Query 012014
Match_columns 473
No_of_seqs 619 out of 3386
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 07:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012014.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012014hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 8.1E-54 1.8E-58 410.1 24.5 290 131-454 61-354 (361)
2 KOG0581 Mitogen-activated prot 100.0 8.9E-53 1.9E-57 380.4 17.4 253 145-447 79-334 (364)
3 KOG0192 Tyrosine kinase specif 100.0 5.4E-52 1.2E-56 394.3 21.9 265 143-458 39-309 (362)
4 KOG0615 Serine/threonine prote 100.0 5.5E-52 1.2E-56 377.8 15.2 252 144-447 171-436 (475)
5 KOG0575 Polo-like serine/threo 100.0 1.5E-51 3.2E-56 393.5 18.7 247 145-447 18-268 (592)
6 KOG0591 NIMA (never in mitosis 100.0 3.7E-52 8E-57 361.0 7.8 263 144-451 18-284 (375)
7 KOG0595 Serine/threonine-prote 100.0 8.8E-51 1.9E-55 370.5 16.5 201 143-363 8-217 (429)
8 KOG0197 Tyrosine kinases [Sign 100.0 8.8E-51 1.9E-55 384.3 15.8 262 140-454 201-463 (468)
9 KOG0598 Ribosomal protein S6 k 100.0 2.4E-49 5.2E-54 358.0 16.3 244 143-441 23-270 (357)
10 KOG0592 3-phosphoinositide-dep 100.0 1.5E-48 3.3E-53 366.9 15.3 253 141-447 69-337 (604)
11 KOG0198 MEKK and related serin 100.0 9.2E-48 2E-52 354.2 17.6 261 144-452 16-280 (313)
12 KOG0593 Predicted protein kina 100.0 4.9E-48 1.1E-52 338.6 13.5 276 145-447 2-283 (396)
13 KOG0582 Ste20-like serine/thre 100.0 4.9E-47 1.1E-51 348.8 18.5 266 140-447 21-292 (516)
14 KOG0661 MAPK related serine/th 100.0 3.6E-48 7.7E-53 358.9 10.8 279 144-448 9-291 (538)
15 KOG0578 p21-activated serine/t 100.0 7.7E-47 1.7E-51 358.4 17.9 250 144-447 272-522 (550)
16 KOG0193 Serine/threonine prote 100.0 2.1E-47 4.5E-52 363.5 13.8 270 135-455 382-656 (678)
17 KOG1026 Nerve growth factor re 100.0 8.8E-48 1.9E-52 381.5 11.7 275 137-455 478-765 (774)
18 KOG0600 Cdc2-related protein k 100.0 1.5E-46 3.3E-51 350.6 17.0 280 144-447 116-399 (560)
19 KOG0659 Cdk activating kinase 100.0 4.8E-46 1E-50 320.7 18.2 276 145-448 2-281 (318)
20 KOG0583 Serine/threonine prote 100.0 8.7E-46 1.9E-50 355.4 21.3 256 142-454 14-280 (370)
21 KOG0605 NDR and related serine 100.0 2E-46 4.4E-51 352.8 16.2 249 142-441 138-435 (550)
22 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.1E-46 1.5E-50 359.2 20.5 270 143-454 5-336 (338)
23 KOG0616 cAMP-dependent protein 100.0 1.9E-46 4.2E-51 327.9 14.6 198 144-363 43-244 (355)
24 KOG4721 Serine/threonine prote 100.0 1.2E-46 2.7E-51 354.5 9.9 257 142-461 121-377 (904)
25 KOG0597 Serine-threonine prote 100.0 3.3E-46 7.2E-51 351.7 11.1 246 145-447 2-250 (808)
26 KOG0201 Serine/threonine prote 100.0 2.2E-46 4.8E-51 344.3 8.6 249 144-447 12-262 (467)
27 KOG0585 Ca2+/calmodulin-depend 100.0 2E-45 4.3E-50 340.4 13.9 261 142-452 94-376 (576)
28 PHA02988 hypothetical protein; 100.0 3.5E-44 7.5E-49 338.0 22.7 251 150-454 25-281 (283)
29 KOG0660 Mitogen-activated prot 100.0 4.1E-45 8.9E-50 329.3 14.1 290 139-447 16-309 (359)
30 KOG0694 Serine/threonine prote 100.0 4.3E-45 9.4E-50 353.2 15.0 244 142-442 365-613 (694)
31 KOG0588 Serine/threonine prote 100.0 6E-45 1.3E-49 349.7 14.5 248 144-448 11-263 (786)
32 KOG1095 Protein tyrosine kinas 100.0 5.9E-45 1.3E-49 374.1 15.2 278 144-467 691-976 (1025)
33 KOG0611 Predicted serine/threo 100.0 9.3E-45 2E-49 329.4 14.3 248 143-448 51-303 (668)
34 KOG0663 Protein kinase PITSLRE 100.0 1.7E-44 3.6E-49 320.5 15.4 278 144-447 75-360 (419)
35 KOG0658 Glycogen synthase kina 100.0 5.4E-45 1.2E-49 329.1 10.9 285 146-454 25-314 (364)
36 cd05104 PTKc_Kit Catalytic dom 100.0 9.5E-44 2.1E-48 348.1 20.7 268 142-452 32-374 (375)
37 KOG0194 Protein tyrosine kinas 100.0 8.9E-45 1.9E-49 349.2 13.1 270 136-458 148-426 (474)
38 cd05106 PTKc_CSF-1R Catalytic 100.0 8.7E-44 1.9E-48 348.0 20.1 269 141-452 34-372 (374)
39 KOG0580 Serine/threonine prote 100.0 1.2E-44 2.6E-49 307.6 12.0 249 143-447 20-272 (281)
40 cd05096 PTKc_DDR1 Catalytic do 100.0 1.7E-43 3.7E-48 337.4 20.9 270 144-450 4-303 (304)
41 cd05631 STKc_GRK4 Catalytic do 100.0 3.5E-43 7.6E-48 332.0 21.8 251 146-447 1-260 (285)
42 KOG0589 Serine/threonine prote 100.0 4.7E-44 1E-48 337.7 15.1 252 145-448 4-258 (426)
43 cd05612 STKc_PRKX_like Catalyt 100.0 5E-44 1.1E-48 338.7 14.9 245 145-448 1-254 (291)
44 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.9E-43 4.1E-48 342.4 19.3 280 146-448 1-290 (338)
45 KOG2345 Serine/threonine prote 100.0 3.9E-44 8.5E-49 305.9 12.6 271 141-452 17-300 (302)
46 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4E-43 8.7E-48 334.6 20.9 280 143-447 3-287 (303)
47 PHA03212 serine/threonine kina 100.0 1.2E-42 2.6E-47 341.0 24.4 276 144-447 91-375 (391)
48 cd07862 STKc_CDK6 Catalytic do 100.0 7.2E-43 1.6E-47 330.9 21.9 279 145-447 1-286 (290)
49 PTZ00263 protein kinase A cata 100.0 1.1E-43 2.3E-48 342.2 15.4 245 144-447 17-270 (329)
50 cd07848 STKc_CDKL5 Catalytic d 100.0 9.2E-43 2E-47 329.6 21.5 278 145-447 1-283 (287)
51 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-43 3.2E-48 340.4 16.1 241 151-447 1-250 (323)
52 KOG0033 Ca2+/calmodulin-depend 100.0 2E-45 4.3E-50 313.0 2.4 250 144-446 10-265 (355)
53 cd05048 PTKc_Ror Catalytic Dom 100.0 8E-43 1.7E-47 329.4 20.3 263 145-451 5-282 (283)
54 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.2E-43 9.1E-48 338.9 18.5 253 145-448 1-257 (333)
55 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-42 2.8E-47 335.0 21.3 199 144-363 4-205 (331)
56 KOG4257 Focal adhesion tyrosin 100.0 1.8E-43 3.9E-48 336.4 15.0 253 148-454 392-651 (974)
57 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-42 2.5E-47 341.4 21.2 271 140-453 32-398 (400)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-42 4.3E-47 327.3 22.1 277 144-447 4-284 (288)
59 PTZ00283 serine/threonine prot 100.0 1.1E-42 2.4E-47 350.7 21.5 264 141-448 28-297 (496)
60 cd05108 PTKc_EGFR Catalytic do 100.0 1.9E-42 4.2E-47 331.9 22.0 259 144-455 6-271 (316)
61 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-42 3.7E-47 324.0 20.5 256 144-452 4-265 (266)
62 KOG1989 ARK protein kinase fam 100.0 4.2E-43 9.2E-48 349.8 16.9 266 143-455 35-314 (738)
63 PTZ00267 NIMA-related protein 100.0 4.4E-43 9.5E-48 353.5 17.3 253 146-447 68-322 (478)
64 cd05585 STKc_YPK1_like Catalyt 100.0 3.5E-43 7.7E-48 336.2 15.4 236 153-444 1-240 (312)
65 cd05054 PTKc_VEGFR Catalytic d 100.0 1.9E-42 4.1E-47 334.1 20.4 270 143-454 5-335 (337)
66 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-42 3.2E-47 313.9 18.3 283 145-448 11-302 (323)
67 cd05093 PTKc_TrkB Catalytic do 100.0 3.1E-42 6.7E-47 326.1 21.0 268 144-455 4-282 (288)
68 PTZ00426 cAMP-dependent protei 100.0 4.9E-43 1.1E-47 338.2 15.5 246 143-447 28-283 (340)
69 cd05593 STKc_PKB_gamma Catalyt 100.0 9.6E-43 2.1E-47 335.2 17.4 242 151-448 1-251 (328)
70 cd05595 STKc_PKB_beta Catalyti 100.0 6.9E-43 1.5E-47 335.6 16.4 241 151-447 1-250 (323)
71 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-42 3.3E-47 323.5 17.8 256 143-451 4-260 (261)
72 cd05049 PTKc_Trk Catalytic dom 100.0 3.9E-42 8.4E-47 324.2 20.5 263 144-450 4-279 (280)
73 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.5E-43 2.1E-47 324.8 15.7 257 143-452 4-261 (261)
74 PF07714 Pkinase_Tyr: Protein 100.0 8.7E-43 1.9E-47 324.4 15.2 250 149-449 3-259 (259)
75 cd05094 PTKc_TrkC Catalytic do 100.0 6.8E-42 1.5E-46 324.3 21.5 267 145-455 5-285 (291)
76 cd05114 PTKc_Tec_Rlk Catalytic 100.0 9E-42 2E-46 317.3 22.0 251 145-449 4-255 (256)
77 cd05111 PTK_HER3 Pseudokinase 100.0 9.4E-42 2E-46 321.2 22.0 257 145-454 7-270 (279)
78 cd05062 PTKc_IGF-1R Catalytic 100.0 5E-42 1.1E-46 322.9 20.0 265 142-450 3-276 (277)
79 cd05052 PTKc_Abl Catalytic dom 100.0 1.2E-41 2.5E-46 317.9 22.0 256 144-452 5-262 (263)
80 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-42 1.1E-46 322.2 19.6 264 147-452 1-272 (273)
81 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-41 2.6E-46 318.5 22.0 261 145-453 2-266 (267)
82 cd05626 STKc_LATS2 Catalytic d 100.0 3.2E-42 7E-47 338.5 18.8 201 146-363 2-251 (381)
83 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4E-42 8.6E-47 324.6 18.5 272 145-453 3-282 (283)
84 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.5E-42 1.2E-46 323.8 19.4 275 144-452 3-283 (284)
85 cd05068 PTKc_Frk_like Catalyti 100.0 4.9E-42 1.1E-46 320.0 18.8 257 143-452 4-261 (261)
86 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-41 3E-46 325.9 22.3 252 142-447 32-292 (382)
87 PLN00034 mitogen-activated pro 100.0 4.8E-42 1E-46 334.0 19.5 249 144-448 73-328 (353)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 8.6E-42 1.9E-46 329.3 20.8 199 144-363 4-205 (333)
89 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-41 2.9E-46 321.0 21.5 263 145-451 5-282 (283)
90 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-42 3.4E-47 339.2 15.7 202 145-363 1-242 (364)
91 cd05033 PTKc_EphR Catalytic do 100.0 6E-42 1.3E-46 320.4 18.8 257 144-452 3-265 (266)
92 KOG0610 Putative serine/threon 100.0 4E-42 8.7E-47 313.9 16.9 254 143-446 75-390 (459)
93 PTZ00036 glycogen synthase kin 100.0 5.9E-42 1.3E-46 341.4 19.7 287 143-453 64-358 (440)
94 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-42 6.3E-47 331.7 16.9 244 147-447 1-256 (324)
95 cd05596 STKc_ROCK Catalytic do 100.0 4E-42 8.6E-47 336.0 18.0 255 142-448 40-304 (370)
96 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-41 4E-46 320.9 21.9 278 146-447 1-284 (288)
97 cd05628 STKc_NDR1 Catalytic do 100.0 7.7E-42 1.7E-46 333.8 19.7 202 145-363 1-239 (363)
98 cd05573 STKc_ROCK_NDR_like Cat 100.0 3E-42 6.4E-47 335.6 16.7 253 145-448 1-285 (350)
99 KOG0599 Phosphorylase kinase g 100.0 6.2E-43 1.3E-47 302.3 10.3 252 144-448 16-283 (411)
100 KOG0603 Ribosomal protein S6 k 100.0 6.1E-42 1.3E-46 329.6 18.1 240 143-447 320-562 (612)
101 cd05629 STKc_NDR_like_fungal C 100.0 4.4E-42 9.5E-47 337.4 17.5 202 145-363 1-251 (377)
102 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-42 3.6E-47 333.5 14.2 241 151-447 1-251 (325)
103 KOG4278 Protein tyrosine kinas 100.0 1.1E-42 2.4E-47 330.7 12.6 266 135-453 257-524 (1157)
104 cd05584 STKc_p70S6K Catalytic 100.0 4.5E-42 9.7E-47 330.1 17.0 241 151-447 2-255 (323)
105 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-43 3.9E-48 344.5 7.3 259 144-455 628-894 (996)
106 cd05075 PTKc_Axl Catalytic dom 100.0 3.1E-41 6.7E-46 316.6 22.3 264 147-452 1-271 (272)
107 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-41 4.5E-46 319.0 21.1 260 144-456 6-272 (279)
108 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-41 2.8E-46 328.4 19.9 251 146-447 1-266 (332)
109 KOG1094 Discoidin domain recep 100.0 1.5E-42 3.3E-47 328.0 13.0 264 145-452 538-804 (807)
110 cd05605 STKc_GRK4_like Catalyt 100.0 1.9E-41 4.2E-46 320.1 20.6 251 146-447 1-260 (285)
111 cd06646 STKc_MAP4K5 Catalytic 100.0 9.9E-42 2.1E-46 319.1 18.4 254 144-448 8-265 (267)
112 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2E-41 4.4E-46 314.9 20.2 252 145-450 4-256 (256)
113 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.3E-41 5E-46 332.0 21.6 270 140-452 32-399 (401)
114 cd05053 PTKc_FGFR Catalytic do 100.0 6.6E-42 1.4E-46 324.8 17.2 269 141-453 8-292 (293)
115 cd05587 STKc_cPKC Catalytic do 100.0 6E-42 1.3E-46 329.5 17.1 241 146-442 1-246 (324)
116 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-41 4.1E-46 319.5 20.1 269 143-455 4-279 (280)
117 cd05590 STKc_nPKC_eta Catalyti 100.0 4.8E-42 1E-46 329.3 16.0 238 151-444 1-243 (320)
118 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-41 4E-46 326.5 20.1 193 151-362 1-198 (329)
119 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-41 2.3E-46 332.6 18.7 203 142-363 40-250 (370)
120 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-41 3E-46 324.7 19.1 270 142-455 15-302 (307)
121 cd05071 PTKc_Src Catalytic dom 100.0 2.4E-41 5.1E-46 315.5 20.2 255 144-452 5-260 (262)
122 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-41 3.6E-46 316.3 19.1 254 144-451 5-259 (260)
123 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-41 4.4E-46 319.8 19.8 263 145-451 5-282 (283)
124 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-41 7.1E-46 317.2 21.1 246 153-448 1-250 (277)
125 cd05618 STKc_aPKC_iota Catalyt 100.0 1.9E-41 4.2E-46 326.3 19.9 193 151-362 1-198 (329)
126 cd05055 PTKc_PDGFR Catalytic d 100.0 2.3E-41 5E-46 322.1 20.2 260 143-452 33-301 (302)
127 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-41 3.1E-46 331.6 19.0 286 143-448 19-315 (359)
128 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-41 3.2E-46 325.4 18.6 240 151-446 1-246 (316)
129 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.9E-41 6.3E-46 327.1 20.9 270 143-454 5-341 (343)
130 cd05591 STKc_nPKC_epsilon Cata 100.0 9.7E-42 2.1E-46 327.6 17.3 242 151-448 1-254 (321)
131 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-40 3.4E-45 310.9 24.9 261 145-453 2-266 (267)
132 cd05598 STKc_LATS Catalytic do 100.0 5.4E-42 1.2E-46 336.7 15.6 202 145-363 1-247 (376)
133 cd05625 STKc_LATS1 Catalytic d 100.0 7.6E-42 1.6E-46 336.3 16.4 201 146-363 2-251 (382)
134 cd05601 STKc_CRIK Catalytic do 100.0 5.3E-42 1.1E-46 330.9 15.0 252 145-447 1-262 (330)
135 cd05084 PTKc_Fes Catalytic dom 100.0 4.7E-41 1E-45 311.8 20.7 248 151-450 1-251 (252)
136 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.2E-41 4.7E-46 322.9 18.6 270 142-455 12-299 (304)
137 KOG0667 Dual-specificity tyros 100.0 9.7E-42 2.1E-46 329.9 16.2 279 146-447 187-501 (586)
138 PHA03207 serine/threonine kina 100.0 5.1E-41 1.1E-45 331.0 21.7 278 144-448 91-375 (392)
139 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-41 2.4E-46 327.5 16.4 241 146-442 1-246 (323)
140 cd05045 PTKc_RET Catalytic dom 100.0 8.5E-41 1.8E-45 316.7 22.3 265 146-454 1-288 (290)
141 cd07853 STKc_NLK Catalytic dom 100.0 2.2E-41 4.7E-46 331.9 18.8 284 146-448 1-288 (372)
142 cd08229 STKc_Nek7 Catalytic do 100.0 6.4E-41 1.4E-45 313.6 20.9 260 145-452 2-265 (267)
143 cd05061 PTKc_InsR Catalytic do 100.0 5.7E-41 1.2E-45 317.5 20.7 267 142-452 3-278 (288)
144 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-41 3E-46 331.3 17.0 287 143-448 15-311 (355)
145 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-41 4E-46 319.0 17.2 262 143-450 4-276 (277)
146 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.5E-41 1.2E-45 320.8 20.7 280 145-453 6-293 (309)
147 PHA03211 serine/threonine kina 100.0 9.1E-41 2E-45 331.6 22.9 279 143-447 167-454 (461)
148 cd07868 STKc_CDK8 Catalytic do 100.0 9.3E-41 2E-45 320.5 22.1 205 150-363 6-219 (317)
149 PRK13184 pknD serine/threonine 100.0 6.4E-41 1.4E-45 346.9 22.4 268 145-454 2-292 (932)
150 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-42 7.6E-47 330.3 12.2 238 151-444 2-245 (318)
151 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-41 4.9E-46 323.9 17.7 240 151-446 1-246 (316)
152 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-40 2.4E-45 319.4 22.5 272 143-458 10-299 (314)
153 cd05082 PTKc_Csk Catalytic dom 100.0 7.9E-41 1.7E-45 311.0 20.9 251 144-452 5-256 (256)
154 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-41 3.4E-46 325.6 16.6 241 151-447 1-251 (318)
155 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-40 2.4E-45 310.7 21.9 255 143-451 4-259 (260)
156 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-41 3E-46 320.3 15.9 262 145-450 5-279 (280)
157 cd05620 STKc_nPKC_delta Cataly 100.0 2.5E-41 5.5E-46 323.7 17.9 240 151-446 1-246 (316)
158 KOG4279 Serine/threonine prote 100.0 4E-42 8.7E-47 330.7 12.2 246 152-447 582-831 (1226)
159 cd06654 STKc_PAK1 Catalytic do 100.0 7.2E-41 1.6E-45 317.9 20.7 250 144-447 19-269 (296)
160 cd05097 PTKc_DDR_like Catalyti 100.0 5.5E-41 1.2E-45 318.7 19.9 270 144-450 4-294 (295)
161 cd05032 PTKc_InsR_like Catalyt 100.0 6.4E-41 1.4E-45 315.4 20.1 264 143-450 4-276 (277)
162 cd05089 PTKc_Tie1 Catalytic do 100.0 4.3E-41 9.4E-46 319.7 19.0 267 145-458 2-281 (297)
163 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-40 2.6E-45 310.0 21.5 246 152-451 2-254 (257)
164 cd06625 STKc_MEKK3_like Cataly 100.0 1.3E-40 2.8E-45 310.8 21.8 251 145-447 2-259 (263)
165 cd05608 STKc_GRK1 Catalytic do 100.0 7.1E-41 1.5E-45 315.4 20.2 247 153-447 1-256 (280)
166 cd06645 STKc_MAP4K3 Catalytic 100.0 3.8E-41 8.2E-46 315.2 18.2 253 144-447 8-264 (267)
167 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-40 2.6E-45 309.8 21.3 251 145-449 4-255 (256)
168 cd05622 STKc_ROCK1 Catalytic d 100.0 3.3E-41 7.1E-46 329.5 18.3 205 139-362 37-249 (371)
169 cd07875 STKc_JNK1 Catalytic do 100.0 3.5E-41 7.6E-46 329.5 18.3 286 143-447 22-317 (364)
170 cd06637 STKc_TNIK Catalytic do 100.0 7.3E-41 1.6E-45 314.1 19.8 258 142-447 3-268 (272)
171 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-40 3.1E-45 314.2 21.8 273 145-452 4-283 (284)
172 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-41 2.5E-46 327.4 14.5 237 151-443 1-242 (323)
173 PTZ00284 protein kinase; Provi 100.0 9.2E-41 2E-45 336.6 21.6 203 139-364 123-349 (467)
174 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-40 3.2E-45 315.9 21.4 270 144-450 4-295 (296)
175 cd05115 PTKc_Zap-70 Catalytic 100.0 1.6E-40 3.4E-45 309.0 21.1 248 152-452 2-255 (257)
176 cd05088 PTKc_Tie2 Catalytic do 100.0 4.7E-41 1E-45 320.2 17.7 267 144-457 6-285 (303)
177 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-40 3.3E-45 311.4 20.5 256 151-450 1-268 (269)
178 cd08219 STKc_Nek3 Catalytic do 100.0 1.8E-40 3.8E-45 308.4 20.7 250 146-448 1-252 (255)
179 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.9E-41 2.1E-45 321.2 19.5 243 151-443 1-249 (327)
180 cd05069 PTKc_Yes Catalytic dom 100.0 2.4E-40 5.2E-45 308.5 21.5 254 144-451 5-259 (260)
181 cd05039 PTKc_Csk_like Catalyti 100.0 3.2E-40 6.8E-45 306.9 22.1 251 144-452 5-256 (256)
182 cd05602 STKc_SGK1 Catalytic do 100.0 2E-41 4.4E-46 325.9 14.6 240 151-446 1-245 (325)
183 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-40 2.4E-45 316.9 19.4 270 144-450 4-295 (296)
184 cd05615 STKc_cPKC_alpha Cataly 100.0 4.2E-41 9.1E-46 323.2 16.6 242 146-443 1-247 (323)
185 cd08529 STKc_FA2-like Catalyti 100.0 2.6E-40 5.6E-45 307.4 21.4 249 146-447 1-252 (256)
186 KOG0574 STE20-like serine/thre 100.0 4.5E-43 9.7E-48 307.0 2.3 248 146-447 34-282 (502)
187 cd05604 STKc_SGK3 Catalytic do 100.0 1.7E-41 3.6E-46 326.5 13.5 240 151-446 1-245 (325)
188 cd05050 PTKc_Musk Catalytic do 100.0 1.6E-40 3.6E-45 314.4 20.0 264 143-450 3-287 (288)
189 cd05630 STKc_GRK6 Catalytic do 100.0 2.9E-40 6.2E-45 312.0 21.5 251 146-447 1-260 (285)
190 cd06638 STKc_myosinIIIA Cataly 100.0 2.3E-40 5E-45 313.1 20.9 268 136-448 9-283 (286)
191 cd06613 STKc_MAP4K3_like Catal 100.0 2.6E-40 5.7E-45 308.5 20.9 254 144-447 2-259 (262)
192 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-40 3.8E-45 322.1 20.3 281 143-448 13-298 (343)
193 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-40 2.6E-45 310.7 18.3 256 143-451 4-260 (261)
194 cd05627 STKc_NDR2 Catalytic do 100.0 3.3E-41 7.2E-46 329.1 15.1 202 145-363 1-239 (360)
195 cd06655 STKc_PAK2 Catalytic do 100.0 2.7E-40 5.8E-45 313.9 20.7 250 144-447 18-268 (296)
196 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-40 3.2E-45 311.3 18.7 257 144-452 4-267 (268)
197 cd06624 STKc_ASK Catalytic dom 100.0 4.3E-40 9.3E-45 308.2 21.8 258 140-447 3-264 (268)
198 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-40 2.8E-45 311.9 18.2 256 145-452 4-268 (269)
199 cd05110 PTKc_HER4 Catalytic do 100.0 3E-40 6.6E-45 314.7 21.0 259 144-455 6-271 (303)
200 cd05060 PTKc_Syk_like Catalyti 100.0 4.3E-40 9.3E-45 306.2 21.5 248 151-452 1-255 (257)
201 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-40 7E-45 316.8 21.3 205 150-363 6-219 (317)
202 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.7E-40 5.8E-45 312.2 20.3 273 145-452 4-283 (284)
203 cd06656 STKc_PAK3 Catalytic do 100.0 2.1E-40 4.6E-45 314.8 19.6 250 144-447 18-268 (297)
204 cd06631 STKc_YSK4 Catalytic do 100.0 5E-40 1.1E-44 307.2 21.8 250 146-447 1-261 (265)
205 cd05632 STKc_GRK5 Catalytic do 100.0 3E-40 6.4E-45 312.0 20.4 250 147-447 2-260 (285)
206 cd05056 PTKc_FAK Catalytic dom 100.0 2.1E-40 4.6E-45 310.6 19.3 256 145-454 6-267 (270)
207 cd05603 STKc_SGK2 Catalytic do 100.0 4.1E-41 9E-46 323.3 14.8 237 151-443 1-242 (321)
208 PTZ00266 NIMA-related protein 100.0 1.1E-40 2.3E-45 346.6 18.6 263 138-447 6-294 (1021)
209 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.8E-40 1E-44 317.7 22.0 268 143-454 10-295 (334)
210 cd00192 PTKc Catalytic domain 100.0 6.6E-40 1.4E-44 305.5 22.1 256 151-450 1-262 (262)
211 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-40 1E-44 314.1 21.4 198 145-363 1-201 (308)
212 cd05085 PTKc_Fer Catalytic dom 100.0 6E-40 1.3E-44 303.9 21.4 247 151-450 1-249 (250)
213 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.7E-40 5.9E-45 314.9 19.5 289 144-458 5-298 (301)
214 cd06619 PKc_MKK5 Catalytic dom 100.0 6.7E-40 1.4E-44 308.7 21.8 249 145-448 1-253 (279)
215 cd05597 STKc_DMPK_like Catalyt 100.0 2E-40 4.4E-45 319.6 18.7 201 145-362 1-210 (331)
216 cd05057 PTKc_EGFR_like Catalyt 100.0 8.9E-40 1.9E-44 307.9 22.4 257 145-454 7-270 (279)
217 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.9E-40 2.1E-44 305.5 22.1 249 146-447 1-263 (267)
218 cd05058 PTKc_Met_Ron Catalytic 100.0 5.1E-40 1.1E-44 306.6 20.0 253 151-454 1-261 (262)
219 cd05042 PTKc_Aatyk Catalytic d 100.0 4.7E-40 1E-44 308.1 19.8 255 151-449 1-267 (269)
220 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.1E-40 1.1E-44 306.5 19.9 240 151-450 1-262 (262)
221 cd05073 PTKc_Hck Catalytic dom 100.0 1.1E-39 2.3E-44 304.1 22.0 255 143-451 4-259 (260)
222 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-40 5.2E-45 309.7 17.5 257 144-452 3-266 (267)
223 PF00069 Pkinase: Protein kina 100.0 1.7E-40 3.7E-45 309.4 16.3 252 147-447 1-256 (260)
224 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-39 2.6E-44 308.0 22.2 277 146-447 1-281 (285)
225 cd05040 PTKc_Ack_like Catalyti 100.0 5.6E-40 1.2E-44 305.4 19.6 249 151-450 1-256 (257)
226 cd05047 PTKc_Tie Catalytic dom 100.0 1.1E-39 2.4E-44 305.7 21.7 256 151-453 1-269 (270)
227 cd06643 STKc_SLK Catalytic dom 100.0 5.1E-40 1.1E-44 310.0 19.4 249 147-447 7-261 (282)
228 cd08223 STKc_Nek4 Catalytic do 100.0 1.6E-39 3.4E-44 302.4 22.3 250 146-447 1-253 (257)
229 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.4E-40 9.5E-45 308.9 18.6 238 152-449 2-273 (274)
230 cd06639 STKc_myosinIIIB Cataly 100.0 1E-39 2.2E-44 309.5 21.2 266 137-447 14-286 (291)
231 cd06611 STKc_SLK_like Catalyti 100.0 3.2E-40 6.9E-45 311.1 17.6 254 143-448 3-262 (280)
232 cd05624 STKc_MRCK_beta Catalyt 100.0 2.4E-40 5.1E-45 319.1 16.9 201 145-362 1-210 (331)
233 cd05112 PTKc_Itk Catalytic dom 100.0 1.5E-39 3.3E-44 302.3 21.8 252 144-449 3-255 (256)
234 cd06644 STKc_STK10_LOK Catalyt 100.0 9.7E-40 2.1E-44 309.7 20.8 253 143-447 10-268 (292)
235 KOG4717 Serine/threonine prote 100.0 1.8E-40 4E-45 309.6 15.4 248 144-447 17-269 (864)
236 cd08227 PK_STRAD_alpha Pseudok 100.0 3.4E-40 7.4E-45 317.8 17.9 278 149-447 2-306 (327)
237 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-39 3.3E-44 304.1 21.8 252 145-447 2-260 (266)
238 cd06612 STKc_MST1_2 Catalytic 100.0 7.2E-40 1.6E-44 304.4 19.4 250 144-447 2-252 (256)
239 cd08221 STKc_Nek9 Catalytic do 100.0 1.9E-39 4.2E-44 301.6 22.2 250 146-448 1-253 (256)
240 cd05041 PTKc_Fes_like Catalyti 100.0 1.5E-39 3.2E-44 301.4 21.3 248 151-450 1-250 (251)
241 PHA03209 serine/threonine kina 100.0 5.8E-40 1.3E-44 319.5 19.4 191 144-360 65-256 (357)
242 KOG0579 Ste20-like serine/thre 100.0 1.9E-41 4.1E-46 323.0 8.5 252 144-447 31-288 (1187)
243 cd07839 STKc_CDK5 Catalytic do 100.0 6.6E-40 1.4E-44 309.6 19.0 276 146-447 1-280 (284)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.5E-40 1.2E-44 310.1 18.4 264 145-453 5-271 (284)
245 KOG0577 Serine/threonine prote 100.0 2.2E-41 4.8E-46 320.4 8.5 245 145-447 26-277 (948)
246 KOG0584 Serine/threonine prote 100.0 5.5E-41 1.2E-45 321.7 11.2 247 148-447 43-295 (632)
247 cd05623 STKc_MRCK_alpha Cataly 100.0 4.8E-40 1E-44 317.2 17.8 202 145-363 1-211 (332)
248 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-39 2.9E-44 305.5 20.2 254 146-447 2-268 (272)
249 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-39 2.5E-44 307.7 19.7 264 136-447 7-278 (282)
250 cd06609 STKc_MST3_like Catalyt 100.0 2E-39 4.3E-44 304.7 21.2 248 145-447 1-250 (274)
251 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.4E-40 5.1E-45 308.1 14.3 240 151-450 1-258 (258)
252 cd05046 PTK_CCK4 Pseudokinase 100.0 1.5E-39 3.3E-44 305.6 20.0 262 145-450 5-274 (275)
253 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.7E-39 8E-44 304.9 22.5 263 145-447 1-265 (287)
254 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-39 2.6E-44 306.0 19.0 264 147-452 1-272 (273)
255 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-39 3.9E-44 301.5 19.8 247 145-451 6-253 (254)
256 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-39 2.3E-44 315.6 19.0 283 143-448 3-292 (336)
257 cd07847 STKc_CDKL1_4 Catalytic 100.0 2E-39 4.2E-44 306.7 20.3 276 145-447 1-282 (286)
258 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-40 2.3E-45 339.7 12.3 259 143-447 477-870 (1351)
259 KOG0199 ACK and related non-re 100.0 1.2E-40 2.7E-45 320.8 11.7 257 145-453 110-373 (1039)
260 cd06652 STKc_MEKK2 Catalytic d 100.0 2.3E-39 5E-44 302.7 20.0 252 145-447 2-260 (265)
261 PHA02882 putative serine/threo 100.0 1.9E-39 4.2E-44 307.7 19.7 263 144-449 11-293 (294)
262 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-40 1E-44 317.2 15.7 191 153-362 1-199 (330)
263 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-39 2.5E-44 308.9 17.8 249 146-448 23-272 (292)
264 cd05609 STKc_MAST Catalytic do 100.0 2.4E-39 5.2E-44 308.9 20.1 256 145-451 1-273 (305)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.1E-39 6.6E-44 305.4 20.5 252 145-447 1-261 (286)
266 cd05086 PTKc_Aatyk2 Catalytic 100.0 6E-39 1.3E-43 300.4 22.2 254 152-450 2-267 (268)
267 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-39 2.6E-44 305.3 17.5 254 151-450 1-268 (269)
268 cd08218 STKc_Nek1 Catalytic do 100.0 1.3E-39 2.8E-44 302.7 17.6 249 146-447 1-252 (256)
269 KOG0596 Dual specificity; seri 100.0 2.1E-40 4.5E-45 312.2 12.1 254 143-447 359-626 (677)
270 cd06605 PKc_MAPKK Catalytic do 100.0 2.2E-39 4.7E-44 302.8 18.9 253 145-447 1-256 (265)
271 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.5E-39 1.6E-43 303.5 22.8 282 143-447 3-287 (291)
272 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-39 1E-43 300.9 21.0 258 145-447 1-263 (267)
273 cd06640 STKc_MST4 Catalytic do 100.0 3.3E-39 7.2E-44 303.6 19.8 248 145-448 4-253 (277)
274 smart00219 TyrKc Tyrosine kina 100.0 8.1E-39 1.8E-43 297.6 22.2 251 147-449 1-258 (258)
275 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.4E-39 7.4E-44 300.4 19.6 238 151-450 1-259 (259)
276 cd07844 STKc_PCTAIRE_like Cata 100.0 4.9E-39 1.1E-43 304.8 20.9 202 144-364 4-208 (291)
277 cd06608 STKc_myosinIII_like Ca 100.0 3.6E-39 7.8E-44 302.9 19.8 261 142-447 3-271 (275)
278 cd06659 STKc_PAK6 Catalytic do 100.0 3.1E-39 6.7E-44 306.7 19.3 248 147-448 23-271 (297)
279 KOG3653 Transforming growth fa 100.0 9.4E-40 2E-44 302.8 15.2 281 145-457 210-508 (534)
280 KOG0586 Serine/threonine prote 100.0 6.1E-40 1.3E-44 314.2 14.0 250 141-447 52-305 (596)
281 KOG4250 TANK binding protein k 100.0 1.1E-39 2.4E-44 316.6 16.0 208 147-366 15-230 (732)
282 KOG0986 G protein-coupled rece 100.0 1.5E-40 3.3E-45 306.1 9.5 249 144-443 184-436 (591)
283 cd06647 STKc_PAK_I Catalytic d 100.0 4.5E-39 9.8E-44 305.1 19.9 251 144-448 18-269 (293)
284 cd06632 STKc_MEKK1_plant Catal 100.0 7.7E-39 1.7E-43 297.8 20.9 247 146-447 1-254 (258)
285 cd08220 STKc_Nek8 Catalytic do 100.0 1E-38 2.2E-43 296.7 21.7 248 146-447 1-252 (256)
286 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.3E-39 5.1E-44 304.7 17.5 246 146-447 5-252 (277)
287 cd07860 STKc_CDK2_3 Catalytic 100.0 8.7E-39 1.9E-43 302.0 21.1 276 146-447 1-280 (284)
288 KOG0604 MAP kinase-activated p 100.0 5.5E-40 1.2E-44 287.6 11.8 259 141-447 57-321 (400)
289 PLN00113 leucine-rich repeat r 100.0 1.2E-38 2.6E-43 349.4 25.3 262 145-454 690-953 (968)
290 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-38 2.5E-43 305.9 22.1 209 146-365 1-221 (316)
291 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.3E-39 1.8E-43 302.0 20.5 252 145-447 1-260 (283)
292 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.5E-39 5.4E-44 306.0 16.7 276 145-447 1-282 (286)
293 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-38 2.9E-43 300.9 21.7 273 146-447 1-281 (286)
