F I ++D+ ++G + H L +
Sbjct: 59 ALVMDHFIPNKDIKSAENCKCVREFAARHEITNYFDVGEMG----------IEHALLPES 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP +R L G+
Sbjct: 109 GLTVAGDAIIGADSHTCTYGALGAFSTGVGSTDMAAAMVTGKAWFKVPSAIRINLIGKPS 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL +IG+I V GA YKS+EF G V+ LSM++R T+ NM +EAG KNG+ P
Sbjct: 169 KWVSGKDVILHLIGKIGVDGALYKSLEFTGEGVKNLSMDDRFTIANMAIEAGAKNGIFPV 228
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-D 367
D T +Y+++ + PY+ DE A + EY D+SKL P VA PH P N E + D
Sbjct: 229 DEKTEQYMKEHSKRPYKRYEPDEDAVYDEEYTIDLSKLRPTVAFPHLPSNTKTIDEIQDD 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V +D+ IGSCT G+ +D AA++ K V ++PATQK+++ V
Sbjct: 289 VIVDQAVIGSCTNGRIDDLRCAAQILKNHKVKKGVRCIIIPATQKIYLQALEEGV----- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+IF EAG ++P+CG CLGG
Sbjct: 344 ---LKIFIEAGA-VVSTPTCGPCLGG 365
>gi|355630433|ref|ZP_09050845.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
7_3_54FAA]
gi|354818651|gb|EHF03119.1| 3-isopropylmalate dehydratase large subunit [Clostridium sp.
7_3_54FAA]
Length = 421
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 222/388 (57%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ G + ++D+++ +D+ P + +K +N V++ EK
Sbjct: 2 GMTMTQKILAAHAGLSEVKAGQLIEADLDLVLGNDITTPVAINEMQKM--DNQTVFNNEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ +N R+F +I ++D+ ++G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAQNCKCCREFACRHDITNYFDVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK K+P ++F L G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKIPSAIKFELTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + L+M++R T+CNM +EAGGKNG+ P
Sbjct: 170 SRWVSGKDVILHIIGMIGVDGALYKSMEFCGDGIRNLTMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y+++ + Y+ +D A + + Y D+S+L+P +A PH P+N E +
Sbjct: 230 VDELTEEYMKEHSKRDYKIYEADADAEYDAVYTIDLSELKPTIAFPHLPENTRTIEEAGE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V+ID+ IGSCT G+ +D AA + G+KV V ++PATQ +++
Sbjct: 290 VRIDQSVIGSCTNGRIDDMRIAAGIL--KGRKVAKGVRCIVIPATQAIYLQCIR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 342 --EGLMEIFVEAGA-VVSTPTCGPCLGG 366
>gi|429737131|ref|ZP_19271003.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429153275|gb|EKX96062.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 420
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 217/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR
Sbjct: 2 GMNMSEKILARHAGLEHVEPGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRT 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L
Sbjct: 58 KIALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAGGKNG+
Sbjct: 168 KPADISGKDVILTLIGMIGVDGALYQSLEFTGEGVAELTMTDRLTIANMAIEAGGKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D +Y+E + + P+EPV++D A + ++S+L P+V+ PH P+N +
Sbjct: 228 PYDDVCREYVEGRMTTPFEPVHADPDAQYARTVEINLSELRPVVSFPHLPENTKRVMDIP 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ + ID+V IGSCT G+ ED AA++ +V ++P + V+ + S
Sbjct: 288 EPIAIDQVVIGSCTNGRLEDMEIAAEILKGHTVHERVRCIIIPGSPWVYQE--------S 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 340 MKRGYLDIFMEAGAAI-STPTCGPCLGG 366
>gi|293402208|ref|ZP_06646346.1| 3-isopropylmalate dehydratase, large subunit [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304315|gb|EFE45566.1| 3-isopropylmalate dehydratase, large subunit [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 420
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 218/386 (56%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + V++D+++ +D+ P + F+K E +V+D ++
Sbjct: 3 MTMTQKILAEHAHVAEVKAGQLIEVDLDMVLGNDITSPVAIKEFEKYGFE--QVFDPGRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NIK+FYD+ ++G + H L ++
Sbjct: 61 TMVMDHFAPNKDIKAAQQCKACRTFAYAKNIKHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G + L+M++R+ + NM +EAG KNG+
Sbjct: 171 PNVSGKDVILHIIGMIGVDGALYKSMEFSGVGLRNLTMDDRLAMANMAIEAGAKNGIFAY 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++++ PY+ +D A + + Y D+S ++P +A PH P+N + K+
Sbjct: 231 DEITEAYVKERVHRPYKTYEADSDADYANVYHIDLSAIKPTIAFPHLPENTKTMEDIKEN 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ D AAK+ V T ++PATQ ++ +
Sbjct: 291 IVIDQVVIGSCTNGRLSDMETAAKILKGKHVAKGVRTIIIPATQAIYKECMK-------- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AGC ++P+CG CLGG
Sbjct: 343 RGYMEIFIDAGC-VVSTPTCGPCLGG 367
>gi|401563815|ref|ZP_10804750.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
FOBRC6]
gi|400189435|gb|EJO23529.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
FOBRC6]
Length = 420
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 217/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR
Sbjct: 2 GMNMSEKILARHAGLDHVEPGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRT 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L
Sbjct: 58 KIALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA Y+S+EF G V LSM +R+T+ NM +EAGGKNG+
Sbjct: 168 KPADISGKDVILTLIGIIGVDGALYQSLEFTGEGVADLSMTDRLTIANMAIEAGGKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D +Y+E + + P+EPV++D A + ++S+L P+V+ PH P+N +
Sbjct: 228 PYDDVCREYVEGRMTTPFEPVHADPDAQYARTVEINLSELRPVVSFPHLPENTKRVMDIA 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ + ID+V IGSCT G+ ED AA++ +V ++P + V+ + S
Sbjct: 288 EPIAIDQVVIGSCTNGRLEDMEIAAQILKGHTVHERVRCIIIPGSPWVYQE--------S 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 340 MKRGYLDIFMEAGAAI-STPTCGPCLGG 366
>gi|379011257|ref|YP_005269069.1| 3-isopropylmalate dehydratase large subunit LeuC2 [Acetobacterium
woodii DSM 1030]
gi|375302046|gb|AFA48180.1| 3-isopropylmalate dehydratase large subunit LeuC2 [Acetobacterium
woodii DSM 1030]
Length = 422
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 220/387 (56%), Gaps = 28/387 (7%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREKIV 129
+T+KI + + ++ GD + N+D+++ +D+ P + +F+ G AK V+D++K+
Sbjct: 1 MTQKILAAHAGLSEVKSGDLIMANLDLVLGNDITAPVAIDVFE---GIQAKTVFDKDKVA 57
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDH+ D +A LR F + +I ++++ +G + H L ++G
Sbjct: 58 LVPDHFAPNKDIKAAEQSKKLRRFAAQHDITNYFEVGKMG----------IEHALLPEKG 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G++++G DSHTCT GA G F+TG+G+TD + TGK KVP +RF++ G++
Sbjct: 108 LVIAGDLVIGADSHTCTYGALGAFSTGVGSTDMAVGMATGKAWFKVPAAMRFIITGKLNK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KD+IL IIG I V GA YKSMEF+G + L++++R T+ NM +EAG KNG+ D
Sbjct: 168 YVSGKDVILHIIGLIGVDGALYKSMEFMGEGIANLTIDDRFTIANMAIEAGAKNGIFIVD 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD-V 368
T YL+ + + D+ A + Y D++ ++P VA P P+N E + V
Sbjct: 228 DQTIDYLKSHSKKRFTVYEMDDDAEYEQTYEIDLATIKPTVAFPSLPENTKTTAEITEPV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V IGSCT G+ DF AAK+F G++V V ++PATQK+++ L
Sbjct: 288 VIDQVVIGSCTNGRLSDFAKAAKIF--DGRQVAKGVRVVIIPATQKIYLQCMELGY---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG T ++P+CG CLGG
Sbjct: 342 ----FKTFIEAGA-TISTPTCGPCLGG 363
>gi|336426727|ref|ZP_08606736.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336010743|gb|EGN40725.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 420
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 220/390 (56%), Gaps = 28/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ G + ++D+++ +D+ P I + E + V+D++K
Sbjct: 2 GMTMTQKILAAHAGLEKVEAGQLIEADLDLVLGNDITSP--VAIKEMEKMKVDGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ + +R+F I ++++ ++G + H L +
Sbjct: 60 IALVPDHFVPNKDIKSAEHCKCVREFAYRNQITNYFEVGEMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + TGK KVP +RF L G++
Sbjct: 110 KGLVVAGDVVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGKAWFKVPGAIRFNLTGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEFVG V L+M++R T+ NM +EAGGKNG+ P
Sbjct: 170 SPWVSGKDVILHIIGKIGVDGALYKSMEFVGEGVSGLTMDDRFTIANMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLED---KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D Y+++ KT + YE +DE A + EY D+ L P +A PH P+N E
Sbjct: 230 VDDQALLYMKEHSMKTPVIYE---ADEDAVYEEEYTIDLGALRPTIAFPHLPENAKTIDE 286
Query: 365 CK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
K DVKID+V IGSCT G+ D AA+V + ++PATQ +++
Sbjct: 287 IKEDVKIDQVVIGSCTNGRIGDLRCAAEVLKGRHVAQGIRCIIIPATQAIYLQAME---- 342
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF E G ++P+CG CLGG
Sbjct: 343 ----EGLLKIFIEVGA-IVSTPTCGPCLGG 367
>gi|433653758|ref|YP_007297466.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433291947|gb|AGB17769.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 418
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 229/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S + ++ PGD + ++VD+++ +DV P + F K +N V+D+EK
Sbjct: 2 GLTLTQKILSDKAGY-EVKPGDLIEIDVDMVLGNDVTSPVAIKEFLKIGVKN--VFDKEK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F E I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIVRKFAREYGIVNFFEVGMMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TGIG+TD + TGK KVP +RF L G++
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGAITCFSTGIGSTDMACAMATGKAWFKVPEAIRFNLKGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + LS+++R T+ NM +EAG KNG+
Sbjct: 169 NKWVSGKDVILYIIGMIGVDGALYKSMEFTG-DISSLSIDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + + Y+ +DE A ++ Y D+SK++P VA PH P+N E +
Sbjct: 228 YDEITEAYVKGRANRKYKVFKADEDADYVESYDIDLSKIKPQVAFPHLPENTKPIDEVGN 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ D +V GKKV V + PATQ ++++
Sbjct: 288 IKIDQVVIGSCTNGRISDMEVTYEVL--KGKKVHPDVRLIIFPATQDIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +++
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGILAKGERAIST 378
>gi|227872471|ref|ZP_03990811.1| 3-isopropylmalate dehydratase [Oribacterium sinus F0268]
gi|227841672|gb|EEJ51962.1| 3-isopropylmalate dehydratase [Oribacterium sinus F0268]
Length = 421
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 218/387 (56%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI ++ + ++ G + VD++ +D+ P + K GE V+D+EK+
Sbjct: 3 MTMSQKILAKHAGLEEVQAGQLILAKVDLVHGNDITTPVAIRELDKIHGEG--VFDKEKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V + DH++ D + + I R+F E +K++YD+ ++G + H + ++
Sbjct: 61 VFVMDHFVPNKDITSAKCTQICRNFAKEHGLKHYYDVGNMG----------IEHALIPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE+ +G DSHTCT GA G F+TG+G+TD + TG++ KVP ++ VL G++
Sbjct: 111 GLITAGELSIGADSHTCTYGALGAFSTGVGSTDMAAAMATGELWFKVPTAIKVVLKGKLQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL +IG I V GA Y+S+EF G V LSM++R +CNM +EAGGKNG+ P
Sbjct: 171 KHVSGKDLILHLIGMIGVDGALYESIEFTGEGVASLSMDDRFAICNMAIEAGGKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y++ ++ Y +DE A + D+S L+ VA PH P+N + +
Sbjct: 231 DEKTLEYIKAHSNKEYHIYEADEDAEYDRVIEIDLSSLKSTVAFPHLPENTHEIGSFEKI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+ IGSCT G+ D AA++ A G+K+ V ++PATQK++++
Sbjct: 291 SIDQAVIGSCTNGRLSDIKVAAEI--ARGRKIAENVRCIVIPATQKIYLEAME------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
K + EAG ++P+CG CLGG
Sbjct: 342 -KGYIKDLIEAGA-VVSTPTCGPCLGG 366
>gi|328954190|ref|YP_004371524.1| 3-isopropylmalate dehydratase large subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328454514|gb|AEB10343.1| 3-isopropylmalate dehydratase large subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 421
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 215/389 (55%), Gaps = 29/389 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDRE 126
MT+TEKI + + + PG + VDI + +D+ P I KEF + KV+D E
Sbjct: 5 MTITEKILAAHAGLDYVEPGQLINARVDIALGNDITAP----IAIKEFRQAGALKVYDPE 60
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++V++ DH+ D + LR F EQ ++++YD ++G V H L
Sbjct: 61 RVVLVADHFAPNKDIPSAIQCQTLRRFAQEQKLRHYYDGGEMG----------VEHALLP 110
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG++++G DSHTCT G G FATG+G+TD + TG+ KVP T+ F+ G+
Sbjct: 111 EKGIVGPGDLVIGADSHTCTYGGLGAFATGVGSTDLAATMITGESWFKVPETMLFIFTGQ 170
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P ++ KDLIL +IG+I V GA Y +MEF G V RL M +R+T+CNM +EAG KNG++
Sbjct: 171 LPQWVGGKDLILFLIGQIGVDGALYNAMEFTGEVVARLPMSDRLTMCNMAIEAGAKNGII 230
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y+ ++ SD A++ S +D+S +EP +A PH P+N +
Sbjct: 231 APDDITREYVANRALRAVTFFASDPGANYHSVREYDVSGMEPQIAFPHLPENTHPLSQVG 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
V ID+ IGSCT G+ ED AA+V G+KV V ++PAT ++
Sbjct: 291 AVPIDQAVIGSCTNGRLEDMRLAAQVL--KGRKVARGVRLIIIPATPWIYRQCLK----- 343
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG + P+CG CLGG
Sbjct: 344 ---EGLFEIFLDAGA-VISPPTCGPCLGG 368
>gi|260887162|ref|ZP_05898425.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sputigena
ATCC 35185]
gi|330839068|ref|YP_004413648.1| homoaconitate hydratase family protein [Selenomonas sputigena ATCC
35185]
gi|402834193|ref|ZP_10882797.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. CM52]
gi|260863224|gb|EEX77724.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sputigena
ATCC 35185]
gi|329746832|gb|AEC00189.1| homoaconitate hydratase family protein [Selenomonas sputigena ATCC
35185]
gi|402278772|gb|EJU27827.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. CM52]
Length = 420
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 209/388 (53%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M +TEKI +R + + PG + +D+++ +D+ P S KEF + V+D E
Sbjct: 2 GMNMTEKILARHAGLSHVEPGQLITCQLDMVLANDITAPPSI----KEFERIGRPVFDNE 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++PDH+ D +A I+RDF + IK +++I +G + H+ L
Sbjct: 58 KIALVPDHFQPAKDIKAAGLGKIVRDFAKKHKIKNYFEIGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP T+ L GE
Sbjct: 108 EFGLVGPGMLTIGADSHTCTYGALNGFSTGVGTTDLAVGMATGRAWFKVPETIEVHLTGE 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA YKS+EF G V L+M +R+T+ NM +EAG KNG+
Sbjct: 168 KPADVNGKDVILTLIGMIGVDGALYKSLEFTGEGVAALTMTDRLTIANMAIEAGAKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T +Y+E + YEPV SD A + D+S L P+VA PH P N +
Sbjct: 228 PFDEKTKEYVEGRVKGAYEPVTSDADAKYCRTVEIDLSSLRPVVAFPHLPGNTKRVMDIA 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ +KID+V IGSCT G+ ED +A + V ++P +Q V+ + L
Sbjct: 288 EPIKIDQVVIGSCTNGRLEDLEISAGLLKGHEVHPDVRCIVIPGSQAVYQEAMHL----- 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+F +AGC A+P+CG CLGG
Sbjct: 343 ---GYIDVFIDAGCAV-AAPTCGPCLGG 366
>gi|405984416|ref|ZP_11042719.1| 3-isopropylmalate dehydratase, large subunit [Slackia piriformis
YIT 12062]
gi|404388248|gb|EJZ83332.1| 3-isopropylmalate dehydratase, large subunit [Slackia piriformis
YIT 12062]
Length = 419
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 216/399 (54%), Gaps = 21/399 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + ++D+ + +D+ GP S I + E +V+DREK+
Sbjct: 3 MTMTQKILAAHAGLESVEAGQLIEADIDLALANDITGPVS--IRELEKAGMDQVFDREKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D ++ + R+F + NI +F+D+ +G + H L ++
Sbjct: 61 ALVLDHFAPNKDIKSAEQCKVCREFAKKHNIVHFFDVGSMG----------IEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TGK +VP +R L GE+
Sbjct: 111 GIVAAGDLVIGADSHTCTYGALGAFSTGVGSTDCAAGIATGKAWFRVPSAIRIELTGELQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA Y+SMEF G V+ LSM++R ++CNM +EAG KNG+ P
Sbjct: 171 PWVCGKDVILHIIGTIGVDGALYQSMEFCGDGVKSLSMDDRFSICNMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y++D+ +D+ AS+ R ++ + P VA PH P+N E +
Sbjct: 231 DEKTRLYMKDRVRHAPREFAADDDASYERTIRINLRDVPPTVAAPHLPENTKPVTELAGI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
I + IGSCT G+ ED AA + V ++PATQ+V++ +
Sbjct: 291 PIQQSVIGSCTNGRIEDMRMAASIMRGRHVADGVRAIVIPATQEVYLQCIR--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+++F EAG ++P+CG CLGG A +A+
Sbjct: 343 GLTEVFIEAGA-VVSTPTCGPCLGGHMGVLAAGERAVAT 380
>gi|292669910|ref|ZP_06603336.1| 3-isopropylmalate dehydratase [Selenomonas noxia ATCC 43541]
gi|292648707|gb|EFF66679.1| 3-isopropylmalate dehydratase [Selenomonas noxia ATCC 43541]
Length = 420
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 217/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR
Sbjct: 2 GMNMSEKILARHAGLDHIEPGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRT 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L
Sbjct: 58 KIALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVRLTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAGGKNG+
Sbjct: 168 KPADISGKDVILTLIGMIGVDGALYQSLEFTGEGVADLTMTDRLTIANMAIEAGGKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D Y+E++ P+EPV++D A + ++S+L P+V+ PH P+N +
Sbjct: 228 PYDDVCRAYVEERMKAPFEPVHADPDAHYARTVEINLSELRPVVSFPHLPENTKRVMDIA 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ ++ID+V IGSCT G+ ED AA++ +V ++P + V+ + S
Sbjct: 288 EPIEIDQVVIGSCTNGRLEDMEIAAEILKGHTVHERVRCIVIPGSPWVYQE--------S 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 340 MRRGYLDIFMEAGAAI-STPTCGPCLGG 366
>gi|354559402|ref|ZP_08978651.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353542298|gb|EHC11761.1| 3-isopropylmalate dehydratase large subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 419
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 216/400 (54%), Gaps = 22/400 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + ++ PG + +D+ + +D+ GP + F K E KVWD K+
Sbjct: 1 MTITEKILADHAGLTEVVPGQLITGKLDLALANDITGPVAIQEFAKF--ETDKVWDPAKV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D + LR F Q I ++++ +G + H L ++
Sbjct: 59 ALVPDHFTPNKDIASAELSKSLRVFAKNQKIVHYWEQGRVG----------IEHCLLPEQ 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE-M 247
G PG+V++G DSHTCT GA G FATG+G+TD L TG+ +VP +++F+ G+
Sbjct: 109 GVTLPGDVIIGADSHTCTYGALGAFATGVGSTDLAAGLATGEAWFRVPESIKFIFKGQNF 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDLIL IG+I V GA YK+MEF G + LSM+ R T+CNM +EAG KNG++
Sbjct: 169 QPWVGGKDLILYTIGKIGVDGARYKAMEFSGEGIAALSMDNRFTICNMAIEAGAKNGIIV 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y++++ P++ SD A + + F+++ + VA PH P+N E +
Sbjct: 229 ADEKTLAYVKERAQRPFKVYESDPDAQYSEVFEFNVADIPLQVAFPHLPENSKAVEEARG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+V IGSCT G+ ED AA++ V ++P TQ ++
Sbjct: 289 IKIDQVVIGSCTNGRLEDLRIAAEILRGKSVHPDVRLIVIPGTQNIYKQAMK-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ IF +AG ++P+CG CLGG A+ +++
Sbjct: 341 EGLIDIFIDAGA-VVSTPTCGPCLGGYMGILAKGERALST 379
>gi|289577280|ref|YP_003475907.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
italicus Ab9]
gi|289526993|gb|ADD01345.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
italicus Ab9]
Length = 418
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 226/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ G+ + V+VD+++ +DV P + F+K E +V+D+ K
Sbjct: 2 GLTLTQKILS-AKIGREVKAGELIEVDVDMVLGNDVTAPVAIREFEKIGKE--EVFDKTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F + I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIMRKFAKKHGIVNFFEVGQMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 169 QKWVSGKDIILYIIGKIGVDGALYKSMEFTG-NIKTLSMDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ DE A + Y ++ ++ P VA PH P+N E
Sbjct: 228 FDEITEAYVKGRAKREYKVFERDEDAEYSEVYEINLDEIRPQVAFPHLPENTRSIDEVGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRLSDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG AR +A+
Sbjct: 340 --RGYIEEFIKAGA-AISTPTCGPCLGGHMGILARGERALAT 378
>gi|397779480|ref|YP_006543953.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Methanoculleus bourgensis MS2]
gi|396937982|emb|CCJ35237.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Methanoculleus bourgensis MS2]
Length = 417
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 215/387 (55%), Gaps = 25/387 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+ EKIFS+ + + GD V VD M HD+ GP + +F++ GE +V+D E+
Sbjct: 2 AATIAEKIFSQTCGR-AVRAGDVVMAPVDAAMIHDITGPLAVRVFREMGGE--QVFDPER 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+++ DH + A N +R F EQ I + YD+ ++GVCH + +
Sbjct: 59 IIMLFDHQVPADSIPAAENHVFMRRFAEEQGI-HNYDL-----------HEGVCHQVVME 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++GTDSHTCT GA G FATGIG+TD GFVL G + +VP ++R +DG
Sbjct: 107 KGRAAPGEIIVGTDSHTCTYGAAGAFATGIGSTDMGFVLKFGALYFRVPESIRIEVDGTF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKDLIL + G+I GATYK++EF G + ++M RMT NM +E G K G+VP
Sbjct: 167 GRRVGAKDLILSLAGDIGADGATYKALEFTGGAIRAMNMAGRMTCANMAIEMGAKAGIVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D TT++Y+ + + + SD A + R+D++ L P VA PH+ DN
Sbjct: 227 PDATTWEYVAARREVEPFDLASDPGAKYAETRRYDVTDLAPQVAVPHNVDNVVDVGRVAG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVF-LASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IGSCT G+ ED + AA+V A V ++PA++ ++ +
Sbjct: 287 TKVDQVFIGSCTNGRYEDLVEAAEVLGTADAFADGVRVIVIPASRTEYLKALRAGL---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 343 ----IERFVEAGALVEA-PCCGPCMGG 364
>gi|402313732|ref|ZP_10832642.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium ICM7]
gi|400365514|gb|EJP18565.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium ICM7]
Length = 418
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 215/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P + KK EN KV++ EK
Sbjct: 2 GMTMTQKILAAHAGLDFVEAGQLIEADLDLVLGNDITSPVAINEIKKF--ENKKVFNGEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ +N RDF E I F+D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAQNCKTCRDFADENEIVNFFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G++
Sbjct: 110 QGLTVAGDCIIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFNLKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA YKSMEF G V LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 SKDVCGKDVILHIIGKIGVDGALYKSMEFAGEGVASLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +DE A + D+S L P VA PH P+N + E D
Sbjct: 230 VDDITLDYIKEHSNRSPKIFEADEDAIYDEVIDIDLSALRPTVAFPHLPENTKVIGEFGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQ+++
Sbjct: 290 IKIDQAVIGSCTNGHISDLRSAAAQM--KGKKVAKNVRCIVIPATQEIYKQAIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLVDIFIDAGA-IVSTPTCGPCLGG 366
>gi|154174191|ref|YP_001409010.1| 3-isopropylmalate dehydratase large subunit [Campylobacter curvus
525.92]
gi|166989618|sp|A7H0L8.1|LEUC_CAMC5 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|112804104|gb|EAU01448.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter curvus
525.92]
Length = 421
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 225/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + ++ + + +D+++ +D+ P S F++ K+ + E
Sbjct: 4 TITEKIFSDHVGR-EVFANEIIESGIDMVIGNDITTPISIKQFERSGA--TKLANPEGFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I RDF + ++KYF+D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDILSANQAKISRDFAYKHDLKYFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVPPT++ V G++
Sbjct: 111 LIVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPPTIKVVFRGKLGR 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G T++ L M+ R ++CNM +EAGGK+G++ D
Sbjct: 171 HVYGKDLILEIIRQIGVDGARYKALEFCGETIDALDMDGRFSMCNMAIEAGGKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
TT ++L+ K +L EP YSDE A + KL+P++A P P N RE
Sbjct: 231 ETTREFLKGK-NLRAEPKFFYSDEGAGYERVLEIYADKLDPVIAYPFLPSNGKSVREAVK 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ +
Sbjct: 290 DDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVSRKTRLIITPATQKIAL-------- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAQKEGLMDIFVEAGA-VVSNPTCGACLGG 368
>gi|268610787|ref|ZP_06144514.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus
flavefaciens FD-1]
gi|268611701|ref|ZP_06145428.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus
flavefaciens FD-1]
Length = 422
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 214/390 (54%), Gaps = 29/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK--VWDR 125
MT+T+KI + + ++ G + ++D+++ +D+ P + KEF + K V+D+
Sbjct: 2 GMTMTQKILAAHAGLEKVQAGQLILADLDLVLGNDITSP----VAIKEFAKLGKDSVFDK 57
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
K+ ++ DH+ D +A + RDFC E+ I +FYD+ +G + H L
Sbjct: 58 NKVTMVMDHFAPNKDIKAAEQCKMCRDFCGEKEITHFYDVGKMG----------IEHALL 107
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G G V++G DSHTCT GA G F+TG+G+TD + GK KVP ++F L G
Sbjct: 108 PEKGLVTAGNVVIGADSHTCTYGALGAFSTGVGSTDMACGMAIGKAWFKVPSAVKFELKG 167
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ Y+ KD+IL IIG+I V GA Y+SMEF G + L+M +R+ + NM +EAG KNG+
Sbjct: 168 CLRQYVSGKDVILHIIGKIGVDGALYRSMEFTGEGLASLNMADRLCIANMAIEAGAKNGI 227
Query: 306 VPADGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T Y+ + EPV +D+ A + D+ +EP VA PH P+N
Sbjct: 228 FEVDDITLDYIREHGG--AEPVIFKADDDAVYDEVITIDLDNIEPTVAFPHLPENAKTFD 285
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
E D+KID+V IGSCT G+ ED +AAA + V ++PATQ++++D + +
Sbjct: 286 EIGDIKIDQVVIGSCTNGRLEDLVAAADIMRGHKCAENVRVIIIPATQQIYLDAMEMGLL 345
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F E G ++P+CG CLGG
Sbjct: 346 --------RTFIECGA-VVSTPTCGPCLGG 366
>gi|317131903|ref|YP_004091217.1| 3-isopropylmalate dehydratase large subunit [Ethanoligenens
harbinense YUAN-3]
gi|315469882|gb|ADU26486.1| 3-isopropylmalate dehydratase, large subunit [Ethanoligenens
harbinense YUAN-3]
Length = 418
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 212/385 (55%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G V VD+++ +D+ P + F E V+D+ KI
Sbjct: 3 MTMTQKIIAAHAGLDKVEAGQLVMAKVDLVLGNDITAPVAVKNF--EAAGFDSVFDKTKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A +R+F + I F+D +G V H L ++
Sbjct: 61 ALVMDHFTPNKDIKAAEQCKQVREFAKKYGIVNFFDTGCVG----------VEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + GK+ KVP +RF+L G+
Sbjct: 111 GLVTTGDLVVGADSHTCTYGALGAFSTGVGSTDIAAAMKMGKLWFKVPSAIRFILKGKPS 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ L+ME+R+ + NM +EAGGKNG+
Sbjct: 171 KWVGGKDVILHIIGLIGVDGALYKSMEFTGEGLKNLTMEDRLCMANMAIEAGGKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y ++ + P +DE A + D+S+++P VA PH P+N + D+
Sbjct: 231 DDLTLEYAKEHAAKPVTVYKADEDAEYERTIEIDLSEVKPTVAFPHLPENAHTIDDVGDI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V IGSCT G+ ED AA + V ++PATQK+W+ +
Sbjct: 291 KIDQVVIGSCTNGRIEDLRIAADILKGKTVHPDVRCIIIPATQKIWLQAVE--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
++IF EA C ++P+CG CLGG
Sbjct: 343 GLAKIFVEANC-AFSTPTCGPCLGG 366
>gi|355572654|ref|ZP_09043742.1| 3-isopropylmalate dehydratase large subunit [Methanolinea tarda
NOBI-1]
gi|354824345|gb|EHF08597.1| 3-isopropylmalate dehydratase large subunit [Methanolinea tarda
NOBI-1]
Length = 416
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 205/387 (52%), Gaps = 26/387 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL EKIFSR + + GD V VD+ M HD+ GP + F++ G+ V+D K
Sbjct: 2 ASTLVEKIFSRKCAR-DVRAGDVVMAPVDMAMIHDITGPLAVQKFQEMGGKT--VFDPGK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYK-GVCHIALA 186
IV++ DH + A N LR F EQNI+ N D + G+CH +
Sbjct: 59 IVLLFDHQVPADSISAASNHVFLRKFAREQNIE-------------NLDGREGICHQVVM 105
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G PGE+++G DSHTC GA G FATGIG+TD GFVL G + +VP T+R + G
Sbjct: 106 ERGRAAPGEIIVGADSHTCMYGAAGAFATGIGSTDMGFVLKFGVLYFRVPETIRVTVGGR 165
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KDLIL+I G+I GATY+++EF G T + M RMT CNM VE G K G+V
Sbjct: 166 FPGRVGPKDLILEIAGKIGADGATYQAIEFTGETFRTMDMPGRMTCCNMAVEMGAKAGIV 225
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T+ YL + + + SD+ ASF EY FD S+L P VA PH+ D +
Sbjct: 226 PPDEITWSYLASRRDIAPFSLASDDNASFSMEYSFDASRLSPRVAVPHNVDQVVDVAKVA 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
ID+V+IGSCT G+ ED AA V V ++P+++ ++ +
Sbjct: 286 GTHIDQVFIGSCTNGRFEDLKEAADVLKDGTFHPGVRVIIIPSSRTEYLKALKAGL---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG A P CG C+GG
Sbjct: 342 ----IERFVSAGALVEA-PCCGPCMGG 363
>gi|309777583|ref|ZP_07672535.1| 3-isopropylmalate dehydratase, large subunit [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914672|gb|EFP60460.1| 3-isopropylmalate dehydratase, large subunit [Erysipelotrichaceae
bacterium 3_1_53]
Length = 421
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 219/386 (56%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + VN+D+++ +D+ P + F+K +G +V+D KI
Sbjct: 3 MTMTQKILAAHAGLDHVEAGQLIEVNLDMVLGNDITSPVAIKEFEK-YG-FTQVFDPGKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NI++FYD+ ++G + H L ++
Sbjct: 61 SMVMDHFAPNKDIKAAQQCKACRTFAYAKNIEHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIG I V GA YKSMEF G ++ LSM++R+ + NM +EAG KNG+
Sbjct: 171 PHVSGKDVILHIIGMIGVDGALYKSMEFSGIGLQSLSMDDRLCMANMAIEAGAKNGIFAF 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++++ PY+ +D A + + Y D+S++ VA PH P+N E K+
Sbjct: 231 DEITEAYVKERVQRPYKTYEADADAEYSNVYHLDLSQITHTVAFPHLPENTKTIDEIKEP 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V ID+V IGSCT G+ D AA++ V ++PATQ+++ L
Sbjct: 291 VVIDQVVIGSCTNGRLSDMKEAAEILKGKHVAKGVRAIIIPATQEIYKQCIQLGY----- 345
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
++IF +AGC ++P+CG CLGG
Sbjct: 346 ---TEIFIDAGC-VVSTPTCGPCLGG 367
>gi|160895247|ref|ZP_02076019.1| hypothetical protein CLOL250_02807 [Clostridium sp. L2-50]
gi|156863126|gb|EDO56557.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
L2-50]
Length = 441
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 215/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +DV P I + + +V+D+ K
Sbjct: 22 GMTMTQKILAAHAGLDSVEAGQLIEADLDLVLGNDVTTP--VAIHEMDKFNKKEVFDKNK 79
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ + +R+F E IK F+D+ +G + H L +
Sbjct: 80 IALVMDHFTPNKDIKSAEHCKCVREFSAENQIKNFFDVGSMG----------IEHALLPE 129
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE +G DSHTCT GA G F+TG+G+TD + TGK KVP ++F + GE
Sbjct: 130 QGLIVAGETCIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFNIVGEK 189
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+ NM +EAG KNG+ P
Sbjct: 190 APWVSGKDVILHIIGMIGVDGALYKSMEFVGDGIKNLTMDDRFTIANMAIEAGAKNGIFP 249
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ Y+ +D A + EY D+S L P VA PH P+N E D
Sbjct: 250 VDELTEAYMKEHSTKAYKKYEADADAVYDEEYTIDLSTLRPTVAFPHLPENTKTIDEVGD 309
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ D AA + G++V V ++P TQ+V++
Sbjct: 310 IKIDQVVIGSCTNGRISDMRIAADII--KGRQVAPGVRVIVIPGTQEVYLQCIE------ 361
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 362 --EGLMTIFVKAGA-VVSTPTCGPCLGG 386
>gi|373452468|ref|ZP_09544381.1| 3-isopropylmalate dehydratase large subunit [Eubacterium sp.
3_1_31]
gi|371966337|gb|EHO83827.1| 3-isopropylmalate dehydratase large subunit [Eubacterium sp.
3_1_31]
Length = 420
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 218/386 (56%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + V++D+++ +D+ P + F+K E +V+D ++
Sbjct: 3 MTMTQKILAEHAHVAEVKAGQLIEVDLDMVLGNDITSPVAIKEFEKYGFE--QVFDPGRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A + R F +NIK+FYD+ ++G + H L ++
Sbjct: 61 TMVMDHFAPNKDIKAAQQCKACRTFAYAKNIKHFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA F+TG+G+TD + TGK K+P ++F L G++
Sbjct: 111 GIVGPGECIIGADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLA 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G + L++++R+ + NM +EAG KNG+
Sbjct: 171 PNVSGKDVILHIIGMIGVDGALYKSMEFSGVGLRNLTIDDRLAMANMAIEAGAKNGIFAY 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++++ PY+ +D A + + Y D+S ++P +A PH P+N + K+
Sbjct: 231 DEITEAYVKERVHRPYKTYEADSDADYANVYHIDLSAIKPTIAFPHLPENTKTMEDIKEN 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ D AAK+ V T ++PATQ ++ +
Sbjct: 291 IVIDQVVIGSCTNGRLSDMETAAKILKGKHVAKGVRTIIIPATQAIYKECMK-------- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AGC ++P+CG CLGG
Sbjct: 343 RGYMEIFIDAGC-VVSTPTCGPCLGG 367
>gi|416114790|ref|ZP_11593871.1| 3-isopropylmalate dehydratase large subunit [Campylobacter concisus
UNSWCD]
gi|384578044|gb|EIF07316.1| 3-isopropylmalate dehydratase large subunit [Campylobacter concisus
UNSWCD]
Length = 421
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 229/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++S G+ + +D+++ +D+ P S F++ + K+ + +
Sbjct: 4 TITEKIFSDHVGK-EVSAGEIIESKIDMIIGNDITTPISIKQFERSGAK--KLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI T D + I R+F + ++K ++D KD+G + H L ++G
Sbjct: 61 IVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMG----------IEHAILPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP +++ V G++
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPESIKVVFKGKLDK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G ++ LSM++R ++CNM +EAG K+G++ D
Sbjct: 171 HVYGKDLILEIIRQIGVDGALYKALEFSGEVIDALSMDDRFSMCNMAIEAGAKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T ++L+DK +L +P YSDE A + D++KL+P++A P P N R+
Sbjct: 231 EITKEFLKDK-NLRDKPKFFYSDEGAKYDKILEIDVTKLDPVIAYPFLPSNGKSVRQAVR 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ GKKV T L+ PATQK+
Sbjct: 290 DDLTIDQAFIGSCTNGRLSDLRIAAQIL--KGKKVARKTRLIITPATQKI--------AR 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAEKEGLIDIFIEAGA-VVSNPTCGACLGG 368
>gi|357418991|ref|YP_004931983.1| 3-isopropylmalate dehydratase large subunit [Thermovirga lienii DSM
17291]
gi|355396457|gb|AER65886.1| 3-isopropylmalate dehydratase, large subunit [Thermovirga lienii
DSM 17291]
Length = 432
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 212/386 (54%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL I ++ + + L G+ VNVD+ +D+ G + F+K + +V++ ++
Sbjct: 4 TLASAIIAKKTTQKALE-GEICKVNVDLAFANDITGAPAIRAFRKMGAK--QVFNPQRCA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+PDH+ D A ++F +EQ + Y+ + GV H L ++G
Sbjct: 61 ILPDHFTPNKDIAAAEQAKEAKEFALEQGMLYWEQGR-----------VGVEHTFLPEQG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PGE+++G DSHTCT GA G FATG+G+TD + G+ LKVP T+R + G+ P
Sbjct: 110 LILPGEIVIGADSHTCTGGAMGAFATGVGSTDLAAIWALGQTWLKVPKTIRVLFQGKRPA 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+++ + V GA YK++EF G VE L M++R T+ NM +E GGK G+ D
Sbjct: 170 WISGKDLILEVLRNLGVQGALYKALEFSGEAVESLPMDDRFTISNMAIEVGGKTGLFVPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T KY E + S P+EPVY D+ A + D S LEPLVA PH P N A +C+ +K
Sbjct: 230 EKTLKYAEKRASRPFEPVYPDKDAPYERTIEIDTSSLEPLVALPHLPSNVKPASQCEGIK 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSGG 427
+D+V+IGSCT G+ D AA V G+KV T ++PA+Q+V+
Sbjct: 290 VDQVFIGSCTNGRLRDMEQAALVL--KGRKVHPSTRCIIIPASQEVFQACLE-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG +P+CG CLGG
Sbjct: 340 RGYISTFIEAGAAV-CTPTCGPCLGG 364
>gi|404482728|ref|ZP_11017953.1| 3-isopropylmalate dehydratase large subunit [Clostridiales
bacterium OBRC5-5]
gi|404343818|gb|EJZ70177.1| 3-isopropylmalate dehydratase large subunit [Clostridiales
bacterium OBRC5-5]
Length = 418
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 214/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + ++D+++ +D+ P + KK EN KV++ EK
Sbjct: 2 GMTMTQKILAAHAGLDFVEAGQLIEADLDLVLGNDITSPVAINEIKKF--ENKKVFNGEK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ +N RDF E I F+D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAQNCKTCRDFADENEIVNFFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G++
Sbjct: 110 QGLTVAGDCIIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFNLKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA YKSMEF G V LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 SSDVCGKDVILHIIGKIGVDGALYKSMEFAGEGVASLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +D A + D+S L P VA PH P+N + E D
Sbjct: 230 VDDITLDYIKEHSNRSPKIFEADSDAVYDEVIDIDLSALRPTVAFPHLPENTKVIGEFGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQ+++
Sbjct: 290 IKIDQAVIGSCTNGHISDLRSAAAQM--KGKKVAKNVRCIVIPATQEIYKQAIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLVDIFIDAGA-IVSTPTCGPCLGG 366
>gi|336121063|ref|YP_004575838.1| 3-isopropylmalate dehydratase large subunit [Methanothermococcus
okinawensis IH1]
gi|334855584|gb|AEH06060.1| 3-isopropylmalate dehydratase large subunit [Methanothermococcus
okinawensis IH1]
Length = 417
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 215/399 (53%), Gaps = 35/399 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ K ++ GD + +N+D+ MTHD P S FK+ KVWD +KI
Sbjct: 1 MTLAEKILSKKLGK-KVYAGDTIEINIDLAMTHDGTTPLSAKAFKQIAD---KVWDNKKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH + + +A I R+F EQ+I + Y F+ +G+CH L ++
Sbjct: 57 VIVFDHNVPANTAKAANMQKITREFIKEQDIIHHY-------FEG----EGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P V+ G DSHTCT GAFG F+TG G TD G++ TGK +KVP T+R ++G+
Sbjct: 106 GHVKPNMVIAGGDSHTCTYGAFGAFSTGFGATDMGYIFATGKTWMKVPKTIRVNVNGK-N 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+I E+ GATY ++E+ G ++ L ME+RM L NM +E GGK G++ A
Sbjct: 165 EKISGKDIILRICKEVGRRGATYMALEYGGEAIKNLKMEDRMVLSNMAIEMGGKVGIIEA 224
Query: 309 DGTTFKYLEDKTS------LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
D T+ YL+++ S L + DE + DI+ +E +A PH PDN
Sbjct: 225 DDITYNYLKNRISEKELLTLKKNRITVDENEDYYKVIDIDITNMEEQIACPHHPDNVKPV 284
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
E ID+V+IGSCT G+ D AAK GKKV V ++PA++ +
Sbjct: 285 SEVSGTHIDQVFIGSCTNGRLNDLRIAAKYL--KGKKVHEGVRLIVIPASKSILKQALK- 341
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ IF +AG +P CG CLG + A
Sbjct: 342 -------EGLIDIFVDAGA-LICTPGCGPCLGAHQGVLA 372
>gi|260587904|ref|ZP_05853817.1| 3-isopropylmalate dehydratase, large subunit [Blautia hansenii DSM
20583]
gi|260542169|gb|EEX22738.1| 3-isopropylmalate dehydratase, large subunit [Blautia hansenii DSM
20583]
Length = 425
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 214/387 (55%), Gaps = 22/387 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + ++ G + +D+++ +D+ P I + E + V+ ++K
Sbjct: 5 GMTMTQKILAAHAGLEKVEAGQLIEAELDLVLGNDITSP--VAIHEMEKMKAEGVFHKDK 62
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N +R+F I ++D+ ++G + H L +
Sbjct: 63 IALVMDHFIPNKDIKSAENCKCVREFAARHEITNYFDVGEMG----------IEHALLPE 112
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP +R L G+
Sbjct: 113 SGLTVAGDAIIGADSHTCTYGALGAFSTGVGSTDMAAAMVTGKAWFKVPSAIRINLIGKP 172
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL +IG+I V GA YKS+EF G V+ LSM++R T+ NM +EAG KNG+ P
Sbjct: 173 SKWVSGKDVILHLIGKIGVDGALYKSLEFTGEGVKNLSMDDRFTIANMAIEAGAKNGIFP 232
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK- 366
D T +Y+++ + PY+ DE A + EY D+SKL P VA PH P N E +
Sbjct: 233 VDEKTEEYMKEHSKRPYKRYEPDEDAVYDEEYTIDLSKLRPTVAFPHLPSNTKTIDEIQD 292
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
DV I + IGSCT G+ +D AA++ K V ++PATQK+++
Sbjct: 293 DVIIQQSVIGSCTNGRIDDLRCAAQILKNRKVKKGVRCIIIPATQKIYLQALE------- 345
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 346 -EGLLKIFIEAGA-VVSTPTCGPCLGG 370
>gi|167038690|ref|YP_001661675.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter sp.
X514]
gi|297543529|ref|YP_003675831.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|300913750|ref|ZP_07131067.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
sp. X561]
gi|307723233|ref|YP_003902984.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter sp.
X513]
gi|226736008|sp|B0K0Y2.1|LEUC_THEPX RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|166852930|gb|ABY91339.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
sp. X514]
gi|296841304|gb|ADH59820.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|300890435|gb|EFK85580.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
sp. X561]
gi|307580294|gb|ADN53693.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
sp. X513]
Length = 418
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 226/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ G+ + V+VD+++ +DV P + F+K E +V+D+ K
Sbjct: 2 GLTLTQKILS-AKIGREVKAGELIEVDVDMVLGNDVTAPVAIKEFEKIGKE--EVFDKTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F + I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIMRKFAKKHGIVNFFEVGQMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LS+++R T+ NM +EAG KNG+
Sbjct: 169 QKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSIDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ DE A + Y ++ ++ P VA PH P+N E
Sbjct: 228 FDEITEAYVKGRAKREYKVFERDEDAEYSEVYEINLDEIRPQVAFPHLPENTRSIDEVGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRLSDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG AR +A+
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGILARGERALAT 378
>gi|269792975|ref|YP_003317879.1| 3-isopropylmalate dehydratase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100610|gb|ACZ19597.1| 3-isopropylmalate dehydratase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 420
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 219/391 (56%), Gaps = 25/391 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+ + + +P + GD V V M+HD P + FKK G + +V+D +IV
Sbjct: 6 TFAEKVLGKWAGRP-VKAGDVVTVEPHFCMSHDNAAPIAR-TFKK-IGVS-RVFDPNRIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + +N +R+F EQ I +F+D+ G GVCH + +EG
Sbjct: 62 FILDHAVPAPSDDHAQNHKEIREFVREQGIPHFFDVTSKG---------GVCHQKMCEEG 112
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG +++G+DSHTCT GAFG F+TGIG ++ TGK+ +VP +++ + G P
Sbjct: 113 YALPGLIMIGSDSHTCTYGAFGAFSTGIGRSEMAAAWATGKIWFRVPESMKITVTGSFPK 172
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+IIG+I GA Y S+EF G + ++S+ ERMTLCNM +E G KN V P D
Sbjct: 173 GVSAKDLILKIIGDIGADGADYMSVEFHGEGILQMSLSERMTLCNMGIEMGAKNAVCPPD 232
Query: 310 GTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
++ D S +E +++D+ A++ E + +S+L P VAKPH+ DN A + K
Sbjct: 233 QKVLDHVRDIAKSDQWEAIWADQGATYAKELSYCLSELVPGVAKPHTVDNYAPVDQVKGA 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+I + +IGSCT G+ ED AA + G++V V T ++PA+ +V+ +
Sbjct: 293 QIHQAFIGSCTNGRIEDLREAATIL--KGRQVAVRTIVIPASWRVYRQAME--------E 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ F +AGC ++P CG C+G + A
Sbjct: 343 GLLETFLDAGC-VISNPGCGPCMGNHQGILA 372
>gi|422343387|ref|ZP_16424315.1| 3-isopropylmalate dehydratase large subunit [Selenomonas noxia
F0398]
gi|355378694|gb|EHG25874.1| 3-isopropylmalate dehydratase large subunit [Selenomonas noxia
F0398]
Length = 418
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 216/387 (55%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR K
Sbjct: 1 MNMSEKILARHAGLDHVEPGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRTK 56
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L +
Sbjct: 57 IALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVILPE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 107 KGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVRLTGKK 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAGGKNG+ P
Sbjct: 167 PADISGKDVILTLIGMIGVDGALYQSLEFTGEGVADLTMTDRLTIANMAIEAGGKNGIFP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D Y+E++ P+EPV++D A + ++S L P+V+ PH P+N + +
Sbjct: 227 YDDVCRAYVEERMKAPFEPVHADPDAQYARTVEINLSALRPVVSFPHLPENTKRVMDIAE 286
Query: 368 -VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++ID+V IGSCT G+ ED AA++ +V ++P + V+ + S
Sbjct: 287 PIEIDQVVIGSCTNGRLEDMEIAAEILKGHTVHERVRCIVIPGSPWVYQE--------SM 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 339 RRGYLDIFMDAGAAI-STPTCGPCLGG 364
>gi|326390349|ref|ZP_08211908.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392940037|ref|ZP_10305681.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
siderophilus SR4]
gi|325993626|gb|EGD52059.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392291787|gb|EIW00231.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
siderophilus SR4]
Length = 418
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 227/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ PG+ + V+VD+++ +DV P + F+K G + +V+D K
Sbjct: 2 GLTLTQKILS-AKVGREVKPGELIEVDVDMVLGNDVTAPVAIKEFEK-IGID-RVFDNTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F + I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIMRKFAKKHGIVNFFEVGQMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LS+++R T+ NM +EAG KNG+
Sbjct: 169 QKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSIDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ DE A + Y ++ ++ P VA PH P+N E
Sbjct: 228 FDEITDAYVKGRAKREYKVFERDEDAEYSEVYEINLDEIRPQVAFPHLPENTRNIDEVGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRISDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +A+
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGILAKGERALAT 378
>gi|312879413|ref|ZP_07739213.1| 3-isopropylmalate dehydratase, large subunit [Aminomonas
paucivorans DSM 12260]
gi|310782704|gb|EFQ23102.1| 3-isopropylmalate dehydratase, large subunit [Aminomonas
paucivorans DSM 12260]
Length = 431
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 208/386 (53%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL E + + +E P ++PG V VD +D+ P + F++ +V+DR +
Sbjct: 4 TLAEALIASRTEDP-VAPGSICRVRVDFAFANDITAPPAIREFRRMGA--LEVFDRARCA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+PDH+ D + + R F EQ + ++ P GV H L +EG
Sbjct: 61 IVPDHFTPPKDIASAEQLKTCRAFAREQGLLFW-----------EPGQCGVEHAFLPEEG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+++LG DSH+CT G G FATG+G+TD G+ L+VP T R V +G
Sbjct: 110 YILPGDLVLGADSHSCTGGTLGAFATGVGSTDLAAAWALGEAWLRVPETTRVVYEGTPSP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL +IG I V GA Y+++EF G + L +++R T+ NM +EAGGK G+ P D
Sbjct: 170 WICGKDLILSLIGRIGVEGARYRALEFHGEALASLDLDDRFTMANMAIEAGGKCGLFPPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y+ + P++PV D A + S FD S LEPLVA PH P+N A EC +
Sbjct: 230 RDTLEYVAPRAKRPFKPVQPDRDARYASAETFDASALEPLVALPHLPENVRPAGECAHLT 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V+IGSCT G+ D AAA+V G++V V ++PA+ V+ +
Sbjct: 290 VDQVFIGSCTNGRLRDLEAAARVL--KGRRVHEGVRLVVIPASYPVFSEAMK-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q F +AG +PSCG CLGG
Sbjct: 340 RGWLQTFLDAGAAV-CTPSCGPCLGG 364
>gi|325290263|ref|YP_004266444.1| 3-isopropylmalate dehydratase large subunit [Syntrophobotulus
glycolicus DSM 8271]
gi|324965664|gb|ADY56443.1| 3-isopropylmalate dehydratase, large subunit [Syntrophobotulus
glycolicus DSM 8271]
Length = 424
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 222/401 (55%), Gaps = 22/401 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT++EKI + + ++ PG+ + +DI++ +DV GP + F+K G + +V+DR+K
Sbjct: 2 GMTISEKILAAHAGVDRVVPGEIINAKLDIVLANDVTGPVAIREFRK-LGID-QVFDRDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++PDH+ D + I+RDF EQ I ++++ +G + H L +
Sbjct: 60 VVLVPDHFTPNKDIASAEQCKIMRDFVREQEITHYWESGRVG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG-E 246
+G PG++++G DSHTCT GA G F+TG+G+TD + TG+ K+P T+RFV G +
Sbjct: 110 QGVVLPGDLIIGADSHTCTYGALGAFSTGVGSTDLAAGMATGEAWFKIPETIRFVFHGNQ 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++ KDLIL IIG+I V GA Y +MEF G ++ LSM+ R+T+ NM +EAG K G++
Sbjct: 170 YQPWISGKDLILYIIGQIGVDGALYSAMEFAGEGIKALSMDNRLTISNMAIEAGAKAGLI 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T Y+ + PY+ SD A + + + + VA PH P+N E
Sbjct: 230 EPDEITLAYVSSRAKRPYKIYNSDSDAKYAQVFDYQTKDIPLQVACPHLPENTKSVDEVS 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+K+D+V IGSCT G+ ED AA++ + ++ + P TQ++ ++
Sbjct: 290 GIKMDQVVIGSCTNGRLEDLEIAARILKGNSVHPEIRCLVFPGTQEIMLEAMR------- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + EAG ++P+CG CLGG A+ + +++
Sbjct: 343 -RGYIETLIEAGAAV-STPTCGPCLGGHMGILAKGEKALST 381
>gi|331002371|ref|ZP_08325889.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330410187|gb|EGG89621.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 418
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 213/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+D+++ +D+ P + KK EN K++D K
Sbjct: 2 GMTMTQKILAAHAGLDFVEAGQLIEANLDLVLGNDITSPVAINEMKKF--ENQKLFDGGK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ N I RDF E I F+D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAENCKICRDFANENEIVNFFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG G+TD + TGK KVP ++F L G++
Sbjct: 110 QGLTVSGDCIIGADSHTCTYGALGAFSTGTGSTDMAAAMITGKAWFKVPSAIKFNLKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA YKSMEF G V LS+++R T+CNM +EAGGKNG+ P
Sbjct: 170 SKDVCGKDVILHIIGKIGVDGALYKSMEFAGEGVASLSIDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +DE A + D+S L P VA PH P+N + E D
Sbjct: 230 VDDITLCYIKEHSNRTPKIFEADEDAVYDEVIDIDLSALRPTVAFPHLPENTKVVGEFGD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQ+++
Sbjct: 290 IKIDQAVIGSCTNGHISDLRSAAAQM--KGKKVAKDVRCIVIPATQEIYKQAVK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLVDIFIDAGA-IFSTPTCGPCLGG 366
>gi|345887732|ref|ZP_08838895.1| 3-isopropylmalate dehydratase large subunit [Bilophila sp. 4_1_30]
gi|345041497|gb|EGW45645.1| 3-isopropylmalate dehydratase large subunit [Bilophila sp. 4_1_30]
Length = 419
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI +++ G V ++ ++ +D+ GP + F+ AKV+D++++
Sbjct: 4 TLAQKILQAHTDEEVREAGQIVNCHLSGVLANDITGPLAIKSFRAMGA--AKVFDKDRVF 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V + R F E + ++Y+ D G V H L ++G
Sbjct: 62 LVMDHFTPQKDIDSANQVMVTRKFAQEMGVTHYYEGGDCG----------VEHALLPEQG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++++G DSHTCT G G FATG+G+TD + G++ KVPPT+R +G+MP
Sbjct: 112 LVKPGDLVIGADSHTCTYGGLGAFATGLGSTDVAAGMALGRLWFKVPPTIRVEFEGKMPK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+L KDLIL++IG+I V GA YK++EF G T+ L +E R+ + NM +EAGGK G+ P+D
Sbjct: 172 WLRGKDLILRLIGDIGVDGALYKALEFGGETLSELDVEARLCISNMAIEAGGKCGLFPSD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y D S + + +D A++ R D+S +EP V+ PH P+N E KDV
Sbjct: 232 EKTLAYCRDHNSPDAKLIAADAGATYERIVRIDVSNMEPQVSCPHLPENTKPVSEVKDVT 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+++V IGSCT G+ D AA+V G+KV V ++PAT +W
Sbjct: 292 VNQVVIGSCTNGRISDMRDAAEVL--KGRKVAKGVRCIVLPATPTIWRQAMK-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC P+CG CLGG
Sbjct: 342 EGLFDIFSDAGC-IVGPPTCGPCLGG 366
>gi|302386583|ref|YP_003822405.1| 3-isopropylmalate dehydratase large subunit [Clostridium
saccharolyticum WM1]
gi|302197211|gb|ADL04782.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
saccharolyticum WM1]
Length = 421
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 216/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + Q+ G + +D+++ +D+ P I + E ++ ++K
Sbjct: 2 GMTMTQKILAAHAGLSQVKAGQLIEAELDLVLGNDITSP--VAIKEMEKFNKETIFHKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+I D ++ N RDF I ++D+ +G + H L +
Sbjct: 60 IALVMDHFIPNKDIKSAENCKCCRDFAGRHEITNYFDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G+
Sbjct: 110 KGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSAIKFELIGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 SQWVGGKDVILHIIGMIGVDGALYKSMEFSGEGIRNLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y++D + Y+ +D+ A + + Y D+S LEP V+ PH P+N ++
Sbjct: 230 VDDLAVQYMKDHSKREYKIYEADQDAEYEAVYTIDLSTLEPTVSFPHLPENTRTIGTFEE 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+ +D+ IGSCT G+ +D AA V G+KV V ++PATQ++++ S
Sbjct: 290 IPVDQAVIGSCTNGRLDDMRIAAAVM--KGRKVAKNVRCIVIPATQEIYLQ--------S 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 340 MKEGLLEIFIEAGA-VVSTPTCGPCLGG 366
>gi|149194922|ref|ZP_01872015.1| 3-ISOPROPYLMALATE DEHYDRATASE, LARGE SUBUNIT [Caminibacter
mediatlanticus TB-2]
gi|149134843|gb|EDM23326.1| 3-ISOPROPYLMALATE DEHYDRATASE, LARGE SUBUNIT [Caminibacter
mediatlanticus TB-2]
Length = 425
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 224/395 (56%), Gaps = 33/395 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKIF+ + ++ PG+ + +VD+ + +D+ P S F++ + K+ +
Sbjct: 2 GMTITEKIFADHIGR-EVKPGEIIMCDVDMTIGNDITTPISIKAFRESGAK--KLAKPDN 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+ DH+I D + I R+F E N+K F+D KD+G + H L +
Sbjct: 59 FAIVLDHFIPPKDIASANQAKINREFAYEHNLKNFFDEKDMG----------IEHRLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TG+G+TD F + TGK KVP +++ V G+
Sbjct: 109 KGLVIPGDVIIGADSHTCTHGALGAFSTGMGSTDIAFSMITGKSWFKVPESIKVVFTGQR 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+++ KDLIL++I I V GA YK++EF G T+E L M++RM+LCNMV+EAG KNG++
Sbjct: 169 GEHVYGKDLILELIRRIGVDGALYKALEFTGDTIENLPMDDRMSLCNMVIEAGAKNGIIA 228
Query: 308 ADGTTFKYLED-KTSLPYEPV----YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RAL 361
D T +LE+ K P YSD A ++ D+ LEP+VA P+ P N + +
Sbjct: 229 YDKITESFLEEVKKHNPLRSTPKIHYSDPDAKYVKIIEIDVDNLEPMVAYPYLPSNGKPI 288
Query: 362 ARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVY 418
+ K D++I +VYIGSCT G D AA + GK+V +V + PATQ+++
Sbjct: 289 SEAVKDDIEIHQVYIGSCTNGTLSDLRTAANIL--KGKRVHKRVRLIVTPATQRIYKQ-- 344
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + +AG A+P+CGACLGG
Sbjct: 345 ------AEHEGIIDTLIDAGA-VVANPTCGACLGG 372
>gi|304315552|ref|YP_003850697.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777054|gb|ADL67613.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 418
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 225/395 (56%), Gaps = 27/395 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI + + + PGD + ++VD+++ +DV P + F K +N V+D+EK
Sbjct: 2 GLTLTQKILADKAGY-DVHPGDLIEIDVDMVLGNDVTSPVAIKEFLKIGVKN--VFDKEK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F E I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIVRKFAREYGIVNFFEVGKMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TGIG+TD + TGK KVP +RF L G++
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGAITCFSTGIGSTDMACAMATGKAWFKVPEAIRFNLKGKL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA YKSMEF G + LS+++R T+ NM +EAG KNG+
Sbjct: 169 NKWVSGKDVILYIIGMIGVDGALYKSMEFTG-DISSLSIDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + + Y+ +D+ A ++ Y D+SK++P VA PH P+N E +
Sbjct: 228 YDEITETYVKGRANRKYKVFKADKDADYVESYDIDLSKIKPQVAFPHLPENTKPIDEVGN 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ D +V GKKV V + PATQ ++++
Sbjct: 288 IKIDQVVIGSCTNGRISDMEVTYEVL--KGKKVHPDVRLIIFPATQDIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F +AG ++P+CG CLGG A+
Sbjct: 340 --RGYIEEFIKAGA-AVSTPTCGPCLGGHMGILAK 371
>gi|261367547|ref|ZP_05980430.1| 3-isopropylmalate dehydratase, large subunit [Subdoligranulum
variabile DSM 15176]
gi|282570330|gb|EFB75865.1| 3-isopropylmalate dehydratase, large subunit [Subdoligranulum
variabile DSM 15176]
Length = 419
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 216/386 (55%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + G + N+DI++ +D+ P + F+K ++ V+D+ +
Sbjct: 2 GMTMTQKILAAHCGESTVKAGQLINANLDIVLGNDITTPVAINEFEKAGFDS--VFDKTR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ I+ DH++ D ++ R+F + +I FYD+ +G + H L +
Sbjct: 60 VNIVLDHFVPNKDIKSATQSKQCREFANKYDILNFYDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + G KVP ++ VL+G +
Sbjct: 110 KGIVTAGDCIIGADSHTCTYGAVGAFSTGVGSTDMAAGMAKGVAWFKVPAAIKVVLNGSL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL +IGEI V+GA YKS+EF G V+ L+ME+R+ +CNM +EAG KNG+ P
Sbjct: 170 HRPVTGKDVILHLIGEIGVSGALYKSLEFTGDGVKSLTMEDRLCICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D YL+ ++ P+ +D A + D+ LEP V+ PH P+N LA+E KD
Sbjct: 230 VDEICEAYLKGRSQRPWVKYEADPDAEYERTVIIDLDTLEPTVSYPHLPENTHLAKEGKD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID++ IGSCT G+ ED AA ++ V ++PAT V+ +
Sbjct: 290 IKIDQIVIGSCTNGRIEDMQAAYEILKGKHIAKGVRGIIIPATMAVYKECIL-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++ F +AGC ++P+CG CLGG
Sbjct: 342 RGYTEAFIDAGC-IVSTPTCGPCLGG 366
>gi|365154660|ref|ZP_09351090.1| 3-isopropylmalate dehydratase large subunit [Campylobacter sp.
10_1_50]
gi|363649443|gb|EHL88557.1| 3-isopropylmalate dehydratase large subunit [Campylobacter sp.
10_1_50]
Length = 421
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 228/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++S G+ + +D+++ +D+ P S F++ + K+ + +
Sbjct: 4 TITEKIFSDHVGK-EVSAGEIIESKIDMIIGNDITTPISIKQFERSGAK--KLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI T D + I R+F + ++K ++D KD+G + H L ++G
Sbjct: 61 IVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMG----------IEHAILPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP +++ V G++
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPESIKVVFKGKLDK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G ++ LSM++R ++CNM +EAG K+G++ D
Sbjct: 171 HVYGKDLILEIIRQIGVDGALYKALEFSGEVIDSLSMDDRFSMCNMAIEAGAKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T ++L+DK +L +P YSDE A + D++ L+P++A P P N R+
Sbjct: 231 EITKEFLKDK-NLRNKPKFFYSDEGAKYDKILEIDVTNLDPVIAYPFLPSNGKSVRQAVR 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ GKKV T L+ PATQK+
Sbjct: 290 DDLAIDQAFIGSCTNGRLSDLRIAAQIL--KGKKVARKTRLIITPATQKI--------AR 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAEKEGLIDIFIEAGA-VVSNPTCGACLGG 368
>gi|238917293|ref|YP_002930810.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Eubacterium eligens ATCC 27750]
gi|238872653|gb|ACR72363.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Eubacterium eligens ATCC 27750]
Length = 586
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 216/402 (53%), Gaps = 29/402 (7%)
Query: 53 QQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIF 112
++SE K+ MT+ EKI +RA+ Q+ GD V +D LM++D + G++
Sbjct: 158 EESESTAVPADEAKHGMTIAEKIIARAAGLSQVKAGDIATVTLDRLMSNDGTTHLTIGMY 217
Query: 113 KKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFK 172
+K +N + D++K+V I DH I + + + +RDF +IK++
Sbjct: 218 EKL--KNPHIADKDKLVWIVDHNIPSDSPKTAASQKKMRDFAKANDIKFY---------- 265
Query: 173 ANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVL 232
+ +GVCH + E H PGE++ G DSHTC GA G F TG+G TD + + TG
Sbjct: 266 ---EGEGVCHQVM-MENHVVPGELIFGADSHTCAYGALGAFGTGVGCTDYLYAMVTGTSW 321
Query: 233 LKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTL 292
+ VP TLRF L G++ D + A+DLIL IIG+I GA YK+MEF G + LSM +R+++
Sbjct: 322 VMVPGTLRFNLKGKLNDGVYARDLILSIIGKIGANGANYKAMEFAGEGLHSLSMADRISI 381
Query: 293 CNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAK 352
CN+ VEAG K ++ D YL++ P SD+ A F Y D+S ++P+VAK
Sbjct: 382 CNLCVEAGAKTALMEVDDVAMDYLKEHGREPKACFTSDDDAVFEQVYDIDLSTIQPIVAK 441
Query: 353 PHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPAT 410
PH DN A+E VKID ++GSC G+ ED A + GKKV KV +VPA+
Sbjct: 442 PHFVDNVVPAKESLGVKIDEAFLGSCNNGRIEDLRVGAAII--KGKKVAPKVRFLVVPAS 499
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ V++ + IF +AG +P+C C G
Sbjct: 500 RSVYLQAMK--------EGLLDIFMDAGA-IVMNPNCSVCWG 532
>gi|268680875|ref|YP_003305306.1| 3-isopropylmalate dehydratase, large subunit [Sulfurospirillum
deleyianum DSM 6946]
gi|268618906|gb|ACZ13271.1| 3-isopropylmalate dehydratase, large subunit [Sulfurospirillum
deleyianum DSM 6946]
Length = 421
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 224/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS P + G+ + +D+++ +D+ P S F++ K+ + +
Sbjct: 4 TITEKIFSDHVGHPVFA-GEIIKSKIDMVIGNDITTPISIKAFEQSGA--TKLANPDGFS 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I R+F + ++K+++D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDIASANQAKISREFAYKHDLKHYFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD F + TG+ KVP +++ V G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFATGMGSTDLAFAMITGENWFKVPESIKVVFSGKPKQ 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I + V GA Y+++EF G T+ LSM++R +LCNM +EAG K+G+V D
Sbjct: 171 HVYGKDLILEVIRLLGVDGALYRTLEFTGDTIGHLSMDDRFSLCNMAIEAGAKSGIVAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T +L DK +L EP YSD+ A+++ D++ L+P++A P P N E
Sbjct: 231 EITKAFLSDK-NLAREPKFFYSDDDATYVQVLHIDVANLDPVIAYPFLPSNGKSINEAVK 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+V+IGSCT G+ ED AA + G+KV T L+ PATQK+ +
Sbjct: 290 DDLAIDQVFIGSCTNGRLEDLRIAASIL--KGRKVARKTRLIITPATQKISLQAQK---- 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CGACLGG
Sbjct: 344 ----EGLVEIFIEAGA-VFSNPTCGACLGG 368
>gi|304313991|ref|YP_003849138.1| 3-isopropylmalate dehydratase, large subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302587450|gb|ADL57825.1| predicted 3-isopropylmalate dehydratase, large subunit
[Methanothermobacter marburgensis str. Marburg]
Length = 418
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 22/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKK--EFGENAKVWDRE 126
M +TEKI + A+ +++PG+ + VD+ MTHD P + F++ G +VWD E
Sbjct: 1 MNITEKILADAAGVAEVTPGEIIEARVDLAMTHDGTSPPTIRTFREIASRGGPDRVWDPE 60
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++V++ DH + + A + +F EQ I + + +G+CH L
Sbjct: 61 RMVMVFDHNVPPNTIGAAEFQRVTSEFASEQGINNIFK-----------NAEGICHQVLP 109
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G RPG V++G DSHTCT GAFG FATG+G TD V TGK VP +R + GE
Sbjct: 110 EKGFVRPGMVIVGADSHTCTYGAFGAFATGMGATDMAMVFATGKTWFMVPEAMRIEVTGE 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ + AKD+IL+IIGEI V GATY+++EF G+TV+ + + RMT+CNM VE G KNG++
Sbjct: 170 LQGFTTAKDVILKIIGEIGVDGATYRAVEFTGSTVDEMDVAGRMTICNMAVEMGAKNGIM 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+Y++ +T + SD + ++ ++ FD+S LEP VA P DN A +
Sbjct: 230 EPSRRIIQYVKSRTGRDFRVYRSDGDSQYVEDHHFDVSDLEPQVACPDDVDNVAPVYRVE 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
ID ++GSCT G+ ED AA+V V + PA++++++
Sbjct: 290 GTHIDEAFLGSCTNGRYEDLKMAAEVLGDRRVHDDVRFIVSPASREIYLRALE------- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ F AG +P CG CLG
Sbjct: 343 -DGIIETFLRAGA-IVCNPGCGPCLG 366
>gi|427406953|ref|ZP_18897158.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
F0473]
gi|425707428|gb|EKU70472.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
F0473]
Length = 420
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 213/387 (55%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + G V +D+++ +DV GP S KEF + + V+DREK
Sbjct: 3 MNMSEKILARHAGLDHVEAGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDREK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D +++ I+RDF + NI ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSSELAKIMRDFARKHNILHYYEQGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L GE
Sbjct: 109 KGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGEK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+ P
Sbjct: 169 PADISGKDVILTLIGMIGVDGALYRSLEFTGEGVADLTMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
D Y+ + + Y P +D AS++ D+S L P+VA PH P+N R + +
Sbjct: 229 YDDVCRDYVAGRMTADYMPAAADPDASYVQTVEIDLSALRPVVAFPHLPENTRRVMDLTE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+V ID+V IGSCT G+ ED AA++ V ++P + V+ + S
Sbjct: 289 EVPIDQVVIGSCTNGRLEDMEIAAEILKGHTVHPNVRCIVIPGSPWVYQE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 341 RRGYLEIFMEAGAAV-STPTCGPCLGG 366
>gi|20806559|ref|NP_621730.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
tengcongensis MB4]
gi|22001747|sp|Q8RDK2.1|LEUC_THETN RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|20514998|gb|AAM23334.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 418
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 227/402 (56%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ PG+ + ++VD+++ +D+ P + F+K G + KV+D K
Sbjct: 2 GLTLTQKILS-AKAGREVKPGELIEIDVDMVLGNDITAPVAIKEFEK-IGVD-KVFDNTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ + D ++ V+++R F + NI F+++ +G + H L +
Sbjct: 59 IALVPDHFVPSKDIKSAEQVNVMRKFAKKYNIVNFFEVGRMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA FATG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 QGLVLPGDVVIGADSHTCTYGALTCFATGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LS+++R T+ NM +EAG KNG+
Sbjct: 169 GKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSIDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ DE A + ++ + P VA PH P+N E
Sbjct: 228 FDEITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDEVGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A ++ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRLSDMEIAYRIL--KGKKVHPDVRLIIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +A+
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGVLAKGERALAT 378
>gi|218886883|ref|YP_002436204.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|226735959|sp|B8DM92.1|LEUC_DESVM RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|218757837|gb|ACL08736.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 418
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 217/403 (53%), Gaps = 28/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI +++ + G V V + + +D+ P + F+ + KV+DR+K
Sbjct: 2 AHTLAQKILQAHTDEAITAAGQIVRCRVSLALANDITAPLAIKSFRAMGAK--KVFDRDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+ D + + V + R+F E + ++Y+ D G V H L +
Sbjct: 60 VALVMDHFTPQKDIASAQQVKLTREFAREMGVTHYYEGGDCG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSHTCT G G FATG G+TD + G+ KVPPT+R G +
Sbjct: 110 LGLVGPGDVVVGADSHTCTYGGLGAFATGFGSTDVAGAMALGETWFKVPPTIRATFTGTL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ AKDLIL++IGEI V GA Y+++EF G +E LS+E RMT+ NM +EAGGK G+
Sbjct: 170 PKWVGAKDLILRLIGEIGVDGALYRALEFDGAAIEALSVEGRMTIANMAIEAGGKAGLFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y + P+ +D A++ E FD+S +EPLVA PH P+N E +
Sbjct: 230 ADAKTLAYTAAR-GRKDAPLSADPGATYERELTFDVSGMEPLVACPHLPENVKPVGEVRG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V +D+V IGSCT G+ D AA+V G+KV V ++PAT VW +
Sbjct: 289 VTLDQVVIGSCTNGRISDMREAAEVL--KGRKVAKGVRCIVLPATPGVWKEALK------ 340
Query: 426 GGKTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F E+GC PA +CG CLGG A +A+
Sbjct: 341 --EGLIETFMESGCIVGPA--TCGPCLGGHMGILADGERAIAT 379
>gi|297620146|ref|YP_003708251.1| 3-isopropylmalate dehydratase [Methanococcus voltae A3]
gi|297379123|gb|ADI37278.1| 3-isopropylmalate dehydratase [Methanococcus voltae A3]
Length = 424
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 213/400 (53%), Gaps = 38/400 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ + ++ G+ V V+VDI MTHD P + F+K KVW+ +KI
Sbjct: 1 MTLAEKIMSKKMGR-EVVAGETVEVDVDIAMTHDGTTPLTVKTFEKIAN---KVWNPDKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH + + +A I R+F EQ IK +Y +G+CH L +
Sbjct: 57 VIVFDHNVPANTAKAANMQVITRNFVNEQGIKNYY-----------KGGEGICHQLLPEN 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH P ++ G DSHTCT GAFG FATG G TD G++ GK LKVP T+R + G +
Sbjct: 106 GHVLPNTIITGGDSHTCTHGAFGAFATGFGATDMGYIYAMGKTWLKVPETIRIEVSG-VN 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL+ EI +GATY ++E+ G V+ L M++RMT+ NM +E GGK G++ A
Sbjct: 165 ERIFGKDIILKTCKEIGRSGATYMALEYGGNAVKNLDMDDRMTMSNMAIEMGGKTGLIEA 224
Query: 309 DGTTFKYL------EDKTS-LPYEPVYSD------EKASFLSEYRFDISKLEPLVAKPHS 355
D TT+ YL E K + L E + SD E S+ FDI+ +E VA PH
Sbjct: 225 DDTTYNYLARAGVNESKIAELKKERLTSDYYNSNLENDSYYDVVEFDITDMEEQVACPHH 284
Query: 356 PDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWM 415
PDN K ++ID+V+IGSCT GK D AAK S V ++PA++ ++
Sbjct: 285 PDNVTDVSNIKGLEIDQVFIGSCTNGKINDLRIAAKYLKNSKVHRNVRLIIIPASKTIFN 344
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ Q F +AG +P CG CLG +
Sbjct: 345 QALN--------EGLIQTFIDAGA-MICTPGCGPCLGAHQ 375
>gi|317486013|ref|ZP_07944868.1| 3-isopropylmalate dehydratase [Bilophila wadsworthia 3_1_6]
gi|316922786|gb|EFV44017.1| 3-isopropylmalate dehydratase [Bilophila wadsworthia 3_1_6]
Length = 419
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI +++ G V ++ ++ +D+ GP + F+ AKV+D++++
Sbjct: 4 TLAQKILQAHTDEEVREAGQIVNCHLSGVLANDITGPLAIKSFRAMGA--AKVFDKDRVF 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V + R F E ++ ++Y+ D G V H L ++G
Sbjct: 62 LVMDHFTPQKDIDSANQVMVTRKFAQEMDVTHYYEGGDCG----------VEHALLPEQG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++++G DSHTCT G G FATG+G+TD + G++ KVPPT+R +G+MP
Sbjct: 112 LVKPGDLVIGADSHTCTYGGLGAFATGLGSTDVAAGMALGRLWFKVPPTIRVEFEGKMPK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+L KDLIL++IG+I V GA YK++EF G T+ L +E R+ + NM +EAGGK G+ P+D
Sbjct: 172 WLRGKDLILRLIGDIGVDGALYKALEFGGETLSELDVEARLCISNMAIEAGGKCGLFPSD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y D S + + D A++ R D+S +EP V+ PH P+N E KDV
Sbjct: 232 EKTLAYCRDHNSPDAKLIAPDAGATYERIVRIDVSNMEPQVSCPHLPENTKPVSEVKDVT 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+++V IGSCT G+ D AA+V G+KV V ++PAT +W
Sbjct: 292 VNQVVIGSCTNGRISDMRDAAEVL--KGRKVAKGVRCIVLPATPTIWRQAMK-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC P+CG CLGG
Sbjct: 342 EGLFDIFTDAGC-IVGPPTCGPCLGG 366
>gi|225848598|ref|YP_002728761.1| 3-isopropylmalate dehydratase large subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643429|gb|ACN98479.1| 3-isopropylmalate dehydratase, large subunit [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 431
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 220/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + K + PG+ V V VD+ + +D+ P + +K +G + KV D K
Sbjct: 2 GMTITEKIIAAHAGKDYVEPGELVTVKVDLAIANDITAPLAIKQLEK-YGID-KVHDPNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D + + + I RDF + IK +++ +D GV H L +
Sbjct: 60 IALVMDHFFPPKDILSAQQIKISRDFAKKMGIKNYFEGQD----------SGVMHTLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT G G F+TG+G+TD ++ TG+ L+VP T++F G+
Sbjct: 110 KGFVVPGDLVIGADSHTCTYGGIGAFSTGVGSTDIAYIWATGETWLRVPETMKFTFYGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD +L +IG+I V GA YK+ME+ G ++ L ++ R+T+ NM +EAGGKN V+
Sbjct: 170 QKWVGGKDFVLTVIGKIGVDGALYKAMEYHGEAIKALDIDNRLTIANMAIEAGGKNAVIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T +++ +T+ ++ SD A + EY FD +K+EP+VA P+ P N E
Sbjct: 230 ADEKTIEWVRKRTNREFKIYKSDPDAKYCCEYEFDANKIEPVVACPNLPSNVKPVSEVAG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
ID+V+IGSCT G+ D AA + GKKV +V ++PA+ +++
Sbjct: 290 THIDQVFIGSCTNGRLSDLRIAAAIL--KGKKVHPEVRCIVIPASDQIYKQALH------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +I +AGC S +CG CLGG
Sbjct: 342 --EGIIEILADAGCLISTS-TCGPCLGG 366
>gi|227498842|ref|ZP_03928982.1| 3-isopropylmalate dehydratase [Acidaminococcus sp. D21]
gi|352685752|ref|YP_004897737.1| 3-isopropylmalate dehydratase [Acidaminococcus intestini RyC-MR95]
gi|226904294|gb|EEH90212.1| 3-isopropylmalate dehydratase [Acidaminococcus sp. D21]
gi|350280407|gb|AEQ23597.1| 3-isopropylmalate dehydratase [Acidaminococcus intestini RyC-MR95]
Length = 418
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 212/387 (54%), Gaps = 25/387 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
MT+T+KI ++ + K + PGD + +D ++ +D+ P + KEF + + V+D++
Sbjct: 2 GMTMTQKILAKHAGKDLVKPGDLITCRLDRVLANDITAPPAI----KEFEKIGRPVFDKD 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+IV++PDH+I D ++ I+RDF +I ++Y+ G+ H+ L
Sbjct: 58 RIVLVPDHFIPNKDIKSAGLAKIVRDFAKAHHITHYYET----------GRAGIEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA G FATG+G+TD G + TG KVP ++ ++ G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGALGGFATGVGSTDLGAAMATGTCWFKVPEAIKVIITGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD++L +IG I V GA Y+S+EF G + LSM +R T+ NM +EAG KNG+
Sbjct: 168 KPADITGKDVMLTLIGMIGVDGALYQSLEFTGDGIAELSMTDRFTMANMAIEAGAKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D T Y + + YE V +D A + D++ L P+VA PH P N
Sbjct: 228 PVDEKTKAYEQGRVE-DYEIVTADSDAVYKRTVTIDLTALTPVVAFPHLPGNTKAIGTFG 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
D+ ID+V IGSCT G+ ED AAK+ V ++P +Q+V+ +
Sbjct: 287 DIPIDQVVIGSCTNGRLEDLAIAAKILEGRTVHPDVRCIVIPGSQEVYKEAMK------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
K F +AGC ++P+CG CLGG
Sbjct: 340 -KGYIDTFIDAGC-VVSTPTCGPCLGG 364
>gi|304437460|ref|ZP_07397418.1| 3-isopropylmalate dehydratase large subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369510|gb|EFM23177.1| 3-isopropylmalate dehydratase large subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 420
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 208/387 (53%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR K
Sbjct: 3 MNMSEKILARHAGLDHVEPGQLVVCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D ++ I+RDF + NI ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSAELAKIMRDFAHKHNILHYYEQGRVG----------IEHVILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 109 RGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGIATGEAWFKVPEAINVHLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA YKS+EF G V LSM +R+T+ NM +EAG KNG+ P
Sbjct: 169 PQDISGKDVILTLIGMIGVDGALYKSLEFTGEGVASLSMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D Y+E + + P+ PV +D A + D+S L P+V+ PH P+N +
Sbjct: 229 YDDVCRAYVEGRMTKPFAPVAADADARYAQTVEIDLSALRPVVSFPHLPENTKRVMDIAS 288
Query: 368 -VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ ID+V IGSCT G+ ED AA + +V ++P + V+ + S
Sbjct: 289 PIAIDQVVIGSCTNGRLEDMEIAASILKGHKVHERVRCIVIPGSPYVYEE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 341 KRGYLAIFMEAGAAI-STPTCGPCLGG 366
>gi|152991743|ref|YP_001357464.1| 3-isopropylmalate dehydratase large subunit [Sulfurovum sp.
NBC37-1]
gi|166989767|sp|A6Q6J8.1|LEUC_SULNB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|151423604|dbj|BAF71107.1| 3-isopropylmalate dehydratase, large subunit [Sulfurovum sp.
NBC37-1]
Length = 426
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 226/394 (57%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + K ++ G+ V V++D+++ +D+ P S F++ E K+ +
Sbjct: 4 TITEKIFSEHAGK-KVHAGEIVRVDIDMIIGNDITTPISIRAFEESGAE--KLARPDNFS 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I R+F + ++KYF+D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDIASANQAKISREFAYKHDLKYFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP T++ VL G+ +
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFGMITGGNWFKVPETIKVVLTGKSGE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL++I + V GA YK++EF G ++ L+M++R ++CNM +EAG K+G++ D
Sbjct: 171 HIYGKDIILELIRILGVDGALYKALEFTGDAIQHLAMDDRFSMCNMAIEAGAKSGIIAVD 230
Query: 310 GTTFKYL----EDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALA 362
T YL E L EP YSDE A++ D+ L P++A P P N + +
Sbjct: 231 NITEAYLIERAEANGGLRSEPKIHYSDEDATYCQVVTIDVENLSPVIAYPFLPSNGKPVE 290
Query: 363 RECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYT 419
+ K D+KID+V IGSCT G+ ED AA++ GK+V T ++ PATQK+ M
Sbjct: 291 QAVKDDLKIDQVMIGSCTNGRIEDLRIAAEIM--KGKRVAKHTRMIVTPATQKILMQAQH 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ I EAG ++P+CGACLGG
Sbjct: 349 --------EGLMDILIEAGA-VVSNPTCGACLGG 373
>gi|108804528|ref|YP_644465.1| homoaconitate hydratase family protein [Rubrobacter xylanophilus
DSM 9941]
gi|123177284|sp|Q1AVC5.1|LEUC2_RUBXD RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|108765771|gb|ABG04653.1| homoaconitate hydratase family protein [Rubrobacter xylanophilus
DSM 9941]
Length = 424
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 215/416 (51%), Gaps = 37/416 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ SE SPGD + V D++M +DV GP +F + E +V+D K+V
Sbjct: 4 TLAEKLLISHSEVDDASPGDIIMVRCDLVMANDVSGPVAF--RQMERMGVQRVFDPSKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH++ D R+ +++ +K + D++ G + G+ H L ++G
Sbjct: 62 MVSDHFMPAKDARSA---------ALQKRLKSWSDLQ--GVYYYGQGRGGIEHTVLVEDG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V+ G DSHTCT GA G F TG+G+TD L G+ +VP T++ G
Sbjct: 111 WIVPGMVIAGGDSHTCTYGALGAFGTGLGSTDIAACLAFGEFWQQVPGTIQVEFTGHKGS 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL +I +I V G +EFVG LS+++R+ + NM VEAG + G+ PAD
Sbjct: 171 FVAGKDLILAVIADIGVGGGANAVLEFVGEGAASLSLDDRLAVANMAVEAGAETGIFPAD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL+ + + P SD AS++ + + D++ LEPLVA PHSP N E + K
Sbjct: 231 EVTARYLDRRADREWHPERSDPDASYVRKVKIDLNSLEPLVALPHSPGNVVAVSEARGTK 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+VYIG+C+ G D A++ + V +VPA+QKV+ + +
Sbjct: 291 IDQVYIGNCSNGTITDLRQTAEILRGNRVHPDVRAIIVPASQKVYRQAIS--------EG 342
Query: 430 CSQIFEEAGCDTPASPSCGACLGGPKDTYA---------------RMNEPMASLCL 470
+F EAG ++P+CGAC GG A RM P+A +CL
Sbjct: 343 LIDVFVEAGA-VVSTPTCGACFGGHMGVLAEGERAITTTNRNFKGRMGSPLAEVCL 397
>gi|157164713|ref|YP_001467598.1| 3-isopropylmalate dehydratase large subunit [Campylobacter concisus
13826]
gi|171855072|sp|A7ZFP0.1|LEUC_CAMC1 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|112800608|gb|EAT97952.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter
concisus 13826]
Length = 421
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 228/390 (58%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++S G+ + +D+++ +D+ P S F++ + K+ + +
Sbjct: 4 TITEKIFSDHVGK-EVSAGEIIESKIDMIIGNDITTPISIKQFERSGAK--KLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI T D + I R+F + ++K ++D KD+G + H L ++G
Sbjct: 61 IVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMG----------IEHAILPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP +++ V G++
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPESIKVVFKGKLDK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II +I V GA YK++EF G ++ LSM++R ++CNM +EAG K+G++ D
Sbjct: 171 HVYGKDLILEIIRQIGVDGALYKALEFSGEVIDGLSMDDRFSMCNMAIEAGAKSGIIAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
T ++L+DK +L +P YSDE A + D++ L+P++A P P N R+
Sbjct: 231 EITKEFLKDK-NLRDKPKFFYSDEGAKYDKILEIDVTNLDPVIAYPFLPSNGKSVRQAVR 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+ +IGSCT G+ D AA++ GKKV T L+ PATQK+
Sbjct: 290 DDLAIDQAFIGSCTNGRLSDLRIAAQIL--KGKKVARKTRLIITPATQKI--------AR 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF EAG ++P+CGACLGG
Sbjct: 340 AAEKEGLIDIFIEAGA-VVSNPTCGACLGG 368
>gi|392408937|ref|YP_006445544.1| 3-isopropylmalate dehydratase, large subunit [Desulfomonile tiedjei
DSM 6799]
gi|390622073|gb|AFM23280.1| 3-isopropylmalate dehydratase, large subunit [Desulfomonile tiedjei
DSM 6799]
Length = 419
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 213/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + ++ + PG + VDI + +D+ P + F++ G KV+D K
Sbjct: 2 GMTITEKILAAHADMSSVEPGQLISARVDIALANDITLPLALEPFREAGG--TKVFDPAK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DH+ D + + + R+F E + +FYD+ +G + H+ L +
Sbjct: 60 VVVVLDHFNPAKDIASAQMLSKAREFARELGLIHFYDVGVMG----------IEHVLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT GA F+TG+G+TD + TGK KVP T+RFVL G+
Sbjct: 110 QGLVVPGDLVVGADSHTCTYGALAAFSTGVGSTDFAAAMLTGKCWFKVPETMRFVLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIGEI V GA YKSMEF G V LSM +R T+ NM +EAG KNG+ P
Sbjct: 170 GPWVCGKDVILHIIGEIGVDGALYKSMEFSGEGVAELSMSDRFTISNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T + + S PY SD A + D+ LEP+VA P P N E K
Sbjct: 230 FDRATKDFADVHGSRPYVVQESDPDAVYEQTKTIDLGSLEPVVALPFLPSNVRPVSEVKG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+K+D+V IGSCT G+ ED AA + G+KV + ++PAT ++ + +
Sbjct: 290 MKVDQVVIGSCTNGRIEDLRIAASIL--KGRKVAKGIRLIVIPATPQIMLQAIS------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + +AG ++P+CG CLGG
Sbjct: 342 --EGLVETILQAGGAV-STPTCGPCLGG 366
>gi|332983285|ref|YP_004464726.1| 3-isopropylmalate dehydratase large subunit [Mahella australiensis
50-1 BON]
gi|332700963|gb|AEE97904.1| 3-isopropylmalate dehydratase, large subunit [Mahella australiensis
50-1 BON]
Length = 416
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 218/397 (54%), Gaps = 21/397 (5%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVI 130
+T+KI + + ++ G + VD++ +DV P + F+K G + V+D++K+ I
Sbjct: 1 MTQKILADHAGLKEVKAGQLINAKVDLVFGNDVTAPVAVKEFEK-IGID-HVFDKDKVAI 58
Query: 131 IPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGH 190
IPDH+ D ++ ++RDF + + ++++ +G + H + ++G
Sbjct: 59 IPDHFTPNKDIKSAEQNKLIRDFARKMGLTNYFEVGRMG----------IEHALIPEKGL 108
Query: 191 CRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDY 250
G+V++G DSHTCT GA G F+TG+G+TD + G+ KVP +FVL G+ +
Sbjct: 109 VVAGDVVIGADSHTCTYGALGAFSTGVGSTDMAAAMAIGETWFKVPEAQKFVLHGKPGKW 168
Query: 251 LLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADG 310
+ KD+IL IIG I V GA Y+SMEF G ++ LSM++R ++ NM +EAG KNG+ D
Sbjct: 169 VGGKDVILHIIGMIGVDGALYQSMEFTGDGLQYLSMDDRFSMANMAIEAGAKNGIFDVDD 228
Query: 311 TTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKI 370
T Y+ + ++ PY+ +D+ A +++ Y D+S+++P VA PH P N E DV +
Sbjct: 229 KTIAYINEHSTKPYKVYKADDDAEYVAVYDIDLSQVKPTVAFPHLPSNARAIDEVGDVPL 288
Query: 371 DRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTC 430
D+V IGSCT G+ ED AA + V + PATQ +++ +
Sbjct: 289 DQVVIGSCTNGRIEDLRVAASILKGHKVHPDVRLIIFPATQAIYLQALK--------EGL 340
Query: 431 SQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+IF EAG ++P+CG CLGG A+ +A+
Sbjct: 341 IEIFVEAGAAV-STPTCGPCLGGHMGILAKGERALAT 376
>gi|167036447|ref|YP_001664025.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256751440|ref|ZP_05492318.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|320114872|ref|YP_004185031.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|226736007|sp|B0KAH5.1|LEUC_THEP3 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|166855281|gb|ABY93689.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749659|gb|EEU62685.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|319927963|gb|ADV78648.1| 3-isopropylmalate dehydratase, large subunit [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 417
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 225/402 (55%), Gaps = 27/402 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLT+KI S A ++ PG+ + V+VD+++ +DV P + F+K G + +V+D K
Sbjct: 2 GLTLTQKILS-AKVGREVKPGELIEVDVDMVLGNDVTAPVAIKEFEK-IGID-RVFDNTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++PDH++ D ++ V+I+R F + I F+++ +G + H L +
Sbjct: 59 IALVPDHFVPNKDIKSAEQVNIMRKFAKKHGIVNFFEVGQMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G +
Sbjct: 109 KGLVLPGDVVIGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ LSM++R T+ NM +EAG KNG+
Sbjct: 169 QKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSMDDRFTIANMAIEAGAKNGIFD 227
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y++ + Y+ D A + Y + ++ P VA PH P+N E
Sbjct: 228 FDEITEAYVKGRAKREYKVFERDVDAEYSEVYEISLDEIRPQVAFPHLPENTRNIDEVGK 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++
Sbjct: 288 VKIDQVVIGSCTNGRISDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +A+
Sbjct: 340 --RGYIEEFIKAGAAV-STPTCGPCLGGHMGILAKGERALAT 378
>gi|395004389|ref|ZP_10388446.1| homoaconitate hydratase family protein [Acidovorax sp. CF316]
gi|394317682|gb|EJE54190.1| homoaconitate hydratase family protein [Acidovorax sp. CF316]
Length = 425
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 207/387 (53%), Gaps = 27/387 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RAS + ++PG+ V +VD+ M HD GP E G A++WD+ ++V
Sbjct: 7 TLAQKLVARASGRTGVTPGEIVNCSVDLAMFHDSSGPRRLKPMLDELG--ARIWDKSRVV 64
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ DE + R V I RD+ EQ + + YD +G+CH+ + Q G
Sbjct: 65 LVMDHYLPERDEESRRIVRIARDWAQEQALPHVYD------------GQGICHVVVPQHG 112
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V+ TGK+ L+VP TL+ G +
Sbjct: 113 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVVVTGKIWLRVPHTLQMHWSGHLAP 172
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L +IG + G Y+++EF G V+ LSM+ERMTL NM E G + G++ D
Sbjct: 173 GVTAKDMMLHMIGRFGMNGGQYQAVEFAGPAVQALSMQERMTLSNMSAELGAQAGLIAPD 232
Query: 310 GTTFKYLED----KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
TT +L + L ++ + + L+ + F L P VA PHSP N + +
Sbjct: 233 ATTRDWLAAHGVPEADLQGLDAWTTDPGAPLTRHEFAADTLAPQVAAPHSPANTSAVGQH 292
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ID YIG+CTG K +D AAA V V + PA+Q+ D G
Sbjct: 293 AGTRIDVAYIGACTGAKLDDLRAAASVLRGQRVASGVRLMVAPASQQ---DQAAARAEG- 348
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
Q+ E+AG + + SCGAC G
Sbjct: 349 ----VLQVLEDAGAELFPT-SCGACAG 370
>gi|432330202|ref|YP_007248345.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanoregula formicicum
SMSP]
gi|432136911|gb|AGB01838.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanoregula formicicum
SMSP]
Length = 416
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 216/387 (55%), Gaps = 26/387 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+ EKIFS+ + ++ G+ V +D M HD+ GP + F + G+ KV+D ++
Sbjct: 2 AATIVEKIFSKKCGR-EIRAGEVVMAPLDGAMIHDITGPLAIQKFYEMGGK--KVFDPKR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++++ DH I A N +R F EQ+I + YDI + GVCH +
Sbjct: 59 VIMLFDHQIPADSIEAANNHVYMRKFAFEQDI-HNYDINE-----------GVCHQVTIE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++G DSHTC GA G FATGIG+TD GF L G + KVP T+R + G+
Sbjct: 107 KGRAAPGEIVVGADSHTCMYGAAGAFATGIGSTDMGFALKFGALYFKVPETIRAEVSGKF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + AKDLIL I +I GATYK++EF G TV +L M RMTLCNM +E GGK G+V
Sbjct: 167 PRRVGAKDLILAIAHDIGADGATYKAIEFTGKTVRKLDMAGRMTLCNMAIEMGGKAGIVA 226
Query: 308 ADGTTFKYLEDKTSL-PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T++Y++ + + P+E + SD A+F + +D+S LEP VA PH+ D +
Sbjct: 227 PDKVTWEYMKGRRKMKPFE-LDSDPDATFAEKRSYDVSDLEPQVAVPHNVDTGVPVSKVA 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ +V+IGSCT G+ ED AA+V K+ T ++PA++ ++ +
Sbjct: 286 GTHVHQVFIGSCTNGRFEDLKEAAEVLGKKKFSPKIRTIIIPASRDEYLKTLKAGL---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG A P CG C+GG
Sbjct: 342 ----IEKFVKAGALVEA-PCCGPCMGG 363
>gi|238927547|ref|ZP_04659307.1| 3-isopropylmalate dehydratase [Selenomonas flueggei ATCC 43531]
gi|238884829|gb|EEQ48467.1| 3-isopropylmalate dehydratase [Selenomonas flueggei ATCC 43531]
Length = 420
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 208/387 (53%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR K
Sbjct: 3 MNMSEKILARHAGLDHVEPGQLVVCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRTK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D ++ I+RDF + NI ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSAELAKIMRDFAHKHNILHYYEQGRVG----------IEHVILPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 109 RGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGIATGEAWFKVPEAINVHLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA YKS+EF G V LSM +R+T+ NM +EAG KNG+ P
Sbjct: 169 PQDISGKDVILTLIGMIGVDGALYKSLEFTGEGVASLSMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-K 366
D Y+E + + P+ PV +D A + D+S L P+V+ PH P+N +
Sbjct: 229 YDDVCRAYVEGRMTKPFAPVAADADARYAQTVEIDLSALRPVVSFPHLPENTKRVMDIGA 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ ID+V IGSCT G+ ED AA + +V ++P + V+ + S
Sbjct: 289 PIAIDQVVIGSCTNGRLEDMEIAASILKGHKVHERVRCIVIPGSPYVYEE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 341 KRGYLAIFMEAGAAI-STPTCGPCLGG 366
>gi|84489894|ref|YP_448126.1| 3-isopropylmalate dehydratase large subunit [Methanosphaera
stadtmanae DSM 3091]
gi|84373213|gb|ABC57483.1| LeuC2 [Methanosphaera stadtmanae DSM 3091]
Length = 415
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 208/385 (54%), Gaps = 23/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M ++EKI ++AS K ++SPGD + N+D+ M+HD P + +F+K KVWD EKI
Sbjct: 1 MNISEKILAKASNKEEVSPGDTITANIDVAMSHDGTSPPTIKVFEKIAD---KVWDPEKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH I + + ++R+F +Q I Y +GVCH L
Sbjct: 58 VLVFDHVIPANTIGSAEFQQVVREFGKKQKIPNMY-----------IQGEGVCHEVLPDY 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P V++G DSHTCT GAFG F+TG+G TD V TG+ VP +L+ ++G +
Sbjct: 107 GHVKPSTVIVGADSHTCTYGAFGAFSTGLGATDLAMVYATGQTWFNVPESLKINVNGTLN 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + +KD+IL+II E+ GATYKS+EF G T++ +S+ R+T+ NM +E G KNG++
Sbjct: 167 ENVYSKDVILKIIKELGAYGATYKSLEFHGDTIDNMSVASRLTMTNMAIECGAKNGIMVP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ T +YL + Y + + A + Y FD+ L+P +A PH+ DN +
Sbjct: 227 NKQTKEYLSQRGITDYTITTASKDAEYEKIYDFDVDDLQPQIACPHNVDNVEDIDKVAGT 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID+ +GSCT G+ ED L AA+V V + PA++ V+ V + K
Sbjct: 287 HIDQAVLGSCTNGRYEDLLQAAEVIEGHKIHEDVELLVFPASRHVYEKAIETGVIQTLLK 346
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ + I +P CG CLG
Sbjct: 347 SNAII---------CNPGCGPCLGA 362
>gi|94985134|ref|YP_604498.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
geothermalis DSM 11300]
gi|94555415|gb|ABF45329.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
geothermalis DSM 11300]
Length = 431
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 220/421 (52%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S + ++ PG + D ++ H++ P + + + E G + +V+D EKI
Sbjct: 3 MTIAEKILAAHSGQKEVVPGQLIECATDWVLCHEITTPAALRMLE-ERGMD-RVFDPEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ I++FYD+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVQEKGIRHFYDV----------GRGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG+ L+ DSHTC AGA G FATG+G+TD + GKV KVP T+ + GE+
Sbjct: 111 GLIKPGQTLVSGDSHTCNAGALGCFATGVGSTDLAGAIYAGKVWFKVPETMLIRVTGELQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KDL+L++I I GA Y ME+VG T+ER+ ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDLVLEVIRRIGADGANYLVMEWVGDTIERMDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TT Y+ + P Y SD A + D SK+EP VA PH P N +A + +
Sbjct: 231 DDTTRAYMAARGVTPDQYTEYTSDPDARYKVVIDLDASKVEPTVAYPHIPSNGRVAGQDR 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+ I Y+GSCT G+ D A++ G++V V +VPATQ +W
Sbjct: 291 -IPITHAYVGSCTNGRIGDLRDVARIL--KGRRVADGVQMIVVPATQAIWKQ-------- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ + +IF EAG + PSCGACLG GP D RM +P A +
Sbjct: 340 AAQEGLLEIFVEAGASV-SYPSCGACLGMHSGVLGPGDVCISSSNRNFVGRMGDPSAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|407939052|ref|YP_006854693.1| 3-isopropylmalate dehydratase large subunit [Acidovorax sp. KKS102]
gi|407896846|gb|AFU46055.1| 3-isopropylmalate dehydratase large subunit [Acidovorax sp. KKS102]
Length = 428
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 211/388 (54%), Gaps = 29/388 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RAS + +++PG+ V VD+ M HD GP +E G A++WD+ ++V
Sbjct: 10 TLAQKLVARASGRDRVTPGEIVNCRVDLAMFHDSSGPRRLKPMLEELG--AQIWDKRRVV 67
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ D+ + R V I RD+ EQ++ + YD +G+CH+ + Q G
Sbjct: 68 LVMDHYLPERDDESRRIVRIARDWAREQDLPHVYD------------GQGICHVVVPQHG 115
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V+ TG++ L+VP TL+ G++
Sbjct: 116 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVVVTGEIWLRVPHTLQMHWSGQLAA 175
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L +IG + G Y+++EF G V+ L M+ERMTL NM E G + G++ D
Sbjct: 176 GVTAKDVMLHMIGRFGMNGGQYQAVEFAGPAVQALGMQERMTLSNMSAELGAQAGLIAPD 235
Query: 310 GTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
TT +L D + ++DE A L+ + FD + L P VA PHSP N A +
Sbjct: 236 NTTRDWLRAAGVPDADLQGLDAWHTDEGAD-LTRHTFDAATLTPQVAAPHSPANAAPVAQ 294
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
ID YIG+CTG K +D AAA V V + PA+Q+ D G
Sbjct: 295 HAGQGIDVAYIGACTGAKLDDLRAAASVLRGQRVAAGVRLMVAPASQR---DQAAAQAEG 351
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
Q+ ++AG + + +CGAC G
Sbjct: 352 -----VLQVLQDAGAELFPT-TCGACAG 373
>gi|383754472|ref|YP_005433375.1| putative 3-isopropylmalate dehydratase large subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366524|dbj|BAL83352.1| putative 3-isopropylmalate dehydratase large subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 420
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 217/388 (55%), Gaps = 27/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT++EKI ++ + + G V +D+++ +D+ P S IF+ V+D EKI
Sbjct: 3 MTMSEKILAKHAGLDHVEAGQLVTCKLDMVLANDITAPPSIKIFESI---GRPVFDNEKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ I+RDF ++ I ++++ +G + H+ L ++
Sbjct: 60 ALVPDHFQPAKDIKSAELAKIVRDFAVKHKIVHYFEQGRVG----------IEHVILPEQ 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG + +G DSHTCT GA FATG+G+TD G + TG+ KVP ++ L G+
Sbjct: 110 GIVAPGMLTIGADSHTCTYGAVNGFATGVGSTDLGAAMATGEAWFKVPQAIKVELTGQKA 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL +IG I V GA YKS+EF G V+ L+M +R+T+ NM +EAGGK G+ P
Sbjct: 170 KDISGKDVILTLIGMIGVDGALYKSLEFAGEGVKSLTMTDRLTISNMAIEAGGKAGIFPY 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +Y++D+ P+EPV +DE A + + D+S L+P+VA PH P N + ++
Sbjct: 230 DEVTAEYVKDRVKKPFEPVAADEDAVYCQTVKIDLSTLKPVVAFPHLPGNTKAVEDIEEP 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ I +V IGSCT G+ ED AA++F G KV V ++P + V+ +
Sbjct: 290 IAIQQVIIGSCTNGRLEDLQIAAEIF--KGHKVADGVRCIVIPGSPAVYKEAIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +A C ++P+CG CLGG
Sbjct: 342 --RGYIDTFIDADCAV-STPTCGPCLGG 366
>gi|332296015|ref|YP_004437938.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179118|gb|AEE14807.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobium
narugense DSM 14796]
Length = 419
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 222/386 (57%), Gaps = 26/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIFS+ S+K + GD + +DI++ +D+ GP S F+K G+ KV+D++KIV
Sbjct: 4 TIAEKIFSKHSKK-DVKAGDYILAKLDIVLVNDITGPLSVMEFQK-LGD-IKVFDKDKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DH+ D ++ +NV +LR+F QNI++FY+ P + G+ H+ + + G
Sbjct: 61 IICDHFTPNKDIKSAQNVKMLRNFAKNQNIRHFYE----------PGHVGIEHVMIPELG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG +++G DSHTCT GA F+TG+G+TDAG + TG +VPP+ R + G+
Sbjct: 111 LAQPGYLIIGADSHTCTYGALNAFSTGVGSTDAGMAMATGDTWFRVPPSFRVEIRGKQKK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD++L +IG I V GA Y ++EF G + LS+++R T+ NM +E GGK G+ D
Sbjct: 171 WISGKDVVLHLIGRIGVEGANYFALEFCGEGLRNLSIDDRFTISNMAIECGGKAGIFNYD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T KYL+ V +D+ A++ D+S L+ V+ P SPDN + +
Sbjct: 231 EVTEKYLKSLGIDASNYVEADKDANYEKSITIDLSDLDYTVSLPFSPDNTINVSKLEKTY 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V IGSCT G+ D AA++ + KKVK + ++P + KV+++
Sbjct: 291 VDQVVIGSCTNGRISDLRVAAEIL--TNKKVKDGLRVIVLPGSPKVYLEALR-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F AG ++P+CG CLGG
Sbjct: 341 EGLIEKFIIAGA-AVSTPTCGPCLGG 365
>gi|288559642|ref|YP_003423128.1| homoaconitase large subunit AksD [Methanobrevibacter ruminantium
M1]
gi|288542352|gb|ADC46236.1| homoaconitase large subunit AksD [Methanobrevibacter ruminantium
M1]
Length = 417
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 215/390 (55%), Gaps = 31/390 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI S+ + ++ PG+ + + VD+ M+HD P + F+K KVWD EKI
Sbjct: 1 MNITEKILSQKAGH-EVEPGEIIEIGVDLAMSHDGTSPPAIKTFEKI---TDKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH I + + + R+F Q IK Y +G+CH L ++
Sbjct: 57 VIVFDHNIPANTIGSAEFQKVARNFIKTQGIKSHY-----------IHGEGICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH PG V++G DSHTCT GAFG F+TG+G TD V TGK VP L+ ++G +
Sbjct: 106 GHVEPGMVIVGADSHTCTYGAFGAFSTGMGATDLAMVYATGKTWFMVPEALKIEVEGSLR 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ +KDLIL IIGEI +AGATY + EF G T++ L +E RMT+ NM +E G KNG++
Sbjct: 166 PGITSKDLILNIIGEIGIAGATYNTAEFCGETIDNLDVESRMTMTNMAIEMGAKNGIMEP 225
Query: 309 DGTTFKYLEDKTSLPYEP---VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
+ T +Y+ ++T + + SD+ +++L EY F++ +E +A P+ DN +
Sbjct: 226 NKATIEYVCNRTGKSKDQLNIIKSDKDSNYLKEYLFNVDDMEAQIACPNDVDNVNPLSKV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+ ID+ +IGSCT G+ D AA V GK+V V ++PA+++++ L
Sbjct: 286 EGTHIDQGFIGSCTNGRLNDLAQAAAVL--EGKQVHDDVRLIIIPASKEIYQKAMDLGYI 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P CG CLGG
Sbjct: 344 --------KTFLDAGA-IVSNPGCGPCLGG 364
>gi|374849891|dbj|BAL52894.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[uncultured prokaryote]
Length = 426
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 209/393 (53%), Gaps = 35/393 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI + + ++ PGD V V VD +M +D+ + F+K E +V+DRE+
Sbjct: 2 GMTMAEKIIAAHAGLDRVEPGDLVEVQVDFVMANDITAALAIREFEKLGVE--EVFDRER 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ + DH++ + +A +R + + I YF ++ G+ HI L +
Sbjct: 60 VAFVADHFVPPPNIKAAEQCMTVRTWARRKGILYFEGGRE----------GGIEHIVLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE+++G DSHTCT GA G F+TG+G+TDA + TG++ LKVP T+R G +
Sbjct: 110 QGLVLPGEIIIGADSHTCTYGALGAFSTGVGSTDAAVAMATGRLWLKVPSTMRLFYHGTL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ AKDLIL IG I V GA Y +M F G ++ LSM+ R T+ NM +EAG K G++
Sbjct: 170 RPWVTAKDLILHTIGRIGVDGALYMAMFFTGPVIQSLSMDGRFTITNMAIEAGAKAGLME 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+ + P+ D A + + F++S EP+VA PH P N E D
Sbjct: 230 VDEKTLSYIRPRAKRPFTVYRDDPDARYEVDLDFNVSDWEPVVAVPHLPSNVRPVSELAD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
++ID+V+IGSCT G+ ED AA++ G++V +V + +PGS G
Sbjct: 290 IRIDQVFIGSCTNGRIEDLRLAARIL--QGRQVHP-------------EVRCIIIPGS-G 333
Query: 428 KTCSQIFEEAGCD-------TPASPSCGACLGG 453
T Q EE D PSCG C+GG
Sbjct: 334 LTYRQALEEGLIDIFVEAGAVVGLPSCGPCMGG 366
>gi|421078228|ref|ZP_15539187.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
JBW45]
gi|392523813|gb|EIW46980.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
JBW45]
Length = 417
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 223/385 (57%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI R ++K ++PG+ + VNVD +M HD+ P F++ E KVW+ +KIV
Sbjct: 4 TLTEKIIMRNTKKSSVTPGELLNVNVDRVMVHDIFAPFVVEKFREMGFE--KVWNPDKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + TS R+ I F EQ+IK + +A+ GVCH + +
Sbjct: 62 FVYDHLVPTSFIEDFRHHKIADAFAAEQHIKAVH--------RAD----GVCHQLMPELR 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ GTDSHT T GA G F+TGIG T+ + GTG++ +KVPPTL+F ++GE+P
Sbjct: 110 YVVPGQVVFGTDSHTTTYGAIGSFSTGIGYTEMAAIFGTGQLWIKVPPTLKFTINGELPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+I+G+I G TYK++EF G+T++ LS+ RMTL NM VEAG K GV+ D
Sbjct: 170 GVYSKDIILRILGDIGADGGTYKALEFGGSTIKGLSISSRMTLSNMAVEAGAKVGVIEPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF + + S ++ + SD AS+ + +D S +P+VA P + DN + K
Sbjct: 230 EKTFAFSGVEGS-QFQDLKSDPDASYEKVFNYDASTFKPVVACPSNVDNISDVEALLGTK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ ED AAK+ G+K+ T L+ PA++ ++ + + G
Sbjct: 289 IDQGFIGSCTNGRFEDLEVAAKIL--KGRKIAPFTKLIVTPASRSIYAEAAKAGIIG--- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
I EAG P+CG C G
Sbjct: 344 -----ILVEAGA-IMNPPACGLCCG 362
>gi|386002926|ref|YP_005921225.1| 3-isopropylmalate dehydratase large subunit [Methanosaeta
harundinacea 6Ac]
gi|357210982|gb|AET65602.1| 3-isopropylmalate dehydratase large subunit 2 [Methanosaeta
harundinacea 6Ac]
Length = 388
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 211/377 (55%), Gaps = 27/377 (7%)
Query: 99 MTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQN 158
M HD+ GP + F + GE+A VWD EKIVI+ DH + A N +LR F Q
Sbjct: 1 MVHDITGPLAVKGFYEIAGEDAHVWDPEKIVILFDHQVPADSLAAAENHIMLRSFAASQG 60
Query: 159 IKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG 218
I YD+ ++GVCH + ++GH PG++++G+DSHTC GA G F+TGIG
Sbjct: 61 I-LNYDV-----------FEGVCHQVMPEKGHVLPGDLIVGSDSHTCAYGALGAFSTGIG 108
Query: 219 NTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVG 278
+TD V TGK+ VP TLR +G +P + +KD+IL++IG+I GATY++ EF G
Sbjct: 109 STDMASVFATGKLWFMVPETLRLRAEGTLPRLVTSKDVILRMIGDIGADGATYQACEFAG 168
Query: 279 TTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKT-SLPYEPV-YSDEKASFL 336
+ V R+S+ ERMT+ NM +E GGK G+V D TT Y+ ++ E V + DE ASF
Sbjct: 169 SAVSRMSVPERMTMTNMAIEMGGKAGLVDPDETTLGYIRERVPDFDGERVLHGDEDASF- 227
Query: 337 SEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLAS 396
+E +++S L P VA PH+ D+ A + KID+V++GSCT G+ ED AA+V
Sbjct: 228 TERGWEVSDLPPQVAVPHNVDHVVPAGDLAGTKIDQVFLGSCTNGRFEDLALAAEVMRGE 287
Query: 397 GKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKD 456
V ++PA++ +M + F EAG SP CG C+GG
Sbjct: 288 PVARGVRMVVIPASRTEYMKALR--------AGLVEKFMEAGA-IVESPCCGPCMGG--- 335
Query: 457 TYARMNEPMASLCLHDK 473
++ + + ASL ++
Sbjct: 336 SFGLLGDGEASLSTSNR 352
>gi|78043811|ref|YP_359951.1| 3-isopropylmalate dehydratase large subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995926|gb|ABB14825.1| 3-isopropylmalate dehydratase, large subunit family protein
[Carboxydothermus hydrogenoformans Z-2901]
Length = 417
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 217/385 (56%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S+ S + G V +VD +M D P + FK+ G+ KV+D EK+V
Sbjct: 4 TIIEKILSQKSGVDAYA-GQIVVADVDYVMGQDGTAPLAIKSFKEMGGK--KVFDPEKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + +E +R ++R+F E I F+DI D GVCH + + G
Sbjct: 61 FVIDHSAPSPNEGVSRLHKLMREFRDEHGID-FHDIGD-----------GVCHQVVPESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA FATG+G+TD + +GK+ KVP T++FVL G++P
Sbjct: 109 KVGPGSLVVGADSHTCTYGALNAFATGVGSTDLAAAIISGKLWFKVPETIKFVLKGKLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ GATY + E+ G + LSM+ R T+ NM +E G K G++ AD
Sbjct: 169 GVFAKDLILYLIGDVTADGATYMAAEYTGEAISDLSMDGRFTIANMAIEMGAKAGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF ++++ + PV++D A + +D+S+LEP+VAKPH+ DN A E
Sbjct: 229 EKTFAFVKEHGGKDFTPVFADPDAVYAKVLEYDVSELEPMVAKPHTVDNTARVTEVAGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGG 427
I + +G+CT G+ ED AAK+ G+K+ T L+ PA++K+++
Sbjct: 289 IHQAVLGTCTNGRLEDLRIAAKIL--EGRKIHPRTRLIVAPASRKIFLKAME-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF EAG +P CG C+G
Sbjct: 339 EGLIKIFVEAGAAV-VTPGCGPCVG 362
>gi|350272787|ref|YP_004884095.1| 3-isopropylmalate dehydratase large subunit [Oscillibacter
valericigenes Sjm18-20]
gi|348597629|dbj|BAL01590.1| 3-isopropylmalate dehydratase large subunit [Oscillibacter
valericigenes Sjm18-20]
Length = 422
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 208/385 (54%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI +R + + PG + +D+ + +D+ P + F+ E V+D E+I
Sbjct: 3 MTMTQKILARHAGLSSVRPGQLIQAKLDLALGNDITSPVAINEFEAAGFEG--VFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A R F + ++YD+ +G + H L ++
Sbjct: 61 ALVMDHFTPNKDIKAATQCKQCRTFARRFGLTHYYDVGAMG----------IEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGE ++G DSHTCT GA G F+TG+G+TD + TG++ KVP LR L GE+
Sbjct: 111 GLVAPGEAVIGADSHTCTYGALGAFSTGVGSTDLAAAMATGELWFKVPSALRVNLMGELR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL +IG I V GA Y+S+EF G+ + LSM +R+T+ NM +EAG KNG+ P
Sbjct: 171 PYVTGKDVILTLIGLIGVDGARYQSLEFTGSGLSALSMADRLTIANMAIEAGAKNGIFPV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T YL ++ + +D A + D+ +++ VA PH P+N AR+ V
Sbjct: 231 DEITRSYLAERVDRDWTAFEADPDAEYERTIDLDLFEIDCTVAYPHLPENARPARDGHGV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
ID++ IGSCT G D AAA + V ++PATQ+V+ D +
Sbjct: 291 AIDQIVIGSCTNGTLADMAAAAGILRGRHLADGVRGIVIPATQQVYRDCIRMGY------ 344
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+++F +AGC ++P+CG CLGG
Sbjct: 345 --TEVFLDAGC-IVSTPTCGPCLGG 366
>gi|312880614|ref|ZP_07740414.1| 3-isopropylmalate dehydratase, large subunit [Aminomonas
paucivorans DSM 12260]
gi|310783905|gb|EFQ24303.1| 3-isopropylmalate dehydratase, large subunit [Aminomonas
paucivorans DSM 12260]
Length = 418
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 208/384 (54%), Gaps = 25/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+ +A+ + GD V V M+HD P + FKK G KVW + IV
Sbjct: 4 TFAEKVLGKAAGY-AVKAGDVVTVEPHFCMSHDNAAPIAR-TFKK-IGV-PKVWKPDHIV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH I + +N +R+F Q IK+FYD+ G GVCH + +EG
Sbjct: 60 FILDHAIPAPTDEHAQNHKEIREFSAAQGIKHFYDVTSKG---------GVCHQKMCEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G+DSHTCT GA+G F+TGIG ++ TGK+ +VP +++ L G
Sbjct: 111 FALPGLVMIGSDSHTCTYGAYGAFSTGIGRSEMAAAWATGKIWFRVPESIKITLTGSFQK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+IIG+I GA Y S+EF G + +S+ ERMTLCNM +E G KN V P D
Sbjct: 171 GVSAKDLILKIIGDIKADGADYMSVEFHGPGIHAMSLAERMTLCNMGIEMGAKNAVCPPD 230
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
++ K + +E +++D+ A++ E +D+ L P VAKPH+ DN A E KD
Sbjct: 231 DKVLADIQGKEKTKDWEALWADDDAAYAKELAYDLGTLVPCVAKPHTVDNYASIDEVKDT 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
I + ++GSCT + ED AA + GK+V V T ++PA+ V+ +
Sbjct: 291 PIHQAFLGSCTNARIEDLRLAAAIL--KGKQVAVRTIVIPASWVVYRQAMK--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
+F +AGC A+P CG C+G
Sbjct: 341 GLIDVFLDAGC-VLANPGCGPCMG 363
>gi|307353229|ref|YP_003894280.1| homoaconitate hydratase family protein [Methanoplanus petrolearius
DSM 11571]
gi|307156462|gb|ADN35842.1| homoaconitate hydratase family protein [Methanoplanus petrolearius
DSM 11571]
Length = 421
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 211/389 (54%), Gaps = 29/389 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFSR +S G+ V VD M HD+ GP + +F + G KV+D EKI+
Sbjct: 4 TITEKIFSRKC-GCDVSAGEMRVVPVDAAMVHDITGPLAVNMFHRMKG--GKVFDPEKII 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + A N ++R+F EQ I Y YD+K+ G+CH + G
Sbjct: 61 MIFDHQVPADSITAAENHIMMREFAKEQGI-YNYDVKE-----------GICHQVALETG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT GA G F+TGIG+TD GFVL G + ++P ++R DG+
Sbjct: 109 KIMPGDIVVGVDSHTCTYGAVGAFSTGIGSTDMGFVLRFGALYFRIPESVRIEADGKFAP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLI++ IG+I GATY++ EF G E + + RMT CNM +E GGK G+VP D
Sbjct: 169 RVGAKDLIMKTIGDIGADGATYRAAEFTGQAFEEMEIPGRMTCCNMAIEMGGKAGIVPPD 228
Query: 310 GTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
T K+L D + +DE A++ + +D+ L P VA PH+ DN E
Sbjct: 229 EKTRKWLSQWGDVDAAKAGSFDLKADEGAAYAGKVEYDVGDLVPQVAVPHNVDNVVDIDE 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ +D+V+IGSCT G+ EDF AA+V A V +PA++ ++ +
Sbjct: 289 VEGTHLDQVFIGSCTNGRYEDFAEAAEVMGARKFSPDVRVIAIPASRTEYLKCLRAGI-- 346
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 347 ------IEKFVEAGALFEA-PCCGPCMGG 368
>gi|302338125|ref|YP_003803331.1| 3-isopropylmalate dehydratase, large subunit [Spirochaeta
smaragdinae DSM 11293]
gi|301635310|gb|ADK80737.1| 3-isopropylmalate dehydratase, large subunit [Spirochaeta
smaragdinae DSM 11293]
Length = 422
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 221/388 (56%), Gaps = 29/388 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
+++EKIFSR + + ++ PG+ + ++VD+ + +D+ P + F+K G+ + DR +V
Sbjct: 6 SMSEKIFSRKAGR-RVHPGEYLMLDVDVALGNDITAPVAINEFRKAGGKKLRYPDR--VV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++PDH+ D ++ + V ++RDF EQ +K+F+++ +G + H+ L + G
Sbjct: 63 LVPDHFAPNKDIKSAQQVKLVRDFANEQGVKHFFEVGRMG----------IEHVILPEMG 112
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
R G++++G DSHTCT GA G FATG+G+TD V TGK KVP ++ L G+
Sbjct: 113 IVRSGDLVIGADSHTCTYGALGAFATGVGSTDLAGVYLTGKAWFKVPSAIQVRLTGKFRK 172
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL+L +I + V GA Y+++EF G V +SM+ R T+ NM +EAGGK G+ P D
Sbjct: 173 GVAGKDLVLYLIHILGVDGANYRAIEFTGPGVASVSMDSRFTVSNMAIEAGGKAGLFPVD 232
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KD 367
T Y E + + EP +DE A + D++ + P+VA P P N A E +
Sbjct: 233 DVTIAY-EAERGIKVEPFAADEDAVWERSIDIDLADVPPMVAYPFLPSNGKSAAEAEKEK 291
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ ED AA++ GKKV V + P +QK++
Sbjct: 292 VKIDQVVIGSCTNGRIEDLRVAAEIL--KGKKVAPSVRCIIFPGSQKIYRQAVE------ 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF +A C ++P+CG CLGG
Sbjct: 344 --EGLASIFVDAEC-AFSTPTCGPCLGG 368
>gi|256829521|ref|YP_003158249.1| 3-isopropylmalate dehydratase large subunit [Desulfomicrobium
baculatum DSM 4028]
gi|256578697|gb|ACU89833.1| 3-isopropylmalate dehydratase, large subunit [Desulfomicrobium
baculatum DSM 4028]
Length = 420
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 215/387 (55%), Gaps = 27/387 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREKI 128
TL +KI R +++P + G V V +++ +D+ P + K G K V+D++K+
Sbjct: 4 TLAQKILQRHTDQPITADGQIVQCRVSMVLANDITAPLAI---KSIRGMGVKQVFDKDKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D + V ++RDF E +I ++Y+ ++G V H L +
Sbjct: 61 ALVCDHFTPNKDIDSAEQVKVVRDFAREMDITHYYEGGNVG----------VEHAILPEY 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + G+ KVP T+R G++P
Sbjct: 111 GLVGPGDIVVGADSHTCTYGGLGAFATGLGSTDIAAAMALGETWFKVPETIRVNFTGKLP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ KDL+L IG+ VAGA YK++EF G +E LS+E RMT+ NM +EAGGK G+ A
Sbjct: 171 EHVGGKDLVLFTIGQTGVAGALYKALEFGGEIIEGLSVEARMTMANMAIEAGGKAGLFAA 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y + + P+ +DE A + E FD+S P +A PH PDN E DV
Sbjct: 231 DEKTLAYCQAHGRMGDSPIAADEGAHYWKEMTFDVSSFSPQIACPHLPDNVRPVEEVSDV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V +GSCT G+ D AAK+ G+KV V ++PA+ Y++ +
Sbjct: 291 RVDQVVLGSCTNGRISDLREAAKII--KGRKVAKGVRFIVIPASP----GAYSMALD--- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG + P+CG CLGG
Sbjct: 342 -EGLLRIFLDAGA-IISPPTCGPCLGG 366
>gi|347732695|ref|ZP_08865770.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp. A2]
gi|347518543|gb|EGY25713.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp. A2]
Length = 418
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 217/403 (53%), Gaps = 28/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI +++ + G V V + + +D+ P + F+ + KV+DR+K
Sbjct: 2 AHTLAQKILQAHTDEAITAAGRIVRCRVSLALANDITAPLAIKSFRAMGAK--KVFDRDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+ D + + V + R+F E I ++Y+ D G V H L +
Sbjct: 60 VALVMDHFTPQKDIDSAQQVKLTREFAREMGITHYYEGGDCG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT+R G +
Sbjct: 110 LGLVGPGDVVVGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGAL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ AKDLIL++IGEI V GA Y+++EF G +E LS+E RMT+ NM +EAGGK G+
Sbjct: 170 PKWVGAKDLILRLIGEIGVDGALYRALEFDGAAIEALSVEGRMTIANMAIEAGGKVGLFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y + + +D A++ E FD+S +EP+VA PH P+N E K
Sbjct: 230 ADAKTLAYTASRGRKDV-ALAADPGATYERELTFDVSGMEPVVACPHLPENVKPVGEVKG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V +D+V IGSCT G+ D AA+V G+KV V ++PAT VW +
Sbjct: 289 VTLDQVVIGSCTNGRISDMREAAEVL--KGRKVAKGVRCIVLPATPGVWKEALK------ 340
Query: 426 GGKTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F E+GC PA +CG CLGG A +A+
Sbjct: 341 --EGLIETFMESGCIVGPA--TCGPCLGGHMGILADGERAIAT 379
>gi|153815642|ref|ZP_01968310.1| hypothetical protein RUMTOR_01878 [Ruminococcus torques ATCC 27756]
gi|145847073|gb|EDK23991.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus torques
ATCC 27756]
Length = 451
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 217/399 (54%), Gaps = 35/399 (8%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G K MT+T+KI + + + G + +DI+M +D+ GP + I ++ + KV
Sbjct: 4 GVSKMGMTMTQKILAAHAGLDTVEAGQLIEAKLDIVMANDITGPMALPIIRQM---SDKV 60
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+D++K+V +PDH+ D ++ N +R++ EQ +K++++ GV H
Sbjct: 61 FDKDKVVFVPDHFTPNKDIKSAENSKAIREYAKEQGLKWYFE----------QGKSGVEH 110
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L + G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FV
Sbjct: 111 AILPEAGVVTAGECIIGADSHTCTYGALGAFSTGMGTTDVATGMATGEIWFKVPSAIKFV 170
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L G+ Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG K
Sbjct: 171 LTGKPGKYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIGNLSMDDRFTMANMAIEAGAK 230
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NG+ P D T +YL+ PY +DE A + D+SK+ P VA PH P N
Sbjct: 231 NGIFPVDEKTVEYLDAHCEKPYTVYEADEDAVYDDVVEIDLSKVRPTVAFPHLPGNAKTI 290
Query: 363 REC---KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E + VKID+V IGSCT G+ ED AA + V +VPATQK++
Sbjct: 291 DEIEAEEQVKIDQVVIGSCTNGRMEDMRKAAAILKGHTVHPDVRVMVVPATQKIY----- 345
Query: 420 LPVPGSGGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C + IF +AGC +PSCG C+GG
Sbjct: 346 --------KQCIKEGLLDIFVDAGCAVN-TPSCGPCMGG 375
>gi|237752957|ref|ZP_04583437.1| 3-isopropylmalate dehydratase large subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229375224|gb|EEO25315.1| 3-isopropylmalate dehydratase large subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 422
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 228/392 (58%), Gaps = 34/392 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
T+TEKIFS +++ ++ GD V +D+++ +D+ P S K F E+ ++ + +
Sbjct: 4 TITEKIFSEHAKR-KVYAGDIVDSPIDMVIGNDITTPLSI----KAFNESGATELANPDG 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+ DH+I D + I RDF + N+KYF+D KD+G + H L +
Sbjct: 59 FCIVMDHFIPAKDIASANQARISRDFAKQHNLKYFFDEKDMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TG+G+TD + + TG+ KVP +++ G+
Sbjct: 109 KGLVVSGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGRNWFKVPSSIKVEFIGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KDLIL+II +I V GA Y+++EF G + LSM++R +LCNM +EAG KNG++
Sbjct: 169 AKHIYGKDLILEIIRQIGVDGALYQALEFCGEGISYLSMDDRFSLCNMAIEAGAKNGIIA 228
Query: 308 ADGTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARE 364
D T ++L +++L +P +SD A++ DISKLEP+VA P P N + +++
Sbjct: 229 PDSITREFLASRSNLRAKPKEFFSDIDANYTRTLTIDISKLEPVVAYPFLPSNGKNISQA 288
Query: 365 CKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
KD +KID+ +IGSCT G+ D A+++ GKKV V + P TQ+++ D + L
Sbjct: 289 VKDNLKIDQAFIGSCTNGRLSDLKIASEIL--KGKKVHKDVRLIITPGTQQIYKDAHKLG 346
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 347 YI--------DILLDAGA-LISNPTCGACLGG 369
>gi|253827221|ref|ZP_04870106.1| 3-isopropylmalate dehydratase, large subunit [Helicobacter
canadensis MIT 98-5491]
gi|313141424|ref|ZP_07803617.1| 3-isopropylmalate dehydratase large subunit [Helicobacter
canadensis MIT 98-5491]
gi|253510627|gb|EES89286.1| 3-isopropylmalate dehydratase, large subunit [Helicobacter
canadensis MIT 98-5491]
gi|313130455|gb|EFR48072.1| 3-isopropylmalate dehydratase large subunit [Helicobacter
canadensis MIT 98-5491]
Length = 421
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 228/390 (58%), Gaps = 30/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++ G+ V +D+++ +D+ P S F++ E+ + + +
Sbjct: 4 TITEKIFSEHVGK-EVYAGEIVDCPIDMVIGNDITTPLSIKAFEQSGAES--LANPDGFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + N+K+F+D KD+G + H L ++G
Sbjct: 61 IVMDHFIPAKDIASANQAKISRDFAKKHNLKHFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G+V++G DSHTCT GA G F+TG+G+TD + + TGK K+P ++ G+
Sbjct: 111 LVVSGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKIPSAIKVEFIGKPAK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I +I V GA Y+++EF G ++ LSM++R +LCNM +EAG KNG++ +D
Sbjct: 171 HIYGKDLILEVIRQIGVDGALYQTLEFCGDGIQYLSMDDRFSLCNMAIEAGAKNGIIASD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L + L +P YSD+ A++ + DIS LEP++A P P N +++++ K
Sbjct: 231 EITREFLASRKELRAKPKEFYSDKDANYTRVLKIDISTLEPVIAYPFLPSNGKSISQALK 290
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D+KID+V+IGSCT G+ D A+++ GKKV V + P TQ+++ + Y L
Sbjct: 291 DDLKIDQVFIGSCTNGRLADLKIASEIL--KGKKVHKDVRLIVTPGTQQIYKEAYQLGYI 348
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I E+G ++P+CGACLGG
Sbjct: 349 --------DILLESGA-LISNPTCGACLGG 369
>gi|373468211|ref|ZP_09559470.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766555|gb|EHO54806.1| 3-isopropylmalate dehydratase, large subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 432
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 213/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + PG + ++D+++ +D+ P + KK E V+D K
Sbjct: 16 GMTMTQKILAAHAGLDFVEPGQLIEADLDLVLGNDITSPVAINEIKKF--EKKDVFDGGK 73
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ +N RDF + +I F+D+ +G + H L +
Sbjct: 74 IALVMDHFAPNKDIKSAQNCKTCRDFADDNSIVNFFDVGRMG----------IEHALLPE 123
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP ++F L G++
Sbjct: 124 QGLTVAGDCIIGADSHTCTYGALGAFSTGVGSTDMAVGMVTGKAWFKVPSAIKFNLKGKL 183
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA Y+SMEF G V LSM++R T+CNM +EAGGKNG+ P
Sbjct: 184 NKDVCGKDVILHIIGKIGVDGALYRSMEFAGEGVSSLSMDDRFTICNMAIEAGGKNGIFP 243
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +DE A + D+S L+P VA PH P+N D
Sbjct: 244 VDDITLDYIKEHSNRAPKIFKADEDAVYDEVIDIDLSALKPTVAFPHLPENTKEIGTFGD 303
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQK++
Sbjct: 304 IKIDQAVIGSCTNGHISDLRSAAAQM--KGKKVAKNVRCIVIPATQKIYKQAIK------ 355
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 356 --EGLVDIFIDAGA-IVSTPTCGPCLGG 380
>gi|319955993|ref|YP_004167256.1| 3-isopropylmalate dehydratase large subunit [Nitratifractor
salsuginis DSM 16511]
gi|319418397|gb|ADV45507.1| 3-isopropylmalate dehydratase, large subunit [Nitratifractor
salsuginis DSM 16511]
Length = 425
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 227/394 (57%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFS + +P + G+ V V++D+++ +D+ P S F++ + ++ + +
Sbjct: 4 TISEKIFSEHAGRP-VKAGEIVRVDIDMVIGNDITTPISIRAFEESGAK--ELANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I RDF ++ N+KYF+D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDIASANQAKISRDFALKHNLKYFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP T++ L G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDISFAIITGGNWFKVPETIKVELVGKPGP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL++I + V GA YK++EF G T++ LSM++R ++CNM +EAG KNG++ D
Sbjct: 171 HIYGKDIILEVIRILGVDGALYKALEFTGDTLKYLSMDDRFSICNMAIEAGAKNGIIAVD 230
Query: 310 GTTFKYLEDKT----SLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALA 362
T +YLE++ L EP SD A + D+ KL P++A P P N + +
Sbjct: 231 DITLEYLEERKKVNGGLRAEPKIHTSDPDAEYCQSITIDVEKLSPVIAYPFLPSNGKPVE 290
Query: 363 RECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYT 419
+ D +KID+V IGSCT G+ ED AA++ GK+V T ++ PATQ+++M
Sbjct: 291 QAVADRIKIDQVMIGSCTNGRLEDLRIAAEI--VRGKRVARHTRMIVTPATQRIFMQAEK 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ EAG ++P+CGACLGG
Sbjct: 349 --------EGLIDTLIEAGA-VVSNPTCGACLGG 373
>gi|289522539|ref|ZP_06439393.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504375|gb|EFD25539.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 418
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 214/385 (55%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S ++ GD V VD+LM HD GP + F+ EF E +VWD K+
Sbjct: 4 TIIEKIIS-GHVGEEVKAGDYCVVPVDMLMCHDATGPLAIKAFR-EF-ERERVWDPTKVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + +ER + D+LR F EQ I++F D+G +G+CH + ++G
Sbjct: 61 FVLDHATPSPNERISGLHDMLRSFAKEQGIRFF----DVG--------EGICHQLMLEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++ LGTDSHTCT GA G F+ GIG+TDA VL TGK+ LKVP T++ V++ +
Sbjct: 109 MVLPGDIALGTDSHTCTYGAVGAFSFGIGSTDASGVLLTGKLWLKVPQTMKIVVEKGLTR 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL+L IIG + GA Y +EF G+ ++ +SM RMTLCNM +EAG K G+VP D
Sbjct: 169 GVYPKDLMLHIIGILKSDGADYLCLEFSGSCIDDMSMGGRMTLCNMAIEAGAKGGIVPPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ ++S + P SD A+++ D + LEP VA PH+ DN E +
Sbjct: 229 EKTLEWVRHRSSRFFTPKLSDADANYIDVLHIDAANLEPQVAFPHAVDNVHPVDEAIGIP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+ +V+IG+CT G+ ED A + G+KV V L PA+++V ++ + S
Sbjct: 289 VQQVFIGTCTNGRLEDLKEAESIL--RGRKVNDSVRLLLCPASREVMLEAAKQGIIAS-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG T P CG C G
Sbjct: 345 ------LVEAGA-TLIPPGCGPCPG 362
>gi|237755540|ref|ZP_04584159.1| 3-isopropylmalate dehydratase, large subunit [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692303|gb|EEP61292.1| 3-isopropylmalate dehydratase, large subunit [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 431
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 218/388 (56%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + K + PG+ V V VD+ + +D+ P + +K +G + KV D K
Sbjct: 2 GMTITEKIIAAHAGKDYVEPGELVTVKVDLAIANDITAPLAIKQLEK-YGID-KVHDPNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D + + + I RDF + IK +++ +D GV H L +
Sbjct: 60 IALVMDHFFPPKDIMSAQQIKISRDFAKKMGIKNYFEGQD----------SGVMHTLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT G G F+TG+G+TD ++ TG+ L+VP +++FV +
Sbjct: 110 KGFIVPGDLVIGADSHTCTYGGIGAFSTGVGSTDIAYIWATGETWLRVPESMKFVFYNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD +L +IG+I V GA YK+ME+ G ++ L ++ R+T+ NM +EAGGK+G++
Sbjct: 170 QKWVGGKDFVLTVIGKIGVDGALYKAMEYHGEAIKALDIDNRLTIANMAIEAGGKSGIIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +++ +T ++ SD A + EY FD SK+EP+VA P P N E
Sbjct: 230 PDEKTVEWVRKRTDREFKLYKSDPDAKYCCEYEFDASKIEPVVACPSLPSNVKPVSEVAG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
ID+V+IGSCT G+ D AA + GKKV +V ++PA+ +++
Sbjct: 290 THIDQVFIGSCTNGRLSDLRIAAAIL--KGKKVHPEVRCIVIPASDQIYKQALH------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +I EAGC S +CG CLGG
Sbjct: 342 --EGIIEILAEAGCLISTS-TCGPCLGG 366
>gi|154505823|ref|ZP_02042561.1| hypothetical protein RUMGNA_03363 [Ruminococcus gnavus ATCC 29149]
gi|336432117|ref|ZP_08611957.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 2_1_58FAA]
gi|153793841|gb|EDN76261.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus gnavus
ATCC 29149]
gi|336019561|gb|EGN49285.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 425
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 216/393 (54%), Gaps = 35/393 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + +DI+M +D+ GP + I K+ + V+D+EK+
Sbjct: 3 MTMTQKILAAHAGLESVTAGQLIEAKLDIVMANDITGPMALPILKQMADQ---VFDKEKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH+ D ++ N +R+F EQ +K++++ GV H L +
Sbjct: 60 VFVPDHFTPNKDIKSAENSKAIREFAKEQGLKWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GVVTAGECIIGADSHTCTYGALGAFSTGMGTTDIATGMATGEIWFKVPAAIQFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIAHLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T YLE+ + Y+ +DE A + D+S++ P VA PH P N E +
Sbjct: 230 DEQTKAYLEEHSKKEYQIFEADEDADYEQVVTIDLSEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA + V ++PATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRKAAAILKGHTVHPDVRVMVIPATQKIY----------- 338
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C + IF +AGC +PSCG C+GG
Sbjct: 339 --KQCIKEGLLDIFVDAGCAVN-TPSCGPCMGG 368
>gi|392962046|ref|ZP_10327493.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
DSM 17108]
gi|421056099|ref|ZP_15519026.1| homoaconitate hydratase family protein [Pelosinus fermentans B4]
gi|421072923|ref|ZP_15534027.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
A11]
gi|392438515|gb|EIW16338.1| homoaconitate hydratase family protein [Pelosinus fermentans B4]
gi|392445350|gb|EIW22682.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
A11]
gi|392452804|gb|EIW29709.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
DSM 17108]
Length = 417
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI R +++ ++PG+ + VNVD +M HD+ P F++ E KVW+ +KIV
Sbjct: 4 TLTEKIIMRNTKRSSVTPGELLNVNVDRVMVHDIFAPFVVEKFREMGFE--KVWNPDKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + TS R+ I F EQ+IK + +A+ GVCH + +
Sbjct: 62 FVYDHLVPTSFIEDFRHHKIADAFAAEQHIKAVH--------RAD----GVCHQLMPELR 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ GTDSHT T GA G F+TGIG T+ + GTG++ +KVPPTL+F ++GE+P
Sbjct: 110 YVVPGQVVFGTDSHTTTYGAIGSFSTGIGYTEMAAIFGTGQLWIKVPPTLKFTINGELPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+I+G+I G TYK++EF G+T++ LS+ RMTL NM VEAG K GV+ D
Sbjct: 170 GVYSKDIILRILGDIGADGGTYKALEFGGSTIKGLSISSRMTLSNMAVEAGAKVGVIEPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF + + S ++ + SD AS+ + +D S +P+VA P + DN + K
Sbjct: 230 EKTFAFSGVEGS-QFQDLKSDPDASYEKVFNYDASTFKPVVACPSNVDNISDVEALLGSK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ ED AAK+ G+K+ T L+ PA++ ++ + + G
Sbjct: 289 IDQGFIGSCTNGRFEDLEVAAKIL--KGRKIAPFTKLIVTPASRSIYAEAAKAGIIG--- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
I EAG P+CG C G
Sbjct: 344 -----ILVEAGA-IMNPPACGLCCG 362
>gi|157736350|ref|YP_001489033.1| 3-isopropylmalate dehydratase large subunit [Arcobacter butzleri
RM4018]
gi|166987769|sp|A8EQZ0.1|LEUC_ARCB4 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|157698204|gb|ABV66364.1| 3-isopropylmalate dehydratase, large subunit [Arcobacter butzleri
RM4018]
Length = 426
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 228/394 (57%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + K ++ G+ V +D+++ +D+ P S F E G K+ + +
Sbjct: 4 TITEKIFSEHAGK-KVYAGEIVRSPIDMVIGNDITTPISIRAF--EEGGFEKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF ++ N+K F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQAKISRDFALKHNLKNFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ + G+
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVIFKGKPAP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II + V GA YK++EF G T++ LSM++R +LCNM +EAG KNG+V D
Sbjct: 171 FVTGKDLILEIIRILGVDGALYKALEFTGDTIQYLSMDDRFSLCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYL----EDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALA 362
T ++L E L EP YSDE A++ D++KLEP++A P+ P N +++
Sbjct: 231 EITKEFLDKVGEANGGLRAEPKIHYSDEDANYCQVIEIDVAKLEPVIAYPYLPSNGHSVS 290
Query: 363 RECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYT 419
+ D +K+D+V+IGSCT G+ DF AA++ +G+KV V L P TQK+ +
Sbjct: 291 QAVSDNIKVDQVFIGSCTNGRLSDFKIAAEIL--AGQKVARHVRLILTPGTQKILREATK 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
L + +AG ++P+CGACLGG
Sbjct: 349 LGYIDT--------LVDAGA-VVSNPTCGACLGG 373
>gi|315635485|ref|ZP_07890751.1| 3-isopropylmalate dehydratase large subunit [Arcobacter butzleri
JV22]
gi|315480243|gb|EFU70910.1| 3-isopropylmalate dehydratase large subunit [Arcobacter butzleri
JV22]
Length = 426
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 227/394 (57%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++ G+ V +D+++ +D+ P S F E G K+ + +
Sbjct: 4 TITEKIFSEHVGK-KVYAGEIVRSPIDMVIGNDITTPISIRAF--EEGGFEKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF ++ N+K F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQAKISRDFALKHNLKNFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ V G+
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVVFKGKPAP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II + V GA YK++EF G T++ LSM++R +LCNM +EAG KNG+V D
Sbjct: 171 FVTGKDLILEIIRILGVDGALYKALEFTGDTIQYLSMDDRFSLCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYL----EDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALA 362
T ++L E L EP YSDE A++ D++KLEP++A P+ P N +++
Sbjct: 231 EVTKEFLDKVGEANGGLRAEPKIHYSDEDANYCQVIEIDVAKLEPVIAYPYLPSNGHSVS 290
Query: 363 RECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYT 419
+ D +++D+V+IGSCT G+ DF AA++ +GKKV V L P TQK+ +
Sbjct: 291 QAVSDNIRVDQVFIGSCTNGRLSDFKMAAEIL--AGKKVARHVRLILTPGTQKILREATK 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
L + +AG ++P+CGACLGG
Sbjct: 349 LGYIDT--------LVDAGA-VVSNPTCGACLGG 373
>gi|365873266|ref|ZP_09412799.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thermanaerovibrio velox DSM
12556]
gi|363983353|gb|EHM09560.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thermanaerovibrio velox DSM
12556]
Length = 418
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 216/392 (55%), Gaps = 27/392 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+ + + ++ GD V V M+HD P + FKK G + KV+D ++IV
Sbjct: 4 TFAEKVLGKWAGY-EVKAGDVVTVEPHFCMSHDNAAPIAR-TFKK-IGVS-KVYDPKRIV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DH I + N +R+F EQ I++F D+ G GVCH + +EG
Sbjct: 60 IILDHAIPAPSDDHALNHKEIREFVREQGIEHFMDVTSQG---------GVCHQKMCEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G+DSHTCT GAFG F+TGIG ++ TGK+ +VP +++ + G P
Sbjct: 111 FALPGLIMVGSDSHTCTYGAFGAFSTGIGRSEMAATWATGKLWFRVPESMKITVTGSFPK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+IIG+I GA Y S+EF G +E +S+ ERMTLCNM +E G KN V P D
Sbjct: 171 GVSAKDLILKIIGDIKADGADYMSVEFHGPGIEAMSLAERMTLCNMGIEMGAKNAVCPPD 230
Query: 310 GTTFKYLED--KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+++ K+ L +EP+++D A + E +D+S L P VAKPH+ DN + + K
Sbjct: 231 QKVLDHVKGTAKSDL-WEPLWADRDAVYAKELSYDLSSLVPGVAKPHTVDNYSPVDQVKG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + ++GSCT G+ ED AA + G++V V T ++PA+ KV+
Sbjct: 290 TPIHQAFLGSCTNGRIEDLREAASIL--KGRQVAVRTIVIPASWKVYRQALA-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ +AGC ++P CG C+G + A
Sbjct: 340 EGIVDTLLDAGC-VISNPGCGPCMGNHQGILA 370
>gi|254457009|ref|ZP_05070437.1| 3-isopropylmalate dehydratase large subunit [Sulfurimonas
gotlandica GD1]
gi|373867370|ref|ZP_09603768.1| 3-isopropylmalate dehydratase, large subunit, prokaryotic
[Sulfurimonas gotlandica GD1]
gi|207085801|gb|EDZ63085.1| 3-isopropylmalate dehydratase large subunit [Sulfurimonas
gotlandica GD1]
gi|372469471|gb|EHP29675.1| 3-isopropylmalate dehydratase, large subunit, prokaryotic
[Sulfurimonas gotlandica GD1]
Length = 419
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 224/392 (57%), Gaps = 31/392 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+TEKIFS + ++ G+ + N+D+++ +D+ P S F E K+ + +
Sbjct: 2 AQTITEKIFSEHVGR-EVFAGEIIRSNIDMVIGNDITTPISISAFNLSGAE--KLANPDG 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+ DH+I D + I RDF + +K F+D KD+G + H L +
Sbjct: 59 FSIVLDHFIPAKDIASANQARISRDFAKKHKLKNFFDEKDMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TG+G+TD F + +G KVP +++ L G+
Sbjct: 109 KGLIVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFAMISGGNWFKVPESIKVNLSGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y KD+IL+II I V GA YK++EF G+T+E L+M++R ++CNM +EAG K+G+V
Sbjct: 169 GKYTTGKDIILEIIRMIGVDGALYKTLEFTGSTIEHLNMDDRFSMCNMAIEAGAKSGIVA 228
Query: 308 ADGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARE 364
D T ++L DK L EP YSD A+++ ++++LEP++A P P N ++ +
Sbjct: 229 YDDITKEFLADK-DLAREPKIHYSDADAAYVQVLDINVAELEPVIAYPFLPSNGHSITQA 287
Query: 365 CKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
KD +KID+ +IGSCT G+ D AA++ GKKV V + P TQK+ + Y L
Sbjct: 288 VKDKIKIDQAFIGSCTNGRLGDLKTAAEIL--DGKKVHEDVRLIVTPGTQKILKEAYRLG 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 346 Y--------MDIIIDAGG-VVSNPTCGACLGG 368
>gi|46581385|ref|YP_012193.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|387154598|ref|YP_005703534.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio vulgaris
RCH1]
gi|81566206|sp|Q726X4.1|LEUC_DESVH RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|46450807|gb|AAS97453.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235042|gb|ADP87896.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
vulgaris RCH1]
Length = 419
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 209/403 (51%), Gaps = 27/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI R +++ G V V +++ +D+ P + F+ + +V+D+++
Sbjct: 2 AHTLAQKILQRHTDEAITDAGQIVRCRVSMVLANDITAPLAIKSFRAMGAK--RVFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+ D A + V + R+F E + ++Y+ D G V H L +
Sbjct: 60 VALVMDHFTPQKDIEAAQQVKLTREFAREMGVTHYYEGGDCG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT+R G +
Sbjct: 110 LGLVGPGDVVVGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGTL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y+ AKDLIL +IG I V GA Y+++EF G +E L +E RMT+ NM +EAGGK G+
Sbjct: 170 PAYVGAKDLILTLIGAIGVDGALYRALEFDGAAIEALDVEGRMTMANMAIEAGGKAGLFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y +D A + E FD++ + P+VA PH PDN E KD
Sbjct: 230 ADAKTLTYCTTAGRTGDTAFSADAGAVYERELSFDVTGMTPVVACPHLPDNVKPVSEVKD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V + +V IGSCT G+ D AA V G+KV V ++PAT +W
Sbjct: 290 VTVQQVVIGSCTNGRIGDLREAAAVL--RGRKVSRDVRCIVLPATPGIWRQALR------ 341
Query: 426 GGKTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F EAGC PA +CG CLGG A +A+
Sbjct: 342 --EGLIETFMEAGCIVGPA--TCGPCLGGHMGILADGERAIAT 380
>gi|120601440|ref|YP_965840.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio vulgaris
DP4]
gi|166989626|sp|A1VAE7.1|LEUC_DESVV RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|120561669|gb|ABM27413.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
vulgaris DP4]
Length = 419
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 209/403 (51%), Gaps = 27/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI R +++ G V V +++ +D+ P + F+ + +V+D+++
Sbjct: 2 AHTLAQKILQRHTDEAITDAGQIVRCRVSMVLANDITAPLAIKSFRAMGAK--RVFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+ D A + V + R+F E + ++Y+ D G V H L +
Sbjct: 60 VALVMDHFTPQKDIEAAQQVKLTREFAREMGVTHYYEGGDCG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT+R G +
Sbjct: 110 LGLVGPGDVVVGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGTL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P Y+ AKDLIL +IG I V GA Y+++EF G +E L +E RMT+ NM +EAGGK G+
Sbjct: 170 PAYVGAKDLILTLIGAIGVDGALYRALEFDGAAIEALDVEGRMTMANMAIEAGGKAGLFA 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
AD T Y +D A + E FD++ + P+VA PH PDN E KD
Sbjct: 230 ADAKTLTYCTAAGRTGDAAFSADAGAVYERELSFDVTGMTPVVACPHLPDNVKPVSEVKD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V + +V IGSCT G+ D AA V G+KV V ++PAT +W
Sbjct: 290 VTVQQVVIGSCTNGRIGDLREAAAVL--RGRKVSRDVRCIVLPATPGIWRQALR------ 341
Query: 426 GGKTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F EAGC PA +CG CLGG A +A+
Sbjct: 342 --EGLIETFMEAGCIVGPA--TCGPCLGGHMGILADGERAIAT 380
>gi|421745645|ref|ZP_16183491.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus necator
HPC(L)]
gi|409775849|gb|EKN57293.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus necator
HPC(L)]
Length = 435
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 198/363 (54%), Gaps = 28/363 (7%)
Query: 60 ATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN 119
A GS+ A TL +K+ +RA+ ++PG V VD+ M+HD GP +E G
Sbjct: 4 AGAGSIP-AQTLAQKLVARAAGMDHVTPGTVVTCKVDLAMSHDSSGPRRVAPLLRELG-- 60
Query: 120 AKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKG 179
AKVWD E+ V++ DH++ +D A V RD+ EQ + + D +G
Sbjct: 61 AKVWDPERFVVVTDHFVPAADAEAEAIVRFTRDWVREQRLPHLID------------NEG 108
Query: 180 VCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTL 239
+CH+ L + G+ PG+ ++G DSH+ T GAFG + GIG T+ VL TG++ L+VP T+
Sbjct: 109 ICHVVLPERGYVLPGQFIVGGDSHSPTGGAFGAYMFGIGATEMAGVLATGEIWLRVPQTI 168
Query: 240 RFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEA 299
R DG + D + AKD++L + + + G Y+++E+ GT V LSM ERMTL NM E
Sbjct: 169 RIEWDGTLADGVCAKDIMLFLCASLGLGGGRYEAIEYAGTAVTALSMHERMTLTNMSAEL 228
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVA 351
G + G+V D TT ++LE + +P + SD A L RFD + L P VA
Sbjct: 229 GAQTGLVAPDATTLQWLE-QAGVPAATLGQIDVRHWRSDADAPVLQALRFDATTLAPQVA 287
Query: 352 KPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPA 409
PHSP N A E + ID Y+G+CTG K +D AA++ G+KV V L PA
Sbjct: 288 APHSPANGAPVTEVQGETIDVAYLGACTGAKLDDLRMAARIL--RGRKVAPGVSLQLAPA 345
Query: 410 TQK 412
+ +
Sbjct: 346 SLR 348
>gi|374301572|ref|YP_005053211.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554508|gb|EGJ51552.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 419
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 208/387 (53%), Gaps = 27/387 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA-KVWDREKI 128
TL +KI R S +P G V +++ +D+ P + F+ G A KV+D++++
Sbjct: 4 TLAQKILQRGSREPIGEAGSIARCAVSLVLANDITAPLAIKSFR---GMGARKVFDKDRV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D + V +R F E I ++Y+ D G V H L +
Sbjct: 61 ALVMDHFTPQKDIASAEQVKGVRQFAREMGITHYYEGGDCG----------VEHALLPEL 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT G G FATG+G+TD + G+ KVPPT+R G++P
Sbjct: 111 GLVGPGDIVVGADSHTCTYGGLGAFATGMGSTDIAAAMALGENWFKVPPTIRVEFSGKLP 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKDLIL +IG+I VAGA YK++EF G + L +E R+T+ NM +EAGGK G+ PA
Sbjct: 171 KNVGAKDLILFLIGQIGVAGALYKALEFGGQVIADLDVEGRLTMANMAIEAGGKAGLFPA 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y + E ++ D A + ++D+S + P VA PH P+N E K+V
Sbjct: 231 DDKTLAYCMEHGRGAAESIFPDPGAEYERVLKYDVSAMAPQVACPHLPENVKPVGEVKNV 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
+D+V IGSCT G+ D AA V G+KV V ++PAT +W S
Sbjct: 291 SVDQVVIGSCTNGRISDMRVAAAVL--KGRKVAKGVRCIIIPATPAIWRQ--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q+F +AG + P+CG CLGG
Sbjct: 341 DEGLFQVFMDAGAIV-SPPTCGPCLGG 366
>gi|384154791|ref|YP_005537606.1| 3-isopropylmalate dehydratase large subunit [Arcobacter butzleri
ED-1]
gi|345468345|dbj|BAK69796.1| 3-isopropylmalate dehydratase large subunit [Arcobacter butzleri
ED-1]
Length = 426
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 226/394 (57%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++ G+ V +D+++ +D+ P S F E G K+ + +
Sbjct: 4 TITEKIFSEHVGK-KVYAGEIVRSPIDMVIGNDITTPISIRAF--EEGGFEKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF ++ N+K F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQAKISRDFALKHNLKNFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ + G
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVIFSGRPAP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II + V GA YK++EF G T++ LSM++R +LCNM +EAG KNG+V D
Sbjct: 171 FVTGKDLILEIIRILGVDGALYKALEFTGDTIQYLSMDDRFSLCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYL----EDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALA 362
T ++L E L EP YSDE A++ D++KLEP++A P+ P N +++
Sbjct: 231 EITKEFLDKVGEANGGLRAEPKIHYSDEDANYCQVIEIDVAKLEPVIAYPYLPSNGHSVS 290
Query: 363 RECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYT 419
+ D +K+D+V+IGSCT G+ DF AA++ +G+KV V L P TQK+ +
Sbjct: 291 QAVSDNIKVDQVFIGSCTNGRLSDFKIAAEIL--AGQKVARHVRLILTPGTQKILREATK 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
L + +AG ++P+CGACLGG
Sbjct: 349 LGYIDT--------LVDAGA-VVSNPTCGACLGG 373
>gi|150390723|ref|YP_001320772.1| 3-isopropylmalate dehydratase [Alkaliphilus metalliredigens QYMF]
gi|149950585|gb|ABR49113.1| 3-isopropylmalate dehydratase [Alkaliphilus metalliredigens QYMF]
Length = 425
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 212/386 (54%), Gaps = 27/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDRE 126
M EK+ +RAS K ++ PG+ + +D+ +D+ + K F E KVWD +
Sbjct: 1 MHAIEKVLARASGKREVKPGEIIQAKIDLAEVNDL-----YLQTIKSFYEMKGTKVWDPD 55
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI I DHY +A N +R+FC EQ IK+ +D+ + GVCH +
Sbjct: 56 KITFILDHYAPAPSIQAASNQKEMREFCKEQGIKHLFDVNE-----------GVCHQVMV 104
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+EG PG +L+ TDSHT T GAFG TG+G TD ++ TG++ KVP ++ ++G+
Sbjct: 105 EEGLVWPGMILVATDSHTTTHGAFGALGTGVGATDLATIMLTGELWFKVPEVIKIEINGK 164
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ ++AKD+IL I+ ++ A YK++E+ G TV +S+ ERM +CNM VE G K +
Sbjct: 165 LKSGVMAKDVILHILSKLGTDAAVYKAIEYTGETVAEMSIAERMVICNMAVEMGAKTSYI 224
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D Y++++T +E + +D+ + + Y F++ L+P VA PHS DN + K
Sbjct: 225 QPDEKIIAYVKERTGKTFEILKTDDDYEYAASYTFNVEDLKPQVALPHSVDNGVDIDKIK 284
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+VK+D+V+IG+CTGG+ ED AA++ + ++PA+++V L
Sbjct: 285 EVKVDQVFIGTCTGGRLEDIEVAARIIKNNKIHRDTRLLVIPASKEV------LEKAIEK 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
G + I +AG T SP CG CLG
Sbjct: 339 GYMTTLI--KAGA-TFTSPGCGPCLG 361
>gi|88603606|ref|YP_503784.1| homoaconitate hydratase [Methanospirillum hungatei JF-1]
gi|88189068|gb|ABD42065.1| 3-isopropylmalate dehydratase, large subunit [Methanospirillum
hungatei JF-1]
Length = 417
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 211/386 (54%), Gaps = 24/386 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+TEKIFS K +++ G+ V + M HD+ GP + F + GE KV+D K
Sbjct: 2 AGTITEKIFSARCGK-EVTAGEVVMAPISGAMIHDITGPLAIEKFYEMGGE--KVFDPAK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+++ DH + A N +R F EQ I Y YDIK+ GVCH +
Sbjct: 59 IIMLFDHQVPADSLNAAENQKNMRIFAKEQGI-YNYDIKE-----------GVCHQVTLE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G+DSHTC GA G FATG+G+TD GF L G + +VP ++R + G
Sbjct: 107 KGRVSPGDIVIGSDSHTCMYGAVGAFATGVGSTDMGFALRYGCLYFRVPESIRAHVTGRF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + AKDLIL II +I+V GATYK++EF G T+E L+M RMT CNM +E GGK G+VP
Sbjct: 167 QERVGAKDLILNIIKDITVDGATYKTVEFTGDTIESLNMAGRMTCCNMAIEMGGKAGIVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL + + E + SD A + S +D+S L P VA PH+ D E
Sbjct: 227 PDQVTKEYLSGRGTWREENLASDPDAVYASWRDYDVSDLVPQVAVPHNVDQVVDVTEIAG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V+IGSCT G+ ED AA V V ++PA++ ++ +
Sbjct: 287 THVDQVFIGSCTNGRFEDLKEAALVLGDRKFSDDVRVLVIPASKTEYLKALRAGL----- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG A P CG C+GG
Sbjct: 342 ---IEQFVQAGALVEA-PCCGPCMGG 363
>gi|317502431|ref|ZP_07960595.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331090307|ref|ZP_08339191.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336440686|ref|ZP_08620265.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896169|gb|EFV18276.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330401442|gb|EGG81027.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336012369|gb|EGN42288.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 444
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 215/393 (54%), Gaps = 35/393 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +DI+M +D+ GP + I ++ + KV+D++K+
Sbjct: 3 MTMTQKILAAHAGLDTVEAGQLIEAKLDIVMANDITGPMALPIIRQM---SDKVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH+ D ++ N +R++ EQ +K++++ GV H L +
Sbjct: 60 VFVPDHFTPNKDIKSAENSKAIREYAKEQGLKWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GVVTAGECIIGADSHTCTYGALGAFSTGMGTTDVATGMATGEIWFKVPSAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIGNLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--- 365
D T +YL+ PY +DE A + D+SK+ P VA PH P N E
Sbjct: 230 DEKTVEYLDAHCEKPYTVYEADEDAVYDDVVEIDLSKVRPTVAFPHLPGNAKTIDEIEAE 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ VKID+V IGSCT G+ ED AA + V +VPATQK++
Sbjct: 290 EQVKIDQVVIGSCTNGRMEDMRKAAAILKGHTVHPDVRVMVVPATQKIY----------- 338
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C + IF +AGC +PSCG C+GG
Sbjct: 339 --KQCIKEGLLDIFVDAGCAVN-TPSCGPCMGG 368
>gi|363899326|ref|ZP_09325836.1| 3-isopropylmalate dehydratase large subunit [Oribacterium sp. ACB1]
gi|395209314|ref|ZP_10398408.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp.
ACB8]
gi|361959163|gb|EHL12459.1| 3-isopropylmalate dehydratase large subunit [Oribacterium sp. ACB1]
gi|394704945|gb|EJF12474.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp.
ACB8]
Length = 421
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI ++ + ++ G + VD++ +D+ P I ++E + V+D++K
Sbjct: 2 GMTMSQKILAKHAGLEKVESGQLILAKVDLVHGNDITTP--VAIREREKIQGIGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V + DH++ D + + I R++ E +K++YD+ ++G + H + +
Sbjct: 60 VVFVMDHFVPNKDITSAKCTQICRNYAKENGLKHYYDVGNMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE+ +G DSHTCT GA G F+TG+G+TD + TG++ KVP ++ +L G++
Sbjct: 110 QGLITAGELSVGADSHTCTYGALGAFSTGVGSTDMAAAMATGELWFKVPNAIQVILKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL +IG+I V GA Y+S+EF G V LSM++R +CNM +EAGGKNG+ P
Sbjct: 170 QKYVSGKDVILHLIGKIGVDGALYESIEFSGEGVSSLSMDDRFAICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + PY +D A + D+S L+ VA PH P+N
Sbjct: 230 VDEKTIEYMKAHGNKPYTVYEADSDAKYERVIEIDLSTLQSTVAFPHLPENTHEIGTFDK 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ D +A++ + ++PATQK++++
Sbjct: 290 IPIDQVVIGSCTNGRLSDIAVSAELLRGRHVAENLRCIVIPATQKIYLEAME-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
K + EAG ++P+CG CLGG
Sbjct: 342 KGYIKDLIEAGA-VVSTPTCGPCLGG 366
>gi|238920065|ref|YP_002933580.1| 3-isopropylmalate dehydratase, large subunit [Edwardsiella ictaluri
93-146]
gi|238869634|gb|ACR69345.1| 3-isopropylmalate dehydratase, large subunit [Edwardsiella ictaluri
93-146]
Length = 421
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 210/390 (53%), Gaps = 34/390 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + + +++ GD VWV+VD M D+ GP I ++ + RE++V
Sbjct: 4 TVAEKILAAKAGLTEVTAGDVVWVDVDKAMMDDILGP-RVQIAEQLESLKMPIRHRERVV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DHY ++ R V RD+ EQ I +Y+ ++G CH +A++G
Sbjct: 63 VIADHYTPPANARQAEIVKFTRDWSAEQGIDRYYE------------FQGPCHQIMAEQG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG ++LGTDSHTC GA G FATG+G+T+ +L TGK LKVP + R G +P
Sbjct: 111 HVLPGTLILGTDSHTCMGGALGAFATGVGSTEMVGILATGKTWLKVPESQRVEWSGPLPP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++AKD+ L+ IG I AGATY+++EF G+T + +++RM + NM VE G K G++ D
Sbjct: 171 GVMAKDIALKTIGHIGHAGATYQAVEFCGSTFADMPIDQRMAIANMAVEMGAKAGLMSVD 230
Query: 310 GTTFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
T YL + Y P D+ A ++ + RF L P +A PH+ DN
Sbjct: 231 ALTEAYLAAQGIGRDAYTVYPP---DDDAIYVRQLRFAAPALAPQIACPHNVDNVTDIDN 287
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
+ID+ Y+GSCTGG+ D AAA + GK++ V + PA+Q++W
Sbjct: 288 VAGTRIDQAYLGSCTGGRYSDLAAAADLL--RGKRIARGVRLLVSPASQQIWQQA----- 340
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
S SQ+ EAG T +P+CG C+G
Sbjct: 341 --SRSGILSQL-AEAGA-TILAPTCGVCVG 366
>gi|419720243|ref|ZP_14247486.1| 3-isopropylmalate dehydratase, large subunit [Lachnoanaerobaculum
saburreum F0468]
gi|383303611|gb|EIC95053.1| 3-isopropylmalate dehydratase, large subunit [Lachnoanaerobaculum
saburreum F0468]
Length = 418
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 212/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + PG + ++D+++ +D+ P + KK E V+D K
Sbjct: 2 GMTMTQKILAAHAGLDFVEPGQLIEADLDLVLGNDITSPVAINELKKF--EKKDVFDSTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ +N RDF + +I F+D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAQNCKTCRDFADDNSIINFFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G +
Sbjct: 110 QGLTVAGDCIIGADSHTCTYGALGAFSTGVGSTDMAVGMVTGRAWFKVPSAVKFNLKGRL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA Y+SMEF G V LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 NKDVCGKDVILHIIGKIGVDGALYRSMEFAGEGVSSLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +DE A + D+S L+P VA PH P+N D
Sbjct: 230 VDDITLDYMKEHSNRSPKIFKADEDAVYDEVIDIDLSMLKPTVAFPHLPENTKEIGTFDD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQ+++
Sbjct: 290 IKIDQAVIGSCTNGHISDLRSAATQM--KGKKVAKNVRCIVIPATQEIYKQAIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLVDIFIDAGA-IVSTPTCGPCLGG 366
>gi|335045989|ref|ZP_08539012.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333759775|gb|EGL37332.1| 3-isopropylmalate dehydratase, large subunit [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 421
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI ++ + ++ G + VD++ +D+ P I ++E + V+D++K
Sbjct: 2 GMTMSQKILAKHAGLEKVESGQLILAKVDLVHGNDITTP--VAIREREKIQGKGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V + DH++ D + + I R++ E +K++YD+ ++G + H + +
Sbjct: 60 VVFVMDHFVPNKDITSAKCTQICRNYAKENGLKHYYDVGNMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE+ +G DSHTCT GA G F+TG+G+TD + TG++ KVP ++ +L G++
Sbjct: 110 QGLITAGELSVGADSHTCTYGALGAFSTGVGSTDMAAAMATGELWFKVPNAIQVILKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL +IG+I V GA Y+S+EF G V LSM++R +CNM +EAGGKNG+ P
Sbjct: 170 QKYVSGKDVILHLIGKIGVDGALYESIEFSGEGVSFLSMDDRFAICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + PY +D A + D+S L+ VA PH P+N
Sbjct: 230 VDEKTIEYIKAHGNKPYTVYEADSDAKYERVIEIDLSTLQSTVAFPHLPENTHEIGTFDK 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ D +A++ + ++PATQK++++
Sbjct: 290 ISIDQVVIGSCTNGRLSDIAVSAELLRGRHVAENLRCIVIPATQKIYLEAME-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
K + EAG ++P+CG CLGG
Sbjct: 342 KGYIKDLIEAGA-VVSTPTCGPCLGG 366
>gi|325282803|ref|YP_004255344.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
proteolyticus MRP]
gi|324314612|gb|ADY25727.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
proteolyticus MRP]
Length = 427
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 219/421 (52%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + K ++PG+ + D+++ H++ P + + + E G + +V+D EKI
Sbjct: 3 MTIAEKILAAHAGKDAVTPGELLECTTDLVLCHEITTPAALRMLE-ERGMD-RVFDPEKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ I++FYD+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAQMYQKLKSWVHEKGIRHFYDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG+ L+ DSHTC GA G FATG+G+TD + G+V KVP T+ + GE
Sbjct: 111 GLLKPGQTLVSGDSHTCNGGALGAFATGVGSTDLAGAIYAGRVWFKVPETMLIRVTGEAG 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD++L++I +I GA Y ME+VG ++ L ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDIVLEVIRQIGADGANYMVMEWVGDYIDNLDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
DGTT +YL + P Y SD A + D S++EP VA PH P N +A
Sbjct: 231 DGTTREYLRVRGVEPGEYTEYRSDPDAQYRVVLDIDASQVEPTVAYPHIPSNGRVA-GSD 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+ + Y+GSCT G+ D A++ G++V V +VPATQ VW
Sbjct: 290 AIAVTHAYVGSCTNGRISDLREVARIL--RGRRVADGVQMTIVPATQAVWKQAAV----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ +IF +AG T + PSCGACLG GP D RM +P A +
Sbjct: 343 ---EGLMEIFVDAGA-TVSYPSCGACLGMHTGVLGPNDVCISSSNRNFVGRMGDPTAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|315652008|ref|ZP_07905009.1| 3-isopropylmalate dehydratase large subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315485655|gb|EFU76036.1| 3-isopropylmalate dehydratase large subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 418
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 212/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + + + PG + ++D+++ +D+ P + KK E V+D K
Sbjct: 2 GMTMTQKILAAHAGLDFVEPGQLIEADLDLVLGNDITSPVAINELKKF--EKKDVFDSTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D ++ +N RDF + +I F+D+ +G + H L +
Sbjct: 60 IALVMDHFAPNKDIKSAQNCKTCRDFADDNSIINFFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G +
Sbjct: 110 QGLTVAGDCIIGADSHTCTYGALGAFSTGVGSTDMAVGMVTGRAWFKVPSAVKFNLKGRL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+IL IIG+I V GA Y+SMEF G V LSM++R T+CNM +EAGGKNG+ P
Sbjct: 170 NKDVCGKDVILHIIGKIGVDGALYRSMEFAGEGVSSLSMDDRFTICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+++ ++ + +DE A + D+S L+P VA PH P+N D
Sbjct: 230 VDDITLDYMKEHSNRGPKIFKADEDAVYDEVIDIDLSTLKPTVAFPHLPENTKEIGTFSD 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+ IGSCT G D +AA GKKV V ++PATQ+++
Sbjct: 290 IKIDQAVIGSCTNGHISDLRSAATQM--KGKKVAKNVRCIVIPATQEIYKQAIK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --EGLVDIFIDAGA-IVSTPTCGPCLGG 366
>gi|154148626|ref|YP_001405737.1| 3-isopropylmalate dehydratase large subunit [Campylobacter hominis
ATCC BAA-381]
gi|166989620|sp|A7HZP6.1|LEUC_CAMHC RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|153804635|gb|ABS51642.1| 3-isopropylmalate dehydratase, large subunit [Campylobacter hominis
ATCC BAA-381]
Length = 419
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 225/390 (57%), Gaps = 32/390 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS Q+ G+ V +D+++ +D+ P S F+K A + + +
Sbjct: 4 TITEKIFSD-HVGAQVYAGEIVESKIDMVIGNDITTPISIRQFEKSGA--AHLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI T D + I R+F + N+K F+D KD+G + H + ++G
Sbjct: 61 IVMDHYIPTKDIASANQAKISREFAYKHNLKNFFDEKDIG----------IEHALIPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP +++ VL G + +
Sbjct: 111 LVVSGDVIIGADSHTCTHGALGAFSTGMGSTDIAYAMITGKNWFKVPKSIKVVLKGRLGE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I I V GA YK++EF G ++ + M+ R ++CNM +EAG K+G++ AD
Sbjct: 171 HIYGKDLILKLISMIGVDGALYKALEFCG-DIQNIDMDSRFSMCNMAIEAGAKSGIIAAD 229
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++ +DK +L EP YSDE A + D+S LEP+VA P P N + + +
Sbjct: 230 EITKQFFKDK-NLRAEPKYFYSDEDAFYERTVEIDMSALEPMVAYPFLPSNGKTITQAVA 288
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D +KID+ +IGSCT G+ D AA++ GKKV T L+ PATQK++
Sbjct: 289 DELKIDQAFIGSCTNGRLSDLRIAAEIL--KGKKVAKKTRLIITPATQKIY--------K 338
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF +AG ++P+CGACLGG
Sbjct: 339 AAEHEGLIDIFIDAGA-VVSNPTCGACLGG 367
>gi|390941629|ref|YP_006405366.1| 3-isopropylmalate dehydratase large subunit [Sulfurospirillum
barnesii SES-3]
gi|390194736|gb|AFL69791.1| 3-isopropylmalate dehydratase, large subunit [Sulfurospirillum
barnesii SES-3]
Length = 421
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 223/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS P + G+ V +D+++ +D+ P S F++ D IV
Sbjct: 4 TITEKIFSDHVGHPVFA-GEIVKSKIDMVIGNDITTPISIRAFEESGATTLANPDGFSIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DHYI D + I R+F + ++K+++D KD+G + H L ++G
Sbjct: 63 M--DHYIPAKDIASANQAKISREFAYKHDLKHYFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G FATG+G+TD F + TG+ KVP +++ V G+
Sbjct: 111 LIVPGDVIIGADSHTCTHGALGAFATGMGSTDLAFAMITGENWFKVPESIKVVFSGKPKK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I + V GA Y+++EF G T+ LSM++R +LCNM +EAG K+G+V D
Sbjct: 171 HVYGKDLILEVIRLLGVDGALYRALEFTGDTIAHLSMDDRFSLCNMAIEAGAKSGIVAVD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T +L DK SL E YSD A+++ D++ L+P++A P P N +++ + +
Sbjct: 231 DITKAFLNDK-SLAREAKFFYSDADATYVQVLHIDVANLDPVIAYPFLPSNGKSINQAVQ 289
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
D+ ID+V+IGSCT G+ ED AA + G+KV T L+ PATQK+ +
Sbjct: 290 DDLTIDQVFIGSCTNGRLEDLRIAASIL--KGRKVARKTRLIITPATQKISLQAQK---- 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CGACLGG
Sbjct: 344 ----EGLVDIFVEAGA-VFSNPTCGACLGG 368
>gi|307722002|ref|YP_003893142.1| 3-isopropylmalate dehydratase large subunit [Sulfurimonas
autotrophica DSM 16294]
gi|306980095|gb|ADN10130.1| 3-isopropylmalate dehydratase, large subunit [Sulfurimonas
autotrophica DSM 16294]
Length = 419
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 222/390 (56%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS+ + + G+ + ++D+++ +D+ P S F++ + D IV
Sbjct: 4 TITEKIFSQHVGR-DVKAGEIIRCDIDMVIGNDITTPISIKAFEESGAQTLANPDGFSIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH+I D + I RDF + +K ++D KD+G + H L ++G
Sbjct: 63 L--DHFIPAKDIASANQARISRDFAKKHQLKNYFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + +G KVP +++ VL G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFAMISGGNWFKVPESIKVVLSGKPGK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y KD+IL+II I V GA YK++EF G+TVE L+M++R ++CNM +EAG KNG+V D
Sbjct: 171 YTTGKDIILEIIRMIGVDGALYKTLEFTGSTVEHLTMDDRFSMCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L DK L EP YSDE A ++ D++ L+P++A P P N ++ + K
Sbjct: 231 DITAEFLADK-DLAREPRIHYSDEDAQYVQVLEIDVANLDPVIAYPFLPSNGHSVNQAVK 289
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D +K+D+ +IGSCT G+ D AA++ G+KV V + P TQK+ D L
Sbjct: 290 DEIKVDQAFIGSCTNGRLADLKVAAEIL--KGQKVHPDVRLIVTPGTQKILRDANHLGY- 346
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 347 -------IDIIVDAGG-VVSNPTCGACLGG 368
>gi|334129015|ref|ZP_08502890.1| 3-isopropylmalate dehydratase large subunit [Centipeda periodontii
DSM 2778]
gi|333385749|gb|EGK56976.1| 3-isopropylmalate dehydratase large subunit [Centipeda periodontii
DSM 2778]
Length = 420
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 215/388 (55%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR
Sbjct: 2 GMNMSEKILARHAGLDHVEPGQLVTCQLDMVLANDVTGPPSI----KEFEKTGRPVFDRT 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI +IPDH+ D +++ I+RDF + NI ++Y+ +G + H+ L
Sbjct: 58 KIALIPDHFQPAKDIKSSELAKIMRDFARKHNILHYYEQGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAGGKNG+
Sbjct: 168 KPADISGKDVILTLIGMIGVDGALYQSLEFTGEGVADLTMTDRLTIANMAIEAGGKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D +Y+E + + +E V D A + ++S+L P+V+ PH P+N +
Sbjct: 228 PYDDVCKEYVEGRMTGAFESVNPDPDAQYARTVEINLSELRPVVSFPHLPENTKRVMDIP 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ ++ID+V IGSCT G+ ED AA++ +V ++P + V+ + S
Sbjct: 288 EPIEIDQVVIGSCTNGRLEDMEIAAEILKGHTVHERVRCIIIPGSPWVYRE--------S 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG ++P+CG CLGG
Sbjct: 340 MRRGYLEIFMDAGAAV-STPTCGPCLGG 366
>gi|410457501|ref|ZP_11311296.1| 3-isopropylmalate dehydratase [Bacillus azotoformans LMG 9581]
gi|409934254|gb|EKN71167.1| 3-isopropylmalate dehydratase [Bacillus azotoformans LMG 9581]
Length = 415
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 211/388 (54%), Gaps = 33/388 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S + K +S V+VD++M D P + FK+ G N VWD K+V
Sbjct: 4 TMIEKIISSHAGK-DISQNQIAIVDVDMVMASDTTAPLTIKSFKEMGGIN--VWDCSKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH +ER ++RDF +Q+I YD D G+CH + +
Sbjct: 61 FVIDHAAPAPNERIANLHSLMRDFAKKQSI-ILYDAGD-----------GICHQLMVENQ 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H +PG+++LG DSHTCT GA G FATG+G+TD VL TGK +KVP T++ L+G +
Sbjct: 109 HVKPGQLVLGADSHTCTYGALGAFATGVGSTDLAAVLLTGKTWIKVPETIKIQLNGTLQP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL I+G + + GATYK++EF G ++ LS++ R+T+ NM +E G K G V +
Sbjct: 169 GVSAKDLILFIVGHLGIDGATYKAIEFTGEAIKELSLDSRLTIANMAIEMGAKAGFVDTN 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
G Y +E + +D+ A + S + FD+S+LEP VA PHSPDN E + V
Sbjct: 229 GLKLPY-------DFENIKADDDAIYDSVHVFDVSQLEPQVAIPHSPDNVKPITEVEGVA 281
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I++ ++GSCT G+ ED AAK+ GKK+ ++ A MDV+ V +T
Sbjct: 282 INQAFLGSCTNGRLEDLHEAAKIL--KGKKIHPNVRMIIAAAS--MDVHIKAVQDGTAET 337
Query: 430 CSQ---IFEEAGCDTPASPSCGACLGGP 454
+ F +GC P G LG P
Sbjct: 338 LMRSGATFLPSGC----GPCVGTHLGVP 361
>gi|390933686|ref|YP_006391191.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569187|gb|AFK85592.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 418
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 227/404 (56%), Gaps = 31/404 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDR 125
+TLT+KI + + ++ PGD + ++VD+++ +DV P + KEF + +V+D+
Sbjct: 2 GLTLTQKILANKAGY-EVKPGDLIEIDVDMVLGNDVTSPVAI----KEFLKIGVKEVFDK 56
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
EKI ++PDH++ D ++ V+I+R F E I F+++ +G + H L
Sbjct: 57 EKIALVPDHFVPNKDIKSAEQVNIVRKFAKEYGIVNFFEVGQMG----------IEHALL 106
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G PG+V++G DSHTCT GA F+TGIG+TD + TGK KVP ++F L G
Sbjct: 107 PEKGLVLPGDVVIGADSHTCTYGAITCFSTGIGSTDMACAMATGKAWFKVPEAIKFNLKG 166
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++ ++ KD+IL IIG I V GA YKSMEF G + LS+++R T+ NM +EAG KNG+
Sbjct: 167 KLNKWVSGKDVILYIIGMIGVDGALYKSMEFTG-DISSLSIDDRFTIANMAIEAGAKNGI 225
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T Y+ + Y+ +D+ A ++ Y D+S ++P VA PH P+N +
Sbjct: 226 FDYDEITEAYVLGRVKRNYKVFKADDDAEYVKTYDIDLSAIKPQVAFPHLPENTKSIDDV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+KID+V IGSCT G+ +D ++ GKKV V + PATQ ++++
Sbjct: 286 GSIKIDQVVIGSCTNGRLQDMEVTYEIL--KGKKVHPDVRLIIFPATQDIYLECVR---- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +++
Sbjct: 340 ----RGYIEEFIKAGA-AVSTPTCGPCLGGHMGILAKGERAIST 378
>gi|242279055|ref|YP_002991184.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
salexigens DSM 2638]
gi|242121949|gb|ACS79645.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
salexigens DSM 2638]
Length = 419
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 209/385 (54%), Gaps = 23/385 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI +++ PG V NV +++ +D+ P + F+ + +V+D++K+
Sbjct: 4 TLAEKILQAHTDETVKEPGQIVRCNVSMVLANDITAPLAIKSFRAMGAD--QVFDKDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V ++RDF E+NI ++Y+ ++G V H L + G
Sbjct: 62 LVCDHFTPNKDIDSAEQVKVVRDFAHEKNITHYYEGGEVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
P ++++G DSHTCT G G FATG+G+TD + G+ KVPPT++ ++G
Sbjct: 112 LVGPSDIVIGADSHTCTYGGLGAFATGMGSTDIAGGMALGETWFKVPPTIKVEIEGTPGK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ AKD IL +IG I V+GA YK++EF G+ VE LS+E RMT+ NM +EAGGK G+ P D
Sbjct: 172 YMGAKDYILNLIGTIGVSGALYKALEFSGSVVENLSIEGRMTIANMAIEAGGKVGLFPVD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + +DE AS+ + D++ ++P VA PH PDN E KD++
Sbjct: 232 AKTLEYCKAAGRTGDVEMRADEGASYERVVKIDVTGMKPQVACPHLPDNVKPVDEVKDMR 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + IGSCT G+ ED AA + V ++PAT +W +
Sbjct: 292 IHQAVIGSCTNGRIEDLREAAAILKGRKADKNVRLIVLPATPNIWKQALR--------EG 343
Query: 430 CSQIFEEAGCDT-PASPSCGACLGG 453
+ F E+G PA +CG CLGG
Sbjct: 344 LIETFMESGAIVGPA--TCGPCLGG 366
>gi|386856285|ref|YP_006260462.1| 3-isopropylmalate dehydratase large subunit [Deinococcus gobiensis
I-0]
gi|379999814|gb|AFD25004.1| 3-isopropylmalate dehydratase large subunit [Deinococcus gobiensis
I-0]
Length = 431
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 216/421 (51%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S + PG + D ++ H++ P + + + E G + KV+D +I
Sbjct: 3 MTIAEKILAAHSGHDHVVPGQLIECATDWVLCHEITTPAALRMLE-ERGMD-KVFDPSRI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ +K+F+D+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVQEKGVKHFFDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+ L+ DSHTC AGA G FATG+G+TD + GKV K+P T+ + GEM
Sbjct: 111 GLVNPGQTLVSGDSHTCNAGALGMFATGVGSTDLAGAIYAGKVWFKIPETMLIRVTGEMQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD++L++I I GA Y ME+VG T++R+ ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDIVLEVIKRIGADGANYMVMEWVGDTIDRMDMEGRFTLTNMAIEAGGKTGIVGV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TT +YL D+ P Y SD A + D + +EP VA PH P N +A +
Sbjct: 231 DDTTRQYLRDRGVEPGSYTEYASDPDAKYKVVVEIDAAAVEPTVAYPHIPSNGRVAGSDR 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+ + Y+GSCT G+ D A++ G+KV V +VPATQ +W
Sbjct: 291 -IAVTHAYVGSCTNGRIGDLRDVARIL--KGRKVADGVQMIVVPATQAIWKQ-------- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ + +IF +AG + PSCGACLG GP D RM +P A +
Sbjct: 340 AAQEGLMEIFVDAGASV-SYPSCGACLGMHSGVLGPDDVCISSSNRNFVGRMGDPSAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|164687497|ref|ZP_02211525.1| hypothetical protein CLOBAR_01138 [Clostridium bartlettii DSM
16795]
gi|164603271|gb|EDQ96736.1| 3-isopropylmalate dehydratase, large subunit [Clostridium
bartlettii DSM 16795]
Length = 429
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 217/393 (55%), Gaps = 30/393 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ + ++ G + N+D+++ +D+ P + F K G + KV+D+ K
Sbjct: 2 GMTMTQKILAKHAGMNEVKKGQLIEANLDLVLGNDITTPVAITEFNK-LGID-KVFDKTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ I+ DH+ D ++ + R F + + ++D+ +G + H L +
Sbjct: 60 VTIVCDHFTPNKDIKSAEQCKVARTFARGKEVINYFDVGQMG----------IEHCLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G G+V++G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL +
Sbjct: 110 KGLVTCGDVVIGADSHTCTYGALGAFSTGIGSTDMAAGMATGKAWFKVPGAIKFVLKNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIGEI V GA Y SMEF G V+ LSM++R T+CNM +EAG KNG+ P
Sbjct: 170 AKWISGKDIILHIIGEIGVDGARYMSMEFAGDGVQYLSMDDRFTICNMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLED---KTSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
D T +Y+E KT VY +DE A + D+S+L+P VA PH P+N
Sbjct: 230 VDEKTKEYMEAHPCKTIEKNPTVYEADEDAEYDRVIEIDLSELKPTVAFPHLPENTKTTD 289
Query: 364 EC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTL 420
E +D+KID+V IGSCT G+ ED AA++ GKKV V + P TQ ++++
Sbjct: 290 EITEDIKIDQVVIGSCTNGRIEDMRIAAEIM--RGKKVADDVRCIVFPGTQAIYLEAI-- 345
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
G + A T P+CG CLGG
Sbjct: 346 ----EKGYITDMVLAGAAIST---PTCGPCLGG 371
>gi|121608874|ref|YP_996681.1| 3-isopropylmalate dehydratase large subunit [Verminephrobacter
eiseniae EF01-2]
gi|121553514|gb|ABM57663.1| 3-isopropylmalate dehydratase, large subunit [Verminephrobacter
eiseniae EF01-2]
Length = 428
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 214/389 (55%), Gaps = 30/389 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ +RAS + ++ G+ V +VD+ M HD GP + G A+VWDR +
Sbjct: 11 ARTLAQKLLARASGRAHVAVGEIVTCSVDLAMFHDSSGPRRLQPMLQALG--AQVWDRSR 68
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DHY+ DE ++R V I RD+ +Q + + YD +G+CH+ L Q
Sbjct: 69 IVLVIDHYVPERDEDSHRIVRIARDWARDQQLPHVYD------------SQGICHVVLPQ 116
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG + +G DSH T GAFG + G+G+T+ VL TG++ L+VP T++ DG +
Sbjct: 117 NGHIRPGMLCVGGDSHAPTGGAFGAYMFGVGSTEMLGVLVTGEIWLRVPETVQMWWDGAL 176
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E G + G++
Sbjct: 177 LAGVSAKDMMLHMIGRFGMNGGRYQAVEFAGPAVAALSMQERMTLSNMSAELGAQAGLIA 236
Query: 308 ADGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TT +L + P + ++DE A + +RFD S LEP +A PHSP N R
Sbjct: 237 PDETTAAFLAAAAAPPVDIAPWFTDEDAER-TRHRFDASTLEPHIAAPHSPANSHSVRRY 295
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP 423
+ +D YIG+CTG K +D AAA+V G K T L+ PA+ + D
Sbjct: 296 AGMPVDVAYIGACTGAKLDDLRAAARVL--RGHKAAAGTRLIVAPASLR---DQEQARAE 350
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G Q+ +AG + + +CGAC G
Sbjct: 351 G-----VLQVLIDAGAELLPT-ACGACSG 373
>gi|384171077|ref|YP_005552454.1| 3-isopropylmalate dehydratase large subunit [Arcobacter sp. L]
gi|345470687|dbj|BAK72137.1| 3-isopropylmalate dehydratase large subunit [Arcobacter sp. L]
Length = 426
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 227/395 (57%), Gaps = 36/395 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K + G+ V +D+++ +D+ P S F E G K+ + +
Sbjct: 4 TITEKIFSEHVGK-VVYAGEIVRSPIDMVIGNDITTPISIRAF--EDGGFEKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF M+ N+K F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQAKISRDFAMKHNLKNFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ V G+
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVVFKGKPAP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL+II + V GA YK++EF G T++ LSM++R +LCNM +EAG KNG+V D
Sbjct: 171 FVTGKDLILEIIRILGVDGALYKALEFTGDTIQYLSMDDRFSLCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYLEDKTS-----LPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RAL 361
T ++L DK S L EP YSD+ A++ D++KLEP++A P P N ++
Sbjct: 231 EITKEFL-DKVSAANGGLRAEPKIHYSDDDANYCQVIEIDVAKLEPVIAYPFLPSNGHSV 289
Query: 362 ARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVY 418
++ D +++D+V+IGSCT G+ DF AA++ +GKKV V L P TQK+ +
Sbjct: 290 SQAVSDNIRVDQVFIGSCTNGRLSDFKMAAEIL--AGKKVARHVRLILTPGTQKILREAT 347
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
L + +AG ++P+CGACLGG
Sbjct: 348 KLGYIDT--------LVDAGA-VVSNPTCGACLGG 373
>gi|383320571|ref|YP_005381412.1| 3-isopropylmalate dehydratase large subunit [Methanocella conradii
HZ254]
gi|379321941|gb|AFD00894.1| 3-isopropylmalate dehydratase, large subunit [Methanocella conradii
HZ254]
Length = 417
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 211/390 (54%), Gaps = 37/390 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S S K ++PGD + V VD + D P + +KE G KV+D +K+
Sbjct: 4 TLAEKILSEKSGK-DVAPGDLITVPVDFVFGQDGTMPLAIQQMEKELGTR-KVFDPQKVG 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + E+ + +R F E I YF++ D G+CH +A E
Sbjct: 62 AVCDHASPSPSEQVSNVHIFMRRFARENGI-YFFENGD-----------GICHQVVA-ER 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT GA FATG+G+TD G ++ G L+VP RF +DGE+P
Sbjct: 109 FAAPGKIIIGADSHTCTHGALAAFATGMGSTDVGAIMAYGTTWLRVPEAFRFQIDGELPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ +KD+ L I+ EI+ GATY SME+ G+TV+++S+E R+ L NM +EAGGK G+ PAD
Sbjct: 169 HVTSKDVFLHIVKEITADGATYMSMEYQGSTVDKMSVESRLVLSNMAIEAGGKVGLCPAD 228
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
YL E Y P+ +D+ A + E D S+LEP+VA PH DN E V
Sbjct: 229 EKVRAYLKEHGREGEYRPLAADKDAVYADELFVDASRLEPMVAYPHRVDNVKPVSELAGV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDV----YTLPV 422
+D+V IGSCT G+ ED AA++ G+K T LV PA++KV D Y +
Sbjct: 289 PLDQVCIGSCTNGRLEDLKMAAEIL--KGRKAHRDTRLVVYPASRKVLADAIRLGYIETL 346
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+G C +P CG C+G
Sbjct: 347 VQAGAAVC-------------APGCGFCIG 363
>gi|188996420|ref|YP_001930671.1| 3-isopropylmalate dehydratase large subunit [Sulfurihydrogenibium
sp. YO3AOP1]
gi|226736004|sp|B2V844.1|LEUC_SULSY RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|188931487|gb|ACD66117.1| homoaconitate hydratase family protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 431
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 214/386 (55%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+TEKI + + + + PG+ V V VD+ + +D+ P + +K +G + KV D K
Sbjct: 2 GMTITEKIIAAHAGRDYVEPGELVTVKVDLAIANDITAPLAIKQLEK-YGID-KVHDPNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D + + + I RDF + IK +++ +D GV H L +
Sbjct: 60 IALVMDHFFPPKDIMSAQQIKISRDFAKKMGIKNYFEGQD----------SGVMHTLLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG++++G DSHTCT G G F+TG+G+TD ++ TG+ L+VP +++FV +
Sbjct: 110 KGFVVPGDLVIGADSHTCTYGGIGAFSTGVGSTDIAYIWATGETWLRVPESMKFVFYNKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD +L +IG+I V GA YK+ME+ G + L ++ R+T+ NM +EAGGK+G++
Sbjct: 170 QKWVGGKDFVLTVIGKIGVDGALYKAMEYQGEAIRALDIDNRLTIANMAIEAGGKSGIIE 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T ++ +T+ ++ SD A + EY FD SK+EP+VA P P N E
Sbjct: 230 PDEKTVDWVRKRTNREFKLYKSDPDAKYCCEYEFDASKIEPVVACPSLPSNVKPVSEVAG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ D AA + + +V ++PA+ +++
Sbjct: 290 THIDQVFIGSCTNGRLSDLRIAAAILKSKKVHPEVRCIVIPASDQIYKQALH-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +I +AGC S +CG CLGG
Sbjct: 342 EGIIEILADAGCLISTS-TCGPCLGG 366
>gi|288573965|ref|ZP_06392322.1| homoaconitate hydratase family protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569706|gb|EFC91263.1| homoaconitate hydratase family protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 419
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 203/386 (52%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +I + S P + G V+VD +D+ P + ++V+DR++
Sbjct: 4 TLASQIIASHSTDP-VKEGAICRVSVDFAFVNDITAPPAIDAMAAM--GRSRVFDRKRCA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
IIPDH+ D + R F EQ + Y+ ++G G+ H L ++G
Sbjct: 61 IIPDHFTPNKDIASAEQAKKSRIFASEQKMLYW----EVGR-------AGIEHAMLPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+++LG DSHTCT GA G F+TG+G+TD TG+ L VPPT+R G +
Sbjct: 110 YILPGDIVLGADSHTCTGGAMGAFSTGMGSTDLAGAWATGETWLMVPPTVRIDFRGSISR 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL ++ EISV GA Y ++EF G + +SM+ R T+ NM VEAGGK G+ D
Sbjct: 170 HITGKDLILAVLREISVQGARYMALEFGGDALASMSMDHRFTVANMAVEAGGKAGLFVPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TT Y E + S P+ Y DE + D+ KL PLVA PHSPDN A D +
Sbjct: 230 ETTLAYAEARASRPFTARYPDEGCEYAKRVEIDVEKLTPLVAAPHSPDNVRPASTFGDTE 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I +V+IGSCT G+ ED AAA V GKKV V ++PA+ +V+
Sbjct: 290 IQQVFIGSCTNGRLEDMAAAASVL--EGKKVHPSVRCIVIPASYEVYNACLE-------- 339
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
K + F EAG +P+CG CLGG
Sbjct: 340 KGYIRTFTEAGAAV-CTPTCGPCLGG 364
>gi|313683599|ref|YP_004061337.1| 3-isopropylmalate dehydratase large subunit [Sulfuricurvum kujiense
DSM 16994]
gi|313156459|gb|ADR35137.1| 3-isopropylmalate dehydratase, large subunit [Sulfuricurvum
kujiense DSM 16994]
Length = 422
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 223/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS P + G+ V +D+++ +D+ P S F E K+ + E
Sbjct: 4 TITEKIFSEHVGHP-VYAGEIVRSPIDMVIGNDITTPISIKAF--EDSGATKLANPEGFS 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + +K+F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQARISRDFAKKHAMKHFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ VL G+
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFAMITGGNWFKVPESIKVVLSGKPGT 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y KD+IL++I I V GA Y+++EFVG+T++ LSM++R ++CNM +EAG K+G+V D
Sbjct: 171 YTTGKDIILEVIRMIGVDGALYRTLEFVGSTIQYLSMDDRFSMCNMAIEAGAKSGIVAYD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L DK L EP YSD+ A+++ D+ +LEP++A P P N +L++
Sbjct: 231 DITAEFLADK-PLAREPKIHYSDDDATYVQVLEIDVGRLEPVIAYPFLPSNGHSLSQAVS 289
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D +K+D+ +IGSCT G+ D AA++ GK+V V + P TQ++ + L
Sbjct: 290 DKIKVDQAFIGSCTNGRLSDLKIAAEIL--KGKRVHQDVRLIVTPGTQRIVREATKL--- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 345 -----GYIDIIIDAG-GVVSNPTCGACLGG 368
>gi|429217744|ref|YP_007179388.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Deinococcus peraridilitoris
DSM 19664]
gi|429128607|gb|AFZ65622.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Deinococcus peraridilitoris
DSM 19664]
Length = 427
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 210/419 (50%), Gaps = 39/419 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S + PG + V+ ++ H++ P + + + E G N +V+D E+I
Sbjct: 3 MTIAEKILAANSGHDSVVPGQLLEVSTSWVLCHEITTPAALRMLE-ERGMN-RVFDPERI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E I++F+D+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVHENGIRHFFDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PGE L+ DSHTC AGA G FATG+G+TD + GKV KVP T+ + GEM
Sbjct: 111 GLIKPGETLVSGDSHTCNAGALGAFATGVGSTDLAGAIYAGKVWFKVPETMLIRVTGEMQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
KD++L++I I GA Y ME+VG T++R+ ME R TL NM +EAGGK G+V
Sbjct: 171 PGTTPKDIVLEVIKRIGADGANYMVMEWVGDTIDRMDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T YL + P Y SD A + D SK+EP VA PH P N +A K
Sbjct: 231 DDVTRDYLAARGVTPDQYTEFTSDPDAHYKVVIDVDASKVEPTVAYPHIPSNGRVAGSDK 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ + Y+GSCT G+ D A + V +VPATQ +W +
Sbjct: 291 -IAVTHAYVGSCTNGRISDLREVANILRDRKIADGVQMIVVPATQAIWKQ--------AA 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLCL 470
+ +IF +AG + PSCGACLG GP D RM +P A + L
Sbjct: 342 QEGLMEIFVDAGASV-SYPSCGACLGMHSGVLGPGDVCISSSNRNFVGRMGDPSAEIYL 399
>gi|423081963|ref|ZP_17070558.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
002-P50-2011]
gi|423085567|ref|ZP_17074009.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
050-P50-2011]
gi|357549213|gb|EHJ31060.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
002-P50-2011]
gi|357549484|gb|EHJ31330.1| 3-isopropylmalate dehydratase, large subunit [Clostridium difficile
050-P50-2011]
Length = 423
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 224/392 (57%), Gaps = 30/392 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI ++ ++ ++ G + ++D+++ +D+ P + F+K E+ V+D+ K+
Sbjct: 1 MTMTQKILAKHAKLNEVKKGQLIEADLDVVLGNDITSPVAIREFEKLGIED--VYDKTKV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH+ D ++ R F + + F+D+ D+G + H+ L ++
Sbjct: 59 VMVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 109 GIVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKPN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+IL IIGEI V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P
Sbjct: 169 KWISGKDIILHIIGEIGVDGALYKSMEFCGDGVEYLSMDDRFTICNMAIEAGAKNGIFPV 228
Query: 309 DGTTFKYLED-KTSLPYEPVY---SDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALAR 363
D T +Y+ K S + V +DE A + Y D+++L+ VA PH P+N R +
Sbjct: 229 DDKTMEYINSHKCSTITKDVNIYEADEDAVYDEVYEIDLAELKETVAFPHLPENTRTVDD 288
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 289 IDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE-- 344
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 345 ------KGYITTFIEAGA-AVSTPTCGPCLGG 369
>gi|392407630|ref|YP_006444238.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Anaerobaculum mobile DSM
13181]
gi|390620766|gb|AFM21913.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Anaerobaculum mobile DSM
13181]
Length = 420
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 213/393 (54%), Gaps = 32/393 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S + + GD V VD+LM HD GP + F EF E VWD +++
Sbjct: 6 TIVEKIIS-SHVGEVVRAGDFCVVTVDMLMCHDATGPLTIKAFN-EF-ERENVWDPQRVT 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + +ER + D+LR F EQ I++F D+G +G+CH + ++G
Sbjct: 63 FVLDHAAPSPNERVSGLHDMLRSFAKEQGIRFF----DVG--------EGICHQLMLEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++ LGTDSHTCT GA G + GIG+TDA VL TGK+ LKVP T++ ++
Sbjct: 111 LVLPGDIALGTDSHTCTYGAVGALSFGIGSTDASGVLLTGKLWLKVPYTMKIIVSNSFKP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL+L +IG + GA Y +EF G+ ++ +SM RMTLCNM +EAG K G+VP D
Sbjct: 171 GVYPKDLMLNVIGILKADGADYLCLEFSGSCIDEMSMGGRMTLCNMAIEAGAKGGIVPPD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ ++S + P SD+ A F+ D + LEP VA PH+ DN E +
Sbjct: 231 EKTLEWVRRRSSRSFAPQTSDKDAYFIDVLHIDAAGLEPQVAFPHAVDNVHPVSEATGIP 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I +V++G+CT G+ ED AA + SG++V V + PA+++ ++ +
Sbjct: 291 IQQVFLGTCTNGRLEDLREAASIL--SGRRVHDGVRLLVCPASRQTLLEAIEEGI----- 343
Query: 428 KTCSQIFEEAGCDTPASPSCGAC----LGGPKD 456
S + E P P CG C LG P D
Sbjct: 344 --ISTLLEAGATVIP--PGCGPCPGTHLGVPGD 372
>gi|333895877|ref|YP_004469751.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111142|gb|AEF16079.1| 3-isopropylmalate dehydratase large subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 418
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 228/404 (56%), Gaps = 31/404 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDR 125
+TLT+KI + + ++ PGD + ++VD+++ +DV P + KEF + +V+++
Sbjct: 2 GLTLTQKILANKAGY-EVKPGDLIEIDVDMVLGNDVTSPVAI----KEFLKIGVKEVFNK 56
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
E+I ++PDH++ D ++ V+I+R F E I F+++ +G + H L
Sbjct: 57 ERIALVPDHFVPNKDIKSAEQVNIVRKFAREYGIVNFFEVGQMG----------IEHALL 106
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G PG+V++G DSHTCT GA F+TGIG+TD + TGK KVP ++F L G
Sbjct: 107 PEKGLVLPGDVVIGADSHTCTYGAITCFSTGIGSTDMACAMATGKAWFKVPEAIKFNLKG 166
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
++ ++ KD+IL IIG I V GA YKSMEF G + LS+++R T+ NM +EAG KNG+
Sbjct: 167 KLNKWVSGKDVILYIIGMIGVDGALYKSMEFTG-DISSLSIDDRFTIANMAIEAGAKNGI 225
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T Y+ + Y+ +D+ A ++ Y D+S ++P VA PH P+N +
Sbjct: 226 FDYDEITEAYVLGRAKRNYKVFKADDDAEYVKTYDIDLSTIKPQVAFPHLPENTKSIDDV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+VKID+V IGSCT G+ +D ++ GKKV V + PATQ ++++
Sbjct: 286 GNVKIDQVVIGSCTNGRLQDMEVTYEIL--KGKKVHPDVRLIIFPATQDIYLECVK---- 339
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AG ++P+CG CLGG A+ +++
Sbjct: 340 ----RGYIEEFIKAGAAV-STPTCGPCLGGHMGILAKGERAIST 378
>gi|363897355|ref|ZP_09323894.1| 3-isopropylmalate dehydratase large subunit [Oribacterium sp. ACB7]
gi|361958852|gb|EHL12149.1| 3-isopropylmalate dehydratase large subunit [Oribacterium sp. ACB7]
Length = 421
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 213/386 (55%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI ++ + ++ G + VD++ +D+ P I ++E + V+D++K
Sbjct: 2 GMTMSQKILAKHAGLEKVESGQLILAKVDLVHGNDITTP--VAIREREKIQGKGVFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V + DH++ D + + I R++ E +K++YD+ ++G + H + +
Sbjct: 60 VVFVMDHFVPNKDITSAKCTQICRNYAKENGLKHYYDVGNMG----------IEHALIPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G GE+ +G DSHTCT GA G F+TG+G+TD + TG++ KVP ++ +L G++
Sbjct: 110 QGLITAGELSVGADSHTCTYGALGAFSTGVGSTDMAAAMATGELWFKVPNAIQVILKGKL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD+IL +IG+I V GA Y+S+EF G V LSM++R +CNM +EAGGKNG+ P
Sbjct: 170 QKYVSGKDVILHLIGKIGVDGALYESIEFSGEGVSSLSMDDRFAICNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y++ + Y +D A + D+S L+ VA PH P+N
Sbjct: 230 VDEKTIEYIKAHGNKSYTVYEADSDAKYERVIEIDLSTLQSTVAFPHLPENTHEIGTFDK 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ ID+V IGSCT G+ D +A++ + ++PATQK++++
Sbjct: 290 IPIDQVVIGSCTNGRLSDIAVSAELLRGRHVAENIRCIVIPATQKIYLEAME-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
K + EAG ++P+CG CLGG
Sbjct: 342 KGYIKDLIEAGA-VVSTPTCGPCLGG 366
>gi|313896972|ref|ZP_07830519.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312974419|gb|EFR39887.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 420
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 209/387 (54%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + G V +D+++ +DV GP S KEF + + V+DREK
Sbjct: 3 MNMSEKILARHAGLDAVEAGQLVTCELDMVLANDVTGPPSI----KEFEKTGRPVFDREK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D +++ I+RDF NI ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSSELAKIMRDFARRHNILHYYEQGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 109 KGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+ P
Sbjct: 169 PADISGKDVILTLIGMIGVDGALYRSLEFTGEGVAELTMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
D Y+ + + + P +D AS+ D+S L P+VA PH P+N R + +
Sbjct: 229 YDDVCRDYVAGRMTADFTPAEADPDASYAQTVEIDLSALRPVVAFPHLPENTRRVMDLTE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
V ID+V IGSCT G+ ED AA++ V ++P + V+ + S
Sbjct: 289 PVAIDQVVIGSCTNGRLEDMEIAAEILKGHTVHPHVRCIVIPGSPWVYQE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 341 RRGYLDIFMDAGAAV-STPTCGPCLGG 366
>gi|320334121|ref|YP_004170832.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
maricopensis DSM 21211]
gi|319755410|gb|ADV67167.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
maricopensis DSM 21211]
Length = 428
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 216/421 (51%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S + PG + D ++ H++ P + + + E G + +V++ ++I
Sbjct: 3 MTIAEKILAAHSGNETVVPGQLIECATDWVLCHEITTPAALRMLE-ERGMD-RVFNPDQI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ IK+F+D+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVQEKGIKHFFDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG+ L+ DSHTC AGA G FATG+G+TD + GKV KVP T+ + GE+
Sbjct: 111 GLMKPGQTLVSGDSHTCNAGALGTFATGVGSTDLAGAIYAGKVWFKVPDTMLIRVTGELK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KDL+L++I I GA Y ME+VG T++R+ ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDLVLEVIKRIGADGANYLVMEWVGETIDRMDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TT Y+ + P Y SD A++ D S +EP VA PH P N +A
Sbjct: 231 DDTTRAYMAARGVTPDQYTEYQSDADANYKVVVEIDASAVEPTVAYPHIPSNGRVA-GTD 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+ + Y+GSCT G+ D A++ G+KV V +VPATQ +W
Sbjct: 290 AIAVTHAYVGSCTNGRISDLREVARIL--KGRKVAENVQMIVVPATQAIWKQ-------- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ + +IF EAG + PSCGACLG GP D RM +P A +
Sbjct: 340 AAQEGLLEIFVEAGASV-SYPSCGACLGMHSGVLGPDDVCISSSNRNFVGRMGDPSAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|260880973|ref|ZP_05403304.2| 3-isopropylmalate dehydratase, large subunit [Mitsuokella multacida
DSM 20544]
gi|260850086|gb|EEX70093.1| 3-isopropylmalate dehydratase, large subunit [Mitsuokella multacida
DSM 20544]
Length = 420
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 214/386 (55%), Gaps = 23/386 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT++EKI ++ + + G V +D+++ +D+ P S F+ E G V+D KI
Sbjct: 3 MTMSEKILAKHAGLDSVKAGQLVTCELDMVLANDITAPPSIAKFE-EIGR--PVFDNTKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH+ D ++ +RDF + I +++ +G + H+ L ++
Sbjct: 60 ALVPDHFQPAKDIKSAELAKTVRDFAHKYKIVNYFEQGRVG----------IEHVILPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG + +G DSHTCT GA F+TG+G+TD G + TGK KVP ++ L GE
Sbjct: 110 GIVAPGMLTIGADSHTCTYGAVNGFSTGVGSTDLGAAMATGKAWFKVPEAIKVNLTGEKS 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL +IG I V GA YKS+EF G V+ L+M +R+T+ NM +EAGGK G+ P
Sbjct: 170 ADITGKDVILTLIGMIGVDGALYKSLEFAGPGVKALTMTDRLTISNMAIEAGGKAGIFPF 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T Y++ + + PYEPV +D+ A + E ++S+L+P+VA PH P N + K+
Sbjct: 230 DEITKAYVDARVTKPYEPVAADDDAEYCREVDINLSELKPVVAFPHLPGNTKRVEDIKEP 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
++ID+V IGSCT G+ ED AA + +V ++P + ++ + S
Sbjct: 290 IEIDQVIIGSCTNGRLEDMEIAASILKGHKVADRVRCIVIPGSPAIYKE--------SMK 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AGC ++P+CG CLGG
Sbjct: 342 RGYIDTFIDAGCAV-STPTCGPCLGG 366
>gi|197303131|ref|ZP_03168176.1| hypothetical protein RUMLAC_01855 [Ruminococcus lactaris ATCC
29176]
gi|197297786|gb|EDY32341.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus lactaris
ATCC 29176]
Length = 424
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 210/388 (54%), Gaps = 25/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +DI+M +D+ GP + I K+ + V+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVEAGQLIEAKLDIVMANDITGPMALPILKQM---SDTVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH+ D ++ N +R+F Q +K++++ GV H L +
Sbjct: 60 VFVPDHFTPNKDIKSAENSKAIREFSKAQGLKWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GVVTAGECIIGADSHTCTYGALGAFSTGMGTTDVATGMATGEIWFKVPSAIKFVLTGKPS 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGQIGVDGALYKSMEFTGDGIACLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T YL + Y +DE A + D+SK+ P VA PH P N E +
Sbjct: 230 DEKTKAYLAEHCKKEYTVYEADEDAVYDEVIEIDLSKVRPTVAFPHLPGNAKTIDEVEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA + V ++PATQK++ +
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDLRKAAAILKGHTVHPDVRVMVIPATQKIYKECIK------ 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC +PSCG C+GG
Sbjct: 344 --EGLLDIFVDAGCAV-NTPSCGPCMGG 368
>gi|95116500|gb|ABF56163.1| putative 3-isopropylmalate dehydratase large subunit [Theobroma
cacao]
Length = 120
Score = 242 bits (617), Expect = 4e-61, Method: Composition-based stats.