294 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.4E-39 1.2E-43 310.7 19.2 289 143-455 3-300 (337)
295 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-38 2.3E-43 308.4 21.2 284 144-447 4-293 (334)
296 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-38 4.5E-43 296.0 22.4 252 145-448 1-256 (264)
297 cd06626 STKc_MEKK4 Catalytic d 100.0 1.4E-38 3.1E-43 297.1 21.1 252 146-447 1-260 (264)
298 cd05580 STKc_PKA Catalytic dom 100.0 4.3E-39 9.3E-44 304.9 17.8 243 145-446 1-252 (290)
299 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-38 3.1E-43 297.1 21.0 256 146-447 1-261 (265)
300 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-38 3E-43 300.6 21.1 248 146-447 20-268 (285)
301 cd07850 STKc_JNK Catalytic dom 100.0 7.4E-39 1.6E-43 311.7 19.7 286 143-447 14-310 (353)
302 cd05574 STKc_phototropin_like 100.0 9.3E-39 2E-43 306.5 20.1 253 145-447 1-288 (316)
303 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-38 2.5E-43 298.5 20.1 253 146-447 1-263 (268)
304 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-38 4E-43 301.5 21.8 281 145-447 1-290 (295)
305 cd07841 STKc_CDK7 Catalytic do 100.0 1.4E-38 3E-43 302.8 20.7 274 146-447 1-281 (298)
306 cd08528 STKc_Nek10 Catalytic d 100.0 2.1E-38 4.6E-43 296.9 21.4 254 146-450 1-268 (269)
307 PHA03210 serine/threonine kina 100.0 9.8E-39 2.1E-43 323.0 19.7 286 144-447 147-453 (501)
308 cd07833 STKc_CDKL Catalytic do 100.0 1.5E-38 3.1E-43 301.0 19.3 277 145-447 1-284 (288)
309 cd06917 STKc_NAK1_like Catalyt 100.0 2E-38 4.4E-43 298.3 19.9 247 146-447 2-254 (277)
310 cd07865 STKc_CDK9 Catalytic do 100.0 2.8E-38 6E-43 302.4 20.9 209 143-363 10-227 (310)
311 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-40 4E-45 339.5 6.1 256 140-447 1230-1493(1509)
312 cd06641 STKc_MST3 Catalytic do 100.0 5E-38 1.1E-42 295.6 22.1 247 146-448 5-253 (277)
313 cd05578 STKc_Yank1 Catalytic d 100.0 1.5E-38 3.3E-43 295.9 18.3 247 146-446 1-253 (258)
314 cd08225 STKc_Nek5 Catalytic do 100.0 2.9E-38 6.4E-43 293.8 20.1 249 146-447 1-253 (257)
315 KOG0983 Mitogen-activated prot 100.0 1.2E-39 2.7E-44 282.0 9.9 252 144-447 91-348 (391)
316 KOG0690 Serine/threonine prote 100.0 4.9E-40 1.1E-44 290.9 7.4 202 144-364 167-372 (516)
317 cd05633 STKc_GRK3 Catalytic do 100.0 4.4E-38 9.6E-43 296.1 21.2 241 152-447 1-254 (279)
318 KOG0607 MAP kinase-interacting 100.0 2.9E-39 6.3E-44 285.3 11.3 273 135-447 73-360 (463)
319 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-37 2.5E-42 297.6 23.3 248 143-448 13-267 (307)
320 cd07835 STKc_CDK1_like Catalyt 100.0 3.1E-38 6.7E-43 298.0 19.1 275 147-447 1-279 (283)
321 PHA03390 pk1 serine/threonine- 100.0 7.7E-38 1.7E-42 292.5 21.4 244 143-447 12-261 (267)
322 cd07845 STKc_CDK10 Catalytic d 100.0 6.9E-38 1.5E-42 299.5 21.6 281 143-447 5-289 (309)
323 cd07836 STKc_Pho85 Catalytic d 100.0 8.5E-38 1.8E-42 295.2 21.6 274 146-447 1-280 (284)
324 cd06614 STKc_PAK Catalytic dom 100.0 6E-38 1.3E-42 296.5 20.5 253 142-447 16-269 (286)
325 cd07843 STKc_CDC2L1 Catalytic 100.0 5.9E-38 1.3E-42 297.7 20.2 277 145-447 5-289 (293)
326 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.2E-38 1.6E-42 292.4 20.5 252 145-447 2-260 (264)
327 cd06616 PKc_MKK4 Catalytic dom 100.0 1.4E-38 3E-43 301.2 15.7 257 145-448 4-267 (288)
328 cd06657 STKc_PAK4 Catalytic do 100.0 5.3E-38 1.1E-42 297.4 19.5 245 149-447 24-269 (292)
329 KOG2052 Activin A type IB rece 100.0 3.7E-38 8.1E-43 290.1 17.7 272 143-454 209-505 (513)
330 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-37 3.3E-42 289.0 22.0 253 146-447 1-256 (260)
331 cd07831 STKc_MOK Catalytic dom 100.0 1.7E-37 3.8E-42 292.7 22.5 274 147-447 1-278 (282)
332 cd07838 STKc_CDK4_6_like Catal 100.0 2.5E-37 5.5E-42 292.3 23.4 275 147-447 1-283 (287)
333 cd07852 STKc_MAPK15 Catalytic 100.0 3.8E-38 8.2E-43 304.9 18.0 283 143-448 5-295 (337)
334 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.7E-38 1E-42 304.6 18.3 283 144-447 4-299 (342)
335 KOG1025 Epidermal growth facto 100.0 7.8E-39 1.7E-43 313.4 12.1 256 147-455 698-960 (1177)
336 PLN00009 cyclin-dependent kina 100.0 2.3E-37 4.9E-42 293.8 21.9 276 145-447 2-283 (294)
337 cd07834 STKc_MAPK Catalytic do 100.0 7.1E-38 1.5E-42 302.3 18.6 287 146-454 1-297 (330)
338 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-37 3.4E-42 292.3 20.4 241 153-444 1-245 (277)
339 cd07840 STKc_CDK9_like Catalyt 100.0 1.8E-37 4E-42 293.3 21.0 278 147-447 1-283 (287)
340 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.7E-37 3.6E-42 298.8 21.0 281 139-448 4-288 (328)
341 cd05122 PKc_STE Catalytic doma 100.0 3.9E-37 8.5E-42 285.0 22.7 249 146-447 1-250 (253)
342 cd08226 PK_STRAD_beta Pseudoki 100.0 1.5E-37 3.3E-42 299.5 20.5 288 151-455 4-317 (328)
343 cd06635 STKc_TAO1 Catalytic do 100.0 2.1E-37 4.6E-42 297.0 21.2 250 145-452 25-281 (317)
344 cd05572 STKc_cGK_PKG Catalytic 100.0 2.1E-37 4.6E-42 289.0 20.5 242 153-447 1-251 (262)
345 cd08216 PK_STRAD Pseudokinase 100.0 1.4E-37 3E-42 298.1 19.8 279 148-447 5-294 (314)
346 cd05606 STKc_beta_ARK Catalyti 100.0 4.4E-37 9.6E-42 289.2 22.6 241 152-447 1-254 (278)
347 cd07866 STKc_BUR1 Catalytic do 100.0 2E-37 4.2E-42 296.7 20.1 285 144-447 7-307 (311)
348 cd07864 STKc_CDK12 Catalytic d 100.0 2.7E-37 5.9E-42 294.5 20.7 282 143-447 5-298 (302)
349 cd08215 STKc_Nek Catalytic dom 100.0 4.4E-37 9.6E-42 285.7 21.4 251 146-447 1-254 (258)
350 cd05611 STKc_Rim15_like Cataly 100.0 8E-38 1.7E-42 291.5 16.3 243 151-449 2-249 (260)
351 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-37 5.2E-42 299.7 19.9 283 144-454 14-305 (342)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 4E-37 8.7E-42 285.5 20.5 247 146-447 1-250 (254)
353 cd05118 STKc_CMGC Catalytic do 100.0 3.3E-37 7.2E-42 290.9 20.2 275 147-447 1-279 (283)
354 KOG0612 Rho-associated, coiled 100.0 5.3E-39 1.1E-43 324.9 8.2 207 138-362 68-283 (1317)
355 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.5E-37 7.5E-42 298.6 20.5 285 141-452 11-304 (343)
356 cd07857 STKc_MPK1 Catalytic do 100.0 4.8E-37 1E-41 296.5 21.3 282 146-447 1-291 (332)
357 PTZ00024 cyclin-dependent prot 100.0 3.9E-37 8.4E-42 297.7 20.4 277 144-447 7-312 (335)
358 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-37 5.2E-42 293.9 18.4 253 143-448 13-273 (296)
359 KOG0666 Cyclin C-dependent kin 100.0 1.9E-38 4.2E-43 279.2 9.9 207 145-363 24-243 (438)
360 cd05579 STKc_MAST_like Catalyt 100.0 9.1E-38 2E-42 291.7 15.0 246 153-450 1-256 (265)
361 KOG0696 Serine/threonine prote 100.0 5.3E-38 1.1E-42 286.1 12.3 205 141-364 345-554 (683)
362 cd08530 STKc_CNK2-like Catalyt 100.0 5.5E-37 1.2E-41 285.0 19.5 249 146-447 1-252 (256)
363 cd05583 STKc_MSK_N N-terminal 100.0 5.2E-37 1.1E-41 290.4 19.6 256 146-452 1-267 (288)
364 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.1E-37 8.9E-42 298.3 18.8 284 138-448 10-300 (345)
365 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-36 3E-41 287.8 21.5 251 146-447 1-267 (290)
366 KOG0200 Fibroblast/platelet-de 100.0 3.6E-37 7.9E-42 316.2 18.7 271 139-453 290-580 (609)
367 cd06634 STKc_TAO2 Catalytic do 100.0 7.2E-37 1.6E-41 292.1 19.4 250 143-450 13-269 (308)
368 cd07851 STKc_p38 Catalytic dom 100.0 5.3E-37 1.1E-41 297.4 18.3 281 142-447 12-297 (343)
369 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-36 2.9E-41 290.8 20.7 244 147-448 23-273 (313)
370 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-37 5E-42 291.5 15.2 249 145-447 1-276 (280)
371 cd07830 STKc_MAK_like Catalyti 100.0 9.8E-37 2.1E-41 287.8 19.3 275 147-447 1-279 (283)
372 KOG0669 Cyclin T-dependent kin 100.0 1.3E-38 2.7E-43 272.6 4.0 282 144-447 16-314 (376)
373 cd07829 STKc_CDK_like Catalyti 100.0 2.5E-36 5.4E-41 284.8 19.0 270 147-447 1-278 (282)
374 cd08222 STKc_Nek11 Catalytic d 100.0 2.7E-36 5.8E-41 281.2 18.9 250 146-447 1-256 (260)
375 KOG1151 Tousled-like protein k 100.0 1.2E-37 2.6E-42 286.1 8.5 266 137-447 455-740 (775)
376 KOG4236 Serine/threonine prote 100.0 2E-37 4.3E-42 290.1 9.3 195 150-363 569-769 (888)
377 KOG0662 Cyclin-dependent kinas 100.0 2E-36 4.3E-41 246.5 13.8 269 146-447 3-282 (292)
378 KOG1006 Mitogen-activated prot 100.0 5.2E-39 1.1E-43 277.1 -1.6 257 146-447 65-326 (361)
379 KOG0587 Traf2- and Nck-interac 100.0 5.5E-36 1.2E-40 296.4 19.4 265 136-447 10-281 (953)
380 cd05610 STKc_MASTL Catalytic d 100.0 5.4E-36 1.2E-40 312.2 20.4 146 144-306 3-152 (669)
381 KOG0671 LAMMER dual specificit 100.0 6.8E-37 1.5E-41 277.1 10.3 281 143-447 87-405 (415)
382 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-35 3.7E-40 274.0 19.5 236 153-444 1-240 (250)
383 KOG0614 cGMP-dependent protein 100.0 1E-37 2.2E-42 290.9 3.8 242 145-441 420-665 (732)
384 KOG0695 Serine/threonine prote 100.0 4E-36 8.6E-41 267.2 13.1 201 143-362 248-453 (593)
385 cd05576 STKc_RPK118_like Catal 100.0 1.1E-35 2.4E-40 272.9 16.4 220 156-443 4-224 (237)
386 PLN03225 Serine/threonine-prot 100.0 3.4E-35 7.5E-40 298.7 19.2 211 143-361 130-380 (566)
387 KOG0668 Casein kinase II, alph 100.0 2E-36 4.3E-41 255.7 8.1 275 142-447 35-321 (338)
388 KOG1024 Receptor-like protein 100.0 9E-36 2E-40 269.9 8.0 276 137-456 276-559 (563)
389 PLN03224 probable serine/threo 100.0 4.1E-34 8.8E-39 283.6 18.9 216 143-362 143-435 (507)
390 KOG0608 Warts/lats-like serine 100.0 4.2E-35 9E-40 279.9 11.2 213 139-368 623-879 (1034)
391 KOG0984 Mitogen-activated prot 100.0 2.5E-35 5.4E-40 245.3 8.2 223 141-379 42-271 (282)
392 smart00220 S_TKc Serine/Threon 100.0 1.9E-33 4.2E-38 258.6 18.9 238 157-447 1-240 (244)
393 KOG1027 Serine/threonine prote 100.0 6.9E-35 1.5E-39 287.3 6.5 246 147-446 511-765 (903)
394 KOG1290 Serine/threonine prote 100.0 3.8E-32 8.2E-37 253.0 17.6 136 144-291 77-221 (590)
395 KOG1152 Signal transduction se 100.0 6.9E-33 1.5E-37 262.5 10.2 199 143-362 559-771 (772)
396 KOG0576 Mitogen-activated prot 100.0 1.8E-33 3.9E-38 270.6 5.8 254 142-447 12-270 (829)
397 KOG0664 Nemo-like MAPK-related 100.0 6.6E-34 1.4E-38 246.4 0.7 203 146-362 54-260 (449)
398 KOG0665 Jun-N-terminal kinase 100.0 1.7E-32 3.7E-37 243.0 8.4 282 143-447 15-309 (369)
399 KOG0670 U4/U6-associated splic 100.0 3.4E-32 7.3E-37 254.8 6.5 283 144-447 431-745 (752)
400 cd00180 PKc Catalytic domain o 100.0 9.8E-30 2.1E-34 228.4 19.7 210 153-448 1-214 (215)
401 KOG1345 Serine/threonine kinas 100.0 5.1E-31 1.1E-35 228.4 10.4 255 144-452 23-288 (378)
402 KOG1167 Serine/threonine prote 100.0 3.6E-30 7.8E-35 236.7 13.0 282 144-447 35-380 (418)
403 smart00221 STYKc Protein kinas 100.0 2.9E-29 6.2E-34 228.2 18.5 199 147-362 1-202 (225)
404 smart00750 KIND kinase non-cat 100.0 2.2E-28 4.8E-33 213.7 15.1 170 231-455 1-172 (176)
405 PLN00181 protein SPA1-RELATED; 100.0 6.7E-29 1.5E-33 265.3 10.5 201 197-447 28-264 (793)
406 KOG1165 Casein kinase (serine/ 99.9 3.4E-26 7.4E-31 204.0 17.5 269 143-459 26-306 (449)
407 KOG0590 Checkpoint kinase and 99.9 9.1E-28 2E-32 243.5 8.1 254 148-447 321-584 (601)
408 PRK09188 serine/threonine prot 99.9 2.1E-26 4.5E-31 219.3 15.0 165 143-335 16-195 (365)
409 KOG1163 Casein kinase (serine/ 99.9 4.5E-26 9.8E-31 194.5 14.3 264 143-456 13-288 (341)
410 KOG1164 Casein kinase (serine/ 99.9 5.2E-25 1.1E-29 210.7 21.8 264 146-456 19-301 (322)
411 KOG0195 Integrin-linked kinase 99.9 6.2E-27 1.3E-31 203.2 5.3 249 147-453 192-447 (448)
412 PRK10359 lipopolysaccharide co 99.9 1.8E-24 3.8E-29 191.5 9.4 177 143-355 29-217 (232)
413 COG0515 SPS1 Serine/threonine 99.9 8.1E-23 1.7E-27 197.1 21.9 259 147-448 2-275 (384)
414 cd05147 RIO1_euk RIO kinase fa 99.9 2.1E-23 4.6E-28 183.0 12.1 139 150-308 2-167 (190)
415 cd05145 RIO1_like RIO kinase f 99.9 3.8E-22 8.3E-27 175.9 14.0 139 150-309 2-168 (190)
416 PRK12274 serine/threonine prot 99.9 9.4E-22 2E-26 170.3 13.6 187 148-363 5-210 (218)
417 KOG4158 BRPK/PTEN-induced prot 99.9 3.7E-22 8.1E-27 182.4 11.3 203 199-450 274-512 (598)
418 KOG0603 Ribosomal protein S6 k 99.9 2E-23 4.4E-28 202.0 1.9 186 152-362 1-193 (612)
419 PRK10345 hypothetical protein; 99.9 3.1E-21 6.8E-26 170.6 13.8 140 148-305 5-156 (210)
420 KOG1023 Natriuretic peptide re 99.9 1.4E-21 3.1E-26 189.4 12.4 219 195-455 1-227 (484)
421 KOG1240 Protein kinase contain 99.9 1.9E-22 4.1E-27 205.0 6.0 250 146-452 24-295 (1431)
422 PF14531 Kinase-like: Kinase-l 99.9 1.6E-21 3.4E-26 178.0 10.2 239 146-439 13-288 (288)
423 KOG1166 Mitotic checkpoint ser 99.9 8.1E-21 1.8E-25 196.7 15.2 197 142-358 695-901 (974)
424 smart00090 RIO RIO-like kinase 99.8 9E-20 1.9E-24 165.5 12.5 141 146-308 29-198 (237)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 7.1E-21 1.5E-25 181.1 4.2 125 219-355 329-457 (516)
426 KOG0606 Microtubule-associated 99.8 1E-20 2.2E-25 192.4 4.9 213 140-440 78-304 (1205)
427 PRK14879 serine/threonine prot 99.8 9E-19 2E-23 157.6 14.0 134 151-307 2-143 (211)
428 cd05144 RIO2_C RIO kinase fami 99.8 6.2E-19 1.4E-23 156.7 12.7 138 145-309 15-176 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 3.9E-18 8.4E-23 152.0 13.1 130 152-307 1-138 (199)
430 PRK09605 bifunctional UGMP fam 99.8 6.4E-18 1.4E-22 172.6 14.2 138 143-307 331-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 4.9E-17 1.1E-21 143.3 12.2 135 150-308 2-164 (187)
432 KOG0590 Checkpoint kinase and 99.7 8.3E-19 1.8E-23 178.4 0.3 256 144-446 19-284 (601)
433 PRK01723 3-deoxy-D-manno-octul 99.7 3.8E-16 8.2E-21 142.1 14.3 139 150-307 36-191 (239)
434 KOG1187 Serine/threonine prote 99.7 4.3E-17 9.3E-22 156.8 5.9 98 1-116 252-352 (361)
435 cd05120 APH_ChoK_like Aminogly 99.7 1.3E-15 2.9E-20 129.1 12.9 135 149-307 2-138 (155)
436 KOG1266 Protein kinase [Signal 99.6 2.6E-15 5.7E-20 134.7 8.6 161 193-359 119-281 (458)
437 TIGR01982 UbiB 2-polyprenylphe 99.6 5E-15 1.1E-19 146.4 8.8 143 150-310 122-309 (437)
438 KOG0601 Cyclin-dependent kinas 99.5 2.2E-14 4.8E-19 139.7 7.8 199 146-362 115-329 (524)
439 PRK04750 ubiB putative ubiquin 99.5 2.4E-13 5.3E-18 135.9 9.9 147 144-310 119-316 (537)
440 cd05151 ChoK Choline Kinase (C 99.4 1.2E-12 2.7E-17 113.3 10.4 127 150-306 3-135 (170)
441 cd05146 RIO3_euk RIO kinase fa 99.4 8.8E-12 1.9E-16 108.4 13.7 135 151-308 3-174 (197)
442 KOG1243 Protein kinase [Genera 99.3 1.8E-11 4E-16 120.7 15.3 167 166-357 34-200 (690)
443 KOG0606 Microtubule-associated 99.3 6.9E-13 1.5E-17 136.1 0.8 207 142-365 801-1040(1205)
444 COG4248 Uncharacterized protei 99.3 2.7E-10 5.9E-15 106.4 16.6 280 149-459 15-307 (637)
445 KOG0601 Cyclin-dependent kinas 99.3 4.7E-12 1E-16 123.6 5.1 250 142-452 262-518 (524)
446 COG3642 Mn2+-dependent serine/ 99.2 1.2E-10 2.5E-15 97.7 11.8 129 151-307 2-140 (204)
447 cd05154 ACAD10_11_like Acyl-Co 99.2 1.6E-10 3.5E-15 104.6 12.8 145 151-307 4-206 (223)
448 PF01163 RIO1: RIO1 family; I 99.2 3E-10 6.6E-15 98.4 11.8 125 160-308 1-156 (188)
449 KOG3087 Serine/threonine prote 99.1 6.2E-10 1.3E-14 92.9 12.0 143 149-307 11-165 (229)
450 PRK15123 lipopolysaccharide co 99.0 6E-09 1.3E-13 96.0 14.5 145 151-306 28-193 (268)
451 PLN00113 leucine-rich repeat r 99.0 2.6E-10 5.6E-15 126.0 6.1 100 2-118 853-953 (968)
452 KOG3741 Poly(A) ribonuclease s 99.0 6.8E-09 1.5E-13 99.7 14.4 180 157-359 288-475 (655)
453 COG0478 RIO-like serine/threon 99.0 4.6E-09 9.9E-14 93.6 10.2 136 146-307 92-251 (304)
454 PF06293 Kdo: Lipopolysacchari 98.8 5E-08 1.1E-12 86.9 11.9 110 185-307 55-170 (206)
455 KOG2137 Protein kinase [Signal 98.8 1.3E-09 2.8E-14 108.2 1.6 150 262-446 106-263 (700)
456 PRK09902 hypothetical protein; 98.8 2.5E-07 5.4E-12 80.7 15.0 158 137-306 10-178 (216)
457 KOG0192 Tyrosine kinase specif 98.7 1.5E-08 3.2E-13 97.3 6.0 87 3-121 222-308 (362)
458 KOG1026 Nerve growth factor re 98.7 6.6E-09 1.4E-13 105.4 2.7 86 1-119 679-765 (774)
459 PF06176 WaaY: Lipopolysacchar 98.7 1.9E-07 4.1E-12 81.7 11.0 142 143-306 29-182 (229)
460 COG0661 AarF Predicted unusual 98.7 1.2E-07 2.6E-12 94.7 10.3 139 151-310 131-317 (517)
461 KOG0197 Tyrosine kinases [Sign 98.6 2.5E-08 5.4E-13 96.2 4.3 84 1-117 378-462 (468)
462 smart00750 KIND kinase non-cat 98.6 3.2E-08 6.8E-13 86.0 4.4 92 2-117 79-170 (176)
463 PHA02988 hypothetical protein; 98.6 7.3E-08 1.6E-12 90.7 5.2 84 2-117 197-280 (283)
464 KOG0576 Mitogen-activated prot 98.5 4.1E-08 8.8E-13 96.8 2.8 190 144-362 241-432 (829)
465 COG1718 RIO1 Serine/threonine 98.5 1.5E-06 3.3E-11 77.0 11.3 135 152-308 55-216 (268)
466 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.9E-06 6.3E-11 76.6 13.4 143 151-306 7-181 (226)
467 PF07714 Pkinase_Tyr: Protein 98.5 4.9E-08 1.1E-12 90.7 1.2 78 3-113 181-259 (259)
468 KOG1235 Predicted unusual prot 98.4 8.3E-07 1.8E-11 88.4 9.6 139 150-310 166-357 (538)
469 PF12260 PIP49_C: Protein-kina 98.4 9.7E-06 2.1E-10 70.7 14.9 102 189-308 7-112 (188)
470 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.4 6E-08 1.3E-12 91.3 0.9 96 2-116 185-281 (283)
471 KOG4721 Serine/threonine prote 98.4 1.1E-07 2.5E-12 92.1 2.2 86 3-120 287-372 (904)
472 PF01636 APH: Phosphotransfera 98.4 5.9E-06 1.3E-10 75.2 12.7 152 150-306 2-196 (239)
473 KOG1095 Protein tyrosine kinas 98.3 2.4E-07 5.2E-12 97.7 3.3 88 1-121 878-966 (1025)
474 COG2112 Predicted Ser/Thr prot 98.3 3.7E-06 8E-11 70.4 8.5 129 147-307 24-155 (201)
475 cd05048 PTKc_Ror Catalytic Dom 98.3 4.4E-07 9.5E-12 85.3 3.2 81 2-115 201-282 (283)
476 PF10707 YrbL-PhoP_reg: PhoP r 98.3 2.3E-05 4.9E-10 68.7 13.2 134 149-306 5-171 (199)
477 cd05094 PTKc_TrkC Catalytic do 98.3 6.9E-07 1.5E-11 84.4 4.0 84 2-118 200-284 (291)
478 cd05111 PTK_HER3 Pseudokinase 98.2 1.2E-06 2.6E-11 82.3 4.5 84 2-118 186-270 (279)
479 cd05102 PTKc_VEGFR3 Catalytic 98.2 9.3E-07 2E-11 85.5 3.8 84 2-117 251-335 (338)
480 cd05150 APH Aminoglycoside 3'- 98.2 2.7E-05 5.9E-10 71.5 13.1 75 153-236 6-82 (244)
481 cd05038 PTKc_Jak_rpt2 Catalyti 98.2 7.4E-07 1.6E-11 83.7 2.5 87 2-116 187-283 (284)
482 cd05052 PTKc_Abl Catalytic dom 98.2 1.1E-06 2.4E-11 81.6 3.6 81 2-115 180-261 (263)
483 cd05063 PTKc_EphR_A2 Catalytic 98.2 1.1E-06 2.3E-11 81.9 3.4 82 2-116 185-267 (268)
484 cd05060 PTKc_Syk_like Catalyti 98.2 1.3E-06 2.9E-11 80.8 3.7 82 2-116 173-255 (257)
485 KOG0193 Serine/threonine prote 98.2 6E-07 1.3E-11 87.9 1.4 87 3-118 569-655 (678)
486 cd05091 PTKc_Ror2 Catalytic do 98.2 1.2E-06 2.5E-11 82.5 3.2 80 2-114 201-281 (283)
487 cd08528 STKc_Nek10 Catalytic d 98.2 1.3E-06 2.7E-11 81.5 3.5 27 2-28 188-214 (269)
488 cd05045 PTKc_RET Catalytic dom 98.2 1.6E-06 3.4E-11 81.9 4.0 82 3-117 205-287 (290)
489 cd05035 PTKc_Axl_like Catalyti 98.2 1.6E-06 3.5E-11 80.9 4.0 81 2-115 190-271 (273)
490 cd08228 STKc_Nek6 Catalytic do 98.1 1.4E-06 3E-11 81.1 3.5 84 3-116 182-265 (267)
491 cd05095 PTKc_DDR2 Catalytic do 98.1 1.9E-06 4E-11 81.7 4.1 25 90-114 271-295 (296)
492 cd05058 PTKc_Met_Ron Catalytic 98.1 1.6E-06 3.5E-11 80.5 3.6 84 2-117 177-260 (262)
493 cd05114 PTKc_Tec_Rlk Catalytic 98.1 1.7E-06 3.8E-11 80.0 3.7 78 3-113 177-255 (256)
494 cd08224 STKc_Nek6_Nek7 Catalyt 98.1 2.2E-06 4.7E-11 79.8 4.3 84 3-116 182-265 (267)
495 PF13095 FTA2: Kinetochore Sim 98.1 6.9E-05 1.5E-09 65.1 13.0 131 144-305 36-206 (207)
496 cd05054 PTKc_VEGFR Catalytic d 98.1 1.8E-06 4E-11 83.4 3.8 84 2-117 250-334 (337)
497 cd05068 PTKc_Frk_like Catalyti 98.1 1.9E-06 4.1E-11 80.0 3.6 81 2-115 179-260 (261)
498 cd05093 PTKc_TrkB Catalytic do 98.1 2.3E-06 4.9E-11 80.8 4.2 85 2-119 197-282 (288)
499 cd05079 PTKc_Jak1_rpt2 Catalyt 98.1 2.2E-06 4.8E-11 80.7 4.0 26 2-27 187-212 (284)
500 cd05110 PTKc_HER4 Catalytic do 98.1 2.6E-06 5.7E-11 81.0 4.5 85 2-119 186-271 (303)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-54 Score=410.06 Aligned_cols=290 Identities=34% Similarity=0.584 Sum_probs=240.9
Q ss_pred ccCCCchhhhhcccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeee
Q 012014 131 TINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210 (473)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 210 (473)
....+++.++..+|++|...++||+|+||.||+|...+++.||||++.........+|.+|+.++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45668999999999999999999999999999999988999999988754432145699999999999999999999999
Q ss_pred eccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 211 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
.+.+ ...+||+||+++|+|.++|...... .++|.++++|+.++|+||+|||+.+...||||||||+|||
T Consensus 141 ~e~~----~~~~LVYEym~nGsL~d~L~~~~~~-------~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNIL 209 (361)
T KOG1187|consen 141 LEGG----EHRLLVYEYMPNGSLEDHLHGKKGE-------PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNIL 209 (361)
T ss_pred ecCC----ceEEEEEEccCCCCHHHHhCCCCCC-------CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHee
Confidence 7543 1579999999999999999886542 3679999999999999999999877778999999999999
Q ss_pred ecCCccEEEeecccccccCccccccceeec-cCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCC-CCcc
Q 012014 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF-TGKM 368 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~-~~~~ 368 (473)
+|+++++||+|||+|+..+.. ....... .||.+|+|||+...+..+.|+|||||||+++||+||+.|.+... ....
T Consensus 210 LD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~ 287 (361)
T KOG1187|consen 210 LDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGEL 287 (361)
T ss_pred ECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccc
Confidence 999999999999999765431 1111112 69999999999999999999999999999999999999987643 3444
Q ss_pred cHHHHHHhhcC-cchhhhccccchH-HHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 369 NLRNFVKMALP-QRAEEVVDDFNLQ-EIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 369 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
.+..|...... ..+.+++|+.+.. ... .......+..++.+|++.+|.+||+|.||+
T Consensus 288 ~l~~w~~~~~~~~~~~eiiD~~l~~~~~~---------------------~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 288 SLVEWAKPLLEEGKLREIVDPRLKEGEYP---------------------DEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred cHHHHHHHHHHCcchhheeCCCccCCCCC---------------------hHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 57777655544 3677888876542 111 014667799999999999999999999999
Q ss_pred HHHHHHHH
Q 012014 447 SRLRLIRR 454 (473)
Q Consensus 447 ~~L~~l~~ 454 (473)
+.|+.+..
T Consensus 347 ~~L~~~~~ 354 (361)
T KOG1187|consen 347 KELEGILS 354 (361)
T ss_pred HHHHhhcc
Confidence 99966644
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-53 Score=380.36 Aligned_cols=253 Identities=24% Similarity=0.312 Sum_probs=207.8
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeec-cCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++.+..+.||+|+.|+||+++ ..+++.+|+|++.. ......+++.+|+++++..+||+||++||.|.... . ...
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~---~-~is 154 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG---E-EIS 154 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---c-eEE
Confidence 356678899999999999999 56789999999953 33445678899999999999999999999997532 2 589
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
|+||||++|||++++...+ .+++....+|+.+|++||.|||. .++||||||||+|||++..|.+|||||
T Consensus 155 I~mEYMDgGSLd~~~k~~g---------~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRVG---------RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred eehhhcCCCCHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccc
Confidence 9999999999999998764 35688899999999999999993 389999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|.++.+... ...++.||..|||||.+.+..|+.++||||||++++|+++|+.||.............+.....+..
T Consensus 224 GVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 224 GVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP 299 (364)
T ss_pred cccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC
Confidence 999877543 4456789999999999999999999999999999999999999998653323332322222211111
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHH-HHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIIL-ECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+ +. .++++++.++..||++||.+|||+.|+++
T Consensus 300 P~l-------------------------------P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 300 PRL-------------------------------PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCC-------------------------------CcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 11 36778999999999999999999999875
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-52 Score=394.35 Aligned_cols=265 Identities=27% Similarity=0.428 Sum_probs=212.9
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--chhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
....+...+.||+|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|+|.+.. ..
T Consensus 39 ~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~ 114 (362)
T KOG0192|consen 39 DPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GS 114 (362)
T ss_pred ChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----Cc
Confidence 344555667799999999999997554559999997543222 458999999999999999999999996542 15
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCC-eeeccCCCCcEEecCCc-cEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPP-IAHCNLKPSNVLLDDEM-IGH 298 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-iiH~Dlkp~Nil~~~~~-~~k 298 (473)
.++||||+++|+|.+++..... ..+++..++.++.|||+||.||| +++ ||||||||+|||++.++ ++|
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~-------~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~K 184 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRK-------RKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLK 184 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhccc-------CCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEE
Confidence 7999999999999999987411 14779999999999999999999 888 99999999999999997 999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCcccc--CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL--GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
|+|||+++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||..||.+....... ...+..
T Consensus 185 I~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~-~~v~~~ 261 (362)
T KOG0192|consen 185 IADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA-SAVVVG 261 (362)
T ss_pred ECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH-HHHHhc
Confidence 99999998764321 2233367999999999999 568999999999999999999999999876542111 111100
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHhh
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRKL 456 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~~ 456 (473)
. .++..+..+++.+..|+.+||+.||..||++.+|+..|+.+...+
T Consensus 262 ~----------------------------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 262 G----------------------------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred C----------------------------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 0 011222347788999999999999999999999999999998766
Q ss_pred cc
Q 012014 457 LE 458 (473)
Q Consensus 457 ~~ 458 (473)
..
T Consensus 308 ~~ 309 (362)
T KOG0192|consen 308 SS 309 (362)
T ss_pred cc
Confidence 54
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-52 Score=377.83 Aligned_cols=252 Identities=19% Similarity=0.275 Sum_probs=202.6
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC-------CchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG-------GSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
.+.|.+.+.||+|+||.|-+|. ..+|+.||||++++.... ......+|+++|++|+|||||+++++|...+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 4567889999999999999998 678999999999743211 1233579999999999999999999986654
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE- 294 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~- 294 (473)
..|+||||+.||+|.+++-.+.. +.+.....+++|++.|+.||| ++||+||||||+|||+..+
T Consensus 250 ----s~YmVlE~v~GGeLfd~vv~nk~---------l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~ 313 (475)
T KOG0615|consen 250 ----SSYMVLEYVEGGELFDKVVANKY---------LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDA 313 (475)
T ss_pred ----ceEEEEEEecCccHHHHHHhccc---------cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCC
Confidence 56999999999999999987763 336667789999999999999 9999999999999999766
Q ss_pred --ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCC---CCcccchhhHhHHHHHHHhCCCCCCCCCCCccc
Q 012014 295 --MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE---ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMN 369 (473)
Q Consensus 295 --~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~ 369 (473)
..+||+|||+|+..+. .....+.+|||.|.|||++.+.. +..++|+||+||+||-+++|.+||.+.......