Identities = 115/120 (95%), Positives = 118/120 (98%)
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGK+LLKVPPTLRFV+
Sbjct: 1 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPTLRFVM 60
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
DGEMP YLLAKDLILQIIGEISVAGATYKSMEFVGTTVE L+MEERMTLCNMVVEAGGKN
Sbjct: 61 DGEMPHYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCNMVVEAGGKN 120
>gi|242308866|ref|ZP_04808021.1| 3-isopropylmalate dehydratase large subunit [Helicobacter pullorum
MIT 98-5489]
gi|239524530|gb|EEQ64396.1| 3-isopropylmalate dehydratase large subunit [Helicobacter pullorum
MIT 98-5489]
Length = 422
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 223/390 (57%), Gaps = 30/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS K ++ G+ + +D+++ +D+ P S +++ EN + + +
Sbjct: 4 TITEKIFSEHVGK-KVYAGEIIDCPIDMVIGNDITTPLSIKAYEQSGAEN--LANPDGFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + +KYF+D KD+G + H L + G
Sbjct: 61 IVMDHFIPAKDIASANQARISRDFAKKHKLKYFFDEKDMG----------IEHALLPERG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G+V++G DSHTCT GA G F+TG+G+TD + + TGK K+P ++ G+
Sbjct: 111 LVVSGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKIPSAIKVEFIGKPAK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL++I +I V GA Y+++EF G ++ L M++R +LCNM +EAG KNG++ D
Sbjct: 171 HIYGKDLILEVIRQIGVDGALYQTLEFCGEGIKYLGMDDRFSLCNMAIEAGAKNGIIAPD 230
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L+ + L P YSD A++ + DISKLEP++A P P N +++++ K
Sbjct: 231 EITREFLKSRPFLRANPREFYSDADANYTQTIQIDISKLEPVIAYPFLPSNGKSISQALK 290
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D+KID+V+IGSCT G+ D A+++ GKKV V + P TQ ++ + + L
Sbjct: 291 DDLKIDQVFIGSCTNGRLSDLKIASEIL--KGKKVHQDVRLIITPGTQNIYKEAHKLGY- 347
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I EAG ++P+CGACLGG
Sbjct: 348 -------IDILLEAGA-LISNPTCGACLGG 369
>gi|301631354|ref|XP_002944764.1| PREDICTED: isopropylmalate/citramalate isomerase large subunit-like
[Xenopus (Silurana) tropicalis]
Length = 426
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 205/397 (51%), Gaps = 31/397 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ RA PQ+ PGD V VD+ M HD GP G +VWD E+IV
Sbjct: 5 TLAQKLVGRACGNPQVQPGDIVICRVDLAMMHDSGGPRRLKPHLDALG--VRVWDPERIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ +DE + + V I RD+ EQ I++FYD +G+CH+ Q G
Sbjct: 63 VVTDHYVPATDEGSAQIVRIARDWVREQGIRHFYD------------EQGICHVVAPQHG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+CT GAFG + GIG T+ V TG++ L+VP T+ G +P
Sbjct: 111 HLRPGMFAVGGDSHSCTGGAFGAYMFGIGATEMLSVAVTGEIWLRVPHTIAMEWTGRLPA 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + G Y+++EF G V+ LSM ERMTL NM E G + G+V D
Sbjct: 171 GVCAKDMMLHMCTRFGMDGGQYEAVEFCGEAVQSLSMNERMTLSNMATELGTQAGLVAPD 230
Query: 310 GTTFKYLEDKTSLPYEPVY------SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
TT ++L D +P + ++ +DE A L+ + D L P V+ P SP A
Sbjct: 231 ATTAQWLRD-VGVPGDALHGMAQWRTDEGAPLLARHCMDARSLAPQVSAPGSPAQAQDAA 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVYTLPV 422
++D YIG+CTG K +D AA+VF K V + PA+ + D
Sbjct: 290 TFAHERLDIAYIGACTGAKLDDLRMAAQVFRGGRKTAAGVRLMVAPASAQ---DQRQAAA 346
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
G Q +AG + + +CGAC G +T+A
Sbjct: 347 EG-----VLQTLMDAGAELLPN-ACGACAGYGANTFA 377
>gi|301059861|ref|ZP_07200752.1| 3-isopropylmalate dehydratase, large subunit [delta proteobacterium
NaphS2]
gi|300446011|gb|EFK09885.1| 3-isopropylmalate dehydratase, large subunit [delta proteobacterium
NaphS2]
Length = 419
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 222/403 (55%), Gaps = 29/403 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+TEKI + + + ++PGD V V VD+ + +D+ P + +F E G + +V+DREK+
Sbjct: 3 MTITEKILAAHAGQDAVAPGDLVQVRVDMALANDITAPLAIAVFH-ELGAS-QVFDREKV 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++PDH++ D + V ++ F + +K ++ + D+G + H+ L ++
Sbjct: 61 ALVPDHFVPNKDIASAEQVKMMEAFADQYKLKNYFKVGDVG----------IEHVILPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG++++G DSHTCT GA G F+TG+G+TD G ++ TGK LKVP T++ + G +
Sbjct: 111 GLVAPGDLVIGADSHTCTYGAMGAFSTGVGSTDLGAIMATGKTWLKVPETIKVIYKGTLK 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG I V GA Y+++EF G ++ L M +R T+ NM VEAG KNG+
Sbjct: 171 PWVGGKDLILFTIGRIGVQGARYRTLEFTGPVLKELRMSDRFTMANMAVEAGAKNGIFEP 230
Query: 309 DGTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D +++ +T E VY SD A + FD+S LE VA PHSP+N +
Sbjct: 231 DDAVRDFMKGRTE--REGVYWKSDPDARYDEIVEFDLSDLELQVACPHSPENVLPVSSVE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
V +++V+IGSCT G +D AA FL G++V K ++P + ++
Sbjct: 289 KVPLNQVFIGSCTNGSIDDLRMAAN-FL-KGRRVAEKTRLIVIPGSPLIYKQAMQ----- 341
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ ++ +AG P CG CLGG A + +A+
Sbjct: 342 ---EGILEVLLDAGAAI-GPPCCGPCLGGHMGILAGGEKALAT 380
>gi|78778211|ref|YP_394526.1| 3-isopropylmalate dehydratase large subunit [Sulfurimonas
denitrificans DSM 1251]
gi|123549562|sp|Q30NZ0.1|LEUC_SULDN RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|78498751|gb|ABB45291.1| 3-isopropylmalate dehydratase, large subunit [Sulfurimonas
denitrificans DSM 1251]
Length = 419
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 223/392 (56%), Gaps = 31/392 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+TEKIFS+ + + G+ + N+D+++ +D+ P S F E K+ + +
Sbjct: 2 AQTITEKIFSQHVGRAVFA-GEIIRCNIDMVIGNDITTPISIKAF--EDSGATKLANPDG 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+ DH+I D + I RDF + ++K F+D KD+G + H L +
Sbjct: 59 FSIVLDHFIPAKDIASANQARISRDFAKKYSLKNFFDEKDMG----------IEHALLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ L G+
Sbjct: 109 KGLVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFAMITGGNWFKVPESIKVNLSGKP 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y KD+IL+II I V GA YK++EF G+T+E LS+++R ++CNM +EAG K+G+V
Sbjct: 169 SKYTTGKDIILEIIRLIGVDGALYKTLEFTGSTIEHLSIDDRFSMCNMAIEAGAKSGIVA 228
Query: 308 ADGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARE 364
D TT +L DK +L EP YSD AS++ D++ L+P++A P P N ++ +
Sbjct: 229 YDETTKAFLADK-NLAREPRIHYSDADASYVQILNIDVASLDPVIAYPFLPSNGHSVVQA 287
Query: 365 CKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLP 421
KD +KID+ +IGSCT G+ D AA++ GK+V V + P TQ + + L
Sbjct: 288 QKDNIKIDQAFIGSCTNGRLSDLKVAAEIL--KGKRVHPDVRLIVTPGTQMILREANKLG 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 346 YI--------DIIVDAG-GVVSNPTCGACLGG 368
>gi|150400745|ref|YP_001324511.1| 3-isopropylmalate dehydratase [Methanococcus aeolicus Nankai-3]
gi|150013448|gb|ABR55899.1| 3-isopropylmalate dehydratase [Methanococcus aeolicus Nankai-3]
Length = 421
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 212/400 (53%), Gaps = 40/400 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL E+I S+ K + D V +++D+ MTHD P S FK+ KVWD +KI
Sbjct: 1 MTLAEEILSKKVGKKVKAG-DVVEIDIDLAMTHDGTTPLSAKAFKQI---TDKVWDNKKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH + + +A I R+F EQNI Y D +GVCH L +
Sbjct: 57 VIVFDHNVPANTLKAANMQKITREFIKEQNIINHY-----------LDGEGVCHQVLPEN 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P V+ G DSHTCT GAFG FATG G TD G + TGK LKVP T+R ++GE
Sbjct: 106 GHIQPNMVIAGGDSHTCTYGAFGAFATGFGATDMGNIYATGKTWLKVPKTIRINVNGE-N 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
D + KD+IL+I E+ +GATY ++E+ G +++LSM+ERM L NM +E GGK G++ A
Sbjct: 165 DKITGKDIILKICKEVGRSGATYMALEYGGEAIKKLSMDERMVLSNMAIEMGGKVGLIEA 224
Query: 309 DGTTFKYL-------EDKTSLPYEPVYSDEKA----SFLSEYRFDISKLEPLVAKPHSPD 357
D TT+ YL E L + DE ++ DI+ +E VA PH PD
Sbjct: 225 DETTYNYLRNVGISEEKILELKKNQITIDENNIDNDNYYKIINIDITDMEEQVACPHHPD 284
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWM 415
N E K I++V+IGSCT G+ D A+K GKKV V ++PA++ ++
Sbjct: 285 NVKNISEVKGAPINQVFIGSCTNGRLNDLRIASKYL--KGKKVHNDVRLIVIPASKSIFK 342
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ IF +AG +P CG CLG +
Sbjct: 343 QALK--------EGLIDIFVDAGA-LICTPGCGPCLGAHQ 373
>gi|154151614|ref|YP_001405232.1| 3-isopropylmalate dehydratase [Methanoregula boonei 6A8]
gi|171769714|sp|A7IA28.1|LEUC_METB6 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|154000166|gb|ABS56589.1| 3-isopropylmalate dehydratase [Methanoregula boonei 6A8]
Length = 416
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 208/384 (54%), Gaps = 24/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIFSR + G+ V +D M HD+ GP + F + G+ +V+D + ++
Sbjct: 4 TIVEKIFSRKC-GSDIKAGEVVMAPIDGAMIHDITGPLAIRKFYEMGGK--QVFDPKSVI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH I A N +R F EQ I + YDI + GVCH + ++G
Sbjct: 61 MLFDHQIPADSLEAAENHVFMRKFAAEQGI-HNYDINE-----------GVCHQVVLEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PGE+++G DSHTC GA G FATGIG+TD GF L G + KVP T+R + G+
Sbjct: 109 RAAPGEIVVGADSHTCMYGAVGAFATGIGSTDMGFALKFGALYFKVPETVRAEISGKFQK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL I +I GATY+++EF G T+ ++ M RMT CNM +E G K G+VP D
Sbjct: 169 RVGAKDLILSIAADIGADGATYQAIEFTGKTISKMDMAGRMTCCNMAIEMGAKAGIVPPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T++Y++ + + + SD+ A F + ++++ LEP VA PH+ D + +
Sbjct: 229 KVTWEYMKGRRKITPFALASDDDAKFAEKRTYNVADLEPQVAVPHNVDQGIPVGKVEGTH 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+V+IGSCT G+ ED + AA+V KV ++PA++ ++ +
Sbjct: 289 IDQVFIGSCTNGRYEDLVEAAEVLGKKKFDPKVRVLVIPASRDEYLKALEAGL------- 341
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ F AG A P CG C+GG
Sbjct: 342 -VERFVRAGALVEA-PCCGPCMGG 363
>gi|226356173|ref|YP_002785913.1| 3-isopropylmalate dehydratase large subunit [Deinococcus deserti
VCD115]
gi|226318163|gb|ACO46159.1| putative 3-isopropylmalate dehydratase, large subunit
(Isopropylmalate isomerase) (Alpha-IPM isomerase)
[Deinococcus deserti VCD115]
Length = 426
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 216/421 (51%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + S Q+ PG + D ++ H++ P + + + E G + +V++ ++I
Sbjct: 3 MTIAEKILAAHSGHDQVVPGQLIECATDWVLCHEITTPAALRMLE-ERGMD-QVFNPDQI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ IK+FYD+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVQEKGIKHFYDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG+ L+ DSHTC AGA G FATG+G+TD + GKV KVP T+ + G+
Sbjct: 111 GLVRPGQTLVSGDSHTCNAGALGMFATGVGSTDLAGAIYAGKVWFKVPETMLIRVSGQTQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD++L++I I GA Y ME+VG +++L ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDIVLEVIKRIGADGANYLVMEWVGDYIDQLDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TT YL+ + P Y SD A + D S +EP VA PH P N +A +
Sbjct: 231 DDTTRAYLQQRGVQPGEYTEYVSDADAQYKVVIDVDASAVEPTVAYPHIPSNGRVAGTDR 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+ + Y+GSCT G+ D A++ G+KV V +VPATQ +W
Sbjct: 291 -IAVTHAYVGSCTNGRIGDLREVARIL--KGRKVADGVQMIVVPATQAIWKQ-------- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ + +IF +AG + PSCGACLG GP D RM +P A +
Sbjct: 340 AAQEGLMEIFVDAGASV-SYPSCGACLGMHSGVLGPDDVCISSSNRNFVGRMGDPTAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|319764039|ref|YP_004127976.1| homoaconitate hydratase family protein [Alicycliphilus
denitrificans BC]
gi|317118600|gb|ADV01089.1| homoaconitate hydratase family protein [Alicycliphilus
denitrificans BC]
Length = 426
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 37/401 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ RA PQ+ PGD V VD+ M HD GP G +VWD E+IV
Sbjct: 5 TLAQKLVGRACGDPQVQPGDIVTCRVDLAMMHDSGGPRRLKPHLDSLG--VRVWDPERIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ +DE + + V I RD+ EQ I++FYD +G+CH+ G
Sbjct: 63 VVTDHYVPATDEGSAQIVRIARDWVREQGIRHFYD------------EQGICHVVTPSHG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+CT GAFG + GIG T+ V +G++ L+VP T+ G +P
Sbjct: 111 HLRPGMFAVGGDSHSCTGGAFGAYMFGIGATEMLGVAVSGEIWLRVPHTIAMEWTGRLPS 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + G Y+++EF G V LSM ERMTL NM E G + G++ D
Sbjct: 171 GVCAKDMMLYMCTRFGMDGGQYEAVEFCGDAVRALSMNERMTLSNMATELGAQAGLIAPD 230
Query: 310 GTTFKYLEDKTSLPYEPVY------SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
TT ++L+ +P + ++ +DE A L+ +R + L P V+ P SP A
Sbjct: 231 ATTVQWLQ-AAGVPGDALHDMTQWCTDEGAPLLARHRMEAGSLAPQVSAPGSPAQAQDAT 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGK-KVKVPTFLVPAT---QKVWMDVYT 419
++D YIG+CTG K +D AA+VF K V V + PA+ Q+ D
Sbjct: 290 AFAHERLDIAYIGACTGAKLDDLRMAAQVFRGGRKAAVGVRLMVAPASAQDQRQAADEGV 349
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
L Q +AG + + +CGAC G +T+AR
Sbjct: 350 L-----------QTLVDAGAELLPN-ACGACAGYGANTFAR 378
>gi|376295513|ref|YP_005166743.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
desulfuricans ND132]
gi|323458074|gb|EGB13939.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
desulfuricans ND132]
Length = 419
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 207/391 (52%), Gaps = 35/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI +++ PG V VD+++ +DV P + FK + KV+D++K+
Sbjct: 4 TLAEKILQNHTDQTVTGPGQIVQCRVDMVLANDVTAPLAAKAFKAMGAK--KVFDKDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V ++RDF E + ++Y+ ++G V H L ++G
Sbjct: 62 LVCDHFTPNKDIDSAEQVKVVRDFAEEMGVTHYYECGEVG----------VEHALLPEKG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHTCT G G FATG+G+TD G + G+ KVPPT+R L G +
Sbjct: 112 IVGPGNVVVGADSHTCTYGGLGAFATGMGSTDIGAAMALGETWFKVPPTIRVNLTGTPGE 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD +L IG + V+GA YK++E+ G V+ ++ME RMT+ NM +EAGGK G+ PAD
Sbjct: 172 FVGPKDFVLNQIGILGVSGALYKALEYGGEVVDAMTMEGRMTIANMAIEAGGKVGLFPAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y E + +D A + D++ + P VA PH P+N E +K
Sbjct: 232 RKTLDYAAKAGFKGGEIMAADADAVYERVLDIDVTGMAPQVACPHLPENVKPVDETAGLK 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + IGSCT G+ ED AA V G+KV KV ++PAT +W
Sbjct: 292 IHQAVIGSCTNGRIEDMRLAAGVL--KGRKVDPKVRCIILPATPSIW------------- 336
Query: 428 KTC-----SQIFEEAGCDTPASPSCGACLGG 453
K C +IF EAGC P+CG CLGG
Sbjct: 337 KACMREGLMEIFMEAGCIV-GPPTCGPCLGG 366
>gi|317153618|ref|YP_004121666.1| homoaconitate hydratase family protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943869|gb|ADU62920.1| homoaconitate hydratase family protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 419
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI +++ G + V +++ +D+ P + FK + KV+DR+K+
Sbjct: 4 TLAEKILQGHTDQEITGAGQIIQCRVSMVLANDITAPLAIKSFKAMGAD--KVFDRDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V ++R+F + ++Y+ ++G V H L ++G
Sbjct: 62 LVCDHFTPNKDIDSAEQVKVVREFAEAMGVTHYYECGEVG----------VEHALLPEKG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD G + G+ KVPPT+R + G+
Sbjct: 112 LVGPGDVVVGADSHTCTYGGLGAFATGMGSTDIGAAMALGETWFKVPPTIRVNMTGKPGQ 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KD IL +IG I VAGA YK++EF G V+ L++E RMT+ NM +EAGGK G+ P D
Sbjct: 172 YVGGKDYILNLIGRIGVAGALYKALEFSGEAVDNLTVEGRMTMANMAIEAGGKVGLFPVD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y L + D+ A + D++ + P VA PH PDN E ++
Sbjct: 232 AKTLAYTAQAGRLGDVAMTPDKDAVYERLVEIDVTSMAPQVACPHLPDNVKPVDETSGLR 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + IGSCT G+ ED AA + G+KV KV ++PAT +W
Sbjct: 292 IHQSVIGSCTNGRIEDMREAASIL--KGRKVDPKVRCIILPATPTIWKQCMK-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AGC P+CG CLGG
Sbjct: 342 EGLMEIFMDAGCIV-GPPTCGPCLGG 366
>gi|296271842|ref|YP_003654473.1| homoaconitate hydratase family protein [Arcobacter nitrofigilis DSM
7299]
gi|296096017|gb|ADG91967.1| homoaconitate hydratase family protein [Arcobacter nitrofigilis DSM
7299]
Length = 422
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 221/390 (56%), Gaps = 30/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS ++ G+ V +D+++ +D+ P S F++ G K+ + +
Sbjct: 4 TITEKIFSEHVGH-EVYAGEIVRSPIDMVIGNDITTPISIRAFEE--GGFEKLANPDGFA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + N+K F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQARISRDFAEKHNLKLFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ V G+
Sbjct: 111 LVLPGDVIIGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVVFKGKPGP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KDLIL+II + V GA YK++EF G ++ LSM++R +LCNM +EAG KNG+V D
Sbjct: 171 YITGKDLILEIIRILGVDGALYKALEFTGDSIPYLSMDDRFSLCNMAIEAGAKNGIVAYD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L+ + SL +P YSD+ A++ D+ L P++A P P N ++ + +
Sbjct: 231 EVTKEFLDSRDSLRAQPKIHYSDDDATYCQVIEIDVEALNPVIAYPFLPSNGHSVNQAVE 290
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
D +++D+V+IGSCT G+ DF AA+ L GKKV V L P TQK+ + L
Sbjct: 291 DNIRVDQVFIGSCTNGRLSDFKVAAQ--LLEGKKVARHVRLILTPGTQKILREATKL--- 345
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + G ++P+CGACLGG
Sbjct: 346 ----GYIDTLVDAGG--VVSNPTCGACLGG 369
>gi|170289819|ref|YP_001736635.1| homoaconitate hydratase family protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173899|gb|ACB06952.1| homoaconitate hydratase family protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 384
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 26/329 (7%)
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
E++V + DH++ D + LR+FC + +K+ YD++ G+CH+ L
Sbjct: 25 ERVVAVQDHFVPAKDIESANLSKRLREFCSKWGVKHHYDVR-----------WGICHVVL 73
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+EGH PG+V++GTDSH T GA G F+ GIG T+ L GK+ +VP T+ LDG
Sbjct: 74 PEEGHAAPGDVIVGTDSHMPTLGALGTFSVGIGATEMAAALIMGKLWFRVPETILVKLDG 133
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+P+ + AKD+IL++I I V GA YK++EF G+ ++ + M+ER L NM VEAG K +
Sbjct: 134 SLPEMVFAKDIILKLISMIGVDGANYKALEFNGSILKVMEMDERFVLTNMSVEAGAKTAI 193
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
+P D T YL + P YSD+ S E D+S LEPLVA PHSP N A E
Sbjct: 194 IPVDDVTLSYLNGRLRRAPRPEYSDD-GSHSDEISIDVSSLEPLVAIPHSPANVKPASEV 252
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D +ID+ +IGSCTGG+ +D AA++ G++VK V ++PA+++++++
Sbjct: 253 -DAEIDQAFIGSCTGGRLKDLEVAARIL--RGRRVKEGVRLIVIPASRRIYLEALR---- 305
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ I E+G T PSCG CLG
Sbjct: 306 ----RGIIDILIESGA-TIGPPSCGPCLG 329
>gi|357058964|ref|ZP_09119810.1| 3-isopropylmalate dehydratase large subunit [Selenomonas infelix
ATCC 43532]
gi|355373310|gb|EHG20631.1| 3-isopropylmalate dehydratase large subunit [Selenomonas infelix
ATCC 43532]
Length = 420
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 211/388 (54%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
M ++EKI +R + + PG V +D+++ +DV GP S KEF + + V+DR
Sbjct: 2 GMNMSEKILARHAGLDHVEPGQLVTCRLDMVLANDVTGPPSI----KEFEKTGRPVFDRT 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L
Sbjct: 58 KIALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVILP 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 108 EKGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+
Sbjct: 168 KPADISGKDVILTLIGMIGVDGALYQSLEFTGEGVADLTMTDRLTIANMAIEAGAKNGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
P D +Y+E + + +EPV D A + ++S+L P+V+ PH P+N +
Sbjct: 228 PYDDVCKEYVEGRMTGVFEPVNPDPDAQYARTVEINLSELRPVVSFPHLPENTKRVMDIP 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ + ID+V IGSCT G+ ED AA++ V ++P + V+ +
Sbjct: 288 EPIAIDQVVIGSCTNGRLEDMEIAAQILKGHEVHPHVRCIIIPGSPWVYQEAMR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AG ++P+CG CLGG
Sbjct: 342 --RGYLDIFMDAGAAV-STPTCGPCLGG 366
>gi|156937875|ref|YP_001435671.1| 3-isopropylmalate dehydratase [Ignicoccus hospitalis KIN4/I]
gi|156566859|gb|ABU82264.1| 3-isopropylmalate dehydratase [Ignicoccus hospitalis KIN4/I]
Length = 429
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 219/387 (56%), Gaps = 29/387 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI A ++SPG+ V V+VD +M D P + + ++ FGE +V+D EK+
Sbjct: 4 TIAEKILG-AKVGKEVSPGELVVVDVDGVMAQDGTAPLAIKVMRERFGEE-RVFDPEKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH +++ + +R FC + + D+G G+CH + +EG
Sbjct: 62 FVIDHTAPSNNPGTSELHIEMRRFCRKHKCTLY----DVGT--------GICHQVMVEEG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V +G DSHT T GA G FATG+G+TDA + TG++ KVP L+F L G+ +
Sbjct: 110 RAWPGSVFVGADSHTVTYGALGSFATGVGSTDAAIAMMTGRIWFKVPEALKFNLIGKFRE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KDLIL+IIG++ GATY S EFVG ++ + ++ R+T+ NMVVE G K G++PAD
Sbjct: 170 GVMSKDLILKIIGDLKEDGATYMSAEFVGDGLKDMRIDSRLTVSNMVVEMGAKVGLMPAD 229
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+++E + +P + D A + E+ +D+S++EP+VAKP+SP N E +
Sbjct: 230 EEVMRFVEGRARGVPKPELTFPDPGAHYKDEFTYDLSEIEPMVAKPYSPANSVPVSEVEG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGS 425
+++D+V+IGSCT G+ ED AA++ GKKV T ++ A++ V++
Sbjct: 290 IEVDQVFIGSCTNGRLEDVAVAARIL--KGKKVAPNTRCIVITASRNVYLQALK------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
K + EAGC +CG C+G
Sbjct: 342 --KGYVDVLTEAGCLVTFG-TCGPCVG 365
>gi|189485458|ref|YP_001956399.1| 3-isopropylmalate dehydratase large subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|226736010|sp|B1H0A6.1|LEUC_UNCTG RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|170287417|dbj|BAG13938.1| 3-isopropylmalate dehydratase large subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 420
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 218/386 (56%), Gaps = 24/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI + K + PG+ + +DI +++DV P + F+K + KV+D+ KI
Sbjct: 4 TITEKILASHCGKKVVEPGEFIEPKIDIALSNDVTAPLAVKEFRKTGIK--KVFDKNKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + +V +R+F E IK++Y+ GN GV H L ++G
Sbjct: 62 LVMDHFTPNKDILSAEHVKFVREFAKEHKIKHYYE---GGNV-------GVEHALLPEKG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG G+TD + TGK+ KVP +++F+L+ ++
Sbjct: 112 IVVPGDVIIGADSHTCTYGALGAFSTGGGSTDIAAAMATGKIWFKVPNSIKFILNRKLNK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL IIG I V GA Y SMEF G ++L+M +R T+ NM +EAGGKNG+ D
Sbjct: 172 WVSGKDIILYIIGLIGVDGALYNSMEFDGPLCKKLTMADRFTITNMAIEAGGKNGIFTPD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+ + Y+ SD+ A +L Y D SK+ P V+ P P N ++ K
Sbjct: 232 EITENYVAKRAQRKYKFYISDKDAKYLKIYEIDCSKILPQVSMPFLPSNTKAVKDIKKTY 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V IGSCT G+ ED AA + + GKKV V T ++PAT +V+
Sbjct: 292 IDQVVIGSCTNGRIEDLRVAASI-IKKGKKVNSNVRTLIIPATPEVYSQALD-------- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG A P+CG CLGG
Sbjct: 343 EGLLRIFMDAGAIISA-PTCGPCLGG 367
>gi|386285625|ref|ZP_10062839.1| 3-isopropylmalate dehydratase large subunit [Sulfurovum sp. AR]
gi|385343333|gb|EIF50055.1| 3-isopropylmalate dehydratase large subunit [Sulfurovum sp. AR]
Length = 426
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 219/394 (55%), Gaps = 34/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + + ++ G+ V V++D+++ +D+ P S F++ E K+ +
Sbjct: 4 TMTEKIFSEHAGR-EVHAGEIVRVDIDMIIGNDITTPISIRAFEESGAE--KLARPDNFC 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHYI D + I RDF + ++KYF+D KD+G + H L ++G
Sbjct: 61 IVMDHYIPAKDIASANQAKISRDFAYKHDLKYFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP T++ L G +
Sbjct: 111 LVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLSFGMITGGNWFKVPETIKVELTGIPGE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL++I +I V GA YK++EF G ++ L M +R ++ NMV+EAG KNG+ D
Sbjct: 171 HIYGKDIILELIRQIGVDGALYKAIEFTGEAIQHLGMADRFSIANMVIEAGAKNGIFAVD 230
Query: 310 GTTFKYLEDKTS----LPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
T YLE++ L EP SD A++ D + L P++A P P N
Sbjct: 231 DITLAYLEERKEINGGLRAEPKIHVSDPDANYCQVITIDTAALSPVIAYPFLPSNGKPVE 290
Query: 364 E--CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYT 419
+ D+K+D+V IGSCT G+ ED AA++ GK+V T ++ PATQK+ +
Sbjct: 291 QAVADDLKVDQVMIGSCTNGRIEDLRIAAEIM--KGKRVAKHTRMIVTPATQKILLQAQH 348
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ I EAG ++P+CGACLGG
Sbjct: 349 --------EGLMDILIEAGA-VVSNPTCGACLGG 373
>gi|395646275|ref|ZP_10434135.1| 3-isopropylmalate dehydratase large subunit [Methanofollis
liminatans DSM 4140]
gi|395443015|gb|EJG07772.1| 3-isopropylmalate dehydratase large subunit [Methanofollis
liminatans DSM 4140]
Length = 417
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 212/386 (54%), Gaps = 27/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIFS K ++ GD V VD M HD+ GP + F++ G +V+D +IV
Sbjct: 4 TLVEKIFSSRCGK-EIEAGDVVMAAVDRAMIHDITGPLAVQKFREMNG--TEVFDPARIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + +A N +R+F + Q I + YD+++ GVCH + ++G
Sbjct: 61 MLFDHQVPADSIQAAENQKFMREFALHQGI-HNYDLRE-----------GVCHQVMLEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PGE+++G+DSHTC GA G FATGIG+TD GFVL G + +VP ++R ++G
Sbjct: 109 HAAPGEIVVGSDSHTCMYGAAGAFATGIGSTDMGFVLRFGALYFRVPDSIRVEVNGAFAP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+I G I GATY+++EF G T + M RMT NM +E G K G+VP D
Sbjct: 169 RVGAKDLILEIAGSIGADGATYQALEFTGETFASMPMPGRMTCANMAIEMGAKAGIVPPD 228
Query: 310 GTTFKYLEDKTS--LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T++YL+ + P+ + SDE A++ FD + L P VA PH+ DN E
Sbjct: 229 AITWEYLKGRRPDVRPF-TLESDEDATYAELREFDAADLVPKVAVPHNVDNVVDVEEVAG 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V+IGSCT G+ EDF AA+V V L+PA++ ++ +
Sbjct: 288 THVDQVFIGSCTNGRYEDFAEAAEVLGDRTFSEDVRVILIPASRDEYLKTLRAGL----- 342
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG A P CG C+GG
Sbjct: 343 ---IERFVEAGALVEA-PCCGPCMGG 364
>gi|410997135|gb|AFV98600.1| 3-isopropylmalate dehydratase large subunit [uncultured
Sulfuricurvum sp. RIFRC-1]
Length = 422
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 223/390 (57%), Gaps = 31/390 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFS + + G+ V +D+++ +D+ P S F E K+ + E
Sbjct: 4 TITEKIFSEHVGR-TVYAGEIVRSPIDMVIGNDITTPISIKAF--EDSGATKLANPEGFS 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+I D + I RDF + +K+F+D KD+G + H L ++G
Sbjct: 61 IVLDHFIPAKDIASANQARISRDFAKKYQMKHFFDEKDMG----------IEHALLPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT GA G F+TG+G+TD F + TG KVP +++ VL G+
Sbjct: 111 LVIPGDVIIGADSHTCTHGALGAFSTGMGSTDLAFAMITGGNWFKVPESIKVVLSGKPGT 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y KD+IL++I I V GA Y+++EFVG+T+ L+M++R ++CNM +EAG K+G+V D
Sbjct: 171 YTTGKDIILEVIRMIGVDGALYRTLEFVGSTIPYLTMDDRFSMCNMAIEAGAKSGIVAYD 230
Query: 310 GTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
T ++L DK L EP YSDE A+++ D++ LEP++A P P N +L++
Sbjct: 231 EITAEFLADK-PLAREPKIHYSDEDATYVQILEIDVAALEPVIAYPFLPSNGHSLSQAVS 289
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
D +KID+ +IGSCT G+ D AA++ +GK+V V + P TQ++ + L
Sbjct: 290 DQIKIDQAFIGSCTNGRLSDLKIAAEIL--NGKRVHPDVRLIVTPGTQRIAREATKL--- 344
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
I +AG ++P+CGACLGG
Sbjct: 345 -----GYMDIIIDAG-GVVSNPTCGACLGG 368
>gi|453053760|gb|EMF01220.1| 3-isopropylmalate dehydratase large subunit [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 422
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 198/350 (56%), Gaps = 16/350 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
++T KI +RA+ + + G+ V + +D+ THD G F FG +A VWD ++I
Sbjct: 5 SMTSKILARAAGRDHVVAGEIVEIAIDMAFTHDPVCEGLRREFHDAFGPDATVWDPDRIA 64
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + D + R + F EQ I + Y + N+ G+CH+ + +EG
Sbjct: 65 LFEDHLVPAKDAESRRLAASMARFAAEQGITHHYPYGE--NY-------GICHVMMCEEG 115
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG V+LGTDSH+ T GAF F +G+G D TG + +VP T+ ++G +P
Sbjct: 116 FVQPGTVVLGTDSHSVTYGAFNAFGSGVGMIDMVNAFYTGDLWFRVPETVEVRIEGVLPP 175
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+LAKD+IL +IG++ + GA+ +S+EF G+TV+ +S+EERMTLCNMVVEAG NG++
Sbjct: 176 GVLAKDVILTLIGDLGLGGASGRSIEFSGSTVDAMSVEERMTLCNMVVEAGAVNGIMSLS 235
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD 367
YL + + Y+PV D A + +L P VA PH PDN R++ D
Sbjct: 236 AAAADYLATRPRTTAYQPVTGDPGAPVARRLEYRAERLRPAVAYPHRPDNVRSIDEAMAD 295
Query: 368 -VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVW 414
+++D+VYIGSCTG K +D AA +G++V V +VPAT ++
Sbjct: 296 RIRVDQVYIGSCTGAKYDDIEVAAAEL--AGRRVAPGVRLMIVPATMGIY 343
>gi|154498019|ref|ZP_02036397.1| hypothetical protein BACCAP_01999 [Bacteroides capillosus ATCC
29799]
gi|150273009|gb|EDN00166.1| 3-isopropylmalate dehydratase, large subunit [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 422
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 209/388 (53%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI ++ + + G + +D+++ +D+ P + F K +++D++K
Sbjct: 2 GMTMTQKILAKHAGLESVEAGQLIEAKLDMVLGNDITTPVAITEFNK--AGLTQIFDKDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I I+ DH D ++ + R+F +I FYD+ +G V H L +
Sbjct: 60 ISIVLDHSTPCKDIKSAQLCAQAREFAKRFDITNFYDVGQMG----------VEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PGE ++G DSHTCT GA G F+TG+G+TD + TG KVP ++ L G+
Sbjct: 110 KGLVAPGETVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGLAWFKVPSAIKVTLKGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
Y+ KD++L +IG+I V GA YKS+EF G V+ L+M++R T+ NM +EAGGKNG+ P
Sbjct: 170 QPYVSGKDVMLHLIGQIGVDGALYKSLEFGGEGVKELAMDDRFTISNMAIEAGGKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL + + +E +D A + E D+ +L P VA PH P N + +
Sbjct: 230 VDDVTRAYLNGRVTREWEAFEADPDAVYEREVVIDLDQLRPTVALPHLPSNTRTVDQVEG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+ I +V IGSCT G+ +D AA++ G+KV V + PATQ++ +D
Sbjct: 290 MPIQQVVIGSCTNGRLKDIKEAAEIL--KGRKVAKGVRCIVFPATQQIMLDAMA------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
Q EAGC ++P+CG CLGG
Sbjct: 342 --AGYIQTLVEAGCAV-STPTCGPCLGG 366
>gi|148642783|ref|YP_001273296.1| 3-isopropylmalate dehydratase large subunit [Methanobrevibacter
smithii ATCC 35061]
gi|148551800|gb|ABQ86928.1| 3-isopropylmalate dehydratase, LeuC [Methanobrevibacter smithii
ATCC 35061]
Length = 417
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 204/392 (52%), Gaps = 35/392 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M +TEKI S A K +++PG+ + + VD+ M+HD P + F+K KVWD EKI
Sbjct: 1 MNITEKILS-AKAKKEVTPGEIIEIPVDLAMSHDGTSPPAIKTFEKVA---TKVWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH + + + + RDF +Q I Y D G+CH L ++
Sbjct: 57 AIVFDHNVPANTIGSAEFQKVCRDFIKKQKITKNYIHGD-----------GICHQVLPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA+G F+TG+G TD V TGK VP ++ + GE+
Sbjct: 106 GLVEPGKVIVGADSHTCTYGAYGAFSTGMGATDLAMVYATGKTWFMVPEAIKMEVSGELN 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y KD+IL+IIGE+ +AGATYK+ EF G T+E++ +E R T+CNM +E G KNG++
Sbjct: 166 SYTAPKDIILKIIGEVGIAGATYKTAEFCGETIEKMGVEGRATICNMAIEMGAKNGIMEP 225
Query: 309 DGTTFKYLEDKT---SLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
+ +Y+ +T V SDE A + E FDI+ +EP +A P+ DN +
Sbjct: 226 NKEVIQYVSQRTGKKESELNIVKSDEDAQYSEEMHFDITDMEPQIACPNDVDNVKDISKV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV----YTLP 421
+ +D+ IGSCT G+ D A ++ + ++PA+ +++ Y
Sbjct: 286 EGTAVDQCLIGSCTNGRLSDLKDAYEILKDNEINNDTRLLILPASAEIYKQAIHEGYIDA 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+G C +P CG CLGG
Sbjct: 346 FIDAGAIIC-------------NPGCGPCLGG 364
>gi|153853733|ref|ZP_01995089.1| hypothetical protein DORLON_01080 [Dorea longicatena DSM 13814]
gi|149753483|gb|EDM63414.1| 3-isopropylmalate dehydratase, large subunit [Dorea longicatena DSM
13814]
Length = 424
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 215/388 (55%), Gaps = 25/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + ++ G + +D++M +D+ GP + IF++ KV+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVTAGQLIEAKLDVVMANDITGPMALPIFRQM---ADKVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ N +R+F Q + ++++ GV H L +
Sbjct: 60 VLVPDHFTPNKDIKSAENSKSIREFAKNQGLSWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + G++ KVP ++FVL G+
Sbjct: 110 GVVAAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMAMGELWFKVPSAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G ++ LSM +R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIKNLSMADRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +YL++ T Y+ +D A + S D+S++ P VA PH P N E +
Sbjct: 230 DEKTEEYLKEHTKKEYKVYEADGDAEYESVVEIDLSEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA + V +VPATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRKAAAILQGHTVHPDVRVMVVPATQKIYKQCIR------ 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AGC +PSCG C+GG
Sbjct: 344 --EGLLEIFVDAGCAV-NTPSCGPCMGG 368
>gi|269793209|ref|YP_003318113.1| homoaconitate hydratase family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100844|gb|ACZ19831.1| homoaconitate hydratase family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 417
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 199/386 (51%), Gaps = 24/386 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A T+ I +R Q G V V VD+ +D+ P + F++ +V+D ++
Sbjct: 2 ARTMIRAIMARNGG--QGEEGQVVKVRVDLAFANDITAPPAITEFRRMGAR--RVFDPDR 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I+PDH+ D + + + R+F EQ + +F P GV H L Q
Sbjct: 58 CAIVPDHFTPPKDMASAEQLKVCREFAREQGLLFF-----------EPGKCGVEHAFLPQ 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG+ PGEV++G DSHTCT GA G TG+G+TD + G +KVPPT+R L+G
Sbjct: 107 EGYVLPGEVVVGADSHTCTMGALGALGTGMGSTDLAAIWALGHTWMKVPPTVRVHLEGSF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD +L IIG + V GA Y+++EF G V LSM+ RMT+ NM +E G K +
Sbjct: 167 KPFVGGKDAMLHIIGTLGVDGARYRALEFHGDGVRSLSMDGRMTMANMGIECGAKAALFV 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+ + +EPVY D A++ E + L PLVA P+ P N ARE +D
Sbjct: 227 PDEATLAYVAPRARRSFEPVYPDPGAAYERELTVRLDSLPPLVACPNLPSNVRPARELRD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
V+I +V+IGSCT G+ ED AAKV V L+PA+++
Sbjct: 287 VEIHQVFIGSCTNGRIEDLRQAAKVLKGRRLHPSVRGVLIPASRRDMAAAMQ-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++F EAG +PSCG CLGG
Sbjct: 339 EGLMEVFMEAGFSI-CTPSCGPCLGG 363
>gi|284161764|ref|YP_003400387.1| homoaconitate hydratase family protein [Archaeoglobus profundus DSM
5631]
gi|284011761|gb|ADB57714.1| homoaconitate hydratase family protein [Archaeoglobus profundus DSM
5631]
Length = 418
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 216/390 (55%), Gaps = 34/390 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIFSRA K + G+ V+ VD+ M +D+ P + F++ G+ V+D +KIV
Sbjct: 4 TITEKIFSRACGK-DVKAGEFVFAPVDMAMANDITAPLAVKAFREIKGKG--VFDPKKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH A N +LR+F E+ + YD+ + G+ H + E
Sbjct: 61 IVFDHQAPADSVTAAENHKMLREFAKEEGV-ILYDVGE-----------GIAH-QIMVEK 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H +PG +++G DSHTCT GA G FATG+G+TD G V +GK+ KVP T+RF ++G++
Sbjct: 108 HVKPGMLVVGADSHTCTYGALGAFATGVGSTDMGCVFASGKLWFKVPETIRFEINGKLGK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL++IG +S GATYK+ EF G V L++ ER+T+CNM VE GGK G+V D
Sbjct: 168 HVYGKDIILKLIGMVSAKGATYKACEFGGEVVRELNVSERLTMCNMAVEMGGKTGIVEPD 227
Query: 310 GTTFKYLED---KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T +YL++ + E + SDE A++ D++ + P VAKPH DN E +
Sbjct: 228 KVTLEYLKEMEIEFDGDVEELRSDEDANYEKIVELDVTDMSPQVAKPHKVDNVVDVEEVE 287
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
KID+V+IGSCT G+ ED A+ + V +VPA+++V++
Sbjct: 288 GTKIDQVFIGSCTNGRYEDLKIASDILEGESVTKGVRLIVVPASKRVYI----------- 336
Query: 427 GKTCSQIFEEAGCDTPAS---PSCGACLGG 453
K E D A P CG C+GG
Sbjct: 337 -KALKDGIIEKLVDAGAIVEFPCCGPCMGG 365
>gi|336436525|ref|ZP_08616237.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007390|gb|EGN37415.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 425
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 211/388 (54%), Gaps = 25/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + IF++ + V+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVKAGQLIMAKLDVVMANDITGPMALPIFRQMADQ---VYDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ N +R+F Q + ++++ GV H L +
Sbjct: 60 VLVPDHFTPNKDIKSAENSKAIREFAKAQGLTWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GVVAAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAVKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 PYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIANLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T YL + T Y +D+ A + D+S++ P VA PH P N E +
Sbjct: 230 DDTAKAYLNEHTKKSYHIYEADQDAEYEETVEIDLSEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
++ID+V IGSCT G+ ED AA + V +VPATQK++
Sbjct: 290 DPIRIDQVVIGSCTNGRMEDMRKAAAILKGHTVHPDVRVMVVPATQKIYKQCIA------ 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC +PSCG C+GG
Sbjct: 344 --EGLLDIFVDAGCAV-NTPSCGPCMGG 368
>gi|220929045|ref|YP_002505954.1| homoaconitate hydratase family protein [Clostridium cellulolyticum
H10]
gi|219999373|gb|ACL75974.1| homoaconitate hydratase family protein [Clostridium cellulolyticum
H10]
Length = 418
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 215/388 (55%), Gaps = 29/388 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG-ENAKVWDREKI 128
TL EKIFS K + G V+ +D+ M D P + F EFG EN + + +KI
Sbjct: 4 TLVEKIFSNKIGKAVYANG-TVFSPIDLAMGTDATIPITIETFN-EFGLEN--IVNPDKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DH++ D + ++++F +QNIK F++I G+CH+ L ++
Sbjct: 60 VLVNDHFVPAKDIATAKFALMMKEFAKKQNIKNFFEI----------GRSGICHVLLPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +P ++++G DSHTCT G F+TG+G+TD V TGK+ +VP T + + GE+P
Sbjct: 110 GFIKPYDIVVGVDSHTCTYGGLSAFSTGVGSTDMACVWATGKLWFRVPETTKIIFSGELP 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKDL L +IG++ + GA Y +EF G ++ L + R+TLCNMV+E G K G++ A
Sbjct: 170 KGVYAKDLALYLIGQLGINGANYDMLEFDGELIKNLDISSRLTLCNMVIEMGAKAGIINA 229
Query: 309 DGTTFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T KY +K +L E + SD A + D+SK+EP++A P+SP N A+E
Sbjct: 230 DAVTQKYFREK-NLKTEDIDFNSDNGARYKKIIEIDVSKIEPVIACPYSPGNIKTAKELV 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
D+KID+V IGSCT G+ EDF A K + +V ++P +Q+V +
Sbjct: 289 DLKIDQVVIGSCTNGRIEDFRVAHKYLKDNEVHHEVKLIVIPGSQEVLKQM--------- 339
Query: 427 GKTCSQIFEEAGCDTPAS-PSCGACLGG 453
+ S + + C S P+CG C+GG
Sbjct: 340 -EEESILIDFIKCGALISPPTCGPCMGG 366
>gi|57234733|ref|YP_181192.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides
ethenogenes 195]
gi|57225181|gb|AAW40238.1| homoaconitate hydratase family protein [Dehalococcoides ethenogenes
195]
Length = 417
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 205/386 (53%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 4 TLAEKILSLKS-GSDASAGDIVVSKVDLAFVQDTTGP----LTVREFWDNGFTKLANPSR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 59 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG G F+TG+G++D GK +VP T++ V+ G
Sbjct: 106 EKLARPGDVIVGADSHTVTAGGLGAFSTGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 166 KHGIYAKDLILYLIGLIGADGATYKALEFSGNVVNNMTIAERLTIANMAVEAGAKVGLFP 225
Query: 308 ADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +DE A + D + LEP+VAKPH+ DN A ARE K
Sbjct: 226 SDRQTLEYLRSVGREADYQPLAADEDAVYERVIEIDATALEPMVAKPHTVDNTATARELK 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + PA+QKV+++ L
Sbjct: 286 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRRHHPQTRLIVTPASQKVYLEAIRL------ 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 340 --GYIEILVQAGANV-MPPGCGACLG 362
>gi|410465532|ref|ZP_11318773.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981425|gb|EKO37995.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 419
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 210/401 (52%), Gaps = 27/401 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI + ++ PG V + +++ +D+ P + FKK A V+D++K+
Sbjct: 4 TLAEKILQQHCDEQITGPGQIVRCRLSLVLANDITAPLAIKSFKKM--GAAGVFDKDKVT 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + V + R+F E I ++++ ++G V H L + G
Sbjct: 62 IVADHFTPNKDIESAEQVKVCREFAKEMGITHYFEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ +L GE+
Sbjct: 112 LVGPGDVVIGADSHTCTYGGLGAFATGMGSTDVAAGMALGETWFKVPPTIQVILTGELRQ 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ AKDL+L +IG I V+GA YK++EF G LS+E RMT+ NM +EAGGK G+ AD
Sbjct: 172 WVGAKDLMLALIGTIGVSGALYKALEFTGPLASALSVEGRMTMSNMAIEAGGKVGLFAAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y + + +D A++ D S +EP +A PH PDN +K
Sbjct: 232 DKTLAYAVAHGRKGDKAIAADAGATYERVVTIDASGMEPQIACPHLPDNVKPVSAVAGLK 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+ IGSCT G+ ED AA + G+KV V T ++PAT +W
Sbjct: 292 VDQAVIGSCTNGRIEDLREAAAIL--KGRKVHKDVRTIVLPATPNIWRQALA-------- 341
Query: 428 KTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC PA +CG CLGG A +A+
Sbjct: 342 EGLIETFMDAGCIVGPA--TCGPCLGGHMGILAGGERAIAT 380
>gi|269839778|ref|YP_003324471.1| 3-isopropylmalate dehydratase [Thermobaculum terrenum ATCC BAA-798]
gi|269791508|gb|ACZ43648.1| 3-isopropylmalate dehydratase [Thermobaculum terrenum ATCC BAA-798]
Length = 413
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 220/424 (51%), Gaps = 58/424 (13%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+E+I SR + Q+ G+ V V VD ++ HD P + F+K G ++D + V
Sbjct: 3 TLSEEILSRKVGR-QVRAGEIVIVPVDYVLAHDQTAPLAIESFRK-IGR--PLFDPNRTV 58
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH I + +A ++R++ EQ I F +G+CH + + G
Sbjct: 59 IVFDHIIPAATVQAATLQKMIREWVREQGITNFLQ-------------EGICHQVMVERG 105
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHTCT GA G F TG+G+TD L TGK L+VP T+RF + GE+
Sbjct: 106 FVTPGAVIVGADSHTCTYGALGAFGTGMGSTDIAVALATGKTWLRVPETIRFEVKGELGH 165
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ AKDL L ++G I V GATY ++E+ G V R+S+ ERMTL NM VE GGK G+V D
Sbjct: 166 HVYAKDLALAMVGTIGVDGATYMAVEYGGPAVRRMSISERMTLANMAVEMGGKTGLVEPD 225
Query: 310 GTTFKYLEDKTSLPYE------PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
T +YL + PYE PVYS D S +EP+VA P P++ A A
Sbjct: 226 DTVDEYLRGRARDPYERITPRDPVYS-------RVVEIDASSIEPMVAVPPDPEHLAPAA 278
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLP 421
E + VKID+V+IG+CT G+ +D AA++ G+K+ T +V PA+ +V ++
Sbjct: 279 EMRKVKIDQVFIGTCTNGRLDDIEIAARIL--KGRKIHPSTRMVVTPASTRVALEAM--- 333
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA---------------RMNEPMA 466
+ Q EAG + CG C+G + A RM +P A
Sbjct: 334 -----ARGYIQTLIEAGA-VVTNTGCGPCIGRHQGVLAAGERAITTQNRNFSGRMGDPTA 387
Query: 467 SLCL 470
+ L
Sbjct: 388 EIYL 391
>gi|357635710|ref|ZP_09133588.1| homoaconitate hydratase family protein [Desulfovibrio sp. FW1012B]
gi|357584264|gb|EHJ49597.1| homoaconitate hydratase family protein [Desulfovibrio sp. FW1012B]
Length = 419
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 210/401 (52%), Gaps = 27/401 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S++ PG V + +++ +D+ P + FKK A V+D++K+V
Sbjct: 4 TLAEKILQAHSDEQVTGPGQIVRCRLSLVLANDITAPLAIKSFKKM--GAAGVFDKDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + V + R+F + ++++ ++G V H L + G
Sbjct: 62 IVADHFTPNKDIASAEQVKVCREFAKAMGLTHYFEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ VL GE+
Sbjct: 112 LVGPGDVVIGADSHTCTYGGLGAFATGMGSTDVAGGMALGETWFKVPPTIQVVLTGELGT 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KDL+L +IG I V+GA YK++EF G LS+E R+T+ NM +EAGGK G+ PAD
Sbjct: 172 YVGGKDLMLALIGAIGVSGALYKALEFTGPLAAALSIEGRLTMSNMAIEAGGKAGLFPAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + +D A++ + + +EP +A PH PDN E +
Sbjct: 232 AKTLEYTAKAGRTGDKLLAADPGAAYERTVTINATGMEPQIACPHLPDNVKPVSEVAGLP 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ IGSCT G+ ED AA + GKKV V ++PAT +W
Sbjct: 292 IDQAVIGSCTNGRIEDLRQAAAIL--KGKKVSRNVRCIVLPATPSIWRQALA-------- 341
Query: 428 KTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC PA +CG CLGG A +A+
Sbjct: 342 EGLIETFMDAGCVVGPA--TCGPCLGGHMGILAGGERAIAT 380
>gi|291541823|emb|CBL14933.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus bromii
L2-63]
Length = 421
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 213/390 (54%), Gaps = 27/390 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + ++ G + +D+++ +DV P + +F++ + V+D K
Sbjct: 2 GMTMSQKILAAHAGLSEVKAGQLIEAKLDMVLGNDVTSPVAINVFEENGATS--VFDNTK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +I DH+ D +A V +R F + +IK + D+ +G + H L +
Sbjct: 60 IAMIMDHFTPNKDIKAATQVKQVRTFADKYDIKNYRDVGQMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA G F+TG+G+TD + +GK KVP ++F + G+
Sbjct: 110 QGLVGPGCLCIGADSHTCTYGALGAFSTGVGSTDMAAGMISGKAWFKVPSAIKFNIVGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG+I V GA YKSMEF G ++ L++++R+ + NM +EAG KNG+ P
Sbjct: 170 QGFVSGKDVILHIIGKIGVDGALYKSMEFTGEGLKYLNIDDRLCIANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-- 365
D T +Y + +DE A + EY D+S L P VA PH P+N E
Sbjct: 230 VDDITREYCNGRYQGTPVEYTADEDAVYDEEYTIDLSALRPTVAFPHLPENTRTVDEIGE 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
K+VKID+ IGSCT G+ D AAA + GKK+ V + P TQ++W+D
Sbjct: 290 KEVKIDQCVIGSCTNGRISDLRAAANIL--KGKKIAKNVRCIIFPGTQQIWLDAMH---- 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CG CLGG
Sbjct: 344 ----EGLFDIFIEAGA-VVSTPTCGPCLGG 368
>gi|163855975|ref|YP_001630273.1| 3-isopropylmalate dehydratase large subunit [Bordetella petrii DSM
12804]
gi|163259703|emb|CAP42004.1| leuC1 [Bordetella petrii]
Length = 420
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 188/347 (54%), Gaps = 17/347 (4%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ + AS + + G+ + VD+ M HD GP +E G +WDR K
Sbjct: 3 AQTLAQKLLAAASGRAAVRVGEILTCKVDLAMFHDSSGPRRLKPMLEELGTG--LWDRSK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ +D+ + R V I RD+ EQ + + YD G+CH+ + +
Sbjct: 61 VVLVMDHYVPEADDESRRIVRIARDWAREQALPHVYD------------SMGICHVVVPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG +G DSH+ T GAFG + G+G+T+ V+ +G++ ++VP TL +G +
Sbjct: 109 HGHIRPGMFCVGGDSHSPTGGAFGAYMFGVGSTEMLGVVASGEIWMRVPDTLMMRWNGRL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E G + G+V
Sbjct: 169 AAGLTAKDMMLHMIGRFGMNGGRYQAIEFCGEAVRALSMQERMTLSNMSAELGAQAGLVA 228
Query: 308 ADGTTFKYLEDKTSLPYE--PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TT +YL + ++ P SD A + FD + LEP VA PHSP N A
Sbjct: 229 PDDTTAQYLRQAGAADFDVTPWQSDADAQ-AQWHEFDATALEPQVAAPHSPANAAPVHAY 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQK 412
+ + YIG+CTG K +D AAA+V V + PA+Q+
Sbjct: 288 GNTPVQVAYIGACTGAKLDDLRAAARVLRGRRIAAGVSLMVAPASQR 334
>gi|330823686|ref|YP_004386989.1| homoaconitate hydratase family protein [Alicycliphilus
denitrificans K601]
gi|329309058|gb|AEB83473.1| homoaconitate hydratase family protein [Alicycliphilus
denitrificans K601]
Length = 426
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 206/400 (51%), Gaps = 37/400 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ RA PQ+ PGD V VD+ M HD GP G +VWD E+IV
Sbjct: 5 TLAQKLVGRACGDPQVQPGDIVTCRVDLAMMHDSGGPRRLKPHLDSLG--VRVWDPERIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ +DE + + V I RD+ EQ I++FYD +G+CH+ G
Sbjct: 63 VVTDHYVPATDEGSAQIVRIARDWVREQGIRHFYD------------EQGICHVVTPSHG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+CT GAFG + GIG T+ V +G++ L+VP T+ G +P
Sbjct: 111 HLRPGMFAVGGDSHSCTGGAFGAYMFGIGATEMLGVAVSGEIWLRVPHTIAMEWTGRLPS 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + G Y+++EF G V LSM ERMTL NM E G + G++ D
Sbjct: 171 GVCAKDMMLYMCTRFGMDGGQYEAVEFCGDAVRALSMNERMTLSNMATELGAQAGLIAPD 230
Query: 310 GTTFKYLEDKTSLPYEPVY------SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
TT ++L+ +P + ++ +DE A L+ +R + L P V+ P SP A
Sbjct: 231 ATTVQWLQ-AAGVPGDALHDMTQWCTDEGAPLLARHRMEAGSLAPQVSAPGSPAQAQDAT 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGK-KVKVPTFLVPAT---QKVWMDVYT 419
++D YIG+CTG K +D AA+VF K V V + PA+ Q+ D
Sbjct: 290 AFAHERLDIAYIGACTGAKLDDLRMAAQVFRGGRKAAVGVRLMVAPASAQDQRQAADEGV 349
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
L Q +AG + + +CGAC G +T+A
Sbjct: 350 L-----------QTLVDAGAELLPN-ACGACAGYGANTFA 377
>gi|94314787|ref|YP_587996.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus
metallidurans CH34]
gi|93358639|gb|ABF12727.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus
metallidurans CH34]
Length = 440
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 183/338 (54%), Gaps = 23/338 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RA+ ++PG V VD+ M+HD GP +E G AKVWD + V
Sbjct: 18 TLAQKLVARAAGVSHVTPGSVVMCKVDLAMSHDSSGPRRVAPLLRELG--AKVWDPSRFV 75
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ +D A + RD+ E I+ F D +G+CH+ L + G
Sbjct: 76 VVTDHYVPAADPEAESILRFTRDWVREAGIQNFID------------NEGICHVVLPERG 123
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG ++G DSH+ T GAFG + GIG T+ VL TG++ L+VP T+R G + D
Sbjct: 124 HILPGRFIVGGDSHSPTGGAFGAYMFGIGATEMAGVLATGEIWLRVPNTIRVEWQGTLSD 183
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + +AG Y+ +E+ G+TV+ LSM+ERMTL NM E G + ++ D
Sbjct: 184 GVCAKDIMLFLCATLGMAGGRYEVIEYTGSTVKTLSMQERMTLTNMSTELGAQTALIAPD 243
Query: 310 GTTFKYLED-----KTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
TT +L D T EP SD A L+ +RFD L P VA PHSP N
Sbjct: 244 ATTMAWLADAGVDAATLAAIEPRQWRSDADAPVLATHRFDAGTLVPQVAAPHSPANSGPV 303
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV 400
+ I+ Y+G+CTG K ED AA+V G+KV
Sbjct: 304 DQAAGAPIEIAYLGACTGAKLEDLRMAARVL--RGRKV 339
>gi|222445722|ref|ZP_03608237.1| hypothetical protein METSMIALI_01364 [Methanobrevibacter smithii
DSM 2375]
gi|288869590|ref|ZP_06409470.1| homoaconitate hydratase [Methanobrevibacter smithii DSM 2374]
gi|222435287|gb|EEE42452.1| 3-isopropylmalate dehydratase, large subunit [Methanobrevibacter
smithii DSM 2375]
gi|288861685|gb|EFC93983.1| homoaconitate hydratase [Methanobrevibacter smithii DSM 2374]
Length = 420
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 204/392 (52%), Gaps = 35/392 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
+ +TEKI S A K +++PG+ + + VD+ M+HD P + F+K KVWD EKI
Sbjct: 4 LNITEKILS-AKAKKEVTPGEIIEIPVDLAMSHDGTSPPAIKTFEKVA---TKVWDNEKI 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
I+ DH + + + + RDF +Q I Y D G+CH L ++
Sbjct: 60 AIVFDHNVPANTIGSAEFQKVCRDFIKKQKITKNYIHGD-----------GICHQVLPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG+V++G DSHTCT GA+G F+TG+G TD V TGK VP ++ + GE+
Sbjct: 109 GLVEPGKVIVGADSHTCTYGAYGAFSTGMGATDLAMVYATGKTWFMVPEAIKMEVSGELN 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y KD+IL+IIGE+ +AGATYK+ EF G T+E++ +E R T+CNM +E G KNG++
Sbjct: 169 SYTAPKDIILKIIGEVGIAGATYKTAEFCGETIEKMGVEGRATICNMAIEMGAKNGIMEP 228
Query: 309 DGTTFKYLEDKT---SLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
+ +Y+ +T V SDE A + E FDI+ +EP +A P+ DN +
Sbjct: 229 NKEVIQYVSQRTGKKESELNIVKSDEDAQYSEEMHFDITDMEPQIACPNDVDNVKDISKV 288
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDV----YTLP 421
+ +D+ IGSCT G+ D A ++ + ++PA+ +++ Y
Sbjct: 289 EGTAVDQCLIGSCTNGRLSDLKDAYEILKDNEINNDTRLLILPASAEIYKQAIHEGYIDA 348
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+G C +P CG CLGG
Sbjct: 349 FIDAGAIIC-------------NPGCGPCLGG 367
>gi|320530535|ref|ZP_08031592.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas artemidis
F0399]
gi|320137208|gb|EFW29133.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas artemidis
F0399]
Length = 420
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 209/387 (54%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + G V +D+++ +DV GP S KEF + + V+DREK
Sbjct: 3 MNMSEKILARHAGLDVVEAGQLVTCELDMVLANDVTGPPSI----KEFEKTGRPVFDREK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D +++ I+RDF + +I ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSSELAKIMRDFARKHDILHYYEQGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 109 KGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+ P
Sbjct: 169 PADISGKDVILTLIGTIGVDGALYRSLEFTGEGVAELTMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
D Y+ + + + P +D A + D+ L P+VA PH P+N R + +
Sbjct: 229 YDDVCRDYVAGRMAADFTPAEADPDAVYAQTVEIDLGVLRPVVAFPHLPENTRRVMDLAE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
V ID+V IGSCT G+ ED AA++ V ++P + V+ + S
Sbjct: 289 PVAIDQVVIGSCTNGRLEDMEIAAEILKGHTVHPNVRCIVIPGSPWVYQE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 341 RRGYLEIFMEAGAAV-STPTCGPCLGG 366
>gi|357420649|ref|YP_004933641.1| homoaconitate hydratase [Thermovirga lienii DSM 17291]
gi|355398115|gb|AER67544.1| homoaconitate hydratase family protein [Thermovirga lienii DSM
17291]
Length = 420
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 219/390 (56%), Gaps = 28/390 (7%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+ MT+ EKI ++ S+K ++ PG+ + ++D D+ P + +F E G +V+D
Sbjct: 2 SGMTIAEKILAKHSQKEKVKPGEFILADIDFAFGSDITFPIAMEVFNNEIGAE-EVFDPT 60
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++ I+ DHY D + N +R+F + F+ I G +G+ H+ +
Sbjct: 61 RVGIVLDHYYPAKDTASASNHKAMREFA-----EKFHLISLEG--------EGIEHVIIH 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+++G DSHT T GA FATG+G+TD + GK+ L+VP +++ VL G+
Sbjct: 108 EKGFVAPGELIIGADSHTTTYGALAAFATGVGSTDLAAAMVLGKIWLQVPESIKVVLKGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+++ KD+IL +IGEI V+GATY +EF G ++ LS+++R T+ NM +EAG K G+
Sbjct: 168 PGKWVMGKDIILHVIGEIGVSGATYNVLEFSGEGLKHLSIDDRFTISNMAIEAGAKAGIF 227
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T KY+E++ + Y SDE+A + E ++S+L P+VA P+SP N + K
Sbjct: 228 AFDEITRKYIENRLNRKYVVYESDEEADYKQEIEINLSELRPVVAMPNSPGNARCIDDVK 287
Query: 367 D-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP 423
+ ++I++V IGSCT G+ D L A+++ G+K+ KV + P + ++++
Sbjct: 288 EKIRINQVVIGSCTNGRYSDLLVASQIL--EGRKIHPKVRVLVFPGSNEIYLKAIK---- 341
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + EAG PSCG C GG
Sbjct: 342 ----EGVIEKLIEAGASI-GFPSCGPCFGG 366
>gi|346307594|ref|ZP_08849726.1| 3-isopropylmalate dehydratase large subunit [Dorea formicigenerans
4_6_53AFAA]
gi|345904943|gb|EGX74684.1| 3-isopropylmalate dehydratase large subunit [Dorea formicigenerans
4_6_53AFAA]
Length = 425
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 210/393 (53%), Gaps = 35/393 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + I K+ + V+D+ K+
Sbjct: 3 MTMTQKILAAHAGMDHVEAGQLIEAKLDVVMANDITGPMALPILKQM---SDTVFDKNKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH+ D ++ N +R+F Q + ++++ GV H L +
Sbjct: 60 VFVPDHFTPNKDIKSAENSKAIREFAKAQGLHWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE+++G DSHTCT GA G F+TG+G TD + G++ KVP ++FVL G+
Sbjct: 110 GVVAAGELIIGADSHTCTYGALGAFSTGVGTTDIATGMAMGELWFKVPAAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIANLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +YL + T Y +DE A + D++++ P VA PH P N E +
Sbjct: 230 DDKTIQYLNEHTKKEYTVYEADEDAEYEQVVEIDLAEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA + V ++PATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRKAAAILKGHKVHEDVRVMVIPATQKIY----------- 338
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C IF +AGC +PSCG C+GG
Sbjct: 339 --KQCIHEGLMDIFVDAGCAVN-TPSCGPCMGG 368
>gi|121534904|ref|ZP_01666723.1| 3-isopropylmalate dehydratase [Thermosinus carboxydivorans Nor1]
gi|121306503|gb|EAX47426.1| 3-isopropylmalate dehydratase [Thermosinus carboxydivorans Nor1]
Length = 417
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 205/386 (53%), Gaps = 27/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI ++A+ K ++ G+ V VD+ +D+ F E G KV+D KI
Sbjct: 1 MHAIEKILAKAAGKDHVATGEIVNCKVDLAGINDLYLQTIRSFF--EMG-GKKVFDPSKI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DHY S N R+F EQ I D+ +GVCH LA +
Sbjct: 58 VIFLDHYAPASTIMQADNQKQFREFAWEQGIDKLMDVD-----------QGVCHQVLADK 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG VL+ TDSHT T GAFG F TG+G TD ++ TG + +VP +R L+GE+P
Sbjct: 107 GLVYPGMVLVVTDSHTTTHGAFGAFGTGVGATDLATIMITGHLWFRVPEIVRINLEGELP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL++IG + A YK++EF G +++LS+ ERM LCNM E G K +
Sbjct: 167 KGVYAKDIILKVIGTLGADYAVYKAVEFTGPVLKQLSVSERMALCNMTTEMGAKTSYIQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL+DK YE ++D + +E+ FD+S L+P VA PHS DN E
Sbjct: 227 DEITLEYLKDKVKGDYEIFHTDPGYQYAAEHTFDVSGLKPQVAAPHSVDNVHDITEYIGR 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSG 426
+ + ++G+CTGG+ +D AAK+ GKKV T +VPA++ V+++
Sbjct: 287 PVQQAFLGTCTGGRVQDLAVAAKIL--KGKKVHPRTRFIVVPASKAVFLEAME------- 337
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K Q EAG T +P C ACLG
Sbjct: 338 -KGYIQTLVEAGA-TFVTPGCAACLG 361
>gi|270307816|ref|YP_003329874.1| aconitase/homoaconitase/3-isopropylmalate dehydratase, large
subunit [Dehalococcoides sp. VS]
gi|270153708|gb|ACZ61546.1| aconitase/homoaconitase/3-isopropylmalate dehydratase, large
subunit [Dehalococcoides sp. VS]
Length = 417
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 204/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 4 TLAEKILSLKS-GSDASAGDIVVSKVDLAFVQDTTGP----LTVREFWDNGFTKLANPSR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 59 TALFLDHAAPSPQRQLSTDHILLRKFAQDTGALIF----DVG--------EGVCH-QLVA 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG G F+TG+G++D GK +VP T++ V++G
Sbjct: 106 EKLARPGDVIVGADSHTVTAGGLGAFSTGMGSSDIAVAFALGKTWFRVPETIKVVVNGRF 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKDLIL +IG I GATYK++EF G V + + ER+T+ NM VEAG K G+ P
Sbjct: 166 KHGIYAKDLILHLIGLIGADGATYKALEFSGNVVNNMMIAERLTIANMAVEAGAKVGLFP 225
Query: 308 ADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +DE A + D + LEP V+KPH+ DN A ARE K
Sbjct: 226 SDRQTLEYLRSVGREADYQPLAADENAVYERVIEIDATALEPTVSKPHTVDNTATARELK 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + PA+QKV+++ L
Sbjct: 286 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRRHHPQTRLIVTPASQKVYLEAIRLGY---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 342 ----IEILVQAGANI-MPPGCGACLG 362
>gi|166032642|ref|ZP_02235471.1| hypothetical protein DORFOR_02357 [Dorea formicigenerans ATCC
27755]
gi|166026999|gb|EDR45756.1| 3-isopropylmalate dehydratase, large subunit [Dorea formicigenerans
ATCC 27755]
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 210/393 (53%), Gaps = 35/393 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + I K+ + V+D+ K+
Sbjct: 3 MTMTQKILAAHAGLDHVEAGQLIEAKLDVVMANDITGPMALPILKQM---SDTVFDKNKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH+ D ++ N +R+F Q + ++++ GV H L +
Sbjct: 60 VFVPDHFTPNKDIKSAENSKAIREFAKAQGLHWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE+++G DSHTCT GA G F+TG+G TD + G++ KVP ++FVL G+
Sbjct: 110 GVVAAGELIIGADSHTCTYGALGAFSTGVGTTDIATGMAMGELWFKVPAAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 KYVSGKDIIIHIIGKIGVDGALYKSMEFTGDGIANLSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D T +YL + T Y +DE A + D++++ P VA PH P N E +
Sbjct: 230 DDKTIQYLNEHTKKEYTVYEADEDAEYEQVVEIDLAEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+KID+V IGSCT G+ ED AA + V ++PATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRKAAAILKGHKVHEDVRVMVIPATQKIY----------- 338
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C IF +AGC +PSCG C+GG
Sbjct: 339 --KQCIHEGLMDIFVDAGCAVN-TPSCGPCMGG 368
>gi|269139380|ref|YP_003296081.1| 3-isopropylmalate dehydratase large subunit [Edwardsiella tarda
EIB202]
gi|387867967|ref|YP_005699436.1| homoaconitate hydratase family protein [Edwardsiella tarda FL6-60]
gi|267985041|gb|ACY84870.1| 3-isopropylmalate dehydratase large subunit [Edwardsiella tarda
EIB202]
gi|304559280|gb|ADM41944.1| homoaconitate hydratase family protein [Edwardsiella tarda FL6-60]
Length = 421
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 206/386 (53%), Gaps = 26/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + + ++S GD VWVNVD M D+ GP I ++ + R+++V
Sbjct: 4 TIAEKIIAEKAGVTEVSAGDVVWVNVDKAMMDDILGP-RVQIAEQMEMLKMPILYRDRVV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DHY ++ R V RD+ + I +++ +KG CH + +EG
Sbjct: 63 VISDHYTPPANTRQADIVKFTRDWSRDHGISNYHE------------FKGPCHQIMVEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG ++LGTDSHTC GA G FA+G+G+T+ +L TGK LKVP T + +G++
Sbjct: 111 HVLPGTLILGTDSHTCMGGALGAFASGVGSTEMLGILVTGKTWLKVPETQKVEWNGKLQP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++AKD+ L+ IG I AGATY S+EF G+T + +E+RM + NM VE G K G++P D
Sbjct: 171 GVMAKDISLKTIGRIGHAGATYHSVEFCGSTFADMPIEQRMAITNMAVEMGAKVGLMPVD 230
Query: 310 GTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+YLE ++ Y+ D A +++ F+ L P +A PH+ DN
Sbjct: 231 RLAQEYLESMGISAKQYKIYQPDADAHYINTLHFNAEDLPPQIACPHNVDNVTDIINVAG 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV-PATQKVWMDVYTLPVPGSG 426
KID+ Y+GSCTGG+ D AAA FL K FLV PA+QK+W +
Sbjct: 291 KKIDQAYLGSCTGGRYSDLEAAAN-FLKGKKIASGIRFLVSPASQKIWQK--------AS 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+AG T +P+CG C+G
Sbjct: 342 HDGILSTLADAGA-TILAPTCGVCVG 366
>gi|147918945|ref|YP_687329.1| 3-isopropylmalate dehydratase, large subunit [Methanocella
arvoryzae MRE50]
gi|110622725|emb|CAJ38003.1| 3-isopropylmalate dehydratase, large subunit [Methanocella
arvoryzae MRE50]
Length = 418
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 211/390 (54%), Gaps = 36/390 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S S K +PGD V V VD + +HD P + +KE KV+D EK+
Sbjct: 4 TLAEKILSAKSGK-DCAPGDIVTVPVDFVFSHDGTMPLAIQQMEKEL-NTRKVFDPEKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + E+ + +R F E N+ YF++ D G+CH +A E
Sbjct: 62 GVCDHASPSPSEQVSNVQIFMRKFAKENNMPYFFENGD-----------GICHQIVA-EK 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT GA F TG+G+TD G ++ G L+VP +F ++GE+P
Sbjct: 110 FSAPGKIIIGGDSHTCTHGALAAFGTGMGSTDVGAIMAYGTTWLRVPEAFKFDINGELPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ +KD+ L I+ EI+ GATY SMEF+G TV+ +S+E R+ + NM +EAGGK G+ AD
Sbjct: 170 YVTSKDVFLHIVREITADGATYMSMEFMGDTVKNMSVESRLVMSNMAIEAGGKVGLCAAD 229
Query: 310 GTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
++L Y+P+ +D A + +E + D +KLEPL+A PH DN E +
Sbjct: 230 EKVRQFLAKYGREHEYKPLAADPDAHYANELQVDATKLEPLIAYPHRVDNVKPVSEFAGM 289
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDV----YTLPV 422
++D+V IGSCT G+ ED AA++ GKKV T LV A++ V ++ Y +
Sbjct: 290 ELDQVCIGSCTNGRLEDLKVAAEIL--KGKKVHKDTRLVVYAASRGVMLEAMQAGYIQTL 347
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+G C P CG C+G
Sbjct: 348 VEAGAAVC-------------PPGCGFCIG 364
>gi|225569119|ref|ZP_03778144.1| hypothetical protein CLOHYLEM_05199 [Clostridium hylemonae DSM
15053]
gi|225161918|gb|EEG74537.1| hypothetical protein CLOHYLEM_05199 [Clostridium hylemonae DSM
15053]
Length = 431
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 212/388 (54%), Gaps = 25/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + +F + KV+DREK+
Sbjct: 10 MTMTQKILAAHAGLDHVEAGQLIEAKLDVVMANDITGPMAVPVFNQMAD---KVFDREKV 66
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ N +R+F Q + ++Y++ +G + H L ++
Sbjct: 67 VLVPDHFTPNKDIKSAENSKSIREFARAQGLTHYYEVGQMG----------IEHALLPEK 116
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL +
Sbjct: 117 GITVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLSNKPS 176
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG+I V GA YKSMEF G + LSM++R T+ NM +EAG KNG+
Sbjct: 177 RYVSGKDIIIHIIGKIGVDGALYKSMEFTGKGISNLSMDDRFTMANMAIEAGAKNGIFIV 236
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D Y+++ + Y +DE A + D+SK+ P VA PH P N E +
Sbjct: 237 DEQAETYMKEHSDKSYTIYEADEDAVYDEVVEIDLSKVRPTVAFPHLPGNAKTIDEIEAM 296
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
V+ID+V IGSCT G+ ED AA V V ++PATQK++ +
Sbjct: 297 EPVRIDQVVIGSCTNGRMEDMRRAAAVLKGHKVHPDVRAMIIPATQKIYKQCIS------ 350
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF +AGC +PSCG C+GG
Sbjct: 351 --EGLVDIFIDAGC-AFNTPSCGPCMGG 375
>gi|256811171|ref|YP_003128540.1| 3-isopropylmalate dehydratase [Methanocaldococcus fervens AG86]
gi|256794371|gb|ACV25040.1| 3-isopropylmalate dehydratase [Methanocaldococcus fervens AG86]
Length = 420
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 221/401 (55%), Gaps = 37/401 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL E+I S+ ++ GD++ V VD+ MTHD P ++ K E G+ VWD EKI
Sbjct: 1 MTLIEEILSKKV-GYEVCAGDSIEVKVDLAMTHDGTTPLTYKALK-EMGDG--VWDNEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DH + + +A ++ +F NIK+F+ +G+CH LA E
Sbjct: 57 VIAFDHNVPANTVKAAEMQKLVLEFVKRFNIKHFH-----------KGGEGICHQILA-E 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ P + G DSHTCT GAFG FATG G TD ++ TG+ +KVP T+R + G+
Sbjct: 105 NYVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGEAWIKVPKTIRVDIVGKNE 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD++L++ EI GATY ++E+ G V+R++M+ R+TLCNM +E GGK GV+ A
Sbjct: 165 N-ISAKDIVLRVCKEIGRRGATYMAIEYGGEVVKRMNMDGRLTLCNMAIEMGGKTGVIEA 223
Query: 309 DGTTFKYLEDKTSLPYEPV---------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
D T+ YL+++ L E + + ++A++ E DI+ +E VA PH PDN
Sbjct: 224 DEITYNYLKNERGLSDEKIAELKKERITVNKDEANYYREIEIDITDMEEQVAVPHHPDNV 283
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK-VPTFLVPATQKVWMDVY 418
E + +I++V+IGSCT G+ D AAK +L GK K V ++PA++KV++
Sbjct: 284 KPVSEVEGTEINQVFIGSCTNGRLSDLREAAK-YLKGGKVHKDVKLIVIPASKKVFLQAL 342
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ + F +AG +P CG CLG + A
Sbjct: 343 R--------EGLIETFIKAGA-MICTPGCGPCLGAHQGVLA 374
>gi|430808671|ref|ZP_19435786.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus sp. HMR-1]
gi|429498934|gb|EKZ97410.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus sp. HMR-1]
Length = 440
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 184/344 (53%), Gaps = 25/344 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RA+ ++PG V VD+ M+HD GP +E G AKVWD + V
Sbjct: 18 TLAQKLVARAAGVSHVTPGSVVMCKVDLAMSHDSSGPRRVAPLLRELG--AKVWDPSRFV 75
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ +D A + RD+ E I+ F D +G+CH+ L + G
Sbjct: 76 VVTDHYVPAADPEAESILRFTRDWVREAGIQNFID------------NEGICHVVLPERG 123
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG ++G DSH+ T GAFG + GIG T+ VL TG++ L+VP T+R G + D
Sbjct: 124 HVLPGRFIVGGDSHSPTGGAFGAYMFGIGATEMAGVLATGEIWLRVPNTIRVEWQGTLSD 183
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + +AG Y+ +E+ G V+ LSM+ERMTL NM E G + ++ D
Sbjct: 184 GVCAKDVMLFLCATLGMAGGRYEVIEYTGNAVKTLSMQERMTLTNMSTELGAQTALIAPD 243
Query: 310 GTTFKYLED-----KTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
TT +L D T EP SD A L+ +RFD L P VA PHSP N
Sbjct: 244 ATTMAWLADAGVDAATLAAIEPRQWRSDADAPVLATHRFDAGTLVPQVAAPHSPANSGPV 303
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKV 402
+ I+ Y+G+CTG K ED AA+V +ASG +KV
Sbjct: 304 DQAAGAPIEIAYLGACTGAKLEDLRMAARVLRGRKVASGVSLKV 347
>gi|357038656|ref|ZP_09100453.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355359448|gb|EHG07210.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 420
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 210/387 (54%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI + + K ++ G+ + V VD++M D+ I + + K++D KI
Sbjct: 1 MTIVEKILAAHAGKQSVTSGEFINVKVDLVMASDLTA--HISINQLQALGIRKLFDPSKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V + DH+ D A + +R+F E + F + D+G + H+ L ++
Sbjct: 59 VFVMDHFTPNKDVAAAMEIKKMREFARELGVN-FIEAGDIG----------IEHVYLPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSHTCT GA G F+TG+G+TD + TG++ +KVPPT++++ +G+
Sbjct: 108 GLVLPGEVVVGGDSHTCTYGALGAFSTGMGSTDIAVAMATGEIWMKVPPTIKYMFNGKTG 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KDLIL IG+I V GA Y +MEF G + +SM+ R T+ NM +EAG K G+
Sbjct: 168 KWVTGKDLILYTIGQIGVDGALYSAMEFTGEAIRDMSMDGRFTMANMAIEAGAKTGIFEV 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y +++ + P+ +D+ + ++ ++EP VA PHSP N + D+
Sbjct: 228 DEKTLAYAQERANRPFTVCKNDDSDEYAQVIEYNAEEIEPQVALPHSPSNVVPVEKAGDI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V IGSCT G+ ED A V G+KV V ++P +QKV++D
Sbjct: 288 EVDQVVIGSCTNGRLEDLYYAHLVM--QGRKVSKNVRCIVIPGSQKVYLDALR------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F AG + P+CG C+GG
Sbjct: 339 -AGYIETFVMAGA-LVSPPTCGPCVGG 363
>gi|402302359|ref|ZP_10821474.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
FOBRC9]
gi|400380766|gb|EJP33578.1| 3-isopropylmalate dehydratase, large subunit [Selenomonas sp.
FOBRC9]
Length = 420
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 208/387 (53%), Gaps = 25/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M ++EKI +R + + G V +D+++ +DV GP S KEF + + V+DREK
Sbjct: 3 MNMSEKILARHAGLDVVEAGQLVTCELDMVLANDVTGPPSI----KEFEKTGRPVFDREK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I +IPDH+ D +++ I+RDF +I ++Y+ +G + H+ L +
Sbjct: 59 IALIPDHFQPAKDIKSSELAKIMRDFARRHDILHYYEQGRVG----------IEHVLLPE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG + +G DSHTCT GA F+TG+G TD + TG+ KVP + L G+
Sbjct: 109 KGIVGPGMLTIGADSHTCTYGAVNGFSTGVGTTDLAVGMATGEAWFKVPEAINVHLTGKK 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + KD+IL +IG I V GA Y+S+EF G V L+M +R+T+ NM +EAG KNG+ P
Sbjct: 169 PADISGKDVILTLIGTIGVDGALYRSLEFTGEGVAELTMTDRLTIANMAIEAGAKNGIFP 228
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK 366
D Y+ + + + P +D A + D+ L P+VA PH P+N R + +
Sbjct: 229 YDDVCRDYVAGRMAADFTPAEADPDAVYAQTVEIDLGVLRPVVAFPHLPENTRRVMDLAE 288
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
V ID+V IGSCT G+ ED AA++ V ++P + V+ + S
Sbjct: 289 PVAIDQVVIGSCTNGRLEDMEIAAEILRGHTVHPNVRCIVIPGSPWVYQE--------SM 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF +AG ++P+CG CLGG
Sbjct: 341 KRGYLEIFMDAGAAV-STPTCGPCLGG 366
>gi|15806779|ref|NP_295501.1| 3-isopropylmalate dehydratase large subunit [Deinococcus
radiodurans R1]
gi|22001725|sp|Q9RTI6.1|LEUC2_DEIRA RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|6459551|gb|AAF11331.1|AE002019_4 3-isopropylmalate dehydratase, large subunit [Deinococcus
radiodurans R1]
Length = 431
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 218/421 (51%), Gaps = 43/421 (10%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EK+ + S + PG + D ++ H++ P + + + E G + +V+D +KI
Sbjct: 3 MTIAEKMLAAHSGHDTVVPGQLIECATDWVLCHEITTPAALRMLE-ERGMD-RVFDPQKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V +PDH + + +A + L+ + E+ I++FYD+ G+ H+ L
Sbjct: 61 VAVPDHSVPAMNIKAAKMYQKLKSWVQEKGIEHFYDVG----------RGGIAHVVLENT 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +PG+ L+ DSHTC AGA G FATG+G+TD + GKV KVP T+ + G+
Sbjct: 111 GLMKPGQTLVSGDSHTCNAGALGAFATGVGSTDLAGAIYAGKVWFKVPETMLIRVTGKTN 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD++L++I +I GA Y ME+VG +++L ME R TL NM +EAGGK G+V
Sbjct: 171 PGVTPKDIVLEVIKQIGADGANYMVMEWVGDYIDQLDMEGRFTLTNMAIEAGGKTGIVAV 230
Query: 309 DGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D TT Y++ + P Y SD A + D +++EP VA PH P N +A +
Sbjct: 231 DDTTRAYMQQRGVSPEQYTEYQSDPDAKYKVVVEIDAAQVEPTVAYPHIPSNGRVAGSDR 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
+++ Y+GSCT G+ D A++ G+KV V +VPATQ +W
Sbjct: 291 -IRVTHAYVGSCTNGRITDLRDVARIL--KGRKVAQDVQMIVVPATQAIWKQ-------- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLC 469
+ + +IF +AG + PSCGACLG GP D RM +P A +
Sbjct: 340 AAQEGLLEIFVDAGASV-SYPSCGACLGMHSGVLGPDDICISSSNRNFVGRMGDPSAQIY 398
Query: 470 L 470
L
Sbjct: 399 L 399
>gi|389873612|ref|YP_006381031.1| 3-isopropylmalate dehydratase large subunit [Advenella kashmirensis
WT001]
gi|388538861|gb|AFK64049.1| 3-isopropylmalate dehydratase large subunit [Advenella kashmirensis
WT001]
Length = 425
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 201/389 (51%), Gaps = 29/389 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ +RAS + +++ + V VD+ M HD GP ++ G ++WD+ K
Sbjct: 3 AQTLAQKLIARASHRQEVAVNEIVTCAVDLAMFHDSSGPRRLKPMLEKLG--GQIWDKSK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ D+ + R + I RD+ EQ + YD G+CH+ L Q
Sbjct: 61 VVLVMDHYVPEEDDDSRRILKIARDWASEQQLPNVYD------------SIGICHVVLPQ 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+GH PG +G DSH+ T GAFG + GIG+T+ V+ TG++ ++ PPT+ G +
Sbjct: 109 KGHLSPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVVVTGEIWVRTPPTIAMDWSGLL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + AKD++L +IG GA Y ++E+ G+ V LSM+ERMTL NM E G + G++
Sbjct: 169 PAGVTAKDMMLHMIGLYGTNGANYAAVEYTGSAVSALSMQERMTLSNMSAELGAQVGLIA 228
Query: 308 ADGTTFKYLED---KTSLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDNRALAR 363
D TT YL + + SD+ A E R FD S L P+VA PHSPDN
Sbjct: 229 PDQTTLDYLASVGVNADVDLDYWRSDDAAQ--REVRSFDASTLSPMVAAPHSPDNVHPVD 286
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
+D+ + YIG+CTG K ED AAA V V + PAT + D
Sbjct: 287 HMRDIPVQVAYIGACTGAKLEDLRAAATVLKGQRVDSGVRLMVAPATLRDQQDAQD---- 342
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ I AG A+ SCGAC G
Sbjct: 343 ----EGIMDILVNAGAQVFAT-SCGACSG 366
>gi|291529832|emb|CBK95417.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium siraeum
70/3]
Length = 418
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 214/388 (55%), Gaps = 24/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKE-FGENAKVWDRE 126
MT+++KI ++ + + G + +D+++ +D+ P + F K FG +++++
Sbjct: 2 GMTMSQKILAKHAGLESVREGQLIRAKLDMVLGNDITSPVAINEFNKAGFG---GIFNKD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++ DH+ D +A R+F + +I +YD+ ++G + H L
Sbjct: 59 KISLVMDHFTPNKDIKAATQCKQCREFAGKYDITNYYDVGEMG----------IEHALLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+ +G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G+
Sbjct: 109 EKGLIGPGELCIGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPSAIKFNLTGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ Y+ KD+IL IIG I V GA Y+SMEF G ++ LS+++R+ + NM +EAG KNG+
Sbjct: 169 LNKYVSGKDVILHIIGMIGVDGALYQSMEFTGEGLKSLSIDDRLCIANMAIEAGAKNGIF 228
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
D T Y++++ ++ +DE A + D+S ++ V+ PH P+N E
Sbjct: 229 EVDEITMAYMKERADRDFDIFKADEDAVYSRVIDIDLSTVKQTVSFPHLPENTKTVDEIT 288
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+D+KID+ IGSCT G+ D AA++ V ++P TQKV++
Sbjct: 289 EDIKIDQAVIGSCTNGRISDMRIAAEILKGKHIAKGVRCIVIPGTQKVYLQCIK------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++IF AGC ++P+CG CLGG
Sbjct: 343 --EGLAEIFVNAGC-VLSTPTCGPCLGG 367
>gi|124485432|ref|YP_001030048.1| 3-isopropylmalate dehydratase, large subunit [Methanocorpusculum
labreanum Z]
gi|124362973|gb|ABN06781.1| 3-isopropylmalate dehydratase, large subunit [Methanocorpusculum
labreanum Z]
Length = 392
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 199/359 (55%), Gaps = 23/359 (6%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
VD M HD+ GP + + K+ G V+D +K++++ DH I A N ++R F
Sbjct: 4 VDGAMIHDITGPLAINVMKEMGG--GSVFDPKKVIMLFDHQIPADSISAAENHVMMRTFA 61
Query: 155 MEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 214
EQ I Y YDIK+ GVCH + ++G +PG++++G+DSHTC GA G F+
Sbjct: 62 REQGI-YNYDIKE-----------GVCHQVVPEKGRVKPGDIVVGSDSHTCAYGALGAFS 109
Query: 215 TGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSM 274
TGIG+TD +VL G++ +VP T+R +G+ + + KDLIL + G+I GATY+++
Sbjct: 110 TGIGSTDMAYVLKFGELYFRVPETIRINANGKFQNRVGPKDLILTLAGDIGADGATYRAL 169
Query: 275 EFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKAS 334
EF G + + RMT NM +E G K G+VP D T++Y+ +T + + SDE A
Sbjct: 170 EFCGNAFSEMDIPGRMTCANMAIEMGAKAGIVPPDEKTWEYMRGRTEVTPFSLASDEDAV 229
Query: 335 FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFL 394
F +DI+K+ P +A PH+ DN E +D+V+IGSCT G+ EDF AA+V
Sbjct: 230 FFETRNYDIAKINPKIAVPHNVDNVVDVTEVAGKPVDQVFIGSCTNGRYEDFAEAAEVLG 289
Query: 395 ASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ V +VPA++ +M V + + F EAG A P CG C+GG
Sbjct: 290 DNVFSEDVRVIMVPASKAEYMKVLKAGL--------IEKFVEAGALVEA-PCCGPCMGG 339
>gi|421062750|ref|ZP_15524830.1| aconitate hydratase domain-containing protein, partial [Pelosinus
fermentans B3]
gi|392439125|gb|EIW16860.1| aconitate hydratase domain-containing protein, partial [Pelosinus
fermentans B3]
Length = 314
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 197/324 (60%), Gaps = 15/324 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI R +++ ++PG+ + VNVD +M HD+ P F++ E KVW+ +KIV
Sbjct: 4 TLTEKIIMRNTKRSSVTPGELLNVNVDRVMVHDIFAPFVVEKFREMGFE--KVWNPDKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + TS R+ I F EQ+IK + +A+ GVCH + +
Sbjct: 62 FVYDHLVPTSFIEDFRHHKIADAFAAEQHIKAVH--------RAD----GVCHQLMPELR 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ GTDSHT T GA G F+TGIG T+ + GTG++ +KVPPTL+F ++GE+P
Sbjct: 110 YVVPGQVVFGTDSHTTTYGAIGSFSTGIGYTEMAAIFGTGQLWIKVPPTLKFTINGELPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+I+G+I G TYK++EF G+T++ LS+ RMTL NM VEAG K GV+ D
Sbjct: 170 GVYSKDIILRILGDIGADGGTYKALEFGGSTIKGLSISSRMTLSNMAVEAGAKVGVIEPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF + + S ++ + SD AS+ + +D S +P+VA P + DN + K
Sbjct: 230 EKTFAFSGVEGS-QFQDLKSDPDASYEKVFNYDASTFKPVVACPSNVDNISDVEALLGSK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVF 393
ID+ +IGSCT G+ ED AAK+
Sbjct: 289 IDQGFIGSCTNGRFEDLEVAAKIL 312
>gi|167749683|ref|ZP_02421810.1| hypothetical protein EUBSIR_00641 [Eubacterium siraeum DSM 15702]
gi|167657306|gb|EDS01436.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium siraeum
DSM 15702]
gi|291556452|emb|CBL33569.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium siraeum
V10Sc8a]
Length = 418
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 214/388 (55%), Gaps = 24/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKE-FGENAKVWDRE 126
MT+++KI ++ + + G + +D+++ +D+ P + F K FG +++++
Sbjct: 2 GMTMSQKILAKHAGLESVREGQLIRAKLDMVLGNDITSPVAINEFNKAGFG---GIFNKD 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++ DH+ D +A R+F + +I +YD+ ++G + H L
Sbjct: 59 KISLVMDHFTPNKDIKAATQCKQCREFAGKYDITNYYDVGEMG----------IEHALLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PGE+ +G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G+
Sbjct: 109 EKGLIGPGELCIGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPSAIKFNLTGK 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ Y+ KD+IL IIG I V GA Y+SMEF G ++ LS+++R+ + NM +EAG KNG+
Sbjct: 169 LNKYVSGKDVILHIIGMIGVDGALYQSMEFTGDGLKSLSIDDRLCIANMAIEAGAKNGIF 228
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC- 365
D T Y++++ ++ +DE A + D+S ++ V+ PH P+N E
Sbjct: 229 EVDEITMAYMKERADRDFDIFKADEDAVYSRVIDIDLSTVKQTVSFPHLPENTKTVDEIT 288
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+D+KID+ IGSCT G+ D AA++ V ++P TQKV++
Sbjct: 289 EDIKIDQAVIGSCTNGRISDMRIAAEILKGKHIAKGVRCIVIPGTQKVYLQCIK------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++IF AGC ++P+CG CLGG
Sbjct: 343 --EGLAEIFVNAGC-VLSTPTCGPCLGG 367
>gi|448620980|ref|ZP_21668057.1| 3-isopropylmalate dehydratase [Haloferax denitrificans ATCC 35960]
gi|445756030|gb|EMA07406.1| 3-isopropylmalate dehydratase [Haloferax denitrificans ATCC 35960]
Length = 437
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S A GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLS-AKSGTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F E F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAEHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLQD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLGDAFVSDDDADYEAVHTYDAAALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKVVADILAGETIAPNVRMVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|329766314|ref|ZP_08257861.1| 3-isopropylmalate dehydratase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137216|gb|EGG41505.1| 3-isopropylmalate dehydratase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 322
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 172/282 (60%), Gaps = 11/282 (3%)
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
G+CH +E PGEV +G DSHT T GA G FA G+G+TD +VL G++ KVP T
Sbjct: 5 GICHTLSHEEALVLPGEVYVGGDSHTNTTGALGSFACGLGHTDVAYVLLNGQIWFKVPET 64
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
L F L+G++P++++AKD IL+IIG+I+ G YK+M+F GT + +S+E R+T+CNM E
Sbjct: 65 LYFKLNGKLPEHVMAKDFILKIIGDITTEGGAYKAMQFGGTGISEMSVESRLTMCNMTTE 124
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
AG KNG+V D YL + + V+ D A + Y ++ S++EPLVAKP SP+N
Sbjct: 125 AGAKNGIVEPDQKVVDYLTSRGATNISLVHGDNDAEYEKVYEYEGSEMEPLVAKPFSPEN 184
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
++ RE V++D+ YIGSCTG K ED +AAAK+ G+KVK+ T ++PA+ ++
Sbjct: 185 ISIVREAPSVELDKSYIGSCTGAKYEDLVAAAKIL--KGRKVKIRTEILPASISIYKRAM 242
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
IF +AG T P+CGAC G A+
Sbjct: 243 E--------NGLLTIFLDAGV-TVGPPTCGACCGAHMGVLAK 275
>gi|114565932|ref|YP_753086.1| 3-isopropylmalate dehydratase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336867|gb|ABI67715.1| 3-isopropylmalate dehydratase, large subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 416
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 211/383 (55%), Gaps = 26/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + + D V +D +M D P + F++ + +V+D +I
Sbjct: 4 TIAEKILSTKSGR-DVKANDIVVAELDFIMGQDGTSPLAIQAFQEM--QARRVFDPARIA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + +R F EQ I FYDI D GVCH L ++G
Sbjct: 61 MVIDHSAPSPLEGVSELHRQMRSFAGEQGI-CFYDIGD-----------GVCHQLLPEQG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG++++G DSHTCT GA F+TG+G+TD L +GK+ KVP T +FVL+G++P
Sbjct: 109 HVVPGDLVIGADSHTCTYGAINVFSTGVGSTDLAAGLISGKLWFKVPETFKFVLNGQLPA 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL +IG+++ GATY + E+VG + LS+E R T+ NM +E G K G++ AD
Sbjct: 169 GVYSKDLILHLIGDVTADGATYMAAEYVGEAIAGLSVEARFTISNMAIEMGAKAGLMDAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T ++++ ++ + PV +D A + +D+S+LEP VA+PH+ DN A E
Sbjct: 229 QKTLDWVKEHSTKSFTPVKADADAVYARVKEYDVSRLEPQVARPHTVDNVAPIGEVAGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + IG+CT G+ ED AA + G+KVK + P++++V + +
Sbjct: 289 IQQGVIGTCTNGRMEDLRIAASIL--KGRKVKSRLIVAPSSRQVMLQAIR--------EG 338
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
+IF E+G +P CG C+G
Sbjct: 339 LIEIFLESGAAV-VTPGCGPCVG 360
>gi|325262460|ref|ZP_08129197.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp. D5]
gi|324032292|gb|EGB93570.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp. D5]
Length = 424
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 217/388 (55%), Gaps = 25/388 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + IF+ E + KV+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVVAGQLIEAKLDVVMANDITGPMALPIFR-EMAD--KVYDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++PDH+ D ++ N +R+F EQ +K++++ GV H L +
Sbjct: 60 VLVPDHFTPNKDIKSAENSKSIREFSKEQGLKWYFE----------QGKSGVEHAILPEA 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GVVVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAMKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ KD+I+ IIG+I V GA YKSMEF G ++ LSM++R T+ NM +EAG KNG+ P
Sbjct: 170 AFVSGKDIIIHIIGKIGVDGALYKSMEFTGDGLKELSMDDRFTMANMAIEAGAKNGIFPV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D Y+++ + Y+ +DE A + ++S++ P VA PH P N E +
Sbjct: 230 DEKAEDYMKEHSVKEYKIYEADEDAEYDEVIEINLSEVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
++ID+V IGSCT G+ ED AA + V ++PATQK++
Sbjct: 290 EPIRIDQVVIGSCTNGRMEDMRKAAAILKDRQVHPDVRVMVIPATQKIYKQCMA------ 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + IF +AGC +PSCG C+GG
Sbjct: 344 --EGLADIFVDAGCAV-NTPSCGPCMGG 368
>gi|313143552|ref|ZP_07805745.1| 3-isopropylmalate dehydratase large subunit [Helicobacter cinaedi
CCUG 18818]
gi|386762690|ref|YP_006236326.1| 3-isopropylmalate dehydratase large subunit [Helicobacter cinaedi
PAGU611]
gi|313128583|gb|EFR46200.1| 3-isopropylmalate dehydratase large subunit [Helicobacter cinaedi
CCUG 18818]
gi|385147707|dbj|BAM13215.1| 3-isopropylmalate dehydratase large subunit [Helicobacter cinaedi
PAGU611]
gi|396080184|dbj|BAM33560.1| 3-isopropylmalate dehydratase large subunit [Helicobacter cinaedi
ATCC BAA-847]
Length = 420
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 212/385 (55%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + + D + +D+++ +D+ P + FK+ + +V+D+ KI
Sbjct: 3 MTMSQKILADRARLESVKANDLIRAKLDMVLGNDITTPVAINAFKQ--AKFTQVFDKNKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A R F + +IK++YD+ ++G V H L ++
Sbjct: 61 SLVMDHFAPNKDIKAATQSQQCRCFANDFDIKHYYDVGNMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G++
Sbjct: 111 GIVTIGDLIIGADSHTCTYGALGAFSTGVGSTDMAVGMATGEAWFKVPKAMKFNLKGKLR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG+I V GA YKSMEF G ++ L++++R+ + NM +EAG KNG+
Sbjct: 171 PYVSGKDVILHIIGKIGVDGALYKSMEFSGEGLKNLTIDDRLCIANMAIEAGAKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y + +TS + +DE A + + ++ ++ VA PH P+N + ++
Sbjct: 231 DDITIEYAKGRTSKEFRIYKADEDAEYEEVFDIELDSIDHTVAFPHLPENTKEREQWGEI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V IGSCT G+ D AA + ++PATQ ++++ +
Sbjct: 291 KIDQVVIGSCTNGRLSDMEVAANILKDKTIAKNTRCIIIPATQNIYLECIN--------R 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P+CG CLGG
Sbjct: 343 GYLETFIKAGA-VVSTPTCGPCLGG 366
>gi|365170464|ref|ZP_09361078.1| homoaconitate hydratase [Synergistes sp. 3_1_syn1]
gi|363618072|gb|EHL69430.1| homoaconitate hydratase [Synergistes sp. 3_1_syn1]
Length = 418
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 203/384 (52%), Gaps = 25/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK RA+ ++ V V D M+HD P + FKK +N K E+I
Sbjct: 4 TFAEKALGRAAGY-EVVANQVVTVEPDWCMSHDNGAPIAR-TFKKIGVKNVKY--PERIC 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + N +R+F EQ I FYD+K G GVCH + +EG
Sbjct: 60 FILDHAVPAPSSDHAVNHKEVREFVKEQGIPNFYDVKSEG---------GVCHQKMCEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG V++G+DSHTCT GA+G F+TGIG ++ V TGK+ KVP +++ V+ G+
Sbjct: 111 YALPGLVMVGSDSHTCTYGAYGAFSTGIGRSEMAAVWATGKLWFKVPESMKVVVTGKFKP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD IL+ IG++ GA Y S+EF G +E +S+ ERMTLCNM +E G KN V D
Sbjct: 171 GVSAKDFILKFIGDVRADGADYMSVEFHGEGIENMSIAERMTLCNMGIEFGAKNAVCRPD 230
Query: 310 GTTFKYLEDKT-SLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
G ++D S +E +++D+ A + E +D+ + P VAKPH DN A E K
Sbjct: 231 GKVLDAIKDNAKSDKWEAIWADDDAVYAKELHYDLGDITPGVAKPHKVDNYAPIEEVKGT 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
I ++GSCT G+ ED AA + GKKV V T ++PA+ V+ +
Sbjct: 291 PIHEAFLGSCTNGRIEDLRLAAGIL--KGKKVAVRTVVIPASWIVYRQAMK--------E 340
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
IF +AGC +P CG C+G
Sbjct: 341 GLFDIFLDAGC-VICNPGCGPCMG 363
>gi|448541924|ref|ZP_21624548.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-646]
gi|448552535|ref|ZP_21630119.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-645]
gi|448553329|ref|ZP_21630303.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-644]
gi|445707803|gb|ELZ59656.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-646]
gi|445708706|gb|ELZ60545.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-645]
gi|445720471|gb|ELZ72144.1| 3-isopropylmalate dehydratase [Haloferax sp. ATCC BAA-644]
Length = 437
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFRTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F E F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAEHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLGD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKAGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLGDAFVSDDDADYEAVHTYDAADLAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++D++++G+CT G+ ED A + V +VPA++ V+ +
Sbjct: 292 GTELDQLFVGTCTNGRYEDIKIVADILAGETIAPNVRMVVVPASKSVYQHML-------- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
G Q +AG S CG C G
Sbjct: 344 GTGVFQTLTDAGA-VIQSAGCGPCAG 368
>gi|386393260|ref|ZP_10078041.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp.
U5L]
gi|385734138|gb|EIG54336.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp.
U5L]
Length = 419
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 207/401 (51%), Gaps = 27/401 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S++ PG V + +++ +D+ P + FKK A V+D++K+V
Sbjct: 4 TLAEKILQAHSDEQVTGPGQIVRCRLSLVLANDITAPLAIKSFKKM--GAAGVFDKDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + V + R+F + ++++ ++G V H L + G
Sbjct: 62 IVADHFTPNKDIASAEQVKVCREFAKAMGLTHYFEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ VL GE+
Sbjct: 112 LVGPGDVVIGADSHTCTYGGLGAFATGMGSTDVAGGMALGETWFKVPPTIQVVLTGELGT 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KDL+L +IG I V+GA YK++EF G LS+E R+T+ NM +EAGGK G+ PAD
Sbjct: 172 YVGGKDLMLALIGAIGVSGALYKALEFTGPLASALSIEGRLTMSNMAIEAGGKAGLFPAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + +D A + + + +EP +A PH PDN +
Sbjct: 232 AKTLEYTAKAGRTGDALLAADPGAVYERIVTINATGMEPQIACPHLPDNVKPVSAVAGLP 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ IGSCT G+ ED AA + GKKV V ++PAT +W
Sbjct: 292 IDQAVIGSCTNGRIEDLRQAAAIL--KGKKVSRNVRCIVLPATPSIWRQALA-------- 341
Query: 428 KTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC PA +CG CLGG A +A+
Sbjct: 342 EGLIETFMDAGCIVGPA--TCGPCLGGHMGILAGGERAIAT 380
>gi|258405581|ref|YP_003198323.1| 3-isopropylmalate dehydratase large subunit [Desulfohalobium
retbaense DSM 5692]
gi|257797808|gb|ACV68745.1| 3-isopropylmalate dehydratase, large subunit [Desulfohalobium
retbaense DSM 5692]
Length = 419
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 212/400 (53%), Gaps = 25/400 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + ++ PG V + + + +D+ P S +K G +V+D++++
Sbjct: 4 TVAEKILQQHTQDTVSEPGQIVRCEISLALANDITAPLSIRSLEK-MGAT-RVFDKDRVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V I+R+F + I ++Y+ ++G V H L + G
Sbjct: 62 LVCDHFTPNKDIDSAEQVRIVREFARKMGITHYYEGGEVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT G G FATG+G+TD + G+ KVPPT+R ++G++
Sbjct: 112 LVGPGDIVVGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRVDVNGDLGR 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL +IG I V GA YK++EF G TV L +E R+T+ NM +EAGGK G+ PAD
Sbjct: 172 FVGGKDIILHLIGTIGVDGALYKALEFGGGTVRDLDLEARLTIANMAIEAGGKVGLFPAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TT YL+ + +DE A + D + L+P VA PH P+N R+ D+
Sbjct: 232 QTTLDYLQAHGRSGDTFLEADEGAGYERRVAIDAASLQPQVACPHLPENVHPVRDVGDIP 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V IGSCT G+ D AA+ L GKKV + ++PAT ++
Sbjct: 292 LDQVVIGSCTNGRISDLREAAE--LLKGKKVAKGLRLIILPATPGIYRQALE-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ F EAG P+CG CLGG A+ +A+
Sbjct: 342 EGLMTTFMEAGA-IVGPPTCGPCLGGHMGILAQGERALAT 380
>gi|448608035|ref|ZP_21659874.1| 3-isopropylmalate dehydratase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445737077|gb|ELZ88615.1| 3-isopropylmalate dehydratase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 437
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 203/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F E F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAEHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLQD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+ VE L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSAVESLPIHERLVLSNMAIEMGGKAGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLGDAFVSDDDADYEAIHTYDAAALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + V +VPA++ V+ +
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKVVADILDGETIAPNVRMVVVPASKSVYQHML-------- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
G Q +AG S CG C G
Sbjct: 344 GTGVFQTLTDAGA-VIQSAGCGPCAG 368
>gi|126179892|ref|YP_001047857.1| homoaconitate hydratase family protein [Methanoculleus marisnigri
JR1]
gi|125862686|gb|ABN57875.1| 3-isopropylmalate dehydratase, large subunit [Methanoculleus
marisnigri JR1]
Length = 417
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 210/389 (53%), Gaps = 33/389 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EK+FS+ + + G+ V VD M HD+ GP + +F++ GE +V+D E+I+
Sbjct: 4 TIAEKVFSQRCGR-SVRAGEVVMAPVDAAMIHDITGPLAVRVFREMGGE--RVFDPERII 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + A N +R F EQ I + YD+ +GVCH + ++G
Sbjct: 61 MLFDHQVPADSIPAAENHVFMRRFADEQGI-HNYDL-----------LEGVCHQVVMEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PGE+++GTDSHTCT GA G FATGIG+TD GFVL G + +VP ++R ++G
Sbjct: 109 RAAPGEIIVGTDSHTCTYGAAGAFATGIGSTDMGFVLKFGALYFRVPESIRIEVEGAFGR 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL + G+I GATY ++EF G + ++M RMT NM +E G K G+V D
Sbjct: 169 RVGAKDLILSLAGDIGADGATYMALEFTGDAMHTMNMAGRMTCANMAIEMGAKAGIVTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T+ Y+ + + + D A + +D++ L P VA PH+ DN + K
Sbjct: 229 AATWDYVAARRDIEPFDLAGDPDAEYRERRHYDVTDLAPQVAVPHNVDNVVDVGKVAGTK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVF-----LASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+D+V+IGSCT G+ ED AA+V A G +V V +PA++ ++
Sbjct: 289 VDQVFIGSCTNGRYEDLAEAAEVLGNADRFADGVRVIV----IPASRTEYLKAL------ 338
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
GG + F EAG A P CG C+GG
Sbjct: 339 RGGLI--ERFVEAGALVEA-PCCGPCMGG 364
>gi|365132631|ref|ZP_09342275.1| 3-isopropylmalate dehydratase large subunit [Subdoligranulum sp.
4_3_54A2FAA]
gi|363616571|gb|EHL68007.1| 3-isopropylmalate dehydratase large subunit [Subdoligranulum sp.
4_3_54A2FAA]
Length = 421
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 211/389 (54%), Gaps = 27/389 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D+++ +D+ P + F+K G +A V+D+ KI
Sbjct: 3 MTMTQKILAAHAGLDSVVSGQLIMAKLDMVLGNDITSPVAINEFEKA-GFDA-VFDKTKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH++ D +A + R F + +I FYD+ ++G + H L ++
Sbjct: 61 SLVMDHFVPNKDIKAAQQARQSRMFADKYDILNFYDVGEMG----------IEHALLPEK 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G+ ++G DSHTCT GA G F+TG+G+TD + TG+ KVP +RF L G +
Sbjct: 111 GLVAAGDCVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGQCWFKVPAAIRFNLTGALQ 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL IIG I V GA YKSMEF G + LS+++R+ + NM +EAG KNG+
Sbjct: 171 GHASGKDVILHIIGRIGVDGALYKSMEFGGPGLASLSIDDRLCMANMAIEAGAKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK-- 366
D T Y++ + Y D A + D+S + P VA PH P+N E
Sbjct: 231 DDVTRAYMDGRAQHAYTVYAPDADAPYEQVIDVDLSAIRPTVAFPHLPENTKTIDEAAAL 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+VKID+V IGSCT G+ D AAA + G+KV +V ++PATQ V+ + L
Sbjct: 291 NVKIDQVVIGSCTNGRLSDMAAAAAIL--KGRKVARRVRAIIIPATQHVYKECIRLGYMD 348
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AGC ++P+CG CLGG
Sbjct: 349 T--------FIDAGC-VVSTPTCGPCLGG 368
>gi|303326539|ref|ZP_07356982.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp.
3_1_syn3]
gi|345893794|ref|ZP_08844586.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio sp.
6_1_46AFAA]
gi|302864455|gb|EFL87386.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio sp.
3_1_syn3]
gi|345045830|gb|EGW49729.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio sp.
6_1_46AFAA]
Length = 420
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 208/388 (53%), Gaps = 28/388 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI +++ G + V +++ +D+ GP + F+ E KV+D+++I
Sbjct: 4 TLAQKILQAHTDEAVRCDGQIIQCRVSMVLANDITGPLAIKSFRGMGAE--KVFDKDRIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V I R+F EQ I ++Y+ D G V H L ++G
Sbjct: 62 LVMDHFTPQKDIDSANQVLISRNFAEEQGITHYYEGGDCG----------VEHTLLPEQG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT G G FATG+G+TD + G+ LKVPPT+R + GEMP
Sbjct: 112 LVAPGDLVIGADSHTCTYGGIGAFATGMGSTDIAAAMALGETWLKVPPTIRVEIRGEMPR 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+L AKDL+L +IG I V GA YK++EF G ++ L +E R+T+ NM +EAGGK G+ D
Sbjct: 172 WLRAKDLMLLLIGAIGVDGALYKALEFGGPVIDALDVEGRLTMANMAIEAGGKAGLFAVD 231
Query: 310 GTTFKYLED--KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T Y + + L E + +D A + D++ EP+VA PH P N E D
Sbjct: 232 AQTRAYCAEHGRPGLSLE-LAADPDAVYERVVEIDVTGREPVVACPHLPSNVKPVSEVGD 290
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
I +V IGSCT G+ D AA+V G+KV KV ++P+T VW
Sbjct: 291 TPIQQVVIGSCTNGRISDMRDAAEVL--RGRKVDKKVRCIVLPSTPTVWKQCLK------ 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++F +AGC +CG CLGG
Sbjct: 343 --EGLMEVFMDAGC-IVGPCTCGPCLGG 367
>gi|328545449|ref|YP_004305558.1| 3-isopropylmalate dehydratase large subunit [Polymorphum gilvum
SL003B-26A1]
gi|326415190|gb|ADZ72253.1| 3-isopropylmalate dehydratase, large subunit [Polymorphum gilvum
SL003B-26A1]
Length = 438
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 189/346 (54%), Gaps = 23/346 (6%)
Query: 73 EKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIP 132
+KI +RA+ + ++PG+ V VD+ M HD GP +E G +WD +K+V+I
Sbjct: 17 QKILARAAGRDHVTPGEIVTATVDLAMIHDSGGPRRVEPILRELG--VGLWDADKVVLIS 74
Query: 133 DHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCR 192
DH++ + R +D+ R + E+ + + D +G+CH+ L + GH
Sbjct: 75 DHFVPGDTDEGARILDLTRQWAKERKVAFH-------------DGEGICHVVLPERGHLN 121
Query: 193 PGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLL 252
PG +++G DSH+ T GAFG + G+G T+ VL TG++ LKVP T+ G + D +
Sbjct: 122 PGMLVVGGDSHSPTGGAFGAYMFGVGATEMAGVLATGEIWLKVPETILIEWRGRLADGVT 181
Query: 253 AKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTT 312
AKD++L + G + + G Y+++E+ G + LSM+ERMTL NM E GG+ G++ D TT
Sbjct: 182 AKDIMLALCGRLGMDGGRYQAVEYTGEAIAALSMQERMTLSNMAAELGGQAGLIAPDATT 241
Query: 313 FKYLEDKTSL----PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
YLE + + + +D A ++ + FD LEP VA PHSP N + D
Sbjct: 242 AAYLEAAGVVLSPDDWTWLKTDPGAPLMAHHAFDAGALEPQVAAPHSPANSGPVTDAADT 301
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQK 412
ID Y+G+CTG K ED AA++ G+KV V + PA+ +
Sbjct: 302 AIDVAYVGACTGAKYEDLKNAARIL--QGRKVASGVDLMVAPASLR 345
>gi|294101114|ref|YP_003552972.1| homoaconitate hydratase family protein [Aminobacterium colombiense
DSM 12261]
gi|293616094|gb|ADE56248.1| homoaconitate hydratase family protein [Aminobacterium colombiense
DSM 12261]
Length = 429
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 205/389 (52%), Gaps = 29/389 (7%)
Query: 68 AMTLTEKIFS-RASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
A TL I + ++ PQ G+ V VD +D+ P + FK E KV+D
Sbjct: 2 ARTLVSTIIAAHSTGSPQ--EGEICKVRVDFAFANDITTPPAIQSFKAMGAE--KVFDPL 57
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+ ++PDH+ D + ++F Q + Y+ ++G GV H L
Sbjct: 58 RCAVLPDHFTPNKDIASAEQAKKGKEFAQSQKMLYW----EVGRV-------GVEHAFLP 106
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G+ PG+++ G DSHTCT GA G +TG+G+TD V G+ L+VPPTLR GE
Sbjct: 107 EQGYILPGDIVTGADSHTCTGGALGALSTGMGSTDLAAVWALGETWLRVPPTLRVDFVGE 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
P ++ KD+IL ++G I V GA Y ++EF G + L M++R T+ NM VEAGGK G+
Sbjct: 167 RPGWVTGKDMILALLGRIGVQGARYMALEFGGEALSCLPMDDRFTIANMAVEAGGKAGIF 226
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +Y + S + P+Y +AS+L D++ +EP+VA PHSPDN R C+
Sbjct: 227 VPDQTMLEYASKRASRRFTPLYPHAQASYLRRETIDVTNMEPVVALPHSPDNVKAVRACR 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
I +V+IGSCT G+ D AA L GKKV V ++PA+ +V+
Sbjct: 287 PFHIHQVFIGSCTNGRFRDIEMAA--LLLEGKKVADNVRCIVIPASYEVYNQALE----- 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K +IF +AG +P+CG CLGG
Sbjct: 340 ---KGYIKIFADAGA-VVCTPTCGPCLGG 364
>gi|237751151|ref|ZP_04581631.1| 3-isopropylmalate dehydratase large subunit [Helicobacter bilis
ATCC 43879]
gi|229373596|gb|EEO23987.1| 3-isopropylmalate dehydratase large subunit [Helicobacter bilis
ATCC 43879]
Length = 420
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 212/385 (55%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + + D + +D+++ +D+ P + FK+ + +V+D+ KI
Sbjct: 3 MTMSQKILADRAGLESVKANDLIRAKLDMVLGNDITTPVAINAFKQ--AKFTQVFDKNKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A R F + +IK++YD+ ++G V H L ++
Sbjct: 61 SLVMDHFAPNKDIKAATQSQQCRCFANDFDIKHYYDVGNMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G++
Sbjct: 111 GIVTIGDLIIGADSHTCTYGALGAFSTGVGSTDMAVGMATGEAWFKVPKAMKFNLKGKLR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG+I V GA YKSMEF G ++ L++++R+ + NM +EAG KNG+
Sbjct: 171 PYVSGKDVILHIIGKIGVDGALYKSMEFSGEGLKNLTIDDRLCIANMAIEAGAKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +Y + +TS + +DE A + + ++ ++ VA PH P+N + ++
Sbjct: 231 DDITIEYAKGRTSKEFRIYKADEDAEYEEVFDIELDSIDHTVAFPHLPENTKEREQWGEI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V IGSCT G+ D AA + ++PATQ ++++ +
Sbjct: 291 KIDQVVIGSCTNGRLSDMEVAANILKDKTIAKNTRCIIIPATQNIYLECIN--------R 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P+CG CLGG
Sbjct: 343 GYLETFIKAGA-VVSTPTCGPCLGG 366
>gi|266624449|ref|ZP_06117384.1| 3-isopropylmalate dehydratase, large subunit, partial [Clostridium
hathewayi DSM 13479]
gi|288863697|gb|EFC95995.1| 3-isopropylmalate dehydratase, large subunit [Clostridium hathewayi
DSM 13479]
Length = 372
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 23/334 (6%)
Query: 122 VWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVC 181
V+D++K+ ++ DH+I D ++ N RDF I ++D+ +G +
Sbjct: 5 VFDKDKVALVMDHFIPNKDIKSAENCKCCRDFACRHEISNYFDVGQMG----------IE 54
Query: 182 HIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRF 241
H L ++G G+ ++G DSHTCT GA G F+TG+G+TD + TGK KVP L+F
Sbjct: 55 HALLPEKGLVVAGDAVIGADSHTCTYGALGAFSTGVGSTDMAAGMVTGKAWFKVPSALKF 114
Query: 242 VLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGG 301
L G+ ++ KD+IL IIG I V GA YKSMEF G ++ L+M++R T+CNM +EAGG
Sbjct: 115 ELVGKPNGWVSGKDVILHIIGMIGVDGALYKSMEFTGDGIKNLTMDDRFTICNMAIEAGG 174
Query: 302 KNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
KNG+ P D +Y++D + + +D A + Y D+S+L+P VA PH P+N
Sbjct: 175 KNGIFPVDDLAVQYMKDHSKRDFTVYEADPDAEYDEVYTIDLSELKPTVAFPHLPENTKT 234
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYT 419
D+ +D+ IGSCT G+ +D AA+V G+KV V ++PATQ++++
Sbjct: 235 IGSFGDIPVDQSVIGSCTNGRIDDMRIAARVM--KGRKVAKNVRCIVIPATQEIYLQAMR 292
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG ++P+CG CLGG
Sbjct: 293 --------EGLLEIFIEAGA-IVSTPTCGPCLGG 317
>gi|167761155|ref|ZP_02433282.1| hypothetical protein CLOSCI_03560 [Clostridium scindens ATCC 35704]
gi|167660821|gb|EDS04951.1| 3-isopropylmalate dehydratase, large subunit [Clostridium scindens
ATCC 35704]
Length = 424
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 222/395 (56%), Gaps = 39/395 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + +F++ KV+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVEAGQLIEAKLDVVMANDITGPMAVPVFRQM---ADKVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+++PDH+ D ++ N +R+F EQ + ++Y++ +G + H L ++
Sbjct: 60 ILVPDHFTPNKDIKSAENSKSIREFAKEQGLTHYYEVGQMG----------IEHAILPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GITVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG I V GA YKSMEFVG + L+M++R T+ NM +EAG KNG+
Sbjct: 170 PYVSGKDIIIHIIGRIGVDGALYKSMEFVGDGIASLTMDDRFTMANMAIEAGAKNGIFLV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D +Y+++ + Y+ +D A + + D++K+ P VA PH P N E +
Sbjct: 230 DEKAEEYMKEHSDKEYKIYEADADADYDAVVEVDLAKVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+KID+V IGSCT G+ ED AA V G+KV V ++PATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRRAAAVL--KGRKVHPDVRVMVIPATQKIY--------- 338
Query: 424 GSGGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C + IF +AGC +PSCG C+GG
Sbjct: 339 ----KQCIKEGLVDIFIDAGC-AFNTPSCGPCMGG 368
>gi|448563700|ref|ZP_21635627.1| 3-isopropylmalate dehydratase [Haloferax prahovense DSM 18310]
gi|445717639|gb|ELZ69353.1| 3-isopropylmalate dehydratase [Haloferax prahovense DSM 18310]
Length = 437
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 206/386 (53%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S A GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLS-AKSGTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLQD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDK--TSLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE + T + + + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTEAYLERQIGTEIDLDDAFVSDDDADYEAVHSYDAAALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKIVADILAGETIAPNVRMVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|303249269|ref|ZP_07335503.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
fructosovorans JJ]
gi|302489343|gb|EFL49298.1| 3-isopropylmalate dehydratase, large subunit [Desulfovibrio
fructosovorans JJ]
Length = 419
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 206/400 (51%), Gaps = 25/400 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S++ PG V + +++ +D+ P + FKK G A V+D++K+
Sbjct: 4 TLAEKLLQAHSDEQVTGPGQIVRCRLSLVLANDITAPLAIKAFKK-MGATA-VFDKDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + V + R+F E I ++Y+ ++G V H L + G
Sbjct: 62 IVADHFTPNKDIASAEQVKVCREFAKEMGITHYYEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ VL G +
Sbjct: 112 LVGPGDVVIGADSHTCTYGGLGAFATGMGSTDIAGGMALGETWFKVPPTIQVVLTGTLGK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ KDL+L +IG I V+GA YK++EF G LS+E RMT+ NM +EAGGK G+ AD
Sbjct: 172 YVGGKDLMLALIGTIGVSGALYKALEFTGPLASELSVEGRMTMSNMAIEAGGKVGLFVAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T + P+ +D A++ D + +E +A PH P+N E ++
Sbjct: 232 TKTLDFAAKAGRTGDTPLAADPGAAYERTVTIDATGMEVQIACPHLPENVKPVSEVAGLR 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ IGSCT G+ ED AA + GKKV V ++PAT +W
Sbjct: 292 IDQSVIGSCTNGRIEDLRQAASIL--KGKKVSRDVRCIVLPATPAIWRQALA-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC +CG CLGG A +A+
Sbjct: 342 EGLIETFMDAGC-VVGPATCGPCLGGHMGILAGGERAIAT 380
>gi|291550796|emb|CBL27058.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus torques
L2-14]
Length = 416
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 204/370 (55%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D +M++D + ++ + +N ++ D +K+V I DH + + +
Sbjct: 19 VKPGDIHTVTLDRMMSNDGTTHLTVDMYNNKL-KNPRIADPKKLVFIVDHNVPSDSPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E I ++ + KGVCH + E + RPGE++ G DSHT
Sbjct: 78 ASQKKMRDFAKENGIDFW-------------EGKGVCHQVM-MENYVRPGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG+ + VP +++F L GE+P+ + A+DLIL IIG++
Sbjct: 124 CSYGALGAFGTGVGCTDFLYGMVTGQSWVLVPESVKFNLIGELPEGVYARDLILTIIGQV 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + LS+ +R+ LCNM VEAG K G+ AD +YL++ P
Sbjct: 184 GANGCNYQVMEFTGEGAKTLSISDRIALCNMAVEAGAKTGIFEADEKAMEYLKEHGREPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A ++ EY D+SK+EP+VAKP DN + A+E + +KID ++GSC G+ E
Sbjct: 244 AVFHSDPDAHYIREYTIDLSKVEPVVAKPDFVDNLSPAKEVRGIKIDEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A+V GKKV KV +VPA+Q ++ + IF EAG
Sbjct: 304 DLRVGAEVI--KGKKVADKVRFLVVPASQTIYRQALK--------EGLLDIFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|399577675|ref|ZP_10771427.1| 3-isopropylmalate dehydratase [Halogranum salarium B-1]
gi|399237117|gb|EJN58049.1| 3-isopropylmalate dehydratase [Halogranum salarium B-1]
Length = 437
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 208/386 (53%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +D+ M HD+ GP +F F + GE+A ++ ++ +
Sbjct: 5 TLAEKLLSDKS-GTDAHAGDYVEAEIDVAMAHDITGPLAFQTFDEVTGEDADLFAPDRTI 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP T+RF ++GE+ D
Sbjct: 112 FVKPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPETMRFEVEGELAD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYGGSTIESLPIHERLVLSNMAIEMGGKAGFVEPD 231
Query: 310 GTTFKYLEDKTS--LPY-EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T +P+ + ++SDE A++ S + + L P V+KP +P+N + +
Sbjct: 232 LRTVDYLERQTGEVVPFDDDLHSDEDATYDSVHTYRAEDLAPQVSKPSNPENAVDVTDVE 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + V +VPA++ V+ Y L
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKLVADILDGEELAPNVRMVVVPASKSVYQ--YMLQT---- 345
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 346 --GVFQTLTDAGA-VIQSAGCGPCAG 368
>gi|269836044|ref|YP_003318272.1| homoaconitate hydratase family protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785307|gb|ACZ37450.1| homoaconitate hydratase family protein [Sphaerobacter thermophilus
DSM 20745]
Length = 424
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S+ L+PGD V V D++M +DV GP +F + +K V+D KIV
Sbjct: 4 TLAEKILLAHSDVADLAPGDIVMVRCDLVMANDVSGPVAFRMMEKMGAST--VFDPTKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH+ D R+ L+++ + Y+ + G+ H L ++G
Sbjct: 62 MAADHFAPAKDARSADLQRQLKEWSDRHGVTYYGQGR-----------GGIEHTVLVEDG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V+ G DSHTCT GA G F +G+G+TD L G VP T+ G
Sbjct: 111 WIVPGTVIAGGDSHTCTYGALGAFGSGLGSTDIAACLVFGSFWQTVPATIEVTFTGAKRP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KDLIL +I I V G T +EFVG L+++ER+ + NM VEAG + G+ PAD
Sbjct: 171 FVTGKDLILAVIDAIGVGGGTNTVLEFVGPGAAALTIDERLAVANMAVEAGAETGLFPAD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL +T P++P SD ASF R D+ + PL+A PHSP N E K
Sbjct: 231 EVTAAYLAGRTDRPWQPERSDPDASFARRVRIDLDGVPPLIALPHSPGNVVPVAEAAGRK 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+VYIG+C G D AA + + V +VPA+QKV+ + +
Sbjct: 291 IDQVYIGNCANGTMTDLRQAASILAGNRVHPDVRAIIVPASQKVYREALA--------EG 342
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
F AG ++P+CGAC GG
Sbjct: 343 LIDQFVAAGAIV-STPTCGACFGG 365
>gi|292654109|ref|YP_003534007.1| 3-isopropylmalate dehydratase [Haloferax volcanii DS2]
gi|448289187|ref|ZP_21480360.1| 3-isopropylmalate dehydratase [Haloferax volcanii DS2]
gi|291369739|gb|ADE01967.1| 3-isopropylmalate dehydratase [Haloferax volcanii DS2]
gi|445583014|gb|ELY37349.1| 3-isopropylmalate dehydratase [Haloferax volcanii DS2]
Length = 437
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLGD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLGDAFVSDDDADYEAVHSYDAAALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKVVADILEGETIAPNVRLVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|448572664|ref|ZP_21640502.1| 3-isopropylmalate dehydratase [Haloferax lucentense DSM 14919]
gi|445720271|gb|ELZ71947.1| 3-isopropylmalate dehydratase [Haloferax lucentense DSM 14919]
Length = 437
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLGD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGIVTPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNDIDLGDAFVSDDDADYEAVHTYDATALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++D++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTELDQLFVGTCTNGRYEDIKVVADILAGETIAPNVRLVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|392408063|ref|YP_006444671.1| 3-isopropylmalate dehydratase large subunit [Anaerobaculum mobile
DSM 13181]
gi|390621199|gb|AFM22346.1| 3-isopropylmalate dehydratase, large subunit [Anaerobaculum mobile
DSM 13181]
Length = 419
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 210/393 (53%), Gaps = 26/393 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI + ++ PGD + V+VD+L+ +D+ GP + +F K + V+D+ KIV
Sbjct: 4 TVTEKILAAHCKQGNFKPGDIIDVDVDLLLMNDITGPVAVEVFNKM--GDGDVFDKNKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + + +RDF E+ I +FYD G+ H+ L ++G
Sbjct: 62 VVLDHFTPNKDVTSAKLSKTMRDFVAEKGICHFYDAG-----------YGIEHVVLPEDG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++++G DSHT T GA G F+TG+G+TD ++ GK LKVP ++ +L G
Sbjct: 111 LVKPGDLVIGGDSHTVTHGALGVFSTGMGSTDVAGIMALGKTWLKVPEQMKVLLVGAPGK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL +I I GA KS+EF G + + M+ R T+CNM VE G NG+ D
Sbjct: 171 WVSGKDVILYVISMIGTDGALGKSLEFDGVGAKYMDMDSRFTICNMAVECGAVNGIFAFD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
K+++ Y+ SD A + D+S+LEP+VA PH P N E D+K
Sbjct: 231 EVAKKFVDALGLRDYKEYNSDADAIYKKIIDVDLSELEPMVAMPHLPSNGRPVTEVGDIK 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ +D AA++ GKKV V + P ++KV+
Sbjct: 291 IDQVFIGSCTNGRIKDLRIAAEI--VKGKKVHPSVRGLIAPGSRKVFAQALK-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ + F ++G T P CG C GG A+
Sbjct: 341 EGLIETFTDSGF-TILPPGCGPCFGGHLGILAK 372
>gi|239623333|ref|ZP_04666364.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522299|gb|EEQ62165.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 417
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 203/386 (52%), Gaps = 21/386 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+T+KI + ++ + PG+ + ++D++M DV P + ++ FG + +WD ++
Sbjct: 2 GMTMTQKILASHCKRSGVMPGELIHAHLDLVMGSDVTTPIALQELER-FGLDT-IWDSKR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
IV++ DH+ D +A RN +R+F I +FYD +G + H L +
Sbjct: 60 IVLVMDHFAPNKDIQAARNCKKVREFAARHQISHFYDGGKMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G P ++++G DSHTCT GA G F+TGIG+TD + TG+ K+P +R L G +
Sbjct: 110 QGLIAPSKLIIGADSHTCTYGALGAFSTGIGSTDMAAGMITGQCWFKIPEAIRVTLTGCL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
KD+IL +IG I V GA YKS+EF G + L+M++R ++CNMV+E+G KNG+ P
Sbjct: 170 TYPCSGKDVILTLIGMIGVDGARYKSIEFSGDGLHSLNMDDRFSICNMVIESGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL+ + P+ D A + E D+S+L P+ A P P N E
Sbjct: 230 VDEQTLDYLDGRVRRPFTIAAPDPDAVYSQEIVIDLSRLTPVAAGPSLPSNVKPVAEYYG 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
++I + IGSC+ G+ D AAA V V ++PAT ++
Sbjct: 290 IEIHQAVIGSCSNGRISDLRAAAAVMKGEKVHPSVRCIIIPATPTIYRQAMA-------- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF E+G + P+CG C GG
Sbjct: 342 EGLLDIFLESGALV-SMPTCGPCNGG 366
>gi|226322410|ref|ZP_03797928.1| hypothetical protein COPCOM_00178 [Coprococcus comes ATCC 27758]
gi|225209210|gb|EEG91564.1| homoaconitate hydratase family protein [Coprococcus comes ATCC
27758]
Length = 417
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 202/370 (54%), Gaps = 27/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D LM++D + ++ + +N + D +K+V I DH + + +
Sbjct: 19 VKPGDIHTVELDRLMSNDGTTHLTVDMYNNKLKKNPHIADTDKLVFIVDHNVPSDCPKTA 78
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF +I ++ + KGVCH + E + RPGE++ G DSHT
Sbjct: 79 ASQKKMRDFAKANHIDFW-------------EGKGVCH-QIMMENYVRPGELIFGADSHT 124
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG + VP T++F L G++P+ + A+DLIL IIGE+
Sbjct: 125 CSYGALGAFGTGVGCTDFLYGMVTGTSWVMVPETVKFNLVGKLPEGVYARDLILTIIGEV 184
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + L++ +R+ LCNM VEAG K G+ D +YL++ P
Sbjct: 185 GANGCNYQVMEFTGEGAKTLTISDRIALCNMAVEAGAKTGIFEVDDVAMEYLKEHGREPK 244
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A ++ EY FD+SK+EP+VAKP DN A A++ + +KID ++GSC G+ E
Sbjct: 245 AVYHSDPDAHYVREYTFDLSKVEPVVAKPDFVDNLAPAKDVRGIKIDEAFLGSCNNGRIE 304
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A+V GKKV KV +VPA+Q ++ + IF +AG
Sbjct: 305 DLRVGAQVI--KGKKVSEKVRFLVVPASQTIYRQALE--------EGLIDIFMDAGA-IV 353
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 354 MNPNCSVCWG 363
>gi|220903783|ref|YP_002479095.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|254808572|sp|B8J4F9.1|LEUC_DESDA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|219868082|gb|ACL48417.1| homoaconitate hydratase family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 420
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 208/390 (53%), Gaps = 28/390 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDRE 126
A TL +KI ++ G V V +++ +D+ GP + F +G AK V+DR
Sbjct: 2 AQTLAQKILQAHTDDAVEQDGQIVQCRVSMVLANDITGPLAIKSF---YGMGAKKVFDRT 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
KI ++ DH+ D + V I R F EQ+I ++Y+ D G V H L
Sbjct: 59 KIALVMDHFTPQKDIDSANQVLISRRFAEEQDIVHYYEGGDCG----------VEHTLLP 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG++++G DSHTCT G G FATG+G+TD + G+ LKVP T+R + G+
Sbjct: 109 EQGLVGPGDLVIGADSHTCTYGGIGAFATGMGSTDIAAGMALGETWLKVPSTIRVNISGD 168
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
MP +L KDL+L +IG I V GA YK++EF G+ V+ LS+E R+++ NM +EAGGK G+
Sbjct: 169 MPRWLRGKDLMLMLIGAIGVDGALYKALEFGGSVVDALSVEGRLSMANMAIEAGGKAGLF 228
Query: 307 PADGTTFKY-LEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T Y E K E + +D A + +++ EP+VA PH P N E
Sbjct: 229 AVDAKTRTYCAEHKRPGVLENMAADSGAVYERVVDMNVTGKEPVVACPHLPSNVKPVSEV 288
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+D I +V IGSCT G+ D AA+V G+KV V ++P+T VW
Sbjct: 289 RDTAIQQVVIGSCTNGRISDMRDAAEVL--RGRKVDKGVRCIVLPSTPTVWKQCLR---- 342
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++F EAGC S +CG CLGG
Sbjct: 343 ----EGLIEVFMEAGCIVGPS-TCGPCLGG 367
>gi|448598726|ref|ZP_21655066.1| 3-isopropylmalate dehydratase [Haloferax alexandrinus JCM 10717]
gi|445737881|gb|ELZ89410.1| 3-isopropylmalate dehydratase [Haloferax alexandrinus JCM 10717]
Length = 437
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLGD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLGDAFVSDDDADYEAVHTYDATALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++D++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTELDQLFVGTCTNGRYEDIKVVADILAGETIAPNVRLVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|406982241|gb|EKE03585.1| hypothetical protein ACD_20C00181G0003 [uncultured bacterium]
Length = 433
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 213/386 (55%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S K + G+ V VD+ D GP + +K E A + E+ +
Sbjct: 4 TIAEKIISEHCGK-SVKAGEFVVAKVDVTAVQDGTGPLTIEEIRKINLEQAA--NPERTI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + ILR+F K + D+G +GVCH L E
Sbjct: 61 LFIDHAAPSPRKELSNAHKILREFAK----KTGAIVSDIG--------EGVCHQRLV-EN 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PGE+L+G DSHTCT+GA G FATG+G+TD G + GKV LKVP T++ ++G+
Sbjct: 108 YVNPGEILIGADSHTCTSGALGAFATGMGSTDVGIAIALGKVWLKVPETIKIEINGQFQS 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG I GATYKS+EF G TV +SM +R TL NM VEAG K G++ +D
Sbjct: 168 GVGAKDLILHLIGIIGADGATYKSLEFTGETVRNMSMADRFTLSNMAVEAGAKAGLIASD 227
Query: 310 GTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
TT YL + Y + +D A + D++K+EP V+ PH+ DN LA + +V
Sbjct: 228 ETTRDYLLTRGRCHMYREINADPDAVYERVIEIDVTKIEPTVSCPHTVDNTELASKLSNV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CT G+ +D AA++ K+V T +VPA+++V+++
Sbjct: 288 KVDQVFIGTCTNGRIQDLRIAAQIL--QDKRVNRDTRLIIVPASREVYIEALK------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF EAG +SP CG C+G
Sbjct: 339 -EGFIRIFIEAGA-LVSSPGCGPCVG 362
>gi|229828853|ref|ZP_04454922.1| hypothetical protein GCWU000342_00938 [Shuttleworthia satelles DSM
14600]
gi|229792016|gb|EEP28130.1| hypothetical protein GCWU000342_00938 [Shuttleworthia satelles DSM
14600]
Length = 434
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 221/393 (56%), Gaps = 25/393 (6%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G + MT+T+KI + + + G + +D+++ +D+ P + + K + V
Sbjct: 11 GDGRMGMTMTQKILAAHAGLDHVEVGQLIMAQLDLVLGNDITSPVAIDVMKDM--DTKGV 68
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+DRE+I ++ DH++ D ++ + +R+F + I +FYD+ +G + H
Sbjct: 69 FDRERIALVMDHFVPNKDIKSAEHCKCVREFACQHEISHFYDVGQMG----------IEH 118
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L ++G G+V++G DSHTCT GA G F+TG+G+TD + TG+ KVP +RF
Sbjct: 119 ALLPEKGLVVAGDVVIGADSHTCTYGALGAFSTGVGSTDMAAGMATGQAWFKVPEAIRFK 178
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L G+ Y+ KD+IL IIG I V GA Y+SMEF G ++ LSM++R T+ NM +E G K
Sbjct: 179 LVGKPGPYISGKDIILHIIGLIGVDGARYQSMEFDGEGIQYLSMDDRFTIANMAIEGGAK 238
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
NG+ P D T Y+++ +D A + +EY D+S L+P V+ PH P+N
Sbjct: 239 NGIFPVDDQTLAYIKEHADRKPLVYEADADADYAAEYTIDLSSLKPTVSFPHLPENTRTI 298
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTL 420
+ +D+ ID+V IGSCT G+ D AAA++ G+KV +V T ++PATQ++++D
Sbjct: 299 DQIEDIAIDQVVIGSCTNGRLSDLKAAAEIL--KGRKVADRVRTIIIPATQQIYLDAMQ- 355
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ F EAG ++P+CG CLGG
Sbjct: 356 -------AGYLKTFIEAGA-VVSTPTCGPCLGG 380
>gi|448587020|ref|ZP_21648772.1| 3-isopropylmalate dehydratase [Haloferax gibbonsii ATCC 33959]
gi|445724240|gb|ELZ75874.1| 3-isopropylmalate dehydratase [Haloferax gibbonsii ATCC 33959]
Length = 437
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 203/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S A GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLS-AKSGTDARAGDYVEADVDVAMAHDITGPLAFRTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLQD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERAESYLERQTGNEVDLADAFVSDDDADYEAVHSYDAAALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++D++++G+CT G+ ED A + V +VPA++ V+ +
Sbjct: 292 GTEVDQLFVGTCTNGRYEDIKIVADILAGETIAPNVRMVVVPASKSVYQHML-------- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
G Q +AG S CG C G
Sbjct: 344 GTGVFQTLTDAGA-VIQSAGCGPCAG 368
>gi|150399540|ref|YP_001323307.1| homoaconitate hydratase family protein [Methanococcus vannielii SB]
gi|150012243|gb|ABR54695.1| homoaconitate hydratase family protein [Methanococcus vannielii SB]
Length = 418
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 208/392 (53%), Gaps = 33/392 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL E I S+ K + D+V ++VD+ MTHD P + F++ + +V+D +KI
Sbjct: 1 MTLAEAILSKKLGK-NVYAKDSVEIDVDLAMTHDGTTPLTVKAFEEI---SDRVFDNKKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI+ DH I + +A I RDF + +IK +Y D +G+CH L ++
Sbjct: 57 VIVFDHNIPANTSKAANMQIITRDFIKKHDIKNYY-----------LDGEGICHQILPEK 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
GH +P V++G DSHTCT GAFG FATG G +D G+V TGK +VP T+R + G+
Sbjct: 106 GHVKPNMVIVGADSHTCTHGAFGAFATGFGASDMGYVYATGKTWFRVPETIRVNVTGKNE 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD++L+ E+ +GATY ++E+ G+ V+ L+M+ERM LCNM +E GGK G++ A
Sbjct: 166 N-ISGKDIVLKTCKEVGRSGATYMALEYGGSAVKALNMDERMVLCNMAIEMGGKVGLIEA 224
Query: 309 DGTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA 360
D TT+ YL++ E ++ + ++ FDI+ +E VA PH PDN
Sbjct: 225 DHTTYDYLKNAGVSNQEIAELQRNKISITENEETYFKTVEFDITDMEEQVACPHHPDNVK 284
Query: 361 LARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTL 420
E ID+++IGSCT G D AAK+ ++PA++ +
Sbjct: 285 GISEVLGTPIDQIFIGSCTNGHIGDLRIAAKILKGKSINKNTRLIVIPASKSILKQALN- 343
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF + G +P CG CLG
Sbjct: 344 -------EGLIDIFVDFGA-LICAPGCGPCLG 367
>gi|373107479|ref|ZP_09521778.1| homoaconitate hydratase [Stomatobaculum longum]
gi|371651309|gb|EHO16743.1| homoaconitate hydratase [Stomatobaculum longum]
Length = 417
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 207/387 (53%), Gaps = 29/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
AMT+ EKI +RA+ K ++ GD V +D +M++D + G++ E ++ ++ D+ K
Sbjct: 2 AMTMAEKIIARAAGKTEVHAGDIETVTLDYMMSNDGTTHLTIGMY--ENLKHPRIADKNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH + + + +RDF I ++ + KGVCH +
Sbjct: 60 LVWIVDHNVPADSVKTAASHKKMRDFARANGIAFY-------------EGKGVCH-QIML 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E + PG+ + G DSHTC GA G F TG+G TD + + TG+ + VP TLRF L G +
Sbjct: 106 EKYVSPGQFIFGADSHTCAYGALGAFGTGVGCTDYLYAMVTGQSWVLVPKTLRFELRGSL 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + A+DLIL IIG+I GA YK+MEF G + LS+ +R+ LCN+ VEAG K G+
Sbjct: 166 PQGVYARDLILTIIGKIGANGANYKAMEFGGEGLASLSIADRIALCNLCVEAGAKTGLCE 225
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T YL+ P + D+ A + + D+S++ P+VAKPH DN A EC
Sbjct: 226 VDAKTLDYLKAHGREPVAVLNPDKDADYEEVFEIDLSEIRPIVAKPHFVDNVVPAEECSG 285
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
++ID ++GSC G+ ED A+ L G+KV V +VPA++ V+ +
Sbjct: 286 IRIDEAFLGSCNNGRIEDLRVGAE--LLRGRKVADSVRFLVVPASRAVYEEALR------ 337
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF +AG +P+C C G
Sbjct: 338 --EGLLKIFMDAGA-IVMNPNCSVCWG 361
>gi|433440510|ref|ZP_20408520.1| 3-isopropylmalate dehydratase [Haloferax sp. BAB2207]
gi|432187711|gb|ELK44970.1| 3-isopropylmalate dehydratase [Haloferax sp. BAB2207]
Length = 437
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 204/386 (52%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S S GD V +VD+ M HD+ GP +F F + G++ +++ ++ V
Sbjct: 5 TLAEKLLSEKS-GTDARAGDYVEADVDVAMAHDITGPLAFQTFDEVTGDDGELFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F + F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVQAANNHNAVREFAAKHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF +DG++ D
Sbjct: 112 FVGPGDLVIGADSHSTTYGGIGAFGTGVGSTDLGTALATGELWFRVPKTLRFEVDGDLGD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY + E+ G+T+E L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGCTYMAAEYAGSTIESLPIHERLVLSNMAIEMGGKTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE +T + SD+ A + + + +D + L P V+KP +P+N E
Sbjct: 232 ERTESYLERQTGNEIDLADAFVSDDDAYYEAVHTYDATALAPQVSKPSNPENAVDVTEVA 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
++D++++G+CT G+ ED A + V +VPA++ V+ + V
Sbjct: 292 GTELDQLFVGTCTNGRYEDIKVVADILAGETIAPNVRLVVVPASKSVYQHMLQTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG S CG C G
Sbjct: 348 ----FQTLTDAGA-VIQSAGCGPCAG 368
>gi|336423148|ref|ZP_08603283.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336005319|gb|EGN35365.1| 3-isopropylmalate dehydratase large subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 424
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 222/395 (56%), Gaps = 39/395 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+T+KI + + + G + +D++M +D+ GP + +F++ KV+D++K+
Sbjct: 3 MTMTQKILAAHAGLDSVEAGYLIEAKLDVVMANDITGPMAVPVFRQM---ADKVFDKDKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+++PDH+ D ++ N +R+F EQ + ++Y++ +G + H L ++
Sbjct: 60 ILVPDHFTPNKDIKSAENSKSIREFAKEQGLTHYYEVGQMG----------IEHAILPEK 109
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G GE ++G DSHTCT GA G F+TG+G TD + TG++ KVP ++FVL G+
Sbjct: 110 GITVAGECIIGADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLTGKPG 169
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+I+ IIG I V GA YKSMEFVG + L+M++R T+ NM +EAG KNG+
Sbjct: 170 PYVSGKDIIIHIIGRIGVDGALYKSMEFVGDGIASLTMDDRFTMANMAIEAGAKNGIFLV 229
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD- 367
D +Y+++ + Y+ +D A + + D++K+ P VA PH P N E +
Sbjct: 230 DEKAEEYMKEHSDKEYKIYEADADADYDAVVEVDLAKVRPTVAFPHLPGNAKTIDEIEAM 289
Query: 368 --VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+KID+V IGSCT G+ ED AA V G+KV V ++PATQK++
Sbjct: 290 EPIKIDQVVIGSCTNGRMEDMRRAAAVL--KGRKVHPDVRVMVIPATQKIY--------- 338
Query: 424 GSGGKTCSQ-----IFEEAGCDTPASPSCGACLGG 453
K C + IF +AGC +PSCG C+GG
Sbjct: 339 ----KQCIKEGLVDIFIDAGC-AFNTPSCGPCMGG 368
>gi|257076377|ref|ZP_05570738.1| 3-isopropylmalate dehydratase large subunit [Ferroplasma
acidarmanus fer1]
Length = 413
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 206/386 (53%), Gaps = 31/386 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EKIFS S S GD + NVD +M +D+ P + F E G K +KI+
Sbjct: 4 TAVEKIFSEKSGTDSKS-GDYIVANVDYVMANDITAPIAIDAFN-ELGMKPK---SDKII 58
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
IIPDH++ D + + +DF +E N +FYDI + GVCH + ++G
Sbjct: 59 IIPDHFVPPKDINSAKQYKKSKDFALE-NGTWFYDI----------GHGGVCHQVMMEKG 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG ++ G DSHT T GA +TGIG+T+AG + TGK+ K+P T++ L G+
Sbjct: 108 FAAPGRLIAGADSHTNTYGALSAISTGIGSTEAGVIFATGKMWFKIPETIKINLTGKPGK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KD+IL ++ +I GA YK MEF G ++ + + ERMT+ NM EAG K D
Sbjct: 168 GVEGKDIILHVLSKIKNGGAAYKCMEFSG-NIKYIDINERMTMANMTTEAGAKCSFFDTD 226
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL + + Y+ V SDE A F + D++ +EP +A P+SPDN +A + K
Sbjct: 227 EKTIEYLNQRNTGSYKIVKSDENADFSQTFNIDMNNIEPSIAIPNSPDNVRIASAIHE-K 285
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ YIGSCT G+ ED AA + G+KV V +VPA+Q+V+ +
Sbjct: 286 IDQAYIGSCTNGRIEDIRKAAAIL--KGRKVNRNVRLMVVPASQEVYNQALREGL----- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ I E G + +CGACLGG
Sbjct: 339 --INTIVEAGGY--FSGTTCGACLGG 360
>gi|421065456|ref|ZP_15527206.1| aconitate hydratase domain-containing protein, partial [Pelosinus
fermentans A12]
gi|392458871|gb|EIW35348.1| aconitate hydratase domain-containing protein, partial [Pelosinus
fermentans A12]
Length = 308
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 15/320 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI R +++ ++PG+ + VNVD +M HD+ P F++ E KVW+ +KIV
Sbjct: 4 TLTEKIIMRNTKRSSVTPGELLNVNVDRVMVHDIFAPFVVEKFREMGFE--KVWNPDKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + TS R+ I F EQ+IK + +A+ GVCH + +
Sbjct: 62 FVYDHLVPTSFIEDFRHHKIADAFAAEQHIKAVH--------RAD----GVCHQLMPELR 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ GTDSHT T GA G F+TGIG T+ + GTG++ +KVPPTL+F ++GE+P
Sbjct: 110 YVVPGQVVFGTDSHTTTYGAIGSFSTGIGYTEMAAIFGTGQLWIKVPPTLKFTINGELPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL+I+G+I G TYK++EF G+T++ LS+ RMTL NM VEAG K GV+ D
Sbjct: 170 GVYSKDIILRILGDIGADGGTYKALEFGGSTIKGLSISSRMTLSNMAVEAGAKVGVIEPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF + + S ++ + SD AS+ + +D S +P+VA P + DN + K
Sbjct: 230 EKTFAFSGVEGS-QFQDLKSDPDASYEKVFNYDASTFKPVVACPSNVDNISDVEALLGSK 288
Query: 370 IDRVYIGSCTGGKTEDFLAA 389
ID+ +IGSCT G+ ED A
Sbjct: 289 IDQGFIGSCTNGRFEDLEVA 308
>gi|452850820|ref|YP_007492504.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
piezophilus]
gi|451894474|emb|CCH47353.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
piezophilus]
Length = 419
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 206/391 (52%), Gaps = 35/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI + +++ G V V +++ +D+ P + FK + +V+D++KI
Sbjct: 4 TLAEKILQKHTDQVISGAGQIVQCKVSMVLANDITAPLAIKSFKAMGAQ--EVFDKDKIS 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V ++R+F E I ++Y+ ++G V H L ++G
Sbjct: 62 LVCDHFTPNKDIDSAEQVKVVREFAEEMGITHYYECGEVG----------VEHALLPEKG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ L G
Sbjct: 112 IVGPGNVVIGADSHTCTYGGLGAFATGMGSTDISAAMALGETWFKVPPTIKVNLTGTPGK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ AKD +L IG + V+GA YK++E+ G V+ +S+E RMT+ NM +EAGGK G+ P D
Sbjct: 172 FVGAKDFVLNQIGRLGVSGALYKALEYSGEVVDNMSVEGRMTIANMAIEAGGKVGLFPVD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y E + +D+ A++ D++ + P VA PH PDN + ++
Sbjct: 232 QKTLDYAATAGFSGGEAMVADQDATYERVLEIDVTDMAPQVACPHLPDNVKAVDDTSGLQ 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
I + IGSCT G+ ED AA L G+KV KV ++PAT +W
Sbjct: 292 IHQSIIGSCTNGRIEDMREAAA--LLKGRKVNSKVRCIILPATPSIW------------- 336
Query: 428 KTC-----SQIFEEAGCDTPASPSCGACLGG 453
K C +IF +AGC P+CG CLGG
Sbjct: 337 KACMKEGLMEIFMDAGC-IVGPPTCGPCLGG 366
>gi|282164131|ref|YP_003356516.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
gi|282156445|dbj|BAI61533.1| 3-isopropylmalate dehydratase large subunit [Methanocella
paludicola SANAE]
Length = 417
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 206/386 (53%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S S K + PGD V V VD + D P + +K+ G KV+D +K+
Sbjct: 4 TLAEKILSEKSGK-DVVPGDLVTVPVDFVFGQDGTFPLAIQQMEKDLGTR-KVFDPKKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + E+ + +R F E I +F N D G+CH +A E
Sbjct: 62 AVCDHASPSPSEQVSNVHIFMRKFARENGIHFF----------ENGD--GICHQIVA-EK 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSHTCT GA FATG+G+TD G ++ G L+VP + +F ++G++P
Sbjct: 109 FAAPGKIVIGADSHTCTHGALTAFATGMGSTDVGAIMAYGTTWLRVPESFKFNIEGDLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+ +KD+ L I+ EI+ GATY SME+ G+TV+++S+E R+ L NM VEAGGK G+ PAD
Sbjct: 169 YVTSKDVFLHIVKEITADGATYMSMEYRGSTVDKMSVESRLVLSNMAVEAGGKVGLCPAD 228
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
YL+ Y + +D+ A + E D +KLEP +A PH DN E +
Sbjct: 229 AKVKAYLKAHGRENEYRKIAADKDAVYSDELEVDAAKLEPYIAVPHRVDNVKPVSEVAGM 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSG 426
+D V IGSCT G+ ED AA++ GKK T LV PA+++V L
Sbjct: 289 HLDSVCIGSCTNGRIEDIAVAARIL--KGKKAHKDTRLVVYPASREVLAQAIKLGY---- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ EAG A P CG C+G
Sbjct: 343 ----IETLVEAGAAVGA-PGCGFCIG 363
>gi|147669070|ref|YP_001213888.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides sp.