T Consensus 314 e~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl 390 (475)
T KOG0615|consen 314 EDCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSL 390 (475)
T ss_pred cceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccH
Confidence 7899999999998753 44456788999999999998765 334789999999999999999999876554432
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..++.+....-. +..-....++..+|+.+||..||++|||+.|++.
T Consensus 391 ~eQI~~G~y~f~--------------------------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 391 KEQILKGRYAFG--------------------------------PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHHhcCccccc--------------------------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 222222211110 0111246678889999999999999999999864
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-51 Score=393.49 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=209.3
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeec---cCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+|...++||+|||+.||.++. .+|+.||+|++.+ .+....+.+.+|+++.+.|+|||||+++++|.+ ..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-----s~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-----SNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-----CCc
Confidence 5799999999999999999995 8899999999974 345567789999999999999999999999865 448
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+|||+|+|+.++|..+++... .+++.++..+++||+.||.||| +++|||||||..|+|++++.++||+
T Consensus 93 VYivLELC~~~sL~el~Krrk---------~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIg 160 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK---------PLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIG 160 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC---------CCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEec
Confidence 999999999999999998654 4779999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+|..+.... ....+.+|||.|.|||++....++..+||||+||+||-|+.|++||... .+....
T Consensus 161 DFGLAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety------ 227 (592)
T KOG0575|consen 161 DFGLATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETY------ 227 (592)
T ss_pred ccceeeeecCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHH------
Confidence 999999886533 3445678999999999999999999999999999999999999999752 111111
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.....++ ..+.....+..+||..+|+.||.+|||+++|+.
T Consensus 228 ------~~Ik~~~Y--------------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 228 ------NKIKLNEY--------------------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ------HHHHhcCc--------------------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11111110 112234567789999999999999999999975
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-52 Score=360.98 Aligned_cols=263 Identities=22% Similarity=0.289 Sum_probs=207.0
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
-.+|.+.++||+|.||+||++. ..+|..+|.|.++... ......+..|+.+|++|+|||||++++.-.. ++...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchh
Confidence 3468899999999999999998 7899999999987322 2334568899999999999999999984322 33445
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCC-CCCeeeccCCCCcEEecCCccEEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDC-QPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
++||||||.+|+|.+.++...... ..+++..+++++.|++.||.++|+.. ..-|+||||||.||+++.+|.+||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qk-----r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQK-----RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhcc-----ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 899999999999999997654321 24779999999999999999999422 123999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||+++.+.... ....+.+|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+. ++.+.-+....
T Consensus 170 GDfGL~r~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~q 242 (375)
T KOG0591|consen 170 GDFGLGRFLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQ 242 (375)
T ss_pred ccchhHhHhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHc
Confidence 9999999886543 3334567999999999999999999999999999999999999999873 22222222111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
.....+. ....+..+..|+..|+..||+.||+...++..+..
T Consensus 243 gd~~~~p------------------------------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 GDYPPLP------------------------------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCCCCc------------------------------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1111111 13467788999999999999999996555544443
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-51 Score=370.46 Aligned_cols=201 Identities=29% Similarity=0.467 Sum_probs=178.2
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
...+|...+.||.|+||+||+|+ ..++..||||.+... .....+.+..|+.+|+.++|||||++++++... .
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----D 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----C
Confidence 34689999999999999999999 556899999999755 334456788999999999999999999998654 4
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-----
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE----- 294 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~----- 294 (473)
+.|||||||.||||.+||+.++ .+++..+..++.||+.||++|| +++||||||||+|||++..
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~---------~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRG---------RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCC
Confidence 8999999999999999999886 3568999999999999999999 9999999999999999764
Q ss_pred -ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 295 -MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 295 -~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
-.+||+|||+|+.+.. .....+.+|++.|||||++....|+.|+|+||+|+|+|+|++|+.||+..
T Consensus 151 ~~~LKIADFGfAR~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred CceEEecccchhhhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 4689999999998864 33445678999999999999999999999999999999999999999853
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-51 Score=384.35 Aligned_cols=262 Identities=25% Similarity=0.396 Sum_probs=214.9
Q ss_pred hhcccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+......+...+.||+|-||.||.|.+.....||+|.++... -..+.|.+|+++|++|+|+|||+++++|....
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~----- 274 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE----- 274 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----
Confidence 333444567788999999999999998777899999998542 34577899999999999999999999996532
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
.++||||||+.|+|.+||+..... .+...+.+.++.|||+|++||+ ++++|||||.+.|||++++..+||
T Consensus 275 piyIVtE~m~~GsLl~yLr~~~~~-------~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKI 344 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRTREGG-------LLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKI 344 (468)
T ss_pred ceEEEEEecccCcHHHHhhhcCCC-------ccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEE
Confidence 689999999999999999973322 3567899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+|+...+.. ........-...|.|||.+..+.++.|||||||||+||||+| |+.||.++...+
T Consensus 345 sDFGLAr~~~d~~-Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------- 412 (468)
T KOG0197|consen 345 SDFGLARLIGDDE-YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------- 412 (468)
T ss_pred cccccccccCCCc-eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----------
Confidence 9999999544332 111222223567999999999999999999999999999999 999988754322
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
+...++.|.++ +.+..||..+.+||..||+.+|++|||+..+...|+.+..
T Consensus 413 -----------v~~~le~GyRl--------------p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 413 -----------VLELLERGYRL--------------PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred -----------HHHHHhccCcC--------------CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 12233333333 3445689999999999999999999999999999988854
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-49 Score=358.02 Aligned_cols=244 Identities=25% Similarity=0.298 Sum_probs=200.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..++|++.++||+|+||.||.++ ..+++.+|+|++++.. ....+....|..+|..++||+||+++..|. +.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-----t~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-----TE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-----cC
Confidence 45789999999999999999999 5678999999997533 334567889999999999999999998874 45
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
..+|+|+||+.||.|..+|++.+ .|++..+.-++.+|+.||.||| ++|||||||||+|||+|.+|+++
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg---------~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~ 165 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREG---------RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIK 165 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcC---------CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEE
Confidence 58999999999999999999776 4778889999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||+++..-.. .....+.+||+.|||||++.+..|+..+|+||||+++|||++|.+||.+.... .+.+...
T Consensus 166 LtDFgL~k~~~~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~-----~~~~~I~ 238 (357)
T KOG0598|consen 166 LTDFGLCKEDLKD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK-----KMYDKIL 238 (357)
T ss_pred EeccccchhcccC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH-----HHHHHHh
Confidence 9999999854332 33445578999999999999999999999999999999999999999864322 2222221
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
...... .+.-...+..+|+...|+.||++|..
T Consensus 239 ~~k~~~-------------------------------~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 239 KGKLPL-------------------------------PPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred cCcCCC-------------------------------CCccCCHHHHHHHHHHhccCHHHhcC
Confidence 111000 00113446678999999999999963
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-48 Score=366.87 Aligned_cols=253 Identities=23% Similarity=0.346 Sum_probs=209.0
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeec---cCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecccc
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNL---IRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 215 (473)
....++|..++.||+|+|++|++|+ ..+++.||||++.+ .+....+....|-.+|.+| .||.|++||..|.+
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD--- 145 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD--- 145 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec---
Confidence 4566899999999999999999999 67899999999963 3344556678899999999 89999999999854
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
...+|+|+||+++|+|.++|++.+ .|.+..+..++.+|+.||+||| ++|||||||||+|||+|+++
T Consensus 146 --~~sLYFvLe~A~nGdll~~i~K~G---------sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 146 --EESLYFVLEYAPNGDLLDLIKKYG---------SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred --ccceEEEEEecCCCcHHHHHHHhC---------cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCC
Confidence 447899999999999999999886 4668888999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCccccc---------cce--eeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCC
Q 012014 296 IGHVGDFGMARFLPAIDKQ---------NRF--ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF 364 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 364 (473)
++||+|||.|+.+...... ... .+++||..|.+||++.....+..+|||+||||+|.|+.|.+||.+..
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 9999999999987654322 112 56889999999999999999999999999999999999999998632
Q ss_pred CCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 365 TGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
.-- .+..++.. ..+.+...++.+.+|+.+.|..||.+|+|+++
T Consensus 292 eyl-iFqkI~~l------------------------------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~q 334 (604)
T KOG0592|consen 292 EYL-IFQKIQAL------------------------------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQ 334 (604)
T ss_pred HHH-HHHHHHHh------------------------------------cccCCCCCCHHHHHHHHHHHccCccccccHHH
Confidence 211 01111100 11123345667888999999999999999977
Q ss_pred HHH
Q 012014 445 VES 447 (473)
Q Consensus 445 v~~ 447 (473)
|-+
T Consensus 335 Ik~ 337 (604)
T KOG0592|consen 335 IKA 337 (604)
T ss_pred Hhh
Confidence 754
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-48 Score=354.22 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=204.5
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|...+.||+|+||.||++.. .+|...|||.+........+.+.+|+.+|.+++|||||+++|...... + ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 45678899999999999999994 458999999987654333667899999999999999999999743321 1 4679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~kl~D 301 (473)
++|||+++|+|.+++...+. .+++..+..+++||++||+||| ++|||||||||+|||++. ++.+||+|
T Consensus 93 i~mEy~~~GsL~~~~~~~g~--------~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaD 161 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG--------KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLAD 161 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEecc
Confidence 99999999999999998763 2668999999999999999999 999999999999999999 79999999
Q ss_pred cccccccCc-cccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 302 FGMARFLPA-IDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 302 fg~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
||+++.... ...........||+.|||||++..+ ....++|||||||++.||+||++||....... .........
T Consensus 162 FG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~---~~~~~ig~~ 238 (313)
T KOG0198|consen 162 FGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA---EALLLIGRE 238 (313)
T ss_pred CccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH---HHHHHHhcc
Confidence 999987653 1112233456799999999999863 33459999999999999999999998641111 111111111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.... ..+...+.+..+++..|+..||++||||.++++.--..
T Consensus 239 ~~~P-------------------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 239 DSLP-------------------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred CCCC-------------------------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 1111 12233566788999999999999999999998765443
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.9e-48 Score=338.64 Aligned_cols=276 Identities=17% Similarity=0.244 Sum_probs=203.9
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
+.|+...++|+|+||.||+++ ..+|+.||||++..... .-.+-..+|++.|++++|||+|.++.+|.. ....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-----krkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-----KRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-----ccee
Confidence 357788899999999999999 56799999999974332 223456899999999999999999999843 4578
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+||+|||+. ++.+-|..... .++......++.|++.|+.|+| ++++|||||||+|||++.+|.+||||
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~--------G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCD 144 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPN--------GVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCD 144 (396)
T ss_pred EEEeeecch-HHHHHHHhccC--------CCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEecc
Confidence 999999976 44455554432 3557888999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHH--HHHhhc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRN--FVKMAL 378 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~--~~~~~~ 378 (473)
||+|+.+.. .....+....|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|.|..+-+..+.. .+....
T Consensus 145 FGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~ 222 (396)
T KOG0593|consen 145 FGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLI 222 (396)
T ss_pred chhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccC
Confidence 999998864 2334444567999999999988 67999999999999999999999999876544322111 111111
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
| +-.+++...- +- ...-.+............+....-+.+|+..||+.||++|+|.+|++.
T Consensus 223 p-rhq~iF~~N~---~F----~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 223 P-RHQSIFSSNP---FF----HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred H-HHHHHhccCC---ce----eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1 1111111100 00 000111111112222233455668899999999999999999999874
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-47 Score=348.80 Aligned_cols=266 Identities=23% Similarity=0.262 Sum_probs=214.6
Q ss_pred hhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
+-...++|++..+||.|..++||+|+ ...+..||||+++..... ..+.+++|+..|+.++||||++++..|...
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~---- 96 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD---- 96 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec----
Confidence 34456789999999999999999999 678899999999865543 358899999999999999999999998653
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
..+|+||.||.+||+.+.++..... .|.+..+..|++++++||.||| .+|.||||||+.||||+.+|.+
T Consensus 97 -~~LWvVmpfMa~GS~ldIik~~~~~-------Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~V 165 (516)
T KOG0582|consen 97 -SELWVVMPFMAGGSLLDIIKTYYPD-------GLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTV 165 (516)
T ss_pred -ceeEEeehhhcCCcHHHHHHHHccc-------cccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcE
Confidence 3789999999999999999877643 4678889999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccc-e-eeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 298 HVGDFGMARFLPAIDKQNR-F-ICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~-~-~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
||+|||.+..+........ . ....||+.|||||++.. ..|+.|+||||||++..||.+|..||......++.+...
T Consensus 166 kLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL 245 (516)
T KOG0582|consen 166 KLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL 245 (516)
T ss_pred EEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 9999999877654332211 1 45679999999999543 359999999999999999999999998765444322211
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+...|... .+....+........+.+++..||.+||.+|||++++++
T Consensus 246 -qn~pp~~~--------------------------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 246 -QNDPPTLL--------------------------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -cCCCCCcc--------------------------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11111111 111222334456778999999999999999999999975
No 14
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-48 Score=358.93 Aligned_cols=279 Identities=19% Similarity=0.241 Sum_probs=211.5
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchh-HHHHHHHHHhcC-CCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIK-HRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~-~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 220 (473)
-++|.+.++||.|.||.||+|+ ..+|..||||+++..-....+. -.+|+..|++|+ ||||+++.+++.+.+ ..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----RI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----ce
Confidence 4678999999999999999999 6779999999998654433332 358999999998 999999999986533 37
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+++||||| ..+|.++++.+.. .|++.++..|+.||+.||+|+| .+|+.|||+||+|||+..+..+||+
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r--------~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKia 152 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNR--------LFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIA 152 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCC--------cCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEec
Confidence 89999999 5699999988743 5889999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+|+.+.... ..+..+.|..|+|||++.. +.|+.+.|+||+|||++|+.+-++.|.|....+..+. +....-.
T Consensus 153 DFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K-Ic~VLGt 228 (538)
T KOG0661|consen 153 DFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK-ICEVLGT 228 (538)
T ss_pred ccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH-HHHHhCC
Confidence 999999875533 3344557999999998765 5699999999999999999999999988654443222 2222211
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.....+.....+ ...+ ....+.-.+.........++.+..+|+.+|+.+||.+||||+|.++.
T Consensus 229 P~~~~~~eg~~L-----a~~m-nf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 229 PDKDSWPEGYNL-----ASAM-NFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CccccchhHHHH-----HHHh-ccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111110000 0001 01111112222333344578889999999999999999999998753
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-47 Score=358.36 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=211.0
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
...|....+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||++++.|... ..+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeE
Confidence 4568888899999999999998 677899999999987777788899999999999999999999988543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||++||+|.+.+.... +++.++..|+++++.||+||| .+||+|||||.+|||++.+|.+||+||
T Consensus 347 VVMEym~ggsLTDvVt~~~----------~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR----------MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred EEEeecCCCchhhhhhccc----------ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeee
Confidence 9999999999999987663 669999999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++..+.... ....+..|||.|||||+.....|++++||||||++++||+-|.+||-. +..+..+......+..
T Consensus 414 GFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa~ng~P 487 (550)
T KOG0578|consen 414 GFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIATNGTP 487 (550)
T ss_pred eeeecccccc--CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHhhcCCC
Confidence 9998775533 245567799999999999999999999999999999999999999964 2222222222111111
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
++ .........+.+++.+||..|+.+|||+.|+|+
T Consensus 488 -~l-----------------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 -KL-----------------------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -Cc-----------------------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 00 112345678899999999999999999999986
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-47 Score=363.50 Aligned_cols=270 Identities=25% Similarity=0.346 Sum_probs=219.3
Q ss_pred CchhhhhcccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeec
Q 012014 135 PSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSG 212 (473)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 212 (473)
.+..+|....+.+.+...||+|.||+||+|.|.. .||||+++.... ...+.|++|+..+++-+|.||+-+.|+|..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3457777888888999999999999999999753 699999985443 345789999999999999999999999865
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
.. ..||+.+|.|.+|+.+|+-... .|...+.++|+.||+.|+.||| .++|||||||..|||+.
T Consensus 460 p~------~AIiTqwCeGsSLY~hlHv~et--------kfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~ 522 (678)
T KOG0193|consen 460 PP------LAIITQWCEGSSLYTHLHVQET--------KFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLH 522 (678)
T ss_pred Cc------eeeeehhccCchhhhhccchhh--------hhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEc
Confidence 43 3899999999999999987653 4778899999999999999999 99999999999999999
Q ss_pred CCccEEEeecccccccCccccccceeeccCCCCcCCCccccC---CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCccc
Q 012014 293 DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG---CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMN 369 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~ 369 (473)
+++.|||+|||++..-.............|...|||||++.. .+|+..+||||||+|+|||++|..||.. ...+..
T Consensus 523 ~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqI 601 (678)
T KOG0193|consen 523 EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQI 601 (678)
T ss_pred cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhhe
Confidence 999999999999976554444444555668899999999864 4699999999999999999999999983 222211
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
+-..-+.+...+.. ....++++++.+|+..||+.++++||++.+|+..|
T Consensus 602 ifmVGrG~l~pd~s-------------------------------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l 650 (678)
T KOG0193|consen 602 IFMVGRGYLMPDLS-------------------------------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKL 650 (678)
T ss_pred EEEecccccCccch-------------------------------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHH
Confidence 11111111111111 11245889999999999999999999999999999
Q ss_pred HHHHHh
Q 012014 450 RLIRRK 455 (473)
Q Consensus 450 ~~l~~~ 455 (473)
+.+..+
T Consensus 651 ~~l~~~ 656 (678)
T KOG0193|consen 651 EELLPS 656 (678)
T ss_pred HHhhhc
Confidence 888764
No 17
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.8e-48 Score=381.46 Aligned_cols=275 Identities=24% Similarity=0.382 Sum_probs=220.4
Q ss_pred hhhhhcccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeee
Q 012014 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTA 209 (473)
Q Consensus 137 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~ 209 (473)
..-......+.+..+.||+|+||.||+|+.. +...||||.++..... ...+|++|++++..++|||||+++|+
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV 557 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV 557 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence 3334445566777889999999999999843 2467999999866555 66789999999999999999999999
Q ss_pred eeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCC-----CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-----PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 210 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
|... ...++|+|||..|||.+||......... +.+..++..+.+.|+.|||.|+.||- ++.+|||||
T Consensus 558 C~~~-----~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDL 629 (774)
T KOG1026|consen 558 CREG-----DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDL 629 (774)
T ss_pred EccC-----CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccch
Confidence 9654 3679999999999999999876543211 11334788999999999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 363 (473)
...|+||.++..|||+|||+++..-..+.........-..+|||||.+..+.||++||||||||+|||+++ |..||.+.
T Consensus 630 ATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl 709 (774)
T KOG1026|consen 630 ATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL 709 (774)
T ss_pred hhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc
Confidence 99999999999999999999986644332222111122568999999999999999999999999999999 99999986
Q ss_pred CCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 364 FTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.+++.. +. +.... . .+.+.+||.++++||..||+.+|.+|||++
T Consensus 710 Sn~EVI--e~-----------i~~g~----------------------l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 710 SNQEVI--EC-----------IRAGQ----------------------L-LSCPENCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred chHHHH--HH-----------HHcCC----------------------c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence 654320 00 00111 1 234567999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012014 444 DVESRLRLIRRK 455 (473)
Q Consensus 444 ev~~~L~~l~~~ 455 (473)
||-.+|+.+-..
T Consensus 754 eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 754 EIHSRLQAWAQA 765 (774)
T ss_pred HHHHHHHHHHhc
Confidence 999999988543
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-46 Score=350.61 Aligned_cols=280 Identities=21% Similarity=0.265 Sum_probs=210.6
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+.|+.+++||+|.||.||+|+ ..+|+.||+|++.... ........+||.||++|+||||+++.+...+. ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 4568889999999999999999 6789999999998544 45566788999999999999999999998764 2457
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+|||+|||+. ||..++.... ..|++.++..++.||+.||+|+| ++||+|||||.+|||||++|.+||+
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~--------vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKia 260 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPG--------VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIA 260 (560)
T ss_pred EEEEEecccc-hhhhhhcCCC--------cccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEec
Confidence 8999999965 8988887653 25889999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+|+++.... ....+..+-|..|.|||++.|. .|+.++|+||.||||.||++|++.|.+...-+ .+..+.+..-.
T Consensus 261 DFGLAr~y~~~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGS 338 (560)
T KOG0600|consen 261 DFGLARFYTPSG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGS 338 (560)
T ss_pred cccceeeccCCC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCC
Confidence 999999876544 2335555679999999999885 59999999999999999999999998743221 11222211111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.....+. ...+..+. .......-.....+.....+....+|+..+|..||.+|.|+.+++.
T Consensus 339 P~e~~W~-~~kLP~~~------~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 339 PTEDYWP-VSKLPHAT------IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CChhccc-cccCCccc------ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111010 00000000 0000000011122223456778889999999999999999988753
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.8e-46 Score=320.70 Aligned_cols=276 Identities=19% Similarity=0.277 Sum_probs=209.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.+|...++||+|.||.||+|+ ..+|+.||||+++.... +-.....+|++.|+.++|+||+.++++|.+.+ ..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-----~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-----NL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-----ce
Confidence 468889999999999999999 67899999999985432 33456789999999999999999999986543 67
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
.||+||++ .+|...++.... .++..++..++.++++||+||| ++.|+||||||.|+|++.+|.+||+|
T Consensus 77 ~lVfEfm~-tdLe~vIkd~~i--------~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiAD 144 (318)
T KOG0659|consen 77 SLVFEFMP-TDLEVVIKDKNI--------ILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIAD 144 (318)
T ss_pred EEEEEecc-ccHHHHhccccc--------ccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeec
Confidence 89999995 599999987753 4778999999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
||+++.+........ ..+-|..|.|||.+.|. .|+..+|+||.|||+.||+.|.+-|.|..+-+ .+..+.+..-..
T Consensus 145 FGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid-QL~~If~~LGTP 221 (318)
T KOG0659|consen 145 FGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID-QLSKIFRALGTP 221 (318)
T ss_pred ccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH-HHHHHHHHcCCC
Confidence 999999876543322 22569999999998875 49999999999999999999988877644332 223333333222
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...++.+-.-+..+...+ ..+.+.... .-..+.....+|+..++.+||.+|+|++|.++.
T Consensus 222 ~~~~WP~~~~lpdY~~~~---~~P~~~~~~-----lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 222 TPDQWPEMTSLPDYVKIQ---QFPKPPLNN-----LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CcccCccccccccHHHHh---cCCCCcccc-----ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 222222211122222111 111111110 112345566899999999999999999998653
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-46 Score=355.40 Aligned_cols=256 Identities=21% Similarity=0.329 Sum_probs=206.5
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc----CC-CCchhHHHHHHHHHhcC-CCCceeeeeeeeccc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI----RP-GGSKSFKSECKAAINIK-HRNIVRVFTAFSGVD 214 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 214 (473)
...++|.+.+.||+|+||.|+.|. ..++..||+|+++.. .. ...+.+.+|+.++++++ ||||++++.++...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~- 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP- 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-
Confidence 345789999999999999999998 567899999977643 11 23456778999999999 99999999998553
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
...++|||||.||+|.+++.... .+.+.++..++.|+++|++||| ++||+||||||+|||++.+
T Consensus 93 ----~~~~ivmEy~~gGdL~~~i~~~g---------~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~ 156 (370)
T KOG0583|consen 93 ----TKIYIVMEYCSGGDLFDYIVNKG---------RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGN 156 (370)
T ss_pred ----CeEEEEEEecCCccHHHHHHHcC---------CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCC
Confidence 35899999999999999998854 3558899999999999999999 9999999999999999999
Q ss_pred -ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCC-CC-cccchhhHhHHHHHHHhCCCCCCCCCCCcccHH
Q 012014 295 -MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-AS-TYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLR 371 (473)
Q Consensus 295 -~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~ 371 (473)
+++||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||+.. +..
T Consensus 157 ~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~ 229 (370)
T KOG0583|consen 157 EGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVP 229 (370)
T ss_pred CCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHH
Confidence 999999999998764 2234455678999999999999977 75 7789999999999999999999862 111
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHH-HHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILEC-FNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
...+...... ...+... ..++..|+.+||..||.+|+|+.+|+ .-.
T Consensus 230 ~l~~ki~~~~--------------------------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~ 276 (370)
T KOG0583|consen 230 NLYRKIRKGE--------------------------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHP 276 (370)
T ss_pred HHHHHHhcCC--------------------------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hCh
Confidence 1111110000 0011112 55778999999999999999999998 555
Q ss_pred HHHH
Q 012014 451 LIRR 454 (473)
Q Consensus 451 ~l~~ 454 (473)
-++.
T Consensus 277 w~~~ 280 (370)
T KOG0583|consen 277 WFQK 280 (370)
T ss_pred hhcc
Confidence 5554
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2e-46 Score=352.78 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=199.5
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
...++|+++++||+|+||.||+|+ ..+|..+|+|++++.. .+..+..+.|-.+|...++|+||++|..|.+
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD----- 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD----- 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-----
Confidence 356899999999999999999999 5679999999998543 3455678899999999999999999999855
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
..++||||||++||++..+|...+ .|++..+..++.+++.|+..|| +.|+|||||||+|+|||..|++
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~---------~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHi 280 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKD---------TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHI 280 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcC---------cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCE
Confidence 448999999999999999998876 4668899999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCcc----------------------ccc-----c------------------ceeeccCCCCcCCCccc
Q 012014 298 HVGDFGMARFLPAI----------------------DKQ-----N------------------RFICIKGSTGYIPPEYD 332 (473)
Q Consensus 298 kl~Dfg~~~~~~~~----------------------~~~-----~------------------~~~~~~gt~~y~aPE~~ 332 (473)
||+|||+++.+... ... . ...+.+|||.|||||++
T Consensus 281 KLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVl 360 (550)
T KOG0605|consen 281 KLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVL 360 (550)
T ss_pred eeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHH
Confidence 99999998543210 000 0 01235699999999999
Q ss_pred cCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcc
Q 012014 333 LGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSA 412 (473)
Q Consensus 333 ~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.+..|+..+|+||||||+||||.|.+||.+.....+ +..++..... +
T Consensus 361 l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T-~rkI~nwr~~------l-------------------------- 407 (550)
T KOG0605|consen 361 LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET-YRKIVNWRET------L-------------------------- 407 (550)
T ss_pred hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhhh------c--------------------------
Confidence 999999999999999999999999999987543321 1111111100 0
Q ss_pred hhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 413 HASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 413 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
..+....+..+..+||.+|+. ||+.|.-
T Consensus 408 ~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 408 KFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred cCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 000111234677899999999 9999976
No 22
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.1e-46 Score=359.21 Aligned_cols=270 Identities=24% Similarity=0.316 Sum_probs=204.8
Q ss_pred ccCCCCccceeecCCCeEEEEEEe------cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL------FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 214 (473)
..++|.+.++||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++..+ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 456899999999999999999973 2356899999874322 2345688999999999 899999999987532
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCC-------------------------------------------------
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNW------------------------------------------------- 245 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------- 245 (473)
....+++|||+++|+|.+++........
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 84 ---NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 2357899999999999999975421100
Q ss_pred ----CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeecc
Q 012014 246 ----RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321 (473)
Q Consensus 246 ----~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 321 (473)
......+++.++..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++...............
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 237 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSAR 237 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCC
Confidence 000123668889999999999999999 9999999999999999999999999999998653322112222334
Q ss_pred CCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhh
Q 012014 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTM 400 (473)
Q Consensus 322 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (473)
+++.|+|||++.+..++.++|||||||++|||++ |..||.+...... +..... .....
T Consensus 238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~---~~~~~----------------- 296 (338)
T cd05102 238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRLK---DGTRM----------------- 296 (338)
T ss_pred CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHh---cCCCC-----------------
Confidence 6788999999998899999999999999999997 9999976432211 000000 00000
Q ss_pred hcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 401 CMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
..+..++..+.+|+.+||+.||++|||+.||++.|+.+..
T Consensus 297 --------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 297 --------------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011245578899999999999999999999999998864
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-46 Score=327.89 Aligned_cols=198 Identities=26% Similarity=0.386 Sum_probs=177.9
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
.++|+..+.||.|+||.|.+++ ..+|.-+|+|++++..- ...+...+|..+|+.+.||+++++++.|.+. .
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~-----~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN-----S 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-----C
Confidence 3578899999999999999999 66789999999975332 2345678999999999999999999998654 4
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
.+++||||++||.|..++++.+ .|++..+.-++.||+.||+||| +++|++|||||+|||+|.+|.+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~---------rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKi 185 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSG---------RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKI 185 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcC---------CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEE
Confidence 7899999999999999999876 4778899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
+|||+|+... ..+.+.+|||.|+|||++...+|+.++|.|||||++|||+.|.+||...
T Consensus 186 tDFGFAK~v~-----~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 186 TDFGFAKRVS-----GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred EeccceEEec-----CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 9999999763 3366789999999999999999999999999999999999999999764
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=354.55 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=210.9
Q ss_pred cccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.........+-||+|+.|.||+|++ .++.||||+++.. -..+|+-|++|+||||+.+.|+|... ..+
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqs-----Pcy 187 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQS-----PCY 187 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCC-----cee
Confidence 3333344567799999999999996 5689999987632 24678889999999999999999653 478
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
|||||||+.|-|...|+.... ++......|..+||.|+.||| .+.|||||||.-||||..+..+||+|
T Consensus 188 CIiMEfCa~GqL~~VLka~~~---------itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAGRP---------ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred EEeeeccccccHHHHHhccCc---------cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEecc
Confidence 999999999999999988763 446778899999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||.++..... .....++||..|||||++.+.+.+.|+||||||||||||+||..||.........
T Consensus 256 FGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII------------ 320 (904)
T KOG4721|consen 256 FGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII------------ 320 (904)
T ss_pred ccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE------------
Confidence 9999877553 3345678999999999999999999999999999999999999999764332210
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHhhccCCc
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRKLLETPA 461 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~~~~~~~ 461 (473)
.+.-.-++.-..+..|++.+.=|++.||+-.|..|||+.+|+..|+-....+.....
T Consensus 321 -----------------------wGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~~te 377 (904)
T KOG4721|consen 321 -----------------------WGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLSTTE 377 (904)
T ss_pred -----------------------EeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhcccH
Confidence 001111222334557899999999999999999999999999999888766655543
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.3e-46 Score=351.69 Aligned_cols=246 Identities=25% Similarity=0.393 Sum_probs=205.3
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|.+.+.||+|+||.||+|+ ..+.+.||+|.+.+.... ..+.+.+|++|++.++|||||.++++| ++..+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 478888999999999999999 667899999998754332 345689999999999999999999997 445689
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
|+|+|||.| +|..+|...+ .++++.+..++.|++.||.||| +++|+|||+||.|||++.+|++|++|
T Consensus 77 ~vVte~a~g-~L~~il~~d~---------~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~Klcd 143 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDG---------KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCD 143 (808)
T ss_pred EEEehhhhh-hHHHHHHhcc---------CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeech
Confidence 999999965 9999998776 4679999999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||+|+.... .....+...|||-|||||+..+.+|+..+|.||+||++||+++|++||... .+.+.++....+.
T Consensus 144 Fg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~ 216 (808)
T KOG0597|consen 144 FGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDP 216 (808)
T ss_pred hhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCC
Confidence 999997654 344566788999999999999999999999999999999999999999641 1222222221111
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+ ..+......+..++...|.+||..|.|..+++.
T Consensus 217 v--------------------------------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 V--------------------------------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred C--------------------------------CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 0 011245667888999999999999999999864
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-46 Score=344.29 Aligned_cols=249 Identities=22% Similarity=0.300 Sum_probs=205.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
...|...++||+|+||.||+|. ..+++.||+|++..... ...+.+++|+.++..++++||.++|+.|... ..+
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----TKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----ccH
Confidence 3457777999999999999999 66789999999986543 3457789999999999999999999998653 378
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+++||||.||++.+.++.... +.+..+.-++++++.||.||| .++.+|||||+.|||+..+|.+||+|
T Consensus 87 wiiMey~~gGsv~~lL~~~~~---------~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~D 154 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI---------LDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLAD 154 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC---------CccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEe
Confidence 999999999999999987653 235556668999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||.+..+..... ...++.||+.|||||++.+..|+.|+||||||++.+||++|.+|+........ ...+|..
T Consensus 155 fgVa~ql~~~~~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------lflIpk~ 226 (467)
T KOG0201|consen 155 FGVAGQLTNTVK--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------LFLIPKS 226 (467)
T ss_pred cceeeeeechhh--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------EEeccCC
Confidence 999987755432 22567899999999999988999999999999999999999999987544221 1112222
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....++ ..+...+++++..||++||+.||||.++++
T Consensus 227 ~PP~L~------------------------------~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 227 APPRLD------------------------------GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCCccc------------------------------cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 222222 135667899999999999999999999875
No 27
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=340.37 Aligned_cols=261 Identities=20% Similarity=0.299 Sum_probs=199.7
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--------------CCchhHHHHHHHHHhcCCCCceee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--------------GGSKSFKSECKAAINIKHRNIVRV 206 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~ 206 (473)
...|+|++.+.||+|.||.|-+|. ..+++.||||++.+... ...+...+|+.+|+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456889999999999999999999 56799999999964221 112478899999999999999999
Q ss_pred eeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 012014 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKP 286 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp 286 (473)
+.+..+.. ...+|||+|||..|.+...=... ..+++.++++++++++.||+||| .+|||||||||
T Consensus 174 iEvLDDP~---s~~~YlVley~s~G~v~w~p~d~---------~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKP 238 (576)
T KOG0585|consen 174 IEVLDDPE---SDKLYLVLEYCSKGEVKWCPPDK---------PELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKP 238 (576)
T ss_pred EEeecCcc---cCceEEEEEeccCCccccCCCCc---------ccccHHHHHHHHHHHHHHHHHHH---hcCeeccccch
Confidence 99976543 56789999999888774321111 12779999999999999999999 99999999999
Q ss_pred CcEEecCCccEEEeecccccccCcccc---ccceeeccCCCCcCCCccccCCC----CCcccchhhHhHHHHHHHhCCCC
Q 012014 287 SNVLLDDEMIGHVGDFGMARFLPAIDK---QNRFICIKGSTGYIPPEYDLGCE----ASTYGDVYSFGILLLEMFTGIRP 359 (473)
Q Consensus 287 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~P 359 (473)
+|+|++++|++||+|||.+........ ........|||.|+|||...++. -+.+.||||+||+||.|+.|+.|
T Consensus 239 sNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 239 SNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred hheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCC
Confidence 999999999999999999987633211 11223367999999999987732 35677999999999999999999
Q ss_pred CCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCC
Q 012014 360 SDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRER 439 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 439 (473)
|.+.+.-+ .+ ..+....+ ..+...+....+.+|+.++|.+||+.|
T Consensus 319 F~~~~~~~----l~---------~KIvn~pL----------------------~fP~~pe~~e~~kDli~~lL~KdP~~R 363 (576)
T KOG0585|consen 319 FFDDFELE----LF---------DKIVNDPL----------------------EFPENPEINEDLKDLIKRLLEKDPEQR 363 (576)
T ss_pred cccchHHH----HH---------HHHhcCcc----------------------cCCCcccccHHHHHHHHHHhhcChhhe
Confidence 97532111 00 11111100 001112456688899999999999999
Q ss_pred CChHHHHHHHHHH
Q 012014 440 MKINDVESRLRLI 452 (473)
Q Consensus 440 Pt~~ev~~~L~~l 452 (473)
.+..+|....--.
T Consensus 364 i~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 364 ITLPDIKLHPWVT 376 (576)
T ss_pred eehhhheecceec
Confidence 9999987655433
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-44 Score=338.03 Aligned_cols=251 Identities=21% Similarity=0.315 Sum_probs=199.6
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC---chhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
...||+|++|.||+|.. +|+.||||.++...... .+.+.+|+.++.+++||||+++++++.+.. ......++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 36799999999999986 78999999997544333 356789999999999999999999986521 22346799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
|+++|+|.+++.... .+++.....++.|++.||.||| + .+++||||||+||++++++.+||+|||++
T Consensus 103 y~~~g~L~~~l~~~~---------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~ 170 (283)
T PHA02988 103 YCTRGYLREVLDKEK---------DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLE 170 (283)
T ss_pred eCCCCcHHHHHhhCC---------CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchH
Confidence 999999999997654 3557888999999999999999 6 48999999999999999999999999999
Q ss_pred cccCccccccceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+...... ....||..|+|||++.+ ..++.++|||||||++|||++|..||.+.... ............
T Consensus 171 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-----~~~~~i~~~~~~ 240 (283)
T PHA02988 171 KILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-----EIYDLIINKNNS 240 (283)
T ss_pred hhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhcCCC
Confidence 8653321 23457899999999876 67999999999999999999999999754211 111111000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
...+..++..+.+|+.+||+.||++|||++||++.|+.++.
T Consensus 241 ------------------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 241 ------------------------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ------------------------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 00111356688999999999999999999999999998853
No 29
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=329.25 Aligned_cols=290 Identities=20% Similarity=0.269 Sum_probs=215.4
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEee--ccCCCCchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
+.......|...+.||+|+||.|+.|. ..+|+.||||++. .......++..+|+++|+.++|+||+.+++++.....
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 444556677778999999999999998 6689999999987 3444456778899999999999999999999977555
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
..-...|+|+|+| +.+|.+.++... .++...+..++.||++||.|+| +.+|+||||||+|+|++.+.
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~~---------~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c 162 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQQ---------DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADC 162 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcCc---------cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCC
Confidence 6677899999999 779999998875 3668888999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 296 IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
.+||+|||+|+...........+...-|..|.|||++.. ..|+.+.||||.|||+.||++|++-|.|...-. .+..+
T Consensus 163 ~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~-Ql~lI- 240 (359)
T KOG0660|consen 163 DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH-QLQLI- 240 (359)
T ss_pred CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH-HHHHH-
Confidence 999999999998754322233344557999999998765 569999999999999999999999998743221 11212
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+..-.+.+............+..+...... ....-........+|+.+||..||.+|+|++|.++
T Consensus 241 ~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~----f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 241 LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP----FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC----HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 2222211111111111111111111111111111 11222345667889999999999999999999865
No 30
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-45 Score=353.20 Aligned_cols=244 Identities=23% Similarity=0.271 Sum_probs=201.0
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 216 (473)
...++|...++||+|+||.|+++. ..+++.+|||++++.. ..+.+....|.+|+...+ ||++++++.+| +
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f-----Q 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF-----Q 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----c
Confidence 345789999999999999999999 5678999999998543 445677889999988775 99999999997 4
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
+..++|+||||+.||++..+.+.. .|++..+.-+++.|+.||.||| ++||||||||.+|||+|.+|+
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~~~~----------~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHIHTD----------VFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEEecc----------cccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCc
Confidence 556899999999999955444433 4779999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
+||+|||+++..- .....+.+++|||.|||||++.+..|+.++|+|||||+||||+.|..||.+....
T Consensus 507 ~kiADFGlcKe~m--~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------- 574 (694)
T KOG0694|consen 507 VKIADFGLCKEGM--GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------- 574 (694)
T ss_pred EEecccccccccC--CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----------
Confidence 9999999998643 2345667889999999999999999999999999999999999999999874322
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
++.+..+.... -.+..++.+..+++.+.|..||++|.-+
T Consensus 575 -------e~FdsI~~d~~--------------------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 -------EVFDSIVNDEV--------------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHHHhcCCC--------------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12221111110 0122356678899999999999999866
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-45 Score=349.66 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=207.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
.+-|++++.||.|+-|.|-+|+ ..+|+.+|||++.+.. ......+.+|+.+|+.+.|||++++|+++ ++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCc
Confidence 3568899999999999999999 5689999999997542 22345688999999999999999999996 4456
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
++|+|.||+++|.|++++..++ .+++.++.+++.||+.|+.|+| ..+|+||||||+|+|+|..+++||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG---------~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKI 153 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKG---------PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKI 153 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhC---------CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEee
Confidence 8999999999999999998887 4668999999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCC-CcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+|..-.. .....+.||+|.|.|||++.|.+| +.++||||.|||||.|+||+.||++ .+++..+....
T Consensus 154 ADFGMAsLe~~---gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlKV~ 225 (786)
T KOG0588|consen 154 ADFGMASLEVP---GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLKVQ 225 (786)
T ss_pred eccceeecccC---CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHHHH
Confidence 99999976432 344556789999999999999887 5789999999999999999999984 33444332221
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.+. .+.+...+.+..+|+.+|+..||+.|.|++||++.
T Consensus 226 ~G~--------------------------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 226 RGV--------------------------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCc--------------------------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 111 11223456677899999999999999999999764
No 32
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-45 Score=374.14 Aligned_cols=278 Identities=24% Similarity=0.351 Sum_probs=219.1
Q ss_pred cCCCCccceeecCCCeEEEEEEecC--CC----EEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD--GT----TIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 216 (473)
..+......||+|+||.||.|...+ +. .||+|.++... ......|.+|..+|+.++|||||+++|++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 3445677889999999999998432 33 48889887543 34456799999999999999999999999763
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
...+|++|||++|+|..||++.+.....+ ..++..+.+.++.|||+|+.||+ ++++|||||..+|+|++....
T Consensus 768 --~~~~i~leyM~gGDL~sflr~~r~~~~~~--~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~ 840 (1025)
T KOG1095|consen 768 --GPPLILLEYMEGGDLLSFLRESRPAPFQP--SNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRV 840 (1025)
T ss_pred --CCcEEEehhcccCcHHHHHHhcccccCCC--CCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCc
Confidence 36799999999999999999886554442 35778999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~ 375 (473)
+||+|||+|+.+-..+.........-...|||||.+..+.++.|+|||||||++||++| |..||.+..+.+.. .
T Consensus 841 VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~--~--- 915 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL--L--- 915 (1025)
T ss_pred EEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH--H---
Confidence 99999999995433221111111112357999999999999999999999999999999 99999864332210 0
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
....+. +-+.+..|+..++++|..||+.+|++||++..|++++..+...
T Consensus 916 ~~~~gg-------------------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 916 DVLEGG-------------------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHHhCC-------------------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 000000 1223457999999999999999999999999999999999887
Q ss_pred hccCCcccccCC
Q 012014 456 LLETPACLEVKQ 467 (473)
Q Consensus 456 ~~~~~~~~~~~~ 467 (473)
............
T Consensus 965 ~~~~~~~~~~a~ 976 (1025)
T KOG1095|consen 965 ALGTIYGPLPAD 976 (1025)
T ss_pred hccCcccccccc
Confidence 776655444333
No 33
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-45 Score=329.37 Aligned_cols=248 Identities=20% Similarity=0.324 Sum_probs=207.1
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
...+|++.+.||+|.||.|-+|. ...|+.||||.+++... .+.-.+++|++||+.|+||||+.+|.+|.. .
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN-----k 125 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN-----K 125 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC-----C
Confidence 34679999999999999999998 57899999999975433 334568899999999999999999999854 4
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
....|||||..+|.|.+|+...+ .+++.++..+++||.+|+.|+| .++++|||||.+|||+|.++++|
T Consensus 126 dKIvivMEYaS~GeLYDYiSer~---------~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISERG---------SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHhc---------cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCee
Confidence 47899999999999999998876 5779999999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCC-CcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++..+.. .....+++|+|-|.+||+..+.+| ++.+|-|||||+||-|+.|..||+|.. ...+++..
T Consensus 194 IADFGLSNly~~---~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQI 265 (668)
T KOG0611|consen 194 IADFGLSNLYAD---KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQI 265 (668)
T ss_pred eeccchhhhhcc---ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHh
Confidence 999999987754 344567889999999999999887 578999999999999999999999842 22222222
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
..+...+ ++.+....-||.+||..||++|-|+.+|+..
T Consensus 266 s~GaYrE---------------------------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 266 SRGAYRE---------------------------------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred hcccccC---------------------------------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 2111111 1234455679999999999999999998764
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-44 Score=320.54 Aligned_cols=278 Identities=21% Similarity=0.228 Sum_probs=206.0
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+.|+..+.|++|+||.||+|+ ..+++.||+|+++... .+..-.-.+|+.+|.+++|||||.+-.+..+.+. ..
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~---d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM---DK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc---ce
Confidence 3568889999999999999999 6779999999998433 2223346899999999999999999999887553 35
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.|+|||||+. +|..++..... .|+..++..++.|+++|++||| .+.|+||||||+|+|+++.|.+||+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q--------~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKia 219 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQ--------PFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIA 219 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccC--------CCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEec
Confidence 8999999965 99999987652 4778999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc-
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL- 378 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~- 378 (473)
|||+|+.++... ...+...-|..|.|||.+.+.. |+++.|+||+|||+.||+++++-|.|...-+. +..+.+..-
T Consensus 220 DFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ-l~~If~llGt 296 (419)
T KOG0663|consen 220 DFGLAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ-LDKIFKLLGT 296 (419)
T ss_pred ccchhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH-HHHHHHHhCC
Confidence 999999886642 2344455699999999988864 99999999999999999999999988544332 222222221
Q ss_pred C-cc-hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHH-HHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 P-QR-AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILE-CFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
| +. +...........+... ...-..++..+... ..+.-.+|+...|.+||.+|.|+.|-++
T Consensus 297 Pte~iwpg~~~lp~~k~~~f~--------~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 297 PSEAIWPGYSELPAVKKMTFS--------EHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccCCCccccchhhccccC--------CCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1 11 1111110000000000 00000111111111 3456678999999999999999998754
No 35
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-45 Score=329.07 Aligned_cols=285 Identities=21% Similarity=0.256 Sum_probs=206.7
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
.|...+++|.|+||.||+|. ..+++.||||++-.. .+.-.+|+++|+.++|||||++..+|......+.-+..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 46778999999999999999 456799999997532 2233579999999999999999998876543324467799
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-ccEEEeecc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-MIGHVGDFG 303 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-~~~kl~Dfg 303 (473)
|||++. +|.++++.....+ ..++.-.+.-+..||.+||.||| +.||+||||||.|+|+|.+ |.+||||||
T Consensus 101 leymP~-tL~~~~r~~~~~~-----~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRAN-----QRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHhchH-HHHHHHHHHhhcC-----CCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCC
Confidence 999976 9999998532111 13445667779999999999999 8999999999999999976 899999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
.|+.+........ ...|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.|.. +...+..+++..-.+..
T Consensus 172 SAK~L~~~epniS---YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 172 SAKVLVKGEPNIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTR 247 (364)
T ss_pred cceeeccCCCcee---EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCH
Confidence 9998876554432 3358999999998875 59999999999999999999999999843 33445555555443333
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH--HHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES--RLRLIRR 454 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~l~~ 454 (473)
+++..-..... + ...+......+.. -.....+++..+|+.++|.++|.+|.|+.|++. ....++.
T Consensus 248 e~I~~mn~~y~-~---~~~p~ik~~~~~~---~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 248 EDIKSMNPNYT-E---FKFPQIKAHPWHK---VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred HHHhhcCcccc-c---ccCccccccccee---ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 33221110000 0 0000011111000 122346778899999999999999999998873 3444443
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.5e-44 Score=348.08 Aligned_cols=268 Identities=24% Similarity=0.293 Sum_probs=202.6
Q ss_pred cccCCCCccceeecCCCeEEEEEEe------cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeecc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTL------FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGV 213 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 213 (473)
...++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+.++..+ +||||++++++|.+.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 3456799999999999999999963 235689999987432 22345688999999999 899999999998553
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCC------------------------------------------------
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW------------------------------------------------ 245 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------ 245 (473)
...++|||||++|+|.+++........
T Consensus 112 -----~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T cd05104 112 -----GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR 186 (375)
T ss_pred -----CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence 357999999999999999975431100
Q ss_pred ------------------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccc
Q 012014 246 ------------------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307 (473)
Q Consensus 246 ------------------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 307 (473)
......+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCcccee
Confidence 000123668889999999999999999 99999999999999999999999999999986
Q ss_pred cCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhc
Q 012014 308 LPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVV 386 (473)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (473)
..............++..|+|||++.+..++.++|||||||++|||++ |..||........ +...+......
T Consensus 264 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~------ 336 (375)
T cd05104 264 IRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMIKEGYRM------ 336 (375)
T ss_pred ccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHHHhCccC------
Confidence 543322111122335677999999999999999999999999999998 8999876432211 11111100000
Q ss_pred cccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 387 DDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..+...+.++.+|+.+||+.||++|||+.||++.|+..
T Consensus 337 ----------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 ----------------------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00011345788999999999999999999999999863
No 37
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-45 Score=349.16 Aligned_cols=270 Identities=23% Similarity=0.352 Sum_probs=213.2
Q ss_pred chhhhhcccCCCCccceeecCCCeEEEEEEecC--C---CEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeee
Q 012014 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD--G---TTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVF 207 (473)
Q Consensus 136 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~ 207 (473)
.-+.|+...++-...++||+|+||.||+|.+.. + ..||+|..+... ......|.+|+++|++++|||||++|
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 344566677778888999999999999998432 2 238999987422 34456799999999999999999999
Q ss_pred eeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 012014 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287 (473)
Q Consensus 208 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 287 (473)
|++... ..+++|||+|+||+|.++|+.... .++..+++.++.+.|.||+||| ++++|||||-.+
T Consensus 228 GVa~~~-----~Pl~ivmEl~~gGsL~~~L~k~~~--------~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAAR 291 (474)
T KOG0194|consen 228 GVAVLE-----EPLMLVMELCNGGSLDDYLKKNKK--------SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAAR 291 (474)
T ss_pred EEEcCC-----CccEEEEEecCCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHH
Confidence 998653 367999999999999999998764 3668999999999999999999 999999999999
Q ss_pred cEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCC
Q 012014 288 NVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTG 366 (473)
Q Consensus 288 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~ 366 (473)
|+|++.++.+||+|||+++.-....... ....-...|+|||.+....|+.++|||||||++||+++ |..||.+....
T Consensus 292 NcL~~~~~~vKISDFGLs~~~~~~~~~~--~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~ 369 (474)
T KOG0194|consen 292 NCLYSKKGVVKISDFGLSRAGSQYVMKK--FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY 369 (474)
T ss_pred HheecCCCeEEeCccccccCCcceeecc--ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH
Confidence 9999999999999999987543111111 01123578999999999999999999999999999999 89999875432
Q ss_pred cccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 367 KMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
+ ....+. ..+.++ ..+...+..+..++..||..||++||||.++.
T Consensus 370 ~--v~~kI~-------------------~~~~r~--------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 370 E--VKAKIV-------------------KNGYRM--------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred H--HHHHHH-------------------hcCccC--------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence 1 111110 000100 11224577888999999999999999999999
Q ss_pred HHHHHHHHhhcc
Q 012014 447 SRLRLIRRKLLE 458 (473)
Q Consensus 447 ~~L~~l~~~~~~ 458 (473)
+.|+.+......
T Consensus 415 ~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 415 KKLEALEKKKEA 426 (474)
T ss_pred HHHHHHHhcccc
Confidence 999999876553
No 38
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.7e-44 Score=348.01 Aligned_cols=269 Identities=24% Similarity=0.323 Sum_probs=203.3
Q ss_pred hcccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeec
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSG 212 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 212 (473)
....++|++.+.||+|+||.||+|+.. ++..||+|+++.... .....+.+|+.+++.+ +||||++++++|.+
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 344567999999999999999998731 235799999874332 2345688999999999 89999999999854
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCC------------------------------------------------
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN------------------------------------------------ 244 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------------------------------------------------ 244 (473)
. ...++||||+++|+|.+++.......
T Consensus 114 ~-----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 114 G-----GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred C-----CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 3 36799999999999999986432100
Q ss_pred -------------CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCcc
Q 012014 245 -------------WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311 (473)
Q Consensus 245 -------------~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 311 (473)
.......+++.+++.++.||+.||.||| +++|+||||||+|||+++++.+||+|||+++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~ 265 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMND 265 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCC
Confidence 0011124678889999999999999999 999999999999999999999999999999865432
Q ss_pred ccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccccc
Q 012014 312 DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFN 390 (473)
Q Consensus 312 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (473)
..........++..|+|||++.+..++.++|||||||++|+|++ |..||....... .+...........
T Consensus 266 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~~--------- 335 (374)
T cd05106 266 SNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQMS--------- 335 (374)
T ss_pred cceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCcc---------
Confidence 21111122235678999999988899999999999999999997 999997643221 1111111000000
Q ss_pred hHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 391 LQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.+...+.++.+++.+||+.||++|||+.+|++.|+.+
T Consensus 336 -------------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 336 -------------------------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred -------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011245788999999999999999999999999986
No 39
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=307.64 Aligned_cols=249 Identities=22% Similarity=0.369 Sum_probs=207.3
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..++|++++.||+|.||.||.|+ ..++..||+|++.+. ......++.+|++|-+.|+||||+++|++|.+ .
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-----~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-----S 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-----c
Confidence 45789999999999999999999 667889999998643 23445678999999999999999999999865 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...||++||.++|+|...|...... .|.+.....++.|+|.||.|+| .+++|||||||+|+|++..+.+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~~-------~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lk 164 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRMK-------RFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELK 164 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcccc-------cccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCee
Confidence 4789999999999999999855433 3667888899999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||.+...+ .....+.+||..|.+||+..+..++..+|+|++|++.||++.|.+||.... ....+..+.+...
T Consensus 165 iAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~ 239 (281)
T KOG0580|consen 165 IADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDL 239 (281)
T ss_pred ccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHccc
Confidence 99999997543 344566789999999999999999999999999999999999999998754 2222222222111
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. .+...+....+|+.+|+..+|.+|.+..|++.
T Consensus 240 ~------------------------------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 240 K------------------------------------FPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred c------------------------------------CCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 0 11234557778999999999999999999875
No 40
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.7e-43 Score=337.39 Aligned_cols=270 Identities=21% Similarity=0.270 Sum_probs=199.8
Q ss_pred cCCCCccceeecCCCeEEEEEEecC-----------------CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD-----------------GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVR 205 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 205 (473)
.++|.+.++||+|+||.||+|.+.+ +..||+|.+..... .....+.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4578899999999999999997432 34699999874322 22356889999999999999999
Q ss_pred eeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC----------CCcchhhcHHHHHHHHHHHHHHHHHHhhCC
Q 012014 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW----------RPLNFNFLIKKKLDIAIDVACALRYLHCDC 275 (473)
Q Consensus 206 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~----------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~ 275 (473)
+++++.+. ...++||||+++|+|.+++........ ......+++..+..++.||+.||.|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH--- 155 (304)
T cd05096 84 LLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS--- 155 (304)
T ss_pred EEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---
Confidence 99998653 357999999999999999865432110 011124667889999999999999999
Q ss_pred CCCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh
Q 012014 276 QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355 (473)
Q Consensus 276 ~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 355 (473)
+++|+||||||+|||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++
T Consensus 156 ~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 156 SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 89999999999999999999999999999986543322112222345788999999988889999999999999999987
Q ss_pred --CCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhccc
Q 012014 356 --GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSA 433 (473)
Q Consensus 356 --g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 433 (473)
+..||.+....+ ................. ...+..++..+.+|+.+||+
T Consensus 236 ~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~cl~ 286 (304)
T cd05096 236 LCKEQPYGELTDEQ--VIENAGEFFRDQGRQVY---------------------------LFRPPPCPQGLYELMLQCWS 286 (304)
T ss_pred ccCCCCCCcCCHHH--HHHHHHHHhhhcccccc---------------------------ccCCCCCCHHHHHHHHHHcc
Confidence 567776542211 01100000000000000 00012346688999999999
Q ss_pred CCCCCCCChHHHHHHHH
Q 012014 434 ERPRERMKINDVESRLR 450 (473)
Q Consensus 434 ~dP~~RPt~~ev~~~L~ 450 (473)
.||++|||+.||.+.|+
T Consensus 287 ~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 287 RDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCchhCcCHHHHHHHHh
Confidence 99999999999988875
No 41
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.5e-43 Score=331.96 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=196.2
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.|+..+.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.++.+++|+||+++++++.+. ...
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-----CeE
Confidence 37788999999999999998 5679999999986432 12234578899999999999999999987543 368
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++|+|.+++...... .+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~D 145 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNP-------GFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISD 145 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEee
Confidence 9999999999999888643321 3568889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... ......||..|+|||++.+..++.++|||||||++|+|++|..||.+...... ...... .....
T Consensus 146 fg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~-~~~~~ 220 (285)
T cd05631 146 LGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDR-RVKED 220 (285)
T ss_pred CCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHH-Hhhcc
Confidence 99998654322 22334689999999999999999999999999999999999999986432110 000000 00000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
.. ......+..+.+|+.+||+.||.+||| ++++++
T Consensus 221 ~~-------------------------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 QE-------------------------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cc-------------------------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00 001124557889999999999999997 677765
No 42
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-44 Score=337.69 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=210.2
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|..++++|+|+||.++.++ ..+++.+++|.+...... ..+...+|+.+++++.|||||.+.+.|.. +....
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~----~~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE----DGQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc----CCceE
Confidence 578999999999999999998 557889999999854433 34467899999999999999999999854 34568
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+|||+||+||+|.+.|.+.... .|+++.+..++.|++.|+.||| +++|+|||||+.|||++.++.+||+|
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~-------~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgD 149 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGV-------LFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGD 149 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhc-------cccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecc
Confidence 9999999999999999887632 5789999999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||+|+.+.... ....+..||+.||+||++.+.+|+.|+|||||||++|||++-+++|.... ....+.......
T Consensus 150 fGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~~~ 222 (426)
T KOG0589|consen 150 FGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINRGL 222 (426)
T ss_pred hhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhhcc
Confidence 99999886643 23445679999999999999999999999999999999999999998632 222221111111
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. .+.+.....++..|+..|+..+|..||++.+++..
T Consensus 223 ~-------------------------------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 Y-------------------------------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred C-------------------------------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 0 01123456788899999999999999999999987
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5e-44 Score=338.71 Aligned_cols=245 Identities=24% Similarity=0.320 Sum_probs=195.8
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 4788999999999999999994 468999999986432 1234568899999999999999999988644 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~ 143 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG---------RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLT 143 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEE
Confidence 899999999999999997654 3557888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .........
T Consensus 144 Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~ 213 (291)
T cd05612 144 DFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKILAG 213 (291)
T ss_pred ecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhC
Confidence 99999865321 22346899999999999988999999999999999999999999753211 111110000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVESR 448 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 448 (473)
.. ..+......+.+|+.+||+.||.+||+ ++|+++.
T Consensus 214 ~~--------------------------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 214 KL--------------------------------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred Cc--------------------------------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00 001122456789999999999999995 7777643
No 44
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.9e-43 Score=342.43 Aligned_cols=280 Identities=18% Similarity=0.235 Sum_probs=200.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.++||+|+||.||+|. ..+++.||+|+++... ......+.+|+.+++.++||||+++++++...+.......+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47889999999999999998 4578999999986422 22345688999999999999999999988654434445689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+ +++|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 81 lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Df 147 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND---------DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDF 147 (338)
T ss_pred EEEecC-CCCHHHHHHhcc---------cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccC
Confidence 999999 579999987553 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccc-cceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|+++........ .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+..... .+ ..+.....
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-~~-~~~~~~~~ 225 (338)
T cd07859 148 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QL-DLITDLLG 225 (338)
T ss_pred ccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HH-HHHHHHhC
Confidence 999764332211 12233468999999999876 578999999999999999999999997642211 01 11111111
Q ss_pred cch----hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 380 QRA----EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 380 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
... ..+........+.. . .. .............+..+.+++.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~~~~~i~~~~~~~~~~~---~--~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 226 TPSPETISRVRNEKARRYLSS---M--RK---KQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCHHHHHHhhhhhHHHHHHh---h--cc---cCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 01100000000000 0 00 00000001111245677899999999999999999999853
No 45
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=305.86 Aligned_cols=271 Identities=19% Similarity=0.201 Sum_probs=216.1
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
..+.++|.+.+.||+|||+-||+++ ..+++.+|+|++......+.+...+|++..++++|||+++++++......+...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4456789999999999999999999 778999999999877767788899999999999999999999998766666778
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCcEEecCCccE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPP--IAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~Nil~~~~~~~ 297 (473)
..||+++|...|+|.+.+........ .+++.+.+.|+.+|++||++|| ... +.||||||.|||+.+++.+
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~-----~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGN-----FVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCC-----ccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCce
Confidence 89999999999999999976543321 4779999999999999999999 665 9999999999999999999
Q ss_pred EEeecccccccCcccccc-------ceeeccCCCCcCCCccccC---CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc
Q 012014 298 HVGDFGMARFLPAIDKQN-------RFICIKGSTGYIPPEYDLG---CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~ 367 (473)
+|.|||.++...-..... .......|..|.|||.+.- ...+.++|||||||+||.|+.|..||+......
T Consensus 169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G 248 (302)
T KOG2345|consen 169 VLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG 248 (302)
T ss_pred EEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC
Confidence 999999987653321111 1122346899999998763 457899999999999999999999997643322
Q ss_pred ccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 368 MNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+.- .+..... ..+.....++.+.+|+.+|++.||.+||++.+++.
T Consensus 249 gSlaL-----------Av~n~q~----------------------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 249 GSLAL-----------AVQNAQI----------------------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred CeEEE-----------eeecccc----------------------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 11000 0000000 00001125778999999999999999999999999
Q ss_pred HHHHH
Q 012014 448 RLRLI 452 (473)
Q Consensus 448 ~L~~l 452 (473)
.++.+
T Consensus 296 ~~d~L 300 (302)
T KOG2345|consen 296 KLDDL 300 (302)
T ss_pred HHHhh
Confidence 99876
No 46
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4e-43 Score=334.64 Aligned_cols=280 Identities=21% Similarity=0.287 Sum_probs=198.4
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..++|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.+++.++||||+++++++.+. ..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 77 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK-----ET 77 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC-----Ce
Confidence 457899999999999999999994 4789999999874332 2334678999999999999999999998543 46
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||++ ++|.+++..... .++...+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~ 145 (303)
T cd07869 78 LTLVFEYVH-TDLCQYMDKHPG--------GLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLA 145 (303)
T ss_pred EEEEEECCC-cCHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEC
Confidence 899999994 688888865432 2557888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..+....+.........
T Consensus 146 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (303)
T cd07869 146 DFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGT 223 (303)
T ss_pred CCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCC
Confidence 999987543221 12233458999999999865 458889999999999999999999998754322222222211111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhh--HHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHAS--IILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..............+ ..+............ .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 224 PNEDTWPGVHSLPHF------KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChhhccchhhcccc------ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000000000 000000000000000 00112356789999999999999999999875
No 47
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-42 Score=341.04 Aligned_cols=276 Identities=20% Similarity=0.187 Sum_probs=199.9
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|++.+.||+|+||.||+|. ..+++.||+|... ...+.+|+.++++++||||++++++|... ...+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYN-----KFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC-----CeeE
Confidence 3579999999999999999998 4678999999743 34578999999999999999999998543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|||++ +++|..++.... .+++.+++.++.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 160 lv~e~~-~~~L~~~l~~~~---------~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAKR---------NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred EEEecC-CCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeC
Confidence 999999 578999886653 3558889999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCC------cccHHHHHHh
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG------KMNLRNFVKM 376 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~------~~~~~~~~~~ 376 (473)
|+++...... ........||+.|+|||++.+..++.++|||||||++|||++|..||...... ...+...+..
T Consensus 227 G~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 227 GAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred Cccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 9997543221 22233456999999999999989999999999999999999999887543211 1122222221
Q ss_pred hcCcchhhhccc--cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDD--FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+.......+. .+...+.. ..............+......+.++.+|+.+||+.||++|||+.|+++
T Consensus 306 ~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 306 SGTHPNEFPIDAQANLDEIYIG---LAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhcCcchhHHHHHHHHH---HHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 111000000000 00000000 000000001111112233356778999999999999999999999974
No 48
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.2e-43 Score=330.88 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=200.0
Q ss_pred CCCCccceeecCCCeEEEEEEe--cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhc---CCCCceeeeeeeeccccCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL--FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINI---KHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 217 (473)
++|++.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+.++..+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 4688999999999999999984 3468899999874332 2234567788877766 6999999999986443344
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++||||++ ++|.+++...... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~-------~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~ 149 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEP-------GVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQI 149 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCE
Confidence 556899999995 6999998754322 3568899999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|.+||.+....+ .+.......
T Consensus 150 kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~ 225 (290)
T cd07862 150 KLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVI 225 (290)
T ss_pred EEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHh
Confidence 99999999865432 22234458999999999988889999999999999999999999998643321 122222111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
............... . ..................+..+.+|+.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 226 GLPGEEDWPRDVALP---R------QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCChhhchhhhccc---c------hhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 100000000000000 0 000000000011112235667889999999999999999999974
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-43 Score=342.17 Aligned_cols=245 Identities=22% Similarity=0.272 Sum_probs=195.8
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
.++|.+.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.++.+++||||+++++++.+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-----N 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC-----C
Confidence 46789999999999999999994 468999999987432 23345688999999999999999999998543 4
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl 159 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAG---------RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKV 159 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEE
Confidence 6899999999999999997654 3557888889999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ........
T Consensus 160 ~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~~i~~ 229 (329)
T PTZ00263 160 TDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RIYEKILA 229 (329)
T ss_pred eeccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HHHHHHhc
Confidence 999999865332 12346899999999999988999999999999999999999999653211 11110000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
... ..+......+.+|+.+||+.||.+||+ +.+++.
T Consensus 230 ~~~--------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 230 GRL--------------------------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred CCc--------------------------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 000 000112346779999999999999997 566653
No 50
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.2e-43 Score=329.64 Aligned_cols=278 Identities=19% Similarity=0.197 Sum_probs=199.7
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.++..++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 4789999999999999999995 468899999997532 2234568899999999999999999998754 3468
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||++++++..+..... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~D 143 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPN---------GVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCD 143 (287)
T ss_pred EEEEecCCCCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEee
Confidence 99999999877765543322 3568889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC--
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP-- 379 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~-- 379 (473)
||++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+. +........+
T Consensus 144 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 221 (287)
T cd07848 144 FGFARNLSEGS-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLP 221 (287)
T ss_pred ccCcccccccc-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCC
Confidence 99998764322 1122234689999999999988899999999999999999999999976432211 1111111100
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......... ..+.. ....................+..+.+|+.+||+.||++|||++|+++
T Consensus 222 ~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 222 AEQMKLFYSN--PRFHG----LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHhhhcc--chhcc----cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 00000 00000000000111112235678999999999999999999999874
No 51
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.5e-43 Score=340.41 Aligned_cols=241 Identities=18% Similarity=0.227 Sum_probs=191.3
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
++||+|+||.||+|. ..+|+.||+|+++... ......+.+|+.++.+++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 469999999999998 4578999999997432 2233567889999999999999999998754 347899999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|.+++.... .+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++
T Consensus 76 ~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 76 YANGGELFFHLSRER---------VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 999999999987654 3568889999999999999999 9999999999999999999999999999987
Q ss_pred ccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhc
Q 012014 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVV 386 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (473)
..... ........||+.|+|||++.+..++.++|||||||++|||++|..||.+.... ...........
T Consensus 144 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~~~~~~~---- 212 (323)
T cd05571 144 EGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEI---- 212 (323)
T ss_pred ccccC--CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HHHHHHHcCCC----
Confidence 53221 12223456999999999999989999999999999999999999999652211 11110000000
Q ss_pred cccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 387 DDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..+...+..+.+|+.+||+.||++|| ++.++++
T Consensus 213 ----------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 ----------------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00112355778999999999999999 7888864
No 52
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=313.03 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=201.1
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeec--cCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++.|++.++||+|.|+.|+++. ..+|+.+|+|+++. .+..+.+.+.+|++|-+.|+|||||++.+.+ ....+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccce
Confidence 4678889999999999999987 56799999998863 3445677899999999999999999999885 44568
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec---CCccE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIG 297 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~---~~~~~ 297 (473)
.++|+|++.|++|..-|-.. +.+++..+..+++||++||.|+| .++|||||+||+|+++. ..--+
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R---------~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~v 152 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAR---------EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAV 152 (355)
T ss_pred eEEEEecccchHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCce
Confidence 89999999999998766543 25788999999999999999999 99999999999999994 34578
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
||+|||++..+. .+.......|||+|||||++...+|+..+|||+.|||||-|+.|.+||.+..... .+.++....
T Consensus 153 KL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-lye~I~~g~ 228 (355)
T KOG0033|consen 153 KLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYEQIKAGA 228 (355)
T ss_pred eecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-HHHHHhccc
Confidence 999999999876 2445566789999999999999999999999999999999999999998632221 111111111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
..-.. ..-....++..+|+.+||..||.+|.|+.|.+
T Consensus 229 yd~~~--------------------------------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 229 YDYPS--------------------------------PEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred cCCCC--------------------------------cccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 00000 00112455778899999999999999998865
No 53
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8e-43 Score=329.39 Aligned_cols=263 Identities=23% Similarity=0.418 Sum_probs=203.5
Q ss_pred CCCCccceeecCCCeEEEEEEecC-C-----CEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFD-G-----TTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
++|++.+.||+|+||.||+|.... + ..||+|.++.... .....+.+|+.++..++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE---- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----
Confidence 478889999999999999998432 2 5799998864322 2235688999999999999999999997542
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCC-------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWR-------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
...+++|||+++|+|.+++......... .....+++.+++.++.|++.||.||| +++++||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil 156 (283)
T cd05048 81 -QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCL 156 (283)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEE
Confidence 3579999999999999999765332110 11124678889999999999999999 999999999999999
Q ss_pred ecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCccc
Q 012014 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMN 369 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~ 369 (473)
+++++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-- 234 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-- 234 (283)
T ss_pred EcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999976543322222233446788999999988889999999999999999998 999997643211
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
+...+. .... ...+..++..+.+|+.+||+.||++|||++||++.|
T Consensus 235 ~~~~i~---~~~~-------------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 235 VIEMIR---SRQL-------------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred HHHHHH---cCCc-------------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 111100 0000 001224677899999999999999999999999999
Q ss_pred HH
Q 012014 450 RL 451 (473)
Q Consensus 450 ~~ 451 (473)
++
T Consensus 281 ~~ 282 (283)
T cd05048 281 RS 282 (283)
T ss_pred hc
Confidence 75
No 54
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.2e-43 Score=338.91 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=199.2
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++..++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 4789999999999999999995 468999999997432 2234568899999999999999999998754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~ 143 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG---------VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLT 143 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEE
Confidence 899999999999999997653 3558889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....+. +.......
T Consensus 144 Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~--- 214 (333)
T cd05600 144 DFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKYWK--- 214 (333)
T ss_pred eCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHhcc---
Confidence 9999976533 22345689999999999998999999999999999999999999975322110 01000000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
....... ........+.++.+|+.+||..+|.+|||+.++++.
T Consensus 215 ---~~~~~~~----------------------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 215 ---ETLQRPV----------------------YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ---ccccCCC----------------------CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000000 000001245678899999999999999999999864
No 55
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-42 Score=335.02 Aligned_cols=199 Identities=25% Similarity=0.310 Sum_probs=170.6
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.++|++.+.||+|+||.||+++. .++..+|+|.+..... .....+.+|++++.+++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 46899999999999999999994 4688999999875322 2345688999999999999999999998543 367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCcEEecCCccEEEe
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQP-PIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
++||||+++|+|.+++.... .+++..+..++.|++.||.||| ++ +|+||||||+|||++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~ 146 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK---------RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLC 146 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEc
Confidence 99999999999999997654 2557888999999999999999 64 69999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|||++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 147 Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 147 DFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred cCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 999987653321 22345899999999999989999999999999999999999999753
No 56
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=336.39 Aligned_cols=253 Identities=23% Similarity=0.404 Sum_probs=211.3
Q ss_pred CccceeecCCCeEEEEEEec---CC--CEEEEEEeec-cCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 148 SSANLIGAGNFGSVYNGTLF---DG--TTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~~~---~~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
...++||.|-||.||+|... .| -.||||.++. ..+.+.+.|..|+.+|+.++||||++++|+|.+. ..