BAV1]
gi|146270018|gb|ABQ17010.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides sp.
BAV1]
Length = 431
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 203/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 18 TLAEKILSLKS-GSDASAGDIVVSMVDLAFVQDTTGP----LTVREFWDNGFTKLANPLR 72
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 73 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 119
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG FATG+G++D GK +VP T++ V+ G
Sbjct: 120 EKLARPGDVIVGADSHTVTAGGLCAFATGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 179
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 180 KHGLYAKDLILHLIGLIGADGATYKALEFSGNVVNNMTVAERLTIANMAVEAGAKVGLFP 239
Query: 308 ADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +D A + D + LEP ++KPH+ DN A ARE K
Sbjct: 240 SDRQTLEYLRSVGREADYQPLAADADAVYERVIEIDATALEPTISKPHTVDNTATARELK 299
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + + PA+QK++++ L
Sbjct: 300 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRKRHPQTRLIVTPASQKIYLEAIRLGY---- 355
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 356 ----IEILVQAGANI-MPPGCGACLG 376
>gi|297568511|ref|YP_003689855.1| homoaconitate hydratase family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924426|gb|ADH85236.1| homoaconitate hydratase family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 428
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 209/394 (53%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF+ A + +P +N+ +++D++M H++ P + E +V+D +KI
Sbjct: 4 TIVEKIFA-AHRRDTPTP-ENIILDLDVVMCHEITTP--IAVTDLEARGMDRVFDPDKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH D + ILRD+ QNI+ F+DI GVCH ++G
Sbjct: 60 VVIDHVTPAKDSKTATQGKILRDWARRQNIRDFFDIG----------RNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G ++P T++ ++G++P
Sbjct: 110 FIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFRLPRTIKVEINGKLPA 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL II I+V GAT + +EF G V+ +SME RMTLCNM +EAG G+ P D
Sbjct: 170 GVYAKDVILYIIKTITVNGATDRVLEFAGPVVDAMSMEARMTLCNMAIEAGATCGICPPD 229
Query: 310 GTTFKYLE----------DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D+ + + +SD A++ FD+S L P V PD
Sbjct: 230 KTTAEYLWPFIQNDYATVDQAAADFRQWHSDPDAAYEQVLEFDVSTLAPQVTFGFKPDEV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ V +D++YIGSCT G+ ED AAKV +V L PAT KV+
Sbjct: 290 KDITAMEGVPVDQIYIGSCTNGRIEDLREAAKVLKGRRIADQVRGILSPATPKVYNQAME 349
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF+EAG C T +P+CGACLG
Sbjct: 350 --------EGLLKIFQEAGFCVT--NPTCGACLG 373
>gi|160931389|ref|ZP_02078787.1| hypothetical protein CLOLEP_00224 [Clostridium leptum DSM 753]
gi|156869636|gb|EDO63008.1| 3-isopropylmalate dehydratase, large subunit [Clostridium leptum
DSM 753]
Length = 428
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 207/388 (53%), Gaps = 25/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+++KI + + + G + ++D+++ +DV P + F+K + V+ ++K
Sbjct: 2 GMTMSQKILAAHAGLDHVEAGQLIEASLDLVLGNDVTAPVAINEFEKCGAKG--VFSQDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I ++ DH+ D +A +R F + +I ++D+ +G + H L +
Sbjct: 60 IALVMDHFTPNKDIKAAEQTLKVRRFANQYDILNYFDVGRMG----------IEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG +++G DSHTCT GA G F+TG+G+TD + TGK KVP L+F L G+
Sbjct: 110 QGLVGPGSLVIGADSHTCTYGALGAFSTGVGSTDMCAGMMTGKAWFKVPGALKFTLTGKP 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ KD+IL IIG I V GA Y+SMEF G ++ LS+++R+ + NM +EAG KNG+ P
Sbjct: 170 AQWVSGKDVILHIIGMIGVDGALYQSMEFAGDGLQYLSIDDRLCIANMAIEAGAKNGIFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y + +DE A + EY D+S L P VA PH P+N
Sbjct: 230 VDDVTRAYCNGRFQGTPVEYAADEDAVYEKEYVIDLSALRPTVAFPHLPENTRTIDNVGQ 289
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
VKID+V IGSCT G+ D AA L GKKV V + P TQ +++D
Sbjct: 290 VKIDQVVIGSCTNGRLSDLRIAAN--LLKGKKVAKNVRCIVFPGTQTIYLDAMR------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ + F +AG ++P+CG CLGG
Sbjct: 342 --EGLVEAFIQAGA-VVSTPTCGPCLGG 366
>gi|32266635|ref|NP_860667.1| 3-isopropylmalate dehydratase large subunit [Helicobacter hepaticus
ATCC 51449]
gi|38604726|sp|Q7VH31.1|LEUC_HELHP RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|32262686|gb|AAP77733.1| 3-isopropylmalate dehydratase [Helicobacter hepaticus ATCC 51449]
Length = 420
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 210/385 (54%), Gaps = 21/385 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+++KI + + + P D + +D+++ +D+ P + FK+ + KV+D++KI
Sbjct: 3 MTMSQKILADRAGLESVRPNDLIMAKLDMVLGNDITTPVAINAFKE--AKFQKVFDKDKI 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH+ D +A R F + +I ++YD+ ++G V H L ++
Sbjct: 61 SLVMDHFAPNKDIKAATQSAQCRCFAKDFDISHYYDVGNMG----------VEHALLPEQ 110
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G G++++G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G++
Sbjct: 111 GIVTIGDLIIGADSHTCTYGALGAFSTGVGSTDMAVGMATGQAWFKVPYAIKFNLKGKLR 170
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
Y+ KD+IL IIG+I V GA YKSMEF G ++ L++++R+ + NM +EAG KNG+
Sbjct: 171 PYVSGKDVILHIIGKIGVDGALYKSMEFGGEGLKNLTIDDRLCIANMAIEAGAKNGIFEV 230
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T Y + +T + +D A + + D+ + VA PH P+N + ++
Sbjct: 231 DDITISYAKGRTKRDFRIYKADVDAEYEQVFDIDLDSINHTVAFPHLPENTKEKDDWGEI 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V IGSCT G+ D AA++ ++PATQ ++++ +
Sbjct: 291 KIDQVVIGSCTNGRLSDMAVAAEILKDKTIAKNTRCIIIPATQNIYLECIN--------R 342
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
+ F +AG ++P+CG CLGG
Sbjct: 343 GYLETFIKAGA-VVSTPTCGPCLGG 366
>gi|254478927|ref|ZP_05092289.1| 3-isopropylmalate dehydratase, large subunit [Carboxydibrachium
pacificum DSM 12653]
gi|214035149|gb|EEB75861.1| 3-isopropylmalate dehydratase, large subunit [Carboxydibrachium
pacificum DSM 12653]
Length = 388
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 207/372 (55%), Gaps = 26/372 (6%)
Query: 98 LMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQ 157
++ +D+ P + F+K G + KV+D KI ++PDH++ + D ++ V+++R F +
Sbjct: 1 MLGNDITAPVAIKEFEK-IGVD-KVFDNTKIALVPDHFVPSKDIKSAEQVNVMRKFAKKY 58
Query: 158 NIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGI 217
NI F+++ +G + H L ++G PG+V++G DSHTCT GA FATG+
Sbjct: 59 NIVNFFEVGRMG----------IEHALLPEQGLVLPGDVVIGADSHTCTYGALTCFATGV 108
Query: 218 GNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFV 277
G+TD + TGK KVP ++FVL G + ++ KD+IL IIG+I V GA YKSMEF
Sbjct: 109 GSTDMAAAMATGKAWFKVPEAIKFVLKGNLGKWVSGKDVILYIIGKIGVDGALYKSMEFT 168
Query: 278 GTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLS 337
G ++ LS+++R T+ NM +EAG KNG+ D T Y++ + Y+ DE A +
Sbjct: 169 G-NIKALSIDDRFTIANMAIEAGAKNGIFDFDEITEAYVKKRAKREYKVFERDEDAEYSE 227
Query: 338 EYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASG 397
++ + P VA PH P+N E VKID+V IGSCT G+ D A ++ G
Sbjct: 228 VIEINLDDIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYRIL--KG 285
Query: 398 KKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
KKV V + PATQ+++++ + + F +AG ++P+CG CLGG
Sbjct: 286 KKVHPDVRLIIFPATQEIYLECVK--------RGYIEEFIKAGAAV-STPTCGPCLGGHM 336
Query: 456 DTYARMNEPMAS 467
A+ +A+
Sbjct: 337 GVLAKGERALAT 348
>gi|298530263|ref|ZP_07017665.1| 3-isopropylmalate dehydratase, large subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509637|gb|EFI33541.1| 3-isopropylmalate dehydratase, large subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 419
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 200/384 (52%), Gaps = 21/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
L EKI + S + PG + V +++ +D+ P + F+K + +V+D +KI
Sbjct: 4 NLAEKILQKHSPEEIKKPGQIIPCRVSLVLANDITAPLAVDSFRKM--QAPRVFDADKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V +R F E NI ++Y+ ++G V H L + G
Sbjct: 62 LVCDHFTPNKDIASAEQVQKVRRFAREMNITHYYEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVP T+R ++G + +
Sbjct: 112 LVGPGDVVVGADSHTCTYGGLGAFATGMGSTDIAAAMALGETWFKVPETIRVNMNGSLDE 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL +IG I V GA Y+++EF G T+ L E RMT+ NM +EAGGK G+ P D
Sbjct: 172 FTTSKDLILNLIGRIKVDGALYRALEFAGDTLPELDAEARMTMANMAIEAGGKAGLFPVD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y + L + D +A + + +S + P +A PH PDN + +++K
Sbjct: 232 QVTLDYCREHGRLGDHLLEPDGQAGYCMQVDMQVSGMPPQIACPHLPDNVTGVDDLEEIK 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V +GSCT G+ D AA + V ++PAT K++ +
Sbjct: 292 VDQVVLGSCTNGRISDLRQAAHILKDRKVNKNVRFIVLPATPKIYAQALE--------EG 343
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+IF +AG P+CG CLGG
Sbjct: 344 LLEIFLKAG-GIIGPPTCGPCLGG 366
>gi|260892979|ref|YP_003239076.1| 3-isopropylmalate dehydratase [Ammonifex degensii KC4]
gi|260865120|gb|ACX52226.1| 3-isopropylmalate dehydratase [Ammonifex degensii KC4]
Length = 418
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 210/385 (54%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SRA+ + Q+ G+ V VD +M D P + +F++ G+ K +D E++
Sbjct: 4 TIAEKILSRAAGR-QVQAGEIVVARVDQVMAQDGTAPLAIQVFRQMGGK--KPFDPERVN 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + ++R+F E + YDI D GVCH + + G
Sbjct: 61 LVIDHSAPSPTESISNLHKMMREFAWEHGCR-LYDIGD-----------GVCHQVMVESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHTCT GA G FATG+G+TD L +G + KVP T++ V G +P
Sbjct: 109 RVGPGCVVVGADSHTCTYGALGAFATGVGSTDLAAALISGHLWFKVPETIKVVCHGPLPP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG + GATYK++E+ G+ ++ LSME R T+ NM VE G K G++ D
Sbjct: 169 GVFAKDLILYLIGRFTADGATYKAVEYTGSAIKELSMEGRFTVANMAVEMGAKVGLMEVD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T+++L++ + D A++ FD++ + P VA PH DN + + K
Sbjct: 229 EKTWEWLKEHGGGEFTAFSPDPDAAYAKVVEFDLTSISPQVACPHRVDNVSPIEKVAGTK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ +IG+CT G+ ED AA++ +G+K+ +V + PA++KV++ + +
Sbjct: 289 IDQAFIGTCTNGRLEDLRVAARIL--AGRKIHPRVRLVVAPASRKVYLQAMREGILAT-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG +P CG C+G
Sbjct: 345 ------LVEAGAAV-VTPGCGPCVG 362
>gi|239906236|ref|YP_002952976.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
magneticus RS-1]
gi|239796101|dbj|BAH75090.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
magneticus RS-1]
Length = 419
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 210/401 (52%), Gaps = 27/401 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI + ++ PG V + +++ +D+ P + FKK A V+D++K+
Sbjct: 4 TLAEKILQQHCDEQITGPGQIVRCRLSLVLANDITAPLAIKSFKKM--GAAGVFDKDKVT 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + V + R+F E I ++++ ++G V H L + G
Sbjct: 62 IVADHFTPNKDIESAEQVKVCREFAKEMGITHYFEGGNVG----------VEHALLPELG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ KVPPT++ +L G +
Sbjct: 112 LVGPGDVVIGADSHTCTYGGLGAFATGMGSTDVAAGMALGETWFKVPPTIQVILTGTLRQ 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ AKDL+L +IG I V+GA YK++EFVG LS+E RMT+ NM +EAGGK G+ AD
Sbjct: 172 WVGAKDLMLALIGTIGVSGALYKALEFVGPLASALSVEGRMTMSNMAIEAGGKVGLFAAD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y + + +D A++ D + +EP +A PH PDN +K
Sbjct: 232 DKTLAYAAAHGRKGDKAIAADAGAAYERVVTIDATGMEPQIACPHLPDNVKPVSAVAGLK 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+ IGSCT G+ ED AA + G+KV V T ++PAT +W
Sbjct: 292 VDQAVIGSCTNGRIEDLREAAAIL--KGRKVSKDVRTIILPATPNIWRQALA-------- 341
Query: 428 KTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC PA +CG CLGG A +A+
Sbjct: 342 EGLIETFMDAGCIVGPA--TCGPCLGGHMGILAGGERAIAT 380
>gi|73748290|ref|YP_307529.1| 3-isopropylmalate dehydratase large subunit [Dehalococcoides sp.
CBDB1]
gi|73660006|emb|CAI82613.1| homoaconitate hydratase family protein [Dehalococcoides sp. CBDB1]
Length = 417
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 203/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 4 TLAEKILSLKS-GSDASAGDIVVSMVDLAFVQDTTGP----LTVREFWDNGFTKLANPSR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 59 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG FATG+G++D GK +VP T++ V+ G
Sbjct: 106 EKLARPGDVIVGADSHTVTAGGLCAFATGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 166 KHGLYAKDLILHLIGLIGADGATYKALEFSGNVVNNMTVAERLTIANMAVEAGAKVGLFP 225
Query: 308 ADGTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +D A + D + LEP ++KPH+ DN A ARE K
Sbjct: 226 SDRQTLEYLCSVGREADYQPLAADVDAVYERVIEIDATALEPTISKPHTVDNTATARELK 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + + PA+QK++++ L
Sbjct: 286 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRKRHPQTRLIVTPASQKIYLEAIRLGY---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 342 ----IEILVQAGANI-MPPGCGACLG 362
>gi|373107481|ref|ZP_09521780.1| homoaconitate hydratase [Stomatobaculum longum]
gi|371651311|gb|EHO16745.1| homoaconitate hydratase [Stomatobaculum longum]
Length = 415
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 213/389 (54%), Gaps = 34/389 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EK+ + A + PGD V V D +M D+ P F+ E G +VWD EK+
Sbjct: 3 MTMIEKLIA-AKVGHAVKPGDIVTVGADRVMLDDIMMPFIAAKFE-EMGFQ-EVWDPEKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VII DH + S VD +R + + Y I +L G+CH + +
Sbjct: 60 VIICDHLVPAS------QVDDIRAYKLSNEFAAKYGIPNLHR------SDGICHQLMTEA 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G+ +PG+++ GTDSHT T G G F+TGIG T+ VLGTG++ L+VP T+R ++G++P
Sbjct: 108 GYVKPGDLVFGTDSHTTTYGCVGAFSTGIGYTEMAAVLGTGEIWLRVPETIRIEINGKLP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++KD+IL+IIG+++ AGATY+++EF G TVE +S+ RMT+ NM +EAG K +
Sbjct: 168 ANVMSKDVILRIIGDLTAAGATYRALEFTGDTVEAMSLSSRMTMANMGIEAGAKCALFAP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL + + + D A R+ P++A P + D+ A R+ + V
Sbjct: 228 DEKTAEYLGIELTAAERALAGDADAPCARVLRYCAEDFVPVMALPSNVDHVAAIRDLEPV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVY---TLPVP 423
ID+V++GSCT G+ ED +AAA++ GK + V + PA++K+W + TL +
Sbjct: 288 AIDQVFLGSCTNGRLEDLMAAAEIL--KGKHIAPFVKLIVTPASRKIWEEAEANGTLAIL 345
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ G + PSCG C G
Sbjct: 346 SAAGAMITH------------PSCGLCCG 362
>gi|436841919|ref|YP_007326297.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170825|emb|CCO24196.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 419
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 205/385 (53%), Gaps = 23/385 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI +E+ G V NV +++ +D+ P + F+ E +V+D++K+
Sbjct: 4 TLAEKILQAHTEETVKEAGQIVRCNVSMVLANDITAPLAIKSFRAMGAE--QVFDKDKVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V ++R+F E+N+ ++Y+ ++G V H L + G
Sbjct: 62 LVCDHFTPNKDIDSAEQVKLVREFAHEKNVTHYYEGGEVG----------VEHALLPEMG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
P ++++G DSHTCT G G FATG+G+TD + G+ KVPP+++ ++G
Sbjct: 112 LVGPSDIVIGADSHTCTYGGLGAFATGMGSTDIAGAMALGETWFKVPPSIKVEIEGTPDQ 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ AKD IL +IG I V+GA YK++EF G+ V+ LS+E RMT+ NM +EAGGK G+ P D
Sbjct: 172 HVGAKDYILNLIGNIGVSGALYKALEFSGSVVDDLSIEGRMTIANMAIEAGGKVGLFPVD 231
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + +DE A + +++ ++P +A PH PDN E K++K
Sbjct: 232 AKTLEYCTAAGRTGDVELRADEGAVYERVVSINVTGMKPQIACPHLPDNVKPVDEVKNMK 291
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + IGSCT G+ D AA + V ++PAT +W +
Sbjct: 292 IHQSVIGSCTNGRISDLREAAAILKGRKADKNVRLIILPATPSIWKQALK--------EG 343
Query: 430 CSQIFEEAGCDT-PASPSCGACLGG 453
+IF +AG PA +CG CLGG
Sbjct: 344 LLEIFMDAGAIVGPA--TCGPCLGG 366
>gi|332800219|ref|YP_004461718.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438003546|ref|YP_007273289.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332697954|gb|AEE92411.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432180340|emb|CCP27313.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 423
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 204/386 (52%), Gaps = 27/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI ++A+ K ++ G+ V +D +D+ + + E G KVWD++K+
Sbjct: 1 MHAIEKILAKAAGKDEVHAGEIVNCRIDFAEINDLYLQTIYSFY--EMG-GEKVWDKDKV 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DHY + + +R F EQ + +DI GVCH LA+
Sbjct: 58 AFVFDHYSPAPTINSAQIHKEMRQFAKEQGFAHHFDIN-----------TGVCHQVLAES 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +L+ TDSHT T GAFG F TGIG TD VL +G++ +VP ++ ++G++
Sbjct: 107 GIVWPGMILVATDSHTTTHGAFGAFGTGIGATDMATVLISGELWFRVPEVIKIEINGQLQ 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD+IL IIG++ A YK++EF G +E L + +RMT+CNM VE G K +
Sbjct: 167 EGVYAKDVILHIIGKLKADAAVYKAIEFCGNYIENLDVADRMTICNMAVEMGAKTAYMKP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ F+YL + + + +D + Y FD+SKL P +A PHS DN V
Sbjct: 227 NDKVFEYLSTRMNEEFVIEETDLDYDYSETYVFDVSKLSPQLAVPHSVDNVYSIENVDKV 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSG 426
KI++ +IGSCTGG+ ED AA K+ +GKK+ T ++PA+ +V+ L
Sbjct: 287 KINQAFIGSCTGGRIEDIEAAFKIL--NGKKIHPDTRLIIIPASTEVFQHAMKLGYI--- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
Q +AG T ASP CG CLG
Sbjct: 342 -----QSLVKAGA-TFASPGCGPCLG 361
>gi|167765906|ref|ZP_02437959.1| hypothetical protein CLOSS21_00397 [Clostridium sp. SS2/1]
gi|167712404|gb|EDS22983.1| homoaconitate hydratase family protein [Clostridium sp. SS2/1]
Length = 423
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 207/387 (53%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RA++ Q+ G+ + VD LM++D + ++ + ++ K+ D++K
Sbjct: 9 GMTIGEKIIARAAKVDQVKAGEIHTIEVDRLMSNDGTTHLTIDMYHNQL-KHPKIADKDK 67
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH + + + +R+F E IK + + KGVCH +
Sbjct: 68 LVFIMDHNVPAENPKTAAAHRKMRNFAKEHEIKLY-------------EGKGVCH-QIMV 113
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E H PGE ++G DSHTCT GA G F TGIG TD + + TG+ + VP T+RF L G++
Sbjct: 114 ENHVCPGEFIMGADSHTCTYGALGAFGTGIGCTDFLYAMVTGQSWVLVPDTIRFNLHGKL 173
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + A+DL+L IIG + G YK MEF G L ++ER+ LCN+ VEAG K G+V
Sbjct: 174 REGVYARDLMLSIIGMVGANGCNYKIMEFAGEGAHNLDIDERLVLCNLAVEAGAKTGIVE 233
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + SD+ A F Y ++ +++P+VA+PH D+ A+E KD
Sbjct: 234 PDEKVVEYVESRGRKAENLFKSDDDAVFEKVYDINLDEIKPVVARPHQIDDVVDAKEVKD 293
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
VKID ++GSC G+ E+ AA++ GKKV V + PA+ +V+M
Sbjct: 294 VKIDEAFLGSCNNGRIEELRVAAEIL--KGKKVSDSVRFLIAPASNEVYMQALD------ 345
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G + +C C G
Sbjct: 346 --EGLIDIFMESGA-MVMNCNCSVCWG 369
>gi|291559804|emb|CBL38604.1| 3-isopropylmalate dehydratase, large subunit [butyrate-producing
bacterium SSC/2]
Length = 416
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 28/386 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI +RA++ Q+ G+ + VD LM++D + ++ + ++ K+ D++K+
Sbjct: 3 MTIGEKIIARAAKVDQVKAGEIHTIEVDRLMSNDGTTHLTIDMYHNQL-KHPKIADKDKL 61
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V I DH + + + +R+F E IK + + KGVCH + E
Sbjct: 62 VFIMDHNVPAENPKTAAAHRKMRNFAKEHEIKLY-------------EGKGVCH-QIMVE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
H PGE ++G DSHTCT GA G F TGIG TD + + TG+ + VP T+RF L G++
Sbjct: 108 NHVCPGEFIMGADSHTCTYGALGAFGTGIGCTDFLYAMVTGQSWVLVPDTIRFNLHGKLR 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + A+DL+L IIG + G YK MEF G L ++ER+ LCN+ VEAG K G+V
Sbjct: 168 EGVYARDLMLSIIGMVGANGCNYKIMEFAGEGAHNLDIDERLVLCNLAVEAGAKTGIVEP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +Y+E + SD+ A F Y ++ +++P+VA+PH D+ A+E KDV
Sbjct: 228 DEKVVEYVESRGRKAENLFKSDDDAVFEKVYDINLDEIKPVVARPHQIDDVVDAKEVKDV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID ++GSC G+ E+ AA++ GKKV V + PA+ +V+M
Sbjct: 288 KIDEAFLGSCNNGRIEELRVAAEIL--KGKKVSDSVRFLIAPASNEVYMQALD------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G + +C C G
Sbjct: 339 -EGLIDIFMESGA-MVMNCNCSVCWG 362
>gi|429763178|ref|ZP_19295534.1| putative homoaconitate hydratase [Anaerostipes hadrus DSM 3319]
gi|429179353|gb|EKY20607.1| putative homoaconitate hydratase [Anaerostipes hadrus DSM 3319]
Length = 423
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 207/387 (53%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RA++ Q+ G+ + VD LM++D + ++ + ++ K+ D++K
Sbjct: 9 GMTIGEKIIARAAKVDQVKAGEIHTIEVDRLMSNDGTTHLTIDMYHNQL-KHPKIADKDK 67
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH + + + +R+F E IK + + KGVCH +
Sbjct: 68 LVFIMDHNVPAENPKTAAAHRKMRNFAKEHEIKLY-------------EGKGVCH-QIMV 113
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E H PGE ++G DSHTCT GA G F TGIG TD + + TG+ + VP T+RF L G++
Sbjct: 114 ENHVCPGEFIMGADSHTCTYGALGAFGTGIGCTDFLYAMVTGQSWVLVPDTIRFNLHGKL 173
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + A+DL+L IIG + G YK MEF G L ++ER+ LCN+ VEAG K G+V
Sbjct: 174 REGVYARDLMLSIIGMVGANGCNYKIMEFAGEGAHNLDIDERLVLCNLAVEAGAKTGIVE 233
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + SD+ A F Y ++ +++P+VA+PH D+ A+E KD
Sbjct: 234 PDEKVVEYVESRGRKAENLFKSDDDAVFEKVYDINLDEIKPVVARPHQIDDVVDAKEVKD 293
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
VKID ++GSC G+ E+ AA++ GKKV V + PA+ +V+M
Sbjct: 294 VKIDEAFLGSCNNGRIEELRVAAEIL--KGKKVSDSVRFLIAPASNEVYMQALD------ 345
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G + +C C G
Sbjct: 346 --EGLIDIFMESGA-MVMNCNCSVCWG 369
>gi|291545690|emb|CBL18798.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus sp.
SR1/5]
Length = 416
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 199/370 (53%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V++D LM++D + ++ + +N + D +K+V I DH + + +
Sbjct: 19 VKPGDIYTVSLDHLMSNDGTTHLTVDMYNNKL-KNPHIADTKKLVFIVDHNVPSDSPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E NI ++ + KGVCH + E + RPG+++ G DSHT
Sbjct: 78 ASQKKMRDFARENNIDFW-------------EGKGVCH-QIMIENYVRPGQLIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG + VP T++F L G++P+ + A+DLIL IIGEI
Sbjct: 124 CSYGALGAFGTGVGCTDFLYGMVTGTSWVMVPETVKFNLTGKLPEGVYARDLILTIIGEI 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y++MEF G LS+ +RM LCNM VEAG K G+ AD +YL++ P
Sbjct: 184 GANGCNYQAMEFAGEGARTLSISDRMALCNMAVEAGAKTGIFEADDKALEYLKEHGREPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A + EY FD+SK+ P+VAKP DN A E +KI+ ++GSC G+ E
Sbjct: 244 AVYHSDPDAVYAREYTFDLSKVRPVVAKPDFVDNVVPAEETCGIKINEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A+V GKKV V +VPA+Q ++ + IF EAG
Sbjct: 304 DLRVGAEVI--KGKKVAEGVRFLVVPASQTIYRQALK--------EGLIDIFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|317470390|ref|ZP_07929780.1| homoaconitate hydratase [Anaerostipes sp. 3_2_56FAA]
gi|316902118|gb|EFV24042.1| homoaconitate hydratase [Anaerostipes sp. 3_2_56FAA]
Length = 413
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 207/387 (53%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RA+ P++ G+ V +D LM++D + ++ + ++ K+ D++K
Sbjct: 2 GMTIGEKIIARAARVPEVKAGEIHTVELDRLMSNDGTTHLTIDMYHNDL-KHPKIADKDK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH I + + +R+F E +I ++ + KGVCH + +
Sbjct: 61 LVFIIDHNIPAENPKTAEAHRKMRNFAREHDIAFY-------------EGKGVCHQIMVE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+ C PGE+++G DSHTCT GA G F TGIG TD + + TG + VP T+RF L G++
Sbjct: 108 DYVC-PGELIMGADSHTCTYGALGAFGTGIGCTDFLYGMVTGTSWVMVPETIRFELTGKL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + A+DLIL IIG + G YK MEF G +LS+ ER+ LCN+ VEAG K G+V
Sbjct: 167 REGVYARDLILSIIGMVGANGCNYKIMEFAGEGAHKLSINERLVLCNLAVEAGAKTGIVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + SDE A F Y ++ ++EP+VA+PH D+ E D
Sbjct: 227 PDEKVVEYVESRGRKAENLFVSDEDARFEKVYHINLDEIEPVVARPHLIDDVVPVEEAGD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID ++GSC G+ ++ AA++ GKKV V + PA+ +V++
Sbjct: 287 VKIDEAFLGSCNNGRIDELRLAAEIL--KGKKVHEGVRFLIAPASNEVYVQALD------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF EAG S +C C G
Sbjct: 339 --EGLIDIFVEAGAMVMNS-NCSVCWG 362
>gi|421058154|ref|ZP_15520878.1| homoaconitate hydratase family protein, partial [Pelosinus
fermentans B3]
gi|392461353|gb|EIW37557.1| homoaconitate hydratase family protein, partial [Pelosinus
fermentans B3]
Length = 403
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 212/387 (54%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RAS K + PG+ + VD+ M++D + IF+ + + KV+D EK
Sbjct: 2 GMTMGEKILARASGKDLVKPGEIITAKVDLCMSNDGTTHLNIDIFENQL-KAEKVFDPEK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++ I DH + + + + +R F + +I ++ + GVCH +
Sbjct: 61 VIFIVDHNVPSESAKTAQVHKKMRIFAQKHDIPFY-------------EGTGVCH-QIMI 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E PG++++ DSHTC+ G G F TG+G TD V+ TG++ L VP TL+F ++G
Sbjct: 107 EDFVVPGQLVIAADSHTCSYGGLGAFGTGVGCTDFTSVMHTGEIWLMVPETLKFEIEGSF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ A+DLIL+IIG+I GA Y+ MEF G V++ ++++R+ LCNM VEAG K G+V
Sbjct: 167 KAGVYARDLILKIIGDIGANGANYRIMEFGGPAVKKFTVDDRVVLCNMAVEAGAKTGLVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E + SDE A + Y++++ +LEP++A PH D+ + D
Sbjct: 227 PDQTAIDYVEARGRHDMNLFTSDEDAVYEKTYQYNLDELEPMIAIPHCVDDVVGVTQIGD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+ +IGSC G+ E+ AAA++ GKK+ V + PA++ V+++
Sbjct: 287 VKIDQGFIGSCNNGRIEELRAAAQIL--QGKKIDPYVKLLISPASKAVFLEALA------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G +P+C C G
Sbjct: 339 --EGLIDIFVESGA-MVLNPNCSVCWG 362
>gi|293604943|ref|ZP_06687340.1| 3-isopropylmalate dehydratase large subunit [Achromobacter
piechaudii ATCC 43553]
gi|292816771|gb|EFF75855.1| 3-isopropylmalate dehydratase large subunit [Achromobacter
piechaudii ATCC 43553]
Length = 427
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 204/392 (52%), Gaps = 39/392 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ + A +P + G+ V VD+ M HD GP +E G A +WD +IV
Sbjct: 11 TLAQKLIAAACGRPFVDEGEIVTCTVDLAMFHDSSGPRRLQPMLQELG--ATLWDPSRIV 68
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ SD+ + R V I RD+ +Q + YD G+CH+ + Q G
Sbjct: 69 LVIDHYVPESDDESRRIVRIARDWAAQQQLPNVYD------------SVGICHVVVPQHG 116
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V TG++ +KVP TL +G +
Sbjct: 117 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVTGQIWVKVPATLMMRWNGRLSA 176
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L +IG + G Y++++F G V LSM+ERMTL NM E G + G++ D
Sbjct: 177 GVTAKDMMLHMIGRHGMNGGRYQAVQFCGEAVSALSMQERMTLSNMSAELGSQVGLIAPD 236
Query: 310 GTTFKYLED-----KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
TT YL + + L +D +A + + FD + L P VA PHSP N +
Sbjct: 237 ETTAAYLREAGVTQELDLARWQSDADAQAEW---HDFDAAALPPQVAAPHSPANARAVDQ 293
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWMDVYTL 420
DV + YIG+CTG K +D AAA V LA+G ++ V PA+++ D
Sbjct: 294 YADVPLQVAYIGACTGAKLDDLRAAASVLRGRRLAAGMRLMV----APASRQ---DQQQA 346
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G Q EAG + A+ SCGAC G
Sbjct: 347 EQEG-----VMQALREAGAEVLAT-SCGACAG 372
>gi|452204732|ref|YP_007484861.1| aconitase/homoaconitase/3-isopropylmalate dehydratase, large
subunit [Dehalococcoides mccartyi BTF08]
gi|452111788|gb|AGG07519.1| aconitase/homoaconitase/3-isopropylmalate dehydratase, large
subunit [Dehalococcoides mccartyi BTF08]
Length = 417
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 203/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 4 TLAEKILSLKS-GSDASAGDIVVSMVDLAFVQDTTGP----LTVREFWDNGFTKLANPLR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 59 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG FATG+G++D GK +VP T++ V+ G
Sbjct: 106 EKLARPGDVIVGADSHTVTAGGLCAFATGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 166 KHGLYAKDLILHLIGLIGADGATYKALEFSGNVVNNMTVAERLTIANMAVEAGAKVGLFP 225
Query: 308 ADGTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +D A + D + LEP ++KPH+ DN A ARE K
Sbjct: 226 SDRQTLEYLCSVGREADYQPLAADVDAVYERVIEIDATALEPTISKPHTVDNTATARELK 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + + PA+QK++++ L
Sbjct: 286 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRKRHPQTRLIVTPASQKIYLEAIRLGY---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 342 ----IEILVQAGANI-MPPGCGACLG 362
>gi|452203296|ref|YP_007483429.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides
mccartyi DCMB5]
gi|452110355|gb|AGG06087.1| 3-isopropylmalate dehydratase, large subunit [Dehalococcoides
mccartyi DCMB5]
Length = 417
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 203/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 4 TLAEKILSLKS-GSDASAGDIVVSMVDLAFVQDTTGP----LTVREFWDNGFTKLANPLR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 59 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG FATG+G++D GK +VP T++ V+ G
Sbjct: 106 EKLARPGDVIVGADSHTVTAGGLCAFATGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 166 KHGLYAKDLILHLIGLIGADGATYKALEFSGNVVNNMTVAERLTIANMAVEAGAKVGLFP 225
Query: 308 ADGTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +D A + D + LEP ++KPH+ DN A ARE K
Sbjct: 226 SDRQTLEYLCSVGREADYQPLAADVDAVYERVIEIDATALEPTISKPHTVDNTATARELK 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + + PA+QK++++ L
Sbjct: 286 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRKRHPQTRLIVTPASQKIYLEAIRLGY---- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 342 ----IEILVQAGANI-MPPGCGACLG 362
>gi|167748771|ref|ZP_02420898.1| hypothetical protein ANACAC_03545 [Anaerostipes caccae DSM 14662]
gi|167651741|gb|EDR95870.1| homoaconitate hydratase family protein [Anaerostipes caccae DSM
14662]
Length = 414
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 214/388 (55%), Gaps = 34/388 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + +SPG V VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TIIEKIIKRNTGTESVSPGQIVTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S V+ +R F + Y +K++ G+CH + + G
Sbjct: 62 LIYDHLVPAS------AVEDIRHFKIGDAFVKKYGLKNIHR------SDGICHQLMTECG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+++ GTDSHT T G G F++GIG T+ +LGTG++ ++VP T++ V+DG++PD
Sbjct: 110 YAKPGDIVFGTDSHTTTYGCVGCFSSGIGYTEMASILGTGEMWVRVPETIKVVIDGKLPD 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL++IG++ GATYK++EF G+TVE +S+ RMT+ NM +EAG K + D
Sbjct: 170 NVSSKDIILRLIGDLGADGATYKALEFSGSTVEEMSVASRMTISNMAIEAGAKAALFAPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E + S + +Y DE A + + L P+VA P D E + +
Sbjct: 230 EKTAEYSEVELS-DVDWIYGDEDAEYCRTVVYKAEDLVPVVACPSQVDKIKPVSEVEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYT---LPVPG 424
+D+++IGSCT G+ ED AAA++ GKKV V + PA++K++++ L +
Sbjct: 289 LDQIFIGSCTNGRLEDLKAAAEIL--DGKKVADFVKLIVTPASRKIYIEASKAGYLKILA 346
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
G +Q P CG C G
Sbjct: 347 KAGAIITQ------------PGCGLCCG 362
>gi|421069006|ref|ZP_15530190.1| homoaconitate hydratase family protein, partial [Pelosinus
fermentans A12]
gi|392437469|gb|EIW15352.1| homoaconitate hydratase family protein, partial [Pelosinus
fermentans A12]
Length = 405
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 212/387 (54%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RAS K + PG+ + VD+ M++D + IF+ + + KV+D EK
Sbjct: 2 GMTMGEKILARASGKDLVKPGEIITAKVDLCMSNDGTTHLNIDIFENQL-KAEKVFDPEK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++ I DH + + + + +R F + +I ++ + GVCH +
Sbjct: 61 VIFIVDHNVPSESAKTAQVHKKMRIFAQKHDIPFY-------------EGTGVCH-QIMI 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E PG++++ DSHTC+ G G F TG+G TD V+ TG++ L VP TL+F ++G
Sbjct: 107 EDFVVPGQLVIAADSHTCSYGGLGAFGTGVGCTDFTSVMHTGEIWLMVPETLKFEIEGSF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ A+DLIL+IIG+I GA Y+ MEF G V++ ++++R+ LCNM VEAG K G+V
Sbjct: 167 KAGVYARDLILKIIGDIGANGANYRIMEFGGPAVKKFTVDDRVVLCNMAVEAGAKTGLVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E + SDE A + Y++++ +LEP++A PH D+ + D
Sbjct: 227 PDQTAIDYVEARGRHDMNLFTSDEDAVYEKTYQYNLDELEPMIAIPHCVDDVVGVTQIGD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+ +IGSC G+ E+ AAA++ GKK+ V + PA++ V+++
Sbjct: 287 VKIDQGFIGSCNNGRIEELRAAAQIL--QGKKIDPYVKLLISPASKAVFLEALA------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G +P+C C G
Sbjct: 339 --EGLIDIFVESGA-MVLNPNCSVCWG 362
>gi|289524277|ref|ZP_06441131.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502449|gb|EFD23613.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 419
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 208/393 (52%), Gaps = 26/393 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
++TEKI + SE+ PGD + V VD+L+ +D+ GP + +F K + +V+D+ KI
Sbjct: 4 SITEKILAAHSEQGDFKPGDIIDVTVDMLLMNDITGPVAVEVFDKM--GDGEVFDKNKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH+ D + + +RDF + IK+FYD G+ H+ L ++G
Sbjct: 62 IVLDHFTPNKDVTSAKLCKTMRDFAAAKEIKHFYDAG-----------YGIEHVVLPEDG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++++G DSHT T GA G F+TG+G+TD ++ GK LKVP ++ +L G
Sbjct: 111 IVKPGDLIIGGDSHTVTYGALGAFSTGMGSTDVAGIMALGKTWLKVPEQIKVLLVGLPNK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL +I + GA KS+EF G + L+M+ R ++CNM VE G NG+ D
Sbjct: 171 WVSGKDVILYVISLLGTDGALGKSLEFDGPGAKHLNMDSRFSICNMAVECGAINGIFNFD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E + SD A + D+ +LEP+VA PH P E D++
Sbjct: 231 DVTKEYTESLGLKDFCEYRSDSDAVYKKVIDVDLGELEPIVAMPHLPSRGVPVSEVNDIE 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+ +IGSCT G+ D A+++ GKK+ +V + P ++KV+
Sbjct: 291 IDQSFIGSCTNGRITDLRIASEI--VKGKKIHPRVRGLIAPGSRKVFAQALK-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ +IF E+G T P CG C GG A+
Sbjct: 341 EGLIEIFTESGF-TILPPGCGPCFGGHMGILAK 372
>gi|392962044|ref|ZP_10327491.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
DSM 17108]
gi|421056101|ref|ZP_15519028.1| homoaconitate hydratase family protein [Pelosinus fermentans B4]
gi|421072921|ref|ZP_15534025.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
A11]
gi|392438517|gb|EIW16340.1| homoaconitate hydratase family protein [Pelosinus fermentans B4]
gi|392445348|gb|EIW22680.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
A11]
gi|392452802|gb|EIW29707.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
DSM 17108]
Length = 418
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 212/387 (54%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RAS K + PG+ + VD+ M++D + IF+ + + KV+D EK
Sbjct: 2 GMTMGEKILARASGKDLVKPGEIITAKVDLCMSNDGTTHLNIDIFENQL-KAEKVFDPEK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++ I DH + + + + +R F + +I ++ + GVCH +
Sbjct: 61 VIFIVDHNVPSESAKTAQVHKKMRIFAQKHDIPFY-------------EGTGVCH-QIMI 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E PG++++ DSHTC+ G G F TG+G TD V+ TG++ L VP TL+F ++G
Sbjct: 107 EDFVVPGQLVIAADSHTCSYGGLGAFGTGVGCTDFTSVMHTGEIWLMVPETLKFEIEGSF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ A+DLIL+IIG+I GA Y+ MEF G V++ ++++R+ LCNM VEAG K G+V
Sbjct: 167 KAGVYARDLILKIIGDIGANGANYRIMEFGGPAVKKFTVDDRVVLCNMAVEAGAKTGLVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T Y+E + SDE A + Y++++ +LEP++A PH D+ + D
Sbjct: 227 PDQTAIDYVEARGRHDMNLFTSDEDAVYEKTYQYNLDELEPMIAIPHCVDDVVGVTQIGD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+ +IGSC G+ E+ AAA++ GKK+ V + PA++ V+++
Sbjct: 287 VKIDQGFIGSCNNGRIEELRAAAQIL--QGKKIDPYVKLLISPASKAVFLEALA------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G +P+C C G
Sbjct: 339 --EGLIDIFVESGA-MVLNPNCSVCWG 362
>gi|153810127|ref|ZP_01962795.1| hypothetical protein RUMOBE_00508 [Ruminococcus obeum ATCC 29174]
gi|149833306|gb|EDM88387.1| homoaconitate hydratase family protein [Ruminococcus obeum ATCC
29174]
Length = 416
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 201/370 (54%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D LM++D + ++K + + + D +K+V I DH + + +
Sbjct: 19 VKPGDIHTVQLDRLMSNDGTTHLTVDMYKNKL-NHPHIADTKKLVFIVDHNVPSDCPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E NI ++ + KGVCH + E + RPGE++ G DSHT
Sbjct: 78 ASQKKMRDFAKENNIDFW-------------EGKGVCHQVMI-ENYVRPGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG + VP +++F L G++P+ + A+DLIL IIGE+
Sbjct: 124 CSYGALGAFGTGVGCTDFLYGMVTGTSWVLVPESVKFNLTGKLPEGVTARDLILTIIGEV 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + LS+ +RMTLCNM VEAG K G+ AD +YL++ P
Sbjct: 184 GANGCNYQVMEFTGEGAKTLSISDRMTLCNMAVEAGAKTGIFEADEKAMEYLKEHGREPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A ++ EY FD+SK+ P+VAKP DN A E ++I+ ++GSC G+ E
Sbjct: 244 AVFHSDPDAKYVREYTFDLSKVRPVVAKPDFVDNVVPAEEACGIEINEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A++ GKKV KV +VPA+Q ++ + IF EAG
Sbjct: 304 DLRVGAEII--KGKKVSDKVRFLVVPASQTIYRQALK--------EGLIDIFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|116754099|ref|YP_843217.1| 3-isopropylmalate dehydratase [Methanosaeta thermophila PT]
gi|116665550|gb|ABK14577.1| 3-isopropylmalate dehydratase, large subunit [Methanosaeta
thermophila PT]
Length = 382
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 195/356 (54%), Gaps = 29/356 (8%)
Query: 99 MTHDVCGPGSFGIFKKEFGE--NAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCME 156
M+HD G+ + K F E + KVWD+ +IVI DH + ++E A +R +
Sbjct: 1 MSHD----GTSVLAIKAFREMGSEKVWDKSRIVIPFDHIVPANNETAATLQAEVRRWARA 56
Query: 157 QNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATG 216
Q I+ FYD G+CH + G PG +++G DSH+CT GA G F TG
Sbjct: 57 QGIENFYDCG-----------HGICHQVFCEMGFALPGALVVGADSHSCTYGALGAFGTG 105
Query: 217 IGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEF 276
+G TD + G++ +VP T+ L+G + D + AKDL L ++ E+ GA Y S+EF
Sbjct: 106 VGATDMAEIYSRGRLWFRVPETICMRLEGTLGDMVSAKDLALFVVKEMGADGANYMSVEF 165
Query: 277 VGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFL 336
VG VERLS+ RMTLCNM VE G K +VP D + YL + PY ++SD S+
Sbjct: 166 VGGAVERLSISGRMTLCNMGVEMGAKAAIVPPDESVDAYLARRARRPYTHIHSD-PGSYY 224
Query: 337 SEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLAS 396
E +D+S + P++A P+ DN R+ +++D+V+IG+CT G+ ED AA++
Sbjct: 225 REIEYDVSDIPPMIAAPYRVDNVHPVRDLAGIEVDQVFIGTCTNGRLEDLEMAARIV--K 282
Query: 397 GKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
GK+VK+ T ++PA++++++ G+ + EAG P CG CLG
Sbjct: 283 GKRVKIRTLVIPASREIYL--------GALRSGVIETLVEAGA-MIGPPGCGPCLG 329
>gi|289432339|ref|YP_003462212.1| homoaconitate hydratase [Dehalococcoides sp. GT]
gi|288946059|gb|ADC73756.1| homoaconitate hydratase family protein [Dehalococcoides sp. GT]
Length = 422
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 203/386 (52%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
TL EKI S S S GD V VD+ D GP + +EF +N K+ + +
Sbjct: 9 TLAEKILSLKS-GSDASAGDIVVSMVDLAFVQDTTGP----LTVREFWDNGFTKLANPLR 63
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH + + + + +LR F + F D+G +GVCH L
Sbjct: 64 TALFLDHAAPSPQRQLSTDHILLRKFARDTGALIF----DVG--------EGVCH-QLVA 110
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E RPG+V++G DSHT TAG FATG+G++D GK +VP T++ V+ G
Sbjct: 111 EKLARPGDVIVGADSHTVTAGGLCAFATGMGSSDIAVAFALGKTWFRVPETIKVVVSGRF 170
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
L AKDLIL +IG I GATYK++EF G V +++ ER+T+ NM VEAG K G+ P
Sbjct: 171 KHGLYAKDLILHLIGLIGADGATYKALEFSGNVVNNMTVVERLTIANMAVEAGAKVGLFP 230
Query: 308 ADGTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
+D T +YL Y+P+ +D A + D + LEP ++KPH+ DN A ARE K
Sbjct: 231 SDRQTLEYLCSVGREADYQPLAADVDAVYERVIEIDATALEPTISKPHTVDNTATARELK 290
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V+IG+CTGG+ +D AA +F + + + PA+QK++++ L
Sbjct: 291 GTKLDQVFIGTCTGGRLDDLAVAAAIFKNRKRHPQTRLIVTPASQKIYLEAIRLGY---- 346
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I +AG + P CGACLG
Sbjct: 347 ----IEILVQAGANI-MPPGCGACLG 367
>gi|355670914|ref|ZP_09057561.1| hypothetical protein HMPREF9469_00598 [Clostridium citroniae
WAL-17108]
gi|354815830|gb|EHF00420.1| hypothetical protein HMPREF9469_00598 [Clostridium citroniae
WAL-17108]
Length = 418
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 207/387 (53%), Gaps = 31/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + Q+ PGD V VNVD +M HD+ P F K E K+WD +++V
Sbjct: 4 TIIEKIIKHNTGMDQVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDRVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S R+ + F + +K + G+CH + + G
Sbjct: 62 LIYDHLVPASQLDDTRHFRVGDAFAAKHGMKNVHR------------SDGICHQLMTEAG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+V+ GTDSHT T G G F++GIG T+ +LGTG + +KVP T+R V+DG +P+
Sbjct: 110 YVKPGDVVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIRVVIDGTLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+TVE +++ RMT+ NM +EAG K + D
Sbjct: 170 GVMSKDIILRLIGDLGADGATYRALEFSGSTVESMTVASRMTMANMAIEAGAKCALFTPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y K + + D+ A + + + EP++A P D RE K
Sbjct: 230 EKTEAYCGIKLDEYQKSLTGDDDAVYKRTIVYKAQEFEPVMACPSQVDKIRPVRELKGTP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED +AAA+V G+KV V + PA+++++ +
Sbjct: 290 IDQVFIGSCTNGRLEDLVAAAQVL--KGRKVADYVKLIVTPASRRIYQEAI--------- 338
Query: 428 KTCSQI--FEEAGCDTPASPSCGACLG 452
C I EAG P CG C G
Sbjct: 339 -ACGAIETLAEAGA-IITHPGCGLCCG 363
>gi|167748769|ref|ZP_02420896.1| hypothetical protein ANACAC_03543 [Anaerostipes caccae DSM 14662]
gi|167651739|gb|EDR95868.1| homoaconitate hydratase family protein [Anaerostipes caccae DSM
14662]
Length = 413
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RA+ P++ G+ V +D LM++D + ++ + ++ K+ D++K
Sbjct: 2 GMTIGEKIIARAARVPEVKAGEIHTVELDRLMSNDGTTHLTIDMYHNDL-KHPKIADKDK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH I + + +R+F E +I ++ + KGVCH + +
Sbjct: 61 LVFIIDHNIPAENPKTAEAHRKMRNFAREHDIAFY-------------EGKGVCHQIMVE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+ C PGE+++G DSHTCT GA G F TGIG TD + + TG + VP T+RF L G++
Sbjct: 108 DYVC-PGELIMGADSHTCTYGALGAFGTGIGCTDFLYGMVTGTSWVMVPETIRFELTGKL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + A+DLIL IIG + G YK MEF G LS+ ER+ LCN+ VEAG K G+V
Sbjct: 167 REGVYARDLILSIIGMVGANGCNYKIMEFAGEGAHNLSINERLVLCNLAVEAGAKTGIVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +Y+E + SDE A F Y ++ ++EP+VA+PH D+ E D
Sbjct: 227 PDEKVVEYVESRGRKAENLFVSDEDARFEKVYHINLDEIEPVVARPHLIDDVVPVEEAGD 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID ++GSC G+ ++ AA++ GKKV V + PA+ +V++
Sbjct: 287 VKIDEAFLGSCNNGRIDELRLAAEIL--KGKKVHEGVRFLIAPASNEVYVQALD------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF EAG S +C C G
Sbjct: 339 --EGLIDIFVEAGAMVMNS-NCSVCWG 362
>gi|187477452|ref|YP_785476.1| 3-isopropylmalate dehydratase large subunit [Bordetella avium 197N]
gi|115422038|emb|CAJ48561.1| 3-isopropylmalate dehydratase large subunit [Bordetella avium 197N]
Length = 422
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 208/391 (53%), Gaps = 37/391 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
+L +K+ + A + ++ G+ V VD+ M HD GP +E G AK+WD K+V
Sbjct: 6 SLAQKLIAAACGRSSVAEGEIVTCAVDLAMFHDSSGPRRLQPMLEELG--AKLWDPSKVV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ SD+ + R V I RD+ EQ + YD G+CH+ + Q G
Sbjct: 64 LVIDHYVPESDDESRRIVRIARDWAAEQRLPNVYD------------SLGICHVVVPQHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V TG++ +KVP TL +G + +
Sbjct: 112 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVTGQIWVKVPQTLMMRWNGRLAE 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L++IG + G Y+++EF G V LSM+ERMTL NM E G + G++ D
Sbjct: 172 GVTAKDMMLRMIGRYGMNGGRYQAVEFCGEAVRALSMQERMTLSNMSAELGSQVGLIAPD 231
Query: 310 GTTFKYLEDK---TSLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDNRALAREC 365
TT YL + L SDE S +E++ FD + L P VA PHSP N +
Sbjct: 232 ETTAAYLREAGVTEELDLARWCSDEGVS--AEWQDFDAAALAPQVAAPHSPANARDVDQY 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWMDVYTLP 421
DV + YIG+CTG K ED AAA V LA+G ++ V PA+Q+ D
Sbjct: 290 ADVPLQVAYIGACTGAKLEDLRAAASVLRGRRLAAGMRLMV----APASQQ---DQRQAE 342
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G Q EAG D A+ SCGAC G
Sbjct: 343 AEG-----VMQALREAGADVLAT-SCGACAG 367
>gi|317498854|ref|ZP_07957139.1| homoaconitate hydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893850|gb|EFV16047.1| homoaconitate hydratase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 416
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 206/386 (53%), Gaps = 28/386 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI +RA++ Q+ G+ + VD LM++D + ++ + ++ K+ D++K+
Sbjct: 3 MTIGEKIIARAAKVDQVKAGEIHTIEVDRLMSNDGTTHLTIDMYHNQL-KHPKIADKDKL 61
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V I DH + + + +R+F E IK + + KGVCH + E
Sbjct: 62 VFIMDHNVPAENPKTAAAHRKMRNFAKEHEIKLY-------------EGKGVCH-QIMVE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
H PGE ++G DSHTCT GA G F TGIG TD + + TG+ + VP T+RF L G++
Sbjct: 108 NHVCPGEFIMGADSHTCTYGALGAFGTGIGCTDFLYAMVTGQSWVLVPDTIRFNLHGKLR 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + A+DL+L IIG + G YK MEF G L ++ER+ LCN+ VEAG K G+V
Sbjct: 168 EGVYARDLMLSIIGMVGANGCNYKIMEFAGEGAHNLDIDERLVLCNLAVEAGAKTGIVEP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +Y+E + SD+ A F Y ++ +++P+VA+PH D+ A+E DV
Sbjct: 228 DEKVVEYVESRGRKAENLFKSDDDAVFEKVYDINLDEIKPVVARPHQIDDVVDAKEVNDV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KID ++GSC G+ E+ AA++ GKKV V + PA+ +V+M
Sbjct: 288 KIDEAFLGSCNNGRIEELRVAAEIL--KGKKVSDSVRFLIAPASNEVYMQALD------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G + +C C G
Sbjct: 339 -EGLIDIFMESGA-MVMNCNCSVCWG 362
>gi|73538668|ref|YP_299035.1| 3-isopropylmalate dehydratase large subunit [Ralstonia eutropha
JMP134]
gi|72122005|gb|AAZ64191.1| 3-isopropylmalate dehydratase, large subunit [Ralstonia eutropha
JMP134]
Length = 435
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 195/344 (56%), Gaps = 20/344 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RAS + ++PG+ V VD+ M HD GP ++ G A+VWD ++V
Sbjct: 16 TLAQKLLARASGRAHVTPGEIVTCRVDLAMMHDSGGPRRVKPLLEKIG--ARVWDPSRVV 73
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ D + + V I R++ E+ + F+D++ G+CH+ + Q+G
Sbjct: 74 VVTDHYVPAHDADSRKIVQIAREWVREEGVARFHDME------------GICHVVVPQKG 121
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ RPG + +G DSH+ T GAFG + GIG T+ VL TG++ ++VP TLR G +
Sbjct: 122 YLRPGMMAVGGDSHSSTGGAFGTYMFGIGATEMLGVLVTGEIWVRVPQTLRMQWHGRLRP 181
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L++ + + G Y+++E+ GT V LSM+ERMTL NM E G + G+V D
Sbjct: 182 GVSAKDMMLRMCTQFGMDGGQYQAVEYAGTAVSALSMQERMTLSNMTAELGAQVGLVAPD 241
Query: 310 GTTFKYLEDKTSLPYE----PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
T +L D P E SD A+ L+ + FD + L P V++PH+P + +
Sbjct: 242 AVTRDWLLDAGVEPSEIDVDRWQSDAGAACLATHDFDAASLAPQVSRPHTPADASDVDSL 301
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
+V ++ YIG+CTG K +D AA+V G++V + L+ A
Sbjct: 302 GNVAVNIAYIGACTGAKLDDLRMAAQVL--RGQRVARNSRLLVA 343
>gi|291519677|emb|CBK74898.1| 3-isopropylmalate dehydratase, large subunit [Butyrivibrio
fibrisolvens 16/4]
Length = 415
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 197/385 (51%), Gaps = 25/385 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI + A+ K GD V +D LM++D G I +N + D K
Sbjct: 2 GMTMAEKIIACAAGKESCRAGDIETVTLDRLMSND--GTTHLTIDMYNNLKNPHIKDVNK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH I + + + +RDF E I ++ + +GVCH +
Sbjct: 60 LVWIIDHNIPSDSPKTAASHKKMRDFAREHGITFY-------------EGEGVCHQVM-M 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E H RPGE++ G DSHTC GA G F TG+G TD + + TG L VP T+RF L G +
Sbjct: 106 ENHVRPGELIFGADSHTCAYGALGAFGTGVGCTDYLYAMVTGTSWLLVPETIRFNLIGNL 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ A+D+IL IIG+IS GA YK+MEF G ++ LS+ +R+ +CN+ VEAG K ++
Sbjct: 166 KPGVYARDVILTIIGKISANGANYKAMEFAGDGLKNLSVADRIAICNLCVEAGAKTALME 225
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D YL++ P SD+ A F + D+ ++EP+VAKPH DN +EC+
Sbjct: 226 VDDVAMAYLKEHGREPKALFKSDDDAVFSQVFDIDLGEIEPIVAKPHFVDNVVPVKECEG 285
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
KID ++GSC G+ ED A V KV +VPA+++V+
Sbjct: 286 TKIDEAFLGSCNNGRIEDLRVGAAVIKGKHVAEKVRFLVVPASREVYQQALK-------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ IF +AG +P+C C G
Sbjct: 338 EGLLDIFMDAGA-MVMNPNCSVCWG 361
>gi|78358259|ref|YP_389708.1| 3-isopropylmalate dehydratase large subunit [Desulfovibrio
alaskensis G20]
gi|123551504|sp|Q30WD3.1|LEUC_DESDG RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|78220664|gb|ABB40013.1| homoaconitate hydratase family protein [Desulfovibrio alaskensis
G20]
Length = 418
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 209/403 (51%), Gaps = 28/403 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI + +++ G V V + + +D+ P + F+ KV+D+++
Sbjct: 2 AHTLAQKILQKHTDQQVGEAGQIVRCRVSMALANDITAPLAIKSFRAMGA--GKVFDKDR 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH+ D + V R+F + I ++Y+ + GV H L +
Sbjct: 60 VALVMDHFTPQKDIDSAIQVKNTREFAAQMGITHYYEGGE----------AGVEHALLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG++++G DSHTCT G G FATG+G+TD + G+ KVPP++R G M
Sbjct: 110 LGLVGPGDIVVGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPSIRVSYRGTM 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P ++ AKDL+LQ+IG I V GA YK++EF G V+ +S+E RMT+ NM +EAGGK G+ P
Sbjct: 170 PAHVGAKDLVLQLIGHIGVDGALYKALEFDGPVVDAMSVEGRMTIANMAIEAGGKCGLFP 229
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
+D T Y + E + +D+ A + FD+S L P +A PH P+N E +
Sbjct: 230 SDDLTLAYTAAR-GRNDEKLSADQDAVYERSLSFDVSDLAPQIACPHLPENVRPVTEVQG 288
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V+I + IGSCT G+ D AA V G+KV V ++PAT +W
Sbjct: 289 VQIHQAVIGSCTNGRISDLREAAAVL--RGRKVHKSVRCIVLPATPGIWKQALR------ 340
Query: 426 GGKTCSQIFEEAGCDT-PASPSCGACLGGPKDTYARMNEPMAS 467
+ + F +AGC PA +CG CLGG A +A+
Sbjct: 341 --EGLIETFMDAGCIVGPA--TCGPCLGGHMGILADGERAIAT 379
>gi|358064130|ref|ZP_09150715.1| hypothetical protein HMPREF9473_02778 [Clostridium hathewayi
WAL-18680]
gi|356697646|gb|EHI59221.1| hypothetical protein HMPREF9473_02778 [Clostridium hathewayi
WAL-18680]
Length = 415
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 23/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EKI R + K ++ PGD V VNVD +M HD+ P F K E ++WD +K+V
Sbjct: 4 TAIEKIIRRNTGKTEVKPGDIVTVNVDRVMIHDIFIP--FVADKFEEMGFTRLWDADKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S R+ + F + + + + G+CH + + G
Sbjct: 62 LIYDHLVPASQVDDTRHFRVGDAFAEKYGLTHVHR------------SDGICHQLMTEAG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+V+ GTDSHT T G G F++GIG T+ +LGTG + ++VP T++ V+DG++PD
Sbjct: 110 YVKPGDVVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWVRVPETIKVVIDGKLPD 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
Y+++KD+IL++IG++ GATY+++EF G+ VE +S+ RMT+ NM VEAG K + D
Sbjct: 170 YVMSKDIILRLIGDLGADGATYRALEFSGSAVEAMSVSSRMTIANMAVEAGAKCALFTPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + + + DE A + + P++A P DN + +
Sbjct: 230 EKTAEYCQVELTEEMRDIKGDEDAVYCRTITYRAEDFVPVLACPSQVDNIKPVSQLEGTP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
ID+V+IGSCT G+ ED + AA + V + PA++K++++ L V +
Sbjct: 290 IDQVFIGSCTNGRLEDLVMAAGILKGKSVAPYVKLIVTPASRKIYLEAAKLGVIDT---- 345
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
AG P CG C G
Sbjct: 346 ----LIAAGA-IVTHPGCGLCCG 363
>gi|390562252|ref|ZP_10244486.1| 3-isopropylmalate dehydratase large subunit 1 [Nitrolancetus
hollandicus Lb]
gi|390173178|emb|CCF83787.1| 3-isopropylmalate dehydratase large subunit 1 [Nitrolancetus
hollandicus Lb]
Length = 418
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 198/383 (51%), Gaps = 23/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK +RAS + ++ G V D+ ++HD P S + +V E++
Sbjct: 4 TFAEKALARASGESEVVAGQIVDARPDVALSHDNTAPISRTFYSLGID---RVKYPERLA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + +N +R F +Q ++ F+++ +G+CH L++E
Sbjct: 61 ITLDHAVPAPSTLHAQNHAEVRQFVAKQGVRNFFEVG-----------RGICHQVLSEEA 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PGE++LG+DSHT G G F G+G ++ + TG++ L+VP ++ V+DGE+P
Sbjct: 110 IVLPGELILGSDSHTTHFGWLGAFGAGVGRSEMAAIWATGELWLRVPESILIVVDGELPP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL L+IIG++ G Y S+EF G+T+E LS + RM + NM+ E G KN + D
Sbjct: 170 GVTTKDLCLKIIGDLGADGGLYLSVEFTGSTLESLSFDSRMVIPNMMAEFGAKNAYLAPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
++L K S + P+Y D AS+L+ + FD S LEP+VA+PH+ DN E
Sbjct: 230 DRLIEWLRGKASRDFTPLYPDPDASYLAVHHFDASTLEPMVARPHTVDNVVPISEVAGTP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+ + ++G+CT G+ ED AAA+V V ++PA+ +V+MD +
Sbjct: 290 VQQAFLGTCTNGRLEDLAAAAEVLRGRHVAVGTRLLVIPASSRVYMDAMA--------QG 341
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
EAG +P CG C+G
Sbjct: 342 YLTTLMEAGA-VIGTPGCGPCMG 363
>gi|377808117|ref|YP_004979309.1| 3-isopropylmalate dehydratase large subunit [Burkholderia sp. YI23]
gi|357939314|gb|AET92871.1| 3-isopropylmalate dehydratase large subunit [Burkholderia sp. YI23]
Length = 425
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 201/393 (51%), Gaps = 34/393 (8%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TLT+K+ + A + ++ G+ V VD+ M HD GP G A +WD+ K
Sbjct: 4 AQTLTQKLLAAACGRDTVAVGEIVTCRVDLAMFHDSSGPRRLQPMLDTLG--ATLWDKSK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ D+ + R V I RD+ +Q + + YD G+CH+ L +
Sbjct: 62 VVLVLDHYVPAQDDESRRIVRIARDWAAQQALPHVYD------------SVGICHVVLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG +G DSH+ T GAFG + GIG+T+ V +G++ +KVP T+R +G +
Sbjct: 110 HGHLRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVSGEIWVKVPETIRMHWEGRL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
D + AKD++L +IG + G Y+++EF G V L M+ERMTL NM E G + G+V
Sbjct: 170 GDGVTAKDMMLHMIGRFGMNGGRYQAIEFCGDAVRALPMQERMTLSNMSAELGSQVGLVA 229
Query: 308 ADGTTFKYLEDKTSLPYE------PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
D T YL L E + + + +RFD L P +A PHSP N
Sbjct: 230 PDAVTLDYLR-SVGLTRELDDIDVTRWQSDAGAAAEVHRFDAGALAPQIAAPHSPANTKP 288
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYT 419
+ + V +D Y+G+CTG K ED AAA+V G++V + + PA+ + D
Sbjct: 289 VQAFEGVAVDVAYLGACTGAKLEDLRAAARVL--KGRRVADGLRFMVAPASAR---DEAQ 343
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G + +AG A+ SCGAC G
Sbjct: 344 ATREG-----VMDVLRDAGAQVLAN-SCGACAG 370
>gi|448331565|ref|ZP_21520828.1| 3-isopropylmalate dehydratase [Natrinema versiforme JCM 10478]
gi|445609131|gb|ELY62940.1| 3-isopropylmalate dehydratase [Natrinema versiforme JCM 10478]
Length = 439
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 209/378 (55%), Gaps = 27/378 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKI S S + GD V VD ++THDV GP + +F+ G++A + E +V
Sbjct: 5 TITEKILSEKS-GADATAGDYVEATVDAMVTHDVTGPLTIDVFEDVTGDDAALAAPENVV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N +I+R+F E Y+I D G+CH + +EG
Sbjct: 64 FTLDHHAPADGVQAANNHNIVREFAAEYGANQ-YEISD-----------GICHQVMIEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G TG+G+TD G TG++ +VP T+RF ++G++PD
Sbjct: 112 FVEPGDLVIGADSHSTTYGGLGALGTGVGSTDLGTAFATGELWFRVPETIRFEVEGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ GATYK+ E+ G+ + L + +R+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILRFIGDVGFDGATYKTAEYGGSAIRDLPIHQRLVLSNMAIEMGGKAGIVEPD 231
Query: 310 GTTFKYLEDKTSLPY---EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE++ L + +D+ AS+ + Y ++ + L P V+KP +P+N E
Sbjct: 232 ERTATYLEEQAGLEVGVDPDLAADDDASYEAVYTYEGADLAPQVSKPSNPENAVDVGETT 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL--VPATQKVW---MDVYTLP 421
ID+V++G+CT G+ ED A V +G++V T L VPA++ V+ ++ L
Sbjct: 292 GTDIDQVFVGTCTNGRYEDIRVVADVL--TGERVAPNTRLIVVPASRAVYQRCLETGVLE 349
Query: 422 VPGSGGKTCSQIFEEAGC 439
G T F+ AGC
Sbjct: 350 ALVDAGAT----FQSAGC 363
>gi|255658151|ref|ZP_05403560.1| homoaconitate hydratase [Mitsuokella multacida DSM 20544]
gi|260849458|gb|EEX69465.1| homoaconitate hydratase [Mitsuokella multacida DSM 20544]
Length = 423
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 196/384 (51%), Gaps = 23/384 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI + + K + G+ V VD +D+ + F + GE +V D E +
Sbjct: 1 MHAIEKILAAKAGKSSVHAGEIVNCRVDWAGINDLYYQ-TVKSFYEMGGE--RVVDPEHV 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+ DHY + E+ N R F EQ I++ DI + GVCH +A
Sbjct: 58 VLFFDHYAPCATEKQADNHKRFRAFAREQGIRHLMDINE-----------GVCHQVMADH 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++ TDSHT T GAFG F TG+G TD +L TG++ KVP +R L G++P
Sbjct: 107 GFSAPGEVIVITDSHTTTHGAFGAFGTGVGATDLAVILATGRLWFKVPEVIRINLTGKIP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD++L IIG++ A YK++EF G +++LS+ ERM LCNM E G K +
Sbjct: 167 AGVYAKDIVLSIIGKLKADYAVYKAVEFAGPALQQLSISERMALCNMTTEMGAKTSYIQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T ++L+++ + +D + ++ FD+S++EP +A P S DN +
Sbjct: 227 DAITLQFLKERGRQDFTVYETDADYVYAADLTFDVSEVEPQLAAPFSVDNVQALSAYAGM 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+ Y+GSCTGG+TEDF AAK+ +VPA++ V + K
Sbjct: 287 HVDQAYLGSCTGGRTEDFAVAAKILAGQHIPAGTRMVMVPASKAVLAECLA--------K 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
Q AG AS C ACLG
Sbjct: 339 GYIQTLLAAGATLTAS-GCAACLG 361
>gi|366164763|ref|ZP_09464518.1| 3-isopropylmalate dehydratase large subunit [Acetivibrio
cellulolyticus CD2]
Length = 431
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 207/396 (52%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIF+ + + + D + +D + H++ P I + +V+D KI
Sbjct: 4 TLAEKIFN--AHRVNMPFEDTHVLKLDAVFCHEITTP--IAITDLQARGMDRVFDPNKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ + IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKKHGIKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL+G++
Sbjct: 110 FVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKIVLNGKLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +I E++V GAT MEF G+ V+ +SME RMTLCNM +EAGG GV D
Sbjct: 170 GVFAKDVILFVIKELTVNGATNMVMEFTGSIVDEMSMEARMTLCNMAIEAGGTCGVCYPD 229
Query: 310 GTTFKYLED---------KTSL-PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D + +L Y SDE A++ Y FD+S LEP+V PD
Sbjct: 230 MTTVEYLCDYIKDEFESKEAALKEYSKWISDEGATYEKVYEFDLSNLEPMVTFGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
RE KI+++YIGSCT G+ ED AA+ L GKK+ +V + PAT ++
Sbjct: 290 KTVREMTGTKINQIYIGSCTNGRIEDLRVAAQ--LLKGKKISDEVRGIVSPATPAIYSQA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF++AG C T +P+CGACLG
Sbjct: 348 LKEGI--------IEIFQDAGFCVT--NPTCGACLG 373
>gi|410667259|ref|YP_006919630.1| 3-isopropylmalate dehydratase large subunit [Thermacetogenium
phaeum DSM 12270]
gi|409105006|gb|AFV11131.1| 3-isopropylmalate dehydratase large subunit 1 [Thermacetogenium
phaeum DSM 12270]
Length = 418
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 201/383 (52%), Gaps = 24/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SR S + + D V +VD M D P + F+K GE+ V+D E++
Sbjct: 4 TIAEKILSRKSGRDAYA-NDIVVADVDFRMGQDGTAPLAIRSFEKMNGES--VFDPERVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + E + ++R F E+ I YD+ + GVCH L ++G
Sbjct: 61 FVIDHSAPSPLEGVSALHSLMRRFAKEKGIT-LYDVGE-----------GVCHQLLPEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++G DSHTCT GA FATG+G+TD L +GK+ KVP T++F+ G +P
Sbjct: 109 HVGPGSLVIGADSHTCTYGALNAFATGVGSTDLAAALISGKMWFKVPETIKFICHGRLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL +I +++ GATY + E+ G + LS+E R T+ NM +E G K G++ AD
Sbjct: 169 GVYSKDLILYLISQVTADGATYMAAEYTGEAICALSVEGRFTISNMAIEMGAKVGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
++++ S +E V D AS+ + +D+S LEP VAKPH DN E K
Sbjct: 229 DKVWEWVRSHGSGEFEAVSPDPDASYAAVKEYDVSNLEPYVAKPHRVDNGVPVGEVKGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + +G+CT G+ ED AA++ V + PA++KV+++ V
Sbjct: 289 IQQAVLGTCTNGRLEDLAVAARILHQRRVHPGVRLIVAPASRKVYLEAMETGV------- 341
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
Q AG +P CG C+G
Sbjct: 342 -LQTLVRAGAAV-VTPGCGPCVG 362
>gi|239626908|ref|ZP_04669939.1| 3-isopropylmalate dehydratase large subunit 1 [Clostridiales
bacterium 1_7_47_FAA]
gi|239517054|gb|EEQ56920.1| 3-isopropylmalate dehydratase large subunit 1 [Clostridiales
bacterium 1_7_47FAA]
Length = 418
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 206/387 (53%), Gaps = 31/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + Q+ PGD V VNVD +M HD+ P F K E K+WD +++V
Sbjct: 4 TIIEKIIKHNTGAAQVRPGDIVTVNVDRVMIHDIFIP--FVADKFEEMGFKKLWDPDRVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S R+ + F +K+ + G+CH + + G
Sbjct: 62 LIYDHLVPASQLDDTRHFRVGDAFAARYGMKHVHR------------SDGICHQLMTEAG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+V+ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DG++P+
Sbjct: 110 YVKPGDVVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIDGKLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF GTTVE +S+ RMT+ NM +EAG K + D
Sbjct: 170 GVMSKDIILRLIGDLGADGATYRALEFSGTTVEEMSIASRMTIANMAIEAGAKCALFTPD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E K + + D A ++ + P++A P D E
Sbjct: 230 AKTEEYCEVKLDDYQKSLTGDADAVYMKTMVYRAEDFVPVMACPSQVDKIKPVSELMGTP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED +AAA+V G++V V + PA++KV+ +
Sbjct: 290 IDQVFIGSCTNGRLEDLVAAAEVL--KGRQVADYVKLIVTPASRKVYNEAI--------- 338
Query: 428 KTCSQI--FEEAGCDTPASPSCGACLG 452
C I EAG P CG C G
Sbjct: 339 -ACGAIDTLAEAGA-IITHPGCGLCCG 363
>gi|148265729|ref|YP_001232435.1| 3-isopropylmalate dehydratase large subunit [Geobacter
uraniireducens Rf4]
gi|189046476|sp|A5G7U4.1|LEUC_GEOUR RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|146399229|gb|ABQ27862.1| homoaconitate hydratase family protein [Geobacter uraniireducens
Rf4]
Length = 427
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 210/397 (52%), Gaps = 39/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKIF+ A + G V + +D++M H++ P + G++ +V+D +I
Sbjct: 3 MTIAEKIFA-AHLVDEPFHGTRV-LKLDVVMCHEITTPIAIADLIAR-GKD-RVFDTSRI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + +LRD+ NIK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKMLRDWARRHNIKDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R L+G++P
Sbjct: 109 GFIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKTIRINLNGKLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL +IG + V GAT + +EF G V+ ++ME RMTLCNM +EAGG +G+
Sbjct: 169 KGVYAKDAILHVIGRLGVNGATDRVIEFRGAVVDAMTMESRMTLCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL-----EDKTS-----LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL ED S + ++ +SDE A + DIS LEP+V + PD
Sbjct: 229 DSVTVDYLWPFISEDYASKEAALVEFKKWWSDEDAVYERVLDLDISGLEPVVTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMD 416
E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT KV+ D
Sbjct: 289 VKTITEMAGTPVDQVYLGSCTNGRLEDLRVAAEIL--KGKKIAPTVRAILSPATPKVYSD 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ IF EAG C T +P+CGACLG
Sbjct: 347 ALH--------EGLIDIFMEAGFCVT--NPTCGACLG 373
>gi|374997182|ref|YP_004972681.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus orientis
DSM 765]
gi|357215548|gb|AET70166.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus orientis
DSM 765]
Length = 416
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 27/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI + + + G V V +D +M++D S +FKKE + +V+DREK+
Sbjct: 1 MNAIEKIIATHAGLETVKAGQIVDVKLDCVMSNDATTTLSIDVFKKEL-KGERVFDREKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DHY A +R F +Q +KY YD GVCH L E
Sbjct: 60 VLVMDHYTPCCSVDAAETHKKMRQFGRDQELKYIYD------------GVGVCH-QLMLE 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
H +PG+ ++G DSHTCT GA G +TG+G+TD GKV +KVP ++ + G+ P
Sbjct: 107 HHAKPGDFIIGADSHTCTYGAIGALSTGMGSTDVAVGWLEGKVWIKVPLAIKIRVGGKWP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKDL+L++IG+++ GATYK++ F G + L++ +R+TLCNM +EAG K V
Sbjct: 167 QGVYAKDLVLKMIGDLTAKGATYKALVFEGEAIRDLTVSQRVTLCNMGIEAGAKFAYVQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D +++D Y + DE AS+ +++ LEP +A P+S D + + +
Sbjct: 227 DEKVKAFMKDLGREYYPVIEDDEDASYERVLTYNVENLEPQIAYPNSVDQVKSLSDFEGL 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
ID V++G+CT G+ ED AA + GKK+ KV + PA+ V+M+ + G+
Sbjct: 287 DIDEVFLGACTNGRLEDLETAAAIL--RGKKISEKVRMLVTPASNAVYMEAMERGLIGT- 343
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
F E+G ++P C AC GG
Sbjct: 344 -------FMESGA-MVSTPGCSACFGG 362
>gi|218132704|ref|ZP_03461508.1| hypothetical protein BACPEC_00565 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992430|gb|EEC58433.1| homoaconitate hydratase family protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 415
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 218/395 (55%), Gaps = 34/395 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI + + K + PG V VNVD +M HD+ P F E G KVWD +K+V
Sbjct: 8 TLIEKIVMKNTGKADVKPGAIVTVNVDRVMIHDIFIPFVVDKFH-EMGFK-KVWDADKVV 65
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + TS R+ I F EQ +K F+ +A+ G+CH + + G
Sbjct: 66 LIYDHLVPTSAVEDVRHFKIGDAFVKEQGLKNFH--------RAD----GICHQLMPEMG 113
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G+ G F++GIG T+ VLGTG++ +KVP T++ V++GE+P+
Sbjct: 114 YAKPGNIVFGTDSHTTTYGSVGCFSSGIGYTEMAAVLGTGEMWIKVPETIKVVINGELPE 173
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+++G++ GATYK++EF G+TV+ +++ RMT+ NM +EAG K + D
Sbjct: 174 GVYAKDIILRLLGDLRSDGATYKALEFSGSTVDNMTVASRMTIANMAIEAGAKAALFAPD 233
Query: 310 GTTFKYLEDKTSLPYEPVY---SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T ++ + + Y+ V +D A + +D S L P++A P DN E K
Sbjct: 234 EKTAEF----SGVNYDDVAWLKADADAEYCRVMEYDASTLVPVLACPSQVDNIHPVSELK 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDV----YTL 420
KID+V+IGSCT G+ ED AA + GKK+ + + PA++ ++ + Y
Sbjct: 290 GTKIDQVFIGSCTNGRLEDIKVAADIL--RGKKIADYMRLIVTPASRSIYEEASKAGYLK 347
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPK 455
+ +G I + GC +CG G K
Sbjct: 348 DLALAGA-----IITQPGCGLCCGRACGIMADGEK 377
>gi|448419108|ref|ZP_21580199.1| 3-isopropylmalate dehydratase [Halosarcina pallida JCM 14848]
gi|445675421|gb|ELZ27951.1| 3-isopropylmalate dehydratase [Halosarcina pallida JCM 14848]
Length = 437
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 207/386 (53%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T +EK+ S A + G V VD+ M HD+ GP +F F + GE+A ++ ++ V
Sbjct: 5 TFSEKLLS-AKAGEDVRAGAYVEAAVDVAMAHDITGPLAFETFYEVTGEDATLFAPDRTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH+ A N + LR F E F ++G+ G+CH L +EG
Sbjct: 64 LTIDHHAPADGVEAANNHNALRRFAAEHGAHQF----EVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G++D G L TG++ +VP T+RF ++G++PD
Sbjct: 112 FVGPGDLVVGADSHSTTYGGIGAFGTGVGSSDLGTALATGELWFRVPETIRFEVNGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL+L+ IG++ AG TY++ E+ G+ +E L + ER+ L NM +E GGK G V D
Sbjct: 172 GVYAKDLVLKFIGDVGFAGCTYETAEYAGSAIESLPIHERLVLANMAIEMGGKAGYVEPD 231
Query: 310 GTTFKYLEDKT--SLPYEP-VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T +YLE +T ++ +P + SD+ A++ + + + L P V+KP +P+N E +
Sbjct: 232 DRTAEYLERQTGRAVDIDPSLRSDDDATYDEVHTYRAADLAPQVSKPSNPENAVDVTEVE 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A V V +VPA+ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIKLVADVLEGEELAPNVRMVVVPASGSVYRHMLKTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +AG S CG C G
Sbjct: 348 ----FETLTDAGA-VIQSAGCGPCAG 368
>gi|294102686|ref|YP_003554544.1| 3-isopropylmalate dehydratase [Aminobacterium colombiense DSM
12261]
gi|293617666|gb|ADE57820.1| 3-isopropylmalate dehydratase [Aminobacterium colombiense DSM
12261]
Length = 425
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 206/391 (52%), Gaps = 28/391 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S + + GD VNVD+ M HD + F+ E+GE +WD ++V
Sbjct: 6 TIVEKIISSHCGQ-DVRAGDIAVVNVDLAMAHDSTASLAIQAFR-EYGE-PHIWDASRLV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + +E+A+R ++RDF EQN++ F ++G +GVCH L ++G
Sbjct: 63 FVLDHAVPCPNEQASRLHSLMRDFAKEQNVRLF----EVG--------EGVCHQLLVEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
P E++LG DSHTCT GA + GIG+TD V+ TG++ LKVP TL+ V G M
Sbjct: 111 LVVPSEIVLGCDSHTCTYGAMNALSFGIGSTDMSGVMLTGQLWLKVPETLKIVYSGAMGK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L IG + GA Y ++ F G T+ + + +RMT+CNM +E G K G++ D
Sbjct: 171 GVTAKDVMLYTIGRLGFDGADYLAISFTGKTIADMEICDRMTMCNMAIECGAKAGIMECD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL +T Y PV+ D A + + D++ + P VA PH+ DN +
Sbjct: 231 EKTSAYLTGRTHKSYTPVFDDADAVYHNVMEIDVNAIGPQVACPHAVDNVHPVEDVAGRA 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+ +V+IG+CT G+ ED AAA + + PA+++++++ +
Sbjct: 291 VQQVFIGTCTNGRLEDLRAAAAILRKGRVNPNCRLIIGPASRQIFLEAVK--------EG 342
Query: 430 CSQIFEEAGCDTPASPSCGAC----LGGPKD 456
+ F ++G T P CG C LG P D
Sbjct: 343 LVETFLKSGA-TLIPPGCGPCPGTHLGVPGD 372
>gi|323702809|ref|ZP_08114468.1| homoaconitate hydratase family protein [Desulfotomaculum
nigrificans DSM 574]
gi|323532197|gb|EGB22077.1| homoaconitate hydratase family protein [Desulfotomaculum
nigrificans DSM 574]
Length = 428
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 204/385 (52%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + D V VD +M D P + F+ G+ +++D +K+
Sbjct: 14 TIIEKILSAHSGQ-DCRANDIVVAQVDYIMGQDGTSPLAIRAFENMNGK--ELFDPDKVA 70
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + ++R+F ++ + YDI GVCH + + G
Sbjct: 71 LVIDHSAPSPLEGVSALHKLMREFAKQKGC-HLYDIG-----------AGVCHQLIPESG 118
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +GK+ KVP T++FV G +P
Sbjct: 119 QVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGGLISGKMWFKVPETVKFVCHGVLPP 178
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ G TY + E+ G + LSME R T+ NM +E G K G++ AD
Sbjct: 179 GVYAKDLILYLIGQVTADGCTYMAAEYTGEAIAALSMEGRFTVANMAIEMGAKAGLMEAD 238
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF++L+ T + PV SD A++ FD+SKLEP VAKPH DN A
Sbjct: 239 EKTFQWLKRYTDREFTPVSSDADANYHQVLEFDVSKLEPQVAKPHRVDNVAPISRVLGAP 298
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I + +IG+CT G+ ED AA + GKKV V + PA+++V++D
Sbjct: 299 IQQAFIGTCTNGRLEDLRLAASIL--EGKKVHPDVRFIVAPASRRVYLDAMA-------- 348
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG +P CG C+G
Sbjct: 349 EGVIQKLVEAGAAV-VTPGCGPCVG 372
>gi|333923908|ref|YP_004497488.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749469|gb|AEF94576.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 428
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 204/385 (52%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + D V VD +M D P + F+ G+ +++D +K+
Sbjct: 14 TIIEKILSAHSGQ-DCRANDIVVAQVDYIMGQDGTSPLAIRAFENMNGK--ELFDPDKVA 70
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + ++R+F ++ + YDI GVCH + + G
Sbjct: 71 LVIDHSAPSPLEGVSALHKLMREFAKQKGC-HLYDIG-----------AGVCHQLIPESG 118
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +GK+ KVP T++FV G +P
Sbjct: 119 QVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGGLISGKMWFKVPETVKFVCHGVLPP 178
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ G TY + E+ G + LSME R T+ NM +E G K G++ AD
Sbjct: 179 GVYAKDLILYLIGQVTADGCTYMAAEYTGEAIAALSMEGRFTVANMAIEMGAKAGLMEAD 238
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF++L+ T + PV SD A++ FD+SKLEP VAKPH DN A
Sbjct: 239 EKTFQWLKRYTDREFTPVSSDADANYHQVLEFDVSKLEPQVAKPHRVDNVAPISRVLGTP 298
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I + +IG+CT G+ ED AA + GKKV V + PA+++V++D
Sbjct: 299 IQQAFIGTCTNGRLEDLRLAASIL--EGKKVHPDVRFIVAPASRRVYLDAMA-------- 348
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG +P CG C+G
Sbjct: 349 EGVIQKLVEAGAAV-VTPGCGPCVG 372
>gi|260682611|ref|YP_003213896.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
CD196]
gi|260686211|ref|YP_003217344.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
R20291]
gi|260208774|emb|CBA61647.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
CD196]
gi|260212227|emb|CBE02934.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile
R20291]
Length = 364
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 185/331 (55%), Gaps = 28/331 (8%)
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D ++ R F + + F+D+ D+G + H+ L ++G
Sbjct: 1 MVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMG----------IEHVLLPEKG 50
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G+V++G DSHTCT GA G F+TG+G+TD G + TGK KVP ++FVL +
Sbjct: 51 IVTAGDVIIGADSHTCTYGALGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKPNK 110
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL IIGEI V GA YKSMEF G VE LSM++R T+CNM +EAG KNG+ P D
Sbjct: 111 WISGKDIILHIIGEIGVDGALYKSMEFCGDGVEYLSMDDRFTICNMAIEAGAKNGIFPVD 170
Query: 310 GTTFKYLED-KTSLPYEPVY---SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
T +Y+ K S + V +DE A + Y D+++L+ VA PH P+N E
Sbjct: 171 DKTMEYINSHKCSTITKDVNIYEADEDAVYDEVYEIDLAELKETVAFPHLPENTRTVDEI 230
Query: 366 -KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++
Sbjct: 231 DKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE--- 285
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
K F EAG ++P+CG CLGG
Sbjct: 286 -----KGYITTFIEAGA-AVSTPTCGPCLGG 310
>gi|374366948|ref|ZP_09625020.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus basilensis
OR16]
gi|373101505|gb|EHP42554.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus basilensis
OR16]
Length = 435
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 187/347 (53%), Gaps = 27/347 (7%)
Query: 63 GSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
G TL +K+ +RA+ ++PG V VD+ M+HD GP +E G AKV
Sbjct: 6 GPAHRPATLAQKLVARAAGLDTVTPGAIVTCRVDLAMSHDSSGPRRVAPLLRELG--AKV 63
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
WD E+ V++ DHY+ +D A V RD+ E + +F D +G+CH
Sbjct: 64 WDPERYVVVTDHYLPAADPEAEAIVRFTRDWVREARLPHFID------------GEGICH 111
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ L + GH PG ++G DSH+ T GAFG + GIG T+ VL TG++ L+VP T+R
Sbjct: 112 VVLPEHGHVLPGRFIVGGDSHSPTGGAFGAYMFGIGATEMAGVLATGEIWLRVPHTIRLQ 171
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
DG++ + AKD++L + G + + G Y+++E+ G V+ L M+ERMTL NM E G +
Sbjct: 172 WDGKLAAGVCAKDIMLFLCGRLGLDGGRYEAIEYTGEAVKALPMQERMTLTNMSAELGAQ 231
Query: 303 NGVVPADGTTFKYLE---------DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKP 353
G++ D TT +L D +L + ++ A+ L+ +RFD + L P VA P
Sbjct: 232 TGLIAPDATTLAWLAQAGVPAATLDAIALSHW--RTEPGAAVLASHRFDAAALAPQVAAP 289
Query: 354 HSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV 400
HSP N E ++D Y+G+CTG K ED AA V G++V
Sbjct: 290 HSPANTGPVDEAAGQRVDIAYLGACTGAKLEDLRMAASVL--RGRRV 334
>gi|407473688|ref|YP_006788088.1| 3-isopropylmalate dehydratase large subunit [Clostridium acidurici
9a]
gi|407050196|gb|AFS78241.1| 3-isopropylmalate dehydratase, large subunit LeuC [Clostridium
acidurici 9a]
Length = 428
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 206/396 (52%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIF + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TLAEKIFD--AHRVDMPFPDTHVLKLDRVFCHEITTPIAITDLMSRGMD--RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ +IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWARRHDIKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL+G++
Sbjct: 110 FVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHAPKTIKIVLNGKLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL II E++V GAT K +EF G+ V+ +SME RMTLCNM +EAGG +GV D
Sbjct: 170 GVYAKDVILFIIRELTVNGATNKVIEFTGSVVDEMSMESRMTLCNMAIEAGGTSGVCYPD 229
Query: 310 GTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D + Y SDE A++ Y +D++ LEP+V PD
Sbjct: 230 MTTVEYLWDFIKDEFSSKEEAVKEYSKWISDEDATYDKVYEYDVTTLEPMVTFGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDV 417
E KID++YIGSCT G+ ED AA + GKK+ V + PAT +
Sbjct: 290 KSVNEMTGTKIDQIYIGSCTNGRIEDLRIAASIL--KGKKISDDVRAIVSPATPA----I 343
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
Y++ + + +IF+EAG C T +P+CGACLG
Sbjct: 344 YSMALK----EGLIEIFQEAGFCIT--NPTCGACLG 373
>gi|291545692|emb|CBL18800.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus sp.
SR1/5]
Length = 414
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 206/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + K + PGD V VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TIIEKIIRHNTGKA-VKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFQKLWDPDKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S + R+ + F + +K + G+CH + + G
Sbjct: 61 LIYDHLVPASQQDDTRHFHVGDAFAAKYGMKNVHR------------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DGE+P+
Sbjct: 109 YVKPGNIVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIDGELPE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+T+E +S+ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDIILRLIGDLRADGATYRALEFSGSTIENMSVASRMTMANMAIEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y + + + DE A ++ + P++A P D E +
Sbjct: 229 EKTAAYCNVELDDYQKSLVGDEDAVYMKTITYKAEDFVPVMACPSQVDKIRDVSELQGET 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED +AAA+V GKKV V + PA++K++ L + +
Sbjct: 289 IDQVFIGSCTNGRLEDLMAAAEVL--KGKKVADFVKLIVTPASRKIYCQAIELGILDT-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG P CG C G
Sbjct: 345 ------LAEAGA-IITHPGCGLCCG 362
>gi|253581259|ref|ZP_04858515.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847460|gb|EES75434.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 416
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 197/370 (53%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D LM++D + ++ + +N + D K+V I DH + + +
Sbjct: 19 VKPGDIHTVKLDRLMSNDGTTHLTVDMYNNKL-KNPHIADTSKLVFIVDHNVPSDSPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E NI ++ + KGVCH + E + RPGE++ G DSHT
Sbjct: 78 ASQKKMRDFAKEHNIDFW-------------EGKGVCHQVMI-ENYVRPGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG + VP +++F L G++P+ + A+DLIL IIGEI
Sbjct: 124 CSYGALGAFGTGVGCTDFLYGMVTGTSWVLVPESVKFNLTGKLPEGVYARDLILTIIGEI 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y++MEF G + LS+ +RM LCNM VEAG K G+ AD +YL++ P
Sbjct: 184 GANGCNYQAMEFTGEGAKTLSISDRMALCNMAVEAGAKTGIFEADEKAIEYLKEHGREPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A + EY FD+SK+ P+VAKP DN A E ++I+ ++GSC G+ E
Sbjct: 244 AVYHSDPDAVYAREYTFDLSKVRPVVAKPDFVDNVVPAEEACGIEINEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A++ GKKV V +VPA+Q ++ + F EAG
Sbjct: 304 DLRVGAEII--KGKKVAEGVRFLVVPASQTIYRQALK--------EGLIDTFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|311105875|ref|YP_003978728.1| 3-isopropylmalate dehydratase large subunit [Achromobacter
xylosoxidans A8]
gi|310760564|gb|ADP16013.1| 3-isopropylmalate dehydratase large subunit 2 [Achromobacter
xylosoxidans A8]
Length = 422
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 200/388 (51%), Gaps = 31/388 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ + A + ++ G+ V VD+ M HD GP +E G A +WD +IV
Sbjct: 6 TLAQKLIAAACGRASVAEGEIVTCAVDLAMFHDSSGPRRLQPMLQELG--ATLWDPSRIV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ SD+ + R V I RD+ EQ + YD G+CH+ + Q G
Sbjct: 64 LVIDHYVPESDDESRRIVRIARDWAAEQRLPNVYD------------SLGICHVVVPQHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V TG++ +KVP TL +G++
Sbjct: 112 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVTGQIWVKVPQTLMMRWNGQLSQ 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L++IG + G Y+++EF G V LSM+ERMTL NM E G + G++ D
Sbjct: 172 GVTAKDMMLRMIGRYGMNGGRYQAVEFCGEAVRALSMQERMTLSNMSAELGSQVGLIAPD 231
Query: 310 GTTFKYLE-----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
TT YL D+ L + ++ + + FD + L P VA PHSP N +
Sbjct: 232 ETTVAYLREAGVTDEIDLAR---WRSDQGAQAEWHDFDAAALAPQVAAPHSPANARDVGQ 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
DV + YIG+CTG K ED AAA V + + PA+Q+ D G
Sbjct: 289 YGDVPVQVAYIGACTGAKLEDLRAAASVLRGRSLAAGMSLMVAPASQQ---DQRQAEQEG 345
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
Q+ +AG A+ SCGAC G
Sbjct: 346 -----VMQVLRDAGAQVLAT-SCGACAG 367
>gi|317498852|ref|ZP_07957137.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893848|gb|EFV16045.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 413
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 212/386 (54%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SR + PG VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TMIEKIISRNVGVDSVKPGQIQTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S +D +R F + Y +K++ G+CH + + G
Sbjct: 62 LIYDHMVPAS------TIDDIRHFKIGDAFAKKYGMKNVHR------SDGICHQLMTECG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG++ ++VP T++ V+DG++P+
Sbjct: 110 YAKPGNIVFGTDSHTTTYGCVGCFSSGIGYTEMAAILGTGEMWVRVPETIKVVIDGKLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL++IG+++ AGATYK++EF G+TV+ +S+ RMT+ NM +EAG K + D
Sbjct: 170 NVSSKDIILRLIGDLTAAGATYKALEFSGSTVDEMSVAARMTMSNMAIEAGAKAALFAPD 229
Query: 310 GTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +Y K L + +Y DE A + + L P+VA P D +E +
Sbjct: 230 EKTAEY--SKVDLADVDWLYGDEDAEYCQTITYKAEDLVPVVACPSQVDKIRAVKEVEGT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V+IGSCT G+ ED AAA++ GKKV V + PA++K +Y V
Sbjct: 288 ELDQVFIGSCTNGRLEDLKAAAEIL--KGKKVADYVKLIVTPASRK----IYKQAVDAGY 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K I EAG P CG C G
Sbjct: 342 MK----ILAEAGA-IITHPGCGLCCG 362
>gi|298243281|ref|ZP_06967088.1| 3-isopropylmalate dehydratase [Ktedonobacter racemifer DSM 44963]
gi|297556335|gb|EFH90199.1| 3-isopropylmalate dehydratase [Ktedonobacter racemifer DSM 44963]
Length = 417
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 203/384 (52%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG-ENAKVWDREKI 128
TL E+IFS +P + G+ V V VD +M+HD P + F+K G + +V++ E+
Sbjct: 3 TLAEEIFSYKLGRP-VEQGETVVVEVDHVMSHDTTSPLAIQAFRKLAGVSSGRVFNAERA 61
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH I S A +R F EQ+I + G+CH + ++
Sbjct: 62 HVVFDHIIPASTVAAATLQRDVRSFAREQDITILQE--------------GICHQVMPEK 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +++G DSHTCT GA G F TG+G+TD G TG+ +VP T+ L GE+
Sbjct: 108 GFVVPGAIIVGADSHTCTYGALGAFGTGMGSTDIGVAYATGRSWFRVPSTINVRLVGELQ 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+ L+++ ++ V GA Y+++E+ G VER+S+ ER T CNM +E GGK G+V
Sbjct: 168 PGVYAKDVTLEMVRQVGVDGANYRAIEYTGDLVERMSISERFTFCNMAIEMGGKAGLVAP 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TT ++L +T Y P+ + + + D S+LEP +A P +N + + V
Sbjct: 228 DETTREWLRGRTDQEY-PMLAPHNPRYERVFEIDASRLEPQIACPPDVNNVVPVGQVEHV 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID+V++G+CT G+ +D AA + + ++PA+++V+ + L
Sbjct: 287 KIDQVFLGTCTNGRLDDLAIAASILQGRTVHPETRMVVIPASREVYREALRL-------- 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
F +AG +P CG C+G
Sbjct: 339 GYIDTFVQAGASV-GTPGCGPCIG 361
>gi|225386508|ref|ZP_03756272.1| hypothetical protein CLOSTASPAR_00255, partial [Clostridium
asparagiforme DSM 15981]
gi|225047427|gb|EEG57673.1| hypothetical protein CLOSTASPAR_00255 [Clostridium asparagiforme
DSM 15981]
Length = 279
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 167/289 (57%), Gaps = 14/289 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI +RAS Q+ D VWV++D M DV GP I + VWD +K+V
Sbjct: 4 TISEKIMARASGNEQVHSDDIVWVDIDRAMMDDVLGP-RLEIDDRLREMGVDVWDPDKVV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DHY ++ V R++ E I +Y+ + G CH + + G
Sbjct: 63 IISDHYTPPANLHQANIVKFTREWAAEHKISRYYE------------FAGPCHQVMVEHG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG V++GTDSHTCT GA FATG+G+T+ VL TG+ +KVP T+R V +GE+P+
Sbjct: 111 HVLPGSVVVGTDSHTCTYGALASFATGVGSTEMAGVLATGQTWMKVPQTIRVVWNGELPE 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++AKD+ L+ IG + +GATYK++E+ G T+ R+ M+ER+ L NM VEAG K G+V D
Sbjct: 171 RVMAKDISLKTIGAVGHSGATYKTLEYAGDTIRRMIMDERLCLTNMAVEAGAKAGIVGYD 230
Query: 310 GTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
T +YL S Y+ + SD A F +EY F +L P VA PH D
Sbjct: 231 DVTAEYLARFGVSERYDHLNSDPDAVFCAEYAFTAGELAPQVACPHEVD 279
>gi|167765908|ref|ZP_02437961.1| hypothetical protein CLOSS21_00399 [Clostridium sp. SS2/1]
gi|167712406|gb|EDS22985.1| 3-isopropylmalate dehydratase, large subunit [Clostridium sp.