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P~ 465 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------PM 465 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------ce
Confidence 34677999999999999832 23 3589999986 4455678899999999999999999999999764 47
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
|||||+++.|.|..||+.+.. .++......++.||+.||.||| ++++|||||...|||+.....+||+|
T Consensus 466 WivmEL~~~GELr~yLq~nk~--------sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKD--------SLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred eEEEecccchhHHHHHHhccc--------cchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecc
Confidence 999999999999999988764 4667888899999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
||+++.+......... ...-...|||||.+.-.+++.+||||-|||.+||++. |..||.+..+.+..
T Consensus 535 FGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI----------- 602 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI----------- 602 (974)
T ss_pred cchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-----------
Confidence 9999988765533332 2233567999999999999999999999999999988 99999986554421
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
..++.|. +.+.++.||+.|+.|+.+||.+||.+||++.||...|..+..
T Consensus 603 -----------~~iEnGe--------------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 -----------GHIENGE--------------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -----------EEecCCC--------------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1111111 224556799999999999999999999999999999998875
No 57
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-42 Score=341.39 Aligned_cols=271 Identities=22% Similarity=0.299 Sum_probs=205.4
Q ss_pred hhcccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcC-CCCceeeeeeee
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIK-HRNIVRVFTAFS 211 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 211 (473)
+....++|.+.++||+|+||.||+|... .+..||||+++.... ...+.+.+|+.++.++. ||||++++++|.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3445678999999999999999999842 134699999864322 23457889999999996 999999999985
Q ss_pred ccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC----------------------------------------------
Q 012014 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW---------------------------------------------- 245 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---------------------------------------------- 245 (473)
+. ...++|||||++|+|.+++........
T Consensus 112 ~~-----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 112 KS-----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred cC-----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 43 367999999999999999865321000
Q ss_pred -----------------------------------------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 246 -----------------------------------------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 246 -----------------------------------------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
......+++.++..++.|++.||.||| +++|+||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~di 263 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDL 263 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCC
Confidence 000113667888999999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 363 (473)
||+|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 99999999999999999999986543322222223346788999999998889999999999999999997 99998754
Q ss_pred CCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 364 FTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
......... ..... ....+..++..+.+++.+||+.||++|||+.
T Consensus 344 ~~~~~~~~~-~~~~~----------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 388 (400)
T cd05105 344 IVDSTFYNK-IKSGY----------------------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFL 388 (400)
T ss_pred chhHHHHHH-HhcCC----------------------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHH
Confidence 222111000 00000 0001123466788999999999999999999
Q ss_pred HHHHHHHHHH
Q 012014 444 DVESRLRLIR 453 (473)
Q Consensus 444 ev~~~L~~l~ 453 (473)
+|.+.|+.+.
T Consensus 389 ~l~~~l~~l~ 398 (400)
T cd05105 389 HLSDIVESLL 398 (400)
T ss_pred HHHHHHHHHc
Confidence 9999999874
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-42 Score=327.29 Aligned_cols=277 Identities=20% Similarity=0.272 Sum_probs=197.6
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.++|.+.++||+|+||.||+|. ..+++.||+|+++... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-----ERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----CCeE
Confidence 3579999999999999999998 4578999999987433 2234567899999999999999999999754 3467
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||++ |+|.+++..... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~~--------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~D 146 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCGN--------LMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLAD 146 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECc
Confidence 99999996 599998865432 2457888999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+ .+....... ..
T Consensus 147 fG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~-~~ 222 (288)
T cd07871 147 FGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLL-GT 222 (288)
T ss_pred CcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh-CC
Confidence 99997643322 11223457999999998865 468999999999999999999999997643221 111111111 11
Q ss_pred chhhhccccc-hHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFN-LQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+...... ...+.. ...+................+..+|+.+||+.||.+|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 223 PTEETWPGITSNEEFRS------YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CChHHhhccccchhhhc------cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0111000000 000000 000000000000011123456789999999999999999999974
No 59
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-42 Score=350.71 Aligned_cols=264 Identities=23% Similarity=0.319 Sum_probs=205.6
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeecccc--
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-- 215 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 215 (473)
....++|.+.++||+|+||.||+|. ..+++.||||++..... .....+.+|+..+..++|+||++++..+...+.
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 4456799999999999999999998 56799999999875332 233567889999999999999999887754321
Q ss_pred -CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 216 -QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 216 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
......++||||+++|+|.+++....... ..+++..+..++.|++.||.||| +++|+||||||+|||++.+
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~-----~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTN-----RTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSN 179 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCC
Confidence 11224689999999999999997543211 13668889999999999999999 9999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
+.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|..||.+.. .....
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~ 254 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVM 254 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH
Confidence 9999999999987654332233344569999999999999899999999999999999999999997532 11111
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
......... ..+...+..+.+|+.+||+.||.+|||+.+++..
T Consensus 255 ~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 HKTLAGRYD-------------------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111111000 0112345678899999999999999999999763
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.9e-42 Score=331.86 Aligned_cols=259 Identities=23% Similarity=0.375 Sum_probs=201.7
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCC----EEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGT----TIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
.++|+..+.||+|+||.||+|.+ .++. .||+|.++... ......+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---- 81 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 81 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC----
Confidence 35799999999999999999984 3343 48999986432 23346788999999999999999999998542
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
..++++||+++|+|.+++..... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+
T Consensus 82 --~~~~v~e~~~~g~l~~~l~~~~~--------~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 82 --TVQLITQLMPFGCLLDYVREHKD--------NIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred --CceeeeecCCCCCHHHHHHhccc--------cCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcE
Confidence 35799999999999999986532 2557888999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+..... +......
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~~~~~ 226 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEK 226 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHhC
Confidence 9999999987654332222222334678999999999899999999999999999998 999997532111 1111100
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
.. . ...+..++..+.+++.+||..||++|||+.+|+..|..+...
T Consensus 227 ~~--~--------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 227 GE--R--------------------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CC--C--------------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 00 0 000112345678999999999999999999999999988654
No 61
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.7e-42 Score=324.03 Aligned_cols=256 Identities=20% Similarity=0.317 Sum_probs=199.5
Q ss_pred cCCCCccceeecCCCeEEEEEEec----CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.++|++.+.||+|+||.||+|.+. .+..||+|.++.... .....+.+|+.++.+++||||+++++++.. .
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-----G 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----C
Confidence 356889999999999999999742 356899999875322 223568899999999999999999999754 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+||| +++++||||||+||+++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~--------~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEG--------QLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEE
Confidence 467999999999999999976431 3568899999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
++|||.+....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||.+..... .....
T Consensus 148 l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-----~~~~~ 221 (266)
T cd05064 148 ISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-----VIKAV 221 (266)
T ss_pred ECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHH
Confidence 99999876532211 111112335678999999998899999999999999999775 999997542211 11100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.... ....+..++..+.+++.+||+.+|.+|||+.+|.+.|+++
T Consensus 222 ~~~~-------------------------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 222 EDGF-------------------------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HCCC-------------------------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0000 0001123566789999999999999999999999998765
No 62
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=349.84 Aligned_cols=266 Identities=20% Similarity=0.226 Sum_probs=210.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCC-CEEEEEEeeccCCCCchhHHHHHHHHHhcC-CCCceeeeeeeeccc-cCC-c
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDG-TTIAVKVFNLIRPGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVD-YQG-A 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~-~ 218 (473)
...++++.++|.+|||+.||.|....+ ..||+|++-.......+.+.+|+.+|+.|. |+|||.+++...... ..+ .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 445678899999999999999996555 999999998777677788999999999996 999999999432222 223 4
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
..++|+||||.||+|-+++..+... .|++.++++|+.|+++|+.+||.. ..+|||||||-+||||+.+++.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~-------~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQT-------RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhc-------cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEE
Confidence 6788999999999999999866533 488999999999999999999944 56799999999999999999999
Q ss_pred EeecccccccCccccccc-------eeeccCCCCcCCCccc---cCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc
Q 012014 299 VGDFGMARFLPAIDKQNR-------FICIKGSTGYIPPEYD---LGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM 368 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~ 368 (473)
|||||.+.-......... .....-|+.|+|||++ .+.+.+.|+|||||||+||.|+....||++...-
T Consensus 187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-- 264 (738)
T KOG1989|consen 187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-- 264 (738)
T ss_pred eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--
Confidence 999999864322111110 0112358999999975 4677999999999999999999999999753111
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.+++. . ...+....+...+.+||..||+.||.+||++-+|++.
T Consensus 265 ---------------aIlng----~------------------Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 265 ---------------AILNG----N------------------YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred ---------------eEEec----c------------------ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 11110 0 0001113477889999999999999999999999999
Q ss_pred HHHHHHh
Q 012014 449 LRLIRRK 455 (473)
Q Consensus 449 L~~l~~~ 455 (473)
+-.|..+
T Consensus 308 ~~~l~~~ 314 (738)
T KOG1989|consen 308 IFELANK 314 (738)
T ss_pred HHHHhcC
Confidence 9998744
No 63
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-43 Score=353.50 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=198.2
Q ss_pred CCCccceeecCCCeEEEEEEe-cC-CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.++..++|||||+++++|... ...++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CEEEE
Confidence 488899999999999999983 33 678899877544433445678899999999999999999998553 36899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++|+|.+++...... ...+++.++..++.||+.||.||| +++|+||||||+|||++.++.+||+|||
T Consensus 143 v~E~~~gg~L~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKE-----HLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred EEECCCCCCHHHHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCc
Confidence 99999999999988643211 113668889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+++.+.............||+.|+|||++.+..++.++|||||||++|+|++|..||.+... .............
T Consensus 215 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~~~ 289 (478)
T PTZ00267 215 FSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGKYD 289 (478)
T ss_pred CceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCC
Confidence 99876543322233445699999999999998999999999999999999999999975321 1111111000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. .+...+..+.+|+.+||..||++|||+.+++.
T Consensus 290 ~-------------------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 P-------------------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred C-------------------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0 01123457889999999999999999999864
No 64
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.5e-43 Score=336.17 Aligned_cols=236 Identities=22% Similarity=0.291 Sum_probs=186.9
Q ss_pred eecCCCeEEEEEEe-cCCCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGTL-FDGTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||+|+||.||+|.. .+++.||+|+++.. .......+.+|+.++.+++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 69999999999994 46889999998742 22334567889999999999999999998754 34689999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 76 ~~g~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~ 143 (312)
T cd05585 76 NGGELFHHLQREG---------RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLN 143 (312)
T ss_pred CCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence 9999999997653 3568888999999999999999 999999999999999999999999999999754
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ............
T Consensus 144 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~~~------ 210 (312)
T cd05585 144 MKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQEPL------ 210 (312)
T ss_pred ccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCCC------
Confidence 3221 222345699999999999998999999999999999999999999975321 111111110000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
..+...+..+.+|+.+||+.||.+||++..
T Consensus 211 --------------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 211 --------------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred --------------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 001124457789999999999999986433
No 65
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.9e-42 Score=334.14 Aligned_cols=270 Identities=23% Similarity=0.312 Sum_probs=204.1
Q ss_pred ccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 214 (473)
..++|++.++||+|+||.||+|... +++.||+|+++.... ...+.+.+|+.++.++ +||||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~- 83 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP- 83 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-
Confidence 3458999999999999999999632 347899999864321 1234577899999999 899999999988542
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCC-------------------------------------------------
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNW------------------------------------------------- 245 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------- 245 (473)
....+++|||+++|+|.+++........
T Consensus 84 ---~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 84 ---GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ---CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 3467899999999999999865321100
Q ss_pred ---CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeeccC
Q 012014 246 ---RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322 (473)
Q Consensus 246 ---~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g 322 (473)
......+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||+++.+.............+
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCC
Confidence 000114678899999999999999999 99999999999999999999999999999987643322222223446
Q ss_pred CCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhh
Q 012014 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMC 401 (473)
Q Consensus 323 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (473)
+..|+|||++.+..++.++|||||||++|||++ |..||.+....+. +......... .
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~----~----------------- 295 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRLKEGTR----M----------------- 295 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHHhccCC----C-----------------
Confidence 778999999999999999999999999999998 9999976322111 1111000000 0
Q ss_pred cccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 402 MEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
..+...+.++.+++.+||+.+|++|||+.||++.|+.+..
T Consensus 296 -------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 -------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011234578899999999999999999999999998754
No 66
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-42 Score=313.90 Aligned_cols=283 Identities=21% Similarity=0.251 Sum_probs=205.9
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCC-ceeeeeeeecccc-CCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRN-IVRVFTAFSGVDY-QGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~-~~~~ 219 (473)
..|...++||+|+||+||+|+ ..+|+.||+|+++.... +......+|+.++++++|+| ||.+++++...+. ....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 356777889999999999999 67899999999986543 34456789999999999999 9999999865431 2233
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++|+||+ .-+|.+++....... ..++...+..++.||+.||+||| +++|+||||||+|||++++|.+||
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~-----~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKl 161 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKP-----QGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKL 161 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccc-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEee
Confidence 678999999 569999998766321 12445788999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+|+.+.-.. ...+...+|..|.|||++.+. .|+...||||+|||++||++++.-|.+..+.+.....+.....
T Consensus 162 aDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt 239 (323)
T KOG0594|consen 162 ADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT 239 (323)
T ss_pred eccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence 9999999654322 224455689999999999887 6999999999999999999999999886653322222211112
Q ss_pred C--cchhhhccccchHHHHhhhhhhcccccCCC-CcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 P--QRAEEVVDDFNLQEIEEGRTMCMEVSSSSG-SSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
| ..++.+..- ..+.. ..+... ................+++..||+++|.+|.|++..++.
T Consensus 240 P~e~~Wp~v~~~---~~~k~-------~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 240 PNEKDWPGVSSL---PDYKA-------PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccCCCCcccc---ccccc-------cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 2 111111110 00000 000000 000000111112477899999999999999999998774
No 67
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.1e-42 Score=326.12 Aligned_cols=268 Identities=23% Similarity=0.374 Sum_probs=206.3
Q ss_pred cCCCCccceeecCCCeEEEEEEe------cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL------FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
.++|.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++.+++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 79 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG---- 79 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----
Confidence 35788999999999999999973 23456899988754444456789999999999999999999998543
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCC----CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNW----RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
...+++|||+++++|.+++........ ......+++.+++.++.|++.||+||| ++|++||||||+||++++
T Consensus 80 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~ 155 (288)
T cd05093 80 -DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGE 155 (288)
T ss_pred -CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEcc
Confidence 467999999999999999975432110 011124778999999999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHH
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~ 372 (473)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~----- 230 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----- 230 (288)
T ss_pred CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999999986543222111222335778999999998889999999999999999998 999987543211
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
............ .....+..+.+|+.+||+.||.+|||+.||++.|+.+
T Consensus 231 ~~~~i~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 231 VIECITQGRVLQ-------------------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HHHHHHcCCcCC-------------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 111000000000 0012345789999999999999999999999999999
Q ss_pred HHh
Q 012014 453 RRK 455 (473)
Q Consensus 453 ~~~ 455 (473)
..+
T Consensus 280 ~~~ 282 (288)
T cd05093 280 AKA 282 (288)
T ss_pred HHh
Confidence 754
No 68
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-43 Score=338.25 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=195.8
Q ss_pred ccCCCCccceeecCCCeEEEEEEec-C-CCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF-D-GTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
..++|.+.+.||+|+||.||+|... + +..||+|++.... ......+.+|+.++..++||||+++++++.+.
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~---- 103 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE---- 103 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC----
Confidence 4467999999999999999999843 3 3689999986422 23345688999999999999999999998543
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
...++||||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+
T Consensus 104 -~~~~lv~Ey~~~g~L~~~i~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~i 170 (340)
T PTZ00426 104 -SYLYLVLEFVIGGEFFTFLRRNK---------RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFI 170 (340)
T ss_pred -CEEEEEEeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCE
Confidence 46899999999999999997654 3568888999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||.+.... ......
T Consensus 171 kL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~i 240 (340)
T PTZ00426 171 KMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQKI 240 (340)
T ss_pred EEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHHHH
Confidence 99999999865321 23456999999999999888999999999999999999999999753211 000100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..... . .+...+..+.+++.+||+.||++|+ |++++++
T Consensus 241 ~~~~~-~-------------------------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 241 LEGII-Y-------------------------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred hcCCC-C-------------------------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 00000 0 0011234567899999999999995 7888765
No 69
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.6e-43 Score=335.22 Aligned_cols=242 Identities=19% Similarity=0.231 Sum_probs=191.8
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
++||+|+||.||++. ..+++.||+|++.... ......+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 469999999999998 4578999999997432 2234567889999999999999999988754 346899999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|.+++.... .+++.++..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 76 y~~~g~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 76 YVNGGELFFHLSRER---------VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred CCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCc
Confidence 999999999987653 3568899999999999999999 9999999999999999999999999999987
Q ss_pred ccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhc
Q 012014 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVV 386 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (473)
..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ...........
T Consensus 144 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~~---- 212 (328)
T cd05593 144 EGITD--AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEDI---- 212 (328)
T ss_pred cCCCc--ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCCc----
Confidence 53221 12223456999999999999889999999999999999999999999753211 11111000000
Q ss_pred cccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHHH
Q 012014 387 DDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVESR 448 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 448 (473)
..+...+..+.+|+.+||+.||++|| ++.|+++.
T Consensus 213 ----------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 ----------------------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ----------------------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 00112345778999999999999997 88888753
No 70
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.9e-43 Score=335.62 Aligned_cols=241 Identities=19% Similarity=0.232 Sum_probs=190.8
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
+.||+|+||.||++. ..+|+.||+|+++... ......+.+|+.++..++||||++++++|... ...++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC-----CEEEEEEe
Confidence 469999999999998 4578999999997432 22344677899999999999999999988543 36899999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|..++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 76 ~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 143 (323)
T cd05595 76 YANGGELFFHLSRER---------VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhc
Confidence 999999999887653 3568899999999999999999 9999999999999999999999999999987
Q ss_pred ccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhc
Q 012014 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVV 386 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (473)
..... ........||+.|+|||++.+..++.++|||||||++|||++|..||...... ...........
T Consensus 144 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~---- 212 (323)
T cd05595 144 EGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELILMEEI---- 212 (323)
T ss_pred cccCC--CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCC----
Confidence 53221 11223356899999999999989999999999999999999999999753211 11110000000
Q ss_pred cccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 387 DDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..+...+..+.+|+.+||+.||++|| ++.++++
T Consensus 213 ----------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 ----------------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00112355778999999999999998 7888765
No 71
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-42 Score=323.46 Aligned_cols=256 Identities=23% Similarity=0.397 Sum_probs=202.2
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+.+ ....+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIY 77 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCcE
Confidence 346789999999999999999997778899999876432 235678999999999999999999988754 33579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++|+|.+++...... .+++.++..++.|++.||.||| +++++||||||+||+++.++.+||+||
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGG-------KVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCC
Confidence 999999999999999764322 3557888999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..||....... .........+
T Consensus 148 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~-- 222 (261)
T cd05072 148 GLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRGYR-- 222 (261)
T ss_pred ccceecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcCCC--
Confidence 99987643221 11122335678999999988889999999999999999998 999997532111 0000000000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
.+.....+..+.+++.+||+.||++|||+++|.+.|+.
T Consensus 223 --------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 --------------------------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00001245578899999999999999999999999985
No 72
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.9e-42 Score=324.16 Aligned_cols=263 Identities=25% Similarity=0.434 Sum_probs=203.3
Q ss_pred cCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 216 (473)
.++|.+.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++..++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC---
Confidence 356888999999999999999853 3478999998754433 346789999999999999999999998553
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCC-----CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNW-----RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~ 291 (473)
...+++|||+++++|.+++........ ......+++.++..++.|++.||.||| +++++||||||+||++
T Consensus 81 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili 155 (280)
T cd05049 81 --DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLV 155 (280)
T ss_pred --CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEE
Confidence 467999999999999999976542110 111224678899999999999999999 9999999999999999
Q ss_pred cCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccH
Q 012014 292 DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNL 370 (473)
Q Consensus 292 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~ 370 (473)
+.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||.+.....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--- 232 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--- 232 (280)
T ss_pred cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---
Confidence 9999999999999976533221111122335788999999999999999999999999999998 999986532211
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
........... ..+...+..+.+++.+||+.||++|||+.||++.|+
T Consensus 233 --~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 --VIECITQGRLL-------------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHcCCcC-------------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11000000000 001124567889999999999999999999999886
No 73
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.5e-43 Score=324.84 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=206.5
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
...+|.+.++||.|+||.||+|...++..+|+|.+..........+.+|+.+++.++||||+++++++.+. ...+
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 78 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-----EPVY 78 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC-----CCeE
Confidence 34578899999999999999999777899999998765554567889999999999999999999987543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++...... .+++.++..++.|++.||.||| +++++|+||||+||++++++.+||+||
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~ 148 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQ-------VLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADF 148 (261)
T ss_pred EEEeecccCCHHHHHhcCCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccc
Confidence 999999999999999765322 3568889999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|.+......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+ .+.... ....
T Consensus 149 g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-~~~~~~-~~~~-- 222 (261)
T cd05148 149 GLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-VYDQIT-AGYR-- 222 (261)
T ss_pred cchhhcCCcccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHHH-hCCc--
Confidence 999766432211 113345778999999988889999999999999999998 899997533111 001000 0000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...+..++..+.+++.+||+.||.+|||+.+|++.|+.+
T Consensus 223 --------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 --------------------------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 001123456788999999999999999999999999863
No 74
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.7e-43 Score=324.44 Aligned_cols=250 Identities=28% Similarity=0.438 Sum_probs=189.4
Q ss_pred ccceeecCCCeEEEEEEec-----CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 149 SANLIGAGNFGSVYNGTLF-----DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.+.||.|.||.||+|.+. .+..|+||.++..... ..+.+.+|++.+.+++||||++++|++... ...+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc-----cccc
Confidence 4578999999999999965 3578999999643222 357899999999999999999999999732 2479
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++|+|.++|...... .+++.++..|+.||+.||.||| +++++|+||+++||+++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~-------~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f 147 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKE-------PLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDF 147 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTT-------TSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEEST
T ss_pred ccccccccccccccccccccc-------cccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence 999999999999999887222 4678999999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++................+...|+|||.+.+..++.++||||||+++|||++ |..||...... .+........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-----~~~~~~~~~~ 222 (259)
T PF07714_consen 148 GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-----EIIEKLKQGQ 222 (259)
T ss_dssp TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-----HHHHHHHTTE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccc
Confidence 99987632222222222336778999999998889999999999999999999 78998654211 1111111110
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
.. ..+..++..+.+++..||+.||++|||+.+|++.|
T Consensus 223 ~~-------------------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 RL-------------------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ET-------------------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cc-------------------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00 01123466788999999999999999999999887
No 75
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.8e-42 Score=324.30 Aligned_cols=267 Identities=24% Similarity=0.391 Sum_probs=205.8
Q ss_pred CCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|.+.+.||+|+||.||+|... ++..+++|.++.......+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC-----
Confidence 46788899999999999999732 3456899988654444446789999999999999999999998543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCC-------CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTN-------WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~ 291 (473)
...++||||+++++|.+++....... .......+++..++.++.||+.||.||| +++|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEE
Confidence 36799999999999999997653210 0011123678999999999999999999 9999999999999999
Q ss_pred cCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccH
Q 012014 292 DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNL 370 (473)
Q Consensus 292 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~ 370 (473)
+.++.+||+|||++................|+..|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 233 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--- 233 (291)
T ss_pred ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 9999999999999976543322222223346788999999998889999999999999999999 999986532211
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
............ ....++..+.+++.+||+.||++|||+.+|++.|+
T Consensus 234 --~~~~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 234 --VIECITQGRVLE-------------------------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred --HHHHHhCCCCCC-------------------------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 111000000000 01124567889999999999999999999999999
Q ss_pred HHHHh
Q 012014 451 LIRRK 455 (473)
Q Consensus 451 ~l~~~ 455 (473)
.+...
T Consensus 281 ~~~~~ 285 (291)
T cd05094 281 ALGKA 285 (291)
T ss_pred HHHhh
Confidence 99653
No 76
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=9e-42 Score=317.32 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=197.4
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
++|++.+.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++... ...++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CCEEEE
Confidence 4688889999999999999998777899999876332 2346788999999999999999999997543 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++|+|.+++..... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||.
T Consensus 78 ~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~ 146 (256)
T cd05114 78 TEFMENGCLLNYLRQRQG--------KLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGM 146 (256)
T ss_pred EEcCCCCcHHHHHHhCcc--------CCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCC
Confidence 999999999999875432 2568889999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
++........ ......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... ...........
T Consensus 147 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~~i~~~~~- 219 (256)
T cd05114 147 TRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEMISRGFR- 219 (256)
T ss_pred ccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCC-
Confidence 8765332211 1122235668999999988889999999999999999999 89999653211 11111100000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
... +...+..+.+++.+||+.||++|||+.++++.|
T Consensus 220 -~~~-----------------------------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 -LYR-----------------------------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCC-----------------------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000 011234688999999999999999999999876
No 77
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.4e-42 Score=321.23 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=198.0
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCC----EEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGT----TIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
++|++.+.||+|+||.||+|.+ .+++ .+++|.+..... .....+..|+..+.+++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 4688899999999999999984 3444 477777653221 123457778888999999999999998743
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++++||+++|+|.+++..... .+++..+..++.||+.||.||| +++++||||||+||+++.++.+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~k 149 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD--------SLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQ 149 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEE
Confidence 235789999999999999976432 3568899999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.+..... +...+...
T Consensus 150 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~~ 227 (279)
T cd05111 150 IADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLEKG 227 (279)
T ss_pred EcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHCC
Confidence 999999986644332222233456788999999988889999999999999999998 999997642111 11111100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
.. .. .+..++..+.+++.+||..||++|||+.|+++.|..+..
T Consensus 228 ~~-----~~-----------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 228 ER-----LA-----------------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred Cc-----CC-----------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 00 00 001134467789999999999999999999999998765
No 78
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5e-42 Score=322.86 Aligned_cols=265 Identities=23% Similarity=0.348 Sum_probs=200.1
Q ss_pred cccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
...++|++.+.||+|+||.||+|... .+..||+|+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-- 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-- 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--
Confidence 35678999999999999999998742 246799998863221 223468899999999999999999999743
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCC-CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTN-WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
....++||||+++|+|.+++....... ..+....+++..+..++.|++.||.||| +++++||||||+||++++
T Consensus 81 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 81 ---GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAE 154 (277)
T ss_pred ---CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcC
Confidence 336799999999999999997543211 0111123557888999999999999999 899999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHH
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~ 372 (473)
++.++|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~ 229 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----Q 229 (277)
T ss_pred CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999999876543222111122345778999999998889999999999999999999 78898753221 1
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
............ .+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 230 ~~~~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLLD-------------------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcCC-------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111000000000 01123557889999999999999999999998876
No 79
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.2e-41 Score=317.87 Aligned_cols=256 Identities=23% Similarity=0.342 Sum_probs=200.9
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|.+.+.||+|+||.||+|.. .+++.||+|.+... ......+.+|++++..++||||+++++++... ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFY 78 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCcE
Confidence 34688889999999999999984 46889999998643 23346788999999999999999999987543 3579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++..++.++.|++.||.||| +++++||||||+||++++++.+||+||
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~-------~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQ-------EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCC
Confidence 999999999999999754322 3568888999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... ..........
T Consensus 149 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~ 222 (263)
T cd05052 149 GLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKGY 222 (263)
T ss_pred cccccccccee-eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCC
Confidence 99986543221 11112224667999999998899999999999999999998 99998753211 1110000000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
. ...+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 223 -----~--------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 -----R--------------------------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----C--------------------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0 000112456789999999999999999999999999875
No 80
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.9e-42 Score=322.17 Aligned_cols=264 Identities=22% Similarity=0.355 Sum_probs=201.7
Q ss_pred CCccceeecCCCeEEEEEEec-C---CCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCce
Q 012014 147 FSSANLIGAGNFGSVYNGTLF-D---GTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGAR 219 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 219 (473)
|.+.+.||+|+||.||+|... + +..||+|+++.... .....+.+|+..++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999843 2 36799999874332 223578899999999999999999998765442 2334
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++|||+++|+|..++........ ...+++..+..++.|++.||.||| +++++||||||+||++++++.+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl 154 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGL---PEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCV 154 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCC---cccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEE
Confidence 57999999999999999865432111 124668899999999999999999 899999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+ +.....
T Consensus 155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~~~--- 229 (273)
T cd05035 155 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDYLR--- 229 (273)
T ss_pred CCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH---
Confidence 99999986644322222222335678999999988889999999999999999999 889986532211 000000
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.... ...+..++..+.+++.+||+.||++|||+.||++.|+.+
T Consensus 230 ~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNR-------------------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCC-------------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 000123456789999999999999999999999999876
No 81
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-41 Score=318.54 Aligned_cols=261 Identities=19% Similarity=0.278 Sum_probs=203.9
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|+ ..+++.||+|.++.... .....+.+|+.+++.++||||+++++++.+. ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 578999999999999999998 45789999998864322 2234678999999999999999999987643 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++++||+++|+|.+++...... ...++...+..++.|++.||.||| +++++|+||||+||+++.++.++|+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~ 148 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ-----KRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLG 148 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc-----cCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEEC
Confidence 79999999999999988643211 113567889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ ......|++.|+|||.+.+..++.++||||||+++|+|++|..||....... ..+.......
T Consensus 149 d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~---~~~~~~~~~~ 223 (267)
T cd08228 149 DLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---FSLCQKIEQC 223 (267)
T ss_pred ccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH---HHHHHHHhcC
Confidence 9999887643221 1223458899999999988889999999999999999999999986532211 1111110000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
.... ......+..+.+++.+||+.+|++|||+.+|++.|+.++
T Consensus 224 ~~~~------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 224 DYPP------------------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCC------------------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000 001134567899999999999999999999999999874
No 82
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.2e-42 Score=338.53 Aligned_cols=201 Identities=21% Similarity=0.280 Sum_probs=169.3
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.|...+.||+|+||.||+|+ ..+++.||+|++.... ......+.+|+.++..++||||+++++++.+. ...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~-----~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK-----DNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC-----CEE
Confidence 58889999999999999998 4578999999997432 22345688999999999999999999998643 368
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~---------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~D 144 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME---------VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTD 144 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEee
Confidence 99999999999999997654 3557888889999999999999 99999999999999999999999999
Q ss_pred cccccccCccccc---------------------------------------------cceeeccCCCCcCCCccccCCC
Q 012014 302 FGMARFLPAIDKQ---------------------------------------------NRFICIKGSTGYIPPEYDLGCE 336 (473)
Q Consensus 302 fg~~~~~~~~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~ 336 (473)
||+++.+...... .......||+.|+|||++.+..
T Consensus 145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (381)
T cd05626 145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG 224 (381)
T ss_pred CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence 9997643210000 0012346999999999999888
Q ss_pred CCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 337 ASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 337 ~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
++.++|||||||++|||++|..||...
T Consensus 225 ~~~~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 225 YTQLCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred CCCccceeehhhHHHHHHhCCCCCcCC
Confidence 999999999999999999999999764
No 83
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4e-42 Score=324.60 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=202.2
Q ss_pred CCC-CccceeecCCCeEEEEEE-----ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 145 NGF-SSANLIGAGNFGSVYNGT-----LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~-~~~~~lg~G~~g~V~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
++| ...+.||+|+||.||++. ..++..||+|.++.... .....+.+|+.++++++||||+++++++... .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---G 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---C
Confidence 344 888999999999998864 23578899999875332 2346788999999999999999999987542 2
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....+++|||+++++|.+++... .+++.++..++.|++.||.||| +++|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~----------~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~ 146 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH----------KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLV 146 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcE
Confidence 34678999999999999999754 2568999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccc-eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNR-FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||+++.......... .....++..|+|||.+.+..++.++||||||+++|+|++|..||......- ......
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~---~~~~~~ 223 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF---EEMIGP 223 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh---hhhhcc
Confidence 9999999986644221111 112235667999999988889999999999999999999999986532211 111100
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
.. ............... ...+.+..++..+.+++.+||+.||++|||+++|++.|+.+.
T Consensus 224 ~~----~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 224 KQ----GQMTVVRLIELLERG--------------MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cc----cccchhhhhhhhhcC--------------CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 000000000000000 000111235678999999999999999999999999999874
No 84
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.5e-42 Score=323.80 Aligned_cols=275 Identities=23% Similarity=0.338 Sum_probs=203.0
Q ss_pred cCCCCccceeecCCCeEEEEEEe-----cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-----FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.++|++.+.||+|+||.||++.. .++..||+|.+........+.+.+|++++..++||||+++++++... +.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CC
Confidence 35788999999999999999873 35789999998755444456789999999999999999999987542 23
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++|+|.+++..... .+++..+..++.|++.||.||| ++|++||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~--------~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~ 148 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRE--------RLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVK 148 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCc--------CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEE
Confidence 457999999999999999975432 2558889999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccce-eeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRF-ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++............ ....++..|+|||++.+..++.++||||||+++|||++|..|+..... .+....
T Consensus 149 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~ 222 (284)
T cd05081 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA------EFMRMM 222 (284)
T ss_pred ECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch------hhhhhc
Confidence 9999999876443221111 112234569999999888899999999999999999998877643211 011100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
............+........ .......++..+.+|+.+||+.+|++|||+.||++.|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 223 GNDKQGQMIVYHLIELLKNNG--------------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccccccccchHHHHHHHhcCC--------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000000000000000000000 0001123456799999999999999999999999999876
No 85
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.9e-42 Score=320.03 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=202.3
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..++|++.+.||+|+||.||+|...+++.||+|.++... ...+.+.+|+.++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EPIY 77 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecC-----CCee
Confidence 346789999999999999999997677889999986433 2356788999999999999999999987543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+||
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~df 147 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGR-------ALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADF 147 (261)
T ss_pred eeeecccCCcHHHHHhccCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCc
Confidence 999999999999999765311 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|+++....... .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+..... .+... .....
T Consensus 148 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~-~~~~~-- 222 (261)
T cd05068 148 GLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQQV-DQGYR-- 222 (261)
T ss_pred ceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH-HcCCC--
Confidence 99987653211 11111223457999999998889999999999999999999 999997532111 00000 00000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...+...+..+.+++.+||+.||.+||++.+|.+.|+.+
T Consensus 223 --------------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 --------------------------------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --------------------------------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 000112456788999999999999999999999999853
No 86
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=325.93 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=207.0
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCC---chhHHHHHHHHHhcC-CCCceeeeeeeeccccC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 216 (473)
.....|.+.+.||+|.||.||+++ ..+|+.+|+|.+.+..... ...+.+|+.+|+++. |||||.++++|.+.
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--- 108 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--- 108 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC---
Confidence 345678889999999999999999 4569999999997655433 358999999999998 99999999998654
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC--
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-- 294 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-- 294 (473)
...++|||+|.||.|.+.+... .+++..+..++.|++.|+.||| +.||+||||||+|+|+...
T Consensus 109 --~~~~lvmEL~~GGeLfd~i~~~----------~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 109 --DSVYLVMELCEGGELFDRIVKK----------HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred --CeEEEEEEecCCchHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccC
Confidence 3789999999999999999875 1669999999999999999999 9999999999999999533
Q ss_pred --ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHH
Q 012014 295 --MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 295 --~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~ 372 (473)
+.+|++|||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.+........ .
T Consensus 174 ~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~ 249 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-A 249 (382)
T ss_pred CCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-H
Confidence 5799999999998755 445667889999999999999999999999999999999999999998754333211 1
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...... .. . . +.-......+.+++..|+..||..|+|+.++++
T Consensus 250 i~~~~~-----~f-~---~-----------------------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 250 ILRGDF-----DF-T---S-----------------------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHcCCC-----CC-C---C-----------------------CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111110 00 0 0 001234667889999999999999999999988
No 87
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.8e-42 Score=334.04 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=189.6
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.++|+..++||+|+||.||+|+ ..+++.||||++..... .....+.+|+++++.++|+||+++++++.. ....