SS2/1]
gi|291559806|emb|CBL38606.1| 3-isopropylmalate dehydratase, large subunit [butyrate-producing
bacterium SSC/2]
Length = 413
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SR + PG VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TMIEKIISRNVGVDSVKPGQIQTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S D +R F + Y +K++ G+CH + + G
Sbjct: 62 LIYDHMVPAS------TTDDIRHFKIGDAFAKKYGMKNVHR------SDGICHQLMTECG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG++ ++VP T++ V+DG++P+
Sbjct: 110 YAKPGNIVFGTDSHTTTYGCVGCFSSGIGYTEMAAILGTGEMWVRVPETIKVVIDGKLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL++IG+++ AGATYK++EF G+TV+ +S+ RMT+ NM +EAG K + D
Sbjct: 170 NVSSKDIILRLIGDLTAAGATYKALEFSGSTVDEMSVAARMTMSNMAIEAGAKAALFAPD 229
Query: 310 GTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +Y K L + +Y DE A + + L P+VA P D +E +
Sbjct: 230 EKTAEY--SKVDLADVDWLYGDEDAEYCQTITYKAEDLVPVVACPSQVDKIRAVKEVEGT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V+IGSCT G+ ED AAA++ GKKV V + PA++K +Y V
Sbjct: 288 ELDQVFIGSCTNGRLEDLKAAAEIL--KGKKVADYVKLIVTPASRK----IYKQAVDAGY 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K I EAG P CG C G
Sbjct: 342 MK----ILAEAGA-IITHPGCGLCCG 362
>gi|295108508|emb|CBL22461.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus obeum
A2-162]
Length = 414
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 209/385 (54%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TVIEKII-RNNVGHAVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFQKLWDPDKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S +D R F Y +K++ G+CH + + G
Sbjct: 61 LIYDHLVPAS------QLDDTRHFHTGDAFAEKYGMKNVHR------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DGE+P+
Sbjct: 109 YVKPGNIVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGNMWIKVPETIKVVIDGELPE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+ V+ +S+ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDVILRLIGDLGADGATYRALEFTGSAVKNMSVASRMTIANMAIEAGSKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E + + + + DE A++L + L P++A P D + +
Sbjct: 229 EKTAEYCETELNDFQKSLVGDEDATYLKTVTYRAEDLVPVMACPSQVDKIRDVSTLEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++ L + +
Sbjct: 289 IDQVFIGSCTNGRLEDLAAAAEVL--KGKKVADYVKLIVTPASRKIYRQAIELGILDT-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG P CG C G
Sbjct: 345 ------LAEAGA-MITHPGCGLCCG 362
>gi|414155034|ref|ZP_11411350.1| 3-isopropylmalate dehydratase large subunit 1 [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411453347|emb|CCO09254.1| 3-isopropylmalate dehydratase large subunit 1 [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 418
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 203/385 (52%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + D V VD++M D P + F+ G+ +++D +++
Sbjct: 4 TIIEKILSSHSGQ-NCRANDIVVARVDLVMGQDGTSPLAIRAFENMNGK--ELFDPDRVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + ++R F E+ + YDI D GVCH + + G
Sbjct: 61 LVIDHSAPSPLEGVSALHKLMRQFAREKGCR-LYDIGD-----------GVCHQLIPESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +G++ KVP T++FV G +P
Sbjct: 109 QVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGALISGQMWFKVPETVKFVCQGTLPP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ G TY + E+ G + LSME R T+ NM +E G K G++ AD
Sbjct: 169 GVYAKDLILYLIGQVTADGCTYMAAEYTGEAIAALSMEGRFTVANMAIEMGAKAGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +L++ T Y PV +D A + +FD++ LEP VAKPH DN A E +
Sbjct: 229 DKTLAWLKNYTEQEYTPVTADPDAVYHKVLQFDVAALEPQVAKPHRVDNVAPIGEVQGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I + IG+CT G+ ED AA + G+++ V + PA++KV++D
Sbjct: 289 IQQAVIGTCTNGRLEDLRIAAAIL--EGRRIHPDVRLIVAPASRKVYLDAMA-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q AG +P CG C+G
Sbjct: 339 EGLIQKLVAAGAAV-VTPGCGPCVG 362
>gi|297616699|ref|YP_003701858.1| homoaconitate hydratase family protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297144536|gb|ADI01293.1| homoaconitate hydratase family protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 418
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 208/386 (53%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + + V ++D +M D P + F++ G+ +D ++
Sbjct: 4 TIAEKILSAKSGQ-DARANEIVVADLDFVMGQDGTSPLAIQAFEEMQGDGP--FDPRRVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E +R +RDF I YDI + GVCH L ++G
Sbjct: 61 MVIDHSAPSPLEGVSRLHAKMRDFARRYGI-ILYDIGE-----------GVCHQLLPEKG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++G DSHTCT GA FATG+G+TD + +GK+ KVP T++FV++G +P
Sbjct: 109 HVGPGSLVIGADSHTCTYGAINAFATGVGSTDLAAGIISGKMWFKVPETIKFVINGRLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL +IG+++ GATY + E+ G ++ LS+E R T+ NM +E G K G++ AD
Sbjct: 169 GVYSKDLILYLIGDVTADGATYMAAEYTGEAIKTLSVEARFTISNMAIEMGAKVGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ T +EPV +D A++ + +D+S+LEP VAKPH+ DN +
Sbjct: 229 EKTMEWVRKHTDRTFEPVEADPDAAYAAVKEYDVSELEPQVAKPHTVDNVVPVSQVAGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF---LVPATQKVWMDVYTLPVPGSG 426
+ + IG+CT G+ ED AA + G+K+ P F + PA+++V +D
Sbjct: 289 VQQGVIGTCTNGRLEDLRVAASIL--EGRKIH-PNFRLIVAPASRQVMLDAIR------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG +P CG C+G
Sbjct: 339 -EGVLQTLIEAGAAV-VTPGCGPCVG 362
>gi|134300177|ref|YP_001113673.1| homoaconitate hydratase family protein [Desulfotomaculum reducens
MI-1]
gi|134052877|gb|ABO50848.1| 3-isopropylmalate dehydratase, large subunit [Desulfotomaculum
reducens MI-1]
Length = 418
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 203/385 (52%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + D V VD +M D P I E + +++D EK+
Sbjct: 4 TIIEKILSSHSGQ-DCQANDIVVAQVDFVMGQDGTSP--LAIRAYENMDGKELFDPEKVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + I+R F ++ + YDI + GVCH + + G
Sbjct: 61 LVIDHSSPSPLEGVSALHKIMRQFAKQKGC-HLYDIGE-----------GVCHQLIPESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +GK+ KVP T++FV +G +P
Sbjct: 109 KVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGGLISGKMWFKVPETIKFVCNGVLPS 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ G TY + E+ G + LSME R T+ NM +E G K G++ AD
Sbjct: 169 GVYAKDLILYLIGQVTADGCTYMAAEYTGEAIAALSMEGRFTISNMAIEMGAKAGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF +L+ T + V +D A++ D+S LEP VAKPH DN + E K +
Sbjct: 229 DKTFAWLKQYTERQFTAVSADANANYYKVLELDVSNLEPQVAKPHRVDNVSPLSEVKGLP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I + ++G+CT G+ ED AA + +GKKV V + PA++K++++
Sbjct: 289 IQQAFLGTCTNGRLEDLRIAASIL--AGKKVHPDVRFIVAPASRKIYLEAME-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG +P CG C+G
Sbjct: 339 EGVIQRLVEAGAAV-VTPGCGPCVG 362
>gi|332298031|ref|YP_004439953.1| homoaconitate hydratase family protein [Treponema brennaborense DSM
12168]
gi|332181134|gb|AEE16822.1| homoaconitate hydratase family protein [Treponema brennaborense DSM
12168]
Length = 436
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 213/418 (50%), Gaps = 49/418 (11%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWV-NVDILMTHDVCGPGSFGIFKKEFGENAK--VWDR 125
T+ +KIF + +EKP + WV +D + H++ P + + EN K V+D
Sbjct: 4 TIAQKIFETHVAEKPF----QDTWVLKLDRVFCHEITTP----VAITDLAENGKDRVFDP 55
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
KI + DH D + ILR++ +IK F+DI AN GVCH
Sbjct: 56 SKIKAVIDHVTPAKDSKTALQGKILREWAFRNHIKDFFDIG------AN----GVCHAIF 105
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
++G RPG ++ DSHTCT GAFG FA G+G TD + G K P T++FVL+G
Sbjct: 106 PEKGFVRPGFTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFKEPKTIKFVLNG 165
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+P + AKD+IL IIG+I V GAT MEF G ++ +SME RMT+CNM VEAG +G+
Sbjct: 166 TLPAGVYAKDVILYIIGKIGVNGATNCVMEFAGPIIDAMSMEARMTVCNMAVEAGATSGI 225
Query: 306 VPADGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHS 355
D TT +YL ++ Y SD A++ Y +D+S LEPL
Sbjct: 226 CMPDMTTVEYLWPFIKDDFASKEAALAEYATWCSDADAAYERVYTYDLSDLEPLATFGFK 285
Query: 356 PDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPAT 410
PD RE K+D+VYIGSCT G+ ED AAKV L+ GK++ V L PAT
Sbjct: 286 PDQVKPIRELAGTKVDQVYIGSCTNGRIEDLREAAKVLAEALSQGKRIAPGVRGILSPAT 345
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLGGPKDTYARMNEPMAS 467
++ + + F + G C T +P+CGACLG A NE AS
Sbjct: 346 PSIYKKALEEGILAT--------FMDFGFCVT--NPTCGACLGMSNGVLAE-NEVCAS 392
>gi|374297182|ref|YP_005047373.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Clostridium clariflavum DSM
19732]
gi|359826676|gb|AEV69449.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Clostridium clariflavum DSM
19732]
Length = 428
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 203/396 (51%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIF+ + + + D + +D + H++ P I + +V+D KI
Sbjct: 4 TLVEKIFN--AHRVDMPFEDTHVLKLDAVFCHEITTP--IAITDLQARGMDRVFDPSKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILR++ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILREWARRHGIKDFFDI----------GRNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P T++ VL+G++
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRTPKTIKIVLNGKLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL II E++V GAT K +EF G V+ +SME RMTLCNM +EAG GV D
Sbjct: 170 GVFAKDVILYIIKELTVNGATNKIIEFTGPIVDEMSMEARMTLCNMAIEAGATCGVCYPD 229
Query: 310 GTTFKYLEDKTSLPYEP----------VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D +E SDE A++ Y FD+S LEP+ + PD
Sbjct: 230 MTTVEYLWDYIKDEFESKEAALKEYSKWISDEGANYEKVYEFDLSDLEPMATFGYKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
RE K+D++YIGSCT G+ ED AA+V GKK+ V + PAT V+
Sbjct: 290 KPVREMAGTKVDQIYIGSCTNGRIEDLRVAAQVL--KGKKISDNVRGIVSPATPGVYSQA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF++AG C T +P+CGACLG
Sbjct: 348 LKEGI--------IEIFQDAGFCVT--NPTCGACLG 373
>gi|212704844|ref|ZP_03312972.1| hypothetical protein DESPIG_02911 [Desulfovibrio piger ATCC 29098]
gi|212671806|gb|EEB32289.1| putative 3-isopropylmalate dehydratase, large subunit
[Desulfovibrio piger ATCC 29098]
Length = 420
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 205/387 (52%), Gaps = 26/387 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI ++ G V + +++ +D+ GP + FK ++V+D++KI
Sbjct: 4 TLAQKILQAHTDDVIERDGQIVQCRLSLVLANDITGPLAIKSFKGMGA--SRVFDKDKIA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D + V I R F EQ I ++Y+ D G V H L + G
Sbjct: 62 LVMDHFTPQKDIASANQVMISRQFAQEQGITHYYEGGDCG----------VEHTLLPERG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHTCT G G FATG+G+TD + G+ +KVPPT+R ++G+MP
Sbjct: 112 LVGPGDVVIGADSHTCTYGGIGAFATGMGSTDIAAGMALGETWIKVPPTIRVNINGQMPK 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+L KDL+L +I I V GA YK++EF G+ ++ L +E R+T+ NM +EAGGK G+ D
Sbjct: 172 WLRGKDLMLLLIKTIGVDGALYKALEFGGSVIDALPVEGRLTMANMAIEAGGKVGLFAVD 231
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +Y E + +DE A + D++ EP+VA PH P N E KD+
Sbjct: 232 ELTRQYCAEHGRPGVTMSLAADEGAVYERVVDIDVTGQEPVVACPHLPSNVKNVSELKDL 291
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
+ +V +GSCT G+ D AA++ G+KV V ++P+T VW
Sbjct: 292 PVQQVVVGSCTNGRISDMRDAAEIL--RGRKVAKGVRCIVLPSTPAVWKQCLK------- 342
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++F +AGC +CG CLGG
Sbjct: 343 -EGLMEVFMDAGC-IVGPCTCGPCLGG 367
>gi|160903139|ref|YP_001568720.1| homoaconitate hydratase family protein [Petrotoga mobilis SJ95]
gi|160360783|gb|ABX32397.1| homoaconitate hydratase family protein [Petrotoga mobilis SJ95]
Length = 419
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 210/385 (54%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKIFS + + G+ V V+VD +M D P + F+ + KV EK+
Sbjct: 6 TISEKIFSDHLGR-DVEAGEIVIVDVDFMMGQDGTTPLAIKTFENVGAK--KVAYPEKVA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + E+ + ++RDF K FYDI + G+CH + ++G
Sbjct: 63 FVIDHNAPSPSEKVSALHKLMRDFSSNYGTK-FYDIGE-----------GICHQLMPEKG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG++++G DSHTCT GA F+TG+G+TD + +GK+ KVP +++ VL+G +
Sbjct: 111 HALPGQIVIGADSHTCTYGALNCFSTGVGSTDLAIAMASGKLWFKVPQSIKIVLEGSLSK 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+ L +I ++ GATYK++EF G ++ LS+E R T+ NM VE G K G++ D
Sbjct: 171 GIYSKDVALYVIKNMTANGATYKAVEFEGPVIDNLSVEARFTISNMSVEMGAKVGLMKLD 230
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
+++++T P++ SDE A++ Y+FD+S LEP VAKPH+ DN + E + +
Sbjct: 231 EKAENWIKERTDKPFKSYESDEGANYEKIYKFDVSDLEPQVAKPHAVDNVSPISEVEGIP 290
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I + +G+CT G+ ED AA + G+K+ V + PA++ +
Sbjct: 291 IHQGLLGTCTNGRIEDLRIAANIL--KGRKIHKGVRLIVAPASKDTLLKAMN-------- 340
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q +AG T +P CG C+G
Sbjct: 341 EGIIQTLIQAGA-TVVAPGCGPCVG 364
>gi|291562925|emb|CBL41741.1| 3-isopropylmalate dehydratase, large subunit [butyrate-producing
bacterium SS3/4]
Length = 416
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 191/368 (51%), Gaps = 24/368 (6%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D +M++D + +++ + ++ + D +K+V I DH + + +
Sbjct: 19 VKPGDIHTVTLDRMMSNDGTTHLTVDMYRNKL-KHPHIADTKKMVFIVDHNVPSDCPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E NI ++ + KGVCH + + C PGE++ G DSHT
Sbjct: 78 ASQKKMRDFAKENNIDFW-------------EGKGVCHQVMMEHYVC-PGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TGK + VP T++F L G++P+ + A+DLIL IIG I
Sbjct: 124 CSYGALGAFGTGVGCTDLLYGMVTGKSWVLVPETVKFNLVGKLPEGVYARDLILTIIGTI 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + LS+ ERM LCNM VEAG K G+ D +YLE P
Sbjct: 184 GANGCNYQVMEFTGEGAKTLSISERMVLCNMAVEAGAKTGIFEPDEKAIEYLEAHGRKPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
SD A + EY FD+SK+ P+VAKP DN A E + VKID ++GSC G+ E
Sbjct: 244 ALFTSDPDAVYAREYTFDLSKIRPVVAKPDFVDNLVPAEEVRGVKIDEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPAS 444
D A + KV +VPA+Q V++ + F E G +
Sbjct: 304 DLRVGASILKGRHVAEKVRFLVVPASQTVYLQALK--------EGLIDTFIEGGA-IVMN 354
Query: 445 PSCGACLG 452
P+C C G
Sbjct: 355 PNCSVCWG 362
>gi|334339888|ref|YP_004544868.1| homoaconitate hydratase family protein [Desulfotomaculum ruminis
DSM 2154]
gi|334091242|gb|AEG59582.1| homoaconitate hydratase family protein [Desulfotomaculum ruminis
DSM 2154]
Length = 418
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 207/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + + + GD V VD +M D P + F+ G+ ++++ +K+
Sbjct: 4 TIIEKILSAHSGQ-ECTAGDIVVAQVDFVMGQDGTSPLAIRAFENMDGK--ELFNPDKVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + E + ++R+F + + YDI + GVCH + + G
Sbjct: 61 LVIDHSSPSPLEGVSALHKLMREFAKSKGCR-MYDIGE-----------GVCHQLIPESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +GK+ KVP T++FV +G +P
Sbjct: 109 KVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGGLISGKMWFKVPETVKFVCNGTLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL ++G+++ G TY + E+ G + LSME R T+ NM +E G K G++ AD
Sbjct: 169 GIYAKDLILYLMGQVTADGCTYMAAEYTGEAITDLSMEGRFTVSNMAIEMGAKAGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF++L+ T ++ V SD A + FD+S+LEP VAKPH DN + E
Sbjct: 229 HKTFEWLKQHTDRQFQAVASDPDARYQRVLEFDVSQLEPQVAKPHRVDNVSPISEVLGTP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+ + IG+CT G+ ED AA + GKK+ V + PA++K+++D
Sbjct: 289 VQQAVIGTCTNGRLEDLRIAASIL--EGKKIHSDVRLIVAPASRKIYLDAMN-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ Q EAG +P CG C+G
Sbjct: 339 EGTLQKLVEAGAAV-VTPGCGPCVG 362
>gi|156743413|ref|YP_001433542.1| 3-isopropylmalate dehydratase large subunit [Roseiflexus
castenholzii DSM 13941]
gi|156234741|gb|ABU59524.1| homoaconitate hydratase family protein [Roseiflexus castenholzii
DSM 13941]
Length = 419
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 212/420 (50%), Gaps = 46/420 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL E+I SRA+ +P +S G+N+ VD+ M HD P I +E G +VWDR+++
Sbjct: 4 TLAEQILSRAAGRP-VSAGENIVARVDLAMMHDSISPSIIKILHQELGAE-QVWDRDRVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + + + LR + +Q I +F+D+ +G+ H L +EG
Sbjct: 62 VVVDHVAPAATIQNAEHQLALRRWVRQQQITHFFDVG-----------RGISHPVLVEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++LG+DSH+ GA G F G+G+TD L TG+ L+VP T+R + G
Sbjct: 111 LARPGMLILGSDSHSTAYGAVGAFGAGMGSTDMALALATGQTWLRVPETVRILARGRFRP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL L++ I GATY+S+E+ G VE LS+ ERMTL + +E GGK G++P
Sbjct: 171 GVGAKDLGLRVARLIGADGATYQSVEWHG--VEELSVGERMTLATLSIEIGGKAGIIPPT 228
Query: 310 GTTFKYLEDKTSLPYEPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
G ++ + + P + +E A + D+ LEP ++ PH DN E
Sbjct: 229 GPGWEEHAARRGI-IAPSWLCVEEGARYSRTVEVDLDTLEPQISVPHFVDNVRDLSELGR 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V++D VYIG+CT G D AAA++ G+KV V +VPA+ + +
Sbjct: 288 VEVDVVYIGTCTNGHANDMAAAARIL--KGRKVARGVRLLVVPASSEALQQA-------T 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG---------------GPKDTYARMNEPMASLCL 470
T + + EAG +P CGAC+G G ++ RM P A + L
Sbjct: 339 ADGTLATLL-EAGAAI-GTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYL 396
>gi|420247870|ref|ZP_14751255.1| homoaconitate hydratase family protein [Burkholderia sp. BT03]
gi|398069973|gb|EJL61296.1| homoaconitate hydratase family protein [Burkholderia sp. BT03]
Length = 422
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 199/388 (51%), Gaps = 27/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ + A +P++ G+ V NVD+ M HD GP ++ G A +WD+ K
Sbjct: 4 AQTLAQKLIAAACGRPEVEVGEIVTCNVDLAMFHDSSGPRRLQPMLEQLG--ASLWDKSK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ +D+ + R V I R + Q + YD G+CH+ L +
Sbjct: 62 VVLVIDHYVPEADDESRRIVRIARQWASAQQLPNVYD------------SVGICHVVLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG +G DSH+ T GAFG + GIG+T+ V +G++ +KVP TL+ +
Sbjct: 110 RGHLRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVSGQIWVKVPETLQMNWRHRL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD++L +IG + G Y+++EF G + LSM+ERMTL NM E G + G++
Sbjct: 170 SCGVTAKDMMLHMIGRFGMNGGRYQAVEFCGEAINALSMQERMTLSNMSAELGAQVGLIA 229
Query: 308 ADGTTFKYLED---KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D T YL + + SD +A + + FD ++L P VA PHSP N
Sbjct: 230 PDAITVDYLRAAGVQDEIDVARWQSDPQAR-VETHDFDAAQLAPQVAAPHSPANTRDVGA 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
DV + YIG+CTG K ED AAA++ G++V LV A +
Sbjct: 289 FGDVAVQVAYIGACTGAKLEDLRAAARIL--RGRRVAEGVQLVVAPASI------RDQSQ 340
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + + E AG A+ +CGAC G
Sbjct: 341 AASEGVMDVLEAAGAQVLAT-TCGACAG 367
>gi|357420389|ref|YP_004933381.1| homoaconitate hydratase [Thermovirga lienii DSM 17291]
gi|355397855|gb|AER67284.1| homoaconitate hydratase family protein [Thermovirga lienii DSM
17291]
Length = 426
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 209/395 (52%), Gaps = 43/395 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KI RAS K ++ PGD VW N+D+ D GP F KE KVW+ +KI
Sbjct: 4 TMIQKIIQRASGK-EVKPGDRVWCNIDLSTARDFAGPNCVLQFDKETEGKGKVWNPDKIA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
D + E+ N ++R+F Q I +D+ N+ G+ L + G
Sbjct: 63 FTFDLEAPSRSEQVANNQKLIREFAKRQGITKVFDV----NW-------GIGQHVLLEHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD--AGFVLGTGKVLLKVPPTLRFVLDGEM 247
+PG V+LGTDSH GA G FATG+GNTD A ++L GK+ +VP T++ + G
Sbjct: 112 LVKPGWVILGTDSHMNLLGAVGAFATGVGNTDIVASWIL--GKLWYRVPETVKIKVTGSF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ +DL+ +I+G + G YK++EFVG T+E+ ++ ER+TLC+MV E GK G++
Sbjct: 170 KKGVCMRDLLTKIVGTLGAGGLIYKAVEFVGPTIEKSNLAERITLCSMVTEMSGKIGLIQ 229
Query: 308 ADGTTFKYL-----EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
+G ++L E+ L E + +D A + EY F++ LEP+V+ P +PDN
Sbjct: 230 PNGEVLEWLKARAGEEAVELA-EAIKADPDAVYSEEYEFNVDDLEPMVSAPDAPDNVKTV 288
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
RE ++D+V+IGSC+ G+ ED AA +V A+ K+ + + PAT++V
Sbjct: 289 REVAGERLDQVHIGSCSNGRFEDIKAAFEVLKAANFKIAPGMRVIITPATREVM------ 342
Query: 421 PVPGSGGKTCSQI-----FEEAGCDTPASPSCGAC 450
K C+Q F +AG +P+C C
Sbjct: 343 -------KQCAQAGFIEKFLDAGV-IFTNPTCALC 369
>gi|296109201|ref|YP_003616150.1| homoaconitate hydratase family protein [methanocaldococcus infernus
ME]
gi|295434015|gb|ADG13186.1| homoaconitate hydratase family protein [Methanocaldococcus infernus
ME]
Length = 416
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 214/401 (53%), Gaps = 38/401 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M+L E I S+ + +++ G+ + + D+ MTHD P ++ K E G K+ EKI
Sbjct: 1 MSLIEAIISKKAGY-EVTAGETLTLKADLAMTHDGSTPLAYRALK-EMGAEVKI--PEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DH + + ++ I +F + NIK F+ P +G+CH LA E
Sbjct: 57 VICFDHTVPPNTVKSAEFQKIALEFVKKFNIKNFH-----------PGGEGICHQILA-E 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ P + G DSHTCT GAFG FATG G TD ++ TG+ +KVP T+R + GE P
Sbjct: 105 NYVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVPETIRVNIVGENP 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD+IL++ EI A YK++EF G V+++ M R+TLCNM +E G K GV+ A
Sbjct: 165 N-ISPKDIILRVCKEIG-KRAIYKAIEFGGEVVKKMDMSGRLTLCNMAIEMGAKTGVIEA 222
Query: 309 DGTTFKYLEDKTSLPYEPV-------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
D TF YL ++ L E + E+ +++ E DI+++E +A PHSPDN
Sbjct: 223 DEITFNYLREERGLSEEKINKLKREAIKVEEGNYIKEIFIDITEMEEQIALPHSPDNVKP 282
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYT 419
E + ++ID+V+IGSCT G+ ED AK GKKV V ++PA++KV++
Sbjct: 283 ISEVEGLEIDQVFIGSCTNGRIEDLRIVAKYL--KGKKVHKDVKLIIIPASKKVYLKALK 340
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ +IF +AG P CG CLG + A
Sbjct: 341 --------EGLIEIFIKAGA-MICPPGCGPCLGAHQGVLAE 372
>gi|169831198|ref|YP_001717180.1| homoaconitate hydratase family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638042|gb|ACA59548.1| homoaconitate hydratase family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 418
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 197/384 (51%), Gaps = 24/384 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
+ + EKI SR S + + GD V VD +M D P + F+ G+ ++D K+
Sbjct: 3 LNIIEKILSRKSGR-AVRVGDIVVAEVDFVMGQDGTSPLAINAFRAMGGK--ALFDPAKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH + E + +R+F E + YD+ D GVCH + +
Sbjct: 60 ALVIDHSAPSPSEGVSNLHKFMRNFARETGC-HLYDVGD-----------GVCHQLMLES 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +++G DSHTCT GA FATG+G+TD L +G++ KVPPTL+FV G +P
Sbjct: 108 GAVGPGSLVVGADSHTCTYGALNAFATGVGSTDLAAALISGRMWFKVPPTLKFVCHGILP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ +KDLIL +IG+++ GATY S+EF G V LSME R T+ NM VE G K G++ A
Sbjct: 168 PGVYSKDLILFLIGQVTADGATYMSVEFSGEAVRALSMEARFTISNMAVEMGAKAGLMEA 227
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +++ + +EP D A + FD+S LEP VA+PH DN A E +
Sbjct: 228 DERTAEWVARYSRRTFEPAAPDPDAVYERILEFDVSGLEPQVARPHRVDNVAPLSEVAGL 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D +G+CT G+ ED AA + +V + PA++ V++
Sbjct: 288 PVDEAVLGTCTNGRLEDLRIAAALVRRYRVSPRVRFIVAPASRHVYLQALR--------D 339
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
+ +AG +P CG C+G
Sbjct: 340 GTLETLVQAGAAV-VTPGCGPCVG 362
>gi|390576475|ref|ZP_10256537.1| 3-isopropylmalate dehydratase large subunit [Burkholderia terrae
BS001]
gi|389931565|gb|EIM93631.1| 3-isopropylmalate dehydratase large subunit [Burkholderia terrae
BS001]
Length = 422
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 199/388 (51%), Gaps = 27/388 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +K+ + A +P++ G+ V NVD+ M HD GP ++ G A +WD+ K
Sbjct: 4 AQTLAQKLIAAACGRPEVEVGEIVTCNVDLAMFHDSSGPRRLQPMLEQLG--ASLWDKSK 61
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ +D+ + R V I R + Q + YD G+CH+ L +
Sbjct: 62 VVLVIDHYVPEADDESRRIVRIARQWASAQQLPNVYD------------SVGICHVVLPE 109
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG +G DSH+ T GAFG + GIG+T+ V +G++ +KVP TL+ +
Sbjct: 110 RGHLRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVSGQIWVKVPETLQMNWRHRL 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD++L +IG + G Y+++EF G + LSM+ERMTL NM E G + G++
Sbjct: 170 SCGVTAKDMMLHMIGRFGMNGGRYQAVEFCGEAINALSMQERMTLSNMSAELGSQVGLIA 229
Query: 308 ADGTTFKYLED---KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D T YL + + SD +A + + FD ++L P VA PHSP N
Sbjct: 230 PDAITVDYLRAAGVQDEIDVARWQSDPQAR-VETHDFDAAQLAPQVAAPHSPANTRDVGA 288
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
DV + YIG+CTG K ED AAA++ G++V LV A +
Sbjct: 289 FGDVAVQVAYIGACTGAKLEDLRAAARIL--RGRRVAEGVQLVVAPASI------RDQSQ 340
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + + E AG A+ +CGAC G
Sbjct: 341 AASEGVMDVLEAAGAQVLAT-TCGACAG 367
>gi|222054636|ref|YP_002536998.1| 3-isopropylmalate dehydratase large subunit [Geobacter daltonii
FRC-32]
gi|221563925|gb|ACM19897.1| homoaconitate hydratase family protein [Geobacter daltonii FRC-32]
Length = 427
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 208/398 (52%), Gaps = 41/398 (10%)
Query: 69 MTLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKIF S ++P G V + +D++M H++ P + + + +V+D K
Sbjct: 3 MTIAEKIFKSHLVDEP--FSGTRV-LKLDVVMCHEITTPIAIADLMER--KKDRVFDTGK 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I + DH + D + +LRD+ I F+DI AN GVCH +
Sbjct: 58 IKAVIDHVTPSKDSKTATQAKMLRDWARRHAIPDFFDIG------AN----GVCHALFPE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G+ RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R L+G++
Sbjct: 108 KGYIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRDPKTIRINLNGKL 167
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P + AKD+IL +IG ++V GAT + MEF G V+ ++ME RMTLCNM +EAGG +G+
Sbjct: 168 PKGVYAKDVILHVIGRLTVNGATDRVMEFRGAVVDSMTMESRMTLCNMAIEAGGTSGICM 227
Query: 308 ADGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD 357
D T YL + ++ +SDE A++ D+S LEP+V + PD
Sbjct: 228 PDSVTVDYLWPFINKEYASREAALADFKKWWSDEDATYDQVVDIDVSSLEPVVTFGYKPD 287
Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWM 415
+ +D+VY+GSCT G+ ED AA + GKK+ V L PAT K++
Sbjct: 288 QVKTIGDIAGTPVDQVYLGSCTNGRLEDLRIAAAIL--KGKKIASSVRAILSPATPKIYS 345
Query: 416 DVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
D + IF +AG C T +P+CGACLG
Sbjct: 346 DALN--------EGLIAIFMDAGFCVT--NPTCGACLG 373
>gi|261403414|ref|YP_003247638.1| homoaconitate hydratase family protein [Methanocaldococcus
vulcanius M7]
gi|261370407|gb|ACX73156.1| homoaconitate hydratase family protein [Methanocaldococcus
vulcanius M7]
Length = 419
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 209/401 (52%), Gaps = 35/401 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M+L EKI S+ + + +S GD++ V VD+ MTHD P ++ + E N VWD EKI
Sbjct: 1 MSLVEKILSKKTGE-DISAGDSIEVEVDLAMTHDGTTPLTYKALQ-EMSNN--VWDPEKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DH + + +A ++ +E K+ G +G+CH LA E
Sbjct: 57 VIAFDHNVPPNTVKAAE----MQKLTLEFVKKFKIKKFHKGG-------EGICHQILA-E 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ P + G DSHTCT GAFG FATG G TD ++ TG+ +KVP T++ + G
Sbjct: 105 NYVLPNMFIAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVPKTIKVEITGRNE 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD++L++ EI GATY ++E+ G V+ +SM RMTLCNM +E GGK G++
Sbjct: 165 N-ISAKDIVLKVCKEIGRRGATYMAIEYCGEVVKNMSMASRMTLCNMAIEMGGKTGIIET 223
Query: 309 DGTTFKYLEDKTSLPYEPV---------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
D T+ YL+ + L + + + ++A++ E DI+ +E +A PH PDN
Sbjct: 224 DEITYNYLKKERGLSDDDINKLKKERITVNKDEANYHKEVVIDITDMEEQIAVPHHPDNV 283
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E ID+V+IGSCT G+ ED AAK V ++PA++KV++
Sbjct: 284 KPVSEVAGKAIDQVFIGSCTNGRLEDLREAAKYLKGRRVHEDVKLIVIPASKKVFLQALK 343
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ ++F +AG +P CG CLG + A
Sbjct: 344 EGII--------EVFIKAGA-MICTPGCGPCLGAHQGVLAE 375
>gi|429763176|ref|ZP_19295532.1| putative homoaconitate hydratase [Anaerostipes hadrus DSM 3319]
gi|429179351|gb|EKY20605.1| putative homoaconitate hydratase [Anaerostipes hadrus DSM 3319]
Length = 413
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SR + PG VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TMIEKIISRNVGVDSVKPGQIQTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S D +R F + Y +K++ G+CH + + G
Sbjct: 62 LIYDHMVPAS------TTDDIRHFKIGDAFAKKYGMKNVHR------SDGICHQLMTECG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG++ ++VP T++ V+DG++P+
Sbjct: 110 YAKPGNIVFGTDSHTTTYGCVGCFSSGIGYTEMAAILGTGEMWVRVPETIKVVIDGKLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL++IG+++ AGATYK++EF G+TV+ +S+ RMT+ NM +EAG K + D
Sbjct: 170 NVSSKDIILRLIGDLTAAGATYKALEFSGSTVDEMSVAARMTMSNMAIEAGAKAALFAPD 229
Query: 310 GTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +Y K L + +Y DE A + + L P+VA P D +E +
Sbjct: 230 EKTAEY--SKVDLADVDWLYGDEDAEYCQTITYKAEDLVPVVACPSQVDKIRAVKEVEGT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V+IGSCT G+ ED AA++ GKKV V + PA++K +Y V
Sbjct: 288 ELDQVFIGSCTNGRLEDLKVAAEIL--KGKKVADYVKLIVTPASRK----IYKQAVDAGY 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K I EAG P CG C G
Sbjct: 342 MK----ILAEAGA-IITHPGCGLCCG 362
>gi|39997001|ref|NP_952952.1| 3-isopropylmalate dehydratase large subunit [Geobacter
sulfurreducens PCA]
gi|409912430|ref|YP_006890895.1| isopropylmalate/citramalate isomerase, large subunit [Geobacter
sulfurreducens KN400]
gi|81702137|sp|Q74BX5.1|LEUC_GEOSL RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|39983889|gb|AAR35279.1| isopropylmalate/citramalate isomerase, large subunit [Geobacter
sulfurreducens PCA]
gi|298506018|gb|ADI84741.1| isopropylmalate/citramalate isomerase, large subunit [Geobacter
sulfurreducens KN400]
Length = 427
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 206/397 (51%), Gaps = 41/397 (10%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF S ++P G V + +D++M H++ P + G++ +V+D KI
Sbjct: 4 TIAEKIFASHLVDEP--FAGTKV-LRLDVVMCHEITTPIAIADLMAR-GKD-RVFDPTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + +LRD+ I F+D+ AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKMLRDWARRHGIVDFFDVG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA GIG TD + G + P T+R L+G +P
Sbjct: 109 GFIRPGYTVIMGDSHTCTHGAFGAFAAGIGTTDLEVGILKGVCAFREPKTIRINLNGSLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD+IL +IG I V GAT + MEF G+ V+ ++ME RMTLCNM +EAGG +G+
Sbjct: 169 EGVYAKDVILHVIGRIGVNGATDRVMEFRGSVVDTMTMESRMTLCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL + + SDE A + FD+S LEP+V + PD
Sbjct: 229 DMVTVDYLWPFLKDEYQSREAALAAFSLWRSDEDAVYEQVLDFDVSSLEPIVTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMD 416
E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT K++ D
Sbjct: 289 VKPVSEIAGTPVDQVYLGSCTNGRLEDLRIAARIL--KGKKIAPTVRGILSPATPKIYQD 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ IF EAG C T +P+CGACLG
Sbjct: 347 AMR--------EGLIDIFMEAGFCVT--NPTCGACLG 373
>gi|289193084|ref|YP_003459025.1| 3-isopropylmalate dehydratase [Methanocaldococcus sp. FS406-22]
gi|288939534|gb|ADC70289.1| 3-isopropylmalate dehydratase [Methanocaldococcus sp. FS406-22]
Length = 420
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 208/400 (52%), Gaps = 35/400 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L EKI S+ ++ GD++ V VD+ MTHD P ++ K+ + VW+ +KI
Sbjct: 1 MALVEKILSKKV-GYEVCAGDSIEVEVDLAMTHDGTTPLAYKALKEM---SDSVWNPDKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+ DH + + +A + +F NIK F+ +G+CH LA E
Sbjct: 57 VVAFDHNVPANTVKAAEMQKLALEFVKRFNIKKFH-----------KGGEGICHQILA-E 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ P + G DSHTCT GAFG FATG G TD ++ TG+ +KVP T+R + G+
Sbjct: 105 NYVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVPKTIRVDIVGKNE 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + KD++L++ EI GATY ++E+ G V+ + M+ R+TLCNM +E GGK GV+ A
Sbjct: 165 N-ISPKDIVLRVCKEIGRRGATYMAIEYGGEVVKNMDMDGRLTLCNMAIEMGGKTGVIEA 223
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEK---------ASFLSEYRFDISKLEPLVAKPHSPDNR 359
D T+ YL+ + +L E + +K A++ E DI+ +E +A PH PDN
Sbjct: 224 DDITYNYLKKERNLSDEEIVKLKKERITVDRDEANYYKEIEIDITDMEEQIAVPHHPDNV 283
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E + +I++V+IGSCT G+ D AAK V ++PA++KV+M
Sbjct: 284 KPVSEVEGTEINQVFIGSCTNGRLSDLREAAKYLKGREIHKDVKLIVIPASKKVFMQALK 343
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ IF +AG +P CG CLG + A
Sbjct: 344 --------EGLIDIFVKAGA-MICTPGCGPCLGAHQGVLA 374
>gi|160938761|ref|ZP_02086113.1| hypothetical protein CLOBOL_03656 [Clostridium bolteae ATCC
BAA-613]
gi|158438460|gb|EDP16219.1| hypothetical protein CLOBOL_03656 [Clostridium bolteae ATCC
BAA-613]
Length = 432
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 200/391 (51%), Gaps = 23/391 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI ++ S + ++ G+ + ++D +D+ + F++ GE KVWDR+K
Sbjct: 1 MHAIEKILAKHSGRDRVVSGEIITADIDFAEINDLYLQTIYS-FREMGGE--KVWDRDKA 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DHY + A+RN +R F EQ + + +DI G+CH + +
Sbjct: 58 AFVFDHYAPSPTIEASRNHREMRLFRQEQGLTHHFDIN-----------AGICHQVMPEA 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +L+ TDSHT T GAFG TGIG TD VL TGK+ +VP +R L+G
Sbjct: 107 GLVYPGMILVATDSHTTTHGAFGCLGTGIGATDMATVLITGKLWFRVPEIIRIHLEGMPG 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++L KD+IL IIG++ GA YK++EF G+ VE+L + RM LCNM VE G K +
Sbjct: 167 SHVLPKDVILYIIGKMKADGAVYKAIEFTGSYVEQLDVAGRMVLCNMAVEMGAKTAYMEP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ Y+ +TS P+ +D + Y FDIS L+P V+ P S DN V
Sbjct: 227 NQAVLDYVAGRTSRPFTVEQTDGDFEYEETYVFDISGLKPQVSMPSSVDNVGAVALAGRV 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ID+ ++G+CTGG+ ED AA++ V ++PA+ +V + K
Sbjct: 287 RIDQAFVGACTGGRVEDIGEAARILKGRTIAPHVRMVVIPASAEVLKECIA--------K 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+AG T ++P CG CL + A
Sbjct: 339 GFLDTLIDAGA-TISAPGCGPCLSAHQGVLA 368
>gi|448733229|ref|ZP_21715474.1| 3-isopropylmalate dehydratase [Halococcus salifodinae DSM 8989]
gi|445802963|gb|EMA53263.1| 3-isopropylmalate dehydratase [Halococcus salifodinae DSM 8989]
Length = 438
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 188/348 (54%), Gaps = 16/348 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S ++ + G+ V ++D+ M HD+ GP +F F G++A+++ E+ V
Sbjct: 5 TIAEKILSEKADT-DVRAGEYVEADIDVAMAHDITGPLAFETFDDVTGDDAELFAPERTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH+ +A N + +R+F E F D+G+ G+CH L +EG
Sbjct: 64 FTIDHHAPADGVKAANNHNAVREFAAEHGAHQF----DVGD--------GICHAVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG + ++P T RF + G++PD
Sbjct: 112 FVHPGDLVVGADSHSTTYGGIGAFGTGVGSTDLGTALATGDLWFRIPETKRFEVHGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TY++ E+ G +E L + ER+ L NM +E GGK G V D
Sbjct: 172 GVYAKDLILKFIGDVGFDGCTYQAAEYGGGAIESLPIHERLVLSNMAIEMGGKTGFVEPD 231
Query: 310 GTTFKYLEDKTSLPYE---PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YLE + + + P D+ A + S + + + L P V+KP +P+N +
Sbjct: 232 ERTASYLEHQAGIECDLDGPTSPDDDAVYESIHTYQATDLAPQVSKPANPENAVDVGAVE 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVW 414
ID++++G+CT G+ ED A V V +VPA+ V+
Sbjct: 292 GTPIDQLFVGTCTNGRYEDIKLVADVVEGEELAPNVRMVVVPASGSVY 339
>gi|222479530|ref|YP_002565767.1| 3-isopropylmalate dehydratase [Halorubrum lacusprofundi ATCC 49239]
gi|222452432|gb|ACM56697.1| 3-isopropylmalate dehydratase [Halorubrum lacusprofundi ATCC 49239]
Length = 437
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 210/386 (54%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EK+ S S + + GD V VD++MTHDV GP +F +F+ G++ ++ D + V
Sbjct: 5 TISEKLLSEKSGR-DVRAGDYVEAEVDVMMTHDVTGPLTFEVFEDVTGDDPELVDPDNTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH+ A N +I+R+F + YD+ D G+CH L +EG
Sbjct: 64 ITIDHHAPADGVEAANNHNIVREFADTYGAQQ-YDVGD-----------GICHQVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF ++G++PD
Sbjct: 112 FVSPGDLVIGADSHSTTFGGVGGFGTGVGSTDLGTTLATGELWFRVPETLRFEVEGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TYK+ E+ G+ VE L + ER+ L NM +E GGK G+VP D
Sbjct: 172 GVYAKDLILKFIGDVGFDGCTYKTAEYGGSAVEALPIHERLVLSNMAIEMGGKAGIVPPD 231
Query: 310 GTTFKYLEDKT-SLPYEPVYS--DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T +LE +T P P Y+ D+ A + + + + L P V+ P +P+N E
Sbjct: 232 ERTLDFLEAQTGERPEIPAYTQPDDDADYEAVHTYQAESLSPQVSTPSNPENAVPVDEVV 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ID++++G+CT G+ ED A + +VPA++ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIRIVADIIEGEQLAPDTRMVVVPASRSVYKQMMNTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ F +AG S CG+C G
Sbjct: 348 ----MKTFVDAGA-IVQSAGCGSCFG 368
>gi|336477295|ref|YP_004616436.1| homoaconitate hydratase family protein [Methanosalsum zhilinae DSM
4017]
gi|335930676|gb|AEH61217.1| homoaconitate hydratase family protein [Methanosalsum zhilinae DSM
4017]
Length = 417
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 204/384 (53%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI + K ++S GD V VD+ D GP + +K AK DR +
Sbjct: 4 TISEKIIGEHAGK-EVSAGDIVVARVDVTAVQDGTGPLAVQQLRKIKLVEAKNPDRTILF 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + ++ + +ILR F + + + ++G +GVCH L E
Sbjct: 63 I--DHAAPSPNKDLSNAHNILRQFAKDTGVI----LSEVG--------EGVCHQRLV-ES 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++L+G DSHTCT+GA G F+TG+G+TD + GK L+VP T + + G+
Sbjct: 108 YVKPGDILIGADSHTCTSGALGAFSTGMGSTDVAIGIALGKTWLRVPETFKINVTGKFQK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL IIG I GATYK++EF G T+ ++M ER TL NM VEAG K G+V +D
Sbjct: 168 GVYAKDLILHIIGMIGADGATYKALEFSGETIRNMTMSERFTLTNMAVEAGAKTGLVESD 227
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +YL++ + P+ +DE A + D S +EP+++ PH+ DN ++
Sbjct: 228 EVTRRYLKEMGREDEFRPIKADEDAVYERIIDIDASAIEPVISAPHTVDNVKSIKDLTGT 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+V+IG+CT G+ +D AA V + + PA+++V++ K
Sbjct: 288 KVDQVFIGTCTNGRLDDLKIAANVLRGKQRHPDTRLIVTPASKQVYIQALE--------K 339
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
Q EAG A P CG C+G
Sbjct: 340 GYIQTLVEAGAAVMA-PGCGPCVG 362
>gi|412341597|ref|YP_006970352.1| 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica 253]
gi|408771431|emb|CCJ56232.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica 253]
Length = 420
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 178/328 (54%), Gaps = 19/328 (5%)
Query: 88 GDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNV 147
G+ V VD+ M HD GP +E G +WDR +IV++ DHY+ SD+ + R V
Sbjct: 23 GEIVTCKVDLAMFHDSSGPRRLQPMLEELGTG--LWDRSRIVLVMDHYVPESDDESRRIV 80
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
I RD+ EQ + + YD G+CH+ + + GH RPG +G DSH+ T
Sbjct: 81 RIARDWAREQALPHVYD------------SMGICHVVVPEHGHVRPGMFCVGGDSHSPTG 128
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG + G+G+T+ V+ +G++ ++VP TL G + ++AKD++L +IG +
Sbjct: 129 GAFGAYMFGVGSTEMLGVVTSGEIWMRVPDTLMMHWRGRLRPGVMAKDMMLHMIGLHGMN 188
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTS-LPYEP 326
G Y+++EF G V LSM+ERMTL NM E G + G++ D TT +YL + P
Sbjct: 189 GGRYQAVEFCGEAVRALSMQERMTLSNMSAELGAQAGLIAPDQTTARYLRQAGAPEPDTA 248
Query: 327 VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF 386
+ + + + FD L P VA PHSP N A + D + YIG+CTG K +D
Sbjct: 249 RWQSDPDAPAQWHEFDADSLPPYVAAPHSPANAAPVQAYADTAVQVAYIGACTGAKLDDL 308
Query: 387 LAAAKVFLASGKKVK--VPTFLVPATQK 412
AAA+V G++V V + PA+Q+
Sbjct: 309 RAAAQVL--RGRRVAPGVSLLVAPASQR 334
>gi|402572738|ref|YP_006622081.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus meridiei
DSM 13257]
gi|402253935|gb|AFQ44210.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus meridiei
DSM 13257]
Length = 428
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 200/394 (50%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKIFD--AHRVNMPFPDTHVLKLDRVFCHEITTPIAITDLMARGMD--RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGIKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++FVL+G +
Sbjct: 110 FVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGICAFHFPKTIKFVLNGSLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G +E +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVIEGMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL ++ L Y SD A++ Y +D+S LEP+V + PD
Sbjct: 230 MTTVEYLWEFIQDEFETKEDALLEYSKWTSDADAAYEKVYEYDVSTLEPMVTFGYKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+E KID+VYIGSCT G+ ED AA + V + PAT +Y+
Sbjct: 290 KPVKEMSHTKIDQVYIGSCTNGRIEDLRIAASIIKDKKISDDVRAIVSPATPA----IYS 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
L + + +IF++AG C T +P+CGACLG
Sbjct: 346 LALK----EGLIEIFQDAGFCVT--NPTCGACLG 373
>gi|333979108|ref|YP_004517053.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822589|gb|AEG15252.1| 3-isopropylmalate dehydratase large subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 429
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 197/383 (51%), Gaps = 24/383 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + + D V VD +M D P + F++ E +V+D +++
Sbjct: 15 TIIEKILSSHSGQEAYA-NDIVVARVDFVMGQDGTSPLAIRAFQEM--EGTRVFDPDRVA 71
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + +E + ++R F E+ I + YDI + GVCH + + G
Sbjct: 72 LVIDHSAPSPNEGVSALHQLMRRFAREKGI-HLYDIGE-----------GVCHQVVPESG 119
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD + +G++ KVP T +FV G +P
Sbjct: 120 RVGPGTLVIGADSHTCTYGALNAFSTGVGSTDLAGAMISGQMWFKVPETFKFVCHGTLPR 179
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG+++ GATY + E+ G + LSM+ R T+ NM +E G K G++ AD
Sbjct: 180 GVYAKDLILYLIGDVTADGATYMAAEYTGEAIANLSMDGRFTMANMAIEMGAKAGLMEAD 239
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF +L T + PV D A + +D+S LEP VA+PH DN E
Sbjct: 240 EKTFAWLARFTRRQFLPVSPDPDARYARIKEYDVSNLEPQVARPHRVDNVCPVAEVAGTP 299
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
I + IG+CT G+ ED AA++ V + PA++++++ +
Sbjct: 300 IQQAVIGTCTNGRLEDLRIAAQILAGRRIHRDVRLIVAPASRRIYLQAMQ--------EG 351
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
Q E+G +P CG C+G
Sbjct: 352 VIQALVESGAAV-VTPGCGPCVG 373
>gi|421078226|ref|ZP_15539185.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
JBW45]
gi|392523811|gb|EIW46978.1| 3-isopropylmalate dehydratase large subunit [Pelosinus fermentans
JBW45]
Length = 418
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 210/387 (54%), Gaps = 28/387 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MT+ EKI +RAS K + PG+ + VD+ M++D + IF+ + + KV+D +K
Sbjct: 2 GMTMGEKILARASGKDLVKPGEIITAKVDLCMSNDGTTHLNIDIFENQL-KAEKVFDPKK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
++ I DH + + + + +R F + +I ++ + GVCH +
Sbjct: 61 VIFIVDHNVPSESAKTAQVHKKMRIFAQKHDIPFY-------------EGTGVCH-QIMI 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E PG++++ DSHTC+ G G F TG+G TD V+ TG++ L VP TL+F ++G
Sbjct: 107 EDFVVPGQLVIAADSHTCSYGGLGAFGTGVGCTDFTSVMHTGEIWLMVPETLKFEIEGSF 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ A+DLIL+IIG+I GA Y+ MEF G V++ ++++R+ LCNM VEAG K G+V
Sbjct: 167 KAGVYARDLILKIIGDIGANGANYRIMEFGGPAVKKFTVDDRVVLCNMAVEAGAKTGLVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D Y + + SDE A + Y++++ +LEP++A PH D+ + +
Sbjct: 227 PDQIAIDYAKARGRHDMNLFTSDEDAVYEKTYQYNLDELEPMIAIPHCVDDVVGVTQIGE 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
VKID+ +IGSC G+ E+ AAA++ GKK+ V + PA++ V+++
Sbjct: 287 VKIDQGFIGSCNNGRIEELRAAAQIL--QGKKIDPYVKLLISPASKAVFLEALA------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF E+G +P+C C G
Sbjct: 339 --EGLIDIFVESGA-MVLNPNCSVCWG 362
>gi|365873268|ref|ZP_09412801.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thermanaerovibrio velox DSM
12556]
gi|363983355|gb|EHM09562.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Thermanaerovibrio velox DSM
12556]
Length = 426
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 191/350 (54%), Gaps = 18/350 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KI +RAS K +S GD VW N+D+ D GP F++ G++AKVWD +KI
Sbjct: 4 TMIQKIMARASGK-DVSVGDRVWCNIDLSTARDFGGPNCVLQFEEVTGKDAKVWDPDKIA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
D E+ + N I+R F +Q I +D+ G+ L + G
Sbjct: 63 FTFDLQAPAHSEKVSNNQKIIRQFAKKQGITKVFDVN-----------WGIGQHVLLENG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG+V+LGTDSH GA G FATG+GNTD G + +VP T++ G+
Sbjct: 112 LVKPGDVILGTDSHMNLLGAVGAFATGVGNTDIVASWIKGTLWFRVPETMKITATGKFQR 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +D + ++G + G +K++EF G +E+ S+ +R+TLC+MV E GK G++ +
Sbjct: 172 GVYMRDFLTHLVGTLGADGMFFKAVEFTGDAIEQSSLSDRITLCSMVTEMSGKVGLIMPN 231
Query: 310 GTTFKYLEDKTSLP----YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
G ++L ++ E + D A++ E RFD+S+LEPL + P +PDN RE
Sbjct: 232 GPVLEWLVERAGKEVLDRVEMIRPDGDAAYSEELRFDVSQLEPLASCPDAPDNVKKVREV 291
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKV 413
+ID+V+IGSC+ G+ ED AA +V A+G KV V + P+T++V
Sbjct: 292 AGERIDQVHIGSCSNGRFEDIAAAHEVLKAAGFKVSPDVRVIITPSTREV 341
>gi|345860941|ref|ZP_08813222.1| isopropylmalate/citramalate isomerase large subunit
[Desulfosporosinus sp. OT]
gi|344325941|gb|EGW37438.1| isopropylmalate/citramalate isomerase large subunit
[Desulfosporosinus sp. OT]
Length = 428
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 198/394 (50%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKIFD--AHRVNMPFPDTHVLKLDRVFCHEITTPIAITDLMARGMD--RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ +K F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGVKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++FVL+G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKFVLNGTLNP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G ++ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVIDAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D Y SDE AS+ Y +D++ LEP+V + PD
Sbjct: 230 MTTVEYLWDFIKDEFNTKEDAFKEYSKWISDEDASYEKVYEYDVTNLEPMVTFGYKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E KID+VYIGSCT G+ ED AA + V + PAT D+Y+
Sbjct: 290 KTVNEMSGTKIDQVYIGSCTNGRIEDLRIAANIIKDKKISDDVRAIVSPATP----DIYS 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + +IF+ AG C T +P+CGACLG
Sbjct: 346 MALK----EGLIEIFQNAGFCVT--NPTCGACLG 373
>gi|339499562|ref|YP_004697597.1| homoaconitate hydratase family protein [Spirochaeta caldaria DSM
7334]
gi|338833911|gb|AEJ19089.1| homoaconitate hydratase family protein [Spirochaeta caldaria DSM
7334]
Length = 436
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 201/405 (49%), Gaps = 45/405 (11%)
Query: 66 KNAMTLTEKIFSRASEKPQLSPGDNVWV-NVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
+ TL EKIF P WV +D + H++ P + + + +V+D
Sbjct: 5 QTGKTLAEKIFETHLVD---QPFGEAWVLRLDAVFCHEITTPVAINDLVSKGMD--RVFD 59
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
KI + DH D + ILRD+ IK F+DI GVCH
Sbjct: 60 PTKIKAVIDHVTPAKDSKTALQGKILRDWARRHGIKDFFDI----------GRNGVCHAL 109
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
++G RPG ++ DSHTCT GAFG FA G+G TD + G K P T+R L+
Sbjct: 110 FPEKGFVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFKPPLTMRINLE 169
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G + + AKD+IL +I +I V+GAT K MEF G V+ LSME RMTLCNM +EAGG +G
Sbjct: 170 GTLKKGVTAKDVILAVIAKIGVSGATDKIMEFRGPVVDALSMEGRMTLCNMAIEAGGTSG 229
Query: 305 VVPADGTTFKYL--------------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
V D TT +YL ++ Y+ +SDE A + S D S LEP+
Sbjct: 230 VCMPDMTTVEYLWPFIGPDGEGQFATKEAALAAYKAWWSDEDARYDSVINLDCSALEPVS 289
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVP 408
+ PD E KD ++D+VYIGSCT G+ ED AA V G+K+ V L P
Sbjct: 290 TIGYKPDQVKPIAELKDTRVDQVYIGSCTNGRIEDLREAAAVL--KGRKIADSVRGILSP 347
Query: 409 ATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
AT +V+ + QIF +AG C T +P+CGACLG
Sbjct: 348 ATPEVYAQALK--------EGLIQIFMDAGFCVT--NPTCGACLG 382
>gi|333998746|ref|YP_004531358.1| 3-isopropylmalate dehydratase large subunit 1 [Treponema primitia
ZAS-2]
gi|333739447|gb|AEF84937.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1) [Treponema
primitia ZAS-2]
Length = 430
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 204/401 (50%), Gaps = 45/401 (11%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
TL EKIF + +++P GD + +D + H++ P + + + +V+D KI
Sbjct: 4 TLAEKIFETHVADRPF---GDTWVLRLDRVFCHEITTPIAINDLVSKGMD--RVFDPSKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH D + LRD+ Q IK F+DI GVCH ++
Sbjct: 59 KVVIDHVSPAKDSKTADQGKTLRDWARRQKIKDFFDIGS----------NGVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P TLR L G++
Sbjct: 109 GFVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRKPETLRINLKGKLR 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KDLIL +I +I VAGAT K +EF G ++ +SME RMTLCNM VEAGG +GV
Sbjct: 169 PGVYPKDLILAVIAKIGVAGATDKVVEFRGPVIDAMSMEGRMTLCNMAVEAGGTSGVCMP 228
Query: 309 DGTTFKYL-------EDKTSLPYEPVY-------SDEKASFLSEYRFDISKLEPLVAKPH 354
D T YL DK+ E SD AS+ S D S LEPL +
Sbjct: 229 DQVTLDYLWPFIGPQGDKSYATKEEALKDFVKWQSDADASYSSIVELDCSSLEPLATVEY 288
Query: 355 SPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQK 412
PD RE K K+D+VYIGSCT G+ ED AA++ GKK+ + + PAT +
Sbjct: 289 KPDQVKTIRELKGQKVDQVYIGSCTNGRIEDLREAARII--KGKKIAPSIRAIVSPATTE 346
Query: 413 VWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
V+ T + ++F +AG C T +P+CGACLG
Sbjct: 347 VFSQALT--------EGLIRVFMDAGFCVT--NPTCGACLG 377
>gi|225175378|ref|ZP_03729373.1| homoaconitate hydratase family protein [Dethiobacter alkaliphilus
AHT 1]
gi|225169130|gb|EEG77929.1| homoaconitate hydratase family protein [Dethiobacter alkaliphilus
AHT 1]
Length = 428
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 201/394 (51%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF + + + D + +D + H++ P I +V+D KI
Sbjct: 4 TIAEKIFD--AHRVDMPFSDTHVLKLDRVFCHEITTP--IAITDLMARGMDRVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGIKDFFDI----------GRNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++FVL+G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHAPKTIKFVLNGALKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT K +EF G V+ +SME RMTLCNM +EAGG GV D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNKVIEFSGPVVDEMSMESRMTLCNMAIEAGGTCGVCYPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL +++ Y SD+ A++ Y +D+S+LEP+V PD
Sbjct: 230 MTTVEYLWEFIKDEFNSKEEALKEYSKWMSDDDATYEKVYEYDVSELEPMVTFGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
RE KID++YIGSCT G+ ED AA + V + PAT VY+
Sbjct: 290 KPVREMAGTKIDQIYIGSCTNGRIEDLRIAASILKDKKISDDVRGIVSPATPA----VYS 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + +IF+++G C T +P+CGACLG
Sbjct: 346 MALK----EGIIEIFQDSGFCVT--NPTCGACLG 373
>gi|118579063|ref|YP_900313.1| 3-isopropylmalate dehydratase large subunit [Pelobacter propionicus
DSM 2379]
gi|118580343|ref|YP_901593.1| 3-isopropylmalate dehydratase large subunit [Pelobacter propionicus
DSM 2379]
gi|118501773|gb|ABK98255.1| homoaconitate hydratase family protein [Pelobacter propionicus DSM
2379]
gi|118503053|gb|ABK99535.1| 3-isopropylmalate dehydratase, large subunit [Pelobacter
propionicus DSM 2379]
Length = 427
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 205/397 (51%), Gaps = 41/397 (10%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF S ++P PG V + +D+++ H++ P + + +V+D KI
Sbjct: 4 TIAEKIFESHLVDEP--FPGTKV-LRLDVVLCHEITTPIAIDDLVRR--NKDRVFDSTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + ILRD+ +I F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKILRDWARRHDIPDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA GIG TD + G + P T+RF + G++P
Sbjct: 109 GFIRPGYTVIMGDSHTCTHGAFGAFAAGIGTTDLEVGILKGVCAFRQPKTIRFNVIGQLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL IIG I V GAT + MEF G T+ ++M+ RM LCNM +EAGG +G+
Sbjct: 169 TGVYAKDVILHIIGRIGVNGATDRVMEFHGDTIAAMTMDSRMALCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D TT YL ++ Y SD AS+ D++ LEP V + PD
Sbjct: 229 DMTTVDYLWPFISDEFESKEAALAEYGKWCSDPDASYEQVIDIDVTNLEPTVTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
E K+D++Y+GSCT G+ ED AA + GKK+ V L PAT KV+ +
Sbjct: 289 VKPVTELAGTKVDQIYLGSCTNGRLEDLRIAAGIL--KGKKLAPHVRGILSPATPKVYQE 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF EAG C T +P+CGACLG
Sbjct: 347 ALK--------EGLMEIFMEAGFCIT--NPTCGACLG 373
>gi|170290585|ref|YP_001737401.1| 3-isopropylmalate dehydratase [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170174665|gb|ACB07718.1| 3-isopropylmalate dehydratase [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 413
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 225/395 (56%), Gaps = 33/395 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT++EKI S+ + + ++ PG+++ +VD++ HD P + + + E G R +
Sbjct: 1 MTMSEKILSKKAGR-RVYPGEHIVADVDLVYAHDGTAPLTIEMIE-ELGLREL---RSRA 55
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + A N +RDF ++ F D+G +G+CH + +
Sbjct: 56 IFTIDHASPPPNVDAAANHRRMRDFASRWGVRIF----DVG--------EGICHQVIPER 103
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G +P ++++G DSHT T GA G FATG+G+TDA + TGK+ LKVP ++ +DG +
Sbjct: 104 GLVKPWDLVIGADSHTVTLGALGAFATGVGSTDAAIAMLTGKIWLKVPESIAVKVDGTLK 163
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+++ AKD+IL++IG + GA YK++EF+G+ VE +S++ +M L NM VE G K ++P
Sbjct: 164 NHVTAKDVILEVIGRLGSDGANYKAVEFLGSAVEAMSLDSKMVLANMSVEMGAKVAMIPT 223
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
DG T ++L+++ +E ++ DE+A++ + Y F +++P V+ P+S D A E +
Sbjct: 224 DGRTSEWLKERVG-HFEGIWPDEEANYSAFYEFPAEEIKPNVSLPNSVDRVAPVEEVEGE 282
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
++D V+IGSC+GG+ EDFL A+++ K V VPA+++V M + SG
Sbjct: 283 EVDLVFIGSCSGGRFEDFLLASRIMRGRKLKEGVRCITVPASKEVQMKLID-----SG-- 335
Query: 429 TCSQIFEEAGCDTPASPSCGACLG------GPKDT 457
+ E GC T P+CG C+G GP +T
Sbjct: 336 -LMRSLLEFGC-TVGPPTCGPCIGAHMGLAGPGET 368
>gi|345861115|ref|ZP_08813388.1| isopropylmalate/citramalate isomerase large subunit
[Desulfosporosinus sp. OT]
gi|344325789|gb|EGW37294.1| isopropylmalate/citramalate isomerase large subunit
[Desulfosporosinus sp. OT]
Length = 416
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 205/388 (52%), Gaps = 29/388 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI + + + PG V VN+D +M +D S +F+KE + +V+DREK+
Sbjct: 1 MNAIEKIIAAHAGLKTVKPGQIVDVNLDYVMANDATTTLSIDVFQKEL-KGERVFDREKV 59
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V++ DHY A +R F +Q + Y YD GVCH L E
Sbjct: 60 VLVMDHYTPCCSVDAAETHKKMRQFGRDQELSYIYD------------GVGVCH-QLMLE 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
H +PG+ ++G DSHTCT GA G +TG+G+TD GKV +KVP ++ + G+ P
Sbjct: 107 HHAKPGDFIIGADSHTCTYGAIGALSTGMGSTDVAVAWMEGKVWIKVPFAIKIRVSGKWP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ +KDL L++IG+++ GATYK++ F G + +++ ER+TLCNM +EAG K +
Sbjct: 167 KGVYSKDLALKVIGDLTAKGATYKALVFEGEAIRDMTVSERVTLCNMGIEAGAKFAYMQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYS-DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D +++D Y+PV D+ AS+ +D+ LEP +A P+S D + +
Sbjct: 227 DEKVKTFMKD-MGREYDPVIEDDDDASYEWILTYDVENLEPQIAYPNSVDQVKSLSDFEG 285
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
++ID V++G+CT G+ ED AA + GKK+ KV + P + V+M + G+
Sbjct: 286 LEIDEVFLGACTNGRFEDLEIAAAIL--KGKKISDKVRMLVTPVSNAVYMKAMERGLIGT 343
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
F E+G + P C AC GG
Sbjct: 344 --------FIESGA-MVSPPGCSACFGG 362
>gi|358064132|ref|ZP_09150717.1| hypothetical protein HMPREF9473_02780 [Clostridium hathewayi
WAL-18680]
gi|356697648|gb|EHI59223.1| hypothetical protein HMPREF9473_02780 [Clostridium hathewayi
WAL-18680]
Length = 417
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 198/370 (53%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD VN+D LM++D + +++ + + ++ D K+V I DH + + +
Sbjct: 19 VKPGDIHTVNLDRLMSNDGTTHLTIDMYRNQL-KRPRIADASKLVFIVDHNVPADNPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E I ++ + KGVCH + E + RPGE++ G DSHT
Sbjct: 78 ASQKKMRDFARENGIDFW-------------EGKGVCH-QIMMEHYVRPGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
CT GA G F TG+G TD + + TG + VP T++F L G++ + +DL+L IIG++
Sbjct: 124 CTYGALGAFGTGVGCTDYLYGMVTGTSWVLVPETVKFNLVGKLRPGVYPRDLMLTIIGQV 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G V+ LS+ +RM LCN+ VEAG K G+V AD +YL++ P
Sbjct: 184 GANGCNYQVMEFTGEGVKTLSVNDRMVLCNLAVEAGAKTGIVEADEIALEYLKEHGRTPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SDE A ++ EY FD+SK+EP+ A+P D+ A E + ID ++GSC G+ +
Sbjct: 244 AVYHSDEDAVYVREYTFDLSKIEPVAARPDFVDDVVPASEVAGIAIDEAFLGSCNNGRID 303
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D A V GKKV V +VPA+ DVY + + +IF EAG
Sbjct: 304 DLRVGAAVI--KGKKVAEHVRFLVVPASN----DVYQQALK----EGLIEIFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+ +C C G
Sbjct: 353 MNANCSVCWG 362
>gi|253700129|ref|YP_003021318.1| 3-isopropylmalate dehydratase large subunit [Geobacter sp. M21]
gi|251774979|gb|ACT17560.1| homoaconitate hydratase family protein [Geobacter sp. M21]
Length = 427
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 207/397 (52%), Gaps = 39/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT +KIF+ A + G V +++D++M H++ P + G++ +V+D KI
Sbjct: 3 MTTAQKIFA-AHLVDEPFAGTKV-LSIDVVMCHEITTPIAIADLMAR-GKD-RVFDPSKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + +LRD+ +IK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKMLRDWARRHDIKDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R L+G +P
Sbjct: 109 GFIRPGNTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKTIRVNLNGTLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL++IG + V GAT + +EF G V R++ME RMTLCNM +EAGG +G+
Sbjct: 169 KGVFAKDAILRVIGHLGVNGATDRVIEFGGPVVARMTMESRMTLCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL +++ Y SD A++ D+S L PL + PD
Sbjct: 229 DQVTVDYLWPFISGSFGSKEEALAAYSVWCSDADAAYEQVIDLDLSDLAPLCTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
E ++D+VY+GSCT G+ ED AA++ GKK+ V L PAT +++ D
Sbjct: 289 VKSVTEMAGTQVDQVYLGSCTNGRLEDLRVAAQIL--KGKKIASHVRAILSPATPQIYKD 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ QIF +AG C T +P+CGACLG
Sbjct: 347 AVA--------EGLIQIFMDAGFCVT--NPTCGACLG 373
>gi|448464175|ref|ZP_21598398.1| 3-isopropylmalate dehydratase [Halorubrum kocurii JCM 14978]
gi|445815962|gb|EMA65879.1| 3-isopropylmalate dehydratase [Halorubrum kocurii JCM 14978]
Length = 437
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 215/390 (55%), Gaps = 33/390 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EK+ S S + GD V VD++MTHDV GP +F +F+ G++ ++ D + V
Sbjct: 5 TISEKLLSEKS-GDDVRAGDYVEAAVDVMMTHDVTGPLTFEVFEDVTGDDPELVDPDNTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH+ +A N +I+R+F E + YD+ D G+CH L +EG
Sbjct: 64 ITIDHHAPADGVKAANNHNIVREFADEYGAQQ-YDVGD-----------GICHQVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF ++G++PD
Sbjct: 112 FVSPGDLVIGADSHSTTFGGVGGFGTGVGSTDLGTTLATGELWFRVPETLRFEVEGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TYK+ E+ G+ VE L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILKFIGDVGFDGCTYKTAEYGGSAVEALPIHERLVLSNMAIEMGGKAGIVAPD 231
Query: 310 GTTFKYLEDKT-SLPYEPVYS--DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T +LE +T P P Y+ D+ A + + + + L P V+ P +P+N E
Sbjct: 232 ERTVDFLEAQTGERPAIPAYTQPDDDADYEAVHTYQAESLSPQVSTPSNPENAVPVDEVV 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWMDVYTLPV 422
+ID++++G+CT G+ ED A V LA G ++ V VPA++ V+ + V
Sbjct: 292 GTEIDQLFVGTCTNGRYEDIRIVADVIEGERLAPGTRMVV----VPASRSVYKQMMDTGV 347
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ F +AG S CG+C G
Sbjct: 348 --------METFVDAGA-IVQSAGCGSCFG 368
>gi|33598165|ref|NP_885808.1| 3-isopropylmalate dehydratase large subunit [Bordetella
parapertussis 12822]
gi|33603059|ref|NP_890619.1| 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica RB50]
gi|410421550|ref|YP_006901999.1| 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica MO149]
gi|427818743|ref|ZP_18985806.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica D445]
gi|33566723|emb|CAE38934.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
parapertussis]
gi|33568690|emb|CAE34448.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica RB50]
gi|408448845|emb|CCJ60530.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica MO149]
gi|410569743|emb|CCN17858.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica D445]
Length = 420
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 178/328 (54%), Gaps = 19/328 (5%)
Query: 88 GDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNV 147
G+ V VD+ M HD GP +E G +WDR +IV++ DHY+ SD+ + R V
Sbjct: 23 GEIVTCKVDLAMFHDSSGPRRLQPMLEELGTG--LWDRSRIVLVMDHYVPESDDESRRIV 80
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
I RD+ EQ + + YD G+CH+ + + GH RPG +G DSH+ T
Sbjct: 81 RIARDWAREQALPHVYD------------SLGICHVVVPEHGHVRPGMFCVGGDSHSPTG 128
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG + G+G+T+ V+ +G++ ++VP TL G + ++AKD++L +IG +
Sbjct: 129 GAFGAYMFGVGSTEMLGVVSSGEIWMRVPDTLMMHWRGRLRPGVMAKDMMLHMIGLHGMN 188
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTS-LPYEP 326
G Y+++EF G V LSM+ERMTL NM E G + G++ D TT +YL + P
Sbjct: 189 GGRYQAVEFCGEAVRALSMQERMTLSNMSAELGAQAGLIAPDRTTAQYLRQAGAPEPDTA 248
Query: 327 VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF 386
+ + + + +D L P VA PHSP N A + D + YIG+CTG K +D
Sbjct: 249 RWQSDPDAPAQWHEYDADSLPPYVAAPHSPANAAPVQAYADTAVQVAYIGACTGAKLDDL 308
Query: 387 LAAAKVFLASGKKVK--VPTFLVPATQK 412
AAA+V G++V V + PA+Q+
Sbjct: 309 RAAAQVL--RGRRVAPGVSLLVAPASQR 334
>gi|312880612|ref|ZP_07740412.1| homoaconitate hydratase family protein [Aminomonas paucivorans DSM
12260]
gi|310783903|gb|EFQ24301.1| homoaconitate hydratase family protein [Aminomonas paucivorans DSM
12260]
Length = 426
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 204/394 (51%), Gaps = 41/394 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KI RAS K ++ GD VW NVD+ D GP F++ + KVWD +KI
Sbjct: 4 TMIQKIMQRASGK-EVQIGDRVWCNVDLSTARDFGGPNCVLQFEEVTDKQGKVWDPKKIA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
D E+ + N I+R+F +Q I +DI G+ L + G
Sbjct: 63 FTFDLQAPAHSEKVSNNQKIIREFSRKQGIDKVFDIN-----------WGIGQHVLLENG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD--AGFVLGTGKVLLKVPPTLRFVLDGEM 247
H +PG+V+LGTDSH GA G FATG+GNTD A ++LGT + +VP T++ G+
Sbjct: 112 HVKPGDVILGTDSHMNLLGAVGAFATGVGNTDIVASWILGT--LWFRVPETMKITATGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ +DL+ ++G + G +K++EF G TVE ++ +R+TLC+MV E GK G++
Sbjct: 170 AKGVYMRDLLTHLVGTLGADGMFFKAVEFYGDTVENSTLADRITLCSMVTEMSGKVGLIM 229
Query: 308 ADGTTFKYLE----DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
G +L D+ + + +D A + E D+SKLEPL + P +PDN R
Sbjct: 230 PSGPVLDWLAARAGDEVRQRVKDLAADADAPYCQEVSVDVSKLEPLASCPDAPDNVKKVR 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLP 421
E KI +V+IGSC+ G+ ED AA +V A G +V +V T + P+T++V
Sbjct: 290 EVAGEKIQQVHIGSCSNGRFEDITAAFEVLQAGGFQVSPEVRTIITPSTREVM------- 342
Query: 422 VPGSGGKTCS-----QIFEEAGCDTPASPSCGAC 450
K C+ Q F EAG +P+C C
Sbjct: 343 ------KQCAEAGYIQKFLEAGV-VFTNPTCSLC 369
>gi|238917291|ref|YP_002930808.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Eubacterium eligens ATCC 27750]
gi|238872651|gb|ACR72361.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Eubacterium eligens ATCC 27750]
Length = 413
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 32/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREK 127
T+ EKI + + ++ PGD V VNVD +M HD+ P K++F E K+WD +K
Sbjct: 4 TIIEKIIGKNIGR-EVKPGDIVTVNVDRVMIHDIFIP----FVKEKFEEMGFTKIWDPDK 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
V+I DH + S R+ I +F E +K + G+CH + +
Sbjct: 59 AVLIYDHLVPASQVDDTRHFRIGNEFVEEYGMKNIHR------------SDGICHQLMTE 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G+ +PG++ GTDSHT T G G F++GIG T+ VLGTGK+ +KVP T++ ++G++
Sbjct: 107 AGYVKPGDIAFGTDSHTTTYGCVGAFSSGIGYTEMASVLGTGKMWVKVPQTIKVTVNGKL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P+ + +KD+IL++IG++ GATY+++EF G+T++ +S+ RMT+ NM +EAG K +
Sbjct: 167 PENVRSKDIILRLIGDLGADGATYQALEFTGSTIDEMSVASRMTMSNMAIEAGAKCALFT 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +Y + + + + D A + E ++ L P++A P DN E
Sbjct: 227 PDEKTAEYCNVELTDELKDLKGDADAVYAREITYNAEDLVPVIACPSQVDNIKPVTELAG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
+D+V+IGSCT G+ ED AA + GKKV V + PA++K++ +
Sbjct: 287 TAVDQVFIGSCTNGRLEDLQCAAAIL--KGKKVAPFVKLIVTPASRKIYKEAL------- 337
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
+ EAG P CG C G
Sbjct: 338 -ADGTLETLVEAGA-IVTHPGCGLCCG 362
>gi|337279484|ref|YP_004618956.1| alpha-IPM isomerase [Ramlibacter tataouinensis TTB310]
gi|334730561|gb|AEG92937.1| Alpha-IPM isomerase [Ramlibacter tataouinensis TTB310]
Length = 420
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL K+ +RA+ + + PG+ V VD+ M HD GP +E G A +WD+ K
Sbjct: 3 AATLACKLVARAAGREHVRPGEIVTCGVDLAMFHDSSGPRRLQPMLEELG--AAIWDKSK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V++ DHY+ E A R V I RD+ +Q + + YD G+CH+ + Q
Sbjct: 61 VVLVMDHYVPERSEDARRIVRIARDWARDQALPHVYD------------SMGICHVVVPQ 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
GH RPG +G DSH+ T GAFG + GIG T+ V+ TG++ ++ P T+R +G +
Sbjct: 109 HGHIRPGMFCVGGDSHSPTGGAFGAYMFGIGATEMLGVVATGQIWVQAPRTIRMRWEGRL 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD++L +I + G Y+++E+ G V L M ERMTL NM E G + G+V
Sbjct: 169 AAGVTAKDMMLALIARFGMNGGAYQAVEYAGGAVRALGMNERMTLSNMSAELGAQVGLVA 228
Query: 308 ADGTTFKYLEDKTS--LPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T +L + + P +SD+ S E+ FD L P VA P+SP N E
Sbjct: 229 PDEVTRDWLAAHGAPGVDIAPWFSDD-GSADEEHVFDAGALAPQVAAPYSPANGHGVGEL 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
+ID YIG+CTG K +D AA V V + PA+
Sbjct: 288 AGTRIDAAYIGACTGAKLDDLRFAAHVLRRRRVAPGVRLMVAPAS 332
>gi|15669192|ref|NP_247997.1| 3-isopropylmalate dehydratase LeuC [Methanocaldococcus jannaschii
DSM 2661]
gi|3122347|sp|Q58409.1|HACA_METJA RecName: Full=Homoaconitase large subunit; Short=HACN; AltName:
Full=(R)-homocitrate dehydratase; AltName:
Full=Homoaconitate hydratase; AltName: Full=Methanogen
homoaconitase
gi|1591664|gb|AAB99007.1| 3-isopropylmalate dehydratase (leuC) [Methanocaldococcus jannaschii
DSM 2661]
Length = 420
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 209/401 (52%), Gaps = 35/401 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI S+ ++ GD++ V VD+ MTHD P ++ K+ + VW+ +KI
Sbjct: 1 MTLVEKILSKKV-GYEVCAGDSIEVEVDLAMTHDGTTPLAYKALKEM---SDSVWNPDKI 56
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+ DH + + +A + +F IK F+ +G+CH LA E
Sbjct: 57 VVAFDHNVPPNTVKAAEMQKLALEFVKRFGIKNFH-----------KGGEGICHQILA-E 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ P + G DSHTCT GAFG FATG G TD ++ TG+ +KVP T+R + G+
Sbjct: 105 NYVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVPKTIRVDIVGKNE 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD++L++ EI GATY ++E+ G V+ + M+ R+TLCNM +E GGK GV+ A
Sbjct: 165 N-VSAKDIVLRVCKEIGRRGATYMAIEYGGEVVKNMDMDGRLTLCNMAIEMGGKTGVIEA 223
Query: 309 DGTTFKYLEDKTSLPYEPV---------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
D T+ YL+ + L E + + ++A++ E DI+ +E VA PH PDN
Sbjct: 224 DEITYDYLKKERGLSDEDIAKLKKERITVNRDEANYYKEIEIDITDMEEQVAVPHHPDNV 283
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ + +I++V+IGSCT G+ D AAK V ++PA++KV++
Sbjct: 284 KPISDVEGTEINQVFIGSCTNGRLSDLREAAKYLKGREVHKDVKLIVIPASKKVFLQALK 343
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+ IF +AG +P CG CLG + A
Sbjct: 344 EGII--------DIFVKAGA-MICTPGCGPCLGAHQGVLAE 375
>gi|365170462|ref|ZP_09361076.1| homoaconitate hydratase [Synergistes sp. 3_1_syn1]
gi|363618070|gb|EHL69428.1| homoaconitate hydratase [Synergistes sp. 3_1_syn1]
Length = 426
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 191/350 (54%), Gaps = 22/350 (6%)
Query: 74 KIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPD 133
KI RAS P + GD VW N+D D G F+KE G++AKVWD +K+ D
Sbjct: 8 KIMERASGHP-VKVGDRVWCNIDWATCRDFGGANVVLQFEKEMGKDAKVWDPDKLAFTFD 66
Query: 134 HYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRP 193
E+ N I+R+FC +Q + +DI G+ + + G +P
Sbjct: 67 LQAPAHSEKVATNQKIIREFCKKQGVTRLFDIN-----------HGIGQHVMLEAGMIKP 115
Query: 194 GEVLLGTDSHTCTAGAFGQFATGIGNTD--AGFVLGTGKVLLKVPPTLRFVLDGEMPDYL 251
G+V+LGTDSH GA G FATG+GN+D A ++ GT +VP T++ + G+ +
Sbjct: 116 GDVVLGTDSHMNLLGAVGSFATGVGNSDIAASYIAGTN--WFRVPETMKIEVTGKFKKGV 173
Query: 252 LAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGT 311
+DL+ I+G++ G + ++EF G T+E +++ER+TLC+MV E GK ++ +G
Sbjct: 174 CMRDLLTHIVGDLGAGGMDFLAVEFTGETIENATLDERITLCSMVTEMSGKVPLIMPNGD 233
Query: 312 TFKYLEDK----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
K+L ++ + E + +D A + R+D++ LEPL + P +PDN RE
Sbjct: 234 VLKWLVERAGPEVAKLAEELKADPDAEYCKVIRYDVTDLEPLASCPDAPDNVKPVREIAG 293
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWM 415
+D+V+IGSC+ G+ ED AA +V +A G KV KV T + P+T ++ +
Sbjct: 294 TVVDQVHIGSCSNGRYEDIKAAHEVLMAGGGKVSPKVRTIITPSTTEIQL 343
>gi|197119110|ref|YP_002139537.1| 3-isopropylmalate dehydratase large subunit [Geobacter bemidjiensis
Bem]
gi|226735970|sp|B5EHU2.1|LEUC_GEOBB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|197088470|gb|ACH39741.1| isopropylmalate/citramalate isomerase, large subunit [Geobacter
bemidjiensis Bem]
Length = 427
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 207/397 (52%), Gaps = 39/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT +KIFS A + G V +++D++M H++ P + G++ +V+D KI
Sbjct: 3 MTTAQKIFS-AHLVDEPFAGTKV-LSIDVVMCHEITTPIAIADLMAR-GKD-RVFDPTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + +LRD+ +IK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKMLRDWARRHDIKDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R L+G +P
Sbjct: 109 GFIRPGNTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKTIRVNLNGTLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL++IG + V GAT + +EF G V +++ME RMTLCNM +EAGG +G+
Sbjct: 169 KGVFAKDAILRVIGHLGVNGATDRVIEFGGPVVAQMTMESRMTLCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL +++ Y SD A++ D+S L PL + PD
Sbjct: 229 DQVTVDYLWPFISGSFGSKEEALAAYSVWCSDADAAYEQVIDLDLSDLAPLCTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
E ++D+VY+GSCT G+ ED AA++ GKK+ V L PAT +++ D
Sbjct: 289 VKSVTEMAGTQVDQVYLGSCTNGRLEDLRVAAQIL--KGKKIASHVRAILSPATPQIYKD 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ QIF +AG C T +P+CGACLG
Sbjct: 347 AVA--------EGLIQIFMDAGFCVT--NPTCGACLG 373
>gi|339321376|ref|YP_004680270.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus necator
N-1]
gi|338167984|gb|AEI79038.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus necator
N-1]
Length = 428
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 195/391 (49%), Gaps = 33/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RA+ G V VD+ M+HD GP +E G VWD + V
Sbjct: 7 TLAQKLVARAAGLAHAEIGTVVICRVDLAMSHDSSGPRRVAPLLQELGTG--VWDPSRYV 64
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH++ D +A + RD+ + + D +G+CH+ L + G
Sbjct: 65 VVTDHFVPGGDAQAESILRFTRDWTRQSGAHFI-------------DAEGICHVVLPERG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++G DSH+ T GAFG + G+G T+ VL TG++ L+VP T+R DG++
Sbjct: 112 HVLPGRLIVGGDSHSPTGGAFGAYMFGVGATEMAGVLATGEIWLRVPHTIRLQWDGQLAP 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + + G Y+++E+ G+ V L M+ERMTL NM E G + G+V D
Sbjct: 172 GVCAKDMMLFLCATLGMGGGRYEALEYTGSAVAALPMQERMTLANMSAELGAQTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
T +L + +P + + +D A L+ +RFD + L P VA PHSP N A
Sbjct: 232 AVTLGWLAEA-GVPAQTLAAIDLAHWRTDPDAPVLATHRFDAAALVPQVAAPHSPANSAP 290
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
+ + Y+G+CTG K ED AA+V V + PA+++ D
Sbjct: 291 VGQAAGEPVQIAYLGACTGAKLEDLRMAARVLRGRHVAAGVTLQVAPASRR---DQLLAE 347
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G+ G I +AG T +CGAC G
Sbjct: 348 QEGTLG-----ILTDAGA-TLLPNACGACAG 372
>gi|225028799|ref|ZP_03717991.1| hypothetical protein EUBHAL_03078 [Eubacterium hallii DSM 3353]
gi|224953883|gb|EEG35092.1| 3-isopropylmalate dehydratase, large subunit [Eubacterium hallii
DSM 3353]
Length = 412
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 34/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI + + +++PG V VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 4 TLIEKIIEKNTGLSKVTPGQIVTVNVDRVMIHDIFIP--FVADKFEEMGFTKLWDPDKVV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + TS R+ I F + + + + G+CH + + G
Sbjct: 62 LIYDHLVPTSAVEDVRHFKIGDAFADKYGLTHVHR------------RDGICHQLMTEAG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG++ ++VP T++ V++G +P
Sbjct: 110 YAKPGNIVFGTDSHTTTYGCVGCFSSGIGYTEMASILGTGEMWIRVPETIKVVINGTLPA 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL++IG++ GATYK++E G+ V+ +S+ RMT+ NM +EAG K + D
Sbjct: 170 NVTAKDVILRLIGDLRADGATYKALEITGSAVDAMSVASRMTISNMAIEAGAKCCLFRPD 229
Query: 310 GTTFKY----LEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
T +Y LED L Y DE AS+ + +L P+ A P DN E
Sbjct: 230 EKTCEYSEVNLEDVDWL-----YGDEDASYCRVMTYQAEELVPVCACPSQVDNIHPVSEL 284
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ID+V+IGSCT G+ ED AAK+ GK V T + PA++K++++ +
Sbjct: 285 VGTEIDQVFIGSCTNGRLEDLARAAKIL--EGKTVACRTIVTPASRKIYIEAVKAGYMET 342
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
K + I + P CG C G
Sbjct: 343 LAKAGAIITQ---------PGCGLCCG 360
>gi|291550798|emb|CBL27060.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus torques
L2-14]
Length = 414
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 205/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD M HD+ P F K E K+ D +K+V
Sbjct: 4 TIIEKII-RHNTGKVVKPGDIVTVNVDRCMIHDIFIP--FVADKFEEMGFTKLHDPDKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S + R+ +F + + + + G+CH + + G
Sbjct: 61 LIYDHLVPASQQDDTRHFHKGDEFVEKYGLTHVHR------------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DGE+P+
Sbjct: 109 YVKPGDIAFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIDGELPE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+T+E +S+ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDIILRLIGDLRADGATYRALEFSGSTIENMSVASRMTMANMAIEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E + + + + DE A ++ + P++A P D E + +
Sbjct: 229 EKTAEYCEIELNDYQKSLVGDEDAVYMKTMTYKAEDFIPVMACPSQVDKIRDVSELEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++
Sbjct: 289 IDQVFIGSCTNGRLEDLRAAAEVL--KGKKVADFVKLIVTPASRKIYRQAL--------A 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
I EAG P CG C G
Sbjct: 339 DGTLDILAEAGA-IITHPGCGLCCG 362
>gi|225028797|ref|ZP_03717989.1| hypothetical protein EUBHAL_03076 [Eubacterium hallii DSM 3353]
gi|224953881|gb|EEG35090.1| 3-isopropylmalate dehydratase large subunit [Eubacterium hallii DSM
3353]
Length = 417
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 195/352 (55%), Gaps = 21/352 (5%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
MTL EKI +RA+ + P D V +D +M++D + ++ + +N K+ D++K
Sbjct: 2 GMTLGEKIIARAAGVDFVKPNDIHTVTLDRMMSNDGTTHLTVDMYHNKL-KNPKIADKDK 60
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+V I DH + + + +RDF +E +IK + + +GVCH + +
Sbjct: 61 VVFIMDHNVPAENPKTAEAHKKMRDFAIENDIKLY-------------EGQGVCHQIMME 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+ C PGE++ G DSHT + GA G F TG+G TD + + TG + VP T+RF L G++
Sbjct: 108 DYVC-PGELIFGADSHTTSYGALGAFGTGVGCTDFLYAMTTGTSWVMVPETIRFNLHGKL 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ + +DLIL IIG+I GA YK MEF G LS+++RM LCN+ VEAG K G+V
Sbjct: 167 REGVYPRDLILTIIGDIGANGANYKIMEFAGDGAHNLSVDDRMVLCNLTVEAGAKAGIVE 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK- 366
D +Y + SDE A F Y +D+SK+EP+V +P DN AL ++ K
Sbjct: 227 PDEKVVEYCKAHGREAVHMFKSDEDAHFCEVYDYDLSKIEPVVVRPDFVDNFALLKDVKK 286
Query: 367 -DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWM 415
+ ID ++GSC G+ +D AA++ GK+V KV + PA++ V++
Sbjct: 287 EKIAIDEAFLGSCNNGRIDDLRVAAEI--VKGKQVDPKVRFIVAPASKAVYI 336
>gi|427816074|ref|ZP_18983138.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica 1289]
gi|410567074|emb|CCN24644.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
bronchiseptica 1289]
Length = 420
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 178/328 (54%), Gaps = 19/328 (5%)
Query: 88 GDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNV 147
G+ V VD+ M HD GP +E G +WDR +IV++ DHY+ SD+ + R V
Sbjct: 23 GEIVTCKVDLAMFHDSSGPRRLQPMLEELGTG--LWDRSRIVLVMDHYVPESDDESRRIV 80
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
I RD+ EQ + + YD G+CH+ + + GH RPG +G DSH+ T
Sbjct: 81 RIARDWAREQALPHVYD------------SLGICHVVVPEHGHVRPGMFCVGGDSHSPTG 128
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG + G+G+T+ V+ +G++ ++VP TL G + ++AKD++L +IG +
Sbjct: 129 GAFGAYMFGVGSTEMLGVVSSGEIWMRVPDTLMMHWRGRLRPGVMAKDMMLHMIGLHGMN 188
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTS-LPYEP 326
G Y+++EF G V LSM+ERMTL NM E G + G++ D TT +YL + P
Sbjct: 189 GGRYQAVEFCGEAVRALSMQERMTLSNMSAELGAQAGLIAPDRTTAQYLRQAGAPEPDTA 248
Query: 327 VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF 386
+ + + + +D L P VA PHSP N A + D + +IG+CTG K +D
Sbjct: 249 RWQSDPDAPAQWHEYDADSLPPYVAAPHSPANAAPVQAYADTAVQVAHIGACTGAKLDDL 308
Query: 387 LAAAKVFLASGKKVK--VPTFLVPATQK 412
AAA+V G++V V + PA+Q+
Sbjct: 309 RAAAQVL--RGRRVAPGVSLLVAPASQR 334
>gi|404496128|ref|YP_006720234.1| 3-isopropylmalate dehydratase large subunit [Geobacter
metallireducens GS-15]
gi|418065449|ref|ZP_12702822.1| homoaconitate hydratase family protein [Geobacter metallireducens
RCH3]
gi|123572197|sp|Q39W70.1|LEUC_GEOMG RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|78193737|gb|ABB31504.1| isopropylmalate/citramalate isomerase, large subunit [Geobacter
metallireducens GS-15]
gi|373562189|gb|EHP88406.1| homoaconitate hydratase family protein [Geobacter metallireducens
RCH3]
Length = 427
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 205/396 (51%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EKIF+ S G V + +D++M H++ P + G++ +V+D KI
Sbjct: 4 TTAEKIFASHLVDEPFS-GTKV-LRLDVVMCHEITTPIAIADLMAR-GKD-RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + D + +LRD+ IK F+D+ + GVCH ++G
Sbjct: 60 AVIDHVTPSKDSKTATQAKMLRDWARRHAIKDFFDV----------GHNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ RPG ++ DSHTCT GAFG FA G+G TD + G + P ++R L+G +P
Sbjct: 110 YIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKSIRINLNGTLPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +IG++ V GAT + MEF G V+ ++ME RMTLCNM +EAGG +G+ D
Sbjct: 170 GVYAKDVILYVIGQLGVNGATDRVMEFRGPVVDAMTMESRMTLCNMAIEAGGTSGICMPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T +YL ++ + SD+ A + FD+S LEP+V + PD
Sbjct: 230 MVTVEYLWPFIENEYPSKEAALAEFSTWRSDDDAVYERVLDFDVSVLEPIVTFGYKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT K++ D
Sbjct: 290 KPISEIAGSPVDQVYLGSCTNGRLEDLRIAARIL--KGKKIAPSVRGILSPATPKIYKDA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ IF EAG C T +P+CGACLG
Sbjct: 348 M--------AEGLIDIFMEAGFCVT--NPTCGACLG 373
>gi|94264600|ref|ZP_01288384.1| Cis-homoaconitase:3-isopropylmalate dehydratase, prokaryotic [delta
proteobacterium MLMS-1]
gi|93454954|gb|EAT05191.1| Cis-homoaconitase:3-isopropylmalate dehydratase, prokaryotic [delta
proteobacterium MLMS-1]
Length = 428
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 203/396 (51%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF+ A + +P +N +++D++M H++ P I E +V+D +KI
Sbjct: 4 TIVEKIFA-AHRRDNPTP-ENTILDLDVVMCHEITTP--IAITDLEARGMDRVFDPDKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH D + ILRD+ ++ F+DI + GVCH ++G
Sbjct: 60 VVIDHVTPAKDSKTATQGKILRDWARRHQLRDFFDI----------GHNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G ++P T+R + G +
Sbjct: 110 FIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFRLPKTIRVEITGTLAA 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+II E++V GAT + +EF G V +SME RMTLCNM VEAG GV D
Sbjct: 170 GVYAKDVILKIIKELTVNGATDRVLEFTGPVVAAMSMESRMTLCNMAVEAGATCGVCLPD 229
Query: 310 GTTFKYLEDKTSLPYEPV----------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL YE + +SD A + + FDIS L P PD
Sbjct: 230 RTTAEYLWPFIQDQYESIEAAVTGFTRWHSDPDALYEQQLHFDISGLTPQATYGFKPDEV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
+ +D++YIGSCT G+ ED AA++ G+K+ +V L PAT KV
Sbjct: 290 KDITAMEGTPVDQIYIGSCTNGRIEDLREAARIL--KGRKISEQVRGILAPATPKVAAQA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF EAG C T +P+CGACLG
Sbjct: 348 LE--------EGILKIFMEAGFCVT--NPTCGACLG 373
>gi|359795605|ref|ZP_09298222.1| 3-isopropylmalate dehydratase large subunit [Achromobacter
arsenitoxydans SY8]
gi|359366434|gb|EHK68114.1| 3-isopropylmalate dehydratase large subunit [Achromobacter
arsenitoxydans SY8]
Length = 422
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 201/391 (51%), Gaps = 37/391 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ + A + ++ G+ V VD+ M HD GP +E G A +WD K+V
Sbjct: 6 TLAQKLIAAACGREAVAEGEIVTCAVDLAMFHDSSGPRRLQPMLQELG--ATLWDPSKVV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DHY+ SD+ + R V I RD+ +Q + YD G+CH+ + Q G
Sbjct: 64 LVIDHYVPESDDESRRIVRIARDWASDQQLPNVYD------------SVGICHVVVPQHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG +G DSH+ T GAFG + GIG+T+ V TG++ +KVP TL G + D
Sbjct: 112 HIRPGMFCVGGDSHSPTGGAFGAYMFGIGSTEMLGVAVTGQIWVKVPKTLMMRWRGRLAD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L +IG + G Y+++EF G V LSM+ERMTL NM E G + G++ D
Sbjct: 172 GVTAKDMMLHMIGRYGMNGGRYQAVEFCGEAVRALSMQERMTLSNMSAELGSQVGLIAPD 231
Query: 310 GTTFKYLED---KTSLPYEPVYSDEKASFLSEYR-FDISKLEPLVAKPHSPDNRALAREC 365
TT YL L D A +E+ FD + L P VA PHSP N +
Sbjct: 232 ETTAAYLRQAGVAAELDLARWQGDPDAD--AEWHDFDAAALAPQVAAPHSPANARDVDQY 289
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWMDVYTLP 421
+DV + YIG+CTG K ED AAA V LA G ++ V PA+++ D
Sbjct: 290 RDVPVQVAYIGACTGAKLEDLRAAASVLRGRRLADGMRLMV----APASRQ---DQEQAD 342
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G Q+ +AG A+ SCGAC G
Sbjct: 343 QEG-----VMQVLRDAGAQVLAT-SCGACAG 367
>gi|365873074|ref|ZP_09412607.1| LOW QUALITY PROTEIN: homoaconitate hydratase family
protein/3-isopropylmalate dehydratase, large subunit
[Thermanaerovibrio velox DSM 12556]
gi|363983161|gb|EHM09368.1| LOW QUALITY PROTEIN: homoaconitate hydratase family
protein/3-isopropylmalate dehydratase, large subunit
[Thermanaerovibrio velox DSM 12556]
Length = 417
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 190/384 (49%), Gaps = 24/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ + I +R + G V VD +D+ P + F + + +V+D +
Sbjct: 4 TMIQTILARHGGDGDI--GSIVEAQVDFGFANDITAPPAIEEFLRMGAK--RVFDPARCA 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+PDH+ D ++ + I RDF EQ I +F P GV H L +EG
Sbjct: 60 IVPDHFTPPKDIQSAEQLRICRDFAAEQGILFF-----------EPGKCGVEHAFLPEEG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PGE+ +G DSHTCT GA G TG+G+TD + GK KVPP+++ L+G
Sbjct: 109 YVLPGEIAVGADSHTCTMGALGTLGTGMGSTDLAAIWALGKTWFKVPPSIKVTLEGIPGP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL IIGEI V GA Y ++EF G V+ LS++ R T+ NM +E G K + D
Sbjct: 169 FVSGKDVILNIIGEIGVDGARYMALEFHGEGVKNLSLDSRFTMANMGIECGAKAALFVPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y P+EP Y + A + E + L P P R + ++VK
Sbjct: 229 ETVLEYARRNPKRPFEPAYPEAGAQYHRELTVQLQHLTPPGGVPQPALQRKARKGLREVK 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+ +V+IGSCT G+ ED AAA V V L+PA+++V+ + +
Sbjct: 289 VHQVFIGSCTNGRLEDIRAAASVLQGRQLAPSVRGVLIPASRRVFS--------AAAKEG 340
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+F EAG +PSCG CLGG
Sbjct: 341 LLDVFIEAGFSI-CTPSCGPCLGG 363
>gi|317050587|ref|YP_004111703.1| homoaconitate hydratase family protein [Desulfurispirillum indicum
S5]
gi|316945671|gb|ADU65147.1| homoaconitate hydratase family protein [Desulfurispirillum indicum
S5]
Length = 427
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 200/394 (50%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KIF A + + PG V +++D++ H++ P + + G++ +V+D KI
Sbjct: 4 TVAQKIFD-AHLRDEPFPGTKV-LSLDMVFCHEITTPIAIDDLVR-LGKD-RVFDPNKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + + +LRD+ +IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAQQGKVLRDWARRHSIKDFFDIG----------RNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P TLR ++G +P
Sbjct: 110 FVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRQPKTLRINVNGTLPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL IIG ISV GAT +EF G VE LSME RMTLCNM +EAGG +G+ D
Sbjct: 170 GVYAKDVILHIIGTISVNGATDMVIEFGGNVVENLSMESRMTLCNMAIEAGGTSGICAPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL ++ Y+ D A + D S LEP+ + PD
Sbjct: 230 MTTVEYLWPFIKDDYPSKEAALEDYKQWQPDADAEYERVLEIDASSLEPMCTYGYKPDCV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ D KID+VYIGSCT G+ ED AA V V L PAT ++
Sbjct: 290 KPVSQMTDSKIDQVYIGSCTNGRIEDLREAAAVLKGKTIADSVRGILSPATPDIFKQ--- 346
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + IF EAG C T +P+CGACLG
Sbjct: 347 -----ANHEGLIDIFLEAGFCVT--NPTCGACLG 373
>gi|94272137|ref|ZP_01292076.1| Cis-homoaconitase:3-isopropylmalate dehydratase, prokaryotic [delta
proteobacterium MLMS-1]
gi|93450224|gb|EAT01511.1| Cis-homoaconitase:3-isopropylmalate dehydratase, prokaryotic [delta
proteobacterium MLMS-1]
Length = 428
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 203/396 (51%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF+ A + +P +N +++D++M H++ P I E +V+D +KI
Sbjct: 4 TIVEKIFA-AHRRDNPTP-ENTILDLDVVMCHEITTP--IAITDLEARGMDRVFDPDKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH D + ILRD+ ++ F+DI + GVCH ++G
Sbjct: 60 VVIDHVTPAKDSKTATQGKILRDWARRHQLRDFFDI----------GHNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G ++P T+R + G +
Sbjct: 110 FIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFRLPKTIRVEITGTLAA 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+II E++V GAT + +EF G V +SME RMTLCNM VEAG GV D
Sbjct: 170 GVYAKDVILKIIKELTVNGATDRVLEFTGPVVAAMSMESRMTLCNMAVEAGATCGVCLPD 229
Query: 310 GTTFKYLEDKTSLPYEPV----------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL YE + +SD A + + FDIS L P PD
Sbjct: 230 RTTAEYLWPFIQDQYESIEAAVTGFTRWHSDPDALYEQQLHFDISGLTPQATYGFKPDEV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
+ +D++YIGSCT G+ ED AA++ G+K+ +V L PAT KV
Sbjct: 290 KDIAAMEGTPVDQIYIGSCTNGRIEDLREAARIL--KGRKISEQVRGILAPATPKVAAQA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF EAG C T +P+CGACLG
Sbjct: 348 LE--------EGILKIFMEAGFCVT--NPTCGACLG 373
>gi|444243205|gb|AGD93259.1| 3-isopropylmalate dehydratase large subunit [uncultured bacterium]
Length = 388
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 184/358 (51%), Gaps = 29/358 (8%)
Query: 99 MTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQN 158
M HD GP +E G A +WD +KIV++ DHY+ SD+ + R V I RD+ Q
Sbjct: 1 MFHDSSGPRRLQPMLQELG--ASLWDPKKIVLVIDHYVPESDDESRRIVRIARDWAAGQQ 58
Query: 159 IKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIG 218
+ YD G+CH+ + Q GH RPG +G DSH+ T GAFG + GIG
Sbjct: 59 LPNVYD------------SVGICHVVVPQHGHIRPGMFCVGGDSHSPTGGAFGAYMFGIG 106
Query: 219 NTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVG 278
+T+ V TGK+ +KVP TL +G + + AKD++L +IG + G Y+++EF G
Sbjct: 107 STEMLGVAVTGKIWVKVPQTLMMRWNGRLAAGVTAKDMMLHMIGRYGMNGGRYQAVEFCG 166
Query: 279 TTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDK---TSLPYEPVYSDEKASF 335
V L M+ERMTL NM E G + G++ D TT YL + SL SD A
Sbjct: 167 EAVRALPMQERMTLSNMSAELGSQVGLIAPDETTAAYLREAGVTDSLDLARWQSDADAD- 225
Query: 336 LSEYR-FDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFL 394
+E+ FD + L P VA PHSP N + +DV + YIG+CTG K ED AAA V
Sbjct: 226 -AEWHDFDAALLAPQVAAPHSPANARDVDQYRDVPVQVAYIGACTGAKLEDLRAAASVLR 284
Query: 395 ASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + PA++ +D G Q+ ++AG A+ SCGAC G
Sbjct: 285 GRRLAPGMSLMVAPASR---LDQQQAEQEG-----VMQVLQDAGAQVLAT-SCGACAG 333
>gi|253581257|ref|ZP_04858513.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847458|gb|EES75432.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 415
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 207/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD +M HD+ P F K E K+WD +K V
Sbjct: 4 TVIEKII-RNNVGKTVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLWDPDKAV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S +D R F Y +K++ G+CH + + G
Sbjct: 61 LIYDHLVPAS------QLDDTRHFHAGDAFARKYGMKNVHR------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V++GE+P
Sbjct: 109 YVKPGNIVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIEGELPG 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+TV+ +++ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDIILRLIGDLGADGATYRALEFTGSTVKNMTVASRMTMANMAIEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + + + + DE A+++ + P++A P D E + +
Sbjct: 229 EKTAEYCDIELNEFQKSLTGDEDATYMKTITYRAEDFVPVMACPSQVDKIKNVSELEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++ + +
Sbjct: 289 IDQVFIGSCTNGRLEDLRAAAEVL--KGKKVADYVKLIVTPASRKIYRQAIAEGIMDT-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG P CG C G
Sbjct: 345 ------LAEAGA-MITHPGCGLCCG 362
>gi|48477984|ref|YP_023690.1| 3-isopropylmalate dehydratase large subunit [Picrophilus torridus
DSM 9790]
gi|73920852|sp|Q6L0K5.1|LEUC_PICTO RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|48430632|gb|AAT43497.1| 3-isopropylmalate dehydratase large subunit [Picrophilus torridus
DSM 9790]
Length = 413
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 201/385 (52%), Gaps = 29/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EKIFS S + GD V N+D +M +D+ GP + F E G ++IV
Sbjct: 3 TAVEKIFSDKSGNDARA-GDYVIANLDYVMVNDITGPIAIDAFN-ELGYKPL---SDRIV 57
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+IPDH++ D + ++DF ++ N ++ DLG GVCH + ++G
Sbjct: 58 VIPDHFVPPKDINSAIQYKKVKDFALKHNTHFY----DLGR-------GGVCHQVMMEKG 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG ++ G DSHT T GA + GIG+T+AG + GTG++ KVP T ++G
Sbjct: 107 FAAPGRLIAGADSHTNTYGALSCVSVGIGSTEAGVIFGTGRMWFKVPETDLIRINGRPKK 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KD+IL ++ I G+ YK MEF G+T++ L + ERMT+ NM EAG K AD
Sbjct: 167 GVYGKDIILNVLSRIGNGGSAYKCMEFTGSTIDYLDINERMTMANMTTEAGAKCSFFNAD 226
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKDV 368
T Y+ +KT+ Y+ DE A + D S++EP VA P+SPDN R +++ +
Sbjct: 227 EKTLDYIRNKTN-DYKIYKDDENAEYSRIIDIDASEIEPSVAIPNSPDNVRPVSKVSE-- 283
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+ID+ YIGSCT G+ ED AA + V +VPA+Q+V+ +
Sbjct: 284 RIDQAYIGSCTNGRIEDIRRAALILKDKKIDKNVRLMVVPASQEVYNQALK--------E 335
Query: 429 TCSQIFEEAGCDTPASPSCGACLGG 453
I +AG A +CGACLGG
Sbjct: 336 GLVDIITDAG-GYFAGTTCGACLGG 359
>gi|452126437|ref|ZP_21939020.1| 3-isopropylmalate dehydratase large subunit [Bordetella holmesii
F627]
gi|452129810|ref|ZP_21942383.1| 3-isopropylmalate dehydratase large subunit [Bordetella holmesii
H558]
gi|451921532|gb|EMD71677.1| 3-isopropylmalate dehydratase large subunit [Bordetella holmesii
F627]
gi|451922670|gb|EMD72814.1| 3-isopropylmalate dehydratase large subunit [Bordetella holmesii
H558]
Length = 440
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 177/329 (53%), Gaps = 19/329 (5%)
Query: 87 PGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRN 146
PG+ + V + M HD GP ++ + +WDR K+V++ DHY+ +D+ + R
Sbjct: 22 PGEIITCKVALAMFHDSSGPRRLQPMLQDL--DTGLWDRNKVVLVMDHYVPEADDESRRI 79
Query: 147 VDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
V I RD+ EQ + + YD G+CH+ L + GH RPG +G DSH+ T
Sbjct: 80 VRIARDWAQEQRLPHVYD------------SVGICHVVLPEHGHIRPGMFCVGGDSHSPT 127
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG + G+G+T+ V+ +G++ ++VP TL G + ++AKD++L +IG +
Sbjct: 128 GGAFGAYMFGVGSTEMLGVVSSGEIWMRVPETLMMCWHGRLAPGVMAKDMMLYLIGRYGM 187
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDK-TSLPYE 325
G Y+++EF G V LSM ERMTL N+ E G + G++ D T YL D +L
Sbjct: 188 NGGRYQAVEFCGEAVGALSMRERMTLSNLSAEMGAQAGLIAPDAVTQAYLHDAGAALTDI 247
Query: 326 PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTED 385
+ + + + FD S L P VA PHSP N A + D + YIG+CTG K +D
Sbjct: 248 AHWRSDTGAPAHWHEFDASTLAPQVAAPHSPANTAPVYDYPDTPVQVAYIGACTGAKLDD 307
Query: 386 FLAAAKVFLASGKKV--KVPTFLVPATQK 412
AAA V G++V +V + PA+Q+
Sbjct: 308 LRAAASVL--RGRRVPPQVHLLVAPASQR 334
>gi|328948236|ref|YP_004365573.1| homoaconitate hydratase family protein [Treponema succinifaciens
DSM 2489]
gi|328448560|gb|AEB14276.1| homoaconitate hydratase family protein [Treponema succinifaciens
DSM 2489]
Length = 428
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 203/395 (51%), Gaps = 37/395 (9%)
Query: 70 TLTEKIFS-RASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ +KIFS E P G N+ + +D + H++ P + + +V+D KI
Sbjct: 4 TIAQKIFSSHLVESP--FEGTNI-LKLDRVFCHEITTPIAINDLVER--NKDRVFDSTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILRD+ NIK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKCAMQEKILRDWAKRNNIKDFFDIG------AN----GVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P ++FVL+G++
Sbjct: 109 GFVRPGFTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFREPKAIKFVLNGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
D + AKD+IL +IG+I V GAT EF G V+ +SMEERMT+CNM VEAG +G+
Sbjct: 169 DGVYAKDVILFLIGQIGVNGATNCVAEFTGPIVDNMSMEERMTICNMAVEAGATSGICFP 228
Query: 309 DGTTFKYL--------EDKTSL--PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D TT +YL E K + Y DE A + Y FD+S LEP+ + PD
Sbjct: 229 DMTTVEYLWPFIKDEFESKEAALKEYSKWIDDEDAEYEKVYTFDLSDLEPICTIEYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
E K K+D+VYIGSCT G+ D AA++ V + PAT VY
Sbjct: 289 IKKVSEMKGTKVDQVYIGSCTNGRISDLRVAAEILKGHKISEGVRGIVSPATPL----VY 344
Query: 419 TLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + +IF +AG C T +P+CGACLG
Sbjct: 345 KMALE----EGIIKIFMDAGFCVT--NPTCGACLG 373
>gi|291522452|emb|CBK80745.1| 3-isopropylmalate dehydratase, large subunit [Coprococcus catus
GD/7]
Length = 414
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 207/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD +M HD+ P F K E +K++D EK++
Sbjct: 4 TIIEKII-RHNTGKSVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFSKLYDPEKVI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S R+ I F + + + + G+CH + + G
Sbjct: 61 LIYDHLVPASQLDDTRHFRIGDAFAAKYGMPHVHR------------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+V+ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V++GE+P
Sbjct: 109 YVKPGDVVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIEGELPA 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATYK++EF G+TV+ +S+ RMT+ NM VEAG K + D
Sbjct: 169 NVMSKDIILRLIGDLGADGATYKTLEFFGSTVDNMSVASRMTMSNMAVEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + + + + D A ++ + P++A P D + +
Sbjct: 229 EKTARYCDIELNDYQKSLKGDADAVYVRTLTYRAEDFVPVMACPSQVDKIRDVSTLEGIP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V G+KV V + PA++K++ L +
Sbjct: 289 IDQVFIGSCTNGRLEDLAAAAEVL--KGQKVADYVKLIVTPASRKIYKQAMDLGI----- 341
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ EAG P CG C G
Sbjct: 342 ---METLAEAGA-IITHPGCGLCCG 362
>gi|148655207|ref|YP_001275412.1| 3-isopropylmalate dehydratase large subunit [Roseiflexus sp. RS-1]
gi|148567317|gb|ABQ89462.1| homoaconitase large subunit [Roseiflexus sp. RS-1]
Length = 421
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 206/419 (49%), Gaps = 44/419 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL E+I S A+ +P +S G+N+ +D+ M HD P I E G +VWDR+++
Sbjct: 4 TLAEQILSHAAGRP-VSAGENIVARIDLAMMHDSISPSIIKILHHELGAE-RVWDRDRVA 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + + + LR + +Q I +F+D+ +G+ H L +EG
Sbjct: 62 VVVDHVAPAATIQNAEHQLALRRWVRQQQITHFFDVG-----------RGISHPVLVEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG +++G+DSH+ GA G F G+G+TD L TG+ L+VP T+R + G
Sbjct: 111 LARPGMLIIGSDSHSTAYGAVGAFGAGMGSTDMALALATGQTWLRVPETVRILARGRFQP 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL L++ I GATY+S+E+ G VE LS+ ERMTL + VE G K G++P
Sbjct: 171 GVGAKDLGLRVARLIGADGATYQSVEWHG--VEELSIGERMTLATLSVEIGAKAGIIPPV 228
Query: 310 GTTFKYLEDKTSLPYEP-VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
G ++ + + + +E A + D+ LEP V+ PH DN + V
Sbjct: 229 GPGWEEHATRRGITVPSWLRVEEGARYSRTVEVDLDTLEPQVSVPHFVDNVRDLSDLGRV 288
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++D VYIG+CT G D AAA++ G+KV V +VPA+ + +
Sbjct: 289 EVDVVYIGTCTNGHANDLAAAARIL--KGRKVARGVRLLVVPASSEALQQA-------TA 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG---------------GPKDTYARMNEPMASLCL 470
T + + E +P CGAC+G G ++ RM P A + L
Sbjct: 340 DGTLATLLESGAA--IGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYL 396
>gi|332295928|ref|YP_004437851.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179031|gb|AEE14720.1| 3-isopropylmalate dehydratase large subunit [Thermodesulfobium
narugense DSM 14796]
Length = 413
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 205/385 (53%), Gaps = 31/385 (8%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVI 130
+ +KIF R +E +SPG + V VD++ D GP SF F+K E + E I
Sbjct: 1 MVQKIFERKTES-DVSPGMMIIVPVDLVYVQDGTGPLSFRQFEKL--EKKSLAFPENTAI 57
Query: 131 IPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGH 190
DH + + + + LR + K YDI D GVCH +A E
Sbjct: 58 FLDHAAPSPRKELSNDHIYLRTMASKLGCK-LYDIGD-----------GVCH-QIAIESL 104
Query: 191 CRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDY 250
RP ++++G DSHTCT GA G FATG+G+TD +G GK ++P ++ L G+MP Y
Sbjct: 105 VRPFDIVVGADSHTCTGGALGAFATGMGSTDIAVSMGLGKNWFRIPESILIKLTGKMPKY 164
Query: 251 LLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADG 310
+ KD+I+ I+ GA+Y+++EF G VE + + +R+T+ NM +E G K G+ P+D
Sbjct: 165 ITGKDIIISIVKHFGSNGASYQALEFSG-DVENIPIHDRLTISNMAIECGAKVGIFPSDE 223
Query: 311 TTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T ++LE ++ + D A ++ F + ++EP+V+ PH A+ KD+K
Sbjct: 224 VTREFLEKNNRFEDFKELNPDLDAEYIDRLEFKLEEIEPMVSVPHYVHTARRAKNLKDIK 283
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
I++V++GSCT G+ ED AAK L GKKV V +VPA++KV++D
Sbjct: 284 INQVFLGSCTNGRLEDLRMAAK--LLRGKKVAKGVRLIVVPASRKVYLDALK-------- 333
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ +I +AG A P CG C+G
Sbjct: 334 EGIIEILVDAGASIMA-PGCGPCVG 357
>gi|291562924|emb|CBL41740.1| 3-isopropylmalate dehydratase, large subunit [butyrate-producing
bacterium SS3/4]
Length = 414
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 208/385 (54%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI + + + PGD V VNVD +M HD+ P FK+ E K+WD +K+V
Sbjct: 4 TVIEKIVEHNTGR-SVKPGDIVTVNVDRVMIHDIFIPFVAEKFKEMGFE--KLWDPDKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S R+ + F + + + + G+CH + + G
Sbjct: 61 LIYDHLVPASQLDDTRHFHVGDAFAAKYGMTHVHR------------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+V GTDSHT T G G F++GIG T+ +LGTG + ++VP T++ V++G++P+
Sbjct: 109 YVKPGDVAFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIRVPETIKVVINGKLPE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATYK++EF G+ VE +++ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDVILRLIGDLGADGATYKALEFSGSAVESMTVASRMTISNMAIEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + ++ D A++ ++ P++A P D E + +
Sbjct: 229 EKTAEYCNVTLNDYQKSLFGDADANYCRVMEYNAEDFVPVMACPSQVDKIRNVSELEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++ L + +
Sbjct: 289 IDQVFIGSCTNGRLEDLAAAAEVL--KGKKVAKFVKLIVTPASRKIYRQAADLGILETLA 346
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
++ + I P CG C G
Sbjct: 347 ESGAMI---------THPGCGLCCG 362
>gi|147678854|ref|YP_001213069.1| 3-isopropylmalate dehydratase large subunit [Pelotomaculum
thermopropionicum SI]
gi|146274951|dbj|BAF60700.1| 3-isopropylmalate dehydratase large subunit [Pelotomaculum
thermopropionicum SI]
Length = 417
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 202/385 (52%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + ++ D V VD +M D P + F + G +V+DRE++
Sbjct: 4 TIIEKILSSHSGQ-EVHANDIVVARVDYVMGQDGTAPLAIKAFNEMGGR--EVFDRERVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + +E + ++R+F E+ YD+ + GVCH + + G
Sbjct: 61 FVIDHSAPSPNEGVSSLHKLMREFSREKGF-CLYDVGE-----------GVCHQVVPESG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT GA F+TG+G+TD L +G++ KVP T++FV G +
Sbjct: 109 LVGPGSLVIGADSHTCTYGALNAFSTGVGSTDLAGGLISGRMWFKVPGTIKFVCRGTLSP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KDLIL +IG+++ GATY + E+ G + LS E R T+ NM +E G K G++ AD
Sbjct: 169 GVFSKDLILYLIGDVTADGATYMAAEYTGEAIAALSQEARFTIANMAIEMGAKAGLMEAD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
TF +L T + PV +D A + +D+S +EP VA+PH DN A E
Sbjct: 229 EKTFAWLGRFTRRKFSPVNADPDAEYAKILEYDVSGIEPQVARPHRVDNVAPVGEVAGKP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ + IG+CT G+ ED AA + G+KV +V + PA+++V++D
Sbjct: 289 VQQAVIGTCTNGRLEDLRIAAGIL--RGRKVHKEVRLIVAPASRRVFLDAMA-------- 338
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ + EAG +P CG C+G
Sbjct: 339 EGIIRDLVEAGAAV-VTPGCGPCVG 362
>gi|153810125|ref|ZP_01962793.1| hypothetical protein RUMOBE_00506 [Ruminococcus obeum ATCC 29174]
gi|149833304|gb|EDM88385.1| isopropylmalate/citramalate isomerase large subunit [Ruminococcus
obeum ATCC 29174]
Length = 423
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 206/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD +M HD+ P F K E K+WD +K+V
Sbjct: 13 TVIEKII-RNNVGHTVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFKKLWDPDKVV 69
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S +D R F Y +K++ G+CH + + G
Sbjct: 70 LIYDHLVPAS------QLDDTRHFHEGDAFAEKYGMKNVHR------SDGICHQLMTEAG 117
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG ++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DGE+P
Sbjct: 118 YVKPGNIVFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIDGELPA 177
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G+ V+ +S+ RMT+ NM +EAG K + D
Sbjct: 178 NVMSKDVILRLIGDLGADGATYRALEFTGSAVKNMSVASRMTIANMAIEAGAKCALFTPD 237
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y E + + + + D A++L + P++A P D + +
Sbjct: 238 EKTAEYCEIELNDFQKSLVGDGDAAYLKTMTYRGENFVPVMACPSQVDKIRDVSTLEGTE 297
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++ L + +
Sbjct: 298 IDQVFIGSCTNGRLEDLAAAAEVL--KGKKVADYVKLIVTPASRKIYRQAIELGILDT-- 353
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG P CG C G
Sbjct: 354 ------LAEAGA-MITHPGCGLCCG 371
>gi|189426214|ref|YP_001953391.1| 3-isopropylmalate dehydratase large subunit [Geobacter lovleyi SZ]
gi|189422473|gb|ACD96871.1| homoaconitate hydratase family protein [Geobacter lovleyi SZ]
Length = 427
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 205/394 (52%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EKIF+ S G V + +D+++ H++ P + E G++ +V+D +I
Sbjct: 4 TTAEKIFAAHLVDEPFS-GTKV-LKLDVVLCHEITTPIAIADLI-ERGKD-RVFDPTRIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + D + ILRD+ Q IK F+D+ AN GVCH ++G
Sbjct: 60 AVIDHVTPSKDSKTATQAKILRDWARRQQIKDFFDVG------AN----GVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R ++G++P
Sbjct: 110 FIRPGNTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKTIRINVNGDLPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +IG+I V GAT + +EF GTT++ ++ME RMTLCNM +EAGG +G+ D
Sbjct: 170 GVYAKDVILTLIGKIGVNGATDRVIEFRGTTIDAMTMESRMTLCNMAIEAGGTSGICMPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL ++ Y+ SD A++ D + L P+ PD
Sbjct: 230 MTTVEYLWPFIQGEFASKEAALADYQKWASDADATYEQTIEIDAAALVPVATFNFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E D ++D++Y+GSCT G+ ED AA++ + V L PAT K++ D
Sbjct: 290 KAVTEFTDSRVDQIYLGSCTNGRLEDLRIAAQILKGNKLAEHVRGILSPATPKIYRDAMK 349
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ IF +AG C T + +CGACLG
Sbjct: 350 --------EGLIDIFLDAGFCVT--NSTCGACLG 373
>gi|148269757|ref|YP_001244217.1| 3-isopropylmalate dehydratase large subunit [Thermotoga petrophila
RKU-1]
gi|147735301|gb|ABQ46641.1| 3-isopropylmalate dehydratase, large subunit [Thermotoga petrophila
RKU-1]
Length = 418
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 210/386 (54%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIFS + + + G+ V VDI M D GP F++ + KV K
Sbjct: 4 TLAEKIFSEHTGR-DVKAGEIVLARVDIAMAQDGTGPLMINEFRELGFKEVKV---PKAF 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + ++R+F E +K F D G+ G+ H LA E
Sbjct: 60 LFIDHASPSPRKELSNSQKMMREFGKEMGVKVF----DAGD--------GISHQILA-EK 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+++ G DSHTCTAG G F TG+G+TD + G G+ KVP T++ V++G++ D
Sbjct: 107 YVKPGDLVAGADSHTCTAGGLGAFGTGMGSTDVAIIFGLGQNWFKVPETIKVVVNGKLQD 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+I + GATYK++EF G+ +E +++E+R+T+ NM VE G K G++P+D
Sbjct: 167 GVYAKDIILEIARILGSDGATYKALEFHGSCIENMNVEDRLTISNMAVEVGAKAGLMPSD 226
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALAR-ECK 366
T ++L+ + + +D A + +E D LEPLV+ PH DN R ++ E +
Sbjct: 227 EKTREFLKKMGREEDFRELKADPDAVYETEIEIDADTLEPLVSLPHYVDNVRKVSEVEKE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD
Sbjct: 287 KIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K + F E G P CG C+G
Sbjct: 340 -KGIIKKFVELGAAV-IPPGCGPCVG 363
>gi|226322408|ref|ZP_03797926.1| hypothetical protein COPCOM_00176 [Coprococcus comes ATCC 27758]
gi|225209208|gb|EEG91562.1| isopropylmalate/citramalate isomerase large subunit [Coprococcus
comes ATCC 27758]
Length = 414
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 205/385 (53%), Gaps = 28/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI R + + PGD V VNVD +M HD+ P F K E K+ D +K+V
Sbjct: 4 TIIEKII-RHNIGKAVKPGDIVTVNVDRVMIHDIFIP--FVAEKFEEMGFTKLHDPDKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH + S + R+ F + + + + G+CH + + G
Sbjct: 61 LIYDHLVPASQQDDTRHFRTGDAFADKYGLTHVHR------------SDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++ GTDSHT T G G F++GIG T+ +LGTG + +KVP T++ V+DGE+P+
Sbjct: 109 YVKPGDIAFGTDSHTTTYGCVGAFSSGIGYTEMASILGTGTMWIKVPETIKVVIDGELPE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL++IG++ GATY+++EF G T+E +++ RMT+ NM +EAG K + D
Sbjct: 169 NVMSKDIILRLIGDLRADGATYRALEFAGNTIENMTVASRMTMANMAIEAGAKCALFTPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +Y + + + + D A+++ + P++A P D E + +
Sbjct: 229 EKTAEYCNIELNDYQKSLVGDPDATYMRTITYKAEDFVPVMALPSQVDKIRNVSEVEGTE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
ID+V+IGSCT G+ ED AAA+V GKKV V + PA++K++ + + +
Sbjct: 289 IDQVFIGSCTNGRLEDLQAAAEVL--KGKKVADFVKLIVTPASRKIYKQAADMGILTT-- 344
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
EAG P CG C G
Sbjct: 345 ------LSEAGA-IITHPGCGLCCG 362
>gi|291522454|emb|CBK80747.1| 3-isopropylmalate dehydratase, large subunit [Coprococcus catus
GD/7]
Length = 417
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 190/368 (51%), Gaps = 24/368 (6%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD VN+D +M++D + ++ + + D +K+V I DH + + + +
Sbjct: 19 VRPGDIHTVNLDRMMSNDGTTHLTVDMYNNQLNL-PHIADPKKLVFIVDHNVPSDNPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E I ++ + KGVCH + E + GE++ G DSHT
Sbjct: 78 ASQKKMRDFARENGIDFW-------------EGKGVCH-QIMMENYVCSGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
C+ GA G F TG+G TD + + TG + VP T++F L G++PD + A+DLIL+IIG +
Sbjct: 124 CSYGAIGAFGTGVGCTDFLYGMVTGTSWVLVPETVKFNLIGKLPDGVYARDLILEIIGTV 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + LS+ +R+TLCNM VEAG K G+ D YLE+ P
Sbjct: 184 GANGCNYQVMEFTGEGAKTLSISDRITLCNMAVEAGAKTGIFEPDEKVIAYLEEHGRKPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
+SD A + EY FD+SK+ P+VAKP DN A E + +KID ++GSC G+ E
Sbjct: 244 AVYHSDPDAVYAREYTFDLSKIRPVVAKPDFVDNLCPAEEVRGIKIDEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPAS 444
D A + V +VPA+ +++ + IF +AG +
Sbjct: 304 DLRVGASILKGHKVADSVRFLVVPASLEIYKQALK--------EGLIDIFMDAGA-IVMN 354
Query: 445 PSCGACLG 452
P+C C G
Sbjct: 355 PNCSVCWG 362
>gi|187250814|ref|YP_001875296.1| 3-isopropylmalate dehydratase large subunit [Elusimicrobium minutum
Pei191]
gi|226735967|sp|B2KBD7.1|LEUC_ELUMP RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|186970974|gb|ACC97959.1| Putative aconitase [Elusimicrobium minutum Pei191]
Length = 418
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 206/386 (53%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S + ++ G+ V +VD+ D GP + KK K+ + + +
Sbjct: 4 TIAEKIISNHSGR-RVKAGEFVIADVDLTAVQDGTGPLTVEELKK--AGFTKLANPARTI 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + +LR+F E + ++G +GVCH LA++
Sbjct: 61 LFIDHAAPSPRKELSNSQVVLRNFAKETGAI----LSEIG--------EGVCHQLLAEK- 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PGE+L+G DSHTCT GA G FATG+G+TD + GK LK P T + ++G
Sbjct: 108 YVNPGEILIGADSHTCTGGALGAFATGMGSTDVAVGMALGKTWLKAPQTFKIEVEGAFKK 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL +IG I GATYK++EF G+T+ + M +R TL NM VEAG K G+ D
Sbjct: 168 GVGAKDLILHLIGVIGADGATYKALEFHGSTIRNMEMADRFTLANMAVEAGAKAGLFFTD 227
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T YL ++ ++ + +DE A + + D S LEP V+ PH+ DN E KD+
Sbjct: 228 EKTRAYLAERGRGDNFKLISADEGADYEKVIKIDASSLEPTVSCPHTVDNTKTVGELKDI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
K+++V+IG+CT G+ ED AA++ KKV TF+ PA++ V +
Sbjct: 288 KVNQVFIGTCTNGRIEDLRIAAEIL--KDKKVNPGTRTFITPASRDVMLAALK------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF +AG +P CG C+G
Sbjct: 339 -EGLIEIFVKAGASVQ-TPGCGPCVG 362
>gi|15643060|ref|NP_228103.1| 3-isopropylmalate dehydratase large subunit [Thermotoga maritima
MSB8]
gi|418046227|ref|ZP_12684321.1| homoaconitate hydratase family protein [Thermotoga maritima MSB8]
gi|22001731|sp|Q9WYC7.1|LEUC1_THEMA RecName: Full=3-isopropylmalate dehydratase large subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|4980790|gb|AAD35379.1|AE001711_2 3-isopropylmalate dehydratase, large subunit, putative [Thermotoga
maritima MSB8]
gi|351675780|gb|EHA58940.1| homoaconitate hydratase family protein [Thermotoga maritima MSB8]
Length = 418
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 210/386 (54%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIFS + + G+ V VDI M D GP F++ + KV K
Sbjct: 4 TLAEKIFSEHVGR-DVKAGEIVLARVDIAMAQDGTGPLMINEFRELGFKEVKV---PKAF 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + ++R+F E +K F D G+ G+ H LA E
Sbjct: 60 LFIDHASPSPRKELSNSQKMMREFGKEMGVKVF----DAGD--------GISHQILA-EK 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+++ G DSHTCTAG G F TG+G+TD + G G+ KVP T++ V++G++ D
Sbjct: 107 YVKPGDLVAGADSHTCTAGGLGAFGTGMGSTDVAIIFGLGQNWFKVPETIKVVVNGKLQD 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+I + GATYK++EF G+ +E +++E+R+T+ NM VE G K G++P+D
Sbjct: 167 GVYAKDIILEIARILGSDGATYKALEFHGSCIENMNVEDRLTISNMAVEVGAKAGLMPSD 226
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALAR-ECK 366
T ++L+ + + +D A + +E D + LEPLV+ PH DN R ++ E +
Sbjct: 227 EKTREFLKKMGREEDFRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD
Sbjct: 287 KIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K + F E G P CG C+G
Sbjct: 340 -KGIIKKFVELGAAV-IPPGCGPCVG 363
>gi|281412348|ref|YP_003346427.1| 3-isopropylmalate dehydratase [Thermotoga naphthophila RKU-10]
gi|403252897|ref|ZP_10919202.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. EMP]
gi|281373451|gb|ADA67013.1| 3-isopropylmalate dehydratase [Thermotoga naphthophila RKU-10]
gi|402811659|gb|EJX26143.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. EMP]
Length = 418
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 211/386 (54%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIFS + + + G+ V VDI M D GP F++ + KV K
Sbjct: 4 TLAEKIFSEHTGR-DVKAGEIVLARVDIAMAQDGTGPLMINEFRELGFKEVKV---PKAF 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + ++R+F E +K F D G+ G+ H LA E
Sbjct: 60 LFIDHASPSPRKELSNSQKMMREFGKEMGVKVF----DAGD--------GISHQILA-EK 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+++ G DSHTCTAG G F TG+G+TD + G G+ KVP +++ V++G++ D
Sbjct: 107 YVKPGDLVAGADSHTCTAGGLGAFGTGMGSTDVAIIFGLGQNWFKVPESIKVVVNGKLQD 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+I + GATYK++EF G+ +E +++E+R+T+ NM VE G K G++P+D
Sbjct: 167 GVYAKDIILEIARILGSDGATYKALEFHGSCIENMNVEDRLTISNMAVEVGAKAGLMPSD 226
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALAR-ECK 366
T ++L+ + + +D A + +E D + LEPLV+ PH DN R ++ E +
Sbjct: 227 EKTREFLKKMGREEDFRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD
Sbjct: 287 KIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K + F E G P CG C+G
Sbjct: 340 -KGIIKKFVELGAAV-IPPGCGPCVG 363
>gi|206901746|ref|YP_002251337.1| 3-isopropylmalate dehydratase large subunit 2 [Dictyoglomus
thermophilum H-6-12]
gi|206740849|gb|ACI19907.1| 3-isopropylmalate dehydratase large subunit 2 [Dictyoglomus
thermophilum H-6-12]
Length = 418
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 208/386 (53%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIFS + K + GD V +D LM D P + +F++ GE KV + E+++
Sbjct: 4 TIAEKIFSAHTGK-DVKAGDLVIAKLDALMGQDGTSPLAIKVFEELGGE--KVVNAERVL 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + +E ++RDF KY I + G +GVCH + G
Sbjct: 61 LVMDHSVPPPNEGVANLHKLMRDFAE----KYGTQITEFG--------EGVCHQVFMERG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT G F+TG+G+++ + TGK+ KVP T++ +L+G++P
Sbjct: 109 LATPGGLVIGADSHTCTYGVLNCFSTGVGSSELAAAMYTGKLWFKVPNTVKIILNGKLPK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD++L + G G TYK++EF G + LS++ R T+ NMVVE G K G++P D
Sbjct: 169 GVVSKDVVLFLAGYFKADGLTYKAIEFDGEVIRDLSIDGRATITNMVVEMGAKAGIMPFD 228
Query: 310 GTTFKYLEDKTSLPYEP-VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T ++ + P E V +D A + + Y F++S LEP VA PH+ DN + +V
Sbjct: 229 EKTKEFFKS-IGFPQEKGVEADPDAEYEAIYEFNLSNLEPQVAMPHTVDNVYPISQIDNV 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KI +IG+CT G+ ED AA + G+KV V + PA++++++
Sbjct: 288 KIHEAFIGTCTNGRLEDLRLAASIL--KGRKVSKNVKMIITPASKRIFIQAMK------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF EAG +P CG C+G
Sbjct: 339 -EGLIDIFLEAGA-IVTNPGCGPCVG 362
>gi|448459758|ref|ZP_21596808.1| 3-isopropylmalate dehydratase [Halorubrum lipolyticum DSM 21995]
gi|445808210|gb|EMA58284.1| 3-isopropylmalate dehydratase [Halorubrum lipolyticum DSM 21995]
Length = 437
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 208/386 (53%), Gaps = 25/386 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EK+ S S + + GD V VD++MTHDV GP +F +F+ G++ ++ D + V
Sbjct: 5 TISEKLLSEKSGR-DVRAGDYVEAAVDVMMTHDVTGPLTFEVFEDVTGDDPELVDPDNTV 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH+ A N +I+R+F + Y++ D G+CH L +EG
Sbjct: 64 ITIDHHAPADGVEAANNHNIVREFADTYGAQQ-YEVGD-----------GICHQVLVEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG++++G DSH+ T G G F TG+G+TD G L TG++ +VP TLRF ++G++PD
Sbjct: 112 FVSPGDLVIGADSHSTTFGGVGGFGTGVGSTDLGTTLATGELWFRVPETLRFEVEGDLPD 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL+ IG++ G TYK+ E+ G+ VE L + ER+ L NM +E GGK G+V D
Sbjct: 172 GVYAKDLILKFIGDVGFDGCTYKTAEYGGSAVEALPIHERLVLSNMAIEMGGKAGIVAPD 231
Query: 310 GTTFKYLEDKT-SLPYEPVYS--DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T +LE +T P P Y+ D+ A + + + + L P V+ P +P+N E
Sbjct: 232 ERTADFLEAQTGERPAIPAYTQPDDDADYEAVHTYQAESLSPQVSTPSNPENAVPVDEVV 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
ID++++G+CT G+ ED A V +VPA++ V+ + V
Sbjct: 292 GTDIDQLFVGTCTNGRYEDIRIVADVIEGERLAPDTRMVVVPASRSVYKQMMDTGV---- 347
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ F +AG S CG+C G
Sbjct: 348 ----METFVDAGA-IVQSAGCGSCFG 368
>gi|217968011|ref|YP_002353517.1| 3-isopropylmalate dehydratase [Dictyoglomus turgidum DSM 6724]
gi|217337110|gb|ACK42903.1| 3-isopropylmalate dehydratase [Dictyoglomus turgidum DSM 6724]
Length = 418
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 208/386 (53%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIFS A + GD V +D LM D P + +F++ GE KV + ++++
Sbjct: 4 TIAEKIFS-AHVGRDVKAGDLVIAKLDALMGQDGTSPLAIKVFEELGGE--KVVNADRVL 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + +E ++RDF KY I + G +GVCH + G
Sbjct: 61 LVMDHSVPPPNEGVANLHKLMRDFAE----KYGTQITEFG--------EGVCHQVFMERG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSHTCT G F+TG+G+++ + TGK+ KVP T++ +L+G++
Sbjct: 109 LATPGSLVIGADSHTCTYGVLNCFSTGVGSSELAAAMYTGKLWFKVPSTVKIILNGKLSK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+++KD+IL + G G TYK++EF G + LS++ R T+ NMVVE G K G++P D
Sbjct: 169 GVVSKDVILFLAGYFKADGLTYKAIEFDGEVINNLSIDGRATITNMVVEMGAKAGIMPFD 228
Query: 310 GTTFKYLEDKTSLPYEP-VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T ++ + LP E V +D A + + Y F++S LEP VA PH+ DN + +++
Sbjct: 229 EKTKEFFKS-IGLPQEKGVEADPDAEYEAVYEFNLSNLEPQVALPHTVDNVYPISQIENI 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
KI +IG+CT G+ ED AA + G+KV V + PA+++++M
Sbjct: 288 KIHEAFIGTCTNGRLEDLRLAASIL--KGRKVAKNVKMIVTPASKRIFMQAMK------- 338
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ IF EAG +P CG C+G
Sbjct: 339 -EGLVDIFLEAGA-IVTNPGCGPCVG 362
>gi|392407704|ref|YP_006444312.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Anaerobaculum mobile DSM
13181]
gi|390620840|gb|AFM21987.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Anaerobaculum mobile DSM
13181]
Length = 418
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 198/394 (50%), Gaps = 27/394 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAK-VWDREK 127
M EKI ++AS + + G+ V VD+ +D+ + + + K V E+
Sbjct: 1 MHALEKILAKASGRNIVKVGEIVEAEVDLAEVNDL----YLQVIRSFYEMGGKNVACPER 56
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ + DHY +A N +R+FC + I+ +DI + GVCH LA+
Sbjct: 57 VAFVFDHYSPPPSIKAADNQRQMREFCKKMGIELLFDIGE-----------GVCHQLLAE 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
G PG++++ TDSHT T GA G FATG+G TD +L TG++ KVP + +DG M
Sbjct: 106 SGLVGPGKIIIETDSHTTTLGALGAFATGVGATDLAIILLTGRLWFKVPSIVNIRIDGSM 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
AKD+IL I+G + A YK++EF G+TV + M+ER LCNM VE G K +
Sbjct: 166 QPGTTAKDVILYILGRLKQDAAIYKAIEFTGSTVSSMPMDERFVLCNMSVEMGAKTAYIQ 225
Query: 308 ADGTTFKYLED--KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D TF +L+D +E +D+ S+ Y D+S L P VA P S D+ ++
Sbjct: 226 PDKVTFDFLKDIGAKGEDFEEFTTDKDFSYAEAYDVDVSGLVPQVALPGSVDDVCCVKDT 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ + I +V IG+CTGG+ D AA++ V LVPA++K++ + T
Sbjct: 286 EGIPISQVLIGTCTGGRLNDIRVAAEILKGKHVAKDVRCLLVPASKKIFREALT------ 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
K I EAG +P CG CLG + A
Sbjct: 340 --KGYVDILTEAGV-VFVTPGCGPCLGAHEGVLA 370
>gi|73539209|ref|YP_299576.1| 3-isopropylmalate dehydratase large subunit [Ralstonia eutropha
JMP134]
gi|72122546|gb|AAZ64732.1| 3-isopropylmalate dehydratase, large subunit [Ralstonia eutropha
JMP134]
Length = 434
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 195/403 (48%), Gaps = 38/403 (9%)
Query: 60 ATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN 119
A +G + A TL +K+ +RA+ PG VD+ M+HD GP + G
Sbjct: 5 AASGHIPPA-TLAQKLVARAAGLAHAEPGSLAMCRVDLAMSHDSSGPRRVAPLLEALGTT 63
Query: 120 AKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKG 179
VWD + V++ DH++ SD A + RD+ D +G
Sbjct: 64 --VWDPSRYVVVTDHFVPASDPAAEAILHFTRDWTRSSGAHLI-------------DGEG 108
Query: 180 VCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTL 239
+CH+ L + GH PG +++G DSH+ T GAFG + G+G T+ VL TG++ L+VP T+
Sbjct: 109 ICHVVLPEHGHVLPGRLIVGGDSHSPTGGAFGAYMFGVGATEMAGVLATGEIWLRVPQTI 168
Query: 240 RFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEA 299
R DG + + AKD++L + ++ + G Y+++E+ G+ V L M+ERMTL NM E
Sbjct: 169 RLQWDGALAPGVCAKDMMLFLCAKLGLGGGRYEAIEYAGSAVAALPMQERMTLANMSAEL 228
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVA 351
G + G+V D T +L +P + + SD A L+ + FD + L P VA
Sbjct: 229 GAQTGLVAPDVVTLDWLA-AAGVPAQTLAEIDLAHWRSDTDAPLLANHVFDAAALTPQVA 287
Query: 352 KPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPA 409
PHSP N A + + Y+G+CTG K ED AA V G++V V + PA
Sbjct: 288 APHSPANSAPVDQAAGESVQIAYLGACTGAKLEDLRMAASVL--RGRRVAPGVSLQVAPA 345
Query: 410 TQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + + + +AG D + +CGAC G
Sbjct: 346 SARDQQQAQR--------EGTLAVLADAGADLLPN-ACGACAG 379
>gi|11499781|ref|NP_071024.1| 3-isopropylmalate dehydratase large subunit [Archaeoglobus fulgidus
DSM 4304]
gi|3122333|sp|O28084.1|LEUC2_ARCFU RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|2648330|gb|AAB89057.1| 3-isopropylmalate dehydratase, large subunit (leuC) [Archaeoglobus
fulgidus DSM 4304]
Length = 416
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 203/386 (52%), Gaps = 31/386 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S K GD V +D + D P + E G + DR
Sbjct: 4 TIAEKILSEKS-KSDAYAGDIVVAEIDQIALQDGTAPLAIRQLM-ELGTEVRAADR---- 57
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
H+ + R R+ +Q Y + K +F NP +G+ H + E
Sbjct: 58 ---THFFVDHAAPSPR-----RELSNDQKFIYEFAKKVGADF--NPPGEGIIHQIMV-ER 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++ +G DSHTCT G G F+TG+G+TD + GK +VP + R LDG +P
Sbjct: 107 YVKPGDLAVGADSHTCTYGGIGAFSTGMGSTDVAVAIALGKNWFRVPESFRVQLDGSLPK 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL++IG++ V GATYK++EF G E +++EER+T+ NM VE G K G+ +D
Sbjct: 167 GVFAKDVILKLIGDLGVDGATYKALEFHGECAENMTVEERLTIANMAVECGAKAGIFESD 226
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T K+L E + V +DE A + E D+S L P+V+KPH+ DN A E +
Sbjct: 227 ENTRKFLAELGREGDFREVKADEDAEYEKEIYMDVSSLVPVVSKPHNVDNVAEISEVEGT 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
++++VYIG+CT G+ D AA++ G+KVK V +VPA+++V++
Sbjct: 287 EVNQVYIGTCTNGRLSDLEVAARIL--KGRKVKEGVRLIVVPASRRVYLQALD------- 337
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K ++F EAG +P CG C+G
Sbjct: 338 -KGLIRVFVEAG-GMVLNPGCGPCVG 361
>gi|170288444|ref|YP_001738682.1| 3-isopropylmalate dehydratase large subunit [Thermotoga sp. RQ2]
gi|170175947|gb|ACB08999.1| 3-isopropylmalate dehydratase [Thermotoga sp. RQ2]
Length = 418
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 210/386 (54%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKIFS + + G+ V VDI M D GP F++ + KV K
Sbjct: 4 TLAEKIFSEHVGR-DVKAGEIVLARVDIAMAQDGTGPLMINEFRELGFKEVKV---PKAF 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + ++R+F E +K F D G+ G+ H LA E
Sbjct: 60 LFIDHASPSPRKELSNSQKMMREFGKEMGVKVF----DAGD--------GISHQILA-EK 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG+++ G DSHTCTAG G F TG+G+TD + G G+ KVP +++ V++G++ D
Sbjct: 107 YVKPGDLVAGADSHTCTAGGLGAFGTGMGSTDVAIIFGLGQNWFKVPESIKVVVNGKLQD 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+I + GATYK++EF G+ +E +++E+R+T+ NM VE G K G++P+D
Sbjct: 167 GVYAKDIILEIARILGSDGATYKALEFHGSCIENMNVEDRLTISNMAVEVGAKAGLMPSD 226
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALAR-ECK 366
T ++L+ + + +D A + +E D + LEPLV+ PH DN R ++ E +
Sbjct: 227 EKTREFLKKMGREEDFRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKE 286
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD
Sbjct: 287 KIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE------- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
K + F E G P CG C+G
Sbjct: 340 -KGIIKKFVELGAAV-IPPGCGPCVG 363
>gi|325969038|ref|YP_004245230.1| 3-isopropylmalate dehydratase [Vulcanisaeta moutnovskia 768-28]
gi|323708241|gb|ADY01728.1| 3-isopropylmalate dehydratase [Vulcanisaeta moutnovskia 768-28]
Length = 416
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 194/384 (50%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI +RAS +P +SPGD V VNVD+ HD+ G + +K ++WD +K V
Sbjct: 4 TLTEKILTRASGRP-ISPGDIVEVNVDLAAFHDLTGYHVIEVMEKM--GKVRIWDLDKFV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH ERA LR N+KYF+D+ D G+ H L E
Sbjct: 61 LAFDHLAPPPTERAAEIQVGLRKLAKSLNVKYFHDVGD-----------GILH-QLLLEK 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT TAGA G FA G+G +D ++ TGK L +P + L G +
Sbjct: 109 YALPGQVVMAADSHTTTAGAVGAFAQGLGASDIAAIVITGKTWLMIPEPFKIRLMGRLNP 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KD+ L I+ E G + KS+EF M+ R T+ NM E G + D
Sbjct: 169 GVYGKDVALHILREFKAEGLSGKSVEFYVDDPSAFPMDYRATVSNMGTEMGADAAMFIPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y+ + +L +PV D A ++ EY ++S+LEPLVA PHS DN E + +
Sbjct: 229 QETINYIRNTRNLDVKPVTPDLGAKYMDEYDIELSRLEPLVAAPHSVDNVKSISEVEGLD 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D V+IGSCT G+ D AAAK+ L G K K +PA++ V+ L
Sbjct: 289 VDYVFIGSCTNGRLSDIEAAAKI-LKRG-KAKARCIAIPASRDVFERALEL--------G 338
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
I +AGC +CG C+GG
Sbjct: 339 YIDILVKAGCVVTYG-TCGPCIGG 361
>gi|355679571|ref|ZP_09061404.1| hypothetical protein HMPREF9469_04441 [Clostridium citroniae
WAL-17108]
gi|354812148|gb|EHE96768.1| hypothetical protein HMPREF9469_04441 [Clostridium citroniae
WAL-17108]
Length = 419
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 199/395 (50%), Gaps = 26/395 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI ++ S + ++S G+ V VD +D+ + + E G VWD +
Sbjct: 1 MHAIEKILAKNSGRKKVSTGEIVTAKVDFAEINDLYLQTVYSFY--EMG-GETVWDNTRA 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DHY D ++ N + +R F + N+KY +D GVCH + +
Sbjct: 58 AFVFDHYAPAPDIKSASNHEEMRGFAKKNNLKYHFDTN-----------CGVCHQVMPEA 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +++ TDSHT T GAFG TG G TD +L TG++ ++P + L+GE
Sbjct: 107 GVIYPGMIVVATDSHTTTHGAFGAMGTGCGATDMATILMTGELWFRIPEIIEVRLEGETK 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL ++G+I GA YK+++F G+ VE+L++ RM +CNM VE G K +
Sbjct: 167 KGVYPKDVILHVLGKIKADGAVYKAIDFTGSYVEQLNVAGRMVICNMAVEMGAKTAYMQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--- 365
+ Y+ + + YE Y+D + Y +D+S+LEP +A PHS DN A +
Sbjct: 227 NQDVLDYVSKRAARSYEVQYTDPDFQYQESYCWDVSELEPQLACPHSVDNVAPLSKVILE 286
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+DV +++ Y+GSCTGG+ ED A + +VPA+ +V +
Sbjct: 287 QDVILNQGYVGSCTGGREEDIAETAGILRGKHIPPYCRLVVVPASAEVMLSCME------ 340
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR 460
K Q +AG T A+P CGACLG + A+
Sbjct: 341 --KGYIQDLMKAGA-TIATPGCGACLGAHEGIIAQ 372
>gi|239617608|ref|YP_002940930.1| 3-isopropylmalate dehydratase large subunit [Kosmotoga olearia TBF
19.5.1]
gi|239506439|gb|ACR79926.1| homoaconitate hydratase family protein [Kosmotoga olearia TBF
19.5.1]
Length = 417
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 204/385 (52%), Gaps = 29/385 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA-KVWDREKI 128
T+ EKI S + ++ GD V VDI M D GP + EF V
Sbjct: 4 TIAEKIISEHVGR-DVNSGDIVVAKVDIAMVQDGTGP----LAVDEFCTMGFDVLKAPNS 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
++ DH + + + LRDF K + D+G +GV H L E
Sbjct: 59 ILFIDHASPSPRKELSNAQKKLRDFSK----KTGAILSDIG--------EGVSHQILV-E 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ +PG++++G DSHTCT+GA G FATG+G+TD G GKV LKVP +L+FVL+G++P
Sbjct: 106 KYVKPGDLVVGADSHTCTSGALGAFATGMGSTDVALAFGLGKVWLKVPASLKFVLNGKIP 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
D + +KD+IL IIG I GA YK MEF G +E++S E R T+ NM +EAG K+G++
Sbjct: 166 DGVFSKDIILHIIGLIGADGANYKVMEFEGEVIEQISQEARFTITNMAIEAGAKSGIIAP 225
Query: 309 DGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +L Y + SD A + Y D+S LEP VA PH+ DN E +
Sbjct: 226 DEKTRAFLRAYGRESDYREIKSDPDAVYEKIYEIDVSNLEPAVALPHTVDNTKSISEVEG 285
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+KID+V+IG+CT G+ ED AA + K V ++PA+++V++
Sbjct: 286 IKIDQVFIGTCTNGRLEDLRVAASILKGREKHPDVRLIVIPASKEVYLKALE-------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF E+G T +P CG C+G
Sbjct: 338 EGLIKIFVESGA-TVLAPGCGPCVG 361
>gi|95928692|ref|ZP_01311438.1| homoaconitate hydratase family protein [Desulfuromonas acetoxidans
DSM 684]
gi|95135037|gb|EAT16690.1| homoaconitate hydratase family protein [Desulfuromonas acetoxidans
DSM 684]
Length = 427
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 196/394 (49%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF+ S G V +++D ++ H++ P I E+ +V+D+EKI
Sbjct: 4 TIAEKIFASHLRDEPFS-GTKV-LDLDRVLCHEITTP--IAIADLEWRGKDRVFDKEKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + D + +LRD+ I F+D+ + GVCH ++G
Sbjct: 60 AVIDHVTPSKDTKTAIQAKMLRDWARRHEITDFFDVG----------HNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG + DSHTCT GAFG FA G+G TD + G + P T+R L+G + D
Sbjct: 110 FIRPGFTAIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPATIRVNLNGALSD 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +IG++ V GAT + +EF G V+ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVFAKDVILYVIGQLGVNGATDRVIEFAGPVVDAMSMESRMTLCNMAIEAGGTCGICMPD 229
Query: 310 GTTFKYLEDKTSLPYEPV----------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T YL Y +SD AS+ F+IS LEP V + PD
Sbjct: 230 EVTVDYLWPFIQDEYADKAAAAADFKKWHSDADASYDQVLDFNISTLEPHVTYGYKPDCV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E +D++YIG+CT G+ ED AA + V + PAT K++ D
Sbjct: 290 KPVSEMAGAPVDQIYIGTCTNGRIEDLREAAAILKGRRIADTVRGIVSPATPKIFRDALA 349
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ QIF +AG C T +P+CGACLG
Sbjct: 350 EGI--------IQIFMDAGFCVT--NPTCGACLG 373
>gi|296531970|ref|ZP_06894755.1| 3-isopropylmalate dehydratase [Roseomonas cervicalis ATCC 49957]
gi|296267704|gb|EFH13544.1| 3-isopropylmalate dehydratase [Roseomonas cervicalis ATCC 49957]
Length = 427
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 187/384 (48%), Gaps = 21/384 (5%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
+T+KI + + + + PG + V D+++ +DV GP SF F A+V+D E+IV
Sbjct: 5 AITQKILAAHAVEGEAVPGAILTVRPDVVLLNDVSGPLSFEQFA--LMGAARVFDPERIV 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH+ D A + + RDF +Q I +FY+ P G+ H LA+ G
Sbjct: 63 LVADHFAPAPDVTAAGAIAMTRDFARQQGIAHFYE----------PGRGGIEHTLLAELG 112
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
G ++ G DSHTCTAGAF G G+TD L GK+ ++VP ++R L G
Sbjct: 113 MIGHGGIVFGADSHTCTAGAFNALGIGFGSTDLAGALALGKLWMRVPDSIRVELSGTPGA 172
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+IL++I I GA S+EF G + L M+ERM + NM VEAG V D
Sbjct: 173 HVTGKDVILELIRRIGSDGAADASLEFGGPGLAALGMDERMAVANMAVEAGADMCVFEGD 232
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
+ + + P V D A + D+S L P+VA+P SP + + +
Sbjct: 233 ARSAADMAARGMAPVPAVMPDAGAVYRQRIAIDLSALRPMVARPPSPASGVAVEALRGQR 292
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+VY+G+C+ G D A V V +VPATQK+W +
Sbjct: 293 VDQVYVGNCSNGTLTDLRQVAAVLRGRQVAPGVRMVVVPATQKIWRAALA--------EG 344
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
AG ++P+CGAC GG
Sbjct: 345 LLDTIAAAGAAI-STPTCGACFGG 367
>gi|188591896|ref|YP_001796494.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus
taiwanensis LMG 19424]
gi|170938270|emb|CAP63255.1| 3-isopropylmalate dehydratase large subunit [Cupriavidus
taiwanensis LMG 19424]
Length = 428
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 24/351 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RA+ PG V VD+ M+HD GP +E G VWD + V
Sbjct: 7 TLAQKLVARAAGLAYAEPGSVVICQVDLAMSHDSSGPRRVAPLLQELGTG--VWDPSRYV 64
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH++ D +A + RD+ E + D +G+CH+ L + G
Sbjct: 65 VVTDHFVPGGDAQAESILRFTRDWTREAGAHFI-------------DAEGICHVVLPEHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++G DSH+ T GAFG + G+G T+ VL TG++ L+VP T+R DG++
Sbjct: 112 HVLPGRLIVGGDSHSPTGGAFGAYMFGVGATEMAGVLATGEIWLRVPDTIRLQWDGQLAS 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + + G Y+++EF G+ V L M+ERMTL NM E G + G+V D
Sbjct: 172 GVCAKDVMLFLCATLGMGGGRYQALEFTGSAVAALPMQERMTLTNMSTELGAQTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
T +L + +P + + +D A L+ +RFD + L P VA PHSP N A
Sbjct: 232 AVTLDWLA-QAGVPAQTLAAIDLAHWRTDAGAPVLATHRFDAAALAPQVAAPHSPANSAP 290
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQK 412
+ Y+G+CTG K ED AA+V V + PA+++
Sbjct: 291 VDRAAGEPVQIAYLGACTGAKLEDLRMAARVLRGRRVAAGVTLQVAPASRR 341
>gi|374579062|ref|ZP_09652156.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374415144|gb|EHQ87579.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 428
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 196/394 (49%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EK+F + + + D + +D + H++ P I + +V+D KI
Sbjct: 4 TIAEKLFD--AHRVNMPFPDTHVLKLDRVFCHEITTP--IAITDLIARDMDRVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+D+ GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGIKDFFDV----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL+G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKMVLNGTLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G V+ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVVDAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL ++ Y SD AS+ Y +D++ LEP+V PD
Sbjct: 230 MTTVEYLWEFIKDEFNTKEDALKEYSKWVSDADASYEKVYEYDVTNLEPMVTFGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E KID+VYIGSCT G+ ED AA + + + PAT D+Y+
Sbjct: 290 KTVHEMSGTKIDQVYIGSCTNGRIEDLRIAASILKDKKISDDLRAIVSPATP----DIYS 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + ++F+ AG C T +P+CGACLG
Sbjct: 346 MALK----EGLIEVFQNAGFCVT--NPTCGACLG 373
>gi|379010171|ref|YP_005267983.1| 3-isopropylmalate dehydratase large subunit LeuC1 [Acetobacterium
woodii DSM 1030]
gi|375300960|gb|AFA47094.1| 3-isopropylmalate dehydratase large subunit LeuC1 [Acetobacterium
woodii DSM 1030]
Length = 428
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 203/396 (51%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF A + P +V + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKIFD-AHRVNEPFPDTHV-LKLDRVFCHEITTPIAITDLMARGMD--RVFDLTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWARRHEIKDFFDIGK----------NGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA GIG TD + G P T++ VL+G +
Sbjct: 110 FVRPGYTIIMGDSHTCTHGAFGAFAAGIGTTDLEVGILKGVCAFHFPKTIKIVLNGALKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G VE +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVVEAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYL----EDKTSLP------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT YL +D+ + Y SD A + +D+S+LEPLV PD
Sbjct: 230 MTTVDYLWEFIQDEYATKADALNDYAKWVSDADAEYERICEYDVSQLEPLVTVGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDV 417
+E K+D++YIGSCT G+ ED AA V GKK+ +V + PAT +
Sbjct: 290 KSVKEMAGTKVDQIYIGSCTNGRIEDLRIAAAVL--KGKKISDEVRAIVSPATPA----I 343
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
Y++ + + +IF++AG C T +P+CGACLG
Sbjct: 344 YSMALK----EGLIEIFQDAGFCVT--NPTCGACLG 373
>gi|347522615|ref|YP_004780185.1| 3-isopropylmalate dehydratase [Pyrolobus fumarii 1A]
gi|343459497|gb|AEM37933.1| 3-isopropylmalate dehydratase [Pyrolobus fumarii 1A]
Length = 417
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 207/388 (53%), Gaps = 32/388 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTE I S+ ++ ++ PG+ + VD ++ HD+ G + +K + WD KIV
Sbjct: 4 TLTELILSKHVKEGRVEPGEVITARVDRVIFHDLTGYHVIEVMEK--AGKTEPWDPSKIV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + RA R++ ++ + + +D+G+ G+ H + EG
Sbjct: 62 VAFDHLVPAPTVRAAEVQKKTREWALKHGVIF----RDVGH--------GILHQVVVDEG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG+V++G DSHT TAGA G FATG+G +D + G+V ++VP +R L G +
Sbjct: 110 LVEPGQVVIGADSHTNTAGAVGAFATGMGASDVAYAALFGEVWMRVPEPIRVELKGSLKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL+L+++G+ A YK++EFVG V+ LS+E+RMT+ NM E G K G+ P+D
Sbjct: 170 PVTTKDLVLKMLGDHGAGFANYKALEFVGEAVKTLSIEDRMTVANMTTEMGAKVGLFPSD 229
Query: 310 GTTFKYLED--KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T Y + K+ EP A + +D+S LEP+VA P DN E +
Sbjct: 230 EVTIDYYQSLGKSVKRLEPA---PNAEYTDTLEYDLSSLEPMVAVPPRVDNVKPVTEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGS 425
V++D+V+IGSCT G+ D AAA++ G+KV +V ++ A++K++ +
Sbjct: 287 VEVDQVFIGSCTNGRLSDLEAAARIL--KGRKVHPRVRCIVIAASRKIYEEALK------ 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ ++ EAGC +CG C+GG
Sbjct: 339 --RGIVEVLTEAGCLVTWG-TCGPCIGG 363
>gi|322420107|ref|YP_004199330.1| homoaconitate hydratase family protein [Geobacter sp. M18]
gi|320126494|gb|ADW14054.1| homoaconitate hydratase family protein [Geobacter sp. M18]
Length = 427
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 203/397 (51%), Gaps = 39/397 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT +KIF+ A + G V + +D++M H++ P + G++ +V+D KI
Sbjct: 3 MTTAQKIFA-AHLVDEPFAGTKV-LGIDVVMCHEITTPIAIADLMAR-GKD-RVFDPNKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + D + +LRD+ +IK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPSKDSKTATQAKMLRDWARRHDIKDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P T+R L+G +P
Sbjct: 109 GFIRPGNTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFREPKTIRVNLNGTLP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL++IGE+ V GAT + +EF G V ++ME RMTLCNM +EAGG +G+
Sbjct: 169 KGVYAKDAILRVIGELGVNGATDRVIEFGGPIVTGMTMESRMTLCNMAIEAGGTSGICMP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL ++ Y SD A + D+S L PL + PD
Sbjct: 229 DQVTVDYLWPFVSDSFTSKEAALAEYGKWCSDADAEYDKVIDLDLSDLTPLCTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT +++ D
Sbjct: 289 VKSITEMAGTPVDQVYLGSCTNGRLEDLRVAAQIL--KGKKIASNVRGILSPATPQIYKD 346
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ QIF +AG C T +P+CGACLG
Sbjct: 347 AVA--------EGLIQIFMDAGFCVT--NPTCGACLG 373
>gi|116694012|ref|YP_728223.1| 3-isopropylmalate dehydratase large subunit [Ralstonia eutropha
H16]
gi|113528511|emb|CAJ94858.1| 3-Isopropylmalate dehydratase large subunit [Ralstonia eutropha
H16]
Length = 428
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 195/391 (49%), Gaps = 33/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K+ +RA+ G V VD+ M+HD GP +E G VWD + V
Sbjct: 7 TLAQKLVARAAGLAHAEIGTVVICRVDLAMSHDSSGPRRVAPLLEELGTG--VWDPSRYV 64
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH++ D +A + RD+ + + D +G+CH+ L + G
Sbjct: 65 VVTDHFVPGGDAQAESILRFTRDWTRQSGAHFI-------------DAEGICHVVLPERG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++G DSH+ T GAFG + G+G T+ VL TG++ L+VP T+R DG++
Sbjct: 112 HVLPGRLIVGGDSHSPTGGAFGAYMFGVGATEMAGVLATGEIWLRVPNTIRLQWDGQLAA 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + + + G Y+++E+ G+ V L M+ERMTL NM E G + G+V D
Sbjct: 172 GVCAKDMMLFLCATLGMGGGRYEALEYTGSAVAALPMQERMTLANMSAELGAQTGLVAPD 231
Query: 310 GTTFKYLEDKTSLPYEPV--------YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
T +L + +P + + +D A L+ +RFD + L P VA PHSP N A
Sbjct: 232 AVTLGWLAEA-GVPAQTLAAIDLAHWRTDPDAPVLATHRFDAAALVPQVAAPHSPANSAP 290
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
+ + Y+G+CTG K ED AA+V V + PA+++ D
Sbjct: 291 VDQAAGEPVQIAYLGACTGAKLEDLRMAARVLRRRRVAAGVTLQVAPASRR---DQLLAE 347
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
G+ G I +AG T +CGAC G
Sbjct: 348 QEGTLG-----ILTDAGA-TLLPNACGACAG 372
>gi|408421331|ref|YP_006762745.1| 3-isopropylmalate dehydratase, large subunit LeuC [Desulfobacula
toluolica Tol2]
gi|405108544|emb|CCK82041.1| LeuC: 3-isopropylmalate dehydratase, large subunit [Desulfobacula
toluolica Tol2]
Length = 428
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 201/395 (50%), Gaps = 37/395 (9%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + ++P GD + +D + H++ P + G++ +V+D EKI
Sbjct: 4 TIAEKIFDAHLVDEPF---GDVSVLKLDRVFCHEITTPTAIQDLVAR-GKD-RVFDPEKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILRD+ IK F+DI + GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTAMQGKILRDWAKRHKIKDFFDI----------GHNGVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G K P T + + G +
Sbjct: 109 GFARPGFTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCTFKKPETYKIEIVGTLQ 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD+IL++I E+ V GAT +EF G V+ ++M++RMTL NM VEAG +G+
Sbjct: 169 NGVYAKDIILKVIQELGVNGATNMVIEFRGNIVDEMNMDQRMTLSNMAVEAGATSGICLP 228
Query: 309 DGTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D TT +YL D + + SDE A + ++ D+S LEPL + PDN
Sbjct: 229 DMTTVEYLWDFIKDEHASKQEALETFSTFNSDEDAVYANQKTIDVSDLEPLTTFGYKPDN 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+ K KID+VYIGSCT G+ ED AAKV V + PAT K++
Sbjct: 289 VKPVSQMKGTKIDQVYIGSCTNGRLEDLRIAAKVLEGHTINENVRGIVSPATPKIFSQAL 348
Query: 419 TLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF E+G C T +P+CGACLG
Sbjct: 349 EEGII--------KIFMESGFCVT--NPTCGACLG 373
>gi|333993256|ref|YP_004525869.1| 3-isopropylmalate dehydratase large subunit 1 [Treponema
azotonutricium ZAS-9]
gi|333735973|gb|AEF81922.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1) [Treponema
azotonutricium ZAS-9]
Length = 427
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 197/401 (49%), Gaps = 45/401 (11%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
TL EKIF + ++KP GD + +D + H++ P + + + KV+D KI
Sbjct: 4 TLAEKIFEAHVTDKPF---GDTWVLKLDRVFCHEITTPIAINDLVSK--KMDKVFDPGKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILRD+ IK F+DI GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTAEQGKILRDWARRHKIKDFFDI----------GRNGVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P T + L G++
Sbjct: 109 GFVRPGFTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRKPETFKVNLTGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL +IG I VAGAT K MEF G E L+ME R+T+CNM VEAG +GV
Sbjct: 169 KGVYAKDIILAVIGRIGVAGATDKVMEFRGPAAEALTMEGRLTICNMAVEAGATSGVCMP 228
Query: 309 DGTTFKYL-------EDKTSLPYEPVY-------SDEKASFLSEYRFDISKLEPLVAKPH 354
D T YL DKT E SD+ A + D S L+PL +
Sbjct: 229 DMVTVDYLWPFVGPDGDKTYAAKEAALADFSKWRSDDDAVYAGSVDIDCSSLDPLATVDY 288
Query: 355 SPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQK 412
PD R+ K KID+VYIGSCT G+ ED AA + GKK+ V + PAT +
Sbjct: 289 KPDQIRTIRQLKGTKIDQVYIGSCTNGRIEDLREAAAI--VRGKKIADTVRGIVSPATTE 346
Query: 413 VWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
V+ + QIF +AG C T A +CGACLG
Sbjct: 347 VYNQALR--------EGLVQIFMDAGFCVTNA--TCGACLG 377
>gi|410471753|ref|YP_006895034.1| 3-isopropylmalate dehydratase large subunit [Bordetella
parapertussis Bpp5]
gi|408441863|emb|CCJ48360.1| putative 3-isopropylmalate dehydratase large subunit [Bordetella
parapertussis Bpp5]
Length = 427
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 177/335 (52%), Gaps = 26/335 (7%)
Query: 88 GDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNV 147
G+ V VD+ M HD GP +E G +WDR +IV++ DHY+ SD+ + R V
Sbjct: 23 GEIVTCKVDLAMFHDSSGPRRLQPMLEELGTG--LWDRSRIVLVMDHYVPESDDESRRIV 80
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
I RD+ EQ + + YD G+CH+ + + GH RPG +G DSH+ T
Sbjct: 81 RIARDWAREQALPHVYD------------SLGICHVVVPEHGHVRPGMFCVGGDSHSPTG 128
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
G FG + G+G+T+ V+ +G++ ++VP TL G + ++AKD++L +IG +
Sbjct: 129 GTFGAYMFGVGSTEMLGVVSSGEIWMRVPDTLMMHWRGRLRPGVMAKDMMLHMIGLHGMN 188
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTS-LPYEP 326
G Y+++EF G V LSM+ERMTL NM E G + G++ D TT +YL + P
Sbjct: 189 GGRYQAVEFCGEAVRALSMQERMTLSNMSAELGAQAGLIAPDRTTAQYLRQAGAPEPDTA 248
Query: 327 VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-------RALARECKDVKIDRVYIGSCT 379
+ + + + +D L P VA PHSP N A + D + YIG+CT
Sbjct: 249 RWQSDPDAPAQWHEYDADSLPPYVAAPHSPANAAPVQAYAAPVQAYADTAVQVAYIGACT 308
Query: 380 GGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQK 412
G K +D AAA+V G++V V + PA+Q+
Sbjct: 309 GAKLDDLRAAAQVL--RGRRVAPGVSLLVAPASQR 341
>gi|374581397|ref|ZP_09654491.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374417479|gb|EHQ89914.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 428
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 196/394 (49%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EK+F + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKLFD--AHRVNMPFPDTHVLKLDRVFCHEITTPIAITDLMARGMD--RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+D+ GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGIKDFFDV----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL+G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKMVLNGALKP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G V+ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVVDAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL ++ Y SD AS+ Y +D++ LEP+V PD
Sbjct: 230 MTTVEYLWEFIKDEFNTKEDALKEYSKWVSDADASYEKVYEYDVTNLEPMVTFGFKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E +ID+VYIGSCT G+ ED AA + + + PAT D+Y+
Sbjct: 290 KTVHEMAGTEIDQVYIGSCTNGRIEDLRIAASILKDKKISDDLRAIVSPATP----DIYS 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + +IF+ AG C T +P+CGACLG
Sbjct: 346 MALK----EGLIEIFQNAGFCVT--NPTCGACLG 373
>gi|289522455|ref|ZP_06439309.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504291|gb|EFD25455.1| homoaconitate hydratase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 418
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 201/395 (50%), Gaps = 29/395 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDRE 126
M EK+ ++AS K + G+ V VD+ +D+ + K F E KV E
Sbjct: 1 MHALEKLLAKASGKSSVKTGEIVEAEVDLAEVNDL-----YLQVIKSFYEMGGKKVAHPE 55
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++ + DHY +A N +R+FC + I YDI + GVCH LA
Sbjct: 56 RVAFVFDHYSPPPTIKAADNQKQMREFCEKMGINMLYDIGE-----------GVCHQLLA 104
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G PG+V++ TDSHT T GA G FATG+G TD +L TG++ KVP + LDG+
Sbjct: 105 ESGLVGPGKVVIETDSHTTTLGALGSFATGVGATDLAIILLTGRLWFKVPSIVNINLDGK 164
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
++AKD+IL ++G++ A Y+++EF G+T+ + M+ER LCNM VE G K +
Sbjct: 165 PSFPVMAKDVILHVLGKLKQDAAIYQAIEFTGSTLSSMEMDERFVLCNMSVEMGAKTAYI 224
Query: 307 PADGTTFKYLEDKTSL--PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D TF +LE + ++ + +DE ++ + D++ L+P +A P S DN E
Sbjct: 225 QPDEITFGFLEAMGAKREDFDVLTTDEGFTYSIVHHIDVNDLKPQIALPGSVDNVTNVEE 284
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ + +V+IG+CTGG+ D A+++ V ++PA++KV+ D L
Sbjct: 285 VEGTPVTQVFIGTCTGGRLNDIKVASEILKGRSVAKNVRCIVIPASKKVFKDALKLGY-- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
Q +AG +P CG CLG + A
Sbjct: 343 ------VQTLMDAGA-VFVTPGCGPCLGAHEGVLA 370
>gi|269792973|ref|YP_003317877.1| homoaconitate hydratase family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100608|gb|ACZ19595.1| homoaconitate hydratase family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 426
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 185/352 (52%), Gaps = 22/352 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T +KI +RAS K + GD VW +D+ D GP F++ G KVWD KI
Sbjct: 4 TAIQKIMARASGK-DVQVGDRVWCRIDLSTARDFGGPNCVLQFEEVMGTEGKVWDPNKIA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
D E+ + N I+R F Q I +D+ G+ L + G
Sbjct: 63 FTFDLQAPAHSEKVSNNQKIIRQFAKRQGISKVFDVN-----------WGIGQHVLLENG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD--AGFVLGTGKVLLKVPPTLRFVLDGEM 247
+PG+V+LGTDSH GA G FATG+GNTD A ++ GT + +VP T++ G+
Sbjct: 112 LVKPGDVILGTDSHMNLLGAVGAFATGVGNTDIVASWIQGT--LWFRVPETMKVTATGKF 169
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ +DL+ ++G + G +K++EFVG +ER S+ ER+TLC+MV E GK G++
Sbjct: 170 QRGVYMRDLLTHLVGTLGADGMFFKAVEFVGDAIERSSLAERITLCSMVTEMSGKVGLIM 229
Query: 308 ADGTTFKYLEDKT--SLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
+G +L + +P E + DE A + D+S LEPL + P +PDN R
Sbjct: 230 PNGEVLDWLVRRAGQEVPERVEMIRPDEDAVYSETVAVDVSSLEPLASCPDAPDNVRKVR 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKV 413
E + +ID+V+IGSC+ G+ ED AA +V A+ KV V + PAT++V
Sbjct: 290 EVQGERIDQVHIGSCSNGRFEDIRAAYEVLKAANFKVADHVRVIITPATREV 341
>gi|429767826|ref|ZP_19300009.1| 3-isopropylmalate dehydratase large subunit [Brevundimonas diminuta
470-4]
gi|429189713|gb|EKY30533.1| 3-isopropylmalate dehydratase large subunit [Brevundimonas diminuta
470-4]
Length = 428
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 198/391 (50%), Gaps = 35/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI +RA+ +++PG V VD+ HD GP + +E G +WD +K+
Sbjct: 6 TLVEKIIARAAGVDRVAPGQLVTAQVDLAFAHDSSGPRRWAPMLRELG--VGLWDPQKVA 63
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DHY+ D + R + + R+F E + F+D+ G+CH+ L + G
Sbjct: 64 IVSDHYVPAVDAESARILKLAREFAAEHQVGAFFDMV------------GICHLVLPEHG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG + G DSH+ TAGAFG +A G G TD ++ TG+ L VP T+R G
Sbjct: 112 LIRPGAFVAGGDSHSPTAGAFGAYAAGYGATDMAAIVATGETWLAVPETIRVEWSGRFGA 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD++L + E+ + A +K++E+ G TVE LSM ERM LCNM E G + GVV D
Sbjct: 172 GVAAKDIMLFLCRELGMDNA-FKAIEYGGDTVEGLSMAERMVLCNMAAELGCEAGVVAPD 230
Query: 310 GTTFKYLEDKTSLPYE------PVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
TTF YL P E + SD A + + +RFD + L+P +A PH P
Sbjct: 231 RTTFAYLR-AAGRPVEDEAAALALASDRDAVYAAVHRFDAATLQPQIAAPHDPSRTQDVT 289
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLP 421
E +K+D+ YIG+C G K ED AA V G+KV T L+ PA+QK
Sbjct: 290 EHAGIKVDQCYIGACVGAKIEDLRMAAAVL--KGRKVSPDTRLLIAPASQKTTTTATQ-- 345
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
T + E P+ CGAC G
Sbjct: 346 -----DGTLQTLMEAGAVLLPS--GCGACAG 369
>gi|427413213|ref|ZP_18903405.1| 3-isopropylmalate dehydratase, large subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716029|gb|EKU79015.1| 3-isopropylmalate dehydratase, large subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 419
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 194/387 (50%), Gaps = 26/387 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EK+ ++ + + G + +D+ +D+ F E G KV ++I
Sbjct: 1 MHAIEKLLAKKAGLDSVKTGQIINCEIDLAGINDLYLQTVRSFF--EMGAT-KVSHPDRI 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DHY S N R+FC EQ+IK DI +GVCH +A +
Sbjct: 58 AMFLDHYAPASTITQVDNQRQFREFCEEQHIKKLMDID-----------QGVCHQVVADK 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG +++ TDSHT T GAFG F TG+G TD +L TG++ +VP ++ +G +P
Sbjct: 107 GWSRPGRIIVITDSHTTTHGAFGAFGTGVGATDLAIILATGQLWFRVPEIIKINFEGTLP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD+IL IG++ A YK++EF G ++ LS+ ERM LCNM E G K +
Sbjct: 167 EGVYAKDIILHAIGQLKADFAVYKAVEFAGPVIDALSVSERMALCNMTTEMGVKTSYIQP 226
Query: 309 DGTTFKYLEDKTSLP---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T ++L K + YE +D + E F++S L P VA P S DN ++
Sbjct: 227 DAVTKEFLASKGLVEGQDYEVYTTDADFKYADEITFNVSDLTPQVAAPSSVDNVFDLKKY 286
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ I++ Y+GSCTGG+ ED AA++ V +VPA++ V+++
Sbjct: 287 EGQTINQAYLGSCTGGRVEDLKVAAEIVKGKHIPRLVRFVIVPASKGVFLEAM------- 339
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
K Q EAG T +P C ACLG
Sbjct: 340 -AKGYVQALVEAGA-TFVTPGCAACLG 364
>gi|302875442|ref|YP_003844075.1| homoaconitate hydratase family protein [Clostridium cellulovorans
743B]
gi|307689042|ref|ZP_07631488.1| 3-isopropylmalate dehydratase large subunit [Clostridium
cellulovorans 743B]
gi|302578299|gb|ADL52311.1| homoaconitate hydratase family protein [Clostridium cellulovorans
743B]
Length = 428
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 197/396 (49%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKIFD--AHRVGMPFPDTHVLKLDRVFCHEITTPIAITDLMARGMD--RVFDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHEIKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL+G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKIVLNGTLQP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G ++ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFAGPVIDAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT +YL D + Y SDE AS+ +D++ LEP+V + PD
Sbjct: 230 MTTVEYLWDFIKDEFSSKEEALKEYSKWVSDEDASYEKVLEYDVTNLEPMVTFGYKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDV 417
E I+++YIGSCT G+ ED AA + GKK+ V + PAT ++
Sbjct: 290 KSVSEMTGTPINQIYIGSCTNGRIEDLRIAASIL--KGKKISDDVRAIVSPATPAIYSKA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF++AG C T +P+CGACLG
Sbjct: 348 LK--------EGLIEIFQDAGFCVT--NPTCGACLG 373
>gi|222099367|ref|YP_002533935.1| 3-isopropylmalate dehydratase large subunit [Thermotoga neapolitana
DSM 4359]
gi|221571757|gb|ACM22569.1| 3-isopropylmalate dehydratase large subunit 1 [Thermotoga
neapolitana DSM 4359]
Length = 420
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 206/387 (53%), Gaps = 31/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR-EKI 128
TL EKIFS + + G+ V VD+ M D GP + KEF E R K
Sbjct: 6 TLAEKIFSEHVGR-DVKAGEIVLARVDVAMAQDGTGP----LMIKEFRELGFREVRVPKA 60
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH + + + + ++R+F E + F D G+ G+ H LA E
Sbjct: 61 FLFIDHASPSPRKELSNSQKLMREFGKEMGVTVF----DAGD--------GISHQILA-E 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ +PG+++ G DSHTCTAG G F TG+G+TD V G G+ KVP T++ V++G++
Sbjct: 108 KYVKPGDLVTGADSHTCTAGGLGAFGTGMGSTDVAIVFGLGQNWFKVPETIKIVIEGKLQ 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD++L+I + GATYK++EF G+ +E + +E+R+T+ NM VE G K G++P+
Sbjct: 168 EGVYAKDIVLEIARILRSDGATYKALEFHGSCIENMDVEDRLTISNMAVEVGAKAGLMPS 227
Query: 309 DGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN--RALAREC 365
D T ++L+ + + +D A++ E D S LEPLV+ PH DN + E
Sbjct: 228 DEKTREFLKKMGREEDFRELKADPDATYEMELEIDASSLEPLVSLPHYVDNVKKVSEVEK 287
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ +KID+V+IG+CT G+ +D A ++ GK V + PA++KV+MD
Sbjct: 288 EKIKIDQVFIGTCTNGRLQDLEIALRILEKHGKHPDVRLIVGPASRKVYMDALE------ 341
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
K + F E G P CG C+G
Sbjct: 342 --KGIIKRFVELGAAI-IPPGCGPCVG 365
>gi|413926710|gb|AFW66642.1| hypothetical protein ZEAMMB73_167521 [Zea mays]
Length = 241
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 128/183 (69%), Gaps = 37/183 (20%)
Query: 108 SFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD 167
S IFKKEFG A+VWDREK+V+IPDHYIFTSD+RANRNVDILRDFC EQN+KYFYDIKD
Sbjct: 93 SLDIFKKEFG--ARVWDREKLVVIPDHYIFTSDDRANRNVDILRDFCAEQNVKYFYDIKD 150
Query: 168 L-GNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVL 226
L F++ YKGVCH CRPGEVLLGTDSHTC AGAFGQFATGIGNTDA
Sbjct: 151 LRQRFRS---YKGVCH--------CRPGEVLLGTDSHTCNAGAFGQFATGIGNTDA---- 195
Query: 227 GTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSM 286
L + LR I IIGEISV+GATYKSMEFVG+TVE L+
Sbjct: 196 ---YKLCYICSFLR----------------IYHIIGEISVSGATYKSMEFVGSTVESLTA 236
Query: 287 EER 289
++
Sbjct: 237 PQK 239
>gi|355670916|ref|ZP_09057563.1| hypothetical protein HMPREF9469_00600 [Clostridium citroniae
WAL-17108]
gi|354815832|gb|EHF00422.1| hypothetical protein HMPREF9469_00600 [Clostridium citroniae
WAL-17108]
Length = 414
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 193/370 (52%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD V +D LM++D + ++ + +N ++ D K+V I DH + + +
Sbjct: 19 VKPGDIHTVKLDRLMSNDGTTHLTVDMYNNKL-KNPRIADARKLVFIVDHNVPADNPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E I ++ + KGVCH + + C PGE++ G DSHT
Sbjct: 78 ASQKKMRDFARENKIDFW-------------EGKGVCHQIMMEHYVC-PGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
CT GA G F TG+G TD + + TG + VP T++F L G +P+ + +DL+L IIGE+
Sbjct: 124 CTYGALGAFGTGVGCTDFLYGMVTGTSWVLVPETVKFNLVGRLPEGVYPRDLMLTIIGEV 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G S+ +RM LCN+ VEAG K G+ AD +YL ++
Sbjct: 184 GANGCNYQVMEFSGEGAGTFSVNDRMVLCNLAVEAGAKTGIFEADEAALEYLRERGRESK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
SD A ++ EY FD+SK++P+VA+P D+ A++ VKID ++GSC G+ E
Sbjct: 244 AVFTSDPDAVYVREYTFDLSKIQPVVARPDFVDDVVPAKDVCGVKIDEAFLGSCNNGRIE 303
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
+ A+ L G+KV V +VPA+ +V+ + IF EAG
Sbjct: 304 ELRVGAE--LLKGRKVADSVRFLVVPASLEVYRQALK--------EGLIDIFMEAGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|51245809|ref|YP_065693.1| 3-isopropylmalate dehydratase large subunit [Desulfotalea
psychrophila LSv54]
gi|50876846|emb|CAG36686.1| probable 3-isopropylmalate dehydratase, large subunit [Desulfotalea
psychrophila LSv54]
Length = 427
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 199/394 (50%), Gaps = 35/394 (8%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + +KP SP DN+ +N+D ++ H++ P I +V+D KI
Sbjct: 4 TIAEKIFDAHLRDKP--SP-DNMVLNLDAVLCHEITTP--IAIMDLVEKGMDQVFDNTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + I+RD+ IK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTALQGKIMRDWAKRHAIKDFFDIG------AN----GVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P +L+ L GE+
Sbjct: 109 GFIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGIYKGVCSFRTPKSLKIELSGELQ 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL +I ++V G T K +EFVG ++ +M ERMTLCNM +EAG G+
Sbjct: 169 HGVTAKDVILAVIKRLTVNGGTDKIIEFVGPVIDAFNMAERMTLCNMAIEAGATCGICLP 228
Query: 309 DGTTFKYLEDKTSLPYEPV----------YSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T +YL + Y + +SD A ++ E + D+S L P V PD
Sbjct: 229 DLVTAEYLWEFIKDDYSDIAAAVADFSKWHSDSDALYVEEIKIDVSPLTPQVTFDFKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+ K+D++YIGSCT G+ ED AAA + V + PAT K +Y
Sbjct: 289 VKDITDMAGTKVDQIYIGSCTNGRIEDLRAAASILKGRTLATGVRGIVTPATPK----IY 344
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
++ + + +IF +AG +P+CGACLG
Sbjct: 345 SMALE----EGIIKIFMDAGF-CVLNPTCGACLG 373
>gi|317470388|ref|ZP_07929778.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
gi|316902116|gb|EFV24040.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
Length = 380
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 34/351 (9%)
Query: 109 FGIFKKEFGENA--KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIK 166
F +++K+F E K+WD +K+V+I DH + S V+ +R F + Y +K
Sbjct: 5 FRLWQKKFEEMGFTKLWDPDKVVLIYDHLVPAS------AVEDIRHFKIGDAFVKKYGLK 58
Query: 167 DLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVL 226
++ G+CH + + G+ +PG+++ GTDSHT T G G F++GIG T+ +L
Sbjct: 59 NIHR------SDGICHQLMTECGYAKPGDIVFGTDSHTTTYGCVGCFSSGIGYTEMASIL 112
Query: 227 GTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSM 286
GTG++ ++VP T++ V++G++PD + +KD+IL++IG++ GATYK++EF G+TVE +S+
Sbjct: 113 GTGEMWVRVPETIKVVINGKLPDNVSSKDIILRLIGDLGADGATYKALEFSGSTVEEMSV 172
Query: 287 EERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKL 346
RMT+ NM +EAG K + D T +Y E + S + +Y DE A + + L
Sbjct: 173 ASRMTISNMAIEAGAKAALFAPDEKTAEYSEVELS-DVDWIYGDEDAEYCRTVVYKAEDL 231
Query: 347 EPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPT 404
P+VA P D E + ++D+V+IGSCT G+ ED AAA++ G+KV V
Sbjct: 232 VPVVACPSQVDKIKPVSEVEGTELDQVFIGSCTNGRLEDLKAAAEIL--DGRKVADFVKL 289
Query: 405 FLVPATQKVWMDVYT---LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ PA++K++M+ L + G +Q P CG C G
Sbjct: 290 IVTPASRKIYMEASKAGYLKILAKAGAIITQ------------PGCGLCCG 328
>gi|374815485|ref|ZP_09719222.1| 3-isopropylmalate dehydratase large subunit [Treponema primitia
ZAS-1]
Length = 436
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 201/408 (49%), Gaps = 53/408 (12%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFG-IFKKEFGENAKVWDREK 127
TL EKIF + +++P GD + +D + H++ P + + K+ +V+D+ K
Sbjct: 4 TLAEKIFDAHVADRPF---GDTWVLRLDRVFCHEITTPIAINDLVSKKLD---RVFDKTK 57
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH D + + ILRD+ IK F+DI GVCH +
Sbjct: 58 LKVVIDHVSPAKDSKTAQQGKILRDWARRHGIKDFFDI----------GRNGVCHAIFPE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G RPG ++ DSHTCT GAFG FA G+G TD + G + P TLR L+G++
Sbjct: 108 KGFVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRKPETLRINLNGKL 167
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE------RLSMEERMTLCNMVVEAGG 301
+ AKD+IL II +I VAGAT K ME G +E LSME RMT+CNM VEAG
Sbjct: 168 SKGVYAKDVILAIIAKIGVAGATDKVMELRGPVIEGADGVPALSMEGRMTICNMAVEAGA 227
Query: 302 KNGVVPADGTTFKYL--------------EDKTSLPYEPVYSDEKASFLSEYRFDISKLE 347
+GV D T YL ++ Y SD+ A + D S LE
Sbjct: 228 TSGVCMPDRVTVDYLWPFIGPAGEKAYATKEAALADYAKWRSDDDAVYAGVVDIDCSGLE 287
Query: 348 PLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTF 405
P + PD R K ++D+VYIGSCT G+ ED AAA V G+K+ V
Sbjct: 288 PSATVDYKPDQVKTIRSLKGTRVDQVYIGSCTNGRMEDLRAAAAVL--KGRKIADTVRGI 345
Query: 406 LVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ PAT +++ + QIF +AG C T A +CGACLG
Sbjct: 346 VSPATTEIYTQALK--------EGLIQIFLDAGFCVTNA--TCGACLG 383
>gi|291519675|emb|CBK74896.1| 3-isopropylmalate dehydratase, large subunit [Butyrivibrio
fibrisolvens 16/4]
Length = 413
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/351 (36%), Positives = 194/351 (55%), Gaps = 27/351 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI ++ PGD V V+VD M D+ P F + K + KV + +V
Sbjct: 4 TLIEKIIGNKVGH-EVKPGDIVTVDVDWCMIDDIMVP--FAVQKFQEMGFKKVAKPDSVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+I DH++ + VD R F + Y IK++ G+CH + + G
Sbjct: 61 LIYDHFLPAT------QVDDTRHFRVGDEFAEKYGIKNVHR------TDGICHQLMTEAG 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++ GTDSHT T G G F+TGIG T+ +LGTG++ +KVP T++ +DG +P
Sbjct: 109 YVKPGDIAFGTDSHTTTYGCVGAFSTGIGYTEMAGILGTGQLWIKVPETIKVEIDGTLPG 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD+IL IIG+++ +GATY+++EF G+TV+ +S+ RMT+ NM VEAG K GV D
Sbjct: 169 NVTSKDIILTIIGDLTASGATYQAIEFTGSTVDAMSVASRMTMSNMSVEAGAKCGVFAPD 228
Query: 310 GTTFKYLEDKTSLPYEP----VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
T Y + +PY+ + SD AS+ R+ +P+ A P DN E
Sbjct: 229 EKTCDYCK----IPYDDKIKNLRSDNDASYSRILRYRAEDFKPVCACPSLVDNIKPVSEL 284
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVW 414
K K+D+V++GSCT G+ ED AAA + GK V V + PA++KV+
Sbjct: 285 KGTKVDQVFLGSCTNGRLEDLRAAATIL--KGKHVAEFVKLIVTPASRKVY 333
>gi|320160232|ref|YP_004173456.1| 3-isopropylmalate dehydratase large subunit [Anaerolinea
thermophila UNI-1]
gi|319994085|dbj|BAJ62856.1| 3-isopropylmalate dehydratase large subunit [Anaerolinea
thermophila UNI-1]
Length = 415
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 204/387 (52%), Gaps = 33/387 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL E+IFSR + + + G+ + ++VD +M+HD P + F+ E G+ + + ++IV
Sbjct: 3 TLVEEIFSRRAGR-SVRAGEIILLDVDTIMSHDNTTPLAIKAFR-EIGK--PIRNPDQIV 58
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + A N + F EQ I++FY + GVCH + +EG
Sbjct: 59 IHFDHAYPAPNLLAAENQQKILRFMREQGIRHFY-------------HHGVCHQVMIEEG 105
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG V++G DSHT T GA G F+TG+G+++ G TGK + P T+ L+G+
Sbjct: 106 FVRPGGVVIGADSHTVTYGALGCFSTGLGSSEIGAAWVTGKCWFRTPETILIRLEGQTAP 165
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD++L + G + + GATY+++EF G+ + L M ER+ NM VE G K G++ D
Sbjct: 166 GVYSKDVMLYLAGVLGMDGATYRALEFEGSYIRNLPMHERLVFSNMSVELGAKCGLIAPD 225
Query: 310 GTTFKYL--EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T +YL E + P+E V+ E+ + D+S LEP +A D RE +
Sbjct: 226 EITLQYLAQETRAQPPFE-VFRAEQPRYERVVEIDVSGLEPQIACHPDVDQVKPLREVEG 284
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGS 425
+ ID VYIG+CT + ED AA + G++V T + PA+Q ++
Sbjct: 285 LPIDEVYIGTCTNARYEDLEIAAGIL--RGRQVHRFTRVLVTPASQTIYEKAMQ------ 336
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG 452
++F +AGC T +P CGACLG
Sbjct: 337 --NGLIEVFLQAGC-TVNAPGCGACLG 360
>gi|384109798|ref|ZP_10010660.1| 3-isopropylmalate dehydratase, large subunit [Treponema sp. JC4]
gi|383868630|gb|EID84267.1| 3-isopropylmalate dehydratase, large subunit [Treponema sp. JC4]
Length = 427
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 199/395 (50%), Gaps = 37/395 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWV-NVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ +KIF E +P N +V +D + H++ P + + +V+D KI
Sbjct: 4 TIAQKIFD---EHLVDTPFPNTYVLKLDRVFCHEITTPIAINDLVER--NKDRVFDCTKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILRD+ QNIK F+DI AN GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTATQGKILRDWARRQNIKDFFDIG------AN----GVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G + P +++FVL+G++
Sbjct: 109 GFVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFREPKSIKFVLNGKLK 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ + AKD+IL++I I V GAT +EF G V+ MEERMT+CNM VEAG +G+
Sbjct: 169 EGVFAKDVILKLINTIGVNGATNCVVEFTGPIVDNFDMEERMTICNMAVEAGATSGICYP 228
Query: 309 DGTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL D + Y SD+ A + Y D+S LEP+ + PD
Sbjct: 229 DEKTVDYLWDFIKEEFGSKEEALKAYSKWRSDDDAEYEKVYTLDLSDLEPVCTFGYKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+E + ++++YIGSCT G+ D AAKV V + PAT K +Y
Sbjct: 289 VKTIKEMEGTPVNQIYIGSCTNGRISDLRIAAKVLKGHHLADGVRGIVSPATPK----IY 344
Query: 419 TLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + IF +AG C T +P+CGACLG
Sbjct: 345 KMALE----EGIIDIFMDAGFCVT--NPTCGACLG 373
>gi|374340916|ref|YP_005097652.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Marinitoga piezophila KA3]
gi|372102450|gb|AEX86354.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Marinitoga piezophila KA3]
Length = 415
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 208/384 (54%), Gaps = 28/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S K + PG+ + NVD+ D GP + F+ +N K +
Sbjct: 4 TLAEKILSMHVGK-DVIPGEIIIANVDLAFVQDGTGPLTVDQFENMNFKNVST----KSL 58
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + LR+FC + + + YDI + G+ H +A+E
Sbjct: 59 VFIDHASPSPRKELSNTQKKLRNFCKKTDAE-IYDIGE-----------GISHQIVAEE- 105
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ +PG++++G DSH+CTAGAF FATG+G+TD G GKV LKVP T + VL ++
Sbjct: 106 YAKPGDLIVGADSHSCTAGAFAAFATGMGSTDISLAYGLGKVWLKVPETYKIVLKNKLNK 165
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +IG I GATYK++EF G ++ LSME R+T+ NM VEAG K G+ PAD
Sbjct: 166 GVYAKDIILYLIGMIGADGATYKALEFSGDGIKTLSMESRLTISNMAVEAGAKVGLFPAD 225
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +Y++++ ++ ++ DE AS+ D+S++EP V+ PH+ DN + K V
Sbjct: 226 EITKEYMKNQGREDEFKELFPDEDASYEKVIEIDLSEIEPQVSFPHTVDNTRNINDAKSV 285
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
KID++YIG+CT G+ ED A + K + + PA++K+++ +
Sbjct: 286 KIDQIYIGTCTNGRMEDLRIVASILKGKKKAEDIRLIIAPASKKIYLQALQ--------E 337
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
F E G T P CG C+G
Sbjct: 338 GLISTFIETGA-TILPPGCGPCVG 360
>gi|239626910|ref|ZP_04669941.1| 3-isopropylmalate dehydratase large subunit 1 [Clostridiales
bacterium 1_7_47_FAA]
gi|239517056|gb|EEQ56922.1| 3-isopropylmalate dehydratase large subunit 1 [Clostridiales
bacterium 1_7_47FAA]
Length = 415
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 194/370 (52%), Gaps = 28/370 (7%)
Query: 85 LSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERAN 144
+ PGD VN+D LM++D + ++ + ++ ++ D +K+V I DH + + +
Sbjct: 19 VKPGDIHTVNLDRLMSNDGTTHLTVDMYNNKL-KHPRIADHKKLVFIVDHNVPADNPKTA 77
Query: 145 RNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHT 204
+ +RDF E I ++ + KGVCH + + C GE++ G DSHT
Sbjct: 78 ASQKKMRDFARENRIDFW-------------EGKGVCHQIMMEHYVC-SGELIFGADSHT 123
Query: 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEI 264
CT GA G F TG+G TD + + TG + VP T++F L G + + + +DL+L IIGEI
Sbjct: 124 CTYGALGAFGTGVGCTDFLYGMVTGTSWVLVPETVKFNLVGRLQEGVYPRDLMLTIIGEI 183
Query: 265 SVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPY 324
G Y+ MEF G + LS+ +RM LCN+ VEAG K G+ AD +YL ++ P
Sbjct: 184 GANGCNYQVMEFTGEGAKTLSINDRMVLCNLAVEAGAKTGIFEADEAAVRYLRERGREPK 243
Query: 325 EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTE 384
SD A + EY FD+S+++P+VA+P D+ A++ VKID ++GSC G+ +
Sbjct: 244 AVYTSDPDAVYAREYTFDLSQIQPVVARPDFVDDVVPAKDVCGVKIDEAFLGSCNNGRID 303
Query: 385 DFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
+ A + GKKV V +VPA+ +V+ + IF E+G
Sbjct: 304 ELRVGAAIL--KGKKVADSVRFLVVPASLEVYRQALK--------EGLIDIFMESGA-IV 352
Query: 443 ASPSCGACLG 452
+P+C C G
Sbjct: 353 MNPNCSVCWG 362
>gi|295108506|emb|CBL22459.1| 3-isopropylmalate dehydratase, large subunit [Ruminococcus obeum
A2-162]
Length = 334
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 27/305 (8%)
Query: 150 LRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGA 209
+RDF NI ++ + KGVCH + E + RPGE++ G DSHTC+ GA
Sbjct: 1 MRDFAKANNIDFW-------------EGKGVCHQVMI-ENYVRPGELIFGADSHTCSYGA 46
Query: 210 FGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGA 269
G F TG+G TD + + TG + VP +++F L G++ + + A+DLIL IIGE+ G
Sbjct: 47 LGAFGTGVGCTDFLYGMVTGTSWVLVPESVKFNLTGKLQEDVTARDLILTIIGEVGANGC 106
Query: 270 TYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYS 329
+Y+ MEF G + LS+ +RMTLCNM VEAG K G+ AD YL++ P +S
Sbjct: 107 SYQVMEFTGEGAKTLSISDRMTLCNMAVEAGAKTGIFEADEKAMDYLKEHGREPKAVFHS 166
Query: 330 DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAA 389
D A ++ EY FD+SK+ P+VA+P DN A E ++I+ ++GSC G+ ED
Sbjct: 167 DPDAKYVREYTFDLSKVRPVVARPDFVDNVVPAEEACGIEINEAFLGSCNNGRIEDLRVG 226
Query: 390 AKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSC 447
A++ GKKV KV +VPA+Q ++ + IF EAG +P+C
Sbjct: 227 AEII--KGKKVSDKVRFLVVPASQTIYRQALK--------EGLLDIFMEAGA-IVMNPNC 275
Query: 448 GACLG 452
C G
Sbjct: 276 SVCWG 280
>gi|320354460|ref|YP_004195799.1| 3-isopropylmalate dehydratase large subunit [Desulfobulbus
propionicus DSM 2032]
gi|320122962|gb|ADW18508.1| 3-isopropylmalate dehydratase, large subunit [Desulfobulbus
propionicus DSM 2032]
Length = 428
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 195/393 (49%), Gaps = 33/393 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+TEKIF+ A + +PG N+ +++D++M H++ P I +V D +I
Sbjct: 4 TITEKIFA-AHLRDTPTPG-NMVLDIDVIMCHEITTP--IAIMDLMEKGMDRVCDPSRIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + I+RD+ NIK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPPKDSKTATQAKIMRDWARRHNIKDFFDIG----------RNGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P +L+ + G +P
Sbjct: 110 FIRPGNTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRAPKSLKIEVIGTLPK 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++AKD+IL II +++V G T +EF G ++ +SM RMTLCNM VEAG +GV D
Sbjct: 170 GVVAKDIILNIIKQLTVNGGTDMVIEFCGPVIDAMSMASRMTLCNMAVEAGATSGVCQPD 229
Query: 310 GTTFKYL----EDKTSLP------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T +YL +D+ + P + SD A + D+S L P V PD
Sbjct: 230 LVTAQYLWPFIQDEYASPEAAAQDFAKWRSDADAVYERVLTVDVSTLAPQVTYGFKPDLV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E + KID+VYIGSCT G+ ED AA + V LVPAT ++
Sbjct: 290 KDVTEMEGTKIDQVYIGSCTNGRIEDIREAAAIIKGKTIADSVRGILVPATPAIYSQALE 349
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF ++G +P+CGACLG
Sbjct: 350 --------EGLIKIFMDSGF-CVLNPTCGACLG 373
>gi|308272115|emb|CBX28723.1| 3-isopropylmalate dehydratase large subunit [uncultured
Desulfobacterium sp.]
Length = 429
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 193/395 (48%), Gaps = 37/395 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWV-NVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ +KIF +P ++++V +D + H++ P + +V+D +I
Sbjct: 4 TIAQKIFDSHIID---NPFEDIYVIRLDAVFCHEITTPIAINDLVSR--SKDRVFDTSRI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILR++ I F+DI GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTALQGKILREWARRHKINDFFDIG----------RNGVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG F G+G TD + G L P T++ + G+MP
Sbjct: 109 GFVRPGYTIIMGDSHTCTYGAFGAFGAGVGTTDLEVGILKGVCALGYPETIKINICGKMP 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
D + AKD+IL +IG I V+GAT K +EF G VE + M+ RMTLCNM +EAG G+
Sbjct: 169 DGVFAKDIILSVIGLIGVSGATNKVLEFSGPVVEDMGMDARMTLCNMAIEAGATCGICAP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D TT +YL +D + SD AS+ DI+ LEP+V + PD
Sbjct: 229 DMTTVEYLWDFIKNEYKTKDAAHNAFSKYCSDPDASYEKIIDHDITNLEPVVTFGYKPDK 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+E + KID+VYIGSCT G+ ED AAK+ + + + PAT ++
Sbjct: 289 VKPVKEMEGTKIDQVYIGSCTNGRIEDLRVAAKILKGNKISDSLRGIVSPATTDIYKQAL 348
Query: 419 TLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ F EAG C T +P+CGACLG
Sbjct: 349 DEGIIAD--------FLEAGFCVT--NPTCGACLG 373
>gi|284161907|ref|YP_003400530.1| homoaconitate hydratase family protein [Archaeoglobus profundus DSM
5631]
gi|284011904|gb|ADB57857.1| homoaconitate hydratase family protein [Archaeoglobus profundus DSM
5631]
Length = 415
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 196/384 (51%), Gaps = 28/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S K ++ GD V +D + D P + + E G K
Sbjct: 4 TIAEKILSEKSGK-EVYAGDLVVAKIDQIALQDGTAPLAIRRIR-ELGREVKAGKITHFF 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH + + ++R F E D+ D+G+ GV H + E
Sbjct: 62 I--DHASPPPRKELANDQKLIRSFAKEIG----ADMNDVGD--------GVIHQVMI-EK 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG++ +G DSHTCT GA G FATG+G+TD + GK +VP T R +DG +P
Sbjct: 107 HVCPGDLAVGADSHTCTYGALGAFATGMGSTDIAIAMVLGKNWFRVPETFRIQIDGSLPK 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL IIGE+ V GATYK++EF G T++ + M+ R+T+ NMVVE G K G+ D
Sbjct: 167 GVFAKDLILHIIGELGVDGATYKALEFHGETIKAIDMDSRLTMANMVVECGAKVGLFETD 226
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T ++L E ++ + +DE A++ E F +++EP++AKPH+ DN + + V
Sbjct: 227 DVTRRFLAEMGRENCFKKIKADEDANYEKELYFS-AEIEPMIAKPHNVDNVVPVSDVEGV 285
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
K+D+VY+G+CT G+ D AK+ V + PA+++V++ L
Sbjct: 286 KVDQVYVGTCTNGRLSDIEIVAKMLKGRRVHRDVRLLVCPASRRVYLKALEL-------G 338
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
I E G P P CG C+G
Sbjct: 339 YLKTIVEAGGVVLP--PGCGPCVG 360
>gi|261885126|ref|ZP_06009165.1| 3-isopropylmalate dehydratase large subunit [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 308
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 166/267 (62%), Gaps = 18/267 (6%)
Query: 193 PGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLL 252
PG+V++G DSHTCT GA G F+TG+G+TD + + TGK KVP T++ G+ ++
Sbjct: 1 PGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPATIKVEFVGKPAKHIY 60
Query: 253 AKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTT 312
KDLIL++I +I V GA YK++EF G ++ L M+ R +LCNM +EAGGK+G++ D T
Sbjct: 61 GKDLILEVIRQIGVDGALYKALEFCGDAMKYLDMDSRFSLCNMAIEAGGKSGIIAVDDIT 120
Query: 313 FKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDV 368
++LE K +L +P YSDE A++ R D+SKL+P++A P P N E D+
Sbjct: 121 KEFLESK-NLRSKPKFHYSDEGANYEQVLRIDVSKLDPVIAYPFLPSNGKSINEALKDDL 179
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVPGSG 426
KID+V+IGSCT G+ D AA++ GK+V T L+ PATQK+ + +
Sbjct: 180 KIDQVFIGSCTNGRLSDLRIAARIL--KGKRVAKHTRLIITPATQKIAL--------AAQ 229
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
+ IF EAG ++P+CGACLGG
Sbjct: 230 KEGLMDIFVEAGA-VVSNPTCGACLGG 255
>gi|239627591|ref|ZP_04670622.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47_FAA]
gi|239517737|gb|EEQ57603.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47FAA]
Length = 438
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 201/398 (50%), Gaps = 41/398 (10%)
Query: 66 KNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR 125
K+ T+ EK+ + + PGD V + D+ M HD+ P + +K K+ D
Sbjct: 8 KSGYTMAEKLLKNNAGLDHVQPGDIVITHPDMFMIHDIYTPYLYDTLEKMGA--GKIDDP 65
Query: 126 EKIVIIPDHYIFTS---DERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+K+ II DH + T+ ++ A+ N I + Y IK L + G+CH
Sbjct: 66 DKVTIIFDHCMPTAVAKNDYAHYNAGIA--------LAGKYGIKKLHIGQ------GICH 111
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ +E + +PG++ TDSHT T G G F +GIG + L TG++ KVP ++ V
Sbjct: 112 SIMHEERYAKPGQIATATDSHTTTYGGAGNFCSGIGTAEMAAALITGELWFKVPEAIKIV 171
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L+G + D +L+KD+IL+I+G+I G YKS+EF G +SM R T+ NM +EAG K
Sbjct: 172 LNGHLKDGVLSKDVILKILGDIRADGGQYKSLEFTGPAAREMSMMARFTVANMALEAGAK 231
Query: 303 NGVVPADGTTFKY----LEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
G+ AD T +Y LE+ + V DE A + +D+S LEP ++ P DN
Sbjct: 232 CGLFEADEKTAEYYGMALEE-----IDWVKVDEDAVYEKVLVYDVSGLEPQLSCPQGVDN 286
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
E K KID VYIGSCT G ED AA++ GKKV + +VPAT KV+ D
Sbjct: 287 VHPVSEVKGTKIDEVYIGSCTNGSLEDMRIAAEIM--EGKKVPDDLRVIVVPATNKVFKD 344
Query: 417 VYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
+ F EAGC + P CG C G P
Sbjct: 345 AIAAGY--------IRTFIEAGC-VISHPCCGLCCGMP 373
>gi|288932808|ref|YP_003436868.1| homoaconitate hydratase family protein [Ferroglobus placidus DSM
10642]
gi|288895056|gb|ADC66593.1| homoaconitate hydratase family protein [Ferroglobus placidus DSM
10642]
Length = 416
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 199/386 (51%), Gaps = 31/386 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI S S K + GD V VD + D P + +K G K
Sbjct: 4 TIAEKILSEKSGKDAYA-GDIVIAKVDRIALQDGTAPLAIKQVEK-LGLEVKAAKITHFF 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + ++++F + ++ N +G+ H L E
Sbjct: 62 V--DHAAPSPRKELSNDQKLIKEFAEKVGAEF------------NKPGEGIIH-QLMVER 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG++++G DSHTCT GA G FATG+G+TD + GK +VP + + V++GE
Sbjct: 107 YVNPGDLIVGADSHTCTYGALGAFATGMGSTDIAIAMALGKNWFRVPESFKIVVEGEFQK 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL IIGE+ V GATYK++EF G T+++L M+ R+T+ NM +E G K G+ +D
Sbjct: 167 GVFAKDLILWIIGELGVDGATYKALEFHGETIDKLDMDSRLTIANMAIECGAKAGLFKSD 226
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T K+L E + + DE A + E FD+S L P+VAKPH DN A E + V
Sbjct: 227 EVTKKFLMERGRGDKFREIKPDEDAEYEKEMYFDVSDLTPIVAKPHQVDNIARIDEVEGV 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
K+D+V++G+CT G+ D A++ G+KV V + PA+++V+M
Sbjct: 287 KVDQVFVGTCTNGRLSDLEVVARIL--KGRKVHKDVRLLVGPASREVYMKALERG----- 339
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+I + G P P CG C+G
Sbjct: 340 --YIQEIIKAGGVILP--PGCGPCVG 361
>gi|451948417|ref|YP_007469012.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfocapsa sulfexigens DSM
10523]
gi|451907765|gb|AGF79359.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfocapsa sulfexigens DSM
10523]
Length = 429
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 207/397 (52%), Gaps = 41/397 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KIF A + +P +N+ +++D+++ H++ P I +V+D KI
Sbjct: 4 TIAQKIFD-AHLRDTPTP-ENMVLDLDVVLCHEITTP--IAIMDLMEKGMDRVFDPNKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + I+R++ QNIK F+D+ + GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAAQGKIMREWAKRQNIKDFFDVGE----------NGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P +++ + G + +
Sbjct: 110 FIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCTFRAPVSMKVSISGILQN 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +I +++V GAT K +EF G V+ ++M RMTLCNM VEAG +G+ D
Sbjct: 170 GVSAKDVILAVIKKLTVNGATDKVIEFTGPLVDSMNMSARMTLCNMAVEAGATSGLCYPD 229
Query: 310 GTTFKYL-----EDKTSL-----PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T +YL +D T++ +E +SD A + S D+S+LEP V + PD+
Sbjct: 230 RVTAEYLWQFIKDDYTTIDAAVAKFEKWHSDADAEYASVIELDVSELEPQVTYGYKPDHV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF----LASGKKVKVPTFLVPATQKVWM 415
RE + +D++YIGSCT G+ ED AA + LASG V + PAT ++
Sbjct: 290 KNIREMEGTPVDQIYIGSCTNGRIEDLRQAAAILKGKRLASG----VRGIVTPATPGIYS 345
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ +IF +AG +P+CGACLG
Sbjct: 346 QALE--------EGIIKIFMDAGF-CVLNPTCGACLG 373
>gi|70606093|ref|YP_254963.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius DSM 639]
gi|449066294|ref|YP_007433376.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius N8]
gi|449068570|ref|YP_007435651.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius Ron12/I]
gi|76363221|sp|Q4JC09.1|LEUC_SULAC RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|68566741|gb|AAY79670.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius DSM 639]
gi|449034802|gb|AGE70228.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius N8]
gi|449037078|gb|AGE72503.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
acidocaldarius Ron12/I]
Length = 414
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 198/386 (51%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS K +SPGD + VD++ HD+ G + + + G KV+DREK+V
Sbjct: 4 TLTEKILSRASGK-NVSPGDVTEIKVDLVAFHDLTGYHVIEVME-DVG-TLKVFDREKLV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH D R+ +R+F + ++ FYDI G+ H + E
Sbjct: 61 IAFDHLAPPPDVRSAEIQGQIRNFVKKTSVPNFYDIN-----------SGILH-QIMIER 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT T+GA G FA G+G +D + TGK + VP + L+G+
Sbjct: 109 YANPGQVIVAADSHTSTSGAVGAFAQGLGASDVAAAVITGKTWVMVPQPFKITLEGKPAR 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+I+G+ S+E + M+ R T+ NM +E + D
Sbjct: 169 WINGKDIALKILGDFKADYFNGMSLEIFVKEPSAVPMDFRATVSNMGIEMNADALMFVPD 228
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
TF Y+ KT+ YEP V D A ++ EY D+SKL+PLVA PHS DN E +
Sbjct: 229 QETFNYI--KTARGYEPQMVTPDSDAKYVDEYNIDLSKLDPLVAAPHSVDNVKSVNEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+D+V+IGSCT G+ D AAK+ GKKVK T ++PA+ +++ L
Sbjct: 287 TPVDQVFIGSCTNGRISDLEMAAKIL--KGKKVKTRTIVIPASYQLFKKALEL------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
Q +AG +CG CLGG
Sbjct: 338 -GYVQTLADAGAIITYG-TCGPCLGG 361
>gi|239626878|ref|ZP_04669909.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47_FAA]
gi|239517024|gb|EEQ56890.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47FAA]
Length = 419
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 34/391 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M EKI ++ S + + G+ + +D +D+ + + E G KVWD +
Sbjct: 1 MHAIEKILAKNSGRTHVKTGEIITAKIDFAEINDLYLQTIYSFY--EMG-GEKVWDNTRA 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DHY D ++ N +R+F + +KY +D GVCH + +
Sbjct: 58 AFVFDHYAPAPDIKSAANHGEMREFARKNQLKYHFDTN-----------CGVCHQVMPEA 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG +++ TDSHT T GAFG TG G TD +L TG++ +VP + L+G+ P
Sbjct: 107 GVIYPGMIIVATDSHTTTHGAFGTMGTGCGATDMATILMTGELWFRVPEIIEVRLEGQAP 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+IL ++G I GA YK+++F G+ V+ L++ RM +CNM VE G K +
Sbjct: 167 KGVFPKDVILNVLGRIKADGAVYKAIDFTGSYVDSLNVAGRMVICNMAVEMGAKTAYMQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--- 365
+ Y+ + P+E +D + + FD+S LEP +A PHS DN
Sbjct: 227 NQDVLDYVSKRAVRPFEVQVTDPGFEYSERHVFDVSGLEPQLACPHSVDNVDTLSHVIAE 286
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF----LVPATQKVWMDVYTLP 421
++K+++ YIGSCTGG+ ED AA++ K +P + +VPA+ +V +
Sbjct: 287 GEMKLNQGYIGSCTGGREEDIAVAARIV----KGRHIPPYSRLVVVPASSEVMLSCME-- 340
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
K Q AG T +P CGACLG
Sbjct: 341 ------KGYIQDLMNAGA-TITTPGCGACLG 364
>gi|347524421|ref|YP_004781991.1| 3-isopropylmalate dehydratase [Pyrolobus fumarii 1A]
gi|343461303|gb|AEM39739.1| 3-isopropylmalate dehydratase [Pyrolobus fumarii 1A]
Length = 422
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 215/386 (55%), Gaps = 28/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T EK+FS + + ++SPG+ V V+VD++ D P + + ++EFG +V ++ +
Sbjct: 5 TFVEKLFSLRTGR-RVSPGEIVVVDVDVVYAQDGTAPLAIRVMREEFGVE-RVAKPDRTL 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH +S+ + ++R+F I+ YD+ G+ H + +EG
Sbjct: 63 FFIDHVSPSSNPDTSALHRLMREFAARHGIR-LYDVG-----------MGISHQVVFEEG 110
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHT T GA G FATG+G+TDA + +G++ +VP +R L G +
Sbjct: 111 WVVPGAVVVGADSHTVTGGAVGAFATGVGSTDAAAAMVSGRLWFRVPEAIRVWLRGSLSG 170
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+L KD+ L+++ + +GA+YKS+EF G V+ LS+ R+T+ NM VE G KN P D
Sbjct: 171 PVLGKDVALKLLSILGSSGASYKSLEFWGDGVKSLSLASRLTIANMSVEMGAKNAYFPPD 230
Query: 310 GTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
F++L + +P P+Y D A + E ++ K+EP+VA P +P N E + +
Sbjct: 231 ERVFEHLRNVGAKVPVRPIYPDPDAVYSDEIEVELDKVEPMVALPPNPSNAKPVTEVEGL 290
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSG 426
++D+V+IGSCT G+ EDF AAA+V G+KV +V VPA+++V+M++
Sbjct: 291 EVDQVFIGSCTNGREEDFEAAARVL--KGRKVHPRVRCIAVPASRRVYMNLLK------- 341
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ I EAGC S +CG C+G
Sbjct: 342 -RGIIDILVEAGCIVTHS-TCGPCVG 365
>gi|305664164|ref|YP_003860452.1| 3-isopropylmalate dehydratase [Ignisphaera aggregans DSM 17230]
gi|304378733|gb|ADM28572.1| 3-isopropylmalate dehydratase [Ignisphaera aggregans DSM 17230]
Length = 418
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 202/388 (52%), Gaps = 30/388 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEF-GENAKVWDREK 127
M L ++I S+A + ++PG+ V +D + D P + +KE + + W+R
Sbjct: 1 MGLIDRIISKAIGR-DVTPGEIVVTEIDAIYAQDGTAPLVINVIEKELNADRLEAWNRTY 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
I DH A +R FC + NIK F D+G G+ H + +
Sbjct: 60 FFI--DHSSPAPHVAAATVHREMRRFCRKFNIKLF----DVG--------YGISHQVVVE 105
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G RPG +++G DSHT T GA G +A G+G+TDA + GK +KVP T R L G++
Sbjct: 106 DGIVRPGMIVIGADSHTPTIGALGIYALGVGSTDAAIGIVYGKTWIKVPETFRIRLIGKV 165
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
P +++KD+IL IIG + G +++EF G T++ LS++ RMTL NM E ++ ++P
Sbjct: 166 PRGVMSKDIILSIIGTVGSDGMIGRAVEFHGDTIKELSIDARMTLTNMCTEMSAESAIIP 225
Query: 308 ADGTTFKYLEDKTSLPYEPV-YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D ++LE Y V YS F+ E ++ K+ P+V+ P DN E +
Sbjct: 226 LDERAIQWLESNGYSIYRYVDYSPSSKDFVDEMDVEVQKIGPVVSAPPDVDNVKSVAEVE 285
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
++ID+V+IGSCT G+ ED AA++ G+KV+ + + PA++K++++
Sbjct: 286 GIEIDQVFIGSCTNGRLEDLEIAARIM--KGRKVREGIRCIVSPASRKIYLEALR----- 338
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ I EA C A P+CG C+G
Sbjct: 339 ---RGIIDILTEANC-VIAPPTCGPCVG 362
>gi|224368905|ref|YP_002603067.1| 3-isopropylmalate dehydratase large subunit [Desulfobacterium
autotrophicum HRM2]
gi|223691622|gb|ACN14905.1| LeuC1 [Desulfobacterium autotrophicum HRM2]
Length = 437
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 194/395 (49%), Gaps = 37/395 (9%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + +KP GD V +N+D + H++ P + G++ +V+DR KI
Sbjct: 4 TIAEKIFDAHTVDKPG---GDIVVINLDAVFCHEITTPIAINDLVAR-GKD-RVFDRSKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + LRD+ IK F+DI GVCH ++
Sbjct: 59 KAVIDHVTPAKDSKTALQGKTLRDWAKRHEIKDFFDIG----------RNGVCHAIFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G K P +++ + G +
Sbjct: 109 GFVRPGYTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFKKPFSMKVEISGTLG 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL II I V GAT + MEF G V+ ++MEERMTLCNM VEAG +G+ P
Sbjct: 169 AGVYAKDVILSIIKTIGVNGATDRVMEFSGPVVDHMTMEERMTLCNMAVEAGATSGICPP 228
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T YL +D + D A + + D++ L P V PD
Sbjct: 229 DRVTVDYLWRFIKDDYSSKDAAFEAFMAFAPDADAVYADTLKIDVTTLSPQVTFGFKPDQ 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
E ID+VYIGSCT G+ ED AA++ V + PAT +++
Sbjct: 289 VRSVAEMAGTPIDQVYIGSCTNGRIEDLRIAAQILKGKTISPDVRAIVSPATP----EIF 344
Query: 419 TLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
++ + KT F +AG C T +P+CGACLG
Sbjct: 345 SMALEEGLIKT----FMDAGFCVT--NPTCGACLG 373
>gi|300087474|ref|YP_003757996.1| 3-isopropylmalate dehydratase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527207|gb|ADJ25675.1| 3-isopropylmalate dehydratase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 417
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 204/392 (52%), Gaps = 35/392 (8%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFG--ENAKV 122
VKN LT++I S + ++PGD V VD + D GP + +EF + K+
Sbjct: 2 VKN---LTQRILSTKTGG-DVAPGDIVVSPVDWALVQDTTGP----LTVREFLGLDLPKL 53
Query: 123 WDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+ ++ DH + ++ + + LR F + Y + D+G +GVCH
Sbjct: 54 ANPAHTILFIDHAAPSPQKQLSCDHTFLRKFARD----YGAVLSDVG--------EGVCH 101
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+A++ + RPG+V++G DSHT TAG G FATG+G++D G GK +VP ++
Sbjct: 102 QIMAEK-YARPGDVIVGADSHTVTAGGLGAFATGMGSSDVAAAFGLGKTWFRVPESILVK 160
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L G + + + AKD+IL +IG I GATYK++EF G V +S+ +R+T+ NM VEAG K
Sbjct: 161 LTGRLQNNVTAKDIILHLIGLIGADGATYKALEFGGDGVTVMSVSDRLTIANMAVEAGAK 220
Query: 303 NGVVPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
G+ P+D T +YLE Y+P+ +D A++ D+S L P VA+PH+ DN A
Sbjct: 221 VGLFPSDEKTREYLEGLGRGQDYQPLTADNGAAYEKVIDIDLSSLAPTVARPHTVDNTAT 280
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
E +ID+V+IG+CT G+ D AA + + + + PA+ +V +
Sbjct: 281 VSELAGTRIDQVFIGTCTNGRLSDLKQAADILKGHRRHPDIRLLVAPASPQVML------ 334
Query: 422 VPGSGGKTCS-QIFEEAGCDTPASPSCGACLG 452
+G K Q EAG P C CLG
Sbjct: 335 ---AGMKMGYIQTLVEAGA-VILPPGCAGCLG 362
>gi|284173138|ref|ZP_06387107.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
solfataricus 98/2]
Length = 415
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + +K KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + K+EPLVA PHS DN
Sbjct: 220 NADALMFVPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDKMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCITIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|374996189|ref|YP_004971688.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus orientis
DSM 765]
gi|357214555|gb|AET69173.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfosporosinus orientis
DSM 765]
Length = 428
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 190/394 (48%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIF + + + D + +D + H++ P + + +V+D KI
Sbjct: 4 TIAEKIFD--AHRVDMPFPDTHVLKLDRVFCHEITTPIAITDLMARGMD--RVYDPTKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILRD+ IK F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAEQGKILRDWAKRHGIKDFFDI----------GRNGVCHAIFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G P T++ VL G +
Sbjct: 110 FVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFHFPKTIKIVLKGTLQP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDLIL II E++V GAT +EF G V+ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDLILFIIKELTVNGATNMVIEFTGPVVDAMSMESRMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYLED----------KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT YL D + Y SD A++ Y +D++ L P+ + PD
Sbjct: 230 MTTVNYLWDFIKDEFSTKEEALQEYSKWTSDADAAYEKVYEYDVTDLGPMATFGNKPDQV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E ID+VYIGSCT G+ ED AA + V + PAT ++
Sbjct: 290 KTVAEMSGTAIDQVYIGSCTNGRIEDLRIAASILKDKKISDDVRAIVSPATPA----IFN 345
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + + +IF+ AG C T +P+CGACLG
Sbjct: 346 MALK----EGLIEIFQNAGFCVT--NPTCGACLG 373
>gi|384432814|ref|YP_005642172.1| 3-isopropylmalate dehydratase [Sulfolobus solfataricus 98/2]
gi|261600968|gb|ACX90571.1| 3-isopropylmalate dehydratase [Sulfolobus solfataricus 98/2]
Length = 415
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + +K KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + K+EPLVA PHS DN
Sbjct: 220 NADALMFVPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDKMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|390454428|ref|ZP_10239956.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus peoriae
KCTC 3763]
Length = 421
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 205/394 (52%), Gaps = 41/394 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---E 126
TL EK+ + + + L+PGD V D M HD+ + F K ++ V E
Sbjct: 4 TLAEKLLMKNTGEKSLAPGDIVIARPDRYMIHDI-----YTSFLKRALKDMHVTKAVYPE 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGN-FKANPDYKG--VCHI 183
+ VII DH + T+ ++ + +F D +L F+ +KG +CH
Sbjct: 59 RGVIIFDHLMPTNQ--------------VDTDPIHFVDGLELAEKFQIKNVHKGEGICHS 104
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
+ + + RPGE+++ TDSHT T G G F TGIG+T+ V+ TG+V LKVP ++ VL
Sbjct: 105 LMHELRYARPGEIVVATDSHTTTYGGAGCFCTGIGHTEMAAVMATGEVWLKVPSAIKIVL 164
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
DG+ + AKD+IL+I+G+I G YKS+EF G V +S++ R T+ NM +EAG K
Sbjct: 165 DGDFQKGVGAKDIILKILGDIKSDGGQYKSLEFTGNAVRNMSIQSRFTIANMALEAGAKV 224
Query: 304 GVVPADGTTFKYLE-DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
G+ AD T +Y + D + + + DE A + R+D+S+LEP ++ P DN
Sbjct: 225 GLFEADEKTAEYYDMDYKDISWLKI--DEDAEYEQVLRYDVSELEPQLSCPQGVDNVHPI 282
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
E + K+++VYIGSCT G ED AAK+ GKK+ + ++PAT V+ +
Sbjct: 283 SEIEGTKLNQVYIGSCTNGSIEDMEMAAKIL--EGKKIASFLKMIVIPATINVYKEALE- 339
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
Q F +AG + P CG C G P
Sbjct: 340 -------HGYIQTFIDAGASV-SHPCCGLCCGQP 365
>gi|229578079|ref|YP_002836477.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
Y.G.57.14]
gi|229583292|ref|YP_002841691.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
Y.N.15.51]
gi|228008793|gb|ACP44555.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus Y.G.57.14]
gi|228014008|gb|ACP49769.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus Y.N.15.51]
Length = 415
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + +K KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D L TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAALITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|15899213|ref|NP_343818.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus
solfataricus P2]
gi|22001781|sp|Q97VY2.1|LEUC_SULSO RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|13815772|gb|AAK42608.1| 3-isopropylmalate dehydratase, large subunit (isopropylmalate
isomerase) (alpha IPM isomerase) (IPMI) (leuC)
[Sulfolobus solfataricus P2]
Length = 416
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + +K KV+D+
Sbjct: 3 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKS 59
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 60 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 108
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D L TGK L VP + VL+G+
Sbjct: 109 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAALITGKTWLVVPQPFKVVLEGK 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 168 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 220
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 221 NADALMFIPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 280
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 281 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 338
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 339 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 363
>gi|365854909|ref|ZP_09394972.1| putative homoaconitate hydratase [Acetobacteraceae bacterium
AT-5844]
gi|363719661|gb|EHM02962.1| putative homoaconitate hydratase [Acetobacteraceae bacterium
AT-5844]
Length = 428
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+T+T+KI + + G V V D+++ +DV GP +F F + +D E
Sbjct: 2 TGLTVTQKIIAAHTADGTAPAGGIVTVRPDVVLLNDVSGPLAFEQFDAMGAP--RPFDPE 59
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+IV++ DH+ D A + + + F + I+++YD P G+ H LA
Sbjct: 60 RIVLVADHFAPAPDITAAGAIAMTQGFARKHGIRHYYD----------PGRGGIEHTLLA 109
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ G G ++ G DSHTCTAGAF G G+TD L G++ ++VP ++R L G+
Sbjct: 110 ELGMVGHGSIVFGADSHTCTAGAFNALGMGFGSTDLAGALAMGQLWMRVPDSIRVELVGK 169
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
Y+ KD+IL++I I GA S+EF G + L M+ RM + NM VE G V
Sbjct: 170 PGAYVTGKDVILELIRRIGSDGAADASLEFGGPALAVLPMDARMAIANMAVEGGADTCVF 229
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D + + + + PV +D A + D+ L PLVAKP SP + +
Sbjct: 230 DGDAQSTEDMVRRGVPAAPPVLADADAVYRQVITIDLGTLSPLVAKPPSPASGVAVETLR 289
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPG 424
K+D+VY+G+C+ G D A++ G++V V +VPATQK+W
Sbjct: 290 GQKVDQVYVGNCSNGTITDLRQVAEIL--RGRRVADGVRMVVVPATQKIWRQALA----- 342
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ I EAG ++P+CGAC GG
Sbjct: 343 ---EGLLDIIAEAGAAV-STPTCGACFGG 367
>gi|381180825|ref|ZP_09889662.1| 3-isopropylmalate dehydratase, large subunit [Treponema
saccharophilum DSM 2985]
gi|380767181|gb|EIC01183.1| 3-isopropylmalate dehydratase, large subunit [Treponema
saccharophilum DSM 2985]
Length = 428
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 176/343 (51%), Gaps = 31/343 (9%)
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
+V+D KI + DH D + ILRD+ N+K F+DI AN GV
Sbjct: 51 RVFDPTKIKAVIDHVTPAKDSKTATQGKILRDWARRNNVKDFFDIG------AN----GV 100
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH ++G RPG ++ DSHTCT GAFG FA G+G TD + G + P T++
Sbjct: 101 CHAIFPEKGFVRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCSFREPKTVK 160
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
F+L+G++ + + AKD+IL +IG+I V GAT +EF G V+ + MEERMTLCNM +EAG
Sbjct: 161 FILNGKLKEGVYAKDVILHLIGKIGVNGATNCVVEFTGPVVDAMGMEERMTLCNMAIEAG 220
Query: 301 GKNGVVPADGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLV 350
G +G+ D T YL ++ Y D+ A + D+S LEP+
Sbjct: 221 GTSGICFPDEKTVDYLWEFIKDEYGTKEAALADYAKWRDDDDAKYEKVITEDLSDLEPVC 280
Query: 351 AKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
+ PD E K K+D+VYIGSCT G+ D AA V V + PAT
Sbjct: 281 TINYKPDQIKKISEMKGTKVDQVYIGSCTNGRISDLRIAAAVLKGHHLADGVRGIVSPAT 340
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
K +Y + V + F EAG C T +P+CGACLG
Sbjct: 341 PK----IYKMAV----AEGIIDTFLEAGFCVT--NPTCGACLG 373
>gi|227829308|ref|YP_002831087.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
L.S.2.15]
gi|284996666|ref|YP_003418433.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus L.D.8.5]
gi|227455755|gb|ACP34442.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus L.S.2.15]
gi|284444561|gb|ADB86063.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus L.D.8.5]
Length = 415
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 200/394 (50%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + +K KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D L TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAALITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELGGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|385772286|ref|YP_005644852.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus HVE10/4]
gi|323476400|gb|ADX81638.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus HVE10/4]
Length = 415
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + ++ KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DISPGDVIEAKVDLVAFHDLTGYHVIEVMER--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVIPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|385775001|ref|YP_005647569.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus REY15A]
gi|323473749|gb|ADX84355.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus REY15A]
Length = 415
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + ++ KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DISPGDVIEAKVDLVAFHDLTGYHVIEVMER--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVIPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|238618754|ref|YP_002913579.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
M.16.4]
gi|238379823|gb|ACR40911.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus M.16.4]
Length = 415
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + ++ KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DISPGDVIEAKVDLVAFHDLTGYHVIEVMER--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIVTYG-TCGPCLGG 362
>gi|227826668|ref|YP_002828447.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
M.14.25]
gi|229583832|ref|YP_002842333.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus islandicus
M.16.27]
gi|227458463|gb|ACP37149.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus M.14.25]
gi|228018881|gb|ACP54288.1| 3-isopropylmalate dehydratase [Sulfolobus islandicus M.16.27]
Length = 415
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+A TLTEKI SRAS K +SPGD + VD++ HD+ G + ++ KV+D+
Sbjct: 2 SAKTLTEKILSRASGK-DISPGDVIEAKVDLVAFHDLTGYHVIEVMER--ANMIKVFDKS 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K+VI DH D R+ +R F + I FYDI N+ G+ H +
Sbjct: 59 KLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDI----NY-------GILHEVMI 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + PG+V+L DSHT T+GA G FA G+G +D + TGK L VP + VL+G+
Sbjct: 108 EQ-YANPGQVILAADSHTTTSGAVGAFAQGMGASDIAAAVITGKTWLVVPQPFKVVLEGK 166
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEA 299
++ KD+ L+++G+ +K+ F G T+E M+ R T+ NM +E
Sbjct: 167 PAKWITGKDVALKLLGD-------FKADYFNGMTLEIFVKDPLSFPMDYRATVSNMGIEM 219
Query: 300 GGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ D T +Y+++ E V D A ++ EY + ++EPLVA PHS DN
Sbjct: 220 NADALMFIPDQETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNV 279
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
+ E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ +
Sbjct: 280 KVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE 337
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ Q +AGC +CG CLGG
Sbjct: 338 --------RGYIQTLVDAGCIITYG-TCGPCLGG 362
>gi|158523169|ref|YP_001531039.1| 3-isopropylmalate dehydratase large subunit [Desulfococcus
oleovorans Hxd3]
gi|226735958|sp|A9A043.1|LEUC_DESOH RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|158511995|gb|ABW68962.1| homoaconitate hydratase family protein [Desulfococcus oleovorans
Hxd3]
Length = 431
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 193/396 (48%), Gaps = 39/396 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KIF S G+ + +D + H++ P + ++ +V+D KI
Sbjct: 4 TIAQKIFDAHSVDQPF--GEVHVIRLDGVFCHEITTPTAICDLMEK--NKDRVFDPSKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILR + I F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDSKTAAQGKILRQWARRHGIDGFFDI----------GRNGVCHALFPEQG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G L P T++ VL+G++
Sbjct: 110 FVRPGHTIIMGDSHTCTYGAFGAFAAGVGTTDLEVGILKGVCALNYPSTIKVVLNGKLSP 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL +I E+ V GAT + +EF G V+ +SME RMTLCNM +EAGG G+ D
Sbjct: 170 GVYAKDVILAVIAELGVNGATNRVIEFTGPCVDAMSMEARMTLCNMAIEAGGTCGICYPD 229
Query: 310 GTTFKYLED--KTSLP--------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
TT YL + K P ++ + SD A + DIS L P V + PD
Sbjct: 230 KTTVAYLWEFIKGEYPSRQAALKAFKKLVSDPDADYDRVLEMDISDLSPRVTYGYKPDCV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDV 417
E + ID+VYIGSCT G+ ED AAKV GKKV V + PAT V+
Sbjct: 290 KPVAEMEGTPIDQVYIGSCTNGRLEDLRVAAKVL--KGKKVHPSVRGIVSPATPTVFQAA 347
Query: 418 YTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + F AG C T +P+CGACLG
Sbjct: 348 LEEGLIAT--------FMAAGFCVT--NPTCGACLG 373
>gi|389578949|ref|ZP_10168976.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfobacter postgatei
2ac9]
gi|389400584|gb|EIM62806.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Desulfobacter postgatei
2ac9]
Length = 428
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 203/398 (51%), Gaps = 43/398 (10%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + +KP GD + +D + H++ P + G++ +V+D +KI
Sbjct: 4 TIAEKIFDAHLVDKPF---GDVSVLRLDRVFCHEITTPIAIQDLVAR-GKD-RVFDPDKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILRD+ + IK F+DI GVCH ++
Sbjct: 59 KAVIDHVSPAKDSKTAMQGKILRDWALRHGIKDFFDIG----------RNGVCHALFPEK 108
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G K P T + + G +
Sbjct: 109 GFVRPGFTIIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCTFKQPETFKIEITGTLR 168
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL++IG+ISV GAT +EF G V+ + M++RMTL NM VEAG +G+
Sbjct: 169 PGVYAKDIILEVIGQISVNGATNMVIEFTGPVVDAMGMDQRMTLANMAVEAGATSGICLP 228
Query: 309 DGTTFKYL----EDKTSLP------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D TT +YL +D+ P Y SD A + D++ LEP+V PDN
Sbjct: 229 DMTTVQYLWPFIKDEFESPEEALAQYSRFSSDPDAVYAKTKTIDVTSLEPMVTFGFKPDN 288
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFL-AAAKVFLASGKKVK--VPTFLVPATQKVWM 415
+ +D+VYIGSCT G+ ED AAA+V +GKK+ V + PAT ++
Sbjct: 289 VKPVSQMTGTHVDQVYIGSCTNGRLEDLREAAAEV---AGKKISPGVRAIVSPATPDIFK 345
Query: 416 DVYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ +IF +AG C T +P+CGACLG
Sbjct: 346 AALD--------EGLIKIFMDAGFCVT--NPTCGACLG 373
>gi|282857830|ref|ZP_06267037.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
gi|282584327|gb|EFB89688.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
Length = 416
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 188/386 (48%), Gaps = 27/386 (6%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M TEKI + + + ++ G+ V VD+ +D+ F E G V + +
Sbjct: 1 MHATEKILAAHAGRASVAAGEIVNCTVDVAGINDLYLQTVRSFF--EIG-GVTVHSPQNV 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V+ DHY S + N R+FC QNI D+ + GVCH +
Sbjct: 58 VMFLDHYAPASSIQQADNQKQFREFCDAQNIANLMDVNE-----------GVCHQICVDK 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG +++ TDSHT T GA G F TG+G TD +L +G++ +VP ++ VLDG
Sbjct: 107 GFSRPGRLMVITDSHTTTHGALGAFGTGVGATDMAAILISGQLWFRVPEVIKIVLDGAPR 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD IL +IG + YK +EF G V + + ER+TLCNM E G K +
Sbjct: 167 KGVFAKDAILHVIGALGADYGVYKVIEFCGEAVADMPLSERLTLCNMTTEIGAKTAWIQP 226
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D TF ++E Y +D + +E+RFD+ LE +A+P S DN
Sbjct: 227 DEITFAHMERLGVGDYVVYETDPDYRYAAEHRFDLGALESQIAEPDSVDNVHPISHGAGT 286
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVPGSG 426
KI + ++G+CTGG+ ED AA++ G+KV T +VPA++K ++ V
Sbjct: 287 KIQQAFLGTCTGGRFEDLEIAARI--VKGRKVPRGTRFVVVPASRKTLLEAVKSGV---- 340
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ EAG T +P C ACLG
Sbjct: 341 ----METLVEAGA-TFVTPGCAACLG 361
>gi|15920819|ref|NP_376488.1| 3-isopropylmalate dehydratase large subunit [Sulfolobus tokodaii
str. 7]
gi|22001777|sp|Q974R0.1|LEUC_SULTO RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|342306258|dbj|BAK54347.1| homoaconitase/3-isopropylmalate dehydratase large subunit
[Sulfolobus tokodaii str. 7]
Length = 415
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 193/386 (50%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS K ++PGD V V VDI HD+ G + +K KV+D++KIV
Sbjct: 4 TLTEKILSRASGK-SVAPGDVVEVKVDIAAFHDLTGYHVIEVMEK--AGMLKVFDKQKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH D R+ +R F E I F+DI G+ H L E
Sbjct: 61 IAFDHLAPPPDVRSAEIQTQIRKFVKELKIPNFHDIN-----------VGILHQILL-EK 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG V++ DSHT T+GA G FA G+G +D + TGK + VP + + +L+G+
Sbjct: 109 YANPGYVIVAADSHTTTSGAVGAFAQGLGASDVAAAVITGKTWVMVPQSFKIMLEGKPGK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+I+G+ S+E M+ R T+ NM +E + D
Sbjct: 169 WINGKDVALKILGDFKADYFNGMSIEIFVREPSAFPMDFRATVSNMGIEMNADALMFVPD 228
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T Y+ KT+ YEP V DE A ++ EY D+ KLEPLVA PHS DN E +
Sbjct: 229 EETVNYI--KTNRGYEPNIVRPDEGAKYVDEYTIDLGKLEPLVAAPHSVDNVKTVNEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ +D+V+IGSCT G+ DF AAK+ GK+VK +PA+ ++ L
Sbjct: 287 LDVDQVFIGSCTNGRISDFEIAAKIL--KGKRVKSRCIAIPASYDLFKKAMEL------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ AGC +CG CLGG
Sbjct: 338 -GYIETLVNAGCIVTYG-TCGPCLGG 361
>gi|385675152|ref|ZP_10049080.1| homoaconitate hydratase family protein [Amycolatopsis sp. ATCC
39116]
Length = 422
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 181/350 (51%), Gaps = 20/350 (5%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDV---CGPGSFGIFKKEFGENAKVW 123
A T +K RAS + L PG V D+ M+H C I E ++++
Sbjct: 2 TAKTFAQKALERASGETDLDPGQIVDAYPDLYMSHTASWRC------IRTLERMGVSELY 55
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
D ++I ++ DH + + + R+F + ++ F+D+ G+ HI
Sbjct: 56 DVDRIAMVMDHISPAQTAKTAADHQLCREFAAKMGVRNFFDVN-----------AGIAHI 104
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L ++G +PG++++GTDSH+ GA G F TG+G ++ TGK+ +KVP ++R +
Sbjct: 105 VLMEKGLIKPGQLVIGTDSHSTIYGALGAFGTGVGFSEITAAWVTGKLWMKVPQSIRIDV 164
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
DGE+P KD++L++IG++ GATY S+EF G+ +S+ ERMT CN+ +E G KN
Sbjct: 165 DGELPPGTYPKDVMLRLIGDLGADGATYCSVEFGGSFTGAMSVSERMTFCNLAMEMGAKN 224
Query: 304 GVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
V D TT YL++ + Y+ + D A + + D S L+P VA PH+ DN
Sbjct: 225 AFVAPDPTTLAYLDEAGAGDYDVLLPDPGARYERQLTVDASTLQPQVAVPHTVDNVVGVD 284
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKV 413
E K+++V+IGSC K +D AA+V V + PA+ V
Sbjct: 285 EVAGTKVNQVFIGSCANAKYDDLAIAARVLAGHRVADGVRLIVTPASATV 334
>gi|159041732|ref|YP_001540984.1| 3-isopropylmalate dehydratase large subunit [Caldivirga
maquilingensis IC-167]
gi|189046469|sp|A8MDY8.1|LEUC_CALMQ RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|157920567|gb|ABW01994.1| 3-isopropylmalate dehydratase [Caldivirga maquilingensis IC-167]
Length = 415
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 196/388 (50%), Gaps = 32/388 (8%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN---AKVWDR 125
+TLTEKI S+A+ + Q+SPGD + VD+ HD+ G E EN KVWD
Sbjct: 3 LTLTEKILSKAAGR-QVSPGDVTEITVDLAAFHDLTGHHVV-----EVMENIGAVKVWDL 56
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
++ VI DH ++RA LR F N++ F+D+ D G+ H L
Sbjct: 57 DRFVIAFDHLAPPPNDRAAEIQVKLRKFAKSINVRNFHDVGD-----------GILH-QL 104
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
E + PG+V++ DSHT T GA G FA G+G +D +L TGK L +P L
Sbjct: 105 LLEKYALPGQVVMAADSHTTTVGAVGAFAQGMGASDMAAILMTGKTWLMIPEPFLIRLIN 164
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E + KD+ L I+ G KS+E + M+ R T+ NM VE G +
Sbjct: 165 EPAPGVYGKDVALHILSVFKAEGLNGKSVELQVEKPKAFPMDYRATVSNMGVEFGADAAI 224
Query: 306 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T YL + +P+ D A ++ EY +++KLEPLVA PHS DN E
Sbjct: 225 FIPDEETVSYLSRSRGINVKPITPDPDAKYVDEYTIELNKLEPLVAAPHSVDNVKPVSEV 284
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
+ +++D V+IGSCT G+ D AAA++ L +G KVK ++PA++ D++T +
Sbjct: 285 EGIEVDYVFIGSCTNGRLSDLEAAARI-LKNG-KVKARCIVIPASR----DLFTKALDAG 338
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLGG 453
+T ++ AGC +CG CLGG
Sbjct: 339 YVETLTK----AGCVVTYG-TCGPCLGG 361
>gi|156743455|ref|YP_001433584.1| 3-isopropylmalate dehydratase [Roseiflexus castenholzii DSM 13941]
gi|156234783|gb|ABU59566.1| 3-isopropylmalate dehydratase [Roseiflexus castenholzii DSM 13941]
Length = 410
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 198/417 (47%), Gaps = 48/417 (11%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EK+ S + + Q+ + V +D M D P + F++ G ++WD ++V
Sbjct: 4 TIAEKVVSHHAGR-QVMANEIAIVAIDGAMATDATAPLAIKAFREMGG--VRLWDPSRVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH +E+ + ++R F E YD+ + G+CH + +
Sbjct: 61 LVIDHAAPAPNEQVSNLHALMRAFGREMGC-VLYDVGE-----------GICHQLMVEYD 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H RPG+++LG DSHT T GA G FA G+G+TD TGK LK P +++ VLDG +
Sbjct: 109 HVRPGQIILGADSHTPTYGALGAFAMGVGSTDLAAAWLTGKTWLKTPASIKIVLDGTLRT 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKDL+L ++ +I GA Y+++EF G+ + LS+ RMTL NM E G V
Sbjct: 169 GVSAKDLVLFLVRQIGADGARYQAVEFTGSAIRSLSLASRMTLANMTAEMGALTAFVDLQ 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
G Y ++P++ D A + Y F++ L P VA PH+P N E
Sbjct: 229 GLDLPYR-------FDPIHPDPDAVYSVVYSFNVDHLLPQVAIPHAPSNVVPIDEVAGTP 281
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVY---TLPVPG 424
I +IGSCT + ED AAA V G+K+ V + PA+++V+M T+
Sbjct: 282 IQMAFIGSCTNSRLEDLRAAAAVL--QGRKLAPGVRLIIAPASRQVFMMALQDGTIATLT 339
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLGGP-----------KDTYARMNEPMASLCL 470
G T F AGC P G G P ++ RM P AS+ L
Sbjct: 340 ESGAT----FITAGC----GPCVGTHQGIPGNGENVITSTNRNFRGRMGNPHASIYL 388
>gi|227499094|ref|ZP_03929231.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus sp.
D21]
gi|352684472|ref|YP_004896457.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus
intestini RyC-MR95]
gi|226904543|gb|EEH90461.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus sp.