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 147 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEI 147 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeE
Confidence 3567788999999999999998 45689999999864322 223568899999999999999999999754 3467
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++|+|.+... ..+..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|
T Consensus 148 ~lv~e~~~~~~L~~~~~-------------~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~D 211 (353)
T PLN00034 148 QVLLEFMDGGSLEGTHI-------------ADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIAD 211 (353)
T ss_pred EEEEecCCCCccccccc-------------CCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcc
Confidence 99999999999865321 225677889999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-----CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-----CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+++.+.... .......||..|+|||++.. ...+.++|||||||++|||++|+.||......+ +......
T Consensus 212 fG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~ 287 (353)
T PLN00034 212 FGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCA 287 (353)
T ss_pred cccceeccccc--ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHH
Confidence 99998654321 11233468999999998743 234568999999999999999999997322111 1111100
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...... .......+.++.+|+.+||+.||++|||+.||++.
T Consensus 288 ~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 288 ICMSQP-------------------------------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HhccCC-------------------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00012345678899999999999999999999864
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.6e-42 Score=329.29 Aligned_cols=199 Identities=26% Similarity=0.339 Sum_probs=169.8
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.++|++.++||+|+||.||++.. .++..+|+|.+.... ......+.+|++++..++||||++++++|... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 46899999999999999999994 468899999887532 22335688999999999999999999998653 378
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEe
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
++||||+++|+|.+++.... .+++..+..++.|++.||.||| + .+|+||||||+|||++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~ 146 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG---------RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLC 146 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEe
Confidence 99999999999999997643 2457788899999999999999 6 479999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|||++....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 147 Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 147 DFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred eCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 999987553221 12345899999999999888999999999999999999999999754
No 89
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-41 Score=321.00 Aligned_cols=263 Identities=22% Similarity=0.375 Sum_probs=200.7
Q ss_pred CCCCccceeecCCCeEEEEEEe-----cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-----FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
++|++.+.||+|+||.||+|.. .++..+|+|.++.... .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE----- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC-----
Confidence 4688889999999999999973 2457899999874332 2235688999999999999999999987543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCC--------CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTN--------WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
...+++|||+++++|.+++....... .......+++.+++.++.|++.||.||| +++++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEE
Confidence 36799999999999999986432110 0111224668889999999999999999 999999999999999
Q ss_pred ecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCccc
Q 012014 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMN 369 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~ 369 (473)
++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+.... .
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~ 234 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--E 234 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999986543322222233445778999999988889999999999999999998 99998753211 1
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
+...+... ... ..+..++..+.+++.+||+.||++||++.+|++.|
T Consensus 235 ~~~~~~~~---~~~-------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 235 VIEMVRKR---QLL-------------------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHcC---CcC-------------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 11111100 000 00112456788999999999999999999999988
Q ss_pred HH
Q 012014 450 RL 451 (473)
Q Consensus 450 ~~ 451 (473)
.+
T Consensus 281 ~~ 282 (283)
T cd05090 281 RS 282 (283)
T ss_pred hc
Confidence 64
No 90
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-42 Score=339.18 Aligned_cols=202 Identities=23% Similarity=0.350 Sum_probs=171.4
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.++||+|+||.||+|+ ..+++.||||+++... ......+.+|+.++..++||||++++++|.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 478999999999999999999 4568999999997432 2234567889999999999999999999854 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~ 143 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD---------TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLS 143 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEe
Confidence 899999999999999997654 3668899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCcccccc------------------------------------ceeeccCCCCcCCCccccCCCCCcccchh
Q 012014 301 DFGMARFLPAIDKQN------------------------------------RFICIKGSTGYIPPEYDLGCEASTYGDVY 344 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 344 (473)
|||+++.+....... ......||+.|+|||++.+..++.++|||
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 999987543211000 01124599999999999998999999999
Q ss_pred hHhHHHHHHHhCCCCCCCC
Q 012014 345 SFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 345 SlG~il~elltg~~P~~~~ 363 (473)
||||++|||++|..||.+.
T Consensus 224 SlG~il~el~~G~~Pf~~~ 242 (364)
T cd05599 224 SLGVIMYEMLVGYPPFCSD 242 (364)
T ss_pred cchhHHHHhhcCCCCCCCC
Confidence 9999999999999999753
No 91
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6e-42 Score=320.39 Aligned_cols=257 Identities=23% Similarity=0.379 Sum_probs=201.3
Q ss_pred cCCCCccceeecCCCeEEEEEEec----CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.++|++.+.||+|+||.||+|.+. +...||+|.++.... .....+.+|+.++..++||||+++++++.+ .
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-----S 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----C
Confidence 467899999999999999999853 245799998864332 233568899999999999999999998754 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+++|||+++++|.+++..... .+++.++..++.|++.||.||| +++|+|+||||+||+++.++.++
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~ 146 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG--------KFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCK 146 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEE
Confidence 357999999999999999976432 3568899999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||....... +.......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~ 224 (266)
T cd05033 147 VSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAVEDG 224 (266)
T ss_pred ECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHHHcC
Confidence 999999987752222222222335678999999998889999999999999999998 999986432111 00000000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
... +.+..++..+.+|+.+||+.||++|||+.||++.|+++
T Consensus 225 ~~~----------------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 YRL----------------------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCC----------------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 00112456788999999999999999999999999875
No 92
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-42 Score=313.95 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=202.9
Q ss_pred ccCCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..++|++.+.||+|.-|+||+++.. ++..+|+|++.+.. .....+.+.|-+||+.++||.++.+|..|.. .
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-----~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-----D 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-----c
Confidence 3467888999999999999999954 46899999997533 2334567889999999999999999999854 5
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
.+.|++||||+||+|..+++.+... .|++..+.-++.+++.||+||| -.|||+|||||+||||.++|++.
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~~-------~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIM 219 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPGK-------RFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIM 219 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCCC-------ccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEE
Confidence 5889999999999999998877644 5889999999999999999999 99999999999999999999999
Q ss_pred EeecccccccCc---------------------------------ccc---------------------ccceeeccCCC
Q 012014 299 VGDFGMARFLPA---------------------------------IDK---------------------QNRFICIKGST 324 (473)
Q Consensus 299 l~Dfg~~~~~~~---------------------------------~~~---------------------~~~~~~~~gt~ 324 (473)
|+||.++..... ... .....+++||-
T Consensus 220 LsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGTh 299 (459)
T KOG0610|consen 220 LSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTH 299 (459)
T ss_pred eeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccc
Confidence 999998743211 000 01123467999
Q ss_pred CcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhccc
Q 012014 325 GYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEV 404 (473)
Q Consensus 325 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
.|.|||++.|...+.++|+|+|||++|||+.|..||.|....++ +.+.+.....
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-l~NIv~~~l~------------------------- 353 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-LRNIVGQPLK------------------------- 353 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-HHHHhcCCCc-------------------------
Confidence 99999999999999999999999999999999999998655443 2222211100
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC----hHHHH
Q 012014 405 SSSSGSSAHASIILECFNSICEIGVACSAERPRERMK----INDVE 446 (473)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~ev~ 446 (473)
.+...+....+.+||.+.|.+||.+|.. +.||-
T Consensus 354 ---------Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 354 ---------FPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred ---------CCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 0001134457789999999999999998 66664
No 93
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.9e-42 Score=341.43 Aligned_cols=287 Identities=20% Similarity=0.265 Sum_probs=199.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeecccc---CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY---QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~ 218 (473)
...+|.+.++||+|+||.||+|.. .+++.||||++... .....+|+.+++.++||||++++++|..... ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 346799999999999999999984 56899999988532 2345679999999999999999988754322 223
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-cE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IG 297 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~~ 297 (473)
.+.++||||++ ++|.+++...... ...+++..+..++.||+.||.||| +++|+||||||+|||++.++ .+
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~~-----~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~v 210 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYARN-----NHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTL 210 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCce
Confidence 45789999996 5787776532111 113668889999999999999999 99999999999999998664 79
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||+++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+ .+......
T Consensus 211 kL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~ 286 (440)
T PTZ00036 211 KLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQV 286 (440)
T ss_pred eeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 999999998664322 22234689999999998764 68999999999999999999999998643322 12222211
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH--HHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE--SRLRLIR 453 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~--~~L~~l~ 453 (473)
........... . ...+.. ...............+...+.++.+|+.+||..||.+|||+.|++ ..++.++
T Consensus 287 ~~~p~~~~~~~-~-~~~~~~-----~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 287 LGTPTEDQLKE-M-NPNYAD-----IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred hCCCCHHHHHH-h-chhhhc-----ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 11111000000 0 000000 000000000011111223456889999999999999999999998 3455444
No 94
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-42 Score=331.68 Aligned_cols=244 Identities=22% Similarity=0.284 Sum_probs=189.7
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHH---HhcCCCCceeeeeeeeccccCCce
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAA---INIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
|++.+.||+|+||.||+|. ..+++.||||+++... ....+.+.+|++++ ..++||||+++++++.. ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-----~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-----ED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-----CC
Confidence 6678899999999999998 4568999999997432 22335567776665 45689999999999754 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++|+|..++... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~----------~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL 142 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD----------VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKI 142 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEe
Confidence 789999999999999988653 3668899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ........
T Consensus 143 ~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~i~~ 215 (324)
T cd05589 143 ADFGLCKEGMGF--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDSIVN 215 (324)
T ss_pred CcccCCccCCCC--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh
Confidence 999998753221 12223456999999999999989999999999999999999999999753211 11100000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
... ..+...+..+.+++.+||+.||.+||+ +.++++
T Consensus 216 ~~~--------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 216 DEV--------------------------------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCC--------------------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 000 001123557789999999999999994 555544
No 95
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4e-42 Score=336.01 Aligned_cols=255 Identities=22% Similarity=0.265 Sum_probs=196.7
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
...++|++.++||+|+||.||+|+ ..+++.||+|+++... ......+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~----- 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD----- 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 345689999999999999999998 4568999999996422 2233457889999999999999999998754
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++||||+++|+|.+++.... +++..+..++.||+.||.||| +++|+||||||+|||++.++.+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~~----------l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~ 181 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSNYD----------IPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL 181 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCE
Confidence 347899999999999999986542 457788889999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCC----CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC----EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
||+|||++....... ........||+.|+|||++.+. .++.++|||||||++|||++|..||.+..... .+...
T Consensus 182 kL~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i 259 (370)
T cd05596 182 KLADFGTCMKMDANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKI 259 (370)
T ss_pred EEEeccceeeccCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHH
Confidence 999999998654322 1122345699999999998653 37899999999999999999999997532110 01111
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCC--CCChHHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRE--RMKINDVESR 448 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 448 (473)
.. ... .+ ..+.....+..+.+|+.+||+.+|.+ |||+.|+++.
T Consensus 260 ~~----~~~-~~---------------------------~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 260 MD----HKN-SL---------------------------TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred Hc----CCC-cC---------------------------CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 000 00 00000123567789999999999988 9999999653
No 96
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-41 Score=320.94 Aligned_cols=278 Identities=21% Similarity=0.258 Sum_probs=198.8
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhc---CCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINI---KHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|++.+.||+|+||.||+|. ..+++.||+|.++.... .....+.+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47888999999999999998 45789999999874322 2234566788777665 799999999998665444455
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++|||++ ++|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~-------~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl 149 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPP-------GLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKL 149 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 6899999996 5899988764322 3668899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||+++...... ......||..|+|||++.+..++.++|||||||++|+|++|.+||.+....+ .+.........
T Consensus 150 ~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~ 225 (288)
T cd07863 150 ADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGL 225 (288)
T ss_pred CccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCC
Confidence 9999998654321 1223457999999999998889999999999999999999999997543221 11111111100
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
............. . ..................+..+.+|+.+||+.||++|||+.|++.
T Consensus 226 ~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 226 PPEDDWPRDVTLP---R------GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CChhhCccccccc---c------cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 0 000000000011111235667889999999999999999999874
No 97
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.7e-42 Score=333.78 Aligned_cols=202 Identities=23% Similarity=0.356 Sum_probs=171.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|. ..+++.||+|+++... ......+.+|+.++.+++||||+++++.+.+ ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 478899999999999999998 4568999999997432 2233567889999999999999999999754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~ 143 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD---------TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLS 143 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEe
Confidence 899999999999999997654 3568899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc---------------------------------cceeeccCCCCcCCCccccCCCCCcccchhhHh
Q 012014 301 DFGMARFLPAIDKQ---------------------------------NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFG 347 (473)
Q Consensus 301 Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 347 (473)
|||+++.+...... .......||+.|+|||++.+..++.++||||||
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 99998754321100 011235699999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCC
Q 012014 348 ILLLEMFTGIRPSDGI 363 (473)
Q Consensus 348 ~il~elltg~~P~~~~ 363 (473)
|++|||++|..||.+.
T Consensus 224 vil~ell~G~~Pf~~~ 239 (363)
T cd05628 224 VIMYEMLIGYPPFCSE 239 (363)
T ss_pred HHHHHHHhCCCCCCCC
Confidence 9999999999999753
No 98
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3e-42 Score=335.63 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=199.0
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.+.||+|+||.||+|.. .+++.||+|+++... ......+.+|+.++..++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 4789999999999999999994 478999999997432 2344568899999999999999999998754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~ 143 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD---------VFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLA 143 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEee
Confidence 899999999999999997653 3568889999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccc---------------------------cccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHH
Q 012014 301 DFGMARFLPAID---------------------------KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353 (473)
Q Consensus 301 Dfg~~~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 353 (473)
|||++....... .........||+.|+|||++.+..++.++|||||||++|||
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 223 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEM 223 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhh
Confidence 999998654322 00122345689999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhccc
Q 012014 354 FTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSA 433 (473)
Q Consensus 354 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 433 (473)
++|..||........ ....... .... .. +.....+..+.+|+.+||.
T Consensus 224 l~g~~Pf~~~~~~~~-~~~i~~~--~~~~-~~-----------------------------p~~~~~~~~~~~li~~ll~ 270 (350)
T cd05573 224 LYGFPPFYSDTLQET-YNKIINW--KESL-RF-----------------------------PPDPPVSPEAIDLICRLLC 270 (350)
T ss_pred ccCCCCCCCCCHHHH-HHHHhcc--CCcc-cC-----------------------------CCCCCCCHHHHHHHHHHcc
Confidence 999999976431110 0000000 0000 00 0000135678899999997
Q ss_pred CCCCCCCC-hHHHHHH
Q 012014 434 ERPRERMK-INDVESR 448 (473)
Q Consensus 434 ~dP~~RPt-~~ev~~~ 448 (473)
||.+||+ +.|+++.
T Consensus 271 -dp~~R~~s~~~ll~h 285 (350)
T cd05573 271 -DPEDRLGSFEEIKSH 285 (350)
T ss_pred -ChhhcCCCHHHHhcC
Confidence 9999999 9999863
No 99
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-43 Score=302.28 Aligned_cols=252 Identities=21% Similarity=0.324 Sum_probs=200.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC----CCc----hhHHHHHHHHHhc-CCCCceeeeeeeecc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP----GGS----KSFKSECKAAINI-KHRNIVRVFTAFSGV 213 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 213 (473)
.+.|...+.||.|..+.|-++. ..+|..+|+|++..... ... +.-.+|+.||+++ .||+|+++.++|
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y--- 92 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY--- 92 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec---
Confidence 3467788899999999999887 56789999999974322 112 3356799999998 699999999996
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
++..+.++|+|.|+.|.|.++|...- .+++++..+|++|+..|++||| .++||||||||+|||+++
T Consensus 93 --es~sF~FlVFdl~prGELFDyLts~V---------tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 --ESDAFVFLVFDLMPRGELFDYLTSKV---------TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDD 158 (411)
T ss_pred --cCcchhhhhhhhcccchHHHHhhhhe---------eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeecc
Confidence 44568999999999999999998765 5779999999999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccC------CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG------CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~ 367 (473)
+.++||+|||+|+.+..+ ......+|||+|.|||.+.. ..|+..+|+||+|||+|.|+.|.+||-... +
T Consensus 159 n~~i~isDFGFa~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--Q 233 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--Q 233 (411)
T ss_pred ccceEEeccceeeccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--H
Confidence 999999999999988653 44556789999999998753 358889999999999999999999996411 0
Q ss_pred ccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 368 MNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+ -+++....+.... ..+.=.+......+|+.+||+.||.+|.|++|.+.
T Consensus 234 m---lMLR~ImeGkyqF----------------------------~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 234 M---LMLRMIMEGKYQF----------------------------RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred H---HHHHHHHhccccc----------------------------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 0 1111111111100 00111245678889999999999999999999875
Q ss_pred H
Q 012014 448 R 448 (473)
Q Consensus 448 ~ 448 (473)
.
T Consensus 283 H 283 (411)
T KOG0599|consen 283 H 283 (411)
T ss_pred C
Confidence 3
No 100
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=329.62 Aligned_cols=240 Identities=21% Similarity=0.245 Sum_probs=192.3
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+..|.....+|.|+|+.|-.+. ..+++..++|++... ...-.+|+.++... +||||+++.+.+.+ ...
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYED-----GKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecC-----Cce
Confidence 35678888889999999999988 667899999998754 22345677665555 79999999999743 557
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe-cCCccEEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL-DDEMIGHV 299 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~-~~~~~~kl 299 (473)
.|+|||++.++-|.+.+.... .+ ..++..|+++|+.|+.||| ++|+|||||||+|||+ ++.++++|
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~---------~~-~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrl 457 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP---------EF-CSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRL 457 (612)
T ss_pred eeeeehhccccHHHHHHHhcc---------hh-HHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEE
Confidence 899999999999988887654 23 3677889999999999999 9999999999999999 68999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||.++..... ....+-|..|.|||++....|+.++||||||++||+|++|+.||.....+. +.......
T Consensus 458 tyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~----ei~~~i~~ 528 (612)
T KOG0603|consen 458 TYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI----EIHTRIQM 528 (612)
T ss_pred EEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH----HHHHhhcC
Confidence 999999876543 233445889999999999999999999999999999999999998654441 11111111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.. ....+...++|+..||+.||.+||++.++..
T Consensus 529 ~~~----------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 529 PKF----------------------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred Ccc----------------------------------ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111 1235567789999999999999999999854
No 101
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.4e-42 Score=337.37 Aligned_cols=202 Identities=22% Similarity=0.311 Sum_probs=169.6
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.++||+|+||.||++. ..+++.||+|++.... ......+.+|++++..++||||++++++|.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 478899999999999999998 4578999999986422 2234567889999999999999999999854 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~ 143 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD---------TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLS 143 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEe
Confidence 899999999999999997653 3557888899999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc------------c---------------------------------ceeeccCCCCcCCCccccCC
Q 012014 301 DFGMARFLPAIDKQ------------N---------------------------------RFICIKGSTGYIPPEYDLGC 335 (473)
Q Consensus 301 Dfg~~~~~~~~~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~ 335 (473)
|||+++.+...... . ......||+.|+|||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999643211000 0 00124699999999999998
Q ss_pred CCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 336 EASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 336 ~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
.++.++|||||||++|||++|..||.+.
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 224 GYGQECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred CCCCceeeEecchhhhhhhcCCCCCCCC
Confidence 9999999999999999999999999753
No 102
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-42 Score=333.51 Aligned_cols=241 Identities=18% Similarity=0.225 Sum_probs=190.0
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
+.||+|+||.||++. ..+++.||+|+++... ......+.+|++++..++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 469999999999998 4578999999997432 2233567789999999999999999998754 346899999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
|+++|+|.+++.... .+++..+..++.||+.||.||| + ++|+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~ 143 (325)
T cd05594 76 YANGGELFFHLSRER---------VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 143 (325)
T ss_pred CCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCC
Confidence 999999999987653 3568899999999999999999 7 79999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ...........
T Consensus 144 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~~~~--- 213 (325)
T cd05594 144 KEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEI--- 213 (325)
T ss_pred eecCCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhcCCC---
Confidence 7532211 1223356999999999999989999999999999999999999999753211 11100000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..+...+..+.+|+.+||+.||++|+ ++.++++
T Consensus 214 -----------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 214 -----------------------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 00012345678899999999999997 8888875
No 103
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=330.74 Aligned_cols=266 Identities=24% Similarity=0.345 Sum_probs=216.2
Q ss_pred CchhhhhcccCCCCccceeecCCCeEEEEEEecC-CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeecc
Q 012014 135 PSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV 213 (473)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 213 (473)
+.+++|+..-.+....++||-|.||.||.|.|.. .-.||||.++.. .-..++|..|+.+|+.++|||+|+++|+|...
T Consensus 257 Pn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 257 PNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred CCcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 3456677777777788999999999999999654 567999998742 23467899999999999999999999999653
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
...|||+|||..|+|.+||+..... .++.-..+.++.||++|++||. .+++|||||...|+|+.+
T Consensus 336 -----pPFYIiTEfM~yGNLLdYLRecnr~-------ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgE 400 (1157)
T KOG4278|consen 336 -----PPFYIITEFMCYGNLLDYLRECNRS-------EVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGE 400 (1157)
T ss_pred -----CCeEEEEecccCccHHHHHHHhchh-------hcchhHHHHHHHHHHHHHHHHH---Hhhhhhhhhhhhhccccc
Confidence 3579999999999999999877543 2334556788999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHH
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~ 372 (473)
+..+|++|||+++++...... ......-...|.|||-+....++.|+|||+|||+|||+.| |..||.++.- .+
T Consensus 401 nhiVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----Sq 474 (1157)
T KOG4278|consen 401 NHIVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ 474 (1157)
T ss_pred cceEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----HH
Confidence 999999999999987543322 1122223567999999999999999999999999999999 9999987422 11
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
+...++.+.+| +.+..|++.+++||..||+++|.+||++.||-+.++.+
T Consensus 475 -----------------VY~LLEkgyRM--------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 475 -----------------VYGLLEKGYRM--------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred -----------------HHHHHhccccc--------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 11222333333 34456899999999999999999999999999999988
Q ss_pred H
Q 012014 453 R 453 (473)
Q Consensus 453 ~ 453 (473)
.
T Consensus 524 f 524 (1157)
T KOG4278|consen 524 F 524 (1157)
T ss_pred h
Confidence 5
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.5e-42 Score=330.09 Aligned_cols=241 Identities=22% Similarity=0.280 Sum_probs=189.4
Q ss_pred ceeecCCCeEEEEEEe----cCCCEEEEEEeeccC----CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 151 NLIGAGNFGSVYNGTL----FDGTTIAVKVFNLIR----PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++||+|+||.||+++. .+++.||+|+++... ......+.+|+.++..++||||++++++|... ...+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG-----GKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-----CeEE
Confidence 5799999999999984 357899999987422 22334577899999999999999999998543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 77 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 144 (323)
T cd05584 77 LILEYLSGGELFMHLEREG---------IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDF 144 (323)
T ss_pred EEEeCCCCchHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeC
Confidence 9999999999999997654 2457788889999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... ...........
T Consensus 145 g~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~~~ 217 (323)
T cd05584 145 GLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKGKL 217 (323)
T ss_pred cCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCC
Confidence 9987542221 1223356899999999999888999999999999999999999999753211 11111100000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..+...+..+.+|+.+||+.||++|| ++.++++
T Consensus 218 --------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 --------------------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --------------------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 00112345678999999999999999 7777765
No 105
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=344.54 Aligned_cols=259 Identities=24% Similarity=0.444 Sum_probs=214.8
Q ss_pred cCCCCccceeecCCCeEEEEEEec----CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+...+.++||.|.||+||+|+++ ....||||.++.... .....|+.|+.||.+++||||+++-|+... .
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-----s 702 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-----S 702 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-----C
Confidence 344568899999999999999843 245799999986543 345679999999999999999999999743 4
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+||+|||++|+|+.||+.+.. .|++-+...+++.|+.|+.||- +.++|||||...|||++.+..+|
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DG--------qftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCC--------ceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEE
Confidence 578999999999999999998864 3778899999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccC--CCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKG--STGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~ 375 (473)
++|||+++.+.+.. ....++.-| ..+|.|||.+....++.+|||||||++|||.++ |..||-.+.+.+.
T Consensus 772 VsDFGLSRvledd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV------- 843 (996)
T KOG0196|consen 772 VSDFGLSRVLEDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV------- 843 (996)
T ss_pred eccccceeecccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH-------
Confidence 99999999886544 222222223 367999999999999999999999999999888 9999976544331
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
...++.+.+. +.+++||..|.+||..||++|-.+||++.+|+..|.++-+.
T Consensus 844 ---------------IkaIe~gyRL--------------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 844 ---------------IKAIEQGYRL--------------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred ---------------HHHHHhccCC--------------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 1122222221 34578999999999999999999999999999999999654
No 106
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.1e-41 Score=316.63 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=198.0
Q ss_pred CCccceeecCCCeEEEEEEecC-CC--EEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCcee
Q 012014 147 FSSANLIGAGNFGSVYNGTLFD-GT--TIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGARF 220 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 220 (473)
|.+.++||+|+||.||+|...+ +. .+|+|.++... ....+.+.+|+.++..++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999998543 33 68999886432 2234568899999999999999999998754321 22235
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+++|+|.+++....... ....+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~ 154 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGD---CPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVA 154 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccC---CcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEEC
Confidence 789999999999999885332111 0113668889999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+++...............+++.|+|||...+..++.++||||||+++|||++ |..||.+.... .+......
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~--- 229 (272)
T cd05075 155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQ--- 229 (272)
T ss_pred CCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc---
Confidence 9999987643322111222345778999999998889999999999999999999 88998753221 11111100
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.... .....++..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 230 ~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNRL-------------------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC-------------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 00112345688999999999999999999999999875
No 107
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-41 Score=319.05 Aligned_cols=260 Identities=22% Similarity=0.348 Sum_probs=201.7
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCC----EEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGT----TIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
.++|...++||+|+||.||+|.+ .+++ .||+|+++.... .....+.+|+.++..++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC----
Confidence 45788999999999999999984 3444 489999864322 2345688999999999999999999987532
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
..++++||+++|+|.+++..... .+++..++.++.|++.||.||| +++|+||||||+||++++++.+
T Consensus 82 --~~~l~~~~~~~g~l~~~l~~~~~--------~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~ 148 (279)
T cd05109 82 --TVQLVTQLMPYGCLLDYVRENKD--------RIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHV 148 (279)
T ss_pred --CcEEEEEcCCCCCHHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcE
Confidence 35799999999999999976432 3568899999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||....... +...+..
T Consensus 149 kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~ 226 (279)
T cd05109 149 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLLEK 226 (279)
T ss_pred EECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHC
Confidence 9999999987643322211222235678999999988889999999999999999998 999986532111 1111110
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHhh
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRKL 456 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~~ 456 (473)
.... .....++..+.+++.+||+.||++|||+.++++.|+.+..+.
T Consensus 227 ~~~~----------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 227 GERL----------------------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCcC----------------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0000 001124557889999999999999999999999998886543
No 108
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-41 Score=328.45 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=193.2
Q ss_pred CCCccceeecCCCeEEEEEEe----cCCCEEEEEEeeccC----CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccC
Q 012014 146 GFSSANLIGAGNFGSVYNGTL----FDGTTIAVKVFNLIR----PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 216 (473)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+.++..+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 488899999999999999874 357899999987422 22345678899999999 59999999988754
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
....++||||+++|+|.+++.... .+++.++..++.||+.||.||| +++|+||||||+|||++.++.
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~ 143 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRD---------NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGH 143 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCC
Confidence 346799999999999999997653 3568889999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
+||+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...+..
T Consensus 144 ~kl~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~ 221 (332)
T cd05614 144 VVLTDFGLSKEFLSEE-KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSR 221 (332)
T ss_pred EEEeeCcCCccccccC-CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHH
Confidence 9999999998653322 1222345699999999998865 478899999999999999999999975322111 111111
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
...... ...+...+..+.+++.+||+.||++|| +++++++
T Consensus 222 ~~~~~~--------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 222 RILKCD--------------------------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHhcCC--------------------------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 000000 000112345678899999999999999 6667764
No 109
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=327.98 Aligned_cols=264 Identities=23% Similarity=0.281 Sum_probs=209.2
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
+...+.++||+|-||+|.++....+..||||.++..... ....|.+|+++|.+|+|||||+++|+|...+ .+++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Picm 612 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLCM 612 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chHH
Confidence 445678899999999999999877899999999854433 3478999999999999999999999997644 6799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
++||+++|+|.+|+..+.... ........|+.||+.|++||. +.++|||||.+.|+|++.++++||+|||
T Consensus 613 I~EYmEnGDLnqFl~aheapt-------~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfg 682 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPT-------AETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFG 682 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcc-------cccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcc
Confidence 999999999999999885432 224456679999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh--CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT--GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
+++-+-..+.........-..+|||||.+.-++++++||||+||+++||+++ ...||....+.+.. +.
T Consensus 683 msR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv----------en 752 (807)
T KOG1094|consen 683 MSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV----------EN 752 (807)
T ss_pred cccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH----------Hh
Confidence 9996654443333222334678999999999999999999999999999876 78899765443310 11
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..++++..-.+ .-...+.-|+..+.+|+.+||+.|-.+|||+++|...|+..
T Consensus 753 ~~~~~~~~~~~-------------------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 753 AGEFFRDQGRQ-------------------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhhcCCCCcc-------------------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111111000 00112345889999999999999999999999999888764
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.9e-41 Score=320.07 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=195.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
+|++.++||+|+||.||++. ..+++.||+|++..... .....+.+|+.+++.++||||+++++.+.. ....
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-----CCeE
Confidence 47888999999999999998 45689999999864321 223457789999999999999999998754 3368
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++|+|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||++++++.++|+|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~D 145 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNP-------GFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEee
Confidence 9999999999999988654321 3668899999999999999999 89999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... ......|++.|+|||++.+..++.++||||+||++|+|++|..||.+..... ....+... ....
T Consensus 146 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~ 220 (285)
T cd05605 146 LGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVERR-VKED 220 (285)
T ss_pred CCCceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHHH-hhhc
Confidence 99998654322 1223468999999999998889999999999999999999999997532211 00011000 0000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
. ...+...+..+.+|+.+||+.||++|| ++.++++
T Consensus 221 ~-------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 221 Q-------------------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred c-------------------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0 000122456788999999999999999 7777754
No 111
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.9e-42 Score=319.10 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=197.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|++.+.||+|+||.||+|. ..+++.||+|++..........+.+|+.++.+++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----EKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----CEEE
Confidence 3579999999999999999999 467899999999755444556788999999999999999999998543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++.... .+++.++..++.|++.||.||| +++|+||||||+||+++.++.+||+||
T Consensus 83 iv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG---------PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcC
Confidence 9999999999999986543 2558889999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|++....... .......|++.|+|||.+. ...++.++|||||||++|||++|..||.......... .+..
T Consensus 151 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-~~~~---- 223 (267)
T cd06646 151 GVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMSK---- 223 (267)
T ss_pred ccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-eeec----
Confidence 9998653321 1122345889999999874 3457889999999999999999999986432111000 0000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.. ...+. .......+..+.+++.+||+.||++|||+++|++.
T Consensus 224 ~~---~~~~~------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 224 SN---FQPPK------------------------LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CC---CCCCC------------------------CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00 00000 00001234678899999999999999999999864
No 112
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2e-41 Score=314.90 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=197.9
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
++|.+.+.||+|+||.||+|...++..+|+|.++... ...+.+.+|+.++.+++||||+++++++... ...+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CCcEEE
Confidence 4688889999999999999987677789999886432 3356789999999999999999999998543 356999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+.+|+|.+++..... .+++.+++.++.||+.||.||| +++++|+||||+||+++.++.+||+|||.
T Consensus 78 ~e~~~~~~l~~~i~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~ 146 (256)
T cd05113 78 TEYMSNGCLLNYLREHGK--------RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGL 146 (256)
T ss_pred EEcCCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCcc
Confidence 999999999999976432 3568899999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ...........
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~~--- 220 (256)
T cd05113 147 SRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLRL--- 220 (256)
T ss_pred ceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCCC---
Confidence 876533221 11122235678999999988889999999999999999998 999986532211 00000000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
..+...+..+.+++.+||+.||.+|||+.+|++.|+
T Consensus 221 -------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 -------------------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -------------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000113467889999999999999999999998764
No 113
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.3e-41 Score=331.97 Aligned_cols=270 Identities=21% Similarity=0.250 Sum_probs=204.8
Q ss_pred hhcccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcC-CCCceeeeeeee
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIK-HRNIVRVFTAFS 211 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 211 (473)
+....++|.+.++||+|+||.||+|++. .++.||+|+++.... .....+.+|+.++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 4555667889999999999999999853 246899999975322 22346889999999997 999999999985
Q ss_pred ccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC----------------------------------------------
Q 012014 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW---------------------------------------------- 245 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---------------------------------------------- 245 (473)
.. ...++||||+++|+|.+++........
T Consensus 112 ~~-----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 112 KG-----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred cC-----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 43 367999999999999999975432000
Q ss_pred -------------------------------------------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeec
Q 012014 246 -------------------------------------------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHC 282 (473)
Q Consensus 246 -------------------------------------------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~ 282 (473)
......+++..++.++.|++.||.||| +++++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcc
Confidence 001123667788999999999999999 9999999
Q ss_pred cCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCC
Q 012014 283 NLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSD 361 (473)
Q Consensus 283 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~ 361 (473)
||||+|||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999986533221111223346788999999998889999999999999999998 889986
Q ss_pred CCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 362 GIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
.....+. +...+. .+. ....+..++..+.+|+.+||+.||.+||+
T Consensus 344 ~~~~~~~-~~~~~~---~~~-------------------------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs 388 (401)
T cd05107 344 ELPMNEQ-FYNAIK---RGY-------------------------------RMAKPAHASDEIYEIMQKCWEEKFEIRPD 388 (401)
T ss_pred CCCchHH-HHHHHH---cCC-------------------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 5322111 000000 000 00001124567899999999999999999
Q ss_pred hHHHHHHHHHH
Q 012014 442 INDVESRLRLI 452 (473)
Q Consensus 442 ~~ev~~~L~~l 452 (473)
++||++.|+.+
T Consensus 389 ~~ell~~L~~~ 399 (401)
T cd05107 389 FSQLVHLVGDL 399 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999999886
No 114
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.6e-42 Score=324.79 Aligned_cols=269 Identities=23% Similarity=0.340 Sum_probs=204.0
Q ss_pred hcccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeec
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSG 212 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 212 (473)
....++|++.+.||+|+||.||++... ....+|+|.+..... .....+.+|+.++.++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 344567899999999999999999843 236799998874321 2234588999999999 89999999998754
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCCC-------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLK 285 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlk 285 (473)
. ...+++|||+++|+|.+++......... .....+++..++.++.|++.||.||| +++|+|||||
T Consensus 88 ~-----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlk 159 (293)
T cd05053 88 E-----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLA 159 (293)
T ss_pred C-----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccc
Confidence 3 3679999999999999999754311000 11224778999999999999999999 9999999999
Q ss_pred CCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCC
Q 012014 286 PSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIF 364 (473)
Q Consensus 286 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~ 364 (473)
|+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 9999999999999999999987654322222222335678999999988889999999999999999998 999987532
Q ss_pred CCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 365 TGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
..+ .......... ...+..++..+.+|+.+||+.||++|||+.|
T Consensus 240 ~~~-----~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 283 (293)
T cd05053 240 VEE-----LFKLLKEGYR-------------------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQ 283 (293)
T ss_pred HHH-----HHHHHHcCCc-------------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHH
Confidence 111 1100000000 0001124567889999999999999999999
Q ss_pred HHHHHHHHH
Q 012014 445 VESRLRLIR 453 (473)
Q Consensus 445 v~~~L~~l~ 453 (473)
|++.|+.+.
T Consensus 284 il~~l~~~~ 292 (293)
T cd05053 284 LVEDLDRML 292 (293)
T ss_pred HHHHHHHhh
Confidence 999998873
No 115
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6e-42 Score=329.45 Aligned_cols=241 Identities=21% Similarity=0.243 Sum_probs=188.9
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCC-CceeeeeeeeccccCCcee
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHR-NIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 220 (473)
+|++.+.||+|+||.||+|.. .+++.||+|+++.. .....+.+..|..++..++|+ +|+++++++.+. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-----DR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----CE
Confidence 578899999999999999984 46789999999743 223445678899999999765 588888887543 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~---------~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~ 143 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG---------KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIA 143 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEe
Confidence 899999999999999997654 3558889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... ........