D21]
gi|350279127|gb|AEQ22317.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus
intestini RyC-MR95]
Length = 598
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 198/392 (50%), Gaps = 29/392 (7%)
Query: 66 KNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR 125
+ TL EKI + + ++ PGD V + D LM HD+ P E G ++ D
Sbjct: 181 RKGFTLAEKILRKNAGVEEVKPGDIVVTHPDFLMIHDIYTPYLLDTLH-EMG-TKEIDDP 238
Query: 126 EKIVIIPDHYIFTSDERANR-NVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
+K+ I+ DH + T+ + + + D E IK + +G +G+CH
Sbjct: 239 DKVCIVFDHCMPTAVAKNDSAHYDAGLKLAEEYGIKKLH----IG--------EGICHSL 286
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ ++ + +PGEV TDSHT T G G F +GIG + L TG++ KVP ++ VL+
Sbjct: 287 MHEKFYAKPGEVQSATDSHTTTYGGAGCFCSGIGTAEMAAALTTGELWFKVPSAIKVVLN 346
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G P + +KD+IL+I+G+I+ +GA YKS+EF G +S++ R T+ NM +EAG K G
Sbjct: 347 GHFPKGVFSKDIILRILGDITASGAQYKSLEFTGPAAREMSLDARFTVANMALEAGAKCG 406
Query: 305 VVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
+ AD T Y S + + D++A + +D+S LEP ++ P DN E
Sbjct: 407 LFEADEKTAAYYGIPLS-EIDWIRIDDEAQYEKVLTYDVSTLEPQLSCPQGVDNVYPISE 465
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPV 422
+D VYIGSCT G ED AAA + GKKV V +VPAT V+ +
Sbjct: 466 VLGTPMDEVYIGSCTNGSLEDLKAAADIL--RGKKVANHVRVIVVPATNTVFKEAIE--- 520
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
K + F EAGC + P CG C G P
Sbjct: 521 -----KGYIKDFIEAGC-VISHPCCGLCCGMP 546
>gi|383761435|ref|YP_005440417.1| 3-isopropylmalate dehydratase large subunit [Caldilinea aerophila
DSM 14535 = NBRC 104270]
gi|381381703|dbj|BAL98519.1| 3-isopropylmalate dehydratase large subunit [Caldilinea aerophila
DSM 14535 = NBRC 104270]
Length = 445
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 199/413 (48%), Gaps = 52/413 (12%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
+ T +K +RA+ + G V DI+++HD + +FG+ +V E
Sbjct: 2 SGQTFAQKALARAAGLASVEVGQVVDARPDIVLSHD--NTAAIRRIWLQFGQQ-RVVIPE 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
+I I DH + + +N +R F EQ I+YF+++ +G+CH L+
Sbjct: 59 RIAITLDHAVPAPTTKHAQNHAEIRQFVQEQGIRYFFEVG-----------RGICHQVLS 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+E PG+++LG DSHT G G F GIG ++ + TG++ L+VP +++ VL+GE
Sbjct: 108 EEAIVLPGQLILGADSHTTHFGWLGAFGAGIGRSEVAALWATGELWLRVPESMKVVLEGE 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P + AKD L++IG++ G Y S+EF G+ +E +S+E RM L NM+ E G KN +
Sbjct: 168 LPVGVTAKDFALRLIGDLGADGGLYMSIEFHGSGIEAMSLESRMVLPNMMAEFGAKNAWI 227
Query: 307 PADGTTFKYL-----------EDKTSLPYEP--------------VYSDEKASFLSEYRF 341
D T YL E + P P ++ D A++ + + +
Sbjct: 228 APDTKTTAYLAERMKRKAADSEQRFGTPGTPLSVAELQALLASMALFPDPDATYAAVHHY 287
Query: 342 DISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK 401
+ LEP +A PHS DN ++ + ++G+CT G+ ED AAA V G++V
Sbjct: 288 RAADLEPYIACPHSVDNVVPLSAVAGTRVQQAFLGTCTNGRLEDLAAAANVI--RGRRVA 345
Query: 402 --VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
V ++PA+ +V + Q F EAG P CG C+G
Sbjct: 346 PGVRFIVIPASSEVLKAALE--------RGYIQDFVEAGA-VIGVPGCGPCMG 389
>gi|254167464|ref|ZP_04874316.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197623727|gb|EDY36290.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 409
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 40/391 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SE+ ++ PG VW+++DI+ + GP K+ F N V
Sbjct: 3 TIVEKILQEHSEE-KVEPGKIVWIDLDIITAREFGGPNVVKHLKENFSGN--------YV 53
Query: 130 IIPDHYIFTSDERANRNV-------DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
P+ FT D +I R F E IK F DI +G+
Sbjct: 54 AKPESTFFTFDLSVPAKTLKYALAQNICRKFAKEVGIKVF-DIN-----------QGIGT 101
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L G +PG +GTDSH GA G F G+G+ D F TGK +VP T++ +
Sbjct: 102 HVLIDRGVVKPGMTAVGTDSHYNILGAMGVFGQGMGDKDIAFAFKTGKTWFEVPETMKVI 161
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
++G+ +A+DL ++ E+ AGA +S+E+ G + LS++ R+TL + E GG
Sbjct: 162 VEGKYNFPTVARDLTFAVMRELGPAGALGRSIEYYGDAISSLSIDGRITLASQTTEMGGI 221
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
G P D + E K + ++ + +D++A ++ E D++ LEPL+A P +P N
Sbjct: 222 IGFTPMDEKLKSFYESK-GMNFKAIEADKEAEYVEEIHIDVNNLEPLMASPPNPCNVHPV 280
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + ++ID +IGSCT G+ ED +AAAK+ GKK+KVP + P T+++W+ +
Sbjct: 281 SEYEGMEIDGAFIGSCTNGRYEDLVAAAKIL--KGKKLKVPLTITPTTREIWLRLMK--- 335
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG +P CG C G
Sbjct: 336 -----EGIWEIFAEAGA-VLTNPGCGGCAEG 360
>gi|384217627|ref|YP_005608793.1| hypothetical protein BJ6T_39310 [Bradyrhizobium japonicum USDA 6]
gi|354956526|dbj|BAL09205.1| hypothetical protein BJ6T_39310 [Bradyrhizobium japonicum USDA 6]
Length = 420
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++EKI +R S + GD V VD + D P + FK GEN V D ++V
Sbjct: 5 TISEKILARKSGQ-DAHAGDLVVCEVDCALGTDGSVPMALDYFKAMGGEN--VRDAGRLV 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DHY+ + + ++RDF ++ + ++G +G+ H + + G
Sbjct: 62 FALDHYVPPTSPQTIELHRVIRDFAR----RFSVTLHEVG--------EGIGHQLIVETG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG +++G DSH T GA FATGIG++D V+ G++ L+VP ++R VL G++P
Sbjct: 110 RALPGGLVVGADSHAVTYGALNCFATGIGSSDLAAVMLCGRIWLRVPDSIRVVLTGQLPG 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+ L + G + GA Y+++EF G V L++E+R+ L N+ VE G K G+ PAD
Sbjct: 170 GVYAKDIALALAGMLGADGAAYQALEFAGPGVATLALEDRLVLSNLAVEMGAKTGIFPAD 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T YL+ +T +EPV +D A + + L P +A PH D +
Sbjct: 230 AETVAYLQGRTGQAFEPVAADPDAHYSRTVEIALDALTPQIALPHLVDQVVALEDAAGTP 289
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKV 413
+ VY+G+CTGG+ DF A V A G V + PA+++V
Sbjct: 290 VQMVYLGTCTGGRLRDFHQALAVLEAGGGVAPGVQLVVTPASREV 334
>gi|404493543|ref|YP_006717649.1| 3-isopropylmalate dehydratase large subunit [Pelobacter
carbinolicus DSM 2380]
gi|77545585|gb|ABA89147.1| isopropylmalate/citramalate isomerase, large subunit [Pelobacter
carbinolicus DSM 2380]
Length = 426
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 195/394 (49%), Gaps = 35/394 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ +KIF+ A + + PG V +++D ++ H++ P I E+ +V+D KI
Sbjct: 4 TIAQKIFA-AHLRDEPFPGTYV-LDLDRVLCHEITTP--VAIADLEWRGKDRVFDPSKIK 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D + ILR++ +I F+DI GVCH ++G
Sbjct: 60 AVIDHVTPAKDTKTAIQGKILREWAQRHDIPDFFDIGQ----------NGVCHALFPEKG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
RPG ++ DSHTCT GAFG FA G+G TD + G + P ++ + G +P+
Sbjct: 110 FIRPGYTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFRKPQSILVNITGTLPE 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ +KD+IL II ++ V GAT +EF G V+ +SM+ RMTL NM +EAGG G+ D
Sbjct: 170 HVYSKDVILHIIHKLGVNGATDHVLEFRGPVVDAMSMDARMTLTNMAIEAGGTCGICLPD 229
Query: 310 GTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
T YL ++ + +SD A + D+S+LEP V + PD
Sbjct: 230 QVTVDYLWPFISEEYASKEAALADFRKWHSDADAEYAKVLDIDVSQLEPQVTYDYKPDCV 289
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
AR+ +++VYIG+CT G+ ED AA + V L P T K++ +
Sbjct: 290 KTARQMAGTPVNQVYIGTCTNGRLEDLRQAADILKGHKLAPNVRGILSPGTPKIFREAME 349
Query: 420 LPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + F +AG C T +P+CGACLG
Sbjct: 350 EGILAT--------FMDAGFCIT--NPTCGACLG 373
>gi|386347858|ref|YP_006046107.1| homoaconitate hydratase family protein [Spirochaeta thermophila DSM
6578]
gi|339412825|gb|AEJ62390.1| homoaconitate hydratase family protein [Spirochaeta thermophila DSM
6578]
Length = 428
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 200/397 (50%), Gaps = 42/397 (10%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + E+P G +V +++D + H++ P + G++ +V+D KI
Sbjct: 4 TVAEKIFDAHLVEEPY--EGVHV-LSLDRVFCHEITTPIAINDLVAR-GKD-RVFDASKI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILR++ I++F D+G GVCH +
Sbjct: 59 KAVIDHVTPAKDSKTAIQGKILREWSRRHGIEFF----DIGR-------NGVCHALFPER 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G K P T++ + G +
Sbjct: 108 GFVRPGFTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFKRPRTIKVEIIGTLK 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL II + V GAT + +EF G VE SME RMTLCNM VEAG +G+
Sbjct: 168 PGVFAKDVILSIIHRLGVNGATDRVIEFSGPVVEHFSMESRMTLCNMAVEAGATSGICYP 227
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T +YL ++ +E DE A + D+S LEPLV + PD
Sbjct: 228 DMVTVEYLWPFIEDEYPNKEAALEDFERWRPDEDAKYEEVIVHDVSDLEPLVTYGYKPDL 287
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
RE + ++D+VYIGSCT G+ ED AA++ GKK+ V + PA+ +
Sbjct: 288 VKPVREMEGTRVDQVYIGSCTNGRIEDLRIAAQIL--EGKKIADHVRGIVSPASPGAYAQ 345
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + +IF EAG C T +P+CGACLG
Sbjct: 346 AFK--------EGLLEIFMEAGFCVT--NPTCGACLG 372
>gi|159899819|ref|YP_001546066.1| 3-isopropylmalate dehydratase large subunit [Herpetosiphon
aurantiacus DSM 785]
gi|226735972|sp|A9B805.1|LEUC_HERA2 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|159892858|gb|ABX05938.1| 3-isopropylmalate dehydratase [Herpetosiphon aurantiacus DSM 785]
Length = 421
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 193/416 (46%), Gaps = 44/416 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T E+I AS + + GD V VNVD++M HD P E G +VWDR+K+
Sbjct: 4 TFAEQILGHASGRSDVQAGDMVVVNVDLVMMHDSLSPSIIETLHNELGAE-RVWDRDKVA 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + R +R + +Q I + +D+ +G+ H L +EG
Sbjct: 63 VVIDHVAPAATVRQAEQQQQVRRWVAQQGISHLFDVG-----------RGISHPVLIEEG 111
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG +++G+DSH+ GA F +G+G TD L TG+ +VP T+R G
Sbjct: 112 LVQPGMLVVGSDSHSTGYGAAAAFGSGMGTTDIALALATGQTWFRVPETVRVNAVGNFQP 171
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KD L + GATY+S+E+ G V+ LS ERMTL + +E G K G+V
Sbjct: 172 GVSVKDFGLWAARTLRADGATYQSVEWHG--VDFLSWRERMTLATLSIEVGAKAGIVAPT 229
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
G L + +P E + + AS+ D+S LEP V+ PH DN + V
Sbjct: 230 G-----LGAEHPVP-EWLRVEADASYSRVVECDLSTLEPQVSVPHYVDNVVDLADVGRVA 283
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D VY+G+CT G ED AAA + V +VPA+ + +L S G
Sbjct: 284 VDVVYLGTCTNGHYEDMAAAASILKGRRLAPNVRMIVVPASSE------SLHRAASDGTL 337
Query: 430 CSQIFEEAGCDTPASPSCGACLG---------------GPKDTYARMNEPMASLCL 470
+ + A T +P CGAC+G G ++ RM P A++ L
Sbjct: 338 ATLL---AAGATIGTPGCGACIGRHMGVLAPDEVCVFTGNRNFRGRMGSPGANIYL 390
>gi|254166897|ref|ZP_04873751.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|289596372|ref|YP_003483068.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|197624507|gb|EDY37068.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
gi|289534159|gb|ADD08506.1| homoaconitate hydratase family protein [Aciduliprofundum boonei
T469]
Length = 409
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 194/391 (49%), Gaps = 40/391 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI SE+ ++ PG VW+++DI+ + GP K+ F N V
Sbjct: 3 TIVEKILQEHSEE-KVEPGKIVWIDLDIITAREFGGPNVVKHLKENFSGN--------YV 53
Query: 130 IIPDHYIFTSDERANRNV-------DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
P+ FT D +I R F E IK F DI +G+
Sbjct: 54 AKPESTFFTFDLSVPAKTLKYALAQNICRKFAKEVGIKVF-DIN-----------QGIGT 101
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L G +PG +GTDSH GA G F G+G+ D F TGK +VP T++ +
Sbjct: 102 HVLIDRGVVKPGMTAVGTDSHYNILGAMGVFGQGMGDKDIAFAFKTGKTWFEVPETMKVI 161
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
++G+ +A+DL ++ E+ AGA +++E+ G + LS++ R+TL + E GG
Sbjct: 162 VEGKYNFPTVARDLTFAVMRELGPAGALGRAIEYYGDAISSLSIDGRITLASQTTEMGGI 221
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
G P D + E K + ++ + +D++A ++ E D++ LEPL+A P +P N
Sbjct: 222 IGFTPMDEKLKSFYESK-GMNFKVIKADKEAEYVEEIHIDVNNLEPLMASPPNPCNVHPV 280
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + ++ID +IGSCT G+ ED +AAAK+ GKK+KVP + P T+++W+ +
Sbjct: 281 SEYEGMEIDGAFIGSCTNGRYEDLVAAAKIL--KGKKLKVPLTITPTTREIWLRLMK--- 335
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG +P CG C G
Sbjct: 336 -----EGIWEIFAEAGA-VLTNPGCGGCAEG 360
>gi|432331948|ref|YP_007250091.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanoregula formicicum
SMSP]
gi|432138657|gb|AGB03584.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Methanoregula formicicum
SMSP]
Length = 403
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 172/331 (51%), Gaps = 30/331 (9%)
Query: 124 DREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
D + I DH ++ A LR+F F + ++G G+CH
Sbjct: 48 DDTEFSIFFDHIAPANNSTAATLQHELREFAKSS----FMNFSEVGG--------GICH- 94
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
L EG+ PGE+++G DSH+ T GAFG FATG+G TD + TG+ L+VP T+ L
Sbjct: 95 QLMGEGNVLPGEIVIGADSHSVTLGAFGAFATGVGATDMAAIWLTGETWLRVPETIGIRL 154
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
+G AKDL L +GE+ GATY+++EF+G V+ LS++ERM L N+ +EAG K
Sbjct: 155 EGRFAGAAEAKDLALAYVGELGTDGATYQALEFIGDAVKDLSIDERMVLSNLSIEAGAKA 214
Query: 304 GVVPADGTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
G+ AD T +YL ++ T P P E ++ E FD+S + PLVA PH D
Sbjct: 215 GLFYADDVTARYLRERGHTVKPQIP----ESCTYTREQEFDLSDIIPLVAVPHRVDTVKP 270
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
E + +D+V+IG+CT G+ D A++ GKKV V T +VPA+ V +
Sbjct: 271 VDELAGLPLDQVFIGTCTNGRYSDLARLARIV--KGKKVAVRTIVVPASASVLLQATRTG 328
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
V EAGC T +P CG CLG
Sbjct: 329 VLAD--------IVEAGC-TVGTPGCGPCLG 350
>gi|124485060|ref|YP_001029676.1| hypothetical protein Mlab_0233 [Methanocorpusculum labreanum Z]
gi|124362601|gb|ABN06409.1| 3-isopropylmalate dehydratase [Methanocorpusculum labreanum Z]
Length = 417
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 195/393 (49%), Gaps = 40/393 (10%)
Query: 65 VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
+K A TL+E+I A G V VD HD G + F+ +N V +
Sbjct: 1 MKMADTLSERILGSAE-------GTYVDRMVDRAFAHDGTGAQALVAFENFRIQNKSVVN 53
Query: 125 REKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIA 184
EK+ II DH ++ LR F QN +F+++ G+CH
Sbjct: 54 PEKLSIIYDHISPANNSVTADLQGDLRKFS-RQNGMHFHEVG-----------CGICH-Q 100
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
+ EG C PGE+++G DSH+CT GA G F+TG+G TD + TG +VP ++ VL
Sbjct: 101 IMSEGVCLPGEIVVGADSHSCTLGALGAFSTGVGATDMAGIWATGGTWFRVPESISIVLS 160
Query: 245 GEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNG 304
G++ + KD+ L + + + G TYK++EF+G + +E R+TL NM VE G K G
Sbjct: 161 GKLSGHTEPKDVALSYVKALGMDGGTYKALEFIGDGAAGMPVEGRLTLSNMAVETGAKTG 220
Query: 305 VVPADGTTFKYL-----EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNR 359
+ AD T ++L ++KT +P E S+ SE D+ +EPL+A PH DN
Sbjct: 221 LFYADALTREHLITYGADEKTISLQKP----EDCSYESEIYLDLDDIEPLLAIPHRVDNA 276
Query: 360 ALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
E +ID+V++G+CT G+ ED A++ GKKV V T + PA++ + +
Sbjct: 277 VPVTEYSGTQIDQVFMGTCTNGRFEDLKRFAEIV--RGKKVAVRTIVTPASKDAYAKALS 334
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
V S I EAGC P CG CLG
Sbjct: 335 TGV-------LSDIL-EAGC-VICPPGCGPCLG 358
>gi|307594824|ref|YP_003901141.1| 3-isopropylmalate dehydratase [Vulcanisaeta distributa DSM 14429]
gi|307550025|gb|ADN50090.1| 3-isopropylmalate dehydratase [Vulcanisaeta distributa DSM 14429]
Length = 416
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 191/386 (49%), Gaps = 26/386 (6%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
+TLTEKI SRAS K +SPGD V +NVD+ HD+ G + +K KVWD +
Sbjct: 2 GLTLTEKILSRASGK-YVSPGDVVEINVDLAAFHDLTGYHVVEVMEKM--GVVKVWDVNR 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
V+ DH ERA LR F IK+F+D+ D G+ H L
Sbjct: 59 FVLAFDHLAPPPTERAAEIQVGLRKFAKAAGIKFFHDVGD-----------GILH-QLLL 106
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+ + PG+V++ DSHT T GA G FA G+G +D ++ TGK L VP R + G
Sbjct: 107 DHYALPGQVVMAADSHTTTVGAVGAFAQGLGASDIAAIVITGKTWLVVPEPFRIRILGRP 166
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ KD+ L ++ G KS EF M+ R T+ NM +E G +
Sbjct: 167 GPGVYGKDVALHLLSVFRAEGLNGKSAEFFVEDPGAFPMDYRATVSNMGIELGLDAAMFI 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T ++++++ + +PV D A ++ Y ++++LEPLVA PHS DN E +
Sbjct: 227 PDSETVRHIKERRGVEVKPVTPDPDARYVDGYDVELNRLEPLVATPHSVDNVKSISEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
+ +D V+IGSCT G+ D AAK+ L +G KV+ +PA++++++ L
Sbjct: 287 LDVDYVFIGSCTNGRLSDIEVAAKI-LRNG-KVRSRCVAIPASREIYIRAMEL------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
AGC +CG CLGG
Sbjct: 338 -GYIDTLVRAGCVVTYG-TCGPCLGG 361
>gi|307354620|ref|YP_003895671.1| 3-isopropylmalate dehydratase [Methanoplanus petrolearius DSM
11571]
gi|307157853|gb|ADN37233.1| 3-isopropylmalate dehydratase [Methanoplanus petrolearius DSM
11571]
Length = 403
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 173/334 (51%), Gaps = 30/334 (8%)
Query: 121 KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
KV EKI II DH + ++ LRDF E +D +D+G +G+
Sbjct: 44 KVRSPEKISIIYDHIVPANNSETANLQHELRDFSKEAG----FDFRDIG--------EGI 91
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
CH ++ EG C PGEV++G DSHTCT GAFG FATG+G TD + TG+ +VP T
Sbjct: 92 CHQVMS-EGVCLPGEVVVGADSHTCTLGAFGAFATGVGATDMAAIWATGETWFRVPQTTG 150
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
+L+G + + KD+ L + + + GATY+++EF G +ME R+T+CNM +EAG
Sbjct: 151 VILEGRLKGHAEPKDVALTYVTRLGMDGATYRAIEFTGEGAATTAMEGRLTICNMAIEAG 210
Query: 301 GKNGVVPADGTTFKYLED--KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
K G+ +D T YL + K + EP E ++ E D+ + P ++ PH DN
Sbjct: 211 AKAGLFYSDEKTVSYLAEFGKDADRQEP----EDCTYADELYLDLDDIVPSISAPHRVDN 266
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVY 418
+ + +D+V++G+CT G+ ED A + GKKV V T +VPA++
Sbjct: 267 AVPVDKYEGTPLDQVFVGTCTNGRYEDLKRFADIV--RGKKVAVRTIVVPASKTALQKCI 324
Query: 419 TLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
V S I AGC +P CG CLG
Sbjct: 325 ETGV-------LSDIV-AAGCSI-GTPGCGPCLG 349
>gi|395644991|ref|ZP_10432851.1| 3-isopropylmalate dehydratase large subunit [Methanofollis
liminatans DSM 4140]
gi|395441731|gb|EJG06488.1| 3-isopropylmalate dehydratase large subunit [Methanofollis
liminatans DSM 4140]
Length = 404
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 167/326 (51%), Gaps = 29/326 (8%)
Query: 132 PDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHC 191
PD D N D ++Q ++ F + + F+ GVCH +A EG
Sbjct: 49 PDRRYLIFDHIVPANTSTTAD--LQQEMREFAAMTGMHFFEVG---AGVCHQVMA-EGRA 102
Query: 192 RPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYL 251
PGEV++G DSH+CT GAFG FATG+G TD + TG +VP T L+G +
Sbjct: 103 LPGEVIVGADSHSCTLGAFGAFATGVGATDMAGIWATGGTWFRVPETTGIFLEGTLSGAA 162
Query: 252 LAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGT 311
AKD+ L +G + + GATY+++EFVG LSM +R+TLCNM VE G K G+ AD T
Sbjct: 163 SAKDVALAYVGALGMDGATYRALEFVGDGAASLSMADRLTLCNMAVETGAKAGIFYADRT 222
Query: 312 TFKYLED-----KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
T YL + +P+ Y DE A D+ + PL+A P D E +
Sbjct: 223 TRDYLAGFGIAAEPQVPHAGGYPDEIA-------IDLEDVVPLLALPPRVDTVCPVAEKE 275
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
+ +D+V++G+CTGG+ ED A A L GK+V V T +VPA++ V M + V
Sbjct: 276 GLPVDQVFLGTCTGGRYEDLAAFAA--LVRGKQVAVRTVVVPASRAVLMQAVSTGVLAD- 332
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
AGC A+P CG CLG
Sbjct: 333 -------LVAAGCAV-ATPGCGPCLG 350
>gi|219850443|ref|YP_002464876.1| 3-isopropylmalate dehydratase large subunit [Chloroflexus aggregans
DSM 9485]
gi|219544702|gb|ACL26440.1| 3-isopropylmalate dehydratase [Chloroflexus aggregans DSM 9485]
Length = 417
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 199/418 (47%), Gaps = 51/418 (12%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++E+I SR + + + GD V NVD++M HD PG I E G +VWD ++I
Sbjct: 3 TMSEQILSRVAGR-MVRAGDVVTANVDLVMVHDSLAPGIIRILHNELGAE-RVWDPQRIA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + + +R + Q I +D+ +G+ H L +EG
Sbjct: 61 VVIDHVAPAASVQTAEKQQEVRRWVKAQGIPNLFDVG-----------RGISHPVLVEEG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG ++LG+DSH+ G G F TG+G+TD L TGK L+VP T GE
Sbjct: 110 LAQPGMLILGSDSHSTAYGCVGAFGTGMGSTDIALALATGKTWLRVPETTVVRARGEFGF 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL L+ + GATY ++E+ G VE LS+ ERMTL + +E G K G++P
Sbjct: 170 GVGPKDLALRAARLLRADGATYAAIEWHG--VEHLSVMERMTLATLSIEMGAKAGIIPPT 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
G D T P P D A + D+ +LEP V+ PH DN A + V
Sbjct: 228 GL------DLTG-PLVPTV-DADAQYQQVVEIDLEQLEPQVSAPHYVDNVANLSDLGRVA 279
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGG 427
+D VY+G+CT G ED AA++ +G+++ V +VPA+ + L + G
Sbjct: 280 VDVVYLGTCTNGHYEDMAVAAQIL--AGRRIAPGVRMIVVPASAQ------ALHRAAADG 331
Query: 428 KTCSQIFEEAGCDTPASPSCGACLG---------------GPKDTYARMNEPMASLCL 470
+ + A T +P CGAC+G G ++ RM P A + L
Sbjct: 332 TLATLL---AAGATIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYL 386
>gi|307719762|ref|YP_003875294.1| 3-isopropylmalate dehydratase large subunit [Spirochaeta
thermophila DSM 6192]
gi|306533487|gb|ADN03021.1| 3-isopropylmalate dehydratase, large subunit [Spirochaeta
thermophila DSM 6192]
Length = 428
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 199/397 (50%), Gaps = 42/397 (10%)
Query: 70 TLTEKIF-SRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
T+ EKIF + E+P G +V +++D + H++ P + G++ +V+D +I
Sbjct: 4 TVAEKIFDAHLVEEPY--EGVHV-LSLDRVFCHEITTPIAINDLVAR-GKD-RVFDPARI 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
+ DH D + ILR++ I++F D+G GVCH +
Sbjct: 59 KAVIDHVTPAKDSKTAIQGKILREWSRRHGIEFF----DIGR-------NGVCHALFPER 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G RPG ++ DSHTCT GAFG FA G+G TD + G K P T++ + G +
Sbjct: 108 GFVRPGFTVIMGDSHTCTHGAFGAFAAGVGTTDLEVGILKGVCAFKRPRTIKVEITGRLK 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL II + V GAT + +EF G VE SME RMTLCNM VEAG +G+
Sbjct: 168 PGVFAKDVILSIIHRLGVNGATDRIIEFAGPVVEDFSMESRMTLCNMAVEAGATSGICYP 227
Query: 309 DGTTFKYL----------EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN 358
D T +YL ++ + DE A + D+S LEPLV + PD
Sbjct: 228 DMVTVEYLWPFIEDEYPNKEAALEDFGRWRPDEDAEYEEVIVHDVSDLEPLVTYGYKPDL 287
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMD 416
RE + ++D+VYIGSCT G+ ED AA++ GKK+ V + PA+ +
Sbjct: 288 VKPVREMEGTRVDQVYIGSCTNGRIEDLRIAAQIL--KGKKIADHVRGIVSPASPGAYAQ 345
Query: 417 VYTLPVPGSGGKTCSQIFEEAG-CDTPASPSCGACLG 452
+ + +IF EAG C T +P+CGACLG
Sbjct: 346 AFK--------EGLLEIFMEAGFCVT--NPTCGACLG 372
>gi|327400418|ref|YP_004341257.1| 3-isopropylmalate dehydratase large subunit [Archaeoglobus
veneficus SNP6]
gi|327315926|gb|AEA46542.1| 3-isopropylmalate dehydratase large subunit [Archaeoglobus
veneficus SNP6]
Length = 415
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 191/386 (49%), Gaps = 32/386 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKIFS S + GD V +D + D P + E G + DR
Sbjct: 4 TIAEKIFSEKSGSDAYA-GDIVVARIDQIALQDGTAPLAIRSIM-EMGLEVRAADRTHFF 61
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH + + + + +R+F + + NP +G+ H L E
Sbjct: 62 V--DHAAPSPRKELSNDQKFIREFAEKVGADF------------NPPGEGIIH-QLMVER 106
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG++ +G DSHTCT GA G FATG+G+TD + GK +VP T R ++G MP
Sbjct: 107 FIKPGDLAVGADSHTCTYGALGAFATGMGSTDIAVAVVLGKNWFRVPETFRIEINGRMPK 166
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDLIL +IG++ GATYK++EF G T++ + M+ R+T+ NM +E G K G+ +D
Sbjct: 167 GVYPKDLILTVIGKLGADGATYKALEFHGETIDGMYMDGRLTMANMAIECGAKAGLFKSD 226
Query: 310 GTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T YL E + + DE A + E D + +EP+VAKPH+ DN A E + V
Sbjct: 227 DITKAYLAEMGRENSFREIKPDEDAEYEKEIHMD-ADIEPVVAKPHNVDNIASISEVEGV 285
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
+D+V++G+CT G+ D A++ G+KVK + + PA++ +++
Sbjct: 286 NVDQVFVGTCTNGRLSDIEIVARML--KGRKVKKGLRLIVAPASRSIYLKALE------- 336
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
I E G P P C C+G
Sbjct: 337 KGYLKTIVEAGGLIAP--PGCACCVG 360
>gi|163845925|ref|YP_001633969.1| 3-isopropylmalate dehydratase large subunit [Chloroflexus
aurantiacus J-10-fl]
gi|222523648|ref|YP_002568118.1| 3-isopropylmalate dehydratase large subunit [Chloroflexus sp.
Y-400-fl]
gi|163667214|gb|ABY33580.1| 3-isopropylmalate dehydratase [Chloroflexus aurantiacus J-10-fl]
gi|222447527|gb|ACM51793.1| 3-isopropylmalate dehydratase [Chloroflexus sp. Y-400-fl]
Length = 418
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 196/416 (47%), Gaps = 47/416 (11%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T++E+I SR + + + GD V NVD++M HD PG I +E G +VWD +++
Sbjct: 3 TMSEQILSRVAGR-TVRAGDVVTANVDLVMVHDSLAPGIIRILHQELGAE-RVWDPQRVA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + + +R + Q I + +D+ +G+ H L +EG
Sbjct: 61 VVIDHVAPAASVQTAEKQQEVRRWVRAQGIPHLFDVG-----------RGISHPVLVEEG 109
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG ++LG+DSH+ G G F TG+G+TD L TGK L+VP T+ G
Sbjct: 110 LAQPGMLILGSDSHSTAYGCVGAFGTGMGSTDIALALATGKTWLRVPETIVVRARGRFGF 169
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ KDL L+ + GATY ++E+ G VE LS+ ERMTL + +E G K G+VP
Sbjct: 170 GVGPKDLALRAARLLRADGATYAAIEWHG--VEFLSVMERMTLATLSIEMGAKAGIVPPT 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
G + P P + + A + D+ +LEP V+ PH DN A + V
Sbjct: 228 GL-------NVTGPLLPTVTAD-AGYQEVVEIDLDQLEPQVSAPHYVDNVANLSDLGRVA 279
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D VY+G+CT G ED AA++ V +VPA+ + L + G
Sbjct: 280 VDVVYLGTCTNGHYEDMAVAAQILAGRRLAPGVRMIVVPASAQ------ALQRAAADGTL 333
Query: 430 CSQIFEEAGCDTPASPSCGACLG---------------GPKDTYARMNEPMASLCL 470
+ + A T +P CGAC+G G ++ RM P A + L
Sbjct: 334 ATLL---AAGATIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYL 386
>gi|375306926|ref|ZP_09772218.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Paenibacillus sp. Aloe-11]
gi|375081012|gb|EHS59228.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Paenibacillus sp. Aloe-11]
Length = 419
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 200/394 (50%), Gaps = 41/394 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN---AKVWDRE 126
TL EK+ + + + PGD V D M HD+ + F K ++ K E
Sbjct: 4 TLAEKLLIHNTGEKNIKPGDIVIAYPDRYMIHDI-----YTSFLKRALKDMGVTKALHPE 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRD---FCMEQNIKYFYDIKDLGNFKANPDYKGVCHI 183
K VI+ DH + T+ +A + + RD C + NI+ + +G+ H
Sbjct: 59 KAVIVLDHLMPTN--QAATDPEHFRDGLELCEKLNIQNLHK------------GEGISHS 104
Query: 184 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVL 243
+ + + +PG+V++ TDSHT T G F TGIG+T+ L TG++ LKVP ++ V+
Sbjct: 105 LMHELRYAKPGDVVVATDSHTTTYGGAACFCTGIGHTEMAAALATGEIWLKVPSAIKIVI 164
Query: 244 DGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKN 303
DGE + + AKD+IL+I+G+I G YKS+EF G+ V+ +SM +R T+ NM +EAG K
Sbjct: 165 DGEFKNGVSAKDIILKILGDIKSDGGQYKSLEFTGSAVKSMSMNQRFTIANMSLEAGAKC 224
Query: 304 GVVPADGTTFKYL-EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
G+ D T Y D + + + + DE A + +++S+LEP ++ P DN
Sbjct: 225 GLFEVDEKTADYYGMDYSEISW--LTMDEDAQYEKVLHYNVSELEPQLSCPQGVDNVHGI 282
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTL 420
+ K++ VYIGSCT G ED AA++ GKK+ + ++PAT V+ + L
Sbjct: 283 SAVEGTKLNEVYIGSCTNGSIEDMAVAAEIL--KGKKIAKYLKLVIIPATNNVFKESMRL 340
Query: 421 PVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
+ F +AG + P CG C G P
Sbjct: 341 GYI--------KTFIDAG-GMVSHPCCGLCCGQP 365
>gi|374631901|ref|ZP_09704275.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Metallosphaera
yellowstonensis MK1]
gi|373525731|gb|EHP70511.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Metallosphaera
yellowstonensis MK1]
Length = 415
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 189/384 (49%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS + +SPGD + NVDI+ HD+ G + +K K++D+ KIV
Sbjct: 4 TLTEKILSRASGR-SVSPGDVIEANVDIVAFHDLTGYHVIEVMEK--ANMMKIFDKSKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D R+ +R F E + F+D+ G+ H L E
Sbjct: 61 VAFDHLAPPPDVRSAEIQVNIRKFVREMRLPNFHDVN-----------VGILH-ELLIEK 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT T+GA G FA G+G +D + TGK + VP + L G
Sbjct: 109 YALPGQVIVAADSHTTTSGALGAFAQGMGASDVAAAVITGKTWMVVPQPFKVELTGTPGK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+++G+ S+E + + R T+ NM +E + D
Sbjct: 169 WVNGKDVALKLLGDFKADYFNGMSIEVHVRNPKAFPTDYRATVSNMGIEMNADALMFVPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y++ E + D KAS+ EY ++ KLEPLVA P+S DN ARE +V+
Sbjct: 229 QETKDYIKTMRGKEVELLTPDPKASYQDEYTIELEKLEPLVAAPYSVDNVKTAREVSNVE 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+VYIGSCT G+ DF AA++ G+ VK +P++ +++ K
Sbjct: 289 VDQVYIGSCTNGRLSDFQMAAEIL--KGRTVKTRCIAIPSSYEMFKQAME--------KG 338
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ AGC +CG CLGG
Sbjct: 339 YIETLVNAGCVVTYG-TCGPCLGG 361
>gi|309792066|ref|ZP_07686540.1| hypothetical protein OSCT_2491 [Oscillochloris trichoides DG-6]
gi|308225873|gb|EFO79627.1| hypothetical protein OSCT_2491 [Oscillochloris trichoides DG6]
Length = 409
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 203/420 (48%), Gaps = 51/420 (12%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL+E+I S+A+ KP + G+ V VD++M HD P I ++E G +VWD E+
Sbjct: 2 AQTLSEQILSQAAGKP-VRAGEVATVAVDLVMMHDSLSPSIIKIMEQELGAE-RVWDPER 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ ++ DH + + + +R + Q I +FYD+ +G+ H L +
Sbjct: 60 VAVVVDHVAPAATVQTAEKQNEVRRWVQRQGITHFYDVG-----------RGISHPVLVE 108
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG +PG V++G+DSH+ G G F +G+G+TD TG+ +VP T+ G
Sbjct: 109 EGVAQPGMVIVGSDSHSTAYGCVGAFGSGMGSTDIALAAATGRTWFRVPETVLVRATGRF 168
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKDL L+ E+ GATY ++E+ G VE L++ ERMTL +E G K G+VP
Sbjct: 169 RPGVNAKDLALRAARELRADGATYAAVEWHG--VEFLTVMERMTLATFSIEVGAKAGLVP 226
Query: 308 ADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
G + E + +E A + D++ L+P V+ P DN + +
Sbjct: 227 PVGI--------PQVAPEWLRVEEGAIYSRVVEVDLNTLQPQVSAPSFVDNVSDLGDLGR 278
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
V +D VY+G+CT G ED AAA++ +GK+V V +VPA++ + +
Sbjct: 279 VAVDVVYLGTCTNGHYEDMAAAARIL--AGKQVAPGVRLMVVPASRDAMLRATEDGTLAT 336
Query: 426 GGKTCSQIFEEAGCDTPASPSCGACLG------GPKDT---------YARMNEPMASLCL 470
+ I +P CGAC+G GP +T RM P A++ L
Sbjct: 337 LLAAGAAI---------GTPGCGACIGRHMGVLGPGETCLFTGNRNFRGRMGSPEANIYL 387
>gi|406878411|gb|EKD27324.1| hypothetical protein ACD_79C00761G0009 [uncultured bacterium]
Length = 309
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 155/265 (58%), Gaps = 25/265 (9%)
Query: 201 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQI 260
DSHTCT GAFG FA G+G TD + G + P T++FV++G++P + +KD+IL I
Sbjct: 3 DSHTCTHGAFGAFAAGVGTTDLEVGMLKGVCAFQFPKTIKFVINGKLPKGVYSKDVILYI 62
Query: 261 IGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYL---- 316
I +I V GAT MEF G V+ +SME RMTLCNM +EAGG G+ D T +YL
Sbjct: 63 ISQIGVNGATNMVMEFTGDVVDDMSMESRMTLCNMAIEAGGTCGICYPDKKTVEYLWEFI 122
Query: 317 -----EDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKI 370
+ K +L Y+ + SD+ A + +D+SKLEP+V PDN RE + K+
Sbjct: 123 KGEYKDKKDALKEYKRLISDKDAVYEKVIEYDVSKLEPMVTFGFKPDNVKAVREMEGTKV 182
Query: 371 DRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGK 428
D+VYIGSCT G+ ED AAK+ GKK+ V L PAT D+Y + + +
Sbjct: 183 DQVYIGSCTNGRIEDLRIAAKIL--KGKKINNSVRGILSPATP----DIYAMALE----E 232
Query: 429 TCSQIFEEAG-CDTPASPSCGACLG 452
+IF ++G C T +P+CGACLG
Sbjct: 233 GLIKIFLDSGFCVT--NPTCGACLG 255
>gi|242238897|ref|YP_002987078.1| aconitate hydratase domain-containing protein [Dickeya dadantii
Ech703]
gi|242130954|gb|ACS85256.1| aconitate hydratase domain protein [Dickeya dadantii Ech703]
Length = 646
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 198/393 (50%), Gaps = 17/393 (4%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MTL EKI +R S G+ + + D H+ + K+ FG+N +W E +
Sbjct: 199 MTLCEKIIARHLLTGIHSSGNALHLRPDWRFIHEYYTAMCGHMLKRTFGDNLTLWQPESV 258
Query: 129 VIIPDHYIFTSDERANRNVDILRDF-CMEQNIKYFYDIKDLGNFKANPD---YKGVCHIA 184
V DH + + + + D + + F L + N D +G+ H A
Sbjct: 259 VTFEDHLPYMHQSKVHVEQKLTGDLEHLLDAHRAFTQQWRLTAHRYNLDGDGAEGISH-A 317
Query: 185 LAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLD 244
L E + PG++++GTDSHT GA G A G+G+TD + TG L P ++R V
Sbjct: 318 LMAERYALPGQIIIGTDSHTPHCGALGCLAIGVGSTDMAASMVTGVFRLMSPDSVRVVFT 377
Query: 245 GEMPDYLLAKDLILQIIGE--ISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
G +P+ AKD+ILQ++ I K EF G T+ERLS+++R+TL NMV E GG
Sbjct: 378 GRLPEGTGAKDMILQLLSTEWIRQGNGIGKVFEFCGDTIERLSIDDRITLTNMVAELGGV 437
Query: 303 NGVVPADGTTFKYLEDKTSLPY--EP-VYSDEKASFLSEYRFDISKLEPLVAKPHSPDN- 358
+G++ D T +L+++ + + EP ++SDE AS+ + D +L P+VA P P N
Sbjct: 438 SGLIAPDSNTVNFLKERRGIHFTLEPWMHSDEGASYAAVIEIDCRELSPMVASPGDPGNG 497
Query: 359 RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF-LASGKKVKVPTFLVPATQKVWMDV 417
AL++ + VKID Y GSCT GK +DF KV A K K+P+ ++ Q MDV
Sbjct: 498 LALSQLTEPVKIDIAYGGSCTAGKRDDFDEYHKVLHWAVQKGKKIPSDVMLYLQFGTMDV 557
Query: 418 YTLPVPGSGGKTCSQIFEEAGCDTPASPSCGAC 450
Y + + F+ AG P+CGAC
Sbjct: 558 YEY----CHERGYLETFKNAGA-ILLKPACGAC 585
>gi|305664117|ref|YP_003860405.1| 3-isopropylmalate dehydratase [Ignisphaera aggregans DSM 17230]
gi|304378686|gb|ADM28525.1| 3-isopropylmalate dehydratase [Ignisphaera aggregans DSM 17230]
Length = 414
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 203/424 (47%), Gaps = 56/424 (13%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
+TLTEKI SRAS + ++SPGD + NVD++ HD+ G + +K K+ + +
Sbjct: 3 LTLTEKILSRASGR-KVSPGDVIEANVDLVAFHDLTGYHVIEVIEKV---GMKIHRVDNL 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
VI DH + D R+ +R+F I F+D G + G+ H L E
Sbjct: 59 VIAFDHLVPPPDVRSAEIQKSIREFVKLHKISNFHD----GGY-------GILHQVLI-E 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ PG+ ++ DSHT T+GA G FA G+G +D + TGK L VP + VLDG +
Sbjct: 107 KYVLPGQFVIAADSHTTTSGALGAFAQGMGASDIAAAVLTGKTWLVVPQPFKIVLDGRLR 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVE-------RLSMEERMTLCNMVVEAGG 301
+++ KD+ L+I+ +K+ F G ++E M+ R T+ NM +E
Sbjct: 167 EWVTGKDVALEIL-------RVFKADYFNGMSIEVFVKNGTDFPMDYRATVANMGIEMNA 219
Query: 302 KNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRAL 361
+ D T +++E + + D A ++ EY ++ K+E LVA PHS DN
Sbjct: 220 DTLMFVPDEETKRFIESERGYTPNIIQPDNDAEYVDEYTVELDKVELLVAAPHSVDNVKS 279
Query: 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLP 421
E + + +D V+IGSCT G+ D AAK+ GKKVK ++PA+ K+++ L
Sbjct: 280 VSEVEGIDVDYVFIGSCTNGRLSDLEIAAKIM--KGKKVKTRCIVIPASWKIFVKAMEL- 336
Query: 422 VPGSGGKTCSQIFEEAGCDTPASPSCGACLGG------PKDT---------YARMNEPMA 466
Q EAGC +CG C+GG P +T RM P A
Sbjct: 337 -------GYIQTLVEAGCIVTYG-TCGPCIGGHFGVTAPGETVVATINRNFIGRMGSPQA 388
Query: 467 SLCL 470
+ L
Sbjct: 389 KIYL 392
>gi|332798409|ref|YP_004459908.1| 3-isopropylmalate dehydratase [Tepidanaerobacter acetatoxydans Re1]
gi|438001355|ref|YP_007271098.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696144|gb|AEE90601.1| 3-isopropylmalate dehydratase [Tepidanaerobacter acetatoxydans Re1]
gi|432178149|emb|CCP25122.1| 3-isopropylmalate dehydratase large subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 405
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 199/390 (51%), Gaps = 55/390 (14%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M + E+I ++ + K + GD + V VD+ + HDV GP + F+K E KV+D++K+
Sbjct: 1 MNIIERIIAQKTGKETVKAGDELCVPVDLAIAHDVTGPMAIEQFRKIGAE--KVFDKDKV 58
Query: 129 VIIPDHYIFTS--DERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
V + DH I +S D R N ++K FY KD+G K GV H A
Sbjct: 59 VFVIDHNIPSSSVDSRLQHN-----------SLKSFY--KDMG-IKLYHQGDGVIHQLAA 104
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++ + G++++G DSHTCTAGAFG A +G T+ V+ G + ++VP T ++G
Sbjct: 105 EKALYKEGDIVVGADSHTCTAGAFGAVAIPVGATELAAVMALGTIDIEVPQTYLIEVEGH 164
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ + AKD+IL +IG+ G T K++ F G T+ +S +E+MT+ NM +E G G V
Sbjct: 165 LNPGVYAKDVILYLIGKFGTHGFTDKAVIFGGNTITNMSFDEKMTISNMAIEMGAMIGYV 224
Query: 307 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
EP+ E + YR S ++P VA P+SP N ++ +
Sbjct: 225 NQG---------------EPIGEVE-----ATYRIQASDIQPQVACPYSPGNVKPVKDVE 264
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKV--WMDVYTLPV 422
I +V IGSCT G+ +D AA+V GKK+ V +VPA++KV MD
Sbjct: 265 GTPITQVVIGSCTNGRVQDMEIAAEVL--KGKKISDMVTMIVVPASKKVIEQMD------ 316
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
K ++IF +AG +P CG C G
Sbjct: 317 ----HKGITKIFRDAGA-IVVNPGCGPCFG 341
>gi|330835167|ref|YP_004409895.1| 3-isopropylmalate dehydratase large subunit [Metallosphaera cuprina
Ar-4]
gi|329567306|gb|AEB95411.1| 3-isopropylmalate dehydratase large subunit [Metallosphaera cuprina
Ar-4]
Length = 415
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 190/384 (49%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS K +SPGD + DI+ HD+ G + +K K++D+ K+V
Sbjct: 4 TLTEKILSRASGK-AVSPGDVIEAKTDIVAFHDLTGYHVIEVMEK--ANMVKIFDKAKVV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D R+ +R F E + F+DI G+ H L E
Sbjct: 61 VAFDHLSPPPDVRSAEIQGNIRKFVRENKLPNFHDIN-----------VGILH-ELLIEN 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT T+GA G FA G+G +D + TGK L VP + L G +
Sbjct: 109 YALPGQVIVAADSHTTTSGAVGAFAQGMGASDVAAAVITGKTWLVVPKPFKVNLKGTPGE 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+++G+ S+E + M+ R T+ NM +E + D
Sbjct: 169 WINGKDVALELLGKFKADYFNGMSIEVFVEDPKAFPMDYRATVSNMGIEMNADTLMFVPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +++ + E + D+ A++ EY +++++EPLVA P+S DN ARE V
Sbjct: 229 AETRNFIKGMRGVEVELITPDKGANYEDEYTIELNRMEPLVAAPYSVDNVRTAREESKVP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+VYIGSCT G+ DF A+K+ GKKVK +P++ +++ +
Sbjct: 289 VDQVYIGSCTNGRISDFAIASKIL--KGKKVKTRCIAIPSSYEMFKQAMN--------RG 338
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ AGC +CG CLGG
Sbjct: 339 YIEDLVNAGC-VVTYGTCGPCLGG 361
>gi|338811173|ref|ZP_08623404.1| 3-isopropylmalate dehydratase large subunit [Acetonema longum DSM
6540]
gi|337276856|gb|EGO65262.1| 3-isopropylmalate dehydratase large subunit [Acetonema longum DSM
6540]
Length = 419
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 195/390 (50%), Gaps = 38/390 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGE--NAKVWDREK 127
T+ +KI S S + G V V VD+ + HD GP I K+F + NAKVWD +K
Sbjct: 4 TIVQKILSCKSNCKDPAVGQIVDVAVDLAIIHDNNGP----IMIKQFADIPNAKVWDPDK 59
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
+ DH+ + RA + ++ F + F P +G+ H +A+
Sbjct: 60 VWFSLDHHSPATSFRAAEHYQDIKRFAAQYGTNIF------------PLGRGIMHPVVAE 107
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
EG RPG V++GTDSHT G+ G FATGIG+T+ VL +GK+ L+VP T++ L G +
Sbjct: 108 EGLARPGNVVVGTDSHTVGLGSLGCFATGIGSTEMAAVLASGKIWLQVPETVKITLTGTL 167
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
+ AKD+ L I+ + G Y ++E G ++ LS+EERM + M +E G KN V
Sbjct: 168 RPGVTAKDISLFILSQFGPHGLNYMAVELGGPVMKALSVEERMAIAIMGLEMGTKNVFVS 227
Query: 308 ADGTTFKYL---EDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
D TF + D L ++P D A + +E +D+S+L+P VA+P P N A E
Sbjct: 228 CDAKTFGKIGGQRDGDQL-WQP---DADAIYAAEKSYDVSELQPFVARPSLPTNGAEVAE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPV 422
I + +GSC+G D + AA++ GKKV V +VP T +V V
Sbjct: 284 VSGTPIHQATLGSCSGAFYHDLVQAAQIL--DGKKVHKDVRFIIVPNTSRV--------V 333
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ + +AG SP+CG C G
Sbjct: 334 EQAARDGIIERLVKAGA-IINSPTCGTCAG 362
>gi|374322101|ref|YP_005075230.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus terrae
HPL-003]
gi|357201110|gb|AET59007.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus terrae
HPL-003]
Length = 417
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 198/391 (50%), Gaps = 35/391 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGEN---AKVWDRE 126
TL EK+ + + + PGD V D M HD+ + F K ++ K E
Sbjct: 4 TLAEKLLIHNTGEKNIKPGDIVIAYPDRYMIHDI-----YTSFLKRALKDMGVTKALHPE 58
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
K VI+ DH + T+ +A + + RD ++ + N + +G+ H +
Sbjct: 59 KAVIVLDHLMPTN--QAATDPEHFRDGI---------ELSEKLNIQNLHKGEGISHSLMH 107
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
+ + +PG V++ TDSHT T G F TGIG+T+ L TG++ LKVP ++ V+DGE
Sbjct: 108 ELRYAKPGNVVVATDSHTTTYGGAACFCTGIGHTEMAAALATGEIWLKVPSAIKIVIDGE 167
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ + AKD+IL+I+G+I G YKS+EF G+ V+ +SM +R T+ NM +EAG K G+
Sbjct: 168 FKNGVSAKDIILRILGDIKSDGGQYKSLEFTGSAVKSMSMNQRFTIANMSLEAGAKCGLF 227
Query: 307 PADGTTFKYLE-DKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC 365
D T Y + D + + + DE A + +++S+LEP ++ P DN
Sbjct: 228 EVDEKTADYYDMDYHEISWLKI--DEDAQYEKVLHYNVSELEPQLSCPQGVDNVHGISAV 285
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP 423
+ K++ VYIGSCT G ED AA++ GKK+ + ++PAT V+ + L
Sbjct: 286 EGTKLNEVYIGSCTNGSIEDMAVAAEIL--KGKKIAKYLKLVIIPATNHVFKESMRLGYI 343
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLGGP 454
+ F +AG + P CG C G P
Sbjct: 344 --------KTFIDAG-GMVSHPCCGLCCGQP 365
>gi|225386744|ref|ZP_03756508.1| hypothetical protein CLOSTASPAR_00492 [Clostridium asparagiforme
DSM 15981]
gi|225047155|gb|EEG57401.1| hypothetical protein CLOSTASPAR_00492 [Clostridium asparagiforme
DSM 15981]
Length = 418
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 193/392 (49%), Gaps = 41/392 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK+ S +P +S G+ V V+VD HD GP + + ++ V+D ++I+
Sbjct: 4 TLVEKLLSEKMGRP-VSAGETVVVDVDFAALHDGSGPLLVRLMNERGYQDDPVFDSDRIL 62
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHI-ALAQE 188
+ + E AN + + R + N + + G H+ A E
Sbjct: 63 FANEFGPVPTREVANEHA-LTRRYACSHNCHW--------------EEGGTGHVHAHVYE 107
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ + G V + DSHT GAFG FATG G+TD V GK +KVP T R ++G +P
Sbjct: 108 DYLKCGSVCIVGDSHTTVHGAFGAFATGCGSTDMVAVTRYGKTWIKVPETFRINVNGALP 167
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD++L++ G I A YK++EF G T+ L M R+T+ +M V+ G K ++
Sbjct: 168 QGVYAKDIMLKLAGIIQSDQAIYKALEFRGDTIHALDMAGRLTITSMGVDVGAKAAIMET 227
Query: 309 DGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T ++L+ Y + DE+A++ D + LEP+VAKPH N LA+ C D
Sbjct: 228 DEHTREFLKKFGREQDYREIRGDEEANYERVIDIDAAALEPMVAKPHYVHNVDLAKNCAD 287
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGS 425
K+D V+IGSCT G+TED AA + GKKV + ++P + V+
Sbjct: 288 QKVDMVFIGSCTNGRTEDLHVAADIL--RGKKVAKGLRLLVIPNSAAVY----------- 334
Query: 426 GGKTCSQ-----IFEEAGCDTPASPSCGACLG 452
K C Q EAG A P+CG C+G
Sbjct: 335 --KECMQDGTLLALAEAGAMIEA-PNCGPCMG 363
>gi|227206404|dbj|BAH57257.1| AT4G13430 [Arabidopsis thaliana]
Length = 175
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 91/95 (95%)
Query: 371 DRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTC 430
DRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDVY LPVPG+GGKTC
Sbjct: 35 DRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPVPGAGGKTC 94
Query: 431 SQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPM 465
+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP
Sbjct: 95 AQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQ 129
>gi|432328277|ref|YP_007246421.1| homoaconitate hydratase family protein [Aciduliprofundum sp.
MAR08-339]
gi|432134986|gb|AGB04255.1| homoaconitate hydratase family protein [Aciduliprofundum sp.
MAR08-339]
Length = 408
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 194/391 (49%), Gaps = 40/391 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T+ EKI +E+ ++ PG VW+++DI+ + GP +K F N V
Sbjct: 3 TIVEKILQAHTEE-KVEPGKIVWIDLDIITAREFGGPNVVKHLRKHFSGN--------YV 53
Query: 130 IIPDHYIFTSDERANRNV-------DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
P FT D DI R F E I+ F DI +G+
Sbjct: 54 AKPQSTFFTFDLSVPAKTLKYALAQDICRKFAKEAGIRVF-DIN-----------QGIGT 101
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
L G +PG +GTDSH GA G F G+G+ D F TGK +VP T++ V
Sbjct: 102 HVLIDRGVVKPGMTAVGTDSHYNILGAVGVFGQGMGDKDIAFAFKTGKTWFEVPNTMKIV 161
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
++G+ +A+DL ++ E+ AGA +++E+ G ++ LS++ R+TL + E GG
Sbjct: 162 VEGKYSWPAVARDLTFAVMRELGPAGALGRAIEYYGGAIDALSIDGRITLASQTTEMGGI 221
Query: 303 NGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALA 362
G P D T K D + ++P+ +D+ A ++ E D++ LEPL+A P +P N
Sbjct: 222 VGFTPMD-TKLKAFYDAKGMDFKPIQADKDAEYVEEVHIDVNNLEPLMAAPPNPCNVKPL 280
Query: 363 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPV 422
E + ++ID +IGSCT G+ ED +AAAKV GKKVKVP + P T+++W+ +
Sbjct: 281 SEFEGMEIDGAFIGSCTNGRYEDLVAAAKV--LKGKKVKVPLTITPTTREIWLRLMR--- 335
Query: 423 PGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
+ +IF EAG +P CG C G
Sbjct: 336 -----EGIWEIFAEAGA-VLTNPGCGGCAEG 360
>gi|359754995|gb|AEV59694.1| 3-isopropylmalate dehydratase large subunit [uncultured archaeon]
Length = 403
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 187/388 (48%), Gaps = 45/388 (11%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA---KVWDRE 126
TL+E+I + P G V VD+ HD GI +E ++ +
Sbjct: 3 TLSERIL----DAPA---GTYVDREVDLAFAHD-----GTGILAREALREMGVERLAHPK 50
Query: 127 KIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALA 186
++ +I DH + + A LR++ + + D G G+CH L+
Sbjct: 51 RLRLIFDHIVPANTGMAATLQAELREYARTTGVA----LSDAGG--------GICHQVLS 98
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
EG RPG ++ G DSH+CT GA G FATG+G TD + +G +VP T+ L G
Sbjct: 99 -EGVVRPGTIVAGADSHSCTLGALGAFATGMGATDMAAIWASGATWFRVPETIAVCLSGR 157
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+ KD+ L ++ + GATY+++EFVG +SM+ R+TLCNM VE G K G+
Sbjct: 158 LSGAADPKDVALTYAAKLGMEGATYRALEFVGDGAADISMDGRLTLCNMAVETGAKTGLF 217
Query: 307 PADGTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
ADG T ++L D + P P E+ + E D+S + PLVA PH D A E
Sbjct: 218 YADGVTLRHLADHGVAASPQAP----EECRYEQEIDIDLSDIVPLVAVPHRVDTVCEAEE 273
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
ID+V++G+CT G+ +D A++ GK+V V T ++PA++ V +
Sbjct: 274 VAGTHIDQVFVGTCTNGRYDDLFRFAEIV--RGKRVAVRTLVIPASRAVLARAIATGILA 331
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+AGC A+P CG CLG
Sbjct: 332 D--------IVDAGC-MVATPGCGPCLG 350
>gi|88603062|ref|YP_503240.1| 3-isopropylmalate dehydratase [Methanospirillum hungatei JF-1]
gi|88188524|gb|ABD41521.1| 3-isopropylmalate dehydratase, large subunit [Methanospirillum
hungatei JF-1]
Length = 404
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 193/384 (50%), Gaps = 35/384 (9%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
+TL+EKI + G + ++D HD G + I+ + + + +
Sbjct: 2 VTLSEKILGAPA-------GTYIDRHIDRAFCHDGTGIQAKIIYDAMGAPG--IANPDSV 52
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
II DH ++ + LR E + +F+DI G+CH +A E
Sbjct: 53 YIIYDHIAPANNSQTAELQAELRTLARECGV-HFWDIG-----------SGICHQVMA-E 99
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PGEV++G DSH+CT GA G FATG+G +D + +G+ L+VP ++ L G +
Sbjct: 100 GQVAPGEVVIGADSHSCTLGALGAFATGVGASDMAGIWVSGETWLRVPDSIGIHLSGSLK 159
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ KD+ L + + + GATY ++EF+G + + ME R+TLCNM VEAG K G+ A
Sbjct: 160 QGVEWKDVALTYVARLGMDGATYAALEFIGESTPSVPMEGRLTLCNMAVEAGAKTGLFYA 219
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
D T +YL + S+P P+ E ++ + D++ +EP+ A PH D
Sbjct: 220 DKETERYLAEY-SVPC-PMQVLENPDYVQDCYLDLADIEPVCAVPHRVDTVQPVPALAGT 277
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+V+IG+CT G+ ED AA++ G++VKV T +VPA+++ ++ V
Sbjct: 278 HLDQVFIGTCTNGRFEDLARAARIL--KGRRVKVRTIVVPASERDFLKAILSGVAAD--- 332
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
+AGC T P CG CLG
Sbjct: 333 -----LVQAGC-TIGPPGCGPCLG 350
>gi|407976704|ref|ZP_11157601.1| isopropylmalate isomerase large subunit [Nitratireductor indicus
C115]
gi|407427831|gb|EKF40518.1| isopropylmalate isomerase large subunit [Nitratireductor indicus
C115]
Length = 471
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 193/409 (47%), Gaps = 75/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS--------DERANRN 146
+D + H+V P +F + + V EK + + DH + TS +E +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---SRAVRHPEKTLAVVDHNVPTSPDRKFGIKNEESRIQ 85
Query: 147 VDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
VD L + I+Y+ AN + +G+ HI ++G PG ++ DSHT T
Sbjct: 86 VDALARNAADFGIEYY---------DANDERQGIVHIVGPEQGFTLPGMTIVCGDSHTST 136
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG A GIG ++ VL T ++ + + +DG++PD + AKD+IL IIGEI
Sbjct: 137 HGAFGALAHGIGTSEVEHVLATQTLIQRRAKNMLIQVDGKLPDGVTAKDIILAIIGEIGT 196
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--- 323
AG T ME+ G + LSME RMT+CNM +E G + G++ D TT+ Y++D+ P
Sbjct: 197 AGGTGHVMEYAGEAIRALSMEGRMTVCNMSIEGGARAGLIAPDETTYAYIQDRPRAPKGK 256
Query: 324 --------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------- 358
++ + ++E A F R D + L P+V SP++
Sbjct: 257 AWDLARAYWDTLNTEEGAEFDRIVRLDAANLPPIVTWGSSPEDVVSITGVVPNPDDIADE 316
Query: 359 -------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KV 402
RAL + D+ IDRV+IGSCT G+ ED AAAKV A GKKV +V
Sbjct: 317 TKRISKKRALEYMGLNAGTKITDIAIDRVFIGSCTNGRIEDLRAAAKV--AEGKKVNDRV 374
Query: 403 PTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
+VP + L + + +IF+ AG D P C CL
Sbjct: 375 NAMIVPGS--------GLVKAQAEAEGLDKIFKAAGFDW-REPGCSMCL 414
>gi|91974984|ref|YP_567643.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
BisB5]
gi|123749439|sp|Q13DU7.1|LEUC_RHOPS RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|91681440|gb|ABE37742.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris BisB5]
Length = 470
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 193/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 31 IDRHLVHEVTSPQAFEGLRTA---GRKVHSPEKTLAVVDHNVPTTD-RSKPNPD---PES 83
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G + + +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 84 AEQIAALAENARDFGVTYYNEHDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 143
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + AKD+IL IIGEI AG T
Sbjct: 144 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGDLPDGVTAKDIILAIIGEIGTAGGTGY 203
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D + YL+ + P
Sbjct: 204 VLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLIAPDEKAYAYLKGRPMAPTGANWDAAM 263
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SDE A F E R D + L P+V SP++
Sbjct: 264 RYWDTLRSDEGAHFDHELRLDAAALPPIVTWGTSPEDVISITGRVPNPADIADEAKRLSK 323
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 324 ERALAYMGLTPGTRITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVN--------- 372
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF +AG + P C CL D A
Sbjct: 373 ----GNVSAMIVPGSGLVKEQAEAEGLDKIFVKAGFEW-REPGCSMCLAMNPDKLA 423
>gi|220921417|ref|YP_002496718.1| isopropylmalate isomerase large subunit [Methylobacterium nodulans
ORS 2060]
gi|219946023|gb|ACL56415.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium
nodulans ORS 2060]
Length = 470
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 201/439 (45%), Gaps = 86/439 (19%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI+ Q P + +D + H+V P +F + +V EK +
Sbjct: 5 TLYDKIWDDHVVDRQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRLA---GRRVRHPEKTL 59
Query: 130 IIPDHYIFTSDE-------RANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+ DH + TSD + ++ L E I+Y YD D +G+ H
Sbjct: 60 AVVDHNVQTSDRSFGIEDPESRTQIETLAANVREFGIEY-YDALD--------RRQGIVH 110
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
I ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++ K +R
Sbjct: 111 IIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVT 170
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
+DG +P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E G +
Sbjct: 171 VDGRLPPGVTAKDIILAIIGEIGTAGGTGHVLEYAGEAIRSLSMEGRMTICNMSIEGGAR 230
Query: 303 NGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVA 351
G+V D TTF Y++D+ P +E + +DE A F E R D + L P+V
Sbjct: 231 AGLVAPDETTFAYVKDRPKAPKGAAFDRARAYWESLATDEGAHFDREVRLDAANLPPIVT 290
Query: 352 KPHSPDN------------------------RALA-------RECKDVKIDRVYIGSCTG 380
SP++ +ALA ++ ++ +DRV+IGSCT
Sbjct: 291 WGTSPEDVISVQGRVPDPAAIADENVRRSKEQALAYMGLAPGQKITEIGLDRVFIGSCTN 350
Query: 381 GKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQI 433
G+ ED AK + G+KV +V + VPGSG + +++
Sbjct: 351 GRIEDLRVVAK--MVEGRKVH-------------PNVSAMVVPGSGLVKQQAEAEGIAKV 395
Query: 434 FEEAGCDTPASPSCGACLG 452
EAG D P C CLG
Sbjct: 396 LIEAGFDW-REPGCSMCLG 413
>gi|27375599|ref|NP_767128.1| isopropylmalate isomerase large subunit [Bradyrhizobium japonicum
USDA 110]
gi|39931540|sp|Q89X34.1|LEUC2_BRAJA RecName: Full=3-isopropylmalate dehydratase large subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|27348736|dbj|BAC45753.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobium
japonicum USDA 110]
Length = 468
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 189/413 (45%), Gaps = 84/413 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV EK + + DH + T+D + +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTDRTKPNPDPESIEQI 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E I+Y+ + +G+ H+ ++G PG ++ DSHT T
Sbjct: 86 KALADNAREFGIEYYNEFDK---------RQGIVHVIGPEQGFTLPGTTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI A
Sbjct: 137 GAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +E G + G+V D + +L D+ P
Sbjct: 197 GGTGYVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAYDFLRDRPKAPKGAA 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E + SD+ A F E R D +KL P+V SP++
Sbjct: 257 WDAAMRYWEKLRSDDGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGIVPDPDKIADEA 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK+V
Sbjct: 317 KRLSKHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKQVSA--- 371
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF +AG + P C CL
Sbjct: 372 ----------SVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 413
>gi|146303613|ref|YP_001190929.1| 3-isopropylmalate dehydratase large subunit [Metallosphaera sedula
DSM 5348]
gi|172046908|sp|A4YF03.1|LEUC_METS5 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|145701863|gb|ABP95005.1| 3-isopropylmalate dehydratase, large subunit [Metallosphaera sedula
DSM 5348]
Length = 415
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 185/384 (48%), Gaps = 26/384 (6%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS K +SPGD + DI+ HD+ G + +K K++D+ KIV
Sbjct: 4 TLTEKILSRASGK-TVSPGDVIEAKTDIVAFHDLTGYHVIEVMEK--ANMMKIFDKTKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH D R+ +R F E + F+DI G+ H L E
Sbjct: 61 VAFDHLAPPPDVRSAEIQGNIRKFVKEMRLPNFHDIN-----------VGILH-ELLIEQ 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT T+GA G FA G+G +D + TGK L VP + L G
Sbjct: 109 YALPGQVIVAADSHTTTSGAVGAFAQGMGASDVAAAVITGKTWLVVPQPFKVTLKGNPGK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+++G+ S+E + M+ R T+ NM +E + D
Sbjct: 169 WINGKDVALELLGKFKADYFNGMSIEVHVENPKAFPMDYRATVSNMGIEMNADALMFVPD 228
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T Y++ E V D A +L E+ ++ KLEPLVA P+S DN ARE V
Sbjct: 229 VETKDYIKTMRGKEVELVTPDPGAKYLDEHTIELDKLEPLVAAPYSVDNVKTAREESKVP 288
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+VYIGSCT G+ DF A+++ GKKVK +P++ ++ +
Sbjct: 289 VDQVYIGSCTNGRLSDFRIASEIL--KGKKVKTRCIAIPSSYTMFKQAMEM--------G 338
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ AGC +CG CLGG
Sbjct: 339 YIEDLVNAGCVVTYG-TCGPCLGG 361
>gi|337280581|ref|YP_004620053.1| alpha-IPM isomerase [Ramlibacter tataouinensis TTB310]
gi|334731658|gb|AEG94034.1| Alpha-IPM isomerase [Ramlibacter tataouinensis TTB310]
Length = 416
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 176/349 (50%), Gaps = 15/349 (4%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKK-EFGENAKVWDREKIV 129
+ EK+ SRA+ +P + G+ V VD M D P + ++ G REK+
Sbjct: 1 MAEKLLSRAAGRP-VRAGEVVVCEVDAAMGTDGSVPMALDYLRQISDGPLPAPARREKLF 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DHY S ERA ++Q + + + + F+ +G+ H + + G
Sbjct: 60 FAMDHYGGLSGERA---------LALQQTARGYARLHGIALFEVG---EGIGHQLMIERG 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
H PG +++ DSH + GA F TGIG++D VL G+V LKVP +LR L G++
Sbjct: 108 HVLPGRLVVAADSHAVSYGALNAFGTGIGSSDFAGVLACGQVWLKVPASLRVELTGQLRA 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+ L + + GA Y ++EF G + L M++R+ L NM VE G K G+ P D
Sbjct: 168 GVSAKDVALTLARRLGADGAGYLALEFGGPGLAHLDMDDRILLANMSVEMGAKAGLFPFD 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +L +T+ ++PV +DE A + D+ + P VA PH DN +V
Sbjct: 228 ACTRAFLAQRTADDFQPVAADEGAGYSGTLALDLGDVVPQVALPHRVDNVQDLAGTAEVP 287
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV-PATQKVWMDV 417
+D VY+G+CTGG+ +D+ A V A G T +V PA++ + ++
Sbjct: 288 VDLVYLGTCTGGRAKDYREALDVLRAGGGVAPGVTLVVTPASESIRAEL 336
>gi|126178584|ref|YP_001046549.1| 3-isopropylmalate dehydratase [Methanoculleus marisnigri JR1]
gi|125861378|gb|ABN56567.1| 3-isopropylmalate dehydratase, large subunit [Methanoculleus
marisnigri JR1]
Length = 403
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 183/389 (47%), Gaps = 47/389 (12%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL+E I + G+ V VDI HD G+ +E V +R
Sbjct: 3 TLSEAILGAPA-------GEYVDREVDIAFAHD-----GTGVLAREALREMGV-ERLPHP 49
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
E++ ++ DH + + LR++ I + D G G+CH +
Sbjct: 50 ERLRLVFDHIVPANTGTTATLQAELREYAGVSGIA----LSDAGG--------GICHQVM 97
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
EG RPG V++G DSHTCT GAFG FATG+G TD + +G+ +VP T+ L G
Sbjct: 98 G-EGVVRPGMVVVGADSHTCTLGAFGAFATGVGATDMAAIWASGETWFRVPETIAVNLSG 156
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ KD+ L + E+ + GATY+++EFVG +SM+ R+TL NM VE G K G+
Sbjct: 157 RLSGAAEPKDVALAYVAELGMEGATYRALEFVGDGAAGISMDGRLTLSNMAVETGAKTGM 216
Query: 306 VPADGTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
AD T +YL D T+ P P E + D+ + PLVA PH D A
Sbjct: 217 FYADAVTVRYLADYGVTASPQAP----EDCRYERTVEIDLDDIVPLVAVPHRVDTVREAE 272
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
E +D+V++G+CT G+ ED A++ GKKV V T + PA++ V V
Sbjct: 273 EVAGTHLDQVFVGTCTNGRYEDLARFARIV--RGKKVAVRTLVFPASRSVLARAIATGVL 330
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+AGC SP CG CLG
Sbjct: 331 AD--------IVDAGC-VVGSPGCGPCLG 350
>gi|86747474|ref|YP_483970.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
HaA2]
gi|123293286|sp|Q2J3A1.1|LEUC_RHOP2 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|86570502|gb|ABD05059.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris HaA2]
Length = 470
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 193/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 31 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 83
Query: 155 MEQNIKYFYDIKDLGNFKANP--DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G N +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 84 AEQIAALAENARDFGVTYYNEFDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 143
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + AKD+IL IIGEI AG T
Sbjct: 144 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGDLPDGVTAKDIILAIIGEIGTAGGTGY 203
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D + YL+ + P
Sbjct: 204 VLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLIAPDEKAYAYLKGRPMAPTGAHWDAAM 263
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SDE A F E R D + L P+V SP++
Sbjct: 264 RYWDTLRSDEGAHFDHELRLDAAALPPIVTWGTSPEDVISVTGKVPNPADIADEAKRLSK 323
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 324 ERALAYMGLTPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------- 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF +AG + P C CL D A
Sbjct: 374 -----NVNAIIVPGSGLVKEQAEAEGLDKIFVKAGFEW-REPGCSMCLAMNPDKLA 423
>gi|383768626|ref|YP_005447689.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobium sp.
S23321]
gi|381356747|dbj|BAL73577.1| 3-isopropylmalate dehydratase large subunit 2 [Bradyrhizobium sp.
S23321]
Length = 468
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 194/417 (46%), Gaps = 76/417 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTD-RTKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F I+ F +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKALAENAKEF-GIEYYNEFDKR---QGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G ++ LSME RMT+CNM +E G + G+V D F +L + P
Sbjct: 201 YVLEYAGDAIQALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLRGRPKAPKGADWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWEKLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGFVPDPDKIADEAKRLS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DR++IGSCT G+ ED AAAK+ A GK+V
Sbjct: 321 KHRALKYMGLTAGTKITDIKVDRIFIGSCTNGRIEDLRAAAKI--AEGKQVS-------- 370
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 -----GHVNAMVVPGSGLVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|379003029|ref|YP_005258701.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Pyrobaculum oguniense TE7]
gi|375158482|gb|AFA38094.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Pyrobaculum oguniense TE7]
Length = 415
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 185/384 (48%), Gaps = 27/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T TE IF R + + SPGD V V D++ HD+ G + E +V+D EK+V
Sbjct: 3 TWTEYIFYRKTGR-YPSPGDVVEVAPDLVGFHDLTGYHVLEVL--EHMGKVEVFDNEKVV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH ++RA + +R + +F+D+ G+ H + E
Sbjct: 60 VAFDHLSPPPNQRAAEIMVYIRRHVKSLGLPHFFDVGG-----------GILH-QIILER 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ DSH TAGA G FA G+G TD L GK L VP R + GE P
Sbjct: 108 YAMPGQVIFTADSHGNTAGAVGAFAHGMGATDIAAALKLGKTWLVVPAPFRVDVRGEFPL 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L ++G+ G S+E + M++R T+ NM E G + D
Sbjct: 168 GVMGKDVALHLLGQFGAEGFNGYSVEVFVERPKVFPMDDRATVANMSTEMGADALMFIPD 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL+ + Y P S E + +Y ++ +LEPLVA PHS DN RE + V+
Sbjct: 228 AVTAEYLKTARGVDYTPP-SLEPGYYADKYTVELGRLEPLVAAPHSVDNVKTVREVEGVE 286
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V+IGSCT G+ D AA++ G++VK +PA+ +V+ L
Sbjct: 287 VDQVFIGSCTNGRLSDIATAARIL--KGRRVKTRCIAIPASYEVFKTAMKL--------G 336
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ EAGC +CG CLGG
Sbjct: 337 YIDVLTEAGCVVTYG-TCGPCLGG 359
>gi|75676969|ref|YP_319390.1| isopropylmalate isomerase large subunit [Nitrobacter winogradskyi
Nb-255]
gi|85540635|sp|Q3SNV3.1|LEUC_NITWN RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|74421839|gb|ABA06038.1| 3-isopropylmalate dehydratase, large subunit [Nitrobacter
winogradskyi Nb-255]
Length = 468
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 194/410 (47%), Gaps = 74/410 (18%)
Query: 93 VNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRD 152
+ +D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 27 IYIDRHLVHEVTSPQAFEGLRVA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---P 79
Query: 153 FCMEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAF 210
EQ + +D G + +G+ H+ ++G PG ++ DSHT T GAF
Sbjct: 80 ESAEQIAALAQNARDFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAF 139
Query: 211 GQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGAT 270
G A GIG ++ VL T ++ K +R V+DG++PD + AKD+IL IIGEI AG T
Sbjct: 140 GALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKLPDGVTAKDIILAIIGEIGTAGGT 199
Query: 271 YKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP------- 323
+E+ G + LSME RMT+CNM +E G + G++ D T +++L+ + P
Sbjct: 200 GYVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLIAPDETAYEFLKGRPKAPKGADWDA 259
Query: 324 ----YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN--------------------- 358
+E + SD+ A F E R D +KL P+V SP++
Sbjct: 260 ALRYWETLRSDDGAHFDHEIRLDAAKLPPIVTWGTSPEDVIAVTGKVPDPAAIEDEAKRL 319
Query: 359 ---RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVP 408
RAL + D+++DRV+IGSCT G+ ED AAAK+ A G+ V
Sbjct: 320 SKERALHYMGLLPGTKITDIRLDRVFIGSCTNGRIEDLRAAAKI--AEGRTVN------- 370
Query: 409 ATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
+V + VPGSG + +IF AG + P C CL
Sbjct: 371 ------GNVSAMVVPGSGLVKEQAEAEGLDKIFTRAGFEW-REPGCSMCL 413
>gi|393769245|ref|ZP_10357773.1| isopropylmalate isomerase large subunit [Methylobacterium sp. GXF4]
gi|392725486|gb|EIZ82823.1| isopropylmalate isomerase large subunit [Methylobacterium sp. GXF4]
Length = 470
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 199/443 (44%), Gaps = 94/443 (21%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI+ + P + +D + H+V P +F + KV EK +
Sbjct: 6 TLYDKIWD--DHVVDVQPDGTSLLYIDRHLVHEVTSPQAFEGLRVA---GRKVRHPEKTL 60
Query: 130 IIPDHYIFTSDERANRN-----------VDILRDFCMEQNIKYFYDIKDLGNFKANPDYK 178
+ DH + T+D + + +RDF +E FYD D +
Sbjct: 61 AVVDHNVQTTDRSKGIDDPESRTQLEALAENVRDFGIE-----FYDALDR--------RQ 107
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++ K
Sbjct: 108 GIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLVQKKAKN 167
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
+R +DG +P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E
Sbjct: 168 MRVTVDGALPPGVGAKDIILAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTICNMSIE 227
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLE 347
G + G+V D TT+ Y++D+ P +E + +DE A F E R D + L
Sbjct: 228 GGARAGLVAPDATTYAYVKDRPKAPKGAAFDKARAYWESLLTDEGAFFDREVRLDAASLP 287
Query: 348 PLVA-----------KPHSPDNRALARECK--------------------DVKIDRVYIG 376
P+V+ + PD A+A E K D+ +DRV+IG
Sbjct: 288 PIVSWGTSPEDVISVRGRVPDPAAIADENKRQSKEKALAYMGLTPGTPITDITLDRVFIG 347
Query: 377 SCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKT 429
SCT G+ ED A+ + G+KV V + VPGSG +
Sbjct: 348 SCTNGRIEDLRVVAQ--MVEGRKVH-------------ESVSAMVVPGSGLVKAQAEAEG 392
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
++ + AG D P C CLG
Sbjct: 393 IDRVLKAAGFDW-REPGCSMCLG 414
>gi|365900446|ref|ZP_09438319.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. STM 3843]
gi|365418822|emb|CCE10861.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. STM 3843]
Length = 468
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 191/409 (46%), Gaps = 76/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTD-RTKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F I+ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKALAENAKEF-GIEYYNEFDRR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++P+ + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGQLPEGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D F +L D+ P
Sbjct: 201 YVLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLRDRPKAPKGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWEKLRSDEGAHFDHEIRLDAAKLPPIVTWGTSPEDVISVTGIVPDPDKIADEAKRLS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLAAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVSP------- 371
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF +AG + P C CL
Sbjct: 372 ------HVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 413
>gi|170747198|ref|YP_001753458.1| isopropylmalate isomerase large subunit [Methylobacterium
radiotolerans JCM 2831]
gi|226735980|sp|B1LXK9.1|LEUC_METRJ RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|170653720|gb|ACB22775.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium
radiotolerans JCM 2831]
Length = 470
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 198/443 (44%), Gaps = 94/443 (21%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI+ + P + + +D + H+V P +F + KV EK +
Sbjct: 6 TLYDKIWD--DHVVDVQPDGSSLLYIDRHLVHEVTSPQAFEGLRVA---GRKVRHPEKTL 60
Query: 130 IIPDHYIFTSDERANRN-----------VDILRDFCMEQNIKYFYDIKDLGNFKANPDYK 178
+ DH + TSD + + +RDF +E FYD D +
Sbjct: 61 AVVDHNVQTSDRSQGIDDPESRTQLEALAENVRDFGIE-----FYDALDR--------RQ 107
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++ +
Sbjct: 108 GIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLVQRKARN 167
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
+R +DG +P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E
Sbjct: 168 MRVSVDGTLPPGVTAKDIILAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTICNMSIE 227
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLE 347
G + G+V D TTF Y++D+ P +E + +D A F E R D + L
Sbjct: 228 GGARAGMVAPDATTFAYVKDRPKAPKGAAFDAARRYWESLVTDAGAHFDREVRLDAANLP 287
Query: 348 PLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYIG 376
P+V+ SP++ +ALA D+ +DR++IG
Sbjct: 288 PIVSWGTSPEDVISVQGRIPDPSEIADENKRQSKEKALAYMGLTPGTRITDITLDRIFIG 347
Query: 377 SCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKT 429
SCT G+ ED A+V +KV V + VPGSG +
Sbjct: 348 SCTNGRIEDLREVARVV---------------GDRKVHEGVSAMIVPGSGLVKAQAEAEG 392
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
+I + AG D P C CLG
Sbjct: 393 LDKILKAAGFDW-REPGCSMCLG 414
>gi|398821120|ref|ZP_10579606.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
YR681]
gi|398228215|gb|EJN14351.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
YR681]
Length = 468
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 189/413 (45%), Gaps = 84/413 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV EK + + DH + T+D + +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTDRTKPNPDPESIEQI 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E I+Y+ + +GV H+ ++G PG ++ DSHT T
Sbjct: 86 KALADNAKEFGIEYYNEFDR---------RQGVVHVIGPEQGFTLPGTTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI A
Sbjct: 137 GAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G ++ LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 197 GGTGYVLEYAGDAIQALSMEGRMTVCNMSIEGGARAGLVAPDQKAYDFLRGRPKAPKGAD 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E + SDE A F +E R D +KL P+V SP++
Sbjct: 257 WDAAMRYWERLRSDEGAHFDNELRLDAAKLPPIVTWGTSPEDVISVTGSVPDPDKIADEA 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + D+K+DR++IGSCT G+ ED AAAK+ A GK V
Sbjct: 317 KRISKHRALKYMGLTAGTKITDIKVDRIFIGSCTNGRIEDLRAAAKI--AEGKTVSA--- 371
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF +AG + P C CL
Sbjct: 372 ----------HVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 413
>gi|333396198|ref|ZP_08478015.1| 3-isopropylmalate dehydratase, large subunit [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
Length = 457
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 206/429 (48%), Gaps = 72/429 (16%)
Query: 68 AMTLTEKIFSR-----ASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
A T+ +KI+ + + +PQL + VD+ + H+V P +F ++ N V
Sbjct: 2 AQTMFDKIWDKHVITGEAGQPQL-------IYVDLHLVHEVTSPQAFEGLREN---NRTV 51
Query: 123 WDREKIVIIPDHYIFTSD------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPD 176
E+ DH + T D + + +D LR C E ++ + LG+ +
Sbjct: 52 RRPERTFATMDHNVPTEDIFNVKDVISRKQMDTLRKNCEEFGVR----LAALGDRQ---- 103
Query: 177 YKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVP 236
+G+ H Q G +PG+V++ DSHT T GAFG A GIG ++ V T + P
Sbjct: 104 -QGIIHAISPQLGLTQPGQVVVCGDSHTSTHGAFGSIAFGIGTSEVEHVFATQTIWQSKP 162
Query: 237 PTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMV 296
T+ + G++P + AKDLI+ +I + V T ++EF G T++R+SMEERMT+CNMV
Sbjct: 163 KTMGIHVTGKLPQGVYAKDLIMALIAQNGVDFGTGYAIEFYGDTIDRMSMEERMTICNMV 222
Query: 297 VEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSDEKASFLSEYRFDISKLE 347
+E G K+G++ D TTF Y+ + P + Y+D++++F +Y FD ++L
Sbjct: 223 IEGGAKSGIIKPDQTTFNYVAGREYAPQDMAAASEYWSQFYTDDESAFDKQYDFDATQLA 282
Query: 348 PLVAKPHSP----------------------DNRALA--RECKDVKIDRVYIGSCTGGKT 383
P V+ +P D L + +D+ + V+IGSCT G+
Sbjct: 283 PYVSWGTNPGMAVPIDQPFPEPVDINMQKAYDYEGLKPNGQARDIDLGFVFIGSCTNGRL 342
Query: 384 EDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPA 443
D AA + V +VPA++ + + + ++IF++AGC+
Sbjct: 343 SDLEIAANIMRGRKIAPNVTALVVPASRAIRDEAER--------RGYAKIFQDAGCEW-R 393
Query: 444 SPSCGACLG 452
P C ACLG
Sbjct: 394 EPGCSACLG 402
>gi|420144878|ref|ZP_14652358.1| 3-isopropylmalate dehydratase large subunit [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403570|gb|EJN56807.1| 3-isopropylmalate dehydratase large subunit [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 457
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 206/429 (48%), Gaps = 72/429 (16%)
Query: 68 AMTLTEKIFSR-----ASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
A T+ +KI+ + + +PQL + VD+ + H+V P +F ++ N V
Sbjct: 2 AQTMFDKIWDKHVITGEAGQPQL-------IYVDLHLVHEVTSPQAFEGLREN---NRTV 51
Query: 123 WDREKIVIIPDHYIFTSD------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPD 176
E+ DH + T D + + +D LR C E ++ + LG+ +
Sbjct: 52 RRPERTFATMDHNVPTEDIFNVKDVISRKQMDTLRKNCEEFGVR----LAALGDRQ---- 103
Query: 177 YKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVP 236
+G+ H Q G +PG+V++ DSHT T GAFG A GIG ++ V T + P
Sbjct: 104 -QGIIHAISPQLGLTQPGQVVVCGDSHTSTHGAFGSIAFGIGTSEVEHVFATQTIWQSKP 162
Query: 237 PTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMV 296
T+ + G++P + AKDLI+ +I + V T ++EF G T++R+SMEERMT+CNMV
Sbjct: 163 KTMGIHVTGKLPQGVYAKDLIMALIAQNGVDFGTGYAIEFYGDTIDRMSMEERMTICNMV 222
Query: 297 VEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSDEKASFLSEYRFDISKLE 347
+E G K+G++ D TTF Y+ + P + Y+D++++F +Y FD ++L
Sbjct: 223 IEGGAKSGIIRPDQTTFNYVAGREYAPQDMAAASEYWSQFYTDDESAFDKQYDFDATQLA 282
Query: 348 PLVAKPHSP----------------------DNRALA--RECKDVKIDRVYIGSCTGGKT 383
P V+ +P D L + +D+ + V+IGSCT G+
Sbjct: 283 PYVSWGTNPGMAVPIDQPFPEPVDINMQKAYDYEGLKPNGQARDIDLGFVFIGSCTNGRL 342
Query: 384 EDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPA 443
D AA + V +VPA++ + + + ++IF++AGC+
Sbjct: 343 SDLEIAANIMRGRKIAPNVTALVVPASRAIRDEAER--------RGYAKIFQDAGCEW-R 393
Query: 444 SPSCGACLG 452
P C ACLG
Sbjct: 394 EPGCSACLG 402
>gi|374571997|ref|ZP_09645093.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
WSM471]
gi|374420318|gb|EHQ99850.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
WSM471]
Length = 468
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 191/421 (45%), Gaps = 84/421 (19%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV EK + + DH + T+D + +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTDRTKPNPDPESIEQI 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E I+Y YD D +GV H+ ++G PG ++ DSHT T
Sbjct: 86 KALADNAREFGIEY-YDEFD--------KRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI A
Sbjct: 137 GAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +E G + G+V D F +L + P
Sbjct: 197 GGTGYVLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLHGRPKAPKGAD 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 257 WDAAMRYWEKLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGSVPDPDKIADEA 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + D+K+DR++IGSCT G+ ED AAAK+ A GK+V
Sbjct: 317 KRLSKHRALKYMGLTAGTKITDIKLDRIFIGSCTNGRIEDLRAAAKI--AEGKQVA---- 370
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTY 458
V + VPGSG + +IF +AG + P C CL D
Sbjct: 371 ---------GGVNAMVVPGSGLVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKL 420
Query: 459 A 459
A
Sbjct: 421 A 421
>gi|254568318|ref|XP_002491269.1| Isopropylmalate isomerase, catalyzes the second step in the leucine
biosynthesis pathway [Komagataella pastoris GS115]
gi|238031066|emb|CAY68989.1| Isopropylmalate isomerase, catalyzes the second step in the leucine
biosynthesis pathway [Komagataella pastoris GS115]
gi|328352214|emb|CCA38613.1| 3-isopropylmalate dehydratase [Komagataella pastoris CBS 7435]
Length = 783
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 203/454 (44%), Gaps = 91/454 (20%)
Query: 61 TTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA 120
+TG +KN TL +K+F S + + +D + H+V P +F K NA
Sbjct: 3 STGEIKNPKTLYDKVFEDHVVHKDES--GSYLLYIDRHLVHEVTSPQAFEGLK-----NA 55
Query: 121 KVWDREK--IVIIPDHYIFTSDERANRNVDILRDF-----------CMEQNIKYFYDIKD 167
R K + DH I T + +N+ L F +EQN+K F D
Sbjct: 56 GRVVRRKDCTLATVDHNIPTD---SRKNLTTLDKFIKQDDSRLQVKTLEQNVKDF----D 108
Query: 168 LGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLG 227
+ F +G+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL
Sbjct: 109 VTYFGMKDSRQGIVHVVGPEQGFTLPGTTVVCGDSHTSTHGAFGSLAFGIGTSEVEHVLA 168
Query: 228 TGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSME 287
T ++ +R ++GE+ + + +KDL+L +IG I AG T +EF G +E L+ME
Sbjct: 169 TQTIIQAKSKNMRITIEGELDEGITSKDLVLHVIGVIGTAGGTGSVIEFAGKAIEDLTME 228
Query: 288 ERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFL 336
RM++CNM +EAG + G++ D TTFKY+E + P ++ +YSDE A F
Sbjct: 229 ARMSICNMAIEAGARAGMIRPDETTFKYIEGRPLAPKGEQWTKALNYWKTLYSDEGAKFD 288
Query: 337 SEYRFDISKLEPLVAKPHSPDN------------------------RALAR-------EC 365
E + P + SP + RAL+
Sbjct: 289 YEIVIKAKDIVPTITWGTSPQDALPITASVPDPEKVEDPIKKSGMERALSYMGLTPNVPL 348
Query: 366 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGS 425
KD+KID+V+IGSCT + ED AAAKV K V LV VPGS
Sbjct: 349 KDIKIDKVFIGSCTNSRLEDLRAAAKVVKGHKKSDNVKLALV--------------VPGS 394
Query: 426 G-------GKTCSQIFEEAGCDTPASPSCGACLG 452
G + +IFEEAG + C CLG
Sbjct: 395 GLIKLQAEKEGLDKIFEEAGF-SWREAGCSMCLG 427
>gi|374630764|ref|ZP_09703149.1| 3-isopropylmalate dehydratase, large subunit [Methanoplanus
limicola DSM 2279]
gi|373908877|gb|EHQ36981.1| 3-isopropylmalate dehydratase, large subunit [Methanoplanus
limicola DSM 2279]
Length = 403
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 189/384 (49%), Gaps = 37/384 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+EKI G V VD HD G + F+K G K + KI
Sbjct: 3 TLSEKILGG-------KEGSFVDRKVDRAFAHDGTGVLALDSFRKMGG--VKPENPGKIS 53
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
II DH ++ LRDF + FYDI G+CH ++ EG
Sbjct: 54 IIYDHITPANNSTTAELQHELRDFSKSAGVN-FYDIG-----------CGICHQVMS-EG 100
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
CRPGE+++G DSHTCT GAFG FATG+G TD + TG+ KVP T+R L+G++
Sbjct: 101 VCRPGEIVVGADSHTCTLGAFGAFATGVGATDMAAIWETGETWFKVPETIRVNLEGKLTG 160
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD L+ I + + GA+Y ++EF G E L ME R+T+ NM +EAG K G+ +D
Sbjct: 161 HTEAKDAALEYIRMLGMDGASYMALEFTGEGAESLPMEGRLTMSNMAIEAGAKAGLFYSD 220
Query: 310 GTTFKYLEDKTSLPYEPVYSD-EKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +YL L E + E S+ E D+ L P++A PH D +
Sbjct: 221 KVTAEYL---AHLGIESERQNAENPSYAKEIDIDLGILSPMLAVPHRVDTGVPVEKYAGT 277
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+V++G+CT G+ ED A + G+ VKV T +VPA++ V L S G
Sbjct: 278 ALDQVFVGTCTNGRYEDLKRFADIV--RGRTVKVRTVVVPASKSV------LEKAVSTGI 329
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
I AGC +P CG CLG
Sbjct: 330 LLDII--RAGCAV-GTPGCGPCLG 350
>gi|397780883|ref|YP_006545356.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Methanoculleus bourgensis MS2]
gi|396939385|emb|CCJ36640.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
[Methanoculleus bourgensis MS2]
Length = 403
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 185/389 (47%), Gaps = 47/389 (12%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL+E+I + G V +VD+ HD G+ +E V +R
Sbjct: 3 TLSERILGAPA-------GTYVDRDVDLAFAHD-----GTGVLAREALREMGV-ERLPHP 49
Query: 126 EKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIAL 185
E++ +I DH + + LR + + + D G G+CH +
Sbjct: 50 ERLHLIFDHIVPANTGTTATLQAELRRYARSSGVA----LSDAGG--------GICHQVM 97
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+ EG RPG ++ G DSHTCT GAFG FATG+G TD + +G +VP T+ L G
Sbjct: 98 S-EGLVRPGMIVAGADSHTCTLGAFGAFATGVGATDMAAIWASGATWFRVPETIALQLSG 156
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
+ KD+ L + ++ + GATY+++EFVG +SM+ R+TLCNM VE G K G+
Sbjct: 157 RLSGAAEPKDVALTYVAKLGMEGATYRALEFVGDGAAGVSMDGRLTLCNMAVETGAKAGM 216
Query: 306 VPADGTTFKYLEDK--TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363
AD TT +YL + ++ P P E + E D+S + PLVA H D
Sbjct: 217 FYADATTIRYLAEHGVSASPQVP----ENCRYEREVNIDLSDIVPLVAVRHRVDTVREVE 272
Query: 364 ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP 423
E +ID+V++G+CT G+ ED A + G+KV V T ++PA++ V V
Sbjct: 273 EVAGTQIDQVFVGTCTNGRYEDLARFAHIV--RGRKVAVRTLVIPASRAVLSRAIATGVL 330
Query: 424 GSGGKTCSQIFEEAGCDTPASPSCGACLG 452
+AGC + P CG CLG
Sbjct: 331 AD--------IVDAGC-MVSPPGCGPCLG 350
>gi|154150142|ref|YP_001403760.1| 3-isopropylmalate dehydratase [Methanoregula boonei 6A8]
gi|153998694|gb|ABS55117.1| 3-isopropylmalate dehydratase [Methanoregula boonei 6A8]
Length = 403
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 185/383 (48%), Gaps = 35/383 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+E+I A+ G+ V VD HD G + +K E G + ++
Sbjct: 3 TLSERILGAAA-------GEYVDRKVDRAYAHDGTGVLALEAWK-EMGRD-RMGKETGYY 53
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH ++ LR+F ++ + D+G G+CH +A EG
Sbjct: 54 IQFDHIAPANNGLTATLQHELRNFAKRSSMHF----SDVGC--------GICHQLMA-EG 100
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PGE+ +G DSHT GAFG FATG+G TD + TG+ +VP ++ L G +
Sbjct: 101 EVLPGEIAVGADSHTVMLGAFGAFATGVGATDMAAIWLTGETWFRVPESVGIHLTGNLTG 160
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
AKDL L +G++ GATY+++EF+G V LSM+ER L N+ VEAG K G+ AD
Sbjct: 161 AAEAKDLALAYVGKLGTDGATYQALEFIGEGVRHLSMDERFVLSNLSVEAGAKAGLFYAD 220
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL++ Y E S+ E FD++ + PLV+ PH D A V
Sbjct: 221 EVTLRYLKEHGLDTVSQEY--ESCSYCRELDFDLTDIVPLVSVPHRVDTVKPADAVAGVP 278
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V++G+CT G+ D A+ L GKKV V T +VPA+ + V
Sbjct: 279 LDQVFVGTCTNGRYSDLARFAR--LVKGKKVAVRTLVVPASAAILEKAIRTGVLAD---- 332
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
AGC T +P CG CLG
Sbjct: 333 ----IVAAGC-TIGTPGCGPCLG 350
>gi|145592253|ref|YP_001154255.1| 3-isopropylmalate dehydratase large subunit [Pyrobaculum
arsenaticum DSM 13514]
gi|166989752|sp|A4WMI6.1|LEUC_PYRAR RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|145284021|gb|ABP51603.1| 3-isopropylmalate dehydratase, large subunit [Pyrobaculum
arsenaticum DSM 13514]
Length = 415
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 186/384 (48%), Gaps = 27/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T TE IF + + + SPGD V V D++ HD+ G + E +V+D EK+V
Sbjct: 3 TWTEHIFYKKTGRIP-SPGDVVEVAPDLVGFHDLTGYHVLEVL--EHMGKVEVFDNEKVV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH ++RA + +R + +F+D+ G+ H + E
Sbjct: 60 VAFDHLSPPPNQRAAEIMVYIRRHVKSLGLPHFFDVGG-----------GILH-QIILER 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ DSH TAGA G FA G+G TD L GK L VP + + GE P
Sbjct: 108 YAMPGQVIFTADSHGNTAGAVGAFAHGMGATDIAAALKLGKTWLVVPAPFKVEVRGEFPP 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L ++G+ G S+E + M++R T+ NM E G + D
Sbjct: 168 GVMGKDVALHLLGQFGAEGFNGYSVEVFVERPKVFPMDDRATVGNMSTEMGADALMFIPD 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL+ + Y P S E ++ +Y ++ +LEPLVA PHS DN RE + V+
Sbjct: 228 AVTAEYLKTARGVDYTPP-SLEPGNYADKYTVELGRLEPLVAAPHSVDNVKTVREVEGVE 286
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V+IGSCT G+ D AA++ G++VK +PA+ +V+ L
Sbjct: 287 VDQVFIGSCTNGRLRDIATAARIL--KGRRVKTRCIAIPASYEVFKTAMKL--------G 336
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ EAGC +CG CLGG
Sbjct: 337 YIDVLTEAGCVVTYG-TCGPCLGG 359
>gi|218132706|ref|ZP_03461510.1| hypothetical protein BACPEC_00567 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992432|gb|EEC58435.1| putative 3-isopropylmalate dehydratase large subunit [[Bacteroides]
pectinophilus ATCC 43243]
Length = 311
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 144/263 (54%), Gaps = 13/263 (4%)
Query: 192 RPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYL 251
PG+++ G DSHTC+ GA G F TG+G TD + + TGK + VP TLRF L G++ + +
Sbjct: 6 EPGQLIFGADSHTCSYGALGAFGTGVGCTDFLYAMVTGKSWVMVPETLRFNLKGKLREGV 65
Query: 252 LAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGT 311
+DLIL IIG+I GA YK MEF G LS+ +R LCN+ VEAG K G+V D
Sbjct: 66 YPRDLILTIIGDIGANGANYKVMEFAGEGAHNLSVNDRFVLCNLAVEAGAKTGIVEPDEK 125
Query: 312 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKID 371
+++++ SDE A FL Y +D+ K+EP+VA+P D+ + DVKID
Sbjct: 126 VKEFIKEHGRRADNMYVSDEDAKFLKVYEYDLDKIEPVVARPDFVDDVIPLSQVGDVKID 185
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKT 429
++GSC G+ +D AA++ G+KV V + PA+ V++ +
Sbjct: 186 EAFLGSCNNGRIDDLRVAAEIL--KGRKVNPDVRFLIAPASNNVYIQALD--------EG 235
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
IF E+G + +C C G
Sbjct: 236 LIDIFMESGA-MVMNANCSVCWG 257
>gi|389690816|ref|ZP_10179709.1| 3-isopropylmalate dehydratase, large subunit [Microvirga sp.
WSM3557]
gi|388589059|gb|EIM29348.1| 3-isopropylmalate dehydratase, large subunit [Microvirga sp.
WSM3557]
Length = 468
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 191/416 (45%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV +K + + DH + TSD A V
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVRQPQKTLAVVDHNVPTSDRSHGIEDPEAATQV 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L E ++Y+ ++ +G+ H+ ++G PG ++ DSHT T
Sbjct: 86 AALAQNAKEFGVEYYNELDT---------RQGIVHVVGPEQGFTLPGMTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K +R +DG++P + AKD+IL IIGEI A
Sbjct: 137 GAFGSLAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGQLPPGVTAKDIILAIIGEIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +E G + G+V D T+ YL+D+ P
Sbjct: 197 GGTGHVIEYAGEAIRSLSMEGRMTICNMSIEGGARAGMVAPDEKTYAYLKDRPKAPKGEA 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
++ + +DE A F +E R D + L P+V SP++
Sbjct: 257 WDAAVRYWDSLRTDEGAFFDTEIRLDAANLPPIVTWGTSPEDVVSVAGVVPNPDDIQDEN 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVP 403
RAL + D+ +DRV+IGSCT G+ ED A AKV GK+V V
Sbjct: 317 KRRSKWRALEYMGLTPGTKITDIVLDRVFIGSCTNGRIEDLRAVAKVV--EGKRVAESVN 374
Query: 404 TFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+VP + V M + + +IF+ AG D P C CL D A
Sbjct: 375 AMIVPGSGIVKMQ--------AEAEGLDKIFKAAGFDW-REPGCSMCLAMNADRLA 421
>gi|421609443|ref|ZP_16050637.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica SH28]
gi|408499773|gb|EKK04238.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica SH28]
Length = 485
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 209/460 (45%), Gaps = 76/460 (16%)
Query: 48 SVMAPQQSERRPATTGSVKNAMTLTEKIFSRA-SEKPQLSPGDNVWVNVDILMTHDVCGP 106
S AP Q+ +TGS TL +KI+ + P+ P + +D+ + H+V P
Sbjct: 5 SSTAPSQAGAISQSTGS----RTLLDKIWDQHLVHAPESGP---AIIYIDLHLVHEVTSP 57
Query: 107 GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNVDILRDFCMEQNI 159
+F + N V E+ + PDH + TSD + + ++ LR+ C E +
Sbjct: 58 QAFEGLRIN---NRPVRRPERTIATPDHNVPTSDRSLPIADPISRKQIETLRENCKEFGV 114
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
+ F DI D+ +G+ H+ + G+ +PG ++ DSHT T GAFG A GIG
Sbjct: 115 QLF-DIDDV--------RQGIVHVIGPENGYTQPGMTIVCGDSHTATHGAFGSLAFGIGT 165
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
++ VL T +L P T +DGE+ + AKD+IL +IG+I AG T +EF G
Sbjct: 166 SEVEHVLATQTLLQFKPKTFELRVDGELARGVTAKDMILYLIGQIGTAGGTGYVLEFTGD 225
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSD 330
V L+MEERMT+CNM +EAG + G++ D TTF YL + P ++ + SD
Sbjct: 226 AVRNLTMEERMTVCNMSIEAGARAGMIAPDQTTFDYLRGRPECPANFDAAVEAWKKLPSD 285
Query: 331 EKASFLSEYRFDISKLEPLVAKPHSP----------------------DNRALARECKDV 368
A++ + S + P V +P + A A + D+
Sbjct: 286 PGATYDRSNVYKGSDIRPQVTWGTNPGQVCSVDSVVPSPGDSTDVNVQKSTASALQYMDL 345
Query: 369 K---------IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
K I+RV+IGSCT + ED AAA V KV +VP + KV +
Sbjct: 346 KAGTPITEIEINRVFIGSCTNARIEDLRAAAAVIKGHHSSDKVNAMIVPGSGKVKLQAEE 405
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ ++F +AG D + C CL D A
Sbjct: 406 --------EGLHKVFTDAGFDWREA-GCSMCLAMNPDKLA 436
>gi|373459845|ref|ZP_09551612.1| homoaconitate hydratase family protein [Caldithrix abyssi DSM
13497]
gi|371721509|gb|EHO43280.1| homoaconitate hydratase family protein [Caldithrix abyssi DSM
13497]
Length = 607
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 28/387 (7%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
MT+ EKI +R + K + PGD V V +D+ + D GP + K ++ D K
Sbjct: 1 MTIIEKILARHAGKKTVKPGDIVDVEIDVRIARDFGGPN---VVKNLVENGLEIDDPSKT 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
D SD++ N R F E+ IK F +G H A+ +E
Sbjct: 58 FFTFDTNPTGSDQKYAANQHFCRQFAREKGIKVFDINVGIG-----------THTAI-EE 105
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
G PG L+ TDSH GA F G+G+ D V TGK KVPP+ + +L GE P
Sbjct: 106 GLAIPGATLVSTDSHANIVGAVCAFGQGMGDQDIAAVWATGKAWFKVPPSAKLILKGERP 165
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD++L ++ G ++E G VERL+++ER+T+ +M E G +
Sbjct: 166 KGITAKDIVLNLLHHFGANGLLGLAVEVQGEEVERLTLDERITIASMATEMGAIILLFEP 225
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
+ Y E ++ E + +D A + + D+S P+V++P PD+ + V
Sbjct: 226 NDEVMAYCEKRSGKKIEKITADPDAQYDQVFELDLSTFVPMVSRPGHPDDSVDITKIGKV 285
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KID +IGSCT G+ ED AA + G+KV V +VP+T +VW +
Sbjct: 286 KIDSAFIGSCTNGRIEDLRIAASIL--KGRKVAPGVVLKIVPSTDEVWQQMME------- 336
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLGG 453
++ +IF+EAG + C C G
Sbjct: 337 -ESLLKIFKEAGA-LVGNAGCAGCAAG 361
>gi|11061701|emb|CAC14578.1| 2-isopropylmalate isomerase large subunit [Sinorhizobium meliloti]
Length = 448
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 192/408 (47%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 8 IDCHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 61
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + DLG + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 62 RIQVEALARNAADLGVEYYSENDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 121
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 122 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 181
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF+Y++DK P
Sbjct: 182 VIEFAGEAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFEYIKDKPRAPKGEAWDRAV 241
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ ++ DE A + D + L P+V+ SP++
Sbjct: 242 EYWKTLHMDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDDIQDETKRTSK 301
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ IDRV+IGSCT G+ ED A A+V G+KV PT
Sbjct: 302 WRALDYMGLKPGTKITDIAIDRVFIGSCTNGRIEDLRAVAEVV--EGRKVS-PT------ 352
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+EAG D P C CL
Sbjct: 353 ------VSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCL 393
>gi|261420912|ref|YP_003254593.1| isopropylmalate isomerase large subunit [Geobacillus sp. Y412MC61]
gi|319768600|ref|YP_004134100.1| 3-isopropylmalate dehydratase, large subunit [Geobacillus sp.
Y412MC52]
gi|261377370|gb|ACX80111.1| 3-isopropylmalate dehydratase, large subunit [Geobacillus sp.
Y412MC61]
gi|317113466|gb|ADU95957.1| 3-isopropylmalate dehydratase, large subunit [Geobacillus sp.
Y412MC52]
Length = 477
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 205/441 (46%), Gaps = 74/441 (16%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K++ R + PG + +D+ + H+V P +F + KV +
Sbjct: 4 TLFDKLWERHVVIEE--PGQPALIYIDLHLIHEVTSPQAFEGLRLS---GRKVRRPDLTF 58
Query: 130 IIPDHYIFTS-------DERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
DH I T DE A + ++ L C E I + YD+ D N G+ H
Sbjct: 59 ATMDHNIPTVNRSLSSIDEIAAKQIEALIKNCEEFGI-HLYDLNDPNN--------GIVH 109
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
+ + G PG+ ++ DSHT T GAFG +A GIG ++ VL T +L K P T+
Sbjct: 110 VIGPELGLTTPGKTIVCGDSHTSTHGAFGSWAFGIGTSEIEHVLATQTLLQKKPRTMEVH 169
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
L G++P + AKD+IL +I +I AG T +EF G ++ LSM+ERMT+CNM +EAG +
Sbjct: 170 LHGKIPPGVTAKDIILGLIQKIGTAGGTGYVIEFTGPVIKELSMDERMTICNMAIEAGAR 229
Query: 303 NGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVA 351
G++ D TTF YL+ + P ++ + SD A + D+S L P V
Sbjct: 230 AGIIAPDETTFSYLKGRPFAPKGDEWETAVADWKALCSDSGAIYDEIVELDVSNLAPFVT 289
Query: 352 -------------KPHSPDN-----------RALA-------RECKDVKIDRVYIGSCTG 380
K SPD+ +ALA +D+ IDRV+IGSCT
Sbjct: 290 WGTNPGMVVQVNEKVPSPDDFTNPVDRKAVEKALAYMGLKPGTPIQDITIDRVFIGSCTN 349
Query: 381 GKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAG 438
+ ED AA + A GKKV V +VP + +V + + +IF+EAG
Sbjct: 350 SRIEDLRQAAGIVKAVGKKVASGVRALVVPGSYRVKRQ--------AEAEGLDEIFKEAG 401
Query: 439 CDTPASPSCGACLGGPKDTYA 459
+ P C CLG D A
Sbjct: 402 FEW-REPGCSMCLGMNSDILA 421
>gi|421595452|ref|ZP_16039487.1| isopropylmalate isomerase large subunit [Bradyrhizobium sp.
CCGE-LA001]
gi|404272441|gb|EJZ36086.1| isopropylmalate isomerase large subunit [Bradyrhizobium sp.
CCGE-LA001]
Length = 468
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 191/409 (46%), Gaps = 76/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRVT---GRKVHAPEKTLAVVDHNVPTTD-RTKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F I+ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 INALAENAKEF-GIEYYNEFDKR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG +P+ + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGTLPEGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L D+ P
Sbjct: 201 YVLEYAGYAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAYDFLRDRPKAPKGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWEKLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGMVPDPDKIADEAKRIS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVSA------- 371
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
+V + VPGSG + +IF +AG + P C CL
Sbjct: 372 ------NVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 413
>gi|417304753|ref|ZP_12091759.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica WH47]
gi|327538933|gb|EGF25571.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica WH47]
Length = 485
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 209/460 (45%), Gaps = 76/460 (16%)
Query: 48 SVMAPQQSERRPATTGSVKNAMTLTEKIFSRA-SEKPQLSPGDNVWVNVDILMTHDVCGP 106
S AP Q+ +TGS TL +KI+ + P+ P + +D+ + H+V P
Sbjct: 5 SSTAPSQAGATSQSTGS----RTLLDKIWDQHLVHAPESGP---AIIYIDLHLVHEVTSP 57
Query: 107 GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNVDILRDFCMEQNI 159
+F + N V E+ + PDH + TSD + + ++ LR+ C E +
Sbjct: 58 QAFEGLRIN---NRPVRRPERTIATPDHNVPTSDRSLPIADPISRKQIETLRENCKEFGV 114
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
+ F DI D+ +G+ H+ + G+ +PG ++ DSHT T GAFG A GIG
Sbjct: 115 QLF-DIDDV--------RQGIVHVIGPENGYTQPGMTIVCGDSHTATHGAFGSLAFGIGT 165
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
++ VL T +L P T +DGE+ + AKD+IL +IG+I AG T +EF G
Sbjct: 166 SEVEHVLATQTLLQFKPKTFELRVDGELARGVTAKDMILYLIGQIGTAGGTGYVLEFTGD 225
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSD 330
V L+MEERMT+CNM +EAG + G++ D TTF YL + P ++ + SD
Sbjct: 226 AVRNLTMEERMTVCNMSIEAGARAGMIAPDQTTFDYLRGRPECPADFDAAVEAWKKLPSD 285
Query: 331 EKASFLSEYRFDISKLEPLVAKPHSP----------------------DNRALARECKDV 368
A++ + S + P V +P + A A + D+
Sbjct: 286 PGATYDRSNLYKGSDIRPQVTWGTNPGQVCSVDSVVPSPGDSTDVNVQKSTASALQYMDL 345
Query: 369 K---------IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
K I+RV+IGSCT + ED AAA V KV +VP + KV +
Sbjct: 346 KAGTPITEIEINRVFIGSCTNARIEDLRAAAAVIKGHHCSDKVNAMIVPGSGKVKLQAEE 405
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ +IF +AG D + C CL D A
Sbjct: 406 --------EGLHKIFTDAGFDWREA-GCSMCLAMNPDKLA 436
>gi|414169581|ref|ZP_11425314.1| 3-isopropylmalate dehydratase large subunit [Afipia clevelandensis
ATCC 49720]
gi|410885313|gb|EKS33128.1| 3-isopropylmalate dehydratase large subunit [Afipia clevelandensis
ATCC 49720]
Length = 470
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 205/443 (46%), Gaps = 92/443 (20%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI++ Q P + +D + H+V P +F + KV +K
Sbjct: 4 ATTLYDKIWNDHLVDEQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRTS---GRKVRAPKK 58
Query: 128 IVIIPDHYIFTSDERANRNVD--------ILRDFCMEQNIKYF--YDIKDLGNFKANPDY 177
+ + DH + T+D R+ N D L + E ++YF YD +
Sbjct: 59 TLAVVDHNVPTTD-RSKPNPDPESAEQIATLAENAREFGVEYFNEYDKR----------- 106
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
+G+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K
Sbjct: 107 QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAK 166
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
+R +DG++PD + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +
Sbjct: 167 NMRATVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRSLSMEGRMTVCNMSI 226
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKL 346
E G + G++ D +++L+ + P ++ + +DE A F E R D +KL
Sbjct: 227 EGGARAGLIAPDEKAYEFLKGRPMAPTGAAWDSGMRYWDTLRTDEGAHFDHEIRLDAAKL 286
Query: 347 EPLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYI 375
P+V SP++ RALA + D+K+DR++I
Sbjct: 287 PPIVTWGTSPEDVISITGVVPDPEKIADEAKRLSKERALAYMGLKAGTKITDIKLDRIFI 346
Query: 376 GSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GK 428
GSCT G+ ED AAAKV A V +V + VPGSG +
Sbjct: 347 GSCTNGRIEDLRAAAKVV---------------AGHHVNANVNAMIVPGSGLVKEQAEAE 391
Query: 429 TCSQIFEEAGCDTPASPSCGACL 451
+IF +AG + P C CL
Sbjct: 392 GLDKIFIKAGFEW-REPGCSMCL 413
>gi|170739152|ref|YP_001767807.1| isopropylmalate isomerase large subunit [Methylobacterium sp. 4-46]
gi|168193426|gb|ACA15373.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium sp.
4-46]
Length = 470
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 200/439 (45%), Gaps = 86/439 (19%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI+ Q P + +D + H+V P +F + +V EK +
Sbjct: 5 TLYDKIWDDHVVDRQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRLA---GRRVHHPEKTL 59
Query: 130 IIPDHYIFTSDE-------RANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCH 182
+ DH + TSD + ++ L E I+Y YD D +G+ H
Sbjct: 60 AVVDHNVQTSDRSLGIEDPESRTQIEALAANVREFGIEY-YDALD--------RRQGIVH 110
Query: 183 IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFV 242
I ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++ K +R
Sbjct: 111 IIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLVQKKAKNMRVT 170
Query: 243 LDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 302
+DG +P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM VE G +
Sbjct: 171 VDGRLPAGVTAKDIILAIIGEIGTAGGTGHVLEYAGEAIRSLSMEGRMTICNMSVEGGAR 230
Query: 303 NGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVA 351
G+V D TTF Y++D+ P +E + SDE A F E R D + L P+V
Sbjct: 231 AGMVAPDETTFAYVKDRPKAPKGAAFDRARAYWESLASDEGAFFDREVRLDAANLPPIVT 290
Query: 352 KPHSPDN------------------------RALA-------RECKDVKIDRVYIGSCTG 380
SP++ +ALA + ++ +D+V+IGSCT
Sbjct: 291 WGTSPEDVVSVQGRVPDPAAIADETIRRSKEQALAYMGLAPGQRITEIGLDKVFIGSCTN 350
Query: 381 GKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQI 433
G+ ED A+ + G+KV P V + VPGSG + ++I
Sbjct: 351 GRIEDLRVVAR--MVEGRKVH------PG-------VSAMVVPGSGLVKQQAEQEGIARI 395
Query: 434 FEEAGCDTPASPSCGACLG 452
EAG D P C CLG
Sbjct: 396 LIEAGFDW-REPGCSMCLG 413
>gi|386399580|ref|ZP_10084358.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
WSM1253]
gi|385740206|gb|EIG60402.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
WSM1253]
Length = 468
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 189/421 (44%), Gaps = 84/421 (19%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV EK + + DH + T+D + +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTDRTKPNPDPESIEQI 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E I+Y+ + +GV H+ ++G PG ++ DSHT T
Sbjct: 86 KALADNAREFGIEYYDEFDK---------RQGVVHVIGPEQGFTLPGTTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI A
Sbjct: 137 GAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +E G + G+V D F +L + P
Sbjct: 197 GGTGYVLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLRGRPKAPKGAD 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 257 WDAAMRYWERLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGSVPDPDKIADEA 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + D+K+DR++IGSCT G+ ED AAAK+ A GK+V
Sbjct: 317 KRLSKHRALKYMGLTAGTKITDIKLDRIFIGSCTNGRIEDLRAAAKI--AEGKQVA---- 370
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTY 458
V + VPGSG + +IF AG + P C CL D
Sbjct: 371 ---------GGVNAMVVPGSGLVKEQAEAEGLDKIFINAGFEW-REPGCSMCLAMNPDKL 420
Query: 459 A 459
A
Sbjct: 421 A 421
>gi|188584065|ref|YP_001927510.1| isopropylmalate isomerase large subunit [Methylobacterium populi
BJ001]
gi|226735979|sp|B1ZKX6.1|LEUC_METPB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|179347563|gb|ACB82975.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium
populi BJ001]
Length = 469
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 200/443 (45%), Gaps = 94/443 (21%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI+ + P + + +D + H+V P +F + KV K +
Sbjct: 6 TLYDKIWD--DHVVDVGPDGSALLYIDRHLVHEVTSPQAFEGLRVA---GRKVHAPHKTL 60
Query: 130 IIPDHYIFTSDE-------RANRNVDIL----RDFCMEQNIKYFYDIKDLGNFKANPDYK 178
+ DH + TSD + ++ L RDF +E FYD D +
Sbjct: 61 AVVDHNVQTSDRSKGIEDPESRTQLEALAENVRDFGIE-----FYDALDR--------RQ 107
Query: 179 GVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPT 238
G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++ +
Sbjct: 108 GIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQRKAKN 167
Query: 239 LRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVE 298
+R +DG +P + AKD++L IIGEI AG T +E+ G + LSME RMT+CNM +E
Sbjct: 168 MRVTVDGTLPPGVSAKDIVLAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTICNMSIE 227
Query: 299 AGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLE 347
G + G+V D T+ Y++D+ P +E + SDE A F E R D + L
Sbjct: 228 GGARAGMVAPDEITYAYVKDRPKAPKGAAFDAARRYWESLVSDEGAQFDREIRLDAANLP 287
Query: 348 PLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYIG 376
PLV+ SP++ +ALA D+ +DRV+IG
Sbjct: 288 PLVSWGTSPEDIVSILGTVPDPAQIADENKRQSKEKALAYMGLTPGMRMTDITLDRVFIG 347
Query: 377 SCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKT 429
SCT G+ ED AK + G+KV V + VPGSG +
Sbjct: 348 SCTNGRIEDLRIVAK--MVEGRKVH-------------DGVSAMVVPGSGLVKAQAEAEG 392
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
+I ++AG D P C CLG
Sbjct: 393 IDRILKDAGFDW-REPGCSMCLG 414
>gi|338972638|ref|ZP_08628010.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobiaceae
bacterium SG-6C]
gi|338234187|gb|EGP09305.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobiaceae
bacterium SG-6C]
Length = 470
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 205/443 (46%), Gaps = 92/443 (20%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI++ Q P + +D + H+V P +F + KV +K
Sbjct: 4 ATTLYDKIWNDHLVDEQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRTS---GRKVRAPKK 58
Query: 128 IVIIPDHYIFTSDERANRNVD--------ILRDFCMEQNIKYF--YDIKDLGNFKANPDY 177
+ + DH + T+D R+ N D L + E ++YF YD +
Sbjct: 59 TLAVVDHNVPTTD-RSKPNPDPESAEQIATLAENAREFGVEYFNEYDKR----------- 106
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
+G+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K
Sbjct: 107 QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAK 166
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
+R +DG++PD + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +
Sbjct: 167 NMRATVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRSLSMEGRMTVCNMSI 226
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKL 346
E G + G++ D +++L+ + P ++ + +DE A F E R D +KL
Sbjct: 227 EGGARAGLIAPDEKAYEFLKGRPMAPTGAAWDAGIRYWDTLRTDEGAHFDHEIRLDAAKL 286
Query: 347 EPLVAKPHSPDN------------------------RALA-------RECKDVKIDRVYI 375
P+V SP++ RALA + D+K+DR++I
Sbjct: 287 PPIVTWGTSPEDVISITGVVPDPEKIADEAKRLSKERALAYMGLKAGTKITDIKLDRIFI 346
Query: 376 GSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GK 428
GSCT G+ ED AAAKV A V +V + VPGSG +
Sbjct: 347 GSCTNGRIEDLRAAAKVV---------------AGHHVNANVNAMIVPGSGLVKEQAEAE 391
Query: 429 TCSQIFEEAGCDTPASPSCGACL 451
+IF +AG + P C CL
Sbjct: 392 GLDKIFIKAGFEW-REPGCSMCL 413
>gi|192288671|ref|YP_001989276.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
TIE-1]
gi|226735996|sp|B3Q851.1|LEUC_RHOPT RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|192282420|gb|ACE98800.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris TIE-1]
Length = 469
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 194/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 30 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 82
Query: 155 MEQNIKYFYDIKDLGNFKANP--DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G N +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 83 AEQIAALAENARDFGITYYNEFDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGQLPDGVTAKDVILAIIGEIGTAGGTGY 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D +++L+ + P
Sbjct: 203 VLEYAGDAIRSLSMEGRMTVCNMSIEGGARAGLIAPDAKAYEFLKGRPLAPKGEAWDAAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
+E + SD+ A F E + D + L P+V SP++
Sbjct: 263 RYWETLRSDDGAHFDHELKLDAAALPPIVTWGTSPEDVISVTGRVPNPADIADEAKRLSK 322
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 323 ERALAYMGLTPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------- 372
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF +AG + P C CL D A
Sbjct: 373 -----NVNAIIVPGSGLVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 422
>gi|32477636|ref|NP_870630.1| isopropylmalate isomerase large subunit [Rhodopirellula baltica SH
1]
gi|32448190|emb|CAD77707.1| 3-isopropylmalate dehydratase large subunit [Rhodopirellula baltica
SH 1]
Length = 511
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 216/478 (45%), Gaps = 78/478 (16%)
Query: 30 SQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFSRA-SEKPQLSPG 88
SQFS ++S S AP Q+ +TGS TL +KI+ + P+ P
Sbjct: 15 SQFSPPTLVSRSMSD--ASSTAPSQAGATSQSTGS----RTLLDKIWDQHLVHAPESGP- 67
Query: 89 DNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER------ 142
+ +D+ + H+V P +F + N V E+ + PDH + TSD
Sbjct: 68 --AIIYIDLHLVHEVTSPQAFEGLRIN---NRPVRRPERTIATPDHNVPTSDRSLPIADP 122
Query: 143 -ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTD 201
+ + ++ LR+ C E ++ F DI D+ +G+ H+ + G+ +PG ++ D
Sbjct: 123 ISRKQIETLRENCKEFGVQLF-DIDDV--------RQGIVHVIGPENGYTQPGMTIVCGD 173
Query: 202 SHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQII 261
SHT T GAFG A GIG ++ VL T +L P T +DGE+ + AKD+IL +I
Sbjct: 174 SHTATHGAFGSLAFGIGTSEVEHVLATQTLLQFKPKTFELRVDGELARGVTAKDMILYLI 233
Query: 262 GEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTS 321
G+I AG T +EF G V L+MEERMT+CNM +EAG + G++ D TTF YL +
Sbjct: 234 GQIGTAGGTGYVLEFTGDAVRNLTMEERMTVCNMSIEAGARAGMIAPDQTTFDYLRGRPE 293
Query: 322 LP---------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP---------------- 356
P ++ + SD A++ + S + P V +P
Sbjct: 294 CPADFDAAVEAWKKLPSDPGATYDRSNLYKGSDIRPQVTWGTNPGQVCSVDSVVPSPGDS 353
Query: 357 ------DNRALARECKDVK---------IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK 401
+ A A + D+K I+RV+IGSCT + ED AAA V K
Sbjct: 354 TDVNVQKSTASALQYMDLKAGTPITEIEINRVFIGSCTNARIEDLRAAAAVIKGHHCSDK 413
Query: 402 VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V +VP + KV + + ++F +AG D + C CL D A
Sbjct: 414 VNAMIVPGSGKVKLQAEE--------EGLHKVFTDAGFDWREA-GCSMCLAMNPDKLA 462
>gi|312116045|ref|YP_004013641.1| 3-isopropylmalate dehydratase large subunit [Rhodomicrobium
vannielii ATCC 17100]
gi|311221174|gb|ADP72542.1| 3-isopropylmalate dehydratase, large subunit [Rhodomicrobium
vannielii ATCC 17100]
Length = 468
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 202/440 (45%), Gaps = 86/440 (19%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI+ + Q + G ++ + +D + H+V P +F + +V +K
Sbjct: 2 AKTLYDKIWDDHVVETQ-ADGTSL-LYIDRHLVHEVTSPQAFEGLRTA---GRRVRAPQK 56
Query: 128 IVIIPDHYIFTSDE-------RANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
+ + DH + T+D A V L + C E I+Y+ ++ +GV
Sbjct: 57 TLAVVDHNVPTTDRSHGIDDPEAALQVQTLGENCAEFGIEYYNELDK---------RQGV 107
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
HI ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K +R
Sbjct: 108 VHIVGPEQGFTLPGTTIVCGDSHTSTHGAFGSLAHGIGTSEVEHVLATQTLIQKKAKNMR 167
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
+DG +PD + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +EAG
Sbjct: 168 VTVDGILPDGVTAKDIILAIIGEIGTAGGTGYVIEYAGEAIRALSMEGRMTVCNMSIEAG 227
Query: 301 GKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPL 349
+ G+V D TF Y+ + P +E + SDE A F E + D + L P+
Sbjct: 228 ARAGLVAPDEKTFAYIAGRPRAPKGAAWELARKYWETLPSDEGAHFDREVKLDAAALPPI 287
Query: 350 VAKPHSPDN------------------------RALAR-------ECKDVKIDRVYIGSC 378
V SP++ RALA + D+ IDRV+IGSC
Sbjct: 288 VTWGTSPEDVVAITGTVPDPAKVADDGKRAAVSRALAYMGLEPGVKMTDIAIDRVFIGSC 347
Query: 379 TGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCS 431
T G+ ED AAA + G++V V + VPGSG +
Sbjct: 348 TNGRIEDLRAAAAIV--EGRRVA-------------ETVNAMVVPGSGLVKEQAEAEGLD 392
Query: 432 QIFEEAGCDTPASPSCGACL 451
+IF AG + P C CL
Sbjct: 393 EIFLAAGFEW-REPGCSMCL 411
>gi|15966959|ref|NP_387312.1| isopropylmalate isomerase large subunit [Sinorhizobium meliloti
1021]
gi|334317904|ref|YP_004550523.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
AK83]
gi|384531028|ref|YP_005715116.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
BL225C]
gi|384537744|ref|YP_005721829.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
SM11]
gi|407722215|ref|YP_006841877.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
Rm41]
gi|418401452|ref|ZP_12974980.1| isopropylmalate isomerase large subunit [Sinorhizobium meliloti
CCNWSX0020]
gi|433614978|ref|YP_007191776.1| bifunctional 3-isopropylmalate dehydratase large subunit
[Sinorhizobium meliloti GR4]
gi|22095848|sp|Q92L76.1|LEUC_RHIME RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|15076232|emb|CAC47785.1| Probable 3-isopropylmalate dehydratase large subunit [Sinorhizobium
meliloti 1021]
gi|333813204|gb|AEG05873.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
BL225C]
gi|334096898|gb|AEG54909.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
AK83]
gi|336034636|gb|AEH80568.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
SM11]
gi|359504560|gb|EHK77094.1| isopropylmalate isomerase large subunit [Sinorhizobium meliloti
CCNWSX0020]
gi|407320447|emb|CCM69051.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium meliloti
Rm41]
gi|429553168|gb|AGA08177.1| bifunctional 3-isopropylmalate dehydratase large subunit
[Sinorhizobium meliloti GR4]
Length = 469
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 192/408 (47%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALARNAADFGVEYYSENDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF+Y++DK P
Sbjct: 203 VIEFAGEAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFEYIKDKPRAPKGEAWDRAV 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ +++DE A + D + L P+V+ SP++
Sbjct: 263 EYWKTLHTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDDIQDETKRTSK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ IDRV+IGSCT G+ ED A A+V G+KV PT
Sbjct: 323 WRALDYMGLKPGTKITDIAIDRVFIGSCTNGRIEDLRAVAEVV--EGRKV-APT------ 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+EAG D P C CL
Sbjct: 374 ------VSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCL 414
>gi|456351952|dbj|BAM86397.1| isopropylmalate isomerase large subunit [Agromonas oligotrophica
S58]
Length = 468
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 193/417 (46%), Gaps = 76/417 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R+ N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F ++ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKALAENAKEF-GVEYYNEFDRR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D F +L + P
Sbjct: 201 YVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLRGRPKAPQGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWETLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGMVPDPDQIADEAKRIS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVS-------- 370
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 -----GHVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|118594733|ref|ZP_01552080.1| isopropylmalate isomerase large subunit [Methylophilales bacterium
HTCC2181]
gi|118440511|gb|EAV47138.1| isopropylmalate isomerase large subunit [Methylophilales bacterium
HTCC2181]
Length = 466
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 203/449 (45%), Gaps = 86/449 (19%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL EKIF+R + D + +D + H+V P +F + N +W
Sbjct: 2 ATTLYEKIFNRHVVRED---NDTYLIYIDRHLIHEVTSPQAFEGLRLA---NRPIWRANS 55
Query: 128 IVIIPDHYIFTSDER-------ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
I+ +PDH + T+D + + V+ L + C D L FK + + +G+
Sbjct: 56 ILAVPDHNVPTTDRKKGILDPISKIQVETLDNNC---------DAYKLTQFKMDDERQGI 106
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++++ T++
Sbjct: 107 VHVIGPEQGSTLPGMTIVCGDSHTSTHGAFGALAMGIGTSEVEHVLATQCLIVRKFKTMQ 166
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
++G + ++ AKD+ L IIG+I AG T ++EF G+ + LSME RMTLCNM +EAG
Sbjct: 167 INVNGVVGKHITAKDVALHIIGQIGTAGGTGYAIEFSGSAIRGLSMEGRMTLCNMAIEAG 226
Query: 301 GKNGVVPADGTTFKYLEDKTSLPYEPVY-----------SDEKASFLSEYRFDISKLEPL 349
+ G+V D T YL+D+ P E ++ SDE A+F + S +EP
Sbjct: 227 SRAGLVGVDSKTISYLKDRPFSPKEELWEQAVESWKELISDEGAAFDKVINMEASSIEPQ 286
Query: 350 VAKPHSPD------------------------NRAL-------ARECKDVKIDRVYIGSC 378
V SP+ RAL + D+ +D+++IGSC
Sbjct: 287 VTWGTSPEMVCGINENIPCPEAEKKESNQKGYQRALDYMGLKESMPITDITLDKIFIGSC 346
Query: 379 TGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCS 431
T + ED AAA+V A + LV VPGSG +
Sbjct: 347 TNSRIEDLRAAAQVVKAKKIAKNIKLALV--------------VPGSGLVKAQAEKEGLD 392
Query: 432 QIFEEAGCDTPASPSCGACLGGPKDTYAR 460
+IF +AG + P C CL D R
Sbjct: 393 KIFIDAGFEW-RDPGCSMCLAMNADRLER 420
>gi|338741493|ref|YP_004678455.1| 3-isopropylmalate dehydratase large subunit [Hyphomicrobium sp.