T Consensus 144 Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----~~~~i~~~ 216 (324)
T cd05587 144 DFGMCKENIFG--GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----LFQSIMEH 216 (324)
T ss_pred ecCcceecCCC--CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----HHHHHHcC
Confidence 99998743221 122334569999999999999899999999999999999999999997532111 11100000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
.. ..+...+..+.+++.+||..||.+||+.
T Consensus 217 ~~--------------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 217 NV--------------------------------SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CC--------------------------------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 0001234567899999999999999986
No 116
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-41 Score=319.50 Aligned_cols=269 Identities=21% Similarity=0.308 Sum_probs=207.5
Q ss_pred ccCCCCccceeecCCCeEEEEEEecC-----CCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccC
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFD-----GTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 216 (473)
..++|.+.++||+|+||.||+|.... +..|++|+++... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 34678999999999999999999654 6889999886432 22345688999999999999999999987542
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
....++++||+++|+|.+++......... ....+++.++..++.|++.||.||| +++++||||||+||++++++.
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEAN-NPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccc-cccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCc
Confidence 34678999999999999999765322110 1124778999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~ 375 (473)
+||+|||+++.+.............++..|+|||++.+..++.++||||||+++||+++ |..||...... .+.....
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~ 233 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--EMAAYLK 233 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--HHHHHHH
Confidence 99999999986543222111122345778999999988889999999999999999999 99999753211 1111111
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
.... ......++..+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus 234 ~~~~----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 DGYR----------------------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cCCC----------------------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 1000 000112456788999999999999999999999999998764
No 117
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.8e-42 Score=329.32 Aligned_cols=238 Identities=23% Similarity=0.259 Sum_probs=186.8
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeecc---CCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLI---RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|+. .+++.||+|+++.. .......+..|..++..+ +||||+++++++... ...++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-----~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP-----DRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC-----CEEEEEE
Confidence 4699999999999984 56899999998742 223345677888888876 699999999997543 4689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 76 Ey~~~g~L~~~i~~~~---------~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~ 143 (320)
T cd05590 76 EFVNGGDLMFHIQKSR---------RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC 143 (320)
T ss_pred cCCCCchHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCC
Confidence 9999999999987654 3558889999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ...........
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~~--- 213 (320)
T cd05590 144 KEGIFN--GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILNDEV--- 213 (320)
T ss_pred eecCcC--CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCCC---
Confidence 753221 12223456899999999999889999999999999999999999999753211 11111100000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
..+...+..+.+|+.+||+.||++||++.+
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 214 -----------------------------VYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 000113456789999999999999999833
No 118
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.9e-41 Score=326.55 Aligned_cols=193 Identities=23% Similarity=0.271 Sum_probs=164.1
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|. ..+++.||+|+++... ......+.+|..++..+ +||||++++++|... ...++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 469999999999998 4568999999997532 22335578899999888 799999999998543 4689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 e~~~~g~L~~~~~~~~---------~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 143 (329)
T cd05588 76 EFVSGGDLMFHMQRQR---------KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMC 143 (329)
T ss_pred eCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccc
Confidence 9999999999886543 3668999999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 144 KEGIRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cccccC--CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 743221 1222345689999999999998999999999999999999999999974
No 119
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-41 Score=332.63 Aligned_cols=203 Identities=25% Similarity=0.319 Sum_probs=170.5
Q ss_pred cccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
...++|++.+.||+|+||.||++.. .+++.+|+|++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~----- 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD----- 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 3456899999999999999999994 468899999986422 2234457899999999999999999999754
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++||||+++|+|.+++.... +++..+..++.||+.||.||| +++|+||||||+|||++.++.+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~~----------~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~ 181 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSNYD----------VPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHL 181 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCE
Confidence 347899999999999999996542 457888999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCC----CCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE----ASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
||+|||++....... ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus 182 kL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 182 KLADFGTCMKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred EEEecccceecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 999999998664322 11223456999999999987543 788999999999999999999999753
No 120
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-41 Score=324.70 Aligned_cols=270 Identities=24% Similarity=0.329 Sum_probs=204.5
Q ss_pred cccCCCCccceeecCCCeEEEEEEec--------CCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFS 211 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 211 (473)
...++|.+.+.||+|+||.||++... +...+|+|.++... ......+.+|+.++..+ +||||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 34568999999999999999999732 23569999987432 22335688899999999 7999999999985
Q ss_pred ccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC-------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW-------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
.. ...++||||+++|+|.+++........ ......+++.+++.++.|++.||+||| ++|++||||
T Consensus 95 ~~-----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dl 166 (307)
T cd05098 95 QD-----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDL 166 (307)
T ss_pred cC-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccc
Confidence 43 367999999999999999976532110 001123678899999999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 363 (473)
||+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 167 kp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred cHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999976543221111222234578999999988889999999999999999998 88888642
Q ss_pred CCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 364 FTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.. ........... ....+...+..+.+|+.+||+.+|++|||+.
T Consensus 247 ~~-----~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 290 (307)
T cd05098 247 PV-----EELFKLLKEGH-------------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 290 (307)
T ss_pred CH-----HHHHHHHHcCC-------------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHH
Confidence 11 11111000000 0001123456888999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012014 444 DVESRLRLIRRK 455 (473)
Q Consensus 444 ev~~~L~~l~~~ 455 (473)
+|++.|+.+...
T Consensus 291 evl~~l~~~~~~ 302 (307)
T cd05098 291 QLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHHHH
Confidence 999999998765
No 121
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.4e-41 Score=315.54 Aligned_cols=255 Identities=24% Similarity=0.399 Sum_probs=201.1
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.++|.+.++||+|+||.||+|...+...||+|+++... ...+.+.+|+.++..++||||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcEE
Confidence 45799999999999999999987666789999987432 234678999999999999999999987632 24689
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++|+|.+++...... .+++..+..++.|++.||.||| +++++||||||+||++++++.+||+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg 147 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGK-------YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 147 (262)
T ss_pred EEEcCCCCcHHHHHhhcccc-------CCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCC
Confidence 99999999999999754321 3568889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
.++....... .......++..|+|||+..+..++.++||||||+++|+|++ |..||.+..... .........
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~~~~~~- 220 (262)
T cd05071 148 LARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQVERGY- 220 (262)
T ss_pred ceeecccccc-ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHHHhcCC-
Confidence 9986643321 11122346778999999988889999999999999999999 888986532111 000000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
........+..+.+|+.+||+.||++|||+.++++.|+..
T Consensus 221 ------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 ------------------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ------------------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0001123566788999999999999999999999998864
No 122
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-41 Score=316.33 Aligned_cols=254 Identities=25% Similarity=0.405 Sum_probs=200.5
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.++|++.++||+|+||.||+|...++..+|+|.++.... ..+.+.+|+.++++++|||++++++++.. ...++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcEE
Confidence 457899999999999999999977788899999875332 34678999999999999999999988632 24689
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++++|.+++...... .+++.++..++.|++.||.||| +++++||||||+||++++++.++|+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg 147 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGR-------ALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFG 147 (260)
T ss_pred EEEecCCCcHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCce
Confidence 99999999999999764321 3568899999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+ ..........
T Consensus 148 ~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~ 221 (260)
T cd05070 148 LARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-----VLEQVERGYR 221 (260)
T ss_pred eeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCC
Confidence 99865432211 1112235668999999988889999999999999999999 899997532111 1110000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
.+.+...+..+.+|+.+||+.||++|||+.++.+.|+.
T Consensus 222 -------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 -------------------------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------------------------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00011245678899999999999999999999998874
No 123
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-41 Score=319.80 Aligned_cols=263 Identities=22% Similarity=0.362 Sum_probs=200.6
Q ss_pred CCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
.+|.+.+.||+|+||.||+|... +++.||+|+++..... ....+.+|+.++..++||||+++++++.+.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~---- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE---- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----
Confidence 35778899999999999999843 2478999998743322 235688999999999999999999998543
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCC-------CCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDT-------NWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
...++++||+++++|.+++...... ........+++..+..++.|++.||.||| +++|+||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil 156 (283)
T cd05091 81 -QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVL 156 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheE
Confidence 3578999999999999998543211 00111224668889999999999999999 999999999999999
Q ss_pred ecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCccc
Q 012014 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMN 369 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~ 369 (473)
+++++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.+....
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--- 233 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--- 233 (283)
T ss_pred ecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 99999999999999886544332222233346788999999988889999999999999999998 88888753221
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
............ ..+..++..+.+|+..||+.||++|||+.+|+..|
T Consensus 234 --~~~~~i~~~~~~-------------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l 280 (283)
T cd05091 234 --DVIEMIRNRQVL-------------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280 (283)
T ss_pred --HHHHHHHcCCcC-------------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence 111111111000 01123566788999999999999999999999998
Q ss_pred HH
Q 012014 450 RL 451 (473)
Q Consensus 450 ~~ 451 (473)
+.
T Consensus 281 ~~ 282 (283)
T cd05091 281 RT 282 (283)
T ss_pred hC
Confidence 74
No 124
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-41 Score=317.16 Aligned_cols=246 Identities=22% Similarity=0.275 Sum_probs=189.4
Q ss_pred eecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||+|+||.||++. ..+|+.||+|.+.... ......+..|++++.+++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 6999999999998 4568999999986322 1223445679999999999999999998754 34789999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.++|+|||++...
T Consensus 76 ~g~~L~~~~~~~~~~-------~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~ 145 (277)
T cd05607 76 NGGDLKYHIYNVGER-------GLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVEL 145 (277)
T ss_pred CCCCHHHHHHhcccc-------CCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeec
Confidence 999999988654322 3557888999999999999999 999999999999999999999999999999765
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... ......||..|+|||++.+..++.++|||||||++|+|++|..||........ ...............
T Consensus 146 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~---- 217 (277)
T cd05607 146 KDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRTLEDEVKF---- 217 (277)
T ss_pred CCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHhhcccccc----
Confidence 4321 22334689999999999988899999999999999999999999975322111 011111000000000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.....+.++.+|+..||+.||++|||++|+++.
T Consensus 218 ---------------------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 218 ---------------------------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred ---------------------------ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 001235578899999999999999999887643
No 125
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.9e-41 Score=326.30 Aligned_cols=193 Identities=23% Similarity=0.271 Sum_probs=163.2
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|. ..+++.||+|+++... ......+.+|+.++.++ +||||+++++++... ...++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC-----CEEEEEE
Confidence 469999999999998 4568899999997532 22334577888888776 899999999997543 4689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 E~~~~~~L~~~~~~~~---------~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~ 143 (329)
T cd05618 76 EYVNGGDLMFHMQRQR---------KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC 143 (329)
T ss_pred eCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 9999999999886553 3568899999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 144 KEGLRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccccCC--CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 753221 1122345689999999999999999999999999999999999999964
No 126
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.3e-41 Score=322.12 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=201.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 214 (473)
..++|.+.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 111 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG- 111 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC-
Confidence 3457999999999999999999731 24579999887432 22335688999999999 799999999998543
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
...+++|||+++|+|.+++...... .+++.++..++.|++.||.||| +++|+|+||||+||+++.+
T Consensus 112 ----~~~~lv~e~~~~~~L~~~i~~~~~~-------~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~ 177 (302)
T cd05055 112 ----GPILVITEYCCYGDLLNFLRRKRES-------FLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHG 177 (302)
T ss_pred ----CceEEEEEcCCCCcHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCC
Confidence 3579999999999999999754321 2568899999999999999999 8999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~ 373 (473)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|+|++ |..||.+...... +...
T Consensus 178 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~ 256 (302)
T cd05055 178 KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKL 256 (302)
T ss_pred CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHH
Confidence 9999999999986543321111122345778999999998889999999999999999998 9999875432111 1010
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.....+. ..+...+..+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 257 ~~~~~~~----------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRM----------------------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcC----------------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0000000 00011245788999999999999999999999999874
No 127
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-41 Score=331.57 Aligned_cols=286 Identities=17% Similarity=0.192 Sum_probs=198.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
..++|++.+.||+|+||.||++. ..+|+.||+|++.... ......+.+|+.++..++||||+++++++..... ...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 45789999999999999999998 4568999999986432 2334567899999999999999999999854331 122
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||++ ++|.+.+.. .++...+..++.|++.||.||| +++|+||||||+|||++.++.+|
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~-----------~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~k 163 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM-----------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 163 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc-----------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEE
Confidence 35799999995 467776643 2447788899999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... .+........
T Consensus 164 l~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~ 239 (359)
T cd07876 164 ILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLG 239 (359)
T ss_pred EecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999999754321 12233458999999999999899999999999999999999999998643211 1111111111
Q ss_pred Ccchhhhccccc--hHHHHhhhhhhcccc-----cCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 PQRAEEVVDDFN--LQEIEEGRTMCMEVS-----SSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. ...+..+... ...+........... ..................+.+|+.+||..||++|||+.|+++.
T Consensus 240 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 240 T-PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred C-CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1 0011100000 000000000000000 0000000000111235678899999999999999999999873
No 128
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-41 Score=325.37 Aligned_cols=240 Identities=23% Similarity=0.314 Sum_probs=185.9
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHh-cCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAIN-IKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|.. .+++.||+|+++... ....+.+..|..++.. .+||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 4699999999999984 568899999997432 2233455667777665 489999999998754 34689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 e~~~gg~L~~~~~~~~---------~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a 143 (316)
T cd05592 76 EYLNGGDLMFHIQSSG---------RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMC 143 (316)
T ss_pred cCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCC
Confidence 9999999999987653 3568888999999999999999 899999999999999999999999999999
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ..........
T Consensus 144 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~~i~~~~---- 212 (316)
T cd05592 144 KENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFDSILNDR---- 212 (316)
T ss_pred eECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCC----
Confidence 7543222 2223456899999999999988999999999999999999999999763221 1111000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH-HHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN-DVE 446 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~ 446 (473)
+..+...+..+.+|+.+||+.||.+||++. +++
T Consensus 213 ----------------------------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 213 ----------------------------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ----------------------------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 000112345677899999999999999975 453
No 129
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.9e-41 Score=327.12 Aligned_cols=270 Identities=21% Similarity=0.283 Sum_probs=202.1
Q ss_pred ccCCCCccceeecCCCeEEEEEEe------cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL------FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 214 (473)
..++|++.++||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 346899999999999999999973 3468899999874322 2234678999999999 689999999987542
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCC------------------------------------------------
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR------------------------------------------------ 246 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------------------------------------------------ 246 (473)
....+++|||+++|+|.+++.........
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 84 ---GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ---CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 23578999999999999999754210000
Q ss_pred ----------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccccc
Q 012014 247 ----------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316 (473)
Q Consensus 247 ----------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 316 (473)
.....+++.++..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh
Confidence 00113567888999999999999999 99999999999999999999999999999976533222112
Q ss_pred eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHH
Q 012014 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIE 395 (473)
Q Consensus 317 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (473)
.....++..|+|||.+.+..++.++||||||+++|+|++ |..||........ +...... .....
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~---~~~~~----------- 302 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKE---GTRMR----------- 302 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHhc---cCCCC-----------
Confidence 222345678999999988889999999999999999997 9999875322111 0000000 00000
Q ss_pred hhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 396 EGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
.+...+..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 303 --------------------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 303 --------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 000123467899999999999999999999999998854
No 130
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.7e-42 Score=327.60 Aligned_cols=242 Identities=21% Similarity=0.245 Sum_probs=189.1
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|+. .+++.||+|+++... ......+..|.+++..+ +||||++++++|... ...++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK-----DRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CeEEEEE
Confidence 4699999999999984 468899999987432 23345577888888866 799999999998543 3689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 E~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~ 143 (321)
T cd05591 76 EYVNGGDLMFQIQRSR---------KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMC 143 (321)
T ss_pred eCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccc
Confidence 9999999999987654 3558888999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... ..........
T Consensus 144 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-----~~~~i~~~~~--- 213 (321)
T cd05591 144 KEGILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-----LFESILHDDV--- 213 (321)
T ss_pred eecccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCC---
Confidence 7543221 22234568999999999998899999999999999999999999997532211 1111000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-------ChHHHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-------KINDVESR 448 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~ev~~~ 448 (473)
..+...+.++.+|+.+||+.||++|| +++++++.
T Consensus 214 -----------------------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 -----------------------------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 00011345778999999999999999 77777643
No 131
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-40 Score=310.88 Aligned_cols=261 Identities=20% Similarity=0.297 Sum_probs=205.4
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++|+||+++++++... ..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 67999999999999999999954 78999999886422 22356788999999999999999999998653 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+++|+|.+++...... ...+++.++..++.|++.||.||| +.|++||||+|+||+++.++.++|+
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~ 148 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ-----KRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLG 148 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc-----CCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEe
Confidence 79999999999999998653221 113568899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ ......|++.|+|||.+.+..++.++||||||+++|+|++|..||..... ............
T Consensus 149 d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~ 223 (267)
T cd08224 149 DLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEKC 223 (267)
T ss_pred ccceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhhcC
Confidence 9999876543221 12234588999999999888899999999999999999999999864321 111111110000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
.... ......+..+.+++.+||+.+|++|||+.+|++.|+.+.
T Consensus 224 ~~~~------------------------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 224 DYPP------------------------------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCC------------------------------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0000 001134567889999999999999999999999999874
No 132
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.4e-42 Score=336.74 Aligned_cols=202 Identities=22% Similarity=0.311 Sum_probs=169.6
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|+ ..+++.||+|++.... ......+.+|+.++..++||||+++++.|.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCE
Confidence 478999999999999999998 4568999999986422 2234568899999999999999999999854 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~---------~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~ 143 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG---------IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLT 143 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEE
Confidence 899999999999999997654 2557888889999999999999 9999999999999999999999999
Q ss_pred ecccccccCcccc-----------------------------------------ccceeeccCCCCcCCCccccCCCCCc
Q 012014 301 DFGMARFLPAIDK-----------------------------------------QNRFICIKGSTGYIPPEYDLGCEAST 339 (473)
Q Consensus 301 Dfg~~~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 339 (473)
|||++..+..... ........||+.|+|||++.+..++.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 9999753311000 00011346999999999999989999
Q ss_pred ccchhhHhHHHHHHHhCCCCCCCC
Q 012014 340 YGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 340 ~~DiwSlG~il~elltg~~P~~~~ 363 (473)
++|||||||++|||++|..||.+.
T Consensus 224 ~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 224 LCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred ceeeeeccceeeehhhCCCCCCCC
Confidence 999999999999999999999764
No 133
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.6e-42 Score=336.29 Aligned_cols=201 Identities=22% Similarity=0.312 Sum_probs=168.8
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
+|+..++||+|+||.||+|+ ..+++.||+|++.... ......+.+|+.++..++||||+++++.|.+. ...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~-----~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----DNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC-----CEE
Confidence 58899999999999999998 4578899999987432 22345688999999999999999999998543 468
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++|||||++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~---------~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~D 144 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG---------IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTD 144 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeE
Confidence 99999999999999997653 2557888899999999999999 99999999999999999999999999
Q ss_pred cccccccCcccc---------------------------------------------ccceeeccCCCCcCCCccccCCC
Q 012014 302 FGMARFLPAIDK---------------------------------------------QNRFICIKGSTGYIPPEYDLGCE 336 (473)
Q Consensus 302 fg~~~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~ 336 (473)
||++..+..... ........||+.|+|||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 999753311000 00012346999999999999989
Q ss_pred CCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 337 ASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 337 ~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
++.++|||||||++|||++|..||.+.
T Consensus 225 ~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 225 YTQLCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred CCCeeeEEechHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999763
No 134
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.3e-42 Score=330.91 Aligned_cols=252 Identities=23% Similarity=0.240 Sum_probs=196.1
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.+.||+|+||.||++. ..+++.||+|+++... ......+.+|+.++..++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 478899999999999999998 4578999999997432 2234567899999999999999999998754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++..... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~--------~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~ 144 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED--------QFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLA 144 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEec
Confidence 8999999999999999976522 3668888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCcccc------CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL------GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
|||++..+...... ......||+.|+|||++. +..++.++|||||||++|+|++|..||....... .+....
T Consensus 145 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~ 222 (330)
T cd05601 145 DFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TYNNIM 222 (330)
T ss_pred cCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HHHHHH
Confidence 99999876433211 223346899999999986 4567899999999999999999999997532211 011100
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. ...... +.....+..+.+|+..||+ ||.+|||+.+++.
T Consensus 223 ~~---~~~~~~-----------------------------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 223 NF---QRFLKF-----------------------------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cC---CCccCC-----------------------------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 00 000000 0001234567889999998 9999999999874
No 135
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.7e-41 Score=311.75 Aligned_cols=248 Identities=25% Similarity=0.350 Sum_probs=191.2
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
+.||+|+||.||+|.. .+++.+|+|.+.... ......+.+|+++++.++||||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CCeEEEEeec
Confidence 3699999999999984 578999999876332 22345689999999999999999999998543 3679999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++..... .+++.+++.++.|++.||.||| +++++||||||+||+++.++.+||+|||++...
T Consensus 76 ~~~~L~~~~~~~~~--------~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 76 QGGDFLTFLRTEGP--------RLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred cCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCccc
Confidence 99999999965432 2558889999999999999999 999999999999999999999999999998754
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhcc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVD 387 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (473)
.............++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .........+
T Consensus 145 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~~-------- 214 (252)
T cd05084 145 EDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGVR-------- 214 (252)
T ss_pred ccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCC--------
Confidence 32211111111123456999999998889999999999999999998 888886432110 0000000000
Q ss_pred ccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 388 DFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
...+..++..+.+|+.+||+.||++|||+.+|++.|+
T Consensus 215 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 215 --------------------------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred --------------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0001124567889999999999999999999998875
No 136
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-41 Score=322.88 Aligned_cols=270 Identities=23% Similarity=0.334 Sum_probs=205.9
Q ss_pred cccCCCCccceeecCCCeEEEEEEec--------CCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFS 211 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 211 (473)
...++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+.++..+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34567889999999999999999731 23579999886432 23345788999999999 8999999999975
Q ss_pred ccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCC-------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
.. ...+++|||+++|+|.+++......... .....+++.++..++.||+.||.||| ++|++||||
T Consensus 92 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dl 163 (304)
T cd05101 92 QD-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDL 163 (304)
T ss_pred cC-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeeccc
Confidence 43 3679999999999999999765322110 01124678889999999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 363 (473)
||+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999987654332222233346778999999988889999999999999999998 78888653
Q ss_pred CCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 364 FTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.. ..+......... ...+..++..+.+|+.+||+.+|.+|||+.
T Consensus 244 ~~-----~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 244 PV-----EELFKLLKEGHR-------------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred CH-----HHHHHHHHcCCc-------------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 21 111111000000 000113456788999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012014 444 DVESRLRLIRRK 455 (473)
Q Consensus 444 ev~~~L~~l~~~ 455 (473)
||++.|+.+...
T Consensus 288 e~l~~l~~~~~~ 299 (304)
T cd05101 288 QLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHHHh
Confidence 999999998654
No 137
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9.7e-42 Score=329.85 Aligned_cols=279 Identities=23% Similarity=0.296 Sum_probs=203.1
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC-C-----CCceeeeeeeeccccCCc
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK-H-----RNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 218 (473)
+|.+.++||+|+||.|.+|. ..+++.||||+++... ....+-..|+.+|..|+ | -|+|+++++|...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr----- 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR----- 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc-----
Confidence 68899999999999999998 5679999999998533 23455678999999996 3 4899999998653
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC--cc
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE--MI 296 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~--~~ 296 (473)
.+.|||+|.+ ..+|.++|+.+.-. .|+...+..++.||+.||.+|| ..+|||+||||+|||+.+. ..
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f~-------Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKFR-------GLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCc
Confidence 4789999999 66999999988754 4778999999999999999999 9999999999999999643 37
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
+||+|||.|+..... ..+..-+..|+|||++.|.+|+.+.||||||||++||++|.+.|.|....+ .+..+...
T Consensus 330 vKVIDFGSSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D-Ql~~I~e~ 403 (586)
T KOG0667|consen 330 IKVIDFGSSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD-QLARIIEV 403 (586)
T ss_pred eeEEecccccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH-HHHHHHHH
Confidence 999999999875332 224456889999999999999999999999999999999988888753322 22222211
Q ss_pred h-cC-c-------chhhhccc-------cchHH---------HHhhhhh-hcccccC-CCCcchhhHHHHHHHHHHHHhh
Q 012014 377 A-LP-Q-------RAEEVVDD-------FNLQE---------IEEGRTM-CMEVSSS-SGSSAHASIILECFNSICEIGV 429 (473)
Q Consensus 377 ~-~~-~-------~~~~~~~~-------~~~~~---------~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~ 429 (473)
. .| . ......+. ..... ....... ....... ...+............+.+++.
T Consensus 404 lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk 483 (586)
T KOG0667|consen 404 LGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLK 483 (586)
T ss_pred hCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHH
Confidence 1 11 0 00000110 00000 0000000 0000011 1122222333345678899999
Q ss_pred hcccCCCCCCCChHHHHH
Q 012014 430 ACSAERPRERMKINDVES 447 (473)
Q Consensus 430 ~cl~~dP~~RPt~~ev~~ 447 (473)
+||.+||.+|+|..|.++
T Consensus 484 ~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 484 RCLEWDPAERITPAQALN 501 (586)
T ss_pred HHhccCchhcCCHHHHhc
Confidence 999999999999988764
No 138
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.1e-41 Score=330.96 Aligned_cols=278 Identities=18% Similarity=0.146 Sum_probs=199.4
Q ss_pred cCCCCccceeecCCCeEEEEEEec---CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..+|.+.+.||+|+||.||++... .+..||+|.+.. .....+|+.++++++||||+++++++.. ...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~-----~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG-----GKTPGREIDILKTISHRAIINLIHAYRW-----KST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc-----cccHHHHHHHHHhcCCCCccceeeeEee-----CCE
Confidence 357999999999999999999742 357899998753 2345789999999999999999998754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++||++ +++|.+++.... .+++.+++.++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 161 ~~lv~e~~-~~~l~~~l~~~~---------~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~ 227 (392)
T PHA03207 161 VCMVMPKY-KCDLFTYVDRSG---------PLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLG 227 (392)
T ss_pred EEEEehhc-CCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEc
Confidence 79999999 478999885433 3668999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc--ccHHHHHHhhc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK--MNLRNFVKMAL 378 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~--~~~~~~~~~~~ 378 (473)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++|..||.+..... ..+....+...
T Consensus 228 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 228 DFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred cCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 9999986654433333345679999999999999899999999999999999999999997653321 12222222211
Q ss_pred Ccchh--hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 PQRAE--EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
..... .-........+.... .........+.. -........+.+++.+||..||++|||+.|++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYA--IVLRPPYTIPPV--IRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cCccccCCccchhHHHHHHhhc--ccccCCccccch--hhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11000 000000000100000 000000000000 0001234577889999999999999999999764
No 139
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-41 Score=327.53 Aligned_cols=241 Identities=21% Similarity=0.235 Sum_probs=188.7
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCcee
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 220 (473)
+|.+.+.||+|+||.||+|.. .+++.||+|+++... ......+..|..++..+ +|++|+++++++.+. ..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM-----DR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----CE
Confidence 578899999999999999984 467899999987432 22234566788888777 589999999887543 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++.++..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~ 143 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG---------RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIA 143 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEc
Confidence 899999999999999987654 3558889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+..... ........
T Consensus 144 DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-----~~~~i~~~ 216 (323)
T cd05616 144 DFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----LFQSIMEH 216 (323)
T ss_pred cCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-----HHHHHHhC
Confidence 999997543211 12234568999999999999999999999999999999999999997532211 11100000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
.. ..+...+.++.+|+.+||+.||.+|++.
T Consensus 217 ~~--------------------------------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 217 NV--------------------------------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CC--------------------------------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 00 0011234567899999999999999985
No 140
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.5e-41 Score=316.66 Aligned_cols=265 Identities=23% Similarity=0.341 Sum_probs=201.0
Q ss_pred CCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 146 GFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
+|.+.+.||+|+||.||+|... ....+++|.+..... .....+.+|+.++..++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 4778899999999999999842 235688888764332 2235688999999999999999999987543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCC---------------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeecc
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNW---------------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCN 283 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~D 283 (473)
...+++|||+.+|+|.+++........ ......+++..++.++.|++.||.||| +++++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhh
Confidence 357999999999999999875422110 011124678899999999999999999 99999999
Q ss_pred CCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCC
Q 012014 284 LKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDG 362 (473)
Q Consensus 284 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 362 (473)
|||+||++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||.+
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999976543322222223345778999999988889999999999999999998 9999975
Q ss_pred CCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 363 IFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
..... +......... ...+..++..+.+++.+||+.||++|||+
T Consensus 233 ~~~~~--~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 233 IAPER--LFNLLKTGYR----------------------------------MERPENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred CCHHH--HHHHHhCCCC----------------------------------CCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 32111 1111100000 00011245678899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 012014 443 NDVESRLRLIRR 454 (473)
Q Consensus 443 ~ev~~~L~~l~~ 454 (473)
.|+++.|+.+-.
T Consensus 277 ~~i~~~l~~~~~ 288 (290)
T cd05045 277 ADISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHHh
Confidence 999999998854
No 141
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.2e-41 Score=331.86 Aligned_cols=284 Identities=17% Similarity=0.189 Sum_probs=199.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|+||.||++. ..+++.||+|++.... ....+.+.+|+.++..++||||+++++++...+.......+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 47889999999999999998 4578999999986422 12345688999999999999999999998654433334679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+. ++|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~---------~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Df 147 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ---------PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDF 147 (372)
T ss_pred EEeeccc-cCHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccc
Confidence 9999995 68888886543 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|+++...... ........+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+..... .+..+........
T Consensus 148 g~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~ 225 (372)
T cd07853 148 GLARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPS 225 (372)
T ss_pred cceeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCC
Confidence 9998654322 1122234578999999998774 47899999999999999999999997643221 1111111111111
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...+... . ......... ..................+..+.+|+.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~~~-~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 226 LEAMRSA-C-EGARAHILR--GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHh-h-HHHHHHHHh--CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 1111000 0 000000000 0000000000000111235678899999999999999999999763
No 142
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.4e-41 Score=313.60 Aligned_cols=260 Identities=20% Similarity=0.292 Sum_probs=203.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|. ..+++.+|||.+..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC-----Ce
Confidence 468889999999999999999 46889999998864322 2235688999999999999999999998543 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+++++|.+++...... ...+++..+..++.||+.||.||| +++++|+||||+||+++.++.++|+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~ 148 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ-----KRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLG 148 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEC
Confidence 79999999999999998643211 113568899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.+..... ........
T Consensus 149 dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~-- 221 (267)
T cd08229 149 DLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---YSLCKKIE-- 221 (267)
T ss_pred cchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH---HHHhhhhh--
Confidence 9999876543221 1223458899999999988889999999999999999999999996532211 11110000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..... +......+..+.+++.+||+.||.+|||+.+|++.++++
T Consensus 222 ---~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 222 ---QCDYP-------------------------PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---cCCCC-------------------------CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 00000 000112566888999999999999999999999999876
No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.7e-41 Score=317.48 Aligned_cols=267 Identities=21% Similarity=0.295 Sum_probs=200.6
Q ss_pred cccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
...++|++.++||+|+||.||+|... .+..||+|.++.... .....+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG- 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-
Confidence 45678999999999999999999632 245799998763321 2234578899999999999999999987543
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCC-CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
...++||||+++|+|.+++......... .....+++..+..++.|++.||.||| +++|+||||||+||+++.
T Consensus 82 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~ 154 (288)
T cd05061 82 ----QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAH 154 (288)
T ss_pred ----CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcC
Confidence 3579999999999999999754321110 00112446788899999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHH
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~ 372 (473)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... .
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~ 229 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----Q 229 (288)
T ss_pred CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----H
Confidence 99999999999986543222221222235678999999998889999999999999999998 78898653221 1
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
........... ..+..++..+.+++.+||+.||++|||+.++++.|+..
T Consensus 230 ~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 230 VLKFVMDGGYL-------------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11110000000 00112356889999999999999999999999888876
No 144
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.4e-41 Score=331.34 Aligned_cols=287 Identities=16% Similarity=0.153 Sum_probs=199.6
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
..++|.+.+.||+|+||.||++. ...++.||+|++..... .....+.+|+.+++.++||||+++++++..... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 45789999999999999999998 45689999999874322 233567789999999999999999998864331 223
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||++ ++|.+++... ++...+..++.|++.||.||| ++||+||||||+|||++.++.+|
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~~-----------l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~k 159 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQME-----------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 159 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhhc-----------CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEE
Confidence 45799999995 5777776532 447788899999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+ .+...+....
T Consensus 160 l~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 235 (355)
T cd07874 160 ILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLG 235 (355)
T ss_pred EeeCcccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 9999999865332 12233468999999999999899999999999999999999999997642211 1111111111
Q ss_pred Cc--chhhhccccchHHHHhhhhhh----cccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 PQ--RAEEVVDDFNLQEIEEGRTMC----MEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.. .....+............... ......................+.+|+.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 000000000000000000000 00000000000001111235678899999999999999999999874
No 145
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-41 Score=319.00 Aligned_cols=262 Identities=25% Similarity=0.341 Sum_probs=198.9
Q ss_pred ccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
.+++|.+.+.||+|+||.||+|... .+..||+|.+...... ....+.+|+.+++.++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER-- 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--
Confidence 3467899999999999999999853 3567899987643322 234688999999999999999999987543
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
...++||||+++++|.+++......... ...+++.+++.++.||+.||.||| +++++||||||+||+++.++
T Consensus 82 ---~~~~lv~e~~~g~~L~~~i~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 82 ---LPRFILLELMAGGDLKSFLRENRPRPER--PSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHHhCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccC
Confidence 3568999999999999999776432211 124678999999999999999999 89999999999999998654
Q ss_pred ---cEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHH
Q 012014 296 ---IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLR 371 (473)
Q Consensus 296 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~ 371 (473)
.+||+|||+++...............++..|+|||++.+..++.++|||||||++|+|++ |..||.+..... +.
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~ 231 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VM 231 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HH
Confidence 689999999986632221111112223567999999998889999999999999999997 999997532211 11
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
..+.. ... ...+..++..+.+++.+||+.||++|||+.+|++.|+
T Consensus 232 ~~~~~---~~~-------------------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFVTG---GGR-------------------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHc---CCc-------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11000 000 0001124567889999999999999999999999885
No 146
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.5e-41 Score=320.81 Aligned_cols=280 Identities=17% Similarity=0.250 Sum_probs=200.1
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|.+.+.||+|+||.||+|. ..+++.||+|.++.... .....+.+|+.++++++||||+++++++... ...+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD-----KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-----CeEE
Confidence 579999999999999999998 44688999999875432 2334678999999999999999999997543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||++ ++|.+++..... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Df 148 (309)
T cd07872 81 LVFEYLD-KDLKQYMDDCGN--------IMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADF 148 (309)
T ss_pred EEEeCCC-CCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcc
Confidence 9999996 589888865432 2457888899999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC--
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP-- 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~-- 379 (473)
|+++...... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+ .+....+....
T Consensus 149 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~ 225 (309)
T cd07872 149 GLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPT 225 (309)
T ss_pred ccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 9997543322 11223457899999998865 458899999999999999999999997643221 11111111111
Q ss_pred -cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH--HHHHHH
Q 012014 380 -QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES--RLRLIR 453 (473)
Q Consensus 380 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~l~ 453 (473)
.....+.......... .. ..............+..+.+|+.+||+.||.+|||+.|+++ .++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 226 EETWPGISSNDEFKNYN-------FP--KYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred HHHHhhhcchhhhhhhh-------cC--ccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0011110000000000 00 00000001111234567889999999999999999999987 444443
No 147
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.1e-41 Score=331.61 Aligned_cols=279 Identities=15% Similarity=0.124 Sum_probs=197.6
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
...+|.+.+.||+|+||.||+|.. ..++.||||... ...+.+|++++++++|||||++++++... ...