MC1]
gi|337762056|emb|CCB67891.1| 3-isopropylmalate dehydratase (isomerase), large subunit
[Hyphomicrobium sp. MC1]
Length = 468
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 198/441 (44%), Gaps = 85/441 (19%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KIF + SP + +D + H+V P +F + KV EK
Sbjct: 2 AKTLYDKIFD--DHVVEQSPDGTSLLYIDRHLVHEVTSPQAFEGLRMA---GRKVRAPEK 56
Query: 128 IVIIPDHYIFTSD-------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
+ + DH + T+D E++ V+ L + I+YF + +G+
Sbjct: 57 TLAVVDHNVPTTDRSKGIADEQSRVQVETLATNARDFGIEYFNE---------RDKRQGI 107
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K +R
Sbjct: 108 VHVVGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMR 167
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
+DG P + AKD+ L IIGEI AG T +E+ G + LSME RMT+CNM +E G
Sbjct: 168 VTVDGVAPKGVGAKDITLAIIGEIGTAGGTGSVIEYAGEAIRALSMEGRMTVCNMSIEGG 227
Query: 301 GKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPL 349
+ G++ D TF +L+D+ P +E + +D+ A F E R D +KL P+
Sbjct: 228 ARAGMIAPDEKTFAFLKDRPKAPKGMAWDMAMKYWETLRTDDGAHFDREVRLDAAKLPPI 287
Query: 350 VAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSC 378
V+ SP++ RAL D+ +D V+IGSC
Sbjct: 288 VSWGTSPEDVTSIASAVPNPADVHDENKRASMQRALEYMGLTPGTRMTDIPLDVVWIGSC 347
Query: 379 TGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCS 431
T G+ ED A AK+ GKK+ Y + VPGSG +
Sbjct: 348 TNGRIEDLRAVAKIV--DGKKISSRL------------AYAMIVPGSGLVKEQAEAEGLD 393
Query: 432 QIFEEAGCDTPASPSCGACLG 452
+IF +AG + P C CLG
Sbjct: 394 KIFLDAGFEW-REPGCSMCLG 413
>gi|440718150|ref|ZP_20898614.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica SWK14]
gi|39931383|sp|Q7UIA7.2|LEUC_RHOBA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|436436692|gb|ELP30412.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
baltica SWK14]
Length = 485
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 209/460 (45%), Gaps = 76/460 (16%)
Query: 48 SVMAPQQSERRPATTGSVKNAMTLTEKIFSRA-SEKPQLSPGDNVWVNVDILMTHDVCGP 106
S AP Q+ +TGS TL +KI+ + P+ P + +D+ + H+V P
Sbjct: 5 SSTAPSQAGATSQSTGS----RTLLDKIWDQHLVHAPESGP---AIIYIDLHLVHEVTSP 57
Query: 107 GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNVDILRDFCMEQNI 159
+F + N V E+ + PDH + TSD + + ++ LR+ C E +
Sbjct: 58 QAFEGLRIN---NRPVRRPERTIATPDHNVPTSDRSLPIADPISRKQIETLRENCKEFGV 114
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
+ F DI D+ +G+ H+ + G+ +PG ++ DSHT T GAFG A GIG
Sbjct: 115 QLF-DIDDV--------RQGIVHVIGPENGYTQPGMTIVCGDSHTATHGAFGSLAFGIGT 165
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
++ VL T +L P T +DGE+ + AKD+IL +IG+I AG T +EF G
Sbjct: 166 SEVEHVLATQTLLQFKPKTFELRVDGELARGVTAKDMILYLIGQIGTAGGTGYVLEFTGD 225
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSD 330
V L+MEERMT+CNM +EAG + G++ D TTF YL + P ++ + SD
Sbjct: 226 AVRNLTMEERMTVCNMSIEAGARAGMIAPDQTTFDYLRGRPECPADFDAAVEAWKKLPSD 285
Query: 331 EKASFLSEYRFDISKLEPLVAKPHSP----------------------DNRALARECKDV 368
A++ + S + P V +P + A A + D+
Sbjct: 286 PGATYDRSNLYKGSDIRPQVTWGTNPGQVCSVDSVVPSPGDSTDVNVQKSTASALQYMDL 345
Query: 369 K---------IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
K I+RV+IGSCT + ED AAA V KV +VP + KV +
Sbjct: 346 KAGTPITEIEINRVFIGSCTNARIEDLRAAAAVIKGHHCSDKVNAMIVPGSGKVKLQAEE 405
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ ++F +AG D + C CL D A
Sbjct: 406 --------EGLHKVFTDAGFDWREA-GCSMCLAMNPDKLA 436
>gi|406661224|ref|ZP_11069347.1| 3-isopropylmalate dehydratase large subunit [Cecembia lonarensis
LW9]
gi|405555011|gb|EKB50077.1| 3-isopropylmalate dehydratase large subunit [Cecembia lonarensis
LW9]
Length = 466
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 190/405 (46%), Gaps = 69/405 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNV 147
+D H+V P +F +K V E+ + PDH + T D+ + V
Sbjct: 28 IDKHFIHEVTSPVAFLNLEKR---GIGVLYPERTIATPDHNVPTVDQEKTIKDKLSRMQV 84
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
+ LRD C KY ++ DLG+ + G+ H+ + G +PG ++ DSHT T
Sbjct: 85 EKLRDNCK----KYGIELHDLGS-----AHHGIVHVIGPELGVTQPGMTIVCGDSHTSTH 135
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ P +R +DGE+ + +KD+IL II +IS A
Sbjct: 136 GAFGAIAFGIGTSEVEMVLATQCIMQSKPKRMRITVDGELGKGVTSKDIILYIIAKISAA 195
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
GAT +E+ G+ + LSME RMT+CNM +E G + GV+ D TTF YL+ K P
Sbjct: 196 GATGYFVEYAGSAIRNLSMEARMTICNMSIEMGARGGVIAPDETTFNYLKGKQYAPKGEA 255
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP------------------DN 358
++ + +DE A F EY F+ S +EP++ +P N
Sbjct: 256 WDKAVAYWKTLQTDEGAEFDKEYHFEGSDIEPMITYGTNPGMGIKVIDSIPTTEGMEGSN 315
Query: 359 RALARECKDV------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL 406
+A + D K+D V++GSCT G+ ED A A K + ++
Sbjct: 316 KASFMKSLDYMGFAPGEPIKGKKVDYVFVGSCTNGRIEDIRAVANFVKGKHKADNITAWI 375
Query: 407 VPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
VP +++V + + +I EEAG + P C ACL
Sbjct: 376 VPGSREVEKLAHE--------EGLVKILEEAGFEL-RQPGCSACL 411
>gi|319935153|ref|ZP_08009592.1| aconitate hydratase [Coprobacillus sp. 29_1]
gi|319809803|gb|EFW06191.1| aconitate hydratase [Coprobacillus sp. 29_1]
Length = 639
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 171/342 (50%), Gaps = 19/342 (5%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M L KI S ++ +L PG+ + + +D +T D G+ + E E V +K
Sbjct: 1 MNLAYKILSSHLKEGKLVPGEQICIQIDQTLTQD--STGTMAYLQLEAMEVGHVA-VDKA 57
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V DH + + + + +R + I + GN GVCH L E
Sbjct: 58 VAYIDHNMLQTGFENMDDHEFIRSVAKKHGITF----SKPGN--------GVCH-QLQLE 104
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+PGE L+G+DSHT T GA G A G G D + TGK L+ P ++ L G+
Sbjct: 105 NFSKPGETLVGSDSHTPTCGAMGMIAIGAGGLDVAVAMATGKYYLQCPSVIQVNLTGQKA 164
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
++ AKD+IL+++ E+SV G K +E+ G + LS+ +R T+CNM E G V P
Sbjct: 165 PWVSAKDIILKVLQELSVKGGVNKIVEYTGEGIATLSLTDRATICNMGAELGATTSVFPT 224
Query: 309 DGTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
D T +YL+ + Y + +D A++ D+S LEP+VAKPHSPD ARE +
Sbjct: 225 DKRTLEYLKQQGRENDYVEMKADADATYDQVLEIDMSTLEPMVAKPHSPDAVVPARELEG 284
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
+ I++V IGSCT D + AAK+ G+KV LV A
Sbjct: 285 MAINQVVIGSCTNSSFADMMRAAKIL--KGRKVAEHVSLVIA 324
>gi|449135486|ref|ZP_21770944.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
europaea 6C]
gi|448885873|gb|EMB16286.1| 3-isopropylmalate dehydratase, large subunit [Rhodopirellula
europaea 6C]
Length = 485
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 209/460 (45%), Gaps = 76/460 (16%)
Query: 48 SVMAPQQSERRPATTGSVKNAMTLTEKIFSRA-SEKPQLSPGDNVWVNVDILMTHDVCGP 106
S AP Q+ +TGS TL +KI+ + P+ P + +D+ + H+V P
Sbjct: 5 SSTAPSQAGATSQSTGS----RTLLDKIWDQHLVHAPESGP---AIIYIDLHLVHEVTSP 57
Query: 107 GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNVDILRDFCMEQNI 159
+F + N V E+ + PDH + TSD + + ++ LR+ C E +
Sbjct: 58 QAFEGLRIN---NRPVRRPERTIATPDHNVPTSDRSLPIADPISRKQIETLRENCKEFGV 114
Query: 160 KYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGN 219
+ F DI D+ +G+ H+ + G+ +PG ++ DSHT T GAFG A GIG
Sbjct: 115 QLF-DIDDV--------RQGIVHVIGPENGYTQPGMTIVCGDSHTATHGAFGSLAFGIGT 165
Query: 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGT 279
++ VL T +L P T +DGE+ + AKD+IL +IG+I AG T +EF G
Sbjct: 166 SEVEHVLATQTLLQFKPKTFELRVDGELARGVTAKDMILYLIGQIGTAGGTGYVLEFTGD 225
Query: 280 TVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSD 330
V L+MEERMT+CNM +EAG + G++ D TTF YL + P ++ + SD
Sbjct: 226 AVRNLTMEERMTVCNMSIEAGARAGMIAPDQTTFDYLRGRPECPADFDAAVEAWKKLPSD 285
Query: 331 EKASFLSEYRFDISKLEPLVAKPHSP----------------------DNRALARECKDV 368
A++ + S + P V +P + A A + D+
Sbjct: 286 PGAAYDRSNVYKGSDIRPQVTWGTNPGQVCSVDSVVPSPGDSTDVNVQKSTASALQYMDL 345
Query: 369 K---------IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYT 419
K I+RV+IGSCT + ED AAA V KV +VP + +V +
Sbjct: 346 KAGTPITEIEINRVFIGSCTNARIEDLRAAAAVIKGHHCSEKVNAMIVPGSGRVKLQAEE 405
Query: 420 LPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+ +IF +AG D + C CL D A
Sbjct: 406 --------EGLHKIFTDAGFDWREA-GCSMCLAMNPDKLA 436
>gi|365890617|ref|ZP_09429126.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. STM 3809]
gi|365333524|emb|CCE01657.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. STM 3809]
Length = 468
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 193/417 (46%), Gaps = 76/417 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R+ N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTD-RSKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F I+ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKALAENAKEF-GIEYYNEFDRR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 201 YVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDDKAYDFLRGRPKAPQGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWETLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISITGVVPDPDKIADEAKRIS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVS-------- 370
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 -----GHVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|153008282|ref|YP_001369497.1| isopropylmalate isomerase large subunit [Ochrobactrum anthropi ATCC
49188]
gi|404316619|ref|ZP_10964552.1| isopropylmalate isomerase large subunit [Ochrobactrum anthropi
CTS-325]
gi|166989645|sp|A6WXG4.1|LEUC_OCHA4 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|151560170|gb|ABS13668.1| 3-isopropylmalate dehydratase, large subunit [Ochrobactrum anthropi
ATCC 49188]
Length = 469
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 192/414 (46%), Gaps = 85/414 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANR--------N 146
+D + H+V P +F + KV EK + + DH + TS +R N
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRHPEKTLAVVDHNVPTSPDRINGIKNEESRIQ 85
Query: 147 VDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
V+ L + N++Y+ + +GV HI ++G PG ++ DSHT T
Sbjct: 86 VEALAKNAADFNVEYYSE---------RDRRQGVVHIVGPEQGFTLPGMTIVCGDSHTST 136
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG A GIG ++ VL T ++ K + ++GE+ + AKD+ L IIGEI
Sbjct: 137 HGAFGSLAHGIGTSEVEHVLATQTLIQKKAKNMLVRVEGELAPGVTAKDITLAIIGEIGT 196
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--- 323
AG T +E+ G+ + LSME RMT+CNM +E G + G++ D TTF Y++DK P
Sbjct: 197 AGGTGYVIEYAGSAIRSLSMEGRMTVCNMSIEGGARAGLIAPDETTFAYVQDKPRAPKGE 256
Query: 324 --------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------- 358
++ ++SDE A F D +K+ P+V+ SP++
Sbjct: 257 ALEQAISYWKTLHSDEGAHFDKIVELDAAKISPVVSWGSSPEDVVFVTDIVPNPDEIKDE 316
Query: 359 -------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
RAL + D+KIDRV+IGSCT G+ ED AA+ +A+GKKV
Sbjct: 317 TKRASKWRALDYMGLKPGTKMTDIKIDRVFIGSCTNGRIEDLRDAAR--MAAGKKVAA-- 372
Query: 405 FLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF EAG D P C CL
Sbjct: 373 -----------GVNAMIVPGSGLVKEQAEAEGLDKIFIEAGFDW-REPGCSMCL 414
>gi|448408429|ref|ZP_21574224.1| aconitate hydratase [Halosimplex carlsbadense 2-9-1]
gi|445674284|gb|ELZ26828.1| aconitate hydratase [Halosimplex carlsbadense 2-9-1]
Length = 658
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 185/405 (45%), Gaps = 64/405 (15%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L PG+ + + +D ++T D G VW
Sbjct: 2 GQTLTEKILDDHLVEGELEPGEEIGIEIDQVLTQDTTG--------------TLVW---- 43
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD--------LGNFKANPDY-- 177
F + + N ++ +C Q ++ + D G F A+
Sbjct: 44 -------LQFDALDLDNVQTEVAAQYCDHQTYQFDFKNTDDHRFLRSAAGKFGAHFSRPG 96
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
G+CH + +E PG+ +LG+DSHT T G G+ A G G D +G G + +P
Sbjct: 97 NGICH-NVHKENFAAPGKTMLGSDSHTPTPGGMGELAIGAGGLDVAVAMGGGAYYIDMPE 155
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
+ L+GE+P++ AKD+IL+++ +SV G K E+ G VE LS+ ER T+ NM
Sbjct: 156 VVNVRLEGELPEWATAKDVILELLRRLSVKGGVGKIFEYTGPGVESLSVPERTTITNMGT 215
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP--YEPVYSDEKASFLSEYRFDISKLEPLVAKPHS 355
E G + + P D T +YL D P YE V DE A + E D+S LEPL+A+P
Sbjct: 216 ELGATSSIFPTDEKTEEYL-DAVGRPEDYEAVAPDEDAEYHDEIVVDLSDLEPLIAEPSM 274
Query: 356 PDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWM 415
PD RE + +D+V IGSCT G ED L AAK+ +++ T ++ A
Sbjct: 275 PDKVVPVREVEGTDVDQVMIGSCTNGAYEDILPAAKML--EDREINKTTEMIVA------ 326
Query: 416 DVYTLPVPGSGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
PGS K S++ G + +CGAC+G
Sbjct: 327 -------PGS--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|300024872|ref|YP_003757483.1| 3-isopropylmalate dehydratase, large subunit [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526693|gb|ADJ25162.1| 3-isopropylmalate dehydratase, large subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 468
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 202/442 (45%), Gaps = 87/442 (19%)
Query: 68 AMTLTEKIFS-RASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
A TL +KIF EK S + +D + H+V P +F + KV E
Sbjct: 2 AKTLYDKIFDDHVVEK---SEDGTCLLYIDRHLVHEVTSPQAFEGLRMT---GRKVRAPE 55
Query: 127 KIVIIPDHYIFTSD-------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKG 179
K + + DH + T+D E++ V+ L + I+Y+ ++ +G
Sbjct: 56 KTLAVVDHNVPTTDRTKGIADEQSRVQVETLATNARDFGIEYYNELDK---------RQG 106
Query: 180 VCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTL 239
+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K +
Sbjct: 107 IVHVVGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNM 166
Query: 240 RFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEA 299
R V+DG P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E
Sbjct: 167 RVVVDGVAPHGVGAKDIILAIIGEIGTAGGTGSVIEYAGDAIRALSMEGRMTVCNMSIEG 226
Query: 300 GGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEP 348
G + G++ D TF +++D+ P +E + SD+ A F E R D +KL P
Sbjct: 227 GARAGMIAPDEKTFAFIKDRPKAPKGMAWDMAMKYWETLGSDDGAHFDREIRLDAAKLPP 286
Query: 349 LVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGS 377
+V+ SP++ RAL + D+ +D V+IGS
Sbjct: 287 IVSWGTSPEDVTAITSVVPNPADVVDENKRASMQRALDYMGLAPGTKITDIPLDVVWIGS 346
Query: 378 CTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTC 430
CT G+ ED A AK+ GKK+ Y + VPGSG +
Sbjct: 347 CTNGRIEDLRAVAKIV--DGKKISSRL------------AYAMIVPGSGLVKEQAEAEGL 392
Query: 431 SQIFEEAGCDTPASPSCGACLG 452
+IF+ AG + P C CLG
Sbjct: 393 DKIFKAAGFEW-REPGCSMCLG 413
>gi|146337520|ref|YP_001202568.1| isopropylmalate isomerase large subunit [Bradyrhizobium sp. ORS
278]
gi|146190326|emb|CAL74322.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. ORS 278]
Length = 468
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 191/416 (45%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 81
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
+EQ + KD G + +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 82 IEQIKTLAENAKDFGIEYYNEFDRRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 141
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 142 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTGY 201
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 202 VLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDEKAYDFLRGRPKAPQGAAWDAAM 261
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 262 RYWETLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGMVPDPDKIADEAKRISK 321
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 322 HRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVS--------- 370
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 ----SHVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|90421751|ref|YP_530121.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
BisB18]
gi|122477669|sp|Q21CT4.1|LEUC_RHOPB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|90103765|gb|ABD85802.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris BisB18]
Length = 473
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 191/422 (45%), Gaps = 86/422 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD------ 148
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 34 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPDPESADQ 89
Query: 149 --ILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
L + E + Y+ + +GV H+ ++G PG ++ DSHT T
Sbjct: 90 IAALAENAREFGVTYYNEFDK---------RQGVVHVIGPEQGFTLPGTTIVCGDSHTST 140
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG A GIG ++ VL T ++ K +R +DG +PD + AKD+IL IIGEI
Sbjct: 141 HGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGALPDGVTAKDIILAIIGEIGT 200
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--- 323
AG T +E+ G+ + LSME RMT+CNM +E G + G++ D + YL+ + P
Sbjct: 201 AGGTGYVLEYAGSAIRALSMEGRMTVCNMSIEGGARAGLIAPDEKAYAYLKGRPMAPTGA 260
Query: 324 --------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------- 358
+E + SDE A F E R D + L P+V SP++
Sbjct: 261 NWDAAMRYWETLRSDEGAHFDHELRLDAAALPPIVTWGTSPEDVISILGSVPNPADIADE 320
Query: 359 -------RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
RALA + D+KIDR +IGSCT G+ ED AAAKV A GK V
Sbjct: 321 AKRLSKERALAYMGLTAGTKITDIKIDRAFIGSCTNGRIEDLRAAAKV--AEGKTVN--- 375
Query: 405 FLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDT 457
+V + VPGSG + +IF AG + P C CL D
Sbjct: 376 ----------GNVNAIIVPGSGLVKEQAEAEGLDKIFIAAGFEW-REPGCSMCLAMNPDK 424
Query: 458 YA 459
A
Sbjct: 425 LA 426
>gi|291086908|ref|ZP_06571717.1| homoaconitate hydratase [Clostridium sp. M62/1]
gi|291077365|gb|EFE14729.1| putative 3-isopropylmalate dehydratase large subunit [Clostridium
sp. M62/1]
Length = 278
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 15/234 (6%)
Query: 222 AGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTV 281
AG V TGK KVP ++FVL G+ ++ KD+IL IIG I V GA YKSMEF G +
Sbjct: 3 AGMV--TGKAWFKVPSAIKFVLTGKPGKWVSGKDVILHIIGMIGVDGALYKSMEFTGDGI 60
Query: 282 ERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRF 341
LSM++R T+CNM +EAGGKNG+ P D +Y+++ + ++ +DE A + + Y
Sbjct: 61 RNLSMDDRFTICNMAIEAGGKNGIFPVDEKAVQYMKEHSKREFQIHEADEDAEYEAVYTI 120
Query: 342 DISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK 401
D+S L+P VA PH P+N E DV ID+V IGSCT G+ ED AA++ G+KVK
Sbjct: 121 DLSALKPTVAFPHLPENTKTIDEAGDVAIDQVVIGSCTNGRLEDMRIAAEIL--KGRKVK 178
Query: 402 --VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGG 453
V ++PATQ +++ + + F EAG ++P+CG CLGG
Sbjct: 179 KGVRCIVIPATQAIYLQCIK--------EGLMETFIEAGA-VVSTPTCGPCLGG 223
>gi|390959269|ref|YP_006423026.1| 3-isopropylmalate dehydratase large subunit [Terriglobus roseus DSM
18391]
gi|390414187|gb|AFL89691.1| 3-isopropylmalate dehydratase, large subunit [Terriglobus roseus
DSM 18391]
Length = 488
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 203/440 (46%), Gaps = 86/440 (19%)
Query: 70 TLTEKIFSR------ASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVW 123
TL EK++ + A E P L +D+ + H+V P +F + G +
Sbjct: 6 TLFEKVWQQHLVAEPAGEPPLLY--------IDLQLVHEVTSPQAFEGLRLA-GRKLRRP 56
Query: 124 DREKIVIIPDHYIFTS---------DERANRNVDILRDFCMEQNIKYFYDIKDLGNFKAN 174
DR + DH + T+ D+ A++ V LR+ C E I++F D++D
Sbjct: 57 DRHIATV--DHNVPTTSVQDRLHIVDQIASKQVQALRNNCAEFGIEFF-DVQDAS----- 108
Query: 175 PDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLK 234
+G+ H+ + G +PG ++ DSHT T GAFG A GIG ++ V+ T +
Sbjct: 109 ---QGIVHMIGPELGATKPGMTIVCGDSHTSTHGAFGAMAFGIGTSEVEHVMATQTLPQP 165
Query: 235 VPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCN 294
P T R ++GE+P + AKD+IL IIG I GAT ++E+ G+ + LSME RMT+CN
Sbjct: 166 KPKTFRINVEGELPFGVTAKDIILDIIGRIGTDGATGYAVEYAGSAIRALSMEGRMTVCN 225
Query: 295 MVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDI 343
M +EAG + G++ D TTF YL+ + P ++ + +DE A+F E D
Sbjct: 226 MSIEAGARAGMIAPDETTFAYLKGRRFSPQGTAWDEAVAHWQTLPTDEGATFDREMHIDA 285
Query: 344 SKLEPLVAKPHSP--------------------DNRALARECK-----------DVKIDR 372
+ L P V SP D ++ A+ + +KID
Sbjct: 286 ATLAPAVTWGTSPGMHATIDGNVPTLDEAPSEADKKSFAKAYEYMDLKPGMPMDQIKIDT 345
Query: 373 VYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQ 432
V++GSCT G+ ED AAA V K+ +VP +Q V + +
Sbjct: 346 VFLGSCTNGRIEDLRAAAAVVKGHHIATKIRAMVVPGSQAVKRQAE--------AEGLDE 397
Query: 433 IFEEAGCDTPASPSCGACLG 452
IF+ AG + P C CLG
Sbjct: 398 IFKTAGFEW-REPGCSMCLG 416
>gi|335433509|ref|ZP_08558330.1| aconitate hydratase [Halorhabdus tiamatea SARL4B]
gi|334898627|gb|EGM36730.1| aconitate hydratase [Halorhabdus tiamatea SARL4B]
Length = 656
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 188/392 (47%), Gaps = 42/392 (10%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI +L+PG+ + + +D +T D G + F+ E A+ E
Sbjct: 4 TLTEKILDDHLVDGELTPGEEIGIEIDQALTQDTTGTLVWLQFEALELEEAQT---ELAA 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
DH + D +N D R F KY G + + P G+CH + +E
Sbjct: 61 QYCDHQTYQFD---FKNTDDHR-FLRSAAGKY-------GAYFSRPG-NGICH-QVHKEH 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+GE+P+
Sbjct: 108 FAKPGKTMLGSDSHTPTPGGLGELAIGAGGLDLAVAMGGGAYYIEMPEIVNVRLEGELPE 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ AKD+IL+++ ++V G K +EF G VE L++ ER T+ NM E G + P D
Sbjct: 168 WATAKDVILELLRRLTVKGGVGKVLEFSGPGVESLTVPERTTITNMGTELGATTSIFPTD 227
Query: 310 GTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
G T YLE Y + DE A + + D+S LEPL+A P PDN RE
Sbjct: 228 GETKDYLERLGRGEDYVEIGPDEDAEYADQIVVDLSDLEPLIATPSMPDNIVPVREVAGE 287
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+++V IGSCT G ED L AAK+ G+++ T ++ A PGS K
Sbjct: 288 DVEQVIIGSCTNGAYEDILPAAKML--EGREIDPTTEMIVA-------------PGS--K 330
Query: 429 TCSQIFEEAGCDTP--------ASPSCGACLG 452
S++ G + + +CGAC+G
Sbjct: 331 QASEMLAREGWASEMMAAGVNFSESTCGACIG 362
>gi|418053561|ref|ZP_12691617.1| 3-isopropylmalate dehydratase large subunit [Hyphomicrobium
denitrificans 1NES1]
gi|353211186|gb|EHB76586.1| 3-isopropylmalate dehydratase large subunit [Hyphomicrobium
denitrificans 1NES1]
Length = 468
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 201/441 (45%), Gaps = 85/441 (19%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KIF + S + +D + H+V P +F + KV EK
Sbjct: 2 AKTLYDKIFD--DHVVEQSEDGTCLLYIDRHLIHEVTSPQAFEGLRMA---GRKVRAPEK 56
Query: 128 IVIIPDHYIFTSD-------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGV 180
+ + DH + T+D E++ V+ L + I+Y+ ++ +G+
Sbjct: 57 TLAVVDHNVPTTDRRKGIADEQSRVQVETLAANARDFGIEYYNELDK---------RQGI 107
Query: 181 CHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLR 240
H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K +R
Sbjct: 108 VHVVGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMR 167
Query: 241 FVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 300
+DG P + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E G
Sbjct: 168 VTVDGVAPRGVGAKDIILAIIGEIGTAGGTGSVIEYAGDAIRALSMEGRMTVCNMSIEGG 227
Query: 301 GKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPL 349
+ G++ D TF +++D+ P +E ++SD+ A F E R D +KL P+
Sbjct: 228 ARAGMIAPDEKTFAFIKDRPKAPKGMAWDMAMKYWETLHSDDGAHFDLEVRLDAAKLPPI 287
Query: 350 VAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSC 378
V+ SP++ RAL + D+ +D V+IGSC
Sbjct: 288 VSWGTSPEDVTSITGAVPNPADVHDENKRASMQRALDYMGLAPGTKMTDIPLDVVWIGSC 347
Query: 379 TGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCS 431
T G+ ED A AKV GKK+ Y + VPGSG +
Sbjct: 348 TNGRIEDLRAVAKVV--DGKKISSRL------------AYAMIVPGSGLVKEQAEAEGLD 393
Query: 432 QIFEEAGCDTPASPSCGACLG 452
+IF+ AG + P C CLG
Sbjct: 394 KIFKAAGFEW-REPGCSMCLG 413
>gi|430005489|emb|CCF21290.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) [Rhizobium
sp.]
Length = 468
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 191/408 (46%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+ +R++ I +
Sbjct: 28 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTT---PDRHIGIKNEES 81
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 82 RIQVEALAQNAHDFGVEYYSEKDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 141
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P+ + AKD+IL IIGEI AG T
Sbjct: 142 LAHGIGTSEVEHVLATQTLVQKKAKNMLVRVDGKLPEGVTAKDIILAIIGEIGTAGGTGH 201
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF Y++DK P
Sbjct: 202 VIEFAGEAIRSLSMEGRMTICNMTIEGGARAGLIAPDETTFAYIKDKPRAPKGAAWDMAL 261
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ +++DE A F D + L P+V+ SP++
Sbjct: 262 EYWKTLHTDEGAHFDKVVVLDAANLPPIVSWGSSPEDVISVQGVVPNPDDIKDETKRASK 321
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ IDRV+IGSCT G+ ED AAAKV G+ V PT
Sbjct: 322 WRALDYMGLKPGTKITDIAIDRVFIGSCTNGRIEDLRAAAKVL--EGRHV-APT------ 372
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+EAG + P C CL
Sbjct: 373 ------VSAMVVPGSGLVKEQAEAEGLDKIFKEAGFEW-REPGCSMCL 413
>gi|13473614|ref|NP_105182.1| isopropylmalate isomerase large subunit [Mesorhizobium loti
MAFF303099]
gi|22095850|sp|Q98EF1.1|LEUC_RHILO RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|14024364|dbj|BAB50968.1| 3-isopropylmalate dehydratase [Mesorhizobium loti MAFF303099]
Length = 469
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 186/401 (46%), Gaps = 59/401 (14%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS ER I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRLS---GRKVRHPEKTLAVVDHNVSTSPER---KFGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + KD G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALAKNAKDFGVEYYSENDIRQGIVHIIGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ + + +DG++P+ + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQRKAKNMLVRVDGQLPEGVTAKDIILAIIGEIGTAGGTGY 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ AD TTF Y++DK P
Sbjct: 203 VIEYAGEAIRSLSMEGRMTICNMSIEGGARAGLIAADETTFAYVKDKPRAPKGAAWDAAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SDE A F D +KL P+V+ SP++
Sbjct: 263 AYWKTLQSDEGAHFDKVIVLDAAKLPPIVSWGSSPEDVVSVQGVVPNPEEITDENKRTSK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ +DRV+IGSCT G+ ED AAAKV +V +VP +
Sbjct: 323 IRALDYMGLTPGTKITDIALDRVFIGSCTNGRIEDLRAAAKVIEGKTVNPRVNAMIVPGS 382
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
L + + +IF AG D P C CL
Sbjct: 383 --------GLVKEQAEAEGLDKIFLAAGFDW-REPGCSMCL 414
>gi|365878876|ref|ZP_09418328.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. ORS 375]
gi|365293193|emb|CCD90859.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. ORS 375]
Length = 468
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 191/416 (45%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 81
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
+EQ + KD G + +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 82 IEQIKTLAENAKDFGIEYYNEFDRRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 141
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 142 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTGY 201
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 202 VLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDEKAYDFLRGRPKAPQGAAWDAAM 261
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 262 RYWETLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISITGVVPDPDKITDEAKRISK 321
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 322 HRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVS--------- 370
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 ----GHVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|332797746|ref|YP_004459246.1| 3-isopropylmalate dehydratase [Acidianus hospitalis W1]
gi|332695481|gb|AEE94948.1| 3-isopropylmalate dehydratase [Acidianus hospitalis W1]
Length = 415
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 187/386 (48%), Gaps = 30/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TLTEKI SRAS K ++SPGD + DI+ HD+ G + +K E KV+D+ KIV
Sbjct: 4 TLTEKILSRASGK-EVSPGDVIEAKTDIVAFHDLTGYHVIEVMEKAGIE--KVFDKSKIV 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I DH D R+ ++R F + + F+DI NF G+ H L E
Sbjct: 61 IAFDHLAPPPDIRSAEIQVMIRKFVKKMGLPNFHDI----NF-------GIMHEVLL-EK 108
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V++ DSHT T+GA G FA G+G +D TGK L VP + L G
Sbjct: 109 YALPGQVIVAADSHTTTSGAVGAFAQGMGASDIAAATITGKTWLVVPTPFKVELKGSPGK 168
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L+++ E S+E M+ R T+ NM +E + D
Sbjct: 169 WITGKDVALKLLQEFKADYFNGMSIEVYVENPSAFPMDYRATVSNMGIEMNADALMFIPD 228
Query: 310 GTTFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD 367
T Y+ KT YEP V D A + EY ++ KLEPLVA P+S DN E +
Sbjct: 229 EETKNYI--KTMRGYEPALVTPDPGAKYTDEYTIELGKLEPLVAAPYSVDNVKTVNEVEG 286
Query: 368 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGG 427
++D+V+IGSCT G+ D AAK+ KKVK +PA+ +++ L
Sbjct: 287 KEVDQVFIGSCTNGRLSDIEIAAKIL--KDKKVKTRCIAIPASYEMFKRAMDL------- 337
Query: 428 KTCSQIFEEAGCDTPASPSCGACLGG 453
+ AGC +CG CLGG
Sbjct: 338 -GYIETLVNAGCIVTYG-TCGPCLGG 361
>gi|85714459|ref|ZP_01045447.1| 3-isopropylmalate dehydratase, large subunit region [Nitrobacter
sp. Nb-311A]
gi|85698906|gb|EAQ36775.1| 3-isopropylmalate dehydratase, large subunit region [Nitrobacter
sp. Nb-311A]
Length = 468
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 193/408 (47%), Gaps = 74/408 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 29 IDRHLVHEVTSPQAFEGLRVA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 81
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G + +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 82 AEQIAALAQNARDFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 141
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R V++G++PD + AKD+IL IIGEI AG T
Sbjct: 142 LAHGIGTSEVEHVLATQTLIQKKAKNMRAVVNGKLPDGVTAKDIILAIIGEIGTAGGTGY 201
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D T +++L+ + P
Sbjct: 202 VLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLIAPDETAYEFLKGRPKAPKGAGWDAAM 261
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
+E + SDE A F E R D + L P+V SP++
Sbjct: 262 RYWENLRSDEGAHFDHEIRLDAAMLPPIVTWGTSPEDVIAVTGKVPDPADIEDEAKRLSK 321
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A G+ V
Sbjct: 322 ERALHYMGLSPGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--ADGRTVN--------- 370
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
+V + VPGSG + +IF +AG + P C CL
Sbjct: 371 ----GNVNAMVVPGSGLVKEQAEAEGIDKIFIKAGFEW-REPGCSMCL 413
>gi|219852732|ref|YP_002467164.1| 3-isopropylmalate dehydratase [Methanosphaerula palustris E1-9c]
gi|219546991|gb|ACL17441.1| 3-isopropylmalate dehydratase [Methanosphaerula palustris E1-9c]
Length = 406
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 183/384 (47%), Gaps = 34/384 (8%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL E+I A+ G + +D HD G G + E E++
Sbjct: 3 TLAERILGGAA-------GTYLDRKIDTAYAHD--GTGVLTLQAWEEMGGGIPAHPERLQ 53
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
I+ DH + ++ LR F I++ D G +G+CH LA EG
Sbjct: 54 ILFDHIVPANNSTTATLQQKLRAFSKGAGIRF----SDCG--------EGICHQVLA-EG 100
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
PG V++G DSHTCT GAFG FATG+G TD + +G + LKVP T+R L G +
Sbjct: 101 GIIPGNVVIGADSHTCTLGAFGAFATGVGATDMAAIWASGCIWLKVPETIRVDLQGRLTG 160
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
KDL L+ + + + GATYK++EF G + M+ R+T+ N+ VE G K G+ AD
Sbjct: 161 AAEPKDLALRYVSLLGMGGATYKALEFTGEGAATIPMDGRLTMANLAVETGAKAGLFYAD 220
Query: 310 GTTFKYLEDKTSLPYEPVYS-DEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T +YL + + E+ +L D++ +EPLVA PH D + +
Sbjct: 221 QETRRYLAASGKDVDDAITQVPEEGKYLETLAIDLADIEPLVAVPHRVDTVRPVADVAGL 280
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGK 428
+D+V++G+CT G+ D A + GKKV V T +VPA+QKV ++ + V
Sbjct: 281 HLDQVFLGTCTNGRYPDLARFAAIV--KGKKVVVRTVIVPASQKVLIEAASTGVLAD--- 335
Query: 429 TCSQIFEEAGCDTPASPSCGACLG 452
AGC P CG CLG
Sbjct: 336 -----LIGAGC-MVGPPGCGPCLG 353
>gi|240141212|ref|YP_002965692.1| 3-isopropylmalate isomerase subunit [Methylobacterium extorquens
AM1]
gi|240011189|gb|ACS42415.1| 3-isopropylmalate isomerase, subunit with LeuD [Methylobacterium
extorquens AM1]
Length = 469
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 201/448 (44%), Gaps = 104/448 (23%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL +KI+ + P + + +D + H+V P +F E +V R
Sbjct: 6 TLYDKIWD--DHVVDVEPDGSALLYIDRHLVHEVTSPQAF--------EGLRVAGRTVRA 55
Query: 126 -EKIVIIPDHYIFTSDE-------RANRNVDIL----RDFCMEQNIKYFYDIKDLGNFKA 173
K + + DH + TSD + ++ L RDF +E FYD D
Sbjct: 56 PHKTLAVVDHNVQTSDRSKGIEDPESRTQLEALAENVRDFGIE-----FYDALD------ 104
Query: 174 NPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLL 233
+G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++
Sbjct: 105 --QRQGIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQ 162
Query: 234 KVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLC 293
+ +R +DG +P + AKD++L IIGEI AG T +E+ G + LSME RMT+C
Sbjct: 163 RKAKNMRVTVDGTLPRGVSAKDIVLAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTIC 222
Query: 294 NMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFD 342
NM +E G + G+V D TT+ Y++ + P +E + +DE A F E R D
Sbjct: 223 NMSIEGGARAGMVAPDETTYAYVKGRPKAPKGAAFDAARRYWESLATDEGAHFDREIRLD 282
Query: 343 ISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKID 371
+ L PLV+ SP++ +ALA DV +D
Sbjct: 283 AANLPPLVSWGTSPEDIVSILGTVPDPAQIADENKRQSKEKALAYMGLTPGTRMTDVTLD 342
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG----- 426
RV+IGSCT G+ ED AK + G+KV V + VPGSG
Sbjct: 343 RVFIGSCTNGRIEDLRIVAK--MVEGRKVH-------------DSVSAMVVPGSGLVKAQ 387
Query: 427 --GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +I ++AG D P C CLG
Sbjct: 388 AEAEGIDRILKDAGFDW-REPGCSMCLG 414
>gi|367467654|ref|ZP_09467577.1| 3-isopropylmalate dehydratase large subunit [Patulibacter sp. I11]
gi|365817278|gb|EHN12253.1| 3-isopropylmalate dehydratase large subunit [Patulibacter sp. I11]
Length = 473
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 207/435 (47%), Gaps = 79/435 (18%)
Query: 71 LTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVI 130
+ + +F + E +++ G + +D+ M H+V P +F + V +K +
Sbjct: 1 MPKTLFDKIWEAHEVAEG---LIYIDLHMVHEVTSPQAFDGLRLA---GRPVRRPDKTLA 54
Query: 131 IPDHYIFTS---------DERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVC 181
DH + T D + V+ L C E + F LG+ + +G+
Sbjct: 55 TADHNVPTDGTPVAARIKDALSRTQVETLERNCAEFGVPVF----SLGS-----NRQGIV 105
Query: 182 HIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRF 241
H+ ++G +PG ++ DSHT T GAFG A GIG ++ VL T ++ K P ++R
Sbjct: 106 HVVGPEQGMTQPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLVQKKPKSMRI 165
Query: 242 VLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGG 301
+GE+P + AKD+IL IG++ V GA +EF G VE+LSME RMT+CNM +E GG
Sbjct: 166 RFEGELPYGVTAKDMILGAIGQMGVDGAVGYVVEFAGPAVEQLSMEGRMTICNMTIEGGG 225
Query: 302 KNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLV 350
+ G++ D TTF Y++ K + P ++ +Y+DE A F E D+++L P V
Sbjct: 226 RAGMIAPDQTTFDYVQGKPAAPKGEAWDAAVEQWKQLYTDEGAVFDKEIVVDVTQLSPRV 285
Query: 351 A----------------KPHSPDN--------RAL-------ARECKDVKIDRVYIGSCT 379
P S D+ RAL +++KIDRV++GSCT
Sbjct: 286 TWGTTPGMVVGVDGTVPTPDSFDDVAQREQAQRALEYMGLEGGERIEEIKIDRVFLGSCT 345
Query: 380 GGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEA 437
G+ D AAA V G+KV V +VP + +V + L + ++F +A
Sbjct: 346 NGRLADLQAAADVI--QGRKVADHVYAMVVPGSVQVKIAAEQLGL--------DKVFTDA 395
Query: 438 GCDTPASPSCGACLG 452
G D + C CLG
Sbjct: 396 GFDWRGA-GCSMCLG 409
>gi|410030971|ref|ZP_11280801.1| isopropylmalate isomerase large subunit [Marinilabilia sp. AK2]
Length = 466
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 190/405 (46%), Gaps = 69/405 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER-------ANRNV 147
+D H+V P +F +K V E+ + PDH + T D+ + V
Sbjct: 28 IDKHFIHEVTSPVAFLNLEKR---GIGVLYPERTIATPDHNVPTVDQEKTIKDKLSRMQV 84
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
+ LRD C KY ++ DLG+ + G+ H+ + G +PG ++ DSHT T
Sbjct: 85 EKLRDNCK----KYGIELHDLGS-----AHHGIVHVIGPELGVTQPGMTIVCGDSHTSTH 135
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ P +R +DGE+ + +KD+IL II +IS A
Sbjct: 136 GAFGAIAFGIGTSEVEMVLATQCIMQSKPKRMRITVDGELGKGVTSKDIILYIIAKISAA 195
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
GAT +E+ G+ + LSME RMT+CNM +E G + G++ D TTF YL+ K P
Sbjct: 196 GATGYFVEYAGSAIRNLSMEARMTICNMSIEMGARGGLIAPDETTFNYLKGKQYAPKGEA 255
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP------------------DN 358
++ + +DE A F EY F+ S +EP++ +P N
Sbjct: 256 WDKAVAYWKTLQTDEGAEFDKEYHFEGSDIEPMITYGTNPGMGIKVIDSIPTTEGMEGSN 315
Query: 359 RALARECKDV------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL 406
+A + D K+D V++GSCT G+ ED A A K + ++
Sbjct: 316 KASFMKSLDYMGFAPGEPIKGKKVDYVFVGSCTNGRIEDIRAVANFVKGKHKADNITAWI 375
Query: 407 VPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
VP +++V + + +I EEAG + P C ACL
Sbjct: 376 VPGSREVEKLAHE--------EGLVKILEEAGFEL-RQPGCSACL 411
>gi|384214178|ref|YP_005605341.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobium
japonicum USDA 6]
gi|354953074|dbj|BAL05753.1| 3-isopropylmalate dehydratase large subunit [Bradyrhizobium
japonicum USDA 6]
Length = 483
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 190/409 (46%), Gaps = 76/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R N D I +
Sbjct: 44 IDRHLVHEVTSPQAFEGLR---ATGRKVHSPEKTLAVVDHNVPTTD-RTKPNPDPESIEQ 99
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F I+ F +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 100 IKALAENAKEF-GIEYYDEFDKR---QGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 155
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++P+ + KD+IL IIGEI AG T
Sbjct: 156 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPEGVTGKDIILAIIGEIGTAGGTG 215
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D F +L + P
Sbjct: 216 YVLEYAGDAISALSMEGRMTVCNMSIEGGARAGLVAPDQKAFDFLRGRPKAPKGADWDAA 275
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SD+ A F E R D +KL P+V SP++
Sbjct: 276 MRYWEKLRSDDGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGIVPDPDQIADEAKRLS 335
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DR++IGSCT G+ ED AAAK+ A GK V
Sbjct: 336 KHRALKYMGLTAGTKITDIKVDRIFIGSCTNGRIEDLRAAAKI--AEGKTVSA------- 386
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF +AG + P C CL
Sbjct: 387 ------HVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 428
>gi|367474163|ref|ZP_09473687.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. ORS 285]
gi|365273555|emb|CCD86155.1| 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate
isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2)
[Bradyrhizobium sp. ORS 285]
Length = 468
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 192/417 (46%), Gaps = 76/417 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLR---ATGRKVHAPEKTLAVVDHNVPTTD-RTKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N K F ++ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKALAENAKEF-GVEYYNEFDRR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 201 YVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDEKAYDFLRGRPKAPQGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SDE A F E R D +KL P+V SP++
Sbjct: 261 MRYWETLRSDEGAHFDHELRLDAAKLPPIVTWGTSPEDVISVTGLVPDPDKITDEAKRIS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVS-------- 370
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
V + VPGSG + +IF +AG + P C CL D A
Sbjct: 371 -----GHVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|390449704|ref|ZP_10235307.1| isopropylmalate isomerase large subunit [Nitratireductor
aquibiodomus RA22]
gi|389663660|gb|EIM75179.1| isopropylmalate isomerase large subunit [Nitratireductor
aquibiodomus RA22]
Length = 537
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 200/441 (45%), Gaps = 87/441 (19%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KIF Q + +D + H+V P +F + + V EK
Sbjct: 4 ARTLYDKIFDDHLVDQQ--DDGTCLLYIDRHLVHEVTSPQAFEGLRMA---SRNVRHPEK 58
Query: 128 IVIIPDHYIFTSDER--------ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKG 179
+ + DH + TS +R + VD L + I+Y+ AN + +G
Sbjct: 59 TLAVVDHNVPTSPDRKFGIKNPESRIQVDALAKNAADFGIEYY---------DANDERQG 109
Query: 180 VCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTL 239
+ HI ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ + +
Sbjct: 110 IVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQRRAKNM 169
Query: 240 RFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEA 299
+DG +P+ + AKD+IL IIGEI AG T ME+ G + LSME RMT+CNM +E
Sbjct: 170 LIEVDGALPEGVTAKDIILAIIGEIGTAGGTGHVMEYAGEAIRALSMEGRMTVCNMSIEG 229
Query: 300 GGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEP 348
G + G++ D TT+ Y++D+ P ++ + +DE A F + D + L P
Sbjct: 230 GARAGLIAPDETTYAYIKDRPRAPKGKAWDMALAYWDSLRTDEGAEFDRVVKLDAANLPP 289
Query: 349 LVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGS 377
+V SP++ RAL + D+ +DRV+IGS
Sbjct: 290 IVTWGSSPEDVVSVTGVVPNPDEITEETKRLSKKRALEYMGLTPGTKITDIAVDRVFIGS 349
Query: 378 CTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTC 430
CT G+ ED AAKV A G+KVK + + VPGSG +
Sbjct: 350 CTNGRIEDLREAAKV--AEGQKVK-------------DGLNAMIVPGSGLVKAQAEAEGL 394
Query: 431 SQIFEEAGCDTPASPSCGACL 451
+IF+ AG D P C CL
Sbjct: 395 DRIFKAAGFDW-REPGCSMCL 414
>gi|339626966|ref|YP_004718609.1| isopropylmalate isomerase large subunit [Sulfobacillus acidophilus
TPY]
gi|379008653|ref|YP_005258104.1| 3-isopropylmalate dehydratase large subunit [Sulfobacillus
acidophilus DSM 10332]
gi|339284755|gb|AEJ38866.1| isopropylmalate isomerase large subunit [Sulfobacillus acidophilus
TPY]
gi|361054915|gb|AEW06432.1| 3-isopropylmalate dehydratase large subunit [Sulfobacillus
acidophilus DSM 10332]
Length = 475
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 193/420 (45%), Gaps = 74/420 (17%)
Query: 84 QLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDER- 142
Q S + + +D H+V P +F +KE G + DR V + DH + TSD
Sbjct: 18 QGSTAEPTLLYIDRHYVHEVTSPQAFEGLRKE-GRTVRRPDR--TVAVMDHNVPTSDRSL 74
Query: 143 ------ANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEV 196
A R +++L + C E I YD+ +PD +G+ HI + G +PG
Sbjct: 75 PIQDTIAKRQMELLAENCREFGIP-LYDLH-------HPD-QGIVHIIGPELGLTQPGMT 125
Query: 197 LLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDL 256
++ DSHT T GAFG A GIG ++ VL T + + P T+ GE P + AKD+
Sbjct: 126 IVCGDSHTSTHGAFGSLAFGIGTSEVEHVLATQTLWQQKPKTMEVRFIGERPFGVTAKDM 185
Query: 257 ILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYL 316
IL +IG+I+ AGAT +E+ G V+ LSMEERMTLCNM +EAG + G+V D TT YL
Sbjct: 186 ILALIGQITTAGATGYVIEYTGDAVKSLSMEERMTLCNMSIEAGARAGLVSPDETTINYL 245
Query: 317 EDKTSLPYEPVY-----------SDEKASFLSEYRFDISKLEPLVAKPHSP--------- 356
+ P + + SD AS+ D+ +L P+V SP
Sbjct: 246 RGRRFAPADDQFDAKAAEWLALASDPGASYDRVVEVDLRRLAPMVTWGTSPGMVSPITAT 305
Query: 357 ----------DNRALAREC------------KDVKIDRVYIGSCTGGKTEDFLAAAKVFL 394
D R R + IDRV+IGSCT G+ ED AA V
Sbjct: 306 VPNPDEADDADTREAIRYALQYMDLQPGTPLSAIAIDRVFIGSCTNGRLEDLKRAAHVI- 364
Query: 395 ASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLG 452
GKKV V +VP + +V L + +IF EAG + P C CLG
Sbjct: 365 -QGKKVAPGVRAMVVPGSGQVKRQAEALGL--------DRIFTEAGFEW-REPGCSMCLG 414
>gi|227823655|ref|YP_002827628.1| isopropylmalate isomerase large subunit [Sinorhizobium fredii
NGR234]
gi|254809043|sp|C3M9V0.1|LEUC_RHISN RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|227342657|gb|ACP26875.1| 3-isopropylmalate dehydratase, large subunit [Sinorhizobium fredii
NGR234]
Length = 469
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 189/408 (46%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALARNAADFGVEYYSENDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF Y++DK P
Sbjct: 203 VIEFAGEAIRSLSMEGRMTICNMTIEGGARAGLIAPDETTFDYIKDKPRAPKGKAWDMAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ +++DE A + D + L P+V+ SP++
Sbjct: 263 DYWKTLHTDEGAHYDRIVVLDAADLPPIVSWGSSPEDVISVQGAVPNPDDIQEETKRASK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ +DRV+IGSCT G+ ED A AKV G+KV
Sbjct: 323 WRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAVAKVV--EGRKVAST------- 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+EAG D P C CL
Sbjct: 374 ------VSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCL 414
>gi|343085058|ref|YP_004774353.1| 3-isopropylmalate dehydratase large subunit [Cyclobacterium marinum
DSM 745]
gi|342353592|gb|AEL26122.1| 3-isopropylmalate dehydratase large subunit [Cyclobacterium marinum
DSM 745]
Length = 473
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 69/405 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFT-------SDERANRNV 147
+D H+V P +F +K KV E+ + PDH + T D+ + V
Sbjct: 28 IDKHFIHEVTSPVAFLNLEKR---GNKVMFPERTIATPDHNVPTVDQDKTIKDQLSRMQV 84
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
+ LR+ C + I D+ DLG D+ G+ H+ + G +PG ++ DSHT T
Sbjct: 85 EKLRENCKKHGI----DLHDLGT-----DHHGIVHVIGPELGITQPGMTIVCGDSHTSTH 135
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ V T ++ P +R +DGE+ + +KD+IL II +IS +
Sbjct: 136 GAFGTIAFGIGTSEVEMVFATQCIMQAKPKKMRITIDGELGKGVTSKDIILYIIAQISAS 195
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G+ + LSME RMT+CNM +E G + G++ D TTF+YL+ K P
Sbjct: 196 GGTGYFIEYAGSAIRSLSMEARMTICNMSIEMGARGGLIAPDETTFEYLKGKQYSPKGEE 255
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP-------------------D 357
++ + +DE A+F EY++D + +EP++ +P +
Sbjct: 256 WDKAVAHWKTLQTDEGATFDVEYQYDAADIEPMITYGTNPGMGVKVRGNIPTTDGMNESE 315
Query: 358 NRALAREC-----------KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFL 406
N++ + + KID V++GSCT G+ ED + A+ K + ++
Sbjct: 316 NKSYIKSLDYMGFQPGEAMEGKKIDYVFVGSCTNGRIEDLRSVAQFVKGKKKADNITAWI 375
Query: 407 VPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
VP +++V + Q EEAG P C ACL
Sbjct: 376 VPGSREVEKKAIE--------EGIVQTLEEAGFKL-RQPGCSACL 411
>gi|218532643|ref|YP_002423459.1| isopropylmalate isomerase large subunit [Methylobacterium
extorquens CM4]
gi|254563725|ref|YP_003070820.1| 3-isopropylmalate isomerase subunit with LeuD [Methylobacterium
extorquens DM4]
gi|254809039|sp|B7KRK4.1|LEUC_METC4 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|218524946|gb|ACK85531.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium
extorquens CM4]
gi|254271003|emb|CAX27009.1| 3-isopropylmalate isomerase, subunit with LeuD [Methylobacterium
extorquens DM4]
Length = 469
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 200/448 (44%), Gaps = 104/448 (23%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL +KI+ + P + + +D + H+V P +F E +V R
Sbjct: 6 TLYDKIWD--DHVVDVEPDGSALLYIDRHLVHEVTSPQAF--------EGLRVAGRTVRA 55
Query: 126 -EKIVIIPDHYIFTSDE-------RANRNVDIL----RDFCMEQNIKYFYDIKDLGNFKA 173
K + + DH + TSD + ++ L RDF +E FYD D
Sbjct: 56 PHKTLAVVDHNVQTSDRSKGIEDPESRTQLEALAENVRDFGIE-----FYDALD------ 104
Query: 174 NPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLL 233
+G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++
Sbjct: 105 --QRQGIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQ 162
Query: 234 KVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLC 293
+ +R +DG +P + AKD++L IIGEI AG T +E+ G + LSME RMT+C
Sbjct: 163 RKAKNMRVTVDGTLPRGVSAKDIVLAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTIC 222
Query: 294 NMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFD 342
NM +E G + G+V D TT+ Y+ + P +E + +DE A F E R D
Sbjct: 223 NMSIEGGARAGMVAPDETTYAYVNGRPKAPKGAAFDAARRYWESLATDEGAHFDREIRLD 282
Query: 343 ISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKID 371
+ L PLV+ SP++ +ALA DV +D
Sbjct: 283 AANLPPLVSWGTSPEDIVSILGTVPDPAQIADENKRQSKEKALAYMGLTPGTRMTDVTLD 342
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG----- 426
RV+IGSCT G+ ED AK + G+KV V + VPGSG
Sbjct: 343 RVFIGSCTNGRIEDLRIVAK--MVEGRKVH-------------DSVSAMVVPGSGLVKAQ 387
Query: 427 --GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +I ++AG D P C CLG
Sbjct: 388 AEAEGIDRILKDAGFDW-REPGCSMCLG 414
>gi|418062502|ref|ZP_12700281.1| 3-isopropylmalate dehydratase large subunit [Methylobacterium
extorquens DSM 13060]
gi|373563943|gb|EHP90092.1| 3-isopropylmalate dehydratase large subunit [Methylobacterium
extorquens DSM 13060]
Length = 480
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 201/448 (44%), Gaps = 104/448 (23%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL +KI+ + P + + +D + H+V P +F E +V R
Sbjct: 17 TLYDKIWD--DHVVDVEPDGSALLYIDRHLVHEVTSPQAF--------EGLRVAGRTVRA 66
Query: 126 -EKIVIIPDHYIFTSDE-------RANRNVDIL----RDFCMEQNIKYFYDIKDLGNFKA 173
K + + DH + TSD + ++ L RDF +E FYD D
Sbjct: 67 PHKTLAVVDHNVQTSDRSKGIEDPESRTQLEALAENVRDFGIE-----FYDALD------ 115
Query: 174 NPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLL 233
+G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++
Sbjct: 116 --QRQGIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQ 173
Query: 234 KVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLC 293
+ +R +DG +P + AKD++L IIGEI AG T +E+ G + LSME RMT+C
Sbjct: 174 RKAKNMRVTVDGTLPRGVSAKDIVLAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTIC 233
Query: 294 NMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFD 342
NM +E G + G+V D TT+ Y++ + P +E + +DE A F E R D
Sbjct: 234 NMSIEGGARAGMVAPDETTYAYVKGRPKAPKGAAFDAARRYWESLATDEGAHFDREIRLD 293
Query: 343 ISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKID 371
+ L PLV+ SP++ +ALA DV +D
Sbjct: 294 AANLPPLVSWGTSPEDIVSILGTVPDPAQIADENKRQSKEKALAYMGLTPGTRMTDVTLD 353
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG----- 426
RV+IGSCT G+ ED AK + G+KV V + VPGSG
Sbjct: 354 RVFIGSCTNGRIEDLRIVAK--MVEGRKVH-------------DSVSAMVVPGSGLVKAQ 398
Query: 427 --GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +I ++AG D P C CLG
Sbjct: 399 AEAEGIDRILKDAGFDW-REPGCSMCLG 425
>gi|355571318|ref|ZP_09042570.1| 3-isopropylmalate dehydratase large subunit [Methanolinea tarda
NOBI-1]
gi|354825706|gb|EHF09928.1| 3-isopropylmalate dehydratase large subunit [Methanolinea tarda
NOBI-1]
Length = 404
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 190/383 (49%), Gaps = 35/383 (9%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL+E+I + G V VD HD G G + + + ++ R++
Sbjct: 3 TLSERILGAPA-------GSYVDCRVDRCYVHD--GTGVLTLEAYQAMQAERIARRDRTY 53
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
++ DH + ++ LR F + + + D+G +G+CH + EG
Sbjct: 54 VLFDHIVPANNSVTAGLQAELRRFARDGGLPF----TDIG--------EGICHQVMG-EG 100
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
P E+++G DSHTCT GAFG FATG+G TD + G +VP T+ L G + +
Sbjct: 101 IVLPDEIVVGADSHTCTLGAFGAFATGVGATDMAAIWADGGTWFRVPETIAIFLSGSLKE 160
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
AKDL L + +S+ GATYK++EFVG V+ LSME RMTL N+ VE G K G+ AD
Sbjct: 161 PAEAKDLALTYVSRLSMDGATYKALEFVGDGVQSLSMESRMTLSNLAVETGAKAGLFYAD 220
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
GTT YL D P DE +S+ DIS + P+VA P D + +
Sbjct: 221 GTTCAYLGDYGH-SVSPQVPDE-SSYPQRLEIDISDIVPVVAVPPRVDTVRPVGDLAGLP 278
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V++G+CT G+ D A++ GKKV+V T + PA+++V S
Sbjct: 279 LDQVFVGTCTNGRYGDLERFARIV--RGKKVRVRTLVAPASRRVLARA-------SATGV 329
Query: 430 CSQIFEEAGCDTPASPSCGACLG 452
S + EAGC T P CG CLG
Sbjct: 330 LSWLI-EAGC-TILPPGCGPCLG 350
>gi|163853752|ref|YP_001641795.1| isopropylmalate isomerase large subunit [Methylobacterium
extorquens PA1]
gi|163665357|gb|ABY32724.1| 3-isopropylmalate dehydratase, large subunit [Methylobacterium
extorquens PA1]
Length = 480
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 200/448 (44%), Gaps = 104/448 (23%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDR---- 125
TL +KI+ + P + + +D + H+V P +F E +V R
Sbjct: 17 TLYDKIWD--DHVVDVEPDGSALLYIDRHLVHEVTSPQAF--------EGLRVAGRTVRA 66
Query: 126 -EKIVIIPDHYIFTSDE-------RANRNVDIL----RDFCMEQNIKYFYDIKDLGNFKA 173
K + + DH + TSD + ++ L RDF +E FYD D
Sbjct: 67 PHKTLAVVDHNVQTSDRSKGIEDPESRTQLEALAENVRDFGIE-----FYDALD------ 115
Query: 174 NPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLL 233
+G+ HI ++G PG+ ++ DSHT T GAFG A GIG ++ VL T ++
Sbjct: 116 --QRQGIVHIIGPEQGFTLPGQTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQ 173
Query: 234 KVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLC 293
+ +R +DG +P + AKD++L IIGEI AG T +E+ G + LSME RMT+C
Sbjct: 174 RKAKNMRVTVDGTLPRGVSAKDIVLAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTIC 233
Query: 294 NMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFD 342
NM +E G + G+V D TT+ Y+ + P +E + +DE A F E R D
Sbjct: 234 NMSIEGGARAGMVAPDETTYAYVNGRPKAPKGAAFDAARRYWESLATDEGAHFDREIRLD 293
Query: 343 ISKLEPLVAKPHSPDN------------------------RALA-------RECKDVKID 371
+ L PLV+ SP++ +ALA DV +D
Sbjct: 294 AANLPPLVSWGTSPEDIVSILGTVPDPAQIADENKRQSKEKALAYMGLTPGTRMTDVTLD 353
Query: 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG----- 426
RV+IGSCT G+ ED AK + G+KV V + VPGSG
Sbjct: 354 RVFIGSCTNGRIEDLRIVAK--MVEGRKVH-------------DSVSAMVVPGSGLVKAQ 398
Query: 427 --GKTCSQIFEEAGCDTPASPSCGACLG 452
+ +I ++AG D P C CLG
Sbjct: 399 AEAEGIDRILKDAGFDW-REPGCSMCLG 425
>gi|39933317|ref|NP_945593.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
CGA009]
gi|81564378|sp|Q6ND69.1|LEUC_RHOPA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|39652942|emb|CAE25684.1| 3-isopropylmalate dehydratase [Rhodopseudomonas palustris CGA009]
Length = 469
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 194/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 30 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 82
Query: 155 MEQNIKYFYDIKDLGNFKANP--DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G N +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 83 AEQIAALAENARDFGITYYNEFDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGQLPDGVTAKDVILAIIGEIGTAGGTGY 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D +++L+ + P
Sbjct: 203 VLEYAGDAIRSLSMEGRMTVCNMSIEGGARAGLIAPDERAYEFLKGRPLAPKGAAWDAAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SD+ A F E + D + L P+V SP++
Sbjct: 263 RYWDTLRSDDGAHFDHELKLDAAALPPIVTWGTSPEDVISVTGRVPNPADIADEAKRLSK 322
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 323 ERALAYMGLTPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------- 372
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF +AG + P C CL D A
Sbjct: 373 -----NVNAIIVPGSGLVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 422
>gi|254472421|ref|ZP_05085821.1| 3-isopropylmalate dehydratase, large subunit [Pseudovibrio sp.
JE062]
gi|211958704|gb|EEA93904.1| 3-isopropylmalate dehydratase, large subunit [Pseudovibrio sp.
JE062]
Length = 468
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 191/413 (46%), Gaps = 84/413 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + +V ++ + + DH + T+D + V
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRQVRHPKRTLAVVDHNVPTTDRSKGIDDPESALQV 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E ++Y+ ++ +GV HI ++G PG ++ DSHT T
Sbjct: 86 QTLADNAAEFGVEYYSELDQ---------RQGVVHIVGPEQGFTLPGMTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K LR ++G++P+ + AKD++L IIGE+ A
Sbjct: 137 GAFGSLAHGIGTSEVEHVLATQTLIQKKAKNLRVTVNGQLPEGVTAKDIVLAIIGELGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +EAG + G++ D T++YL+ + P
Sbjct: 197 GGTGYVIEYAGEAIRGLSMEGRMTVCNMSIEAGARAGLIAPDEKTYEYLKGRPKSPKGAA 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP------------------DN 358
+E +++DE A F E D + L P+V SP DN
Sbjct: 257 WEQAVSYWETLFTDENAEFDKEIVLDAANLPPIVTWGSSPEDVVSVTGVVPNPADIEDDN 316
Query: 359 RALARE-------------CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
R ++E D+K+DRV++GSCT G+ ED AA V GKKV
Sbjct: 317 RRASKERALEYMGVEAGQKITDIKVDRVFVGSCTNGRIEDLREAAAVV--KGKKVADT-- 372
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF++AG + P C CL
Sbjct: 373 -----------VSAMIVPGSGLVKAQAEAEGLDEIFKDAGFEW-REPGCSMCL 413
>gi|115522360|ref|YP_779271.1| isopropylmalate isomerase large subunit [Rhodopseudomonas palustris
BisA53]
gi|122297956|sp|Q07UU3.1|LEUC_RHOP5 RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|115516307|gb|ABJ04291.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris BisA53]
Length = 470
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 192/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 31 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 83
Query: 155 MEQNIKYFYDIKDLGNFKANP--DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + ++ G N +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 84 AEQIAALAENAREFGVTYYNEFDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 143
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++P + AKD+IL IIGEI AG T
Sbjct: 144 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGDLPAGVTAKDIILAIIGEIGTAGGTGY 203
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G+ + LSME RMT+CNM +E G + G++ D + YL+ + P
Sbjct: 204 VLEYAGSAIRALSMEGRMTVCNMSIEGGARAGLIAPDEKAYAYLKGRPLAPKGEAWDAAM 263
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SDE A F E R D + L P+V SP++
Sbjct: 264 RYWQTLRSDEGAHFDHEIRLDAAALPPIVTWGTSPEDVISITGKVPNPADIADEAKRLSK 323
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 324 ERALAYMGLNPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------- 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF AG + P C CL D A
Sbjct: 374 -----NVNAIIVPGSGLVKEQAEAEGLDKIFIAAGFEW-REPGCSMCLAMNPDKLA 423
>gi|316931787|ref|YP_004106769.1| 3-isopropylmalate dehydratase large subunit [Rhodopseudomonas
palustris DX-1]
gi|315599501|gb|ADU42036.1| 3-isopropylmalate dehydratase, large subunit [Rhodopseudomonas
palustris DX-1]
Length = 469
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 194/416 (46%), Gaps = 74/416 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + T+D R+ N D
Sbjct: 30 IDRHLVHEVTSPQAFEGLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PES 82
Query: 155 MEQNIKYFYDIKDLGNFKANP--DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
EQ + +D G N +GV H+ ++G PG ++ DSHT T GAFG
Sbjct: 83 AEQIAALAENARDFGITYYNEFDKRQGVVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K +R +DG++PD + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGQLPDGVTAKDVILAIIGEIGTAGGTGY 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ D +++L+ + P
Sbjct: 203 VLEYAGDAIRSLSMEGRMTVCNMSIEGGARAGLIAPDERAYEFLKGRPLAPKGDAWDAAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SD+ A F E + D + L P+V SP++
Sbjct: 263 RYWDTLRSDDGAHFDHELKLDAAALPPIVTWGTSPEDVISVTGRVPNPADIADEAKRLSK 322
Query: 359 -RALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RALA + D+KIDR++IGSCT G+ ED AAAKV A GK V
Sbjct: 323 ERALAYMGLTPGTKITDIKIDRMFIGSCTNGRIEDLRAAAKV--AEGKTVNA-------- 372
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+V + VPGSG + +IF +AG + P C CL D A
Sbjct: 373 -----NVNAIIVPGSGLVKEQAEAEGLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 422
>gi|374993173|ref|YP_004968672.1| 3-isopropylmalate dehydratase large subunit [Desulfosporosinus
orientis DSM 765]
gi|357211539|gb|AET66157.1| 3-isopropylmalate dehydratase large subunit [Desulfosporosinus
orientis DSM 765]
Length = 408
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 195/386 (50%), Gaps = 46/386 (11%)
Query: 69 MTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128
M E+ + A+ K ++ GD++ V VD+ + HD+ GP + FKK G ++V+D +K+
Sbjct: 1 MNQIERYLAAAAGKDEVHAGDDITVKVDLAIAHDITGPMAVEQFKK-IG-ISQVFDNQKV 58
Query: 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQE 188
V + DH I + A ++LR+F E +K + D G +GV H +A++
Sbjct: 59 VFVLDHIIPAATVEAKVLHNVLREFSREYGVKLY----DKG--------EGVIHQVIAEK 106
Query: 189 GHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMP 248
+ G +L+G DSHTCTAGA+ A +G T+ + TG + L+VP ++G++
Sbjct: 107 HPLKRGSILIGADSHTCTAGAYRVLAIPVGATELAATMATGTLDLEVPEVCEICIEGQLQ 166
Query: 249 DYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPA 308
+ AKD+IL +IG AG T + + + G+ +E L+M+++MT+ NM +E
Sbjct: 167 PGVYAKDVILHLIGYFGTAGFTDQGVIYTGSLMEHLTMDDKMTISNMGIEM--------- 217
Query: 309 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
G+ Y D P +PV + ++ Y F + VA P +P A +
Sbjct: 218 -GSMISYFSD----PAQPVGTVKEV-----YTFQAEDIPASVACPPNPGIVVKAEDLSAT 267
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
KI +V IGSCT G+ D LAAA+V G+KV V ++PA+ + +
Sbjct: 268 KISQVVIGSCTNGRLSDMLAAAEVL--KGRKVAEGVTLLIIPASVDIAQQMED------- 318
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
+ ++IF EAG SP CG C G
Sbjct: 319 -QGLNRIFREAG-GMITSPGCGPCFG 342
>gi|448684699|ref|ZP_21692786.1| aconitate hydratase [Haloarcula japonica DSM 6131]
gi|445782630|gb|EMA33471.1| aconitate hydratase [Haloarcula japonica DSM 6131]
Length = 657
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAEPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEEIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|374328630|ref|YP_005078814.1| isopropylmalate isomerase large subunit [Pseudovibrio sp. FO-BEG1]
gi|359341418|gb|AEV34792.1| isopropylmalate isomerase large subunit [Pseudovibrio sp. FO-BEG1]
Length = 468
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 193/413 (46%), Gaps = 84/413 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + +V ++ + + DH + T+D + V
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRQVRHPKRTLAVVDHNVPTTDRSKGIDDPESALQV 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L D E ++Y+ ++ +GV HI ++G PG ++ DSHT T
Sbjct: 86 QTLADNAAEFGVEYYSELDQ---------RQGVVHIVGPEQGFTLPGMTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ K LR ++G++P+ + AKD++L IIGE+ A
Sbjct: 137 GAFGSLAHGIGTSEVEHVLATQTLIQKKAKNLRVTVNGQLPEGVTAKDIVLAIIGELGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LSME RMT+CNM +EAG + G++ D T++YL+ + P
Sbjct: 197 GGTGYVIEYAGEAIRGLSMEGRMTVCNMSIEAGARAGLIAPDEKTYEYLKGRPKSPKGAA 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E +++DE A F E D + L P+V SP++
Sbjct: 257 WEQAVSYWETLFTDESAEFDKEIVLDAANLPPIVTWGSSPEDVASVTGVVPNPADIEDET 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL ++ D+KIDRV++GSCT G+ ED AA+V GKKV
Sbjct: 317 RRASKERALEYMGVEAGQKITDIKIDRVFVGSCTNGRIEDLREAAEVV--KGKKVADT-- 372
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF++AG + P C CL
Sbjct: 373 -----------VSAMIVPGSGLVKAQAEAEGLDEIFKDAGFEW-REPGCSMCL 413
>gi|448680719|ref|ZP_21691010.1| aconitate hydratase [Haloarcula argentinensis DSM 12282]
gi|445768587|gb|EMA19670.1| aconitate hydratase [Haloarcula argentinensis DSM 12282]
Length = 657
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAEPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVHLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|336391826|ref|ZP_08573225.1| 3-isopropylmalate dehydratase, large subunit [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
Length = 457
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 205/429 (47%), Gaps = 72/429 (16%)
Query: 68 AMTLTEKIFSR-----ASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKV 122
A T+ +KI+ + + +PQL + VD+ + H+V P +F ++ N V
Sbjct: 2 AQTMFDKIWDKHVITGEAGQPQL-------IYVDLHLVHEVTSPQAFEGLREN---NRTV 51
Query: 123 WDREKIVIIPDHYIFTSD------ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPD 176
E+ DH + T D + + +D LR C E ++ + LG+ +
Sbjct: 52 RRPERTFATMDHNVPTEDIFNVKDVISRKQMDTLRKNCEEFGVR----LAALGDRQ---- 103
Query: 177 YKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVP 236
+G+ H Q G +PG+V++ DSHT T GAFG A GIG ++ V T + P
Sbjct: 104 -QGIIHAISPQLGLTQPGQVVVCGDSHTSTHGAFGSIAFGIGTSEVEHVFATQTIWQSKP 162
Query: 237 PTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMV 296
T+ + G++P + AKDLI+ +I + V T ++EF G T++R+SMEERMT+CNMV
Sbjct: 163 KTMGIHVTGKLPQGVYAKDLIMALIAQNGVDFGTGYAIEFYGDTIDRMSMEERMTICNMV 222
Query: 297 VEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSDEKASFLSEYRFDISKLE 347
+E G K+G++ D TTF Y+ + P + Y+D++++F +Y FD ++L
Sbjct: 223 IEGGAKSGIIKPDQTTFNYVAGREYAPQDMAAASEYWSQFYTDDESAFDKQYDFDATQLA 282
Query: 348 PLVAKPHSP----------------------DNRALA--RECKDVKIDRVYIGSCTGGKT 383
P V+ +P D L + +D+ + V+IGSCT G+
Sbjct: 283 PYVSWGTNPGMAVPIDQPFPEPVDINMQKAYDYEGLKPNGQARDIDLGFVFIGSCTNGRL 342
Query: 384 EDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPA 443
D AA + V +VPA++ + + + ++IF++AG +
Sbjct: 343 SDLEIAANIMRGRKIAPNVTALVVPASRAIRDEAER--------RGYAKIFQDAGYEW-R 393
Query: 444 SPSCGACLG 452
P C ACLG
Sbjct: 394 EPGCSACLG 402
>gi|209883430|ref|YP_002287287.1| isopropylmalate isomerase large subunit [Oligotropha
carboxidovorans OM5]
gi|337739488|ref|YP_004631216.1| 3-isopropylmalate dehydratase large subunit LeuC [Oligotropha
carboxidovorans OM5]
gi|386028506|ref|YP_005949281.1| 3-isopropylmalate dehydratase large subunit [Oligotropha
carboxidovorans OM4]
gi|226735985|sp|B6JAQ9.1|LEUC_OLICO RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|209871626|gb|ACI91422.1| 3-isopropylmalate dehydratase, large subunit [Oligotropha
carboxidovorans OM5]
gi|336093574|gb|AEI01400.1| 3-isopropylmalate dehydratase large subunit LeuC [Oligotropha
carboxidovorans OM4]
gi|336097152|gb|AEI04975.1| 3-isopropylmalate dehydratase large subunit LeuC [Oligotropha
carboxidovorans OM5]
Length = 470
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 203/441 (46%), Gaps = 76/441 (17%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +KI++ Q P + +D + H+V P +F + KV EK +
Sbjct: 6 TLYDKIWNDHLVDEQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRVA---GRKVHAPEKTL 60
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQ 187
+ DH + T+D R+ N D EQ + +D G F +G+ H+ +
Sbjct: 61 AVVDHNVPTTD-RSKPNPD---PESAEQIAALATNARDFGVQYFNEFDKRQGIVHVIGPE 116
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
+G PG ++ DSHT T GAFG A GIG ++ VL T ++ K +R V+DG++
Sbjct: 117 QGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKL 176
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
PD + AKD+IL IIGEI AG T +E+ G + L+ME RMT+CNM +E G + G+V
Sbjct: 177 PDGVTAKDIILAIIGEIGTAGGTGYVLEYAGEAIRALTMEGRMTICNMSIEGGARAGLVA 236
Query: 308 ADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP 356
D +++L+ + P ++ + SD+ A F E R D + L P+V SP
Sbjct: 237 PDEKAYEFLKGRPLTPKGANWEQAVRYWDTLRSDDNAHFDHEIRLDAANLPPIVTWGTSP 296
Query: 357 DN------------------------RALA-------RECKDVKIDRVYIGSCTGGKTED 385
++ RALA + D+K+DRV+IGSCT G+ ED
Sbjct: 297 EDVVSVAGFVPDPAKIEDEAKRLSKERALAYMGLNAGTKITDIKLDRVFIGSCTNGRIED 356
Query: 386 FLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAG 438
AAAKV +G V V + VPGSG + +IF +AG
Sbjct: 357 LRAAAKVI--NGHTVN-------------GHVNAMVVPGSGLVKEQAEAEGLDKIFIKAG 401
Query: 439 CDTPASPSCGACLGGPKDTYA 459
+ P C CL D A
Sbjct: 402 FEW-REPGCSMCLAMNPDKLA 421
>gi|414176903|ref|ZP_11431132.1| 3-isopropylmalate dehydratase large subunit [Afipia broomeae ATCC
49717]
gi|410887056|gb|EKS34868.1| 3-isopropylmalate dehydratase large subunit [Afipia broomeae ATCC
49717]
Length = 470
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 206/451 (45%), Gaps = 92/451 (20%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
A TL +KI++ Q P + +D + H+V P +F + KV +K
Sbjct: 4 ATTLYDKIWNDHLVDEQ--PDGTCLLYIDRHLVHEVTSPQAFEGLRNT---GRKVRAPQK 58
Query: 128 IVIIPDHYIFTSDERANRNVD--------ILRDFCMEQNIKYF--YDIKDLGNFKANPDY 177
+ + DH + T+D R+ N D L + E ++YF YD +
Sbjct: 59 TLAVVDHNVPTTD-RSKPNPDPESAEQIATLAENAREFGVEYFNEYDKR----------- 106
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
+G+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K
Sbjct: 107 QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAK 166
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
+R +DG++PD + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +
Sbjct: 167 NMRATVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRSLSMEGRMTVCNMSI 226
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKL 346
E G + G++ D +++L+ + P ++ + +DE A F E R D +KL
Sbjct: 227 EGGARAGLIAPDEKAYEFLKGRPMAPTGAAWEAGLRYWDTLRTDEGAHFDHEIRLDAAKL 286
Query: 347 EPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYI 375
P+V SP++ RAL + D+K+DR++I
Sbjct: 287 PPIVTWGTSPEDVVSISGFVPDPAKIEDEAKRLSKQRALDYMGLKPGTKITDIKLDRIFI 346
Query: 376 GSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GK 428
GSCT G+ ED AAAKV A V ++ + VPGSG +
Sbjct: 347 GSCTNGRIEDLRAAAKVV---------------AGHTVNGNLNAMIVPGSGLVKEQAEAE 391
Query: 429 TCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+IF +AG + P C CL D A
Sbjct: 392 GLDKIFIKAGFEW-REPGCSMCLAMNPDKLA 421
>gi|18313012|ref|NP_559679.1| 3-isopropylmalate dehydratase large subunit [Pyrobaculum aerophilum
str. IM2]
gi|22001772|sp|Q8ZW41.1|LEUC_PYRAE RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|18160513|gb|AAL63861.1| 3-isopropylmalate dehydratase large subunit (leuC) [Pyrobaculum
aerophilum str. IM2]
Length = 415
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 186/384 (48%), Gaps = 27/384 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
T TE I + K SPGD V + D++ HD+ G + E +V+DRE++V
Sbjct: 3 TWTEYILYKKLGKTP-SPGDVVEIVPDLVGFHDLTGYHVLEVL--ESMGKVEVFDRERVV 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ DH ++RA + +R + FYD+ G+ H + E
Sbjct: 60 VAFDHLSPPPNQRAAEIMVYIRRHVKALGLPNFYDVGG-----------GILH-QIILEK 107
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ PG+V+ DSHT TAGA G FA G+G TD L GK + VP R + GE P
Sbjct: 108 YALPGQVIFAADSHTNTAGAVGAFAHGMGATDIAAALKLGKTWIVVPAPFRIDVVGEFPI 167
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
++ KD+ L ++G+ G S+E T + M++R T+ NM E G + D
Sbjct: 168 GVMGKDVALHLLGQFGAEGFNGYSVEVFVETPKAFPMDDRATVANMSTEMGADALMFIPD 227
Query: 310 GTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVK 369
T +YL+ + + Y P E ++ +Y ++ +LEPLVA P+S DN RE + V+
Sbjct: 228 VITAEYLKTERGVDYTPP-RIEPGNYADKYTVELPRLEPLVAAPYSVDNIKSVREVEGVE 286
Query: 370 IDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKT 429
+D+V+IGSCT G+ D AAK+ G++VK +PA+ +V+ L
Sbjct: 287 VDQVFIGSCTNGRLSDIAVAAKIL--KGRRVKSRCIAIPASYEVFRRAMKL--------G 336
Query: 430 CSQIFEEAGCDTPASPSCGACLGG 453
+ EAGC +CG CLGG
Sbjct: 337 YIDVLTEAGCVVTYG-TCGPCLGG 359
>gi|150398253|ref|YP_001328720.1| isopropylmalate isomerase large subunit [Sinorhizobium medicae
WSM419]
gi|166989764|sp|A6UE05.1|LEUC_SINMW RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|150029768|gb|ABR61885.1| 3-isopropylmalate dehydratase, large subunit [Sinorhizobium medicae
WSM419]
Length = 469
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 189/408 (46%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRIA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + + +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALARNAADFGVEYYSESDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF Y+ED+ P
Sbjct: 203 VIEFAGEAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFAYIEDRPRAPKGEAWDMAV 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ +++DE A + D + L P+V+ SP++
Sbjct: 263 EYWKTLHTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDEIPDETKRTSK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL D+ IDRV+IGSCT G+ ED A AKV G+KV PT
Sbjct: 323 WRALDYMGLKPGTRITDIAIDRVFIGSCTNGRIEDLRAVAKVV--EGRKV-APT------ 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF EAG D P C CL
Sbjct: 374 ------VSAMIVPGSGLVKEQAEVEGLDKIFREAGFDW-REPGCSMCL 414
>gi|300778177|ref|ZP_07088035.1| 3-isopropylmalate dehydratase large subunit [Chryseobacterium gleum
ATCC 35910]
gi|300503687|gb|EFK34827.1| 3-isopropylmalate dehydratase large subunit [Chryseobacterium gleum
ATCC 35910]
Length = 462
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 191/406 (47%), Gaps = 63/406 (15%)
Query: 93 VNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFT-------SDERANR 145
+ +D + H+V P +F + N +++ E+IV DH + T DE +
Sbjct: 28 IYIDKHLIHEVTSPQAFAELESR---NLEIFRPEQIVATADHNVPTLHQEQPIRDELSRN 84
Query: 146 NVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC 205
V+ L + C + NI+ F LG+ Y+G+ HI + G +PG ++ DSHT
Sbjct: 85 QVEQLTENCKKNNIELF----GLGH-----QYQGIVHIIAPELGITQPGMSIVCGDSHTS 135
Query: 206 TAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEIS 265
T GAFG A GIG + V + +LL P ++R ++G++ + + KD+IL II +I
Sbjct: 136 THGAFGTIAFGIGTSQVAQVFASQCLLLNKPKSMRITVNGKLNENVQPKDVILYIISKIG 195
Query: 266 VAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-- 323
G T E+ G E +SME RMT+CNM +E G + G++ D TTF+Y++ + P
Sbjct: 196 TDGGTGYFCEYAGNVFEEMSMEGRMTVCNMSIEMGARGGMIAPDETTFEYVKGRKFSPVG 255
Query: 324 ---------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP-----------------D 357
++ + +DE A F E FD S + P++ +P +
Sbjct: 256 EEWEEKVEYWKTLKTDEGAVFDKELSFDASDIYPMITYGTNPGMGISIREVIPAPQNESE 315
Query: 358 NRAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
+AL + +K++ V+IGSCT + EDF +AA+ K V +VP +
Sbjct: 316 EKALQYMGLEAGQAVNSIKVNYVFIGSCTNARIEDFRSAAQYIKGKSKAEAVKALIVPGS 375
Query: 411 QKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKD 456
Q+V +Y + +IF +AG P C ACL D
Sbjct: 376 QQVVKQIYE--------EGLDKIFNDAGFQI-RQPGCSACLAMNDD 412
>gi|167032526|ref|YP_001667757.1| isopropylmalate isomerase large subunit [Pseudomonas putida GB-1]
gi|189046483|sp|B0KF81.1|LEUC_PSEPG RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|166859014|gb|ABY97421.1| 3-isopropylmalate dehydratase, large subunit [Pseudomonas putida
GB-1]
Length = 477
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 73/434 (16%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K++ A E + G ++ + +D + H+V P +F + N K W + +
Sbjct: 5 TLYDKLWE-AHEVKRRDDGSSL-IYIDRHIIHEVTSPQAFEGLRLA---NRKPWRIDTNI 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD---LGNFKANPDYKGVCHIALA 186
PDH + T+ ER ++ + D ++ + D + FK N + +G+ H+
Sbjct: 60 ATPDHNVPTTPERKG-GIEAIVDQVSRLQVQTLDENCDEYGIVEFKMNDERQGIVHVISP 118
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K + ++G+
Sbjct: 119 EQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMLVRVEGQ 178
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P + AKD++L +IG+I AG +MEF G+ + LSME RMT+CNM +EAG + G+V
Sbjct: 179 LPAGVTAKDIVLAVIGKIGTAGGNGHAMEFAGSAIRELSMEGRMTICNMSIEAGARVGLV 238
Query: 307 PADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHS 355
D TT Y+E + P ++ + SDE A F + D S+++P V+ S
Sbjct: 239 ATDATTVAYVEGRPYAPKGEQWKQAVESWKDLVSDEDAVFDTVVELDASQIKPQVSWGTS 298
Query: 356 PD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTE 384
P+ RAL + D+K+DRV+IGSCT + E
Sbjct: 299 PEMVLAVDQRVPDPAAEADLVKRGSIERALKYMGLTANQAITDIKLDRVFIGSCTNSRIE 358
Query: 385 DFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEA 437
D AAA++ A G+K V A+ K + VPGSG + +IF EA
Sbjct: 359 DLRAAAEI--AKGRK-------VAASVK-----QAIVVPGSGLVKAQAEREGLDKIFLEA 404
Query: 438 GCDTPASPSCGACL 451
G + P C CL
Sbjct: 405 GFEW-REPGCSMCL 417
>gi|344212894|ref|YP_004797214.1| aconitate hydratase [Haloarcula hispanica ATCC 33960]
gi|343784249|gb|AEM58226.1| aconitate hydratase [Haloarcula hispanica ATCC 33960]
Length = 657
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAAPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|448637789|ref|ZP_21675931.1| aconitate hydratase [Haloarcula sinaiiensis ATCC 33800]
gi|448654889|ref|ZP_21681741.1| aconitate hydratase [Haloarcula californiae ATCC 33799]
gi|445764053|gb|EMA15220.1| aconitate hydratase [Haloarcula sinaiiensis ATCC 33800]
gi|445765338|gb|EMA16476.1| aconitate hydratase [Haloarcula californiae ATCC 33799]
Length = 657
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAAPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|448626895|ref|ZP_21671570.1| aconitate hydratase [Haloarcula vallismortis ATCC 29715]
gi|445759523|gb|EMA10799.1| aconitate hydratase [Haloarcula vallismortis ATCC 29715]
Length = 657
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAAPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|398355580|ref|YP_006401044.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium fredii
USDA 257]
gi|390130906|gb|AFL54287.1| 3-isopropylmalate dehydratase large subunit LeuC [Sinorhizobium
fredii USDA 257]
Length = 469
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 189/408 (46%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALAKNAADFGVEYYSENDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF+Y+++K P
Sbjct: 203 VIEFAGEAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFEYIKNKPRAPTGKAWDMAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ +++DE A + D + L P+V+ SP++
Sbjct: 263 DYWKTLHTDEGAHYDRVVVLDAASLPPIVSWGSSPEDVISVQGVVPNPDDIQDETKRTSK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ +DRV+IGSCT G+ ED A AKV G+KV
Sbjct: 323 WRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAVAKVV--EGRKVA--------- 371
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF EAG D P C CL
Sbjct: 372 ----STVSAMIVPGSGLVKEQAEAEGLDKIFREAGFDW-REPGCSMCL 414
>gi|378827758|ref|YP_005190490.1| 3-isopropylmalate dehydratase large subunit [Sinorhizobium fredii
HH103]
gi|365180810|emb|CCE97665.1| 3-isopropylmalate dehydratase, large subunit [Sinorhizobium fredii
HH103]
Length = 469
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 188/408 (46%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS +R++ I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPEKTLAVVDHNVPTS---PDRHLGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + D G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALARNAADFGVEYYSENDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGH 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+EF G + LSME RMT+CNM +E G + G++ D TTF Y++DK P
Sbjct: 203 VIEFAGEAIRSLSMEGRMTICNMTIEGGARAGLIAPDETTFDYIKDKPRAPKGKAWDMAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + +DE A + D + L P+V+ SP++
Sbjct: 263 DYWKTLNTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDDIQEETKRASK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL + D+ IDRV+IGSCT G+ ED A AKV G+KV
Sbjct: 323 WRALDYMGLKPDTKITDIAIDRVFIGSCTNGRIEDLRAVAKVV--EGRKVAST------- 373
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+EAG D P C CL
Sbjct: 374 ------VSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCL 414
>gi|55378859|ref|YP_136708.1| aconitate hydratase [Haloarcula marismortui ATCC 43049]
gi|55231584|gb|AAV47003.1| aconitate hydratase [Haloarcula marismortui ATCC 43049]
Length = 677
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 22 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 78
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 79 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 123
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 124 HKENFAAPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 183
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 184 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 243
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 244 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 303
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 304 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 348
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 349 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 382
>gi|148251971|ref|YP_001236556.1| isopropylmalate isomerase large subunit [Bradyrhizobium sp. BTAi1]
gi|146404144|gb|ABQ32650.1| 3-isopropylmalate dehydratase, large subunit [Bradyrhizobium sp.
BTAi1]
Length = 468
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 191/409 (46%), Gaps = 76/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVD---ILR 151
+D + H+V P +F + KV EK + + DH + T+D R+ N D I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPDPESIEQ 84
Query: 152 DFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211
+ +N + F I+ F +G+ H+ ++G PG ++ DSHT T GAFG
Sbjct: 85 IKTLAENAREF-GIEYYNEFDRR---QGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFG 140
Query: 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271
A GIG ++ VL T ++ K +R +DG++PD + KD+IL IIGEI AG T
Sbjct: 141 ALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGKLPDGVTGKDIILAIIGEIGTAGGTG 200
Query: 272 KSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-------- 323
+E+ G + LSME RMT+CNM +E G + G+V D + +L + P
Sbjct: 201 YVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDEKAYDFLRGRPKAPKGAAWDAA 260
Query: 324 ---YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN---------------------- 358
+E + SD+ A F E R D +KL P+V SP++
Sbjct: 261 MRYWETLRSDDGAHFDHEIRLDAAKLPPIVTWGTSPEDVISVTGVVPDPDKIADEAKRIS 320
Query: 359 --RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPA 409
RAL + D+K+DRV+IGSCT G+ ED AAAK+ A GK V
Sbjct: 321 KHRALKYMGLTAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKI--AEGKTVSA------- 371
Query: 410 TQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF +AG + P C CL
Sbjct: 372 ------HVNAMVVPGSGIVKEQAEAEGLDKIFIKAGFEW-REPGCSMCL 413
>gi|448665273|ref|ZP_21684548.1| aconitate hydratase [Haloarcula amylolytica JCM 13557]
gi|445772954|gb|EMA23988.1| aconitate hydratase [Haloarcula amylolytica JCM 13557]
Length = 657
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 186/396 (46%), Gaps = 46/396 (11%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
TLTEKI + +L+PG+ + + +D ++T D G + F+ E + E
Sbjct: 2 GQTLTEKILDDHLVEGELTPGEEIGIEIDQVLTQDTTGTLVWLQFEALGLEEVQT---EL 58
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDY--KGVCHIAL 185
DH + D + + LR G F A+ G+CH +
Sbjct: 59 AAQYCDHQTYQFDFKNTDDHRFLRSAA--------------GTFGAHFSRPGNGICH-NV 103
Query: 186 AQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDG 245
+E PG+ +LG+DSHT T G G+ A G G D +G G +++P + L+G
Sbjct: 104 HKENFAAPGKTMLGSDSHTPTPGGLGELAIGSGGLDVAVAMGGGAYYIEMPEVVNVRLEG 163
Query: 246 EMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGV 305
E+P++ AKD+IL+++ +SV G K +E+ G VE L++ ER T+ NM E G + +
Sbjct: 164 ELPEWATAKDVILELLRRLSVKGGVGKVLEYTGPGVETLTVPERTTITNMGTELGATSSI 223
Query: 306 VPADGTTFKYLED-KTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARE 364
P D T YLE +E + DE A + E D+S LEPL+A+P PDN E
Sbjct: 224 FPTDDQTKDYLERLGREDVFEDIGPDEDAEYADEIVVDLSDLEPLIAEPSMPDNVVPVSE 283
Query: 365 CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPG 424
+ V +++V IGSCT G ED L AAK+ G+ + T ++ A PG
Sbjct: 284 VEGVDVEQVMIGSCTNGAYEDILPAAKML--EGRNIDKKTEMIVA-------------PG 328
Query: 425 SGGKTCSQIFEEAGCDTP--------ASPSCGACLG 452
S K S++ G + +CGAC+G
Sbjct: 329 S--KQASEMLAREGWTAEMMAAGVNFSEATCGACIG 362
>gi|357386266|ref|YP_004900990.1| 3-isopropylmalate dehydratase large subunit [Pelagibacterium
halotolerans B2]
gi|351594903|gb|AEQ53240.1| 3-isopropylmalate dehydratase large subunit [Pelagibacterium
halotolerans B2]
Length = 469
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 190/414 (45%), Gaps = 70/414 (16%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV E+ + + DH + TSD + V
Sbjct: 28 IDRHLVHEVTSPQAFEGLRLS---GRKVRAPERTLAVVDHNVPTSDRTHGIDDPESKIQV 84
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
D L ++ ++Y+ ++ D+ +G+ HI ++G PG ++ DSHT T
Sbjct: 85 DTLAKNAVDFGVEYYNEL-DM--------RQGIVHIVGPEQGFTLPGMTIVCGDSHTSTH 135
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ +R ++G +PD + AKD+IL IIGEI A
Sbjct: 136 GAFGALAHGIGTSEVEHVLATQTLIQSKAKNMRVTVNGSLPDGVTAKDIILAIIGEIGTA 195
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G +EF G + LSME RMT+CNM +E G + G++ D TF Y++D+ P
Sbjct: 196 GGNGHVIEFAGQAIRELSMEGRMTVCNMTIEGGARAGLIAPDEKTFAYVKDRPRAPKGKA 255
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
++ +Y+DE A+F E D + L P+V+ SP++
Sbjct: 256 YDMALDYWKSLYTDEGATFDKEVVLDAANLPPIVSWGSSPEDVISVTGAVPNPDDIADAN 315
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + D+++DRV++GSCT G+ ED AAA + +V
Sbjct: 316 RRASKKRALEYMGLTAGTKITDIELDRVFLGSCTNGRIEDLRAAAAIVKGHTVHPRVNAM 375
Query: 406 LVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYA 459
+VP + V + + +IF AG D P C CL D A
Sbjct: 376 VVPGSGLVKAQ--------AEAEGLDKIFIAAGFDW-REPGCSMCLAMNADKLA 420
>gi|162456969|ref|YP_001619336.1| 3-isopropylmalate dehydratase [Sorangium cellulosum So ce56]
gi|161167551|emb|CAN98856.1| 3-isopropylmalate dehydratase [Sorangium cellulosum So ce56]
Length = 662
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 206/443 (46%), Gaps = 52/443 (11%)
Query: 51 APQQSERRPATTGSVKNAMTLTEKIFS-------RASE--KPQLSPGDNVWVNVDILMTH 101
A E P T + MTL EKI + RA + P + PGD ++ +D+ +H
Sbjct: 184 ARMAGEVSPPTLATPPRPMTLCEKIIAAHAIVDARAGKIGVPAVKPGDALFARIDVRFSH 243
Query: 102 DVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSD------------ERANRNVDI 149
+ P + +F+ G A V + E + DH F E+A +
Sbjct: 244 EYVTPMAESLFRAGVGPEAVVTEPESVFAFRDHLTFLDRVMPEAHLRLGLREQAASLATV 303
Query: 150 LRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGA 209
+ F IK + +++ G + + +CH + +E PG+++ GTDSHTC AGA
Sbjct: 304 QQAFTERHGIKLYGEVERDGRTVGS---EAICHNKVIEE-LALPGQIVAGTDSHTCMAGA 359
Query: 210 FGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGE--ISVA 267
G FA G+G+TD T V + VP ++RF L G + + AKD++L ++
Sbjct: 360 LGCFAFGVGSTDMANAWLTRDVRVAVPQSVRFNLIGRLGPGVTAKDVMLFLLSRPFWKTG 419
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLPYEP- 326
K +EF G V + ++ER TL NM VEAGG G++ AD +YL ++ L E
Sbjct: 420 QGIGKVLEFAGDGVRAMGLDERATLTNMAVEAGGFTGIIEADEEIVRYLVEQRGLAAEDV 479
Query: 327 ----VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD-----VKIDRVYIGS 377
V +D A +++ + D++ +EP+VA P P N R + VKID Y GS
Sbjct: 480 RARIVRADPGAEYMATFDVDLASVEPMVATPGDPRNGVPLRSLDEAAGGPVKIDIAYGGS 539
Query: 378 CTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQ 432
CTGGK D A V + GK+V V ++ +Q + K +
Sbjct: 540 CTGGKKADMDMYASVLRQAVERGKRVADGVHLYIQFGSQDIRRYAEA--------KGYLE 591
Query: 433 IFEEAGCDTPASPSCGACL-GGP 454
IFE+AG + PSCGAC+ GP
Sbjct: 592 IFEKAGAEL-VDPSCGACIKAGP 613
>gi|163761426|ref|ZP_02168500.1| isopropylmalate isomerase large subunit [Hoeflea phototrophica
DFL-43]
gi|162281421|gb|EDQ31718.1| isopropylmalate isomerase large subunit [Hoeflea phototrophica
DFL-43]
Length = 469
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 190/414 (45%), Gaps = 85/414 (20%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANR--------N 146
+D + H+V P +F + + KV EK + + DH + TS +RA
Sbjct: 29 IDRHLVHEVTSPQAFEGLRTT---HRKVRAPEKTLAVVDHNVPTSPDRAQGIKNEESRIQ 85
Query: 147 VDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
V+ L E ++Y + N +G+ HI ++G PG ++ DSHT T
Sbjct: 86 VEALATNSAEFGVEYLNE---------NDKRQGIVHIVGPEQGFTLPGTTIVCGDSHTST 136
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG A GIG ++ VL T ++ K + ++GE+P+ + AKD+IL IIGEI
Sbjct: 137 HGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVEVNGELPEGVTAKDIILAIIGEIGT 196
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--- 323
AG T +EF G + LSME RMT+CNM +E G + G++ D T+ Y +D+ P
Sbjct: 197 AGGTGHVIEFAGEAIRALSMEGRMTVCNMTIEGGARAGLIAPDEKTYAYFKDRPRAPKGK 256
Query: 324 --------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN-----------RALARE 364
++ + SDE A + R D + L P+V+ SP++ +A E
Sbjct: 257 AWDMAVEYWKTLPSDEGAHYDKIVRLDAASLPPIVSWGSSPEDVISVTGAVPNPDDIADE 316
Query: 365 CK--------------------DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT 404
K D+ IDRV+IGSCT G+ ED AAAKV GK V PT
Sbjct: 317 AKRTSKWRALDYMGLKPGTPITDITIDRVFIGSCTNGRIEDLRAAAKVV--EGKTVS-PT 373
Query: 405 FLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF+ AG D P C CL
Sbjct: 374 ------------VDAMIVPGSGLVKEQAEAEGLDKIFKAAGFDW-REPGCSMCL 414
>gi|304320825|ref|YP_003854468.1| isopropylmalate isomerase large subunit [Parvularcula bermudensis
HTCC2503]
gi|303299727|gb|ADM09326.1| isopropylmalate isomerase large subunit [Parvularcula bermudensis
HTCC2503]
Length = 467
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 200/432 (46%), Gaps = 72/432 (16%)
Query: 67 NAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDRE 126
A TL +K++ R +P+ + ++V + + H+V P +F + + + KV +
Sbjct: 2 TAKTLFQKVWERNLVRPETVDSPAI-LHVGLHLVHEVTSPQAFTVLDQR---DLKVRRPD 57
Query: 127 KIVIIPDHYIFT-----------SDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANP 175
+ + DH + T + A + V LR C I DLG+
Sbjct: 58 RTLATIDHSVPTLPADAEGRLPYATAAAEKQVAALRRNCARHGITLL----DLGD----- 108
Query: 176 DYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKV 235
D +G+ H+ + G PG V++ DSHT T GAFG A GIG T+ G VL T +L +
Sbjct: 109 DRRGIVHMVGPELGRTHPGAVVVCGDSHTSTHGAFGALAFGIGTTEVGHVLATQCLLQRK 168
Query: 236 PPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNM 295
P TLR + +G + + AKD+ L +I + + G T +E+ G V LSME RMTLCN+
Sbjct: 169 PRTLRVMFEGTCAEGVTAKDMALTVIAHLGMDGGTGHVIEYAGEAVRALSMEGRMTLCNL 228
Query: 296 VVEAGGKNGVVPADGTTFKYLEDKTSLP---------YEPVYSDEKASFLSEYRFDISKL 346
+EAG + G+V D TTF YL + P + +++D+ A F E D + +
Sbjct: 229 SIEAGARAGMVAPDETTFAYLTGRPGAPTDWEGAVTAWRDLHTDDGAEFDKEIVVDAAAI 288
Query: 347 EPLV---AKPH----------SPDNRALARECKDV------------KIDRVYIGSCTGG 381
P+V PH +P N A AR D K+DRV++GSCT G
Sbjct: 289 RPMVTYGVSPHEALPATGDVPAPANDA-ARTALDYMGFQPGDPLAARKVDRVFVGSCTNG 347
Query: 382 KTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGC 439
+ ED AAA + G+++ V +VP ++ V + + Q+F AG
Sbjct: 348 RLEDLRAAANIL--KGRRIADHVTMLVVPGSEAVKR--------AAEAEGLDQVFMTAGA 397
Query: 440 DTPASPSCGACL 451
+ P C C+
Sbjct: 398 EW-REPGCSMCI 408
>gi|83859997|ref|ZP_00953517.1| isopropylmalate isomerase large subunit [Oceanicaulis sp. HTCC2633]
gi|83852356|gb|EAP90210.1| isopropylmalate isomerase large subunit [Oceanicaulis sp. HTCC2633]
Length = 479
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 190/429 (44%), Gaps = 70/429 (16%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EK++ +P+ + V +D+ + H+V P +F ++ KV +++
Sbjct: 13 TLFEKVWDAHLIQPETDAAPAL-VYIDLHLIHEVTSPQAFTALEQR---GLKVRRPDRVY 68
Query: 130 IIPDHYIFTS-----------DERANRNVDILRDFCMEQNIKYF-YDIKDLGNFKANPDY 177
DH T+ + A + V+ L D C I+ +D +P+
Sbjct: 69 GTLDHSTPTTPRAPGSKPIYINAAAKKQVETLEDNCRRHGIRLAGWD---------SPE- 118
Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPP 237
+G+ H+ + G +PG ++ DSHT T GAFG A GIG T+ G VL T +L P
Sbjct: 119 RGIVHVIGPELGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTTEVGHVLATQSLLQSKPR 178
Query: 238 TLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVV 297
T+R +DG +P + KDLIL II E+ GA+ +E+ G +E LSMEERMT+CNM +
Sbjct: 179 TMRVTVDGRLPHGVGGKDLILAIIAELGAGGASGHVIEYAGEAIEALSMEERMTVCNMSI 238
Query: 298 EAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKL 346
EAG + G++ D TTF +L+ + P + + SD A F +E R D SKL
Sbjct: 239 EAGARAGMIAPDATTFAWLDGRKHAPKGAAWEAAKARWASLKSDPDARFDAEVRLDGSKL 298
Query: 347 EPLVAKPHSPDNRA------------------------LARECKDVKIDRVYIGSCTGGK 382
P+V SPD A ID V++GSCT +
Sbjct: 299 APMVTWGDSPDMAAPIDASVPRAPEGPAAEALNYMGFKAGEALMGETIDAVFVGSCTNAR 358
Query: 383 TEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTP 442
D AA V K V +VP +++V + IF AG +
Sbjct: 359 LSDLREAAAVIAGRHVKPGVRMLVVPGSEEVKRQAEA--------EGLDAIFRTAGAEW- 409
Query: 443 ASPSCGACL 451
P C C+
Sbjct: 410 REPGCSMCI 418
>gi|182679066|ref|YP_001833212.1| 3-isopropylmalate dehydratase large subunit [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182634949|gb|ACB95723.1| 3-isopropylmalate dehydratase, large subunit [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 470
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 186/421 (44%), Gaps = 84/421 (19%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDE-------RANRNV 147
+D + H+V P +F + KV +K + + DH + T+D + V
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRKVRAPQKTLAVVDHNVPTTDRSHGIEDPESRIQV 85
Query: 148 DILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTA 207
L E I+YF A +GV HI ++G PG ++ DSHT T
Sbjct: 86 AQLAANAAEFGIEYF---------DALDHRQGVVHIIGPEQGFTLPGTTIVCGDSHTSTH 136
Query: 208 GAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVA 267
GAFG A GIG ++ VL T ++ +R ++DG +PD++ AKDLIL IIG+I A
Sbjct: 137 GAFGALAHGIGTSEVEHVLATQTLIQAKAKNMRVLVDGVLPDHVSAKDLILAIIGQIGTA 196
Query: 268 GATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP---- 323
G T +E+ G + LS+E RMT+CNM +E G + G++ D TF YL+D+ P
Sbjct: 197 GGTGHVIEYAGEAIRALSVEGRMTVCNMTIEGGARAGMIAPDAKTFAYLKDRPKSPRGAA 256
Query: 324 -------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------ 358
+E ++SDE A F E R D + L P V SP++
Sbjct: 257 WDAAVAYWETLHSDEGAVFDREIRLDAANLPPTVTWGTSPEDVASINGVVPSPQDATSEA 316
Query: 359 ------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTF 405
RAL + + IDRV+IGSCT G+ ED AAK+ GK +
Sbjct: 317 KKASIARALEYMGLKGGEKLTSIAIDRVFIGSCTNGRIEDLREAAKIV--QGKHIAA--- 371
Query: 406 LVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTY 458
V L VPGSG + IF+ AG + P C CL D
Sbjct: 372 ----------SVNGLVVPGSGLVKEQAEAEGLDVIFKAAGFEW-REPGCSMCLAMNPDKL 420
Query: 459 A 459
A
Sbjct: 421 A 421
>gi|110635776|ref|YP_675984.1| isopropylmalate isomerase large subunit [Chelativorans sp. BNC1]
gi|123353094|sp|Q11CQ6.1|LEUC_MESSB RecName: Full=3-isopropylmalate dehydratase large subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|110286760|gb|ABG64819.1| 3-isopropylmalate dehydratase, large subunit [Chelativorans sp.
BNC1]
Length = 469
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 192/409 (46%), Gaps = 75/409 (18%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS--------DERANRN 146
+D + H+V P +F + V EK + + DH + TS +E +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMA---GRAVRHPEKTLAVVDHNVPTSPDRKFGIKNEESRIQ 85
Query: 147 VDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCT 206
V+ L ++ I+Y+ + +G+ HI ++G PG ++ DSHT T
Sbjct: 86 VEALAKNAVDFGIEYYNEADR---------RQGIVHIVGPEQGFTLPGMTIVCGDSHTST 136
Query: 207 AGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISV 266
GAFG A GIG ++ VL T ++ + + +DG++PD + AKD+IL IIGEI
Sbjct: 137 HGAFGALAHGIGTSEVEHVLATQTLIQRKAKNMLVQVDGKLPDGVTAKDIILAIIGEIGT 196
Query: 267 AGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--- 323
AG T +E+ G + LSME RMT+CNM +E G + G++ D TT+ Y++D+ P
Sbjct: 197 AGGTGHVIEYAGEAIRSLSMEGRMTVCNMSIEGGARAGMIAPDETTYAYIKDRPRAPKGA 256
Query: 324 --------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------- 358
+E +++DE A F + D + L P+V SP++
Sbjct: 257 AWEMARAYWETLHTDEGAHFDRVVKLDAANLPPIVTWGSSPEDVVSVTGYVPNADEIQDE 316
Query: 359 -------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KV 402
RAL + D+ +DRV+IGSCT G+ ED AAAK+ A G+KV ++
Sbjct: 317 TKRLSKKRALEYMGLTAGTKITDIALDRVFIGSCTNGRIEDLRAAAKI--AEGRKVHPRI 374
Query: 403 PTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACL 451
+VP + L + + +IF EAG D P C CL
Sbjct: 375 NAMIVPGS--------GLVKAQAEAEGLDKIFIEAGFDW-REPGCSMCL 414
>gi|386842746|ref|YP_006247804.1| isopropylmalate isomerase large subunit [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374103047|gb|AEY91931.1| isopropylmalate isomerase large subunit [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451796038|gb|AGF66087.1| isopropylmalate isomerase large subunit [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 474
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 207/447 (46%), Gaps = 88/447 (19%)
Query: 70 TLTEKIFS-----RASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWD 124
TL EK++ RA +P L + +D+ + H+V P +F +K N +
Sbjct: 4 TLAEKVWDDHVVRRAEGEPDL-------LYIDLHLLHEVTSPQAFDGLRK----NGRQVR 52
Query: 125 REKIVI-IPDHYIFT-------SDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPD 176
R + I DH T +D + ++ LR C E ++ + LG+ +
Sbjct: 53 RLDLTIATEDHNTPTLDIDKPIADPVSRAQLETLRKNCAEFGVR----LHPLGDVE---- 104
Query: 177 YKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVP 236
+GV H+ Q G +PG ++ DSHT T GAFG A GIG + VL T + L P
Sbjct: 105 -QGVVHVVGPQLGLTQPGTTVVCGDSHTSTHGAFGALAFGIGTSQVEHVLATQTLPLARP 163
Query: 237 PTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMV 296
T+ +DGE+P+ + AKDLIL II +I G +E+ G+ +E+LSME RMT+CNM
Sbjct: 164 KTMAITVDGELPEGVTAKDLILAIIAKIGTGGGQGYILEYRGSAIEKLSMEARMTICNMS 223
Query: 297 VEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISK 345
+EAG + G++ D TTF YL+ + P ++ + +DE A F +E D ++
Sbjct: 224 IEAGARAGMIAPDETTFAYLKGRPHAPEGADWDAAVAYWKTLRTDEDAVFDAEVVIDAAE 283
Query: 346 LEPLVA-----------KPHSPD-------NRALARE-------------CKDVKIDRVY 374
L P V H PD + LA E + + +D V+
Sbjct: 284 LSPFVTWGTNPGQGAPLSAHVPDPASYEDASERLAAEKALEYMGLEAGQPLRSIDVDTVF 343
Query: 375 IGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQ 432
+GSCT G+ ED AAA + G+KV V +VP + +V + + +
Sbjct: 344 VGSCTNGRIEDLRAAADIL--RGRKVADGVRMLVVPGSARVGLQAVS--------EGLDV 393
Query: 433 IFEEAGCDTPASPSCGACLGGPKDTYA 459
+F+EAG + + C CLG D A
Sbjct: 394 VFKEAGAEWRHA-GCSMCLGMNPDQLA 419
>gi|299133095|ref|ZP_07026290.1| 3-isopropylmalate dehydratase, large subunit [Afipia sp. 1NLS2]
gi|298593232|gb|EFI53432.1| 3-isopropylmalate dehydratase, large subunit [Afipia sp. 1NLS2]
Length = 502
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 211/452 (46%), Gaps = 77/452 (17%)
Query: 52 PQQSERRPATTGS-VKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFG 110
P + +R+P+ + + TL +KI++ Q P + +D + H+V P +F
Sbjct: 19 PTRHKRKPSKAKTTMAKPTTLYDKIWNDHLVDEQ--PDGTCLLYIDRHLVHEVTSPQAFE 76
Query: 111 IFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLG- 169
+ KV EK + + DH + T+D R+ N D EQ + ++ G
Sbjct: 77 GLRTA---GRKVHAPEKTLAVVDHNVPTTD-RSKPNPD---PESAEQIAALATNAREFGV 129
Query: 170 -NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGT 228
F +G+ H+ ++G PG ++ DSHT T GAFG A GIG ++ VL T
Sbjct: 130 QYFNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLAT 189
Query: 229 GKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEE 288
++ K +R V+DG++P+ + AKD+IL IIGEI AG T +E+ G + L+ME
Sbjct: 190 QTLIQKKAKNMRAVVDGKLPEGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRALTMEG 249
Query: 289 RMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLS 337
RMT+CNM +E G + G+V D +++L+ + P ++ + SD+ A F +
Sbjct: 250 RMTVCNMSIEGGARAGLVAPDEKAYEFLKGRPLSPKGARWEEAVRYWDTLRSDDGAHFDA 309
Query: 338 EYRFDISKLEPLVAKPHSPDN------------------------RALA-------RECK 366
E R D + L P+V SP++ RALA +
Sbjct: 310 EIRLDAANLPPIVTWGTSPEDVASVAGFVPDPAKIQDEAKRLSKERALAYMGLKAGTKIT 369
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG 426
D+K+DRV+IGSCT G+ ED AAAKV +G V V + VPGSG
Sbjct: 370 DIKLDRVFIGSCTNGRIEDLRAAAKVV--NGHTVN-------------GHVNAMVVPGSG 414
Query: 427 -------GKTCSQIFEEAGCDTPASPSCGACL 451
+ +IF +AG + P C CL
Sbjct: 415 LVKEQAEAEGLDKIFLKAGFEW-REPGCSMCL 445
>gi|322436351|ref|YP_004218563.1| 3-isopropylmalate dehydratase large subunit [Granulicella
tundricola MP5ACTX9]
gi|321164078|gb|ADW69783.1| 3-isopropylmalate dehydratase, large subunit [Granulicella
tundricola MP5ACTX9]
Length = 497
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 191/436 (43%), Gaps = 92/436 (21%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS---------DERANR 145
+D+ + H+V P +F + N K+ ++ + DH + TS D ANR
Sbjct: 33 IDLHLVHEVTSPQAFDGLRMA---NRKLRRPDRTLATVDHNVPTSSIQDRLHILDPIANR 89
Query: 146 NVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTC 205
++ LR C + ++ F D++ P+ +G+ H+ + G +PG ++ DSHT
Sbjct: 90 QIEALRQNCADFGVQLF-DVQ-------APE-QGIVHMIGPELGATKPGMTIVCGDSHTS 140
Query: 206 TAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEIS 265
T GAFG A GIG ++ V+ T + P T R +DGE+P + AKD++L IIGEI
Sbjct: 141 THGAFGALAFGIGTSEVEHVMATQTLPQDKPKTFRITVDGELPYGVTAKDIVLHIIGEIG 200
Query: 266 VAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKT----- 320
AGAT +E+ G+ + LSME RMT+CNM +EAG + G++ D TTF YL +
Sbjct: 201 TAGATGHVVEYAGSAIRALSMEGRMTVCNMSIEAGARAGMIAPDQTTFDYLRGRRFSPAL 260
Query: 321 ---SLPYEPV-----------------------YSDEKASFLSEYRFDISKLEPLVAKPH 354
++P +P +DE A+F E D ++L P V
Sbjct: 261 TIPNIPMDPAQFGKAMKGATSPWNEAVAQWSTFVTDEGATFDRELFIDATRLTPTVTWGT 320
Query: 355 SP--------------------DNRALAREC-----------KDVKIDRVYIGSCTGGKT 383
SP D + R +++ +DRV+IGSCT +
Sbjct: 321 SPGMVTGIDSNVPTLPAGASEADQKGFERALEYMDLKSGTPMQEIAVDRVFIGSCTNARI 380
Query: 384 EDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPA 443
ED AAA + V +VP +Q V + IF AG D
Sbjct: 381 EDLRAAAALVRGYHVATTVKAMVVPGSQSVKAQAEE--------EGLDHIFTTAGFDW-R 431
Query: 444 SPSCGACLGGPKDTYA 459
P C CLG D A
Sbjct: 432 EPGCSMCLGMNPDILA 447
>gi|282856930|ref|ZP_06266185.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
gi|282585221|gb|EFB90534.1| 3-isopropylmalate dehydratase large subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
Length = 423
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 196/386 (50%), Gaps = 29/386 (7%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL EKI S + + G+ V V+V+ HD GP + K+ + V+D K++
Sbjct: 8 TLVEKILSENVGR-SVKAGETVVVDVNFAALHDGSGPLLVRLMKERGYDKDPVFDPRKVL 66
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEG 189
+ ++ E AN + + R++ + F++ G+ A+ E
Sbjct: 67 FANEFGPESTREVANEHA-LCREYANSHHC--FWEEGATGHVHAH-----------VYES 112
Query: 190 HCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPD 249
+ + G V + DSHT GAFG FATG G+TD V GK ++VP T R + G++P
Sbjct: 113 YLKCGTVCIIGDSHTTVHGAFGCFATGCGSTDMVAVTRFGKTWIRVPATFRVNVTGKLPK 172
Query: 250 YLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD 309
+ +KD++L++ I A YKS+EF G T+ LS E R+T+ +M V+ G KN ++ D
Sbjct: 173 AVYSKDIMLKLASIIKSDQAIYKSLEFRGDTIHSLSQEARLTITSMGVDLGAKNAIMETD 232
Query: 310 GTTFKYLEDK-TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDV 368
T ++L Y + +D+ A++ D++KLEPLV+KPH +N L + C+D
Sbjct: 233 DHTREFLRQMGREEDYREIVADDDANYERVIDIDVTKLEPLVSKPHYVENVDLVKNCEDE 292
Query: 369 KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSG 426
K++ +Y+GSCT G+ ED AA + GKKV V ++P ++ V+ +
Sbjct: 293 KVNLIYLGSCTNGRIEDMHIAADIL--RGKKVAKGVRLLVIPNSRYVYHECL------RD 344
Query: 427 GKTCSQIFEEAGCDTPASPSCGACLG 452
G + EAG A P+CG C+G
Sbjct: 345 GTLLT--LAEAGAMIEA-PNCGPCMG 367
>gi|325271648|ref|ZP_08138149.1| isopropylmalate isomerase large subunit [Pseudomonas sp. TJI-51]
gi|324103220|gb|EGC00566.1| isopropylmalate isomerase large subunit [Pseudomonas sp. TJI-51]
Length = 477
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 73/434 (16%)
Query: 70 TLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIV 129
TL +K++ A E + G ++ + +D + H+V P +F + N K W + +
Sbjct: 5 TLYDKLWE-AHEVKRRDDGSSL-IYIDRHIIHEVTSPQAFEGLRLA---NRKPWRIDANI 59
Query: 130 IIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKD---LGNFKANPDYKGVCHIALA 186
PDH + T+ ER ++ + D ++ + D + FK N + +G+ H+
Sbjct: 60 ATPDHNVPTTPERKG-GIEAIVDQVSRLQVQTLDENCDEYGIVEFKMNDERQGIVHVISP 118
Query: 187 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGE 246
++G PG ++ DSHT T GAFG A GIG ++ VL T ++ K + ++GE
Sbjct: 119 EQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMLVRVEGE 178
Query: 247 MPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVV 306
+P + AKD++L +IG+I AG +MEF G+ + LSME RMT+CNM +EAG + G+V
Sbjct: 179 LPAGVTAKDIVLAVIGKIGTAGGNGHAMEFAGSAIRALSMEGRMTICNMSIEAGARVGLV 238
Query: 307 PADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHS 355
D TT Y+E + P ++ + SD+ A F + D S+++P V+ S
Sbjct: 239 ATDATTVAYVEGRPYAPKGEQWKQAVEAWKDLVSDDDAVFDTVVELDASQIKPQVSWGTS 298
Query: 356 PD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTE 384
P+ RAL + D+K+DRV+IGSCT + E
Sbjct: 299 PEMVLAVDQRVPDPAAEADLVKRGSIERALKYMGLTANQAITDIKLDRVFIGSCTNSRIE 358
Query: 385 DFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEA 437
D AAA++ A G+K V A+ K + VPGSG + +IF EA
Sbjct: 359 DLRAAAEI--AKGRK-------VAASVK-----QAIVVPGSGLVKAQAEREGLDKIFLEA 404
Query: 438 GCDTPASPSCGACL 451
G + P C CL
Sbjct: 405 GFEW-REPGCSMCL 417
>gi|319780747|ref|YP_004140223.1| 3-isopropylmalate dehydratase large subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317166635|gb|ADV10173.1| 3-isopropylmalate dehydratase, large subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 469
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 186/408 (45%), Gaps = 73/408 (17%)
Query: 95 VDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFC 154
+D + H+V P +F + KV EK + + DH + TS ER I +
Sbjct: 29 IDRHLVHEVTSPQAFEGLRMT---GRKVRHPEKTLAVVDHNVSTSPER---KFGIKNEES 82
Query: 155 MEQNIKYFYDIKDLG--NFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQ 212
Q + KD G + N +G+ HI ++G PG ++ DSHT T GAFG
Sbjct: 83 RIQVEALAKNAKDFGVEYYSENDIRQGIVHIIGPEQGFTLPGMTIVCGDSHTSTHGAFGA 142
Query: 213 FATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYK 272
A GIG ++ VL T ++ + + +DG++P+ + AKD+IL IIGEI AG T
Sbjct: 143 LAHGIGTSEVEHVLATQTLIQRKAKNMLVRVDGQLPEGVTAKDIILAIIGEIGTAGGTGY 202
Query: 273 SMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------- 323
+E+ G + LSME RMT+CNM +E G + G++ AD TTF Y++DK P
Sbjct: 203 VIEYAGEAIRALSMEGRMTICNMSIEGGARAGLIAADETTFAYVKDKPRAPKGAAWDAAL 262
Query: 324 --YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN----------------------- 358
++ + SDE A F D +KL P+V+ SP++
Sbjct: 263 EYWKTLQSDEGAHFDKVIVLDAAKLPPIVSWGSSPEDVVSVQGIVPNPDDITDENKRTSK 322
Query: 359 -RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPAT 410
RAL D+ +DRV+IGSCT G+ ED A AKV GK V
Sbjct: 323 QRALDYMGLTPGTRITDITLDRVFIGSCTNGRIEDLRAVAKVV--EGKTVS--------- 371
Query: 411 QKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACL 451
V + VPGSG + +IF AG D P C CL
Sbjct: 372 ----PHVDAMIVPGSGLVKEQAEAEGLDKIFVAAGFDW-REPGCSMCL 414
>gi|169351397|ref|ZP_02868335.1| hypothetical protein CLOSPI_02177 [Clostridium spiroforme DSM 1552]
gi|169291619|gb|EDS73752.1| putative aconitate hydratase [Clostridium spiroforme DSM 1552]
Length = 647
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 186/388 (47%), Gaps = 30/388 (7%)
Query: 68 AMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREK 127
M L KI + ++ +L PG+ + + +D +T D G ++ + N K EK
Sbjct: 8 GMNLAYKILNSKLKEGKLIPGEQIGIQIDQTLTQDSTGTMAYLQLE---AMNIKHVAVEK 64
Query: 128 IVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQ 187
V DH + + + + +R + I + GN GVCH L
Sbjct: 65 AVAYIDHNMLQTGFENMDDHEFIRSVAKKHGIVF----SKPGN--------GVCH-QLQL 111
Query: 188 EGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEM 247
E +PG+ L+G+DSHT T GA G A G G D + TGK L+ P ++ L G+
Sbjct: 112 ENFAKPGKTLVGSDSHTPTCGAMGMIAIGAGGLDVAVAMATGKYYLQCPSVVKVNLVGKK 171
Query: 248 PDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGKNGVVP 307
++ AKD+IL I+ +++V G K +E+ G + LS+ +R T+CNM E G + P
Sbjct: 172 APWVSAKDIILYILQQLTVKGGVNKIIEYTGKGIASLSLTDRATICNMGAELGATTSIFP 231
Query: 308 ADGTTFKYLEDKTSLP-YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECK 366
D T +YL+ + + Y + +DE A++ E D+S L P+ AKPHSPD +E +
Sbjct: 232 TDKRTKEYLQQQGRVEDYIEIKADEDATYDQELTVDLSTLVPMTAKPHSPDAVVPVKELE 291
Query: 367 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPG 424
+KI++V IGSCT D + AAK+ G+KV V + P + + + G
Sbjct: 292 GMKINQVVIGSCTNSSFADMMKAAKIL--KGRKVAEHVSLVIAPGSSSILAMLAKNGALG 349
Query: 425 SGGKTCSQIFEEAGCDTPASPSCGACLG 452
+ ++I E C CG C+G
Sbjct: 350 DMVQAGARILE---C------GCGPCIG 368
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,809,469,422
Number of Sequences: 23463169
Number of extensions: 343686276
Number of successful extensions: 771274
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8760
Number of HSP's successfully gapped in prelim test: 1842
Number of HSP's that attempted gapping in prelim test: 749272
Number of HSP's gapped (non-prelim): 12916
length of query: 473
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 327
effective length of database: 8,933,572,693
effective search space: 2921278270611
effective search space used: 2921278270611
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)