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVG-----GLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEE
Confidence 345799999999999999999994 457899999632 34567899999999999999999987543 367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++|||++ .++|.+++..... .+++.+++.++.||+.||.||| ++||+||||||+|||++.++.+||+|
T Consensus 236 ~lv~e~~-~~~L~~~l~~~~~--------~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~D 303 (461)
T PHA03211 236 CLVLPKY-RSDLYTYLGARLR--------PLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGD 303 (461)
T ss_pred EEEEEcc-CCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcc
Confidence 9999999 5799998865432 3668999999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc------ccHHHHHH
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK------MNLRNFVK 375 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~------~~~~~~~~ 375 (473)
||+++...............||+.|+|||++.+..++.++|||||||++|||++|..|+....... ..+...+.
T Consensus 304 FGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~ 383 (461)
T PHA03211 304 FGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIR 383 (461)
T ss_pred cCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHH
Confidence 999986643322222234569999999999999899999999999999999999887654322111 11222221
Q ss_pred hhcC--cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 376 MALP--QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 376 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... ..........+...+... ..... ........+.........+.+|+.+||+.||.+|||+.|+++
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 384 QAQVHVDEFPQHAGSRLVSQYRHR--AARNR-RPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred hhccccccCCCCcchHHHHHHHhh--hhccc-CCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 1100 000000000111111000 00000 000000111112233457889999999999999999999976
No 148
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.3e-41 Score=320.55 Aligned_cols=205 Identities=20% Similarity=0.251 Sum_probs=163.3
Q ss_pred cceeecCCCeEEEEEEec---CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 150 ANLIGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
..+||+|+||.||+|+.. +++.||+|.+... .....+.+|+.++++++||||+++++++... .....+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence 468999999999999843 4678999998643 2345678999999999999999999988542 2346799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe----cCCccEEEeec
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL----DDEMIGHVGDF 302 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~----~~~~~~kl~Df 302 (473)
|+ +++|.+++..............+++..+..++.||+.||.||| +++|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 99 4689888764432211111224678899999999999999999 9999999999999999 45678999999
Q ss_pred ccccccCcccc-ccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 303 GMARFLPAIDK-QNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 303 g~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|+++....... ........||+.|+|||++.+. .++.++||||+||++|+|++|.+||.+.
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99987643221 1222345689999999998774 5899999999999999999999999754
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.4e-41 Score=346.88 Aligned_cols=268 Identities=24% Similarity=0.276 Sum_probs=202.7
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.++||+|+||.||+|.. .+++.||+|++...... ..+.+.+|++++.+++||||+++++++.+. ..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-----~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-----DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----CE
Confidence 5799999999999999999984 46899999998643221 235688999999999999999999997543 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCC--CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTN--WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
.+++|||++||+|.+++....... .......+++..++.++.||+.||.||| ++||+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEE
Confidence 799999999999999986532111 0111123456788999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccc----------------cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 299 VGDFGMARFLPAIDKQ----------------NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999865211100 011124599999999999999999999999999999999999999975
Q ss_pred CCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-C
Q 012014 363 IFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-K 441 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t 441 (473)
......... .... ..... ....+.+..+.+++.+||..||++|| +
T Consensus 234 ~~~~ki~~~----~~i~-~P~~~-----------------------------~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 234 KKGRKISYR----DVIL-SPIEV-----------------------------APYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred cchhhhhhh----hhcc-Chhhc-----------------------------cccccCCHHHHHHHHHHccCChhhCcCH
Confidence 322111000 0000 00000 00113456788999999999999996 6
Q ss_pred hHHHHHHHHHHHH
Q 012014 442 INDVESRLRLIRR 454 (473)
Q Consensus 442 ~~ev~~~L~~l~~ 454 (473)
++++.+.|+....
T Consensus 280 ~eeLl~~Le~~lq 292 (932)
T PRK13184 280 VQELKQDLEPHLQ 292 (932)
T ss_pred HHHHHHHHHHHHh
Confidence 7888888887754
No 150
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-42 Score=330.32 Aligned_cols=238 Identities=24% Similarity=0.287 Sum_probs=188.6
Q ss_pred ceeecCCCeEEEEEEe----cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 151 NLIGAGNFGSVYNGTL----FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|++++.+++||||+++++++.+ ....++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEEE
Confidence 5799999999999873 3578999999974322 233457789999999999999999999854 3467999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||+
T Consensus 77 ~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 144 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV---------MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGL 144 (318)
T ss_pred EcCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccC
Confidence 99999999999996543 3568899999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ...........
T Consensus 145 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i~~~~~-- 215 (318)
T cd05582 145 SKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMILKAKL-- 215 (318)
T ss_pred CcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHHHcCCC--
Confidence 87653321 2233456899999999999888999999999999999999999999753211 11110000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
..+...+..+.+|+.+||+.||++|||+.+
T Consensus 216 ------------------------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 ------------------------------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 001123456789999999999999999655
No 151
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-41 Score=323.95 Aligned_cols=240 Identities=24% Similarity=0.335 Sum_probs=186.6
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHh-cCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAIN-IKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|.. .+++.||+|+++... ......+..|..++.. ++||||+++++++.+. ...++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK-----ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC-----CEEEEEE
Confidence 4699999999999994 467899999997532 2234456678888776 4899999999998543 3689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++.++..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 76 ey~~~g~L~~~l~~~~---------~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 143 (316)
T cd05619 76 EYLNGGDLMFHIQSCH---------KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMC 143 (316)
T ss_pred eCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcc
Confidence 9999999999997643 3557888999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... +...+....+.
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~i~~~~~~----- 214 (316)
T cd05619 144 KENMLG--DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LFQSIRMDNPC----- 214 (316)
T ss_pred eECCCC--CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCC-----
Confidence 753221 122234568999999999999899999999999999999999999997532110 00000000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH-HHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN-DVE 446 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~ 446 (473)
.+......+.+++.+||+.||++||++. ++.
T Consensus 215 ------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 ------------------------------YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ------------------------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0011344678899999999999999997 554
No 152
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-40 Score=319.44 Aligned_cols=272 Identities=23% Similarity=0.332 Sum_probs=205.3
Q ss_pred ccCCCCccceeecCCCeEEEEEEec--------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeec
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSG 212 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 212 (473)
...+|.+.++||+|+||.||+|... ....+|+|.++.... .....+.+|+.++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 4467889999999999999999731 245789998874322 2234678999999999 69999999998854
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCC-------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW-------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLK 285 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlk 285 (473)
. ...+++|||+++|+|.+++........ ......+++.++..++.|++.||.||| ++|++|||||
T Consensus 90 ~-----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlk 161 (314)
T cd05099 90 E-----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLA 161 (314)
T ss_pred C-----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecccc
Confidence 2 357999999999999999976432110 001124678899999999999999999 9999999999
Q ss_pred CCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCC
Q 012014 286 PSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIF 364 (473)
Q Consensus 286 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~ 364 (473)
|+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|+|++ |..||.+..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred ceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999986643222221222234567999999988889999999999999999999 889986532
Q ss_pred CCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 365 TGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
.. ........... ...+..++.++.+|+.+||+.||++|||+.|
T Consensus 242 ~~-----~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 242 VE-----ELFKLLREGHR-------------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred HH-----HHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 11 11110000000 0001234567889999999999999999999
Q ss_pred HHHHHHHHHHhhcc
Q 012014 445 VESRLRLIRRKLLE 458 (473)
Q Consensus 445 v~~~L~~l~~~~~~ 458 (473)
+++.|+.+......
T Consensus 286 ll~~l~~~~~~~~~ 299 (314)
T cd05099 286 LVEALDKVLAAVSE 299 (314)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999765543
No 153
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.9e-41 Score=310.99 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=198.3
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
-++|.+.+.||+|+||.||++.. .+..+|+|.++.. ...+.+.+|+.++++++|+|++++++++.. .....++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~l 77 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYI 77 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEE
Confidence 35788899999999999999975 5788999998632 235678999999999999999999997643 2345799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++++|.+++...... .+++..++.++.|++.||.||| +++++||||||+||++++++.+||+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg 147 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRS-------VLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFG 147 (256)
T ss_pred EEECCCCCcHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCc
Confidence 99999999999999765422 2558889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.... .............
T Consensus 148 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~ 217 (256)
T cd05082 148 LTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYK 217 (256)
T ss_pred cceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhcCCC
Confidence 987543221 12234668999999988889999999999999999998 999986421 1111111000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
. .....++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 218 ~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 M-------------------------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred C-------------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0 00112456788999999999999999999999998753
No 154
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.6e-41 Score=325.62 Aligned_cols=241 Identities=22% Similarity=0.250 Sum_probs=189.8
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|.. .+++.||+|+++... ......+.+|..++..+ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 4699999999999984 468899999997432 23345677888998888 69999999999754 33689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++.++..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 e~~~~~~L~~~~~~~~---------~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 143 (318)
T cd05570 76 EYVNGGDLMFHIQRSG---------RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMC 143 (318)
T ss_pred cCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCC
Confidence 9999999999987654 3668899999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ...........
T Consensus 144 ~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~~i~~~~~--- 213 (318)
T cd05570 144 KEGILG--GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSILEDEV--- 213 (318)
T ss_pred eecCcC--CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHHHHHcCCC---
Confidence 753221 11223346899999999999999999999999999999999999999753211 11110000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh-----HHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI-----NDVES 447 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~ 447 (473)
..+...+..+.+|+.+||..||++|||+ .++++
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 -----------------------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -----------------------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0011234578899999999999999999 77754
No 155
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-40 Score=310.71 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=202.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..++|++.++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++||||+++++++.. ...+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIY 76 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcE
Confidence 346789999999999999999998788999999987433 235678999999999999999999988632 2479
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+||
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~df 146 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGI-------KLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADF 146 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccC
Confidence 999999999999998754322 3568889999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++........ .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+..... ...........
T Consensus 147 g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~- 222 (260)
T cd05067 147 GLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLERGYRM- 222 (260)
T ss_pred cceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHcCCCC-
Confidence 99976642221 11122335678999999988889999999999999999999 999997543211 00000000000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
+.....+.++.+++.+||+.||++|||++++++.|+.
T Consensus 223 ---------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 ---------------------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---------------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0011234578999999999999999999999999874
No 156
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-41 Score=320.28 Aligned_cols=262 Identities=25% Similarity=0.388 Sum_probs=200.5
Q ss_pred CCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|...++||+|+||.||++... ++..+|+|.+..........+.+|++++..++|+||+++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG----- 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC-----
Confidence 56788899999999999999632 3568899988755544556799999999999999999999987543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCC------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNW------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
...+++|||+++|+|.+++........ ......+++..++.++.|++.||.||| +++++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEc
Confidence 357999999999999999976542100 001123678899999999999999999 99999999999999999
Q ss_pred CCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHH
Q 012014 293 DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLR 371 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~ 371 (473)
+++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |.+||........ +.
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~ 235 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IE 235 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HH
Confidence 999999999999975533221111122235678999999998899999999999999999998 9999864322110 00
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
... .... ...+..++..+.+|+.+||+.||.+||+++||++.|+
T Consensus 236 ~~~----~~~~-------------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 CIT----QGRE-------------------------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHH----cCcc-------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 000 0000 0001124567889999999999999999999999886
No 157
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.5e-41 Score=323.72 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=186.9
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|.. .+++.||+|+++... ......+..|..++..+ +||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 4699999999999994 468999999997432 23345567788887754 89999999999854 34789999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++.++..++.|++.||+||| ++||+||||||+|||++.++.+||+|||++
T Consensus 76 E~~~~g~L~~~i~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~ 143 (316)
T cd05620 76 EFLNGGDLMFHIQDKG---------RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMC 143 (316)
T ss_pred CCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCC
Confidence 9999999999987653 3558888999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... +...+....+
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~~~~~~~~~~------ 213 (316)
T cd05620 144 KENVFG--DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--LFESIRVDTP------ 213 (316)
T ss_pred eecccC--CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC------
Confidence 743221 122334569999999999999899999999999999999999999997532110 0000000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH-HHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN-DVE 446 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~ 446 (473)
..+.....++.+|+.+||+.||++||++. ++.
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 -----------------------------HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00011345678899999999999999984 554
No 158
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=330.68 Aligned_cols=246 Identities=24% Similarity=0.336 Sum_probs=200.3
Q ss_pred eeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCC
Q 012014 152 LIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN 230 (473)
Q Consensus 152 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 230 (473)
+||+|.||+||-|+ ..+...+|||-+..........+..|+...++|+|.|||+++|.+.+ +.+.-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-----nGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-----NGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-----CCeEEEEeecCCC
Confidence 69999999999999 55677899999876666667778999999999999999999999743 3477899999999
Q ss_pred CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec-CCccEEEeecccccccC
Q 012014 231 GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLP 309 (473)
Q Consensus 231 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~-~~~~~kl~Dfg~~~~~~ 309 (473)
|+|.++|+..- .+.. =.+.+.-.+.+||++||.||| .+.|||||||-+|||++ -.|.+||+|||.++.+.
T Consensus 657 GSLSsLLrskW----GPlK--DNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 657 GSLSSLLRSKW----GPLK--DNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred CcHHHHHHhcc----CCCc--cchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 99999998653 2221 136777789999999999999 99999999999999996 47899999999998775
Q ss_pred ccccccceeeccCCCCcCCCccccCCC--CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhcc
Q 012014 310 AIDKQNRFICIKGSTGYIPPEYDLGCE--ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVD 387 (473)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (473)
... ....++.||..|||||++..++ |+.++|||||||++.||.||++||.........+-.. -
T Consensus 728 gin--P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV---G---------- 792 (1226)
T KOG4279|consen 728 GIN--PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV---G---------- 792 (1226)
T ss_pred cCC--ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh---c----------
Confidence 433 2334566999999999998764 8999999999999999999999997653332111100 0
Q ss_pred ccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 388 DFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. -..+++.+.+...+...++.+|+.+||.+||+++++++
T Consensus 793 --m-------------------yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 793 --M-------------------YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred --c-------------------eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 0 01244566778889999999999999999999999975
No 159
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.2e-41 Score=317.86 Aligned_cols=250 Identities=19% Similarity=0.242 Sum_probs=200.0
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|++.+.||+|+||.||+|. ..+++.||+|.+..........+.+|+.+++.++||||+++++.|... ...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-----~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEEE
Confidence 4578999999999999999998 457899999999865555567889999999999999999999988642 3689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++.... +++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 94 lv~e~~~~~~L~~~~~~~~----------~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 94 VVMEYLAGGSLTDVVTETC----------MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred EeecccCCCCHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECcc
Confidence 9999999999999986532 457888999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++....... .......|++.|+|||.+.+..++.++|||||||++|+|++|..||....... ...... ....
T Consensus 161 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~~~-~~~~ 233 (296)
T cd06654 161 GFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLIA-TNGT 233 (296)
T ss_pred ccchhccccc--cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHHHh-cCCC
Confidence 9987653322 11223458899999999988889999999999999999999999997532211 100000 0000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+ ..+...+..+.+++.+||..||++|||+.||+.
T Consensus 234 ~~~-----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 234 PEL-----------------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCC-----------------------------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 001124557889999999999999999999986
No 160
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.5e-41 Score=318.70 Aligned_cols=270 Identities=22% Similarity=0.269 Sum_probs=197.6
Q ss_pred cCCCCccceeecCCCeEEEEEEecC---------------CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD---------------GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVF 207 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 207 (473)
.++|++.+.||+|+||.||++.... ...||+|.++.... .....+.+|++++.+++||||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3579999999999999999987422 23589999864322 2235688999999999999999999
Q ss_pred eeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCC---CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN---WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 208 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
+++... ...++||||+++++|.+++....... .......+++..++.++.|++.||.||| +++++||||
T Consensus 84 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dl 155 (295)
T cd05097 84 GVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDL 155 (295)
T ss_pred EEEcCC-----CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeecccc
Confidence 998543 36799999999999999996543110 0001113568889999999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh--CCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT--GIRPSDG 362 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~P~~~ 362 (473)
||+||++++++.+||+|||++................++..|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999999999976543221111222335678999999988889999999999999999998 6677765
Q ss_pred CCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 363 IFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
....+ .+........... ... ........+..+.+|+.+||..||++|||+
T Consensus 236 ~~~~~-~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~ 286 (295)
T cd05097 236 LSDEQ-VIENTGEFFRNQG-RQI---------------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTF 286 (295)
T ss_pred cChHH-HHHHHHHhhhhcc-ccc---------------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 32211 1111000000000 000 000011245689999999999999999999
Q ss_pred HHHHHHHH
Q 012014 443 NDVESRLR 450 (473)
Q Consensus 443 ~ev~~~L~ 450 (473)
.+|++.|+
T Consensus 287 ~~i~~~l~ 294 (295)
T cd05097 287 NKIHHFLR 294 (295)
T ss_pred HHHHHHHh
Confidence 99999886
No 161
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.4e-41 Score=315.36 Aligned_cols=264 Identities=23% Similarity=0.330 Sum_probs=201.1
Q ss_pred ccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
..++|.+.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++..++||||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 81 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG-- 81 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--
Confidence 3467889999999999999999843 236899999864321 2234688999999999999999999997543
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCC-CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
...++||||+++|+|.+++......... .....+++..+..++.|++.||.||| +++++||||||+||+++.+
T Consensus 82 ---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~ 155 (277)
T cd05032 82 ---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAED 155 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCC
Confidence 4679999999999999999764321110 00113567889999999999999999 9999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~ 373 (473)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++||+++ |..||.+..... ....
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~ 233 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLKF 233 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHHH
Confidence 9999999999976543322222233346788999999988889999999999999999998 999986532111 1111
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.. ..... ..+..++..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 234 ~~---~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 234 VI---DGGHL-------------------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred Hh---cCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 10 00000 001123568889999999999999999999999886
No 162
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.3e-41 Score=319.68 Aligned_cols=267 Identities=22% Similarity=0.343 Sum_probs=201.4
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCC--EEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGT--TIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 219 (473)
++|++.++||+|+||.||+|... ++. .+++|.++... ....+.+.+|+.++.++ +||||+++++++... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR-----G 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----C
Confidence 57899999999999999999853 333 47888876322 22345688999999999 799999999987543 3
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCC-------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWR-------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
..+++|||+++|+|.+++......... .....+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEEC
Confidence 679999999999999999764321110 01124678899999999999999999 99999999999999999
Q ss_pred CCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHH
Q 012014 293 DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLR 371 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~ 371 (473)
.++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.+.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---- 226 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---- 226 (297)
T ss_pred CCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----
Confidence 99999999999986432111 1111123557999999988889999999999999999997 999997532211
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
........ . ....+..++..+.+|+.+||+.||.+|||+.+|++.|+.
T Consensus 227 -~~~~~~~~-~------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 274 (297)
T cd05089 227 -LYEKLPQG-Y------------------------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSR 274 (297)
T ss_pred -HHHHHhcC-C------------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11100000 0 000011245678899999999999999999999999999
Q ss_pred HHHhhcc
Q 012014 452 IRRKLLE 458 (473)
Q Consensus 452 l~~~~~~ 458 (473)
+..+...
T Consensus 275 ~~~~~~~ 281 (297)
T cd05089 275 MLEARKA 281 (297)
T ss_pred HHHhhcc
Confidence 9876543
No 163
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-40 Score=309.98 Aligned_cols=246 Identities=24% Similarity=0.343 Sum_probs=192.3
Q ss_pred eeecCCCeEEEEEEe---cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 152 LIGAGNFGSVYNGTL---FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
.||+|+||.||+|.+ .++..+|+|+++.... ...+.+.+|+.++..++||||+++++++.. ...++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 589999999999963 3578899999864332 234568899999999999999999998632 24589999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 76 ~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~ 143 (257)
T cd05116 76 LAELGPLNKFLQKNK---------HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSK 143 (257)
T ss_pred cCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCcccc
Confidence 999999999997543 3568889999999999999999 9999999999999999999999999999998
Q ss_pred ccCcccccc-ceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 307 FLPAIDKQN-RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 307 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
......... ......++..|+|||.+....++.++||||||+++|||++ |..||....... +...+.. ...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~i~~---~~~-- 216 (257)
T cd05116 144 ALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--VTQMIES---GER-- 216 (257)
T ss_pred ccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHC---CCC--
Confidence 664332111 1122234678999999988889999999999999999998 999997532211 1111110 000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
.+.+..++.++.+|+.+||+.||++|||+++|.+.|+.
T Consensus 217 -----------------------------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 -----------------------------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -----------------------------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 00111245678899999999999999999999999875
No 164
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.3e-40 Score=310.78 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=197.7
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC-----CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG-----GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
++|.+.+.||+|++|.||+|. ..+++.+|+|.+...... ....+.+|+.++.+++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 579999999999999999998 456899999998643221 234678899999999999999999998543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++++||+++++|.+++.... .++...+..++.|++.||.||| +.+++||||+|+||+++.++.++
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~ 144 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG---------ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVK 144 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEE
Confidence 37899999999999999987653 2557888999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccc-eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNR-FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++.......... .....|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 145 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~ 220 (263)
T cd06625 145 LGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIA 220 (263)
T ss_pred EeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHh
Confidence 999999976543221111 12345788999999999988999999999999999999999999653111 1110000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... ....+...+..+.+++.+||+.||.+|||+.|+++
T Consensus 221 ~~~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 221 TQPT-------------------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred ccCC-------------------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 0000 00111234557889999999999999999999976
No 165
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.1e-41 Score=315.37 Aligned_cols=247 Identities=23% Similarity=0.265 Sum_probs=189.3
Q ss_pred eecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||+|+||+||++. ..+++.||+|.+..... ...+.+..|+.+++.++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-----KTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-----CCeEEEEEeCC
Confidence 6999999999998 45789999999864322 123457789999999999999999988754 34689999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++|+|.+++...... ...+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||++..+
T Consensus 76 ~~g~L~~~~~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 147 (280)
T cd05608 76 NGGDLRYHIYNVDEE-----NPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVEL 147 (280)
T ss_pred CCCCHHHHHHhcccc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceec
Confidence 999999887543211 114668899999999999999999 999999999999999999999999999999765
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||........ .............
T Consensus 148 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~------ 218 (280)
T cd05608 148 KDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRILNDSV------ 218 (280)
T ss_pred CCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhhcccCC------
Confidence 43221 22334689999999999999999999999999999999999999975322110 0000000000000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
..+...+..+.+++.+||+.||++|| |++++++
T Consensus 219 --------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 --------------------------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred --------------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 01123456788999999999999999 5566654
No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-41 Score=315.16 Aligned_cols=253 Identities=20% Similarity=0.255 Sum_probs=196.7
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|.+.+.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+... ...+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-----DKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEE
Confidence 3578889999999999999998 456899999998765444455688999999999999999999987543 4679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++.... .+++.++..++.|++.||.||| ++|++|+||||+||+++.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTG---------PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred EEEeccCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcc
Confidence 9999999999999987554 3568899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|++....... .......|+..|+|||++. ...++.++|||||||++|+|++|..||......... ........
T Consensus 151 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~~~~~- 226 (267)
T cd06645 151 GVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMTKSNF- 226 (267)
T ss_pred eeeeEccCcc--cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-HhhhccCC-
Confidence 9987653321 1223346899999999874 456889999999999999999999998643221110 00000000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... . .....+..+.+++.+||+.||++|||+++|++
T Consensus 227 -~~~~~-~----------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 227 -QPPKL-K----------------------------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -CCCcc-c----------------------------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000 0 00113446789999999999999999999875
No 167
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-40 Score=309.79 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=196.8
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
.+|++.+.||+|+||.||+|.+.++..+|+|.+.... .....+.+|+.+++.++||||+++++++... ...++|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-----RPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-----CceEEE
Confidence 4588899999999999999997777789999986322 2345688999999999999999999987543 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++++|.+++..... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~ 146 (256)
T cd05059 78 TEYMANGCLLNYLRERKG--------KLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGL 146 (256)
T ss_pred EecCCCCCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCccc
Confidence 999999999999975432 3568889999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+. .........
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~~~---- 219 (256)
T cd05059 147 ARYVLDDQY-TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV--VESVSAGYR---- 219 (256)
T ss_pred ceecccccc-cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH--HHHHHcCCc----
Confidence 876533211 11111123457999999998889999999999999999999 8999975322110 000000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
...+..++..+.+++.+||+.+|++|||+.||++.|
T Consensus 220 ------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 ------------------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ------------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000112456788999999999999999999999876
No 168
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.3e-41 Score=329.47 Aligned_cols=205 Identities=26% Similarity=0.321 Sum_probs=171.6
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
++....++|++.+.||+|+||.||++. ..+++.+|+|++.... ......+.+|+.++..++||||+++++++.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-- 114 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-- 114 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--
Confidence 344456899999999999999999999 4568899999986422 2233457789999999999999999999754
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
....++||||+++|+|.+++.... ++...+..++.||+.||.||| +++|+||||||+|||++.+
T Consensus 115 ---~~~~~lv~Ey~~gg~L~~~~~~~~----------~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~ 178 (371)
T cd05622 115 ---DRYLYMVMEYMPGGDLVNLMSNYD----------VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKS 178 (371)
T ss_pred ---CCEEEEEEcCCCCCcHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCC
Confidence 347899999999999999997542 457788889999999999999 9999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCC----CCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE----ASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+.+||+|||+++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|..||.+
T Consensus 179 ~~ikL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 179 GHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CCEEEEeCCceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999999998664322 11223456999999999987543 78999999999999999999999975
No 169
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.5e-41 Score=329.52 Aligned_cols=286 Identities=16% Similarity=0.147 Sum_probs=199.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
..++|.+.+.||+|+||.||+|. ...++.||||++.... ......+.+|+.+++.++||||+++++++..... ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 45789999999999999999998 4568899999987432 2234567899999999999999999998754321 223
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||++ ++|.+++... +++..+..++.|++.||.||| +++|+||||||+|||++.++.+|
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~-----------~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~k 166 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQME-----------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHhc-----------CCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEE
Confidence 45799999995 5787777532 447788899999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+ .+........
T Consensus 167 L~DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~ 242 (364)
T cd07875 167 ILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLG 242 (364)
T ss_pred EEeCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999999865332 12233468999999999999999999999999999999999999997643221 1122211111
Q ss_pred Cc--chhhhccccchHHHHhhhhhhcc----cccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQ--RAEEVVDDFNLQEIEEGRTMCME----VSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. .....+................. ....................+.+|+.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred CCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 10 00011111000000000000000 00000000000111123457889999999999999999999976
No 170
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.3e-41 Score=314.09 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=199.3
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCC-c
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQG-A 218 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 218 (473)
.+++.|++.+.||+|+||.||+|. ..+++.||+|.+.... .....+.+|+.++.++ +||||++++++|....... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 456789999999999999999998 4568899999987433 3446788999999998 7999999999987543221 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+++|||+++++|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGN-------TLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEE
Confidence 4679999999999999999764321 3568889999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
|+|||++....... .......|+..|+|||++. +..++.++|||||||++|||++|..||....... ..
T Consensus 152 l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~ 225 (272)
T cd06637 152 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----AL 225 (272)
T ss_pred EccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HH
Confidence 99999997653322 1223456899999999986 3357889999999999999999999996432111 00
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
... ........ .....+..+.+|+.+||..||.+|||+.||++
T Consensus 226 ~~~-~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 226 FLI-PRNPAPRL------------------------------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHH-hcCCCCCC------------------------------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000 00000000 00123457889999999999999999999875
No 171
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.4e-40 Score=314.16 Aligned_cols=273 Identities=23% Similarity=0.346 Sum_probs=201.3
Q ss_pred CCCCccceeecCCCeEEEEEEe-----cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-----FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..|++.+.||+|+||.||++.. .++..||+|.++... ......+.+|+.+++.++||||+++++++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 3578899999999999999973 357889999986432 22345788999999999999999999988543 23
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++++|.+++..... .+++.++..++.|++.||.||| ++|++||||||+||+++.++.+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~--------~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~ 149 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKN--------KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 149 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEE
Confidence 457999999999999999865431 2568889999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccc-cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++.+...... .......|+..|+|||++.+..++.++||||||+++|+|+++..|+...... .....
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~------~~~~~ 223 (284)
T cd05079 150 IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL------FLKMI 223 (284)
T ss_pred ECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch------hhhhc
Confidence 9999999866432211 1112344677899999998888999999999999999999988775432110 00000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.+........ ........+. ..+....++..+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus 224 ~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 224 GPTHGQMTVT-RLVRVLEEGK--------------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccccHH-HHHHHHHcCc--------------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000000 0000000000 0001123567899999999999999999999999999875
No 172
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-41 Score=327.38 Aligned_cols=237 Identities=24% Similarity=0.262 Sum_probs=183.7
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHH-HHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECK-AAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|.. .+|+.||+|++.... ......+.+|.. +++.++||||+++++.+.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 4699999999999994 578999999987432 122234455554 4678999999999998754 34679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||++
T Consensus 76 e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~ 143 (323)
T cd05575 76 DYVNGGELFFHLQRER---------SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLC 143 (323)
T ss_pred cCCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCC
Confidence 9999999999987653 3558888999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ............
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~--- 213 (323)
T cd05575 144 KEGIEH--SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILNKPL--- 213 (323)
T ss_pred cccccC--CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCCC---
Confidence 753221 1222345689999999999998999999999999999999999999975321 111111100000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
......+..+.+++.+||+.||.+||++.
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 -----------------------------RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 00012355778999999999999999985
No 173
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=9.2e-41 Score=336.56 Aligned_cols=203 Identities=22% Similarity=0.306 Sum_probs=164.8
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCC------CCceeeeeeee
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKH------RNIVRVFTAFS 211 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~ 211 (473)
++...+++|++.++||+|+||.||+|. ..+++.||||+++... ........|+.++..++| +++++++++|.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 344456889999999999999999998 4568899999986422 223456678888877754 45888888875
Q ss_pred ccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEE
Q 012014 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVL 290 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil 290 (473)
. ...+.++|||++ +++|.+++.... .+++..+..|+.||+.||.||| + .|||||||||+|||
T Consensus 202 ~----~~~~~~iv~~~~-g~~l~~~l~~~~---------~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 202 N----ETGHMCIVMPKY-GPCLLDWIMKHG---------PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENIL 264 (467)
T ss_pred c----CCceEEEEEecc-CCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEE
Confidence 3 234679999998 789999887653 3568889999999999999999 7 59999999999999
Q ss_pred ecCCc----------------cEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHH
Q 012014 291 LDDEM----------------IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354 (473)
Q Consensus 291 ~~~~~----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 354 (473)
++.++ .+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell 339 (467)
T PTZ00284 265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY 339 (467)
T ss_pred EecCCcccccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH
Confidence 98765 49999999876432 1223456999999999999999999999999999999999
Q ss_pred hCCCCCCCCC
Q 012014 355 TGIRPSDGIF 364 (473)
Q Consensus 355 tg~~P~~~~~ 364 (473)
+|+.||.+..
T Consensus 340 tG~~pf~~~~ 349 (467)
T PTZ00284 340 TGKLLYDTHD 349 (467)
T ss_pred hCCCCCCCCC
Confidence 9999997643
No 174
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-40 Score=315.89 Aligned_cols=270 Identities=20% Similarity=0.271 Sum_probs=199.1
Q ss_pred cCCCCccceeecCCCeEEEEEEec-----------------CCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF-----------------DGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVR 205 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 205 (473)
.++|++.+.||+|+||.||++... +...+|+|+++... ......+.+|+.++..++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357999999999999999998532 23468999987432 223457889999999999999999
Q ss_pred eeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC--CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeecc
Q 012014 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW--RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCN 283 (473)
Q Consensus 206 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~D 283 (473)
+++++... ...+++|||+++|+|.+++........ ......+++.++..++.|++.||.||| +++++|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~d 155 (296)
T cd05095 84 LLAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRD 155 (296)
T ss_pred EEEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeeccc
Confidence 99998543 357999999999999999976543211 111123668889999999999999999 99999999
Q ss_pred CCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh--CCCCCC
Q 012014 284 LKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT--GIRPSD 361 (473)
Q Consensus 284 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~P~~ 361 (473)
|||+||+++.++.++|+|||+++.+.............++..|+|||...+..++.++|||||||++|||++ |..||.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 999999999999999999999986533221111122234678999999888889999999999999999998 778886
Q ss_pred CCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 362 GIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
.....+. +.......... .... ..+.+..++..+.+|+.+||+.||++|||
T Consensus 236 ~~~~~~~-~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 286 (296)
T cd05095 236 QLSDEQV-IENTGEFFRDQ-GRQV---------------------------YLPKPALCPDSLYKLMLSCWRRNAKERPS 286 (296)
T ss_pred ccChHHH-HHHHHHHHhhc-cccc---------------------------cCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 5322111 00000000000 0000 00001124568889999999999999999
Q ss_pred hHHHHHHHH
Q 012014 442 INDVESRLR 450 (473)
Q Consensus 442 ~~ev~~~L~ 450 (473)
+.||++.|+
T Consensus 287 ~~~i~~~l~ 295 (296)
T cd05095 287 FQEIHATLL 295 (296)
T ss_pred HHHHHHHHh
Confidence 999999886
No 175
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.6e-40 Score=309.02 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=192.4
Q ss_pred eeecCCCeEEEEEEec---CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEe
Q 012014 152 LIGAGNFGSVYNGTLF---DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKF 227 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 227 (473)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999743 355799999875432 224568899999999999999999998732 256899999
Q ss_pred cCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccc
Q 012014 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307 (473)
Q Consensus 228 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 307 (473)
+++|+|.+++..... .+++..++.++.|++.||.||| +++++||||||+||+++.++.+||+|||++..
T Consensus 76 ~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 144 (257)
T cd05115 76 ASGGPLNKFLSGKKD--------EITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKA 144 (257)
T ss_pred CCCCCHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCcccc
Confidence 999999999975432 3668999999999999999999 89999999999999999999999999999986
Q ss_pred cCccccccc-eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 308 LPAIDKQNR-FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 308 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
......... .....++..|+|||.+.+..++.++||||||+++|++++ |..||....... ....+....+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~------ 216 (257)
T cd05115 145 LGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIEQGKR------ 216 (257)
T ss_pred ccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCCC------
Confidence 543322111 111223578999999988889999999999999999996 999997642211 1111100000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...+..++.++.+++.+||..||++||++.+|.+.|+.+
T Consensus 217 ----------------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 ----------------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 001123456888999999999999999999999999865
No 176
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.7e-41 Score=320.25 Aligned_cols=267 Identities=23% Similarity=0.362 Sum_probs=200.6
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCC--EEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGT--TIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 218 (473)
.++|++.+.||+|+||.||+|.. .++. .+|+|.++... ......+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~----- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----- 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC-----
Confidence 46789999999999999999984 3454 45777665322 22335688899999999 899999999997543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCC-------cchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRP-------LNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~-------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~ 291 (473)
...++||||+++|+|.+++.........+ ....+++.+++.++.|++.||+||| ++|++||||||+|||+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEe
Confidence 36799999999999999997654221110 1124678899999999999999999 9999999999999999
Q ss_pred cCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccH
Q 012014 292 DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNL 370 (473)
Q Consensus 292 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~ 370 (473)
+.++.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||.+....+
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 231 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--- 231 (303)
T ss_pred cCCCcEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---
Confidence 99999999999998643211 11111224667999999988889999999999999999998 999996532211
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
..... +... . ...+...+..+.+|+.+||+.||++|||+.++++.|+
T Consensus 232 --~~~~~-~~~~----~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 232 --LYEKL-PQGY----R--------------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred --HHHHH-hcCC----c--------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11000 0000 0 0001123456789999999999999999999999999
Q ss_pred HHHHhhc
Q 012014 451 LIRRKLL 457 (473)
Q Consensus 451 ~l~~~~~ 457 (473)
.+.+.-.
T Consensus 279 ~~~~~~~ 285 (303)
T cd05088 279 RMLEERK 285 (303)
T ss_pred HHHHhhh
Confidence 8865543
No 177
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.5e-40 Score=311.42 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=186.5
Q ss_pred ceeecCCCeEEEEEEecC---CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++.+++||||+++++++.+. ...++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEEE
Confidence 358999999999998533 45789998864332 2234688899999999999999999987543 35799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|.+++....... ....++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||+++
T Consensus 76 ~~~~g~L~~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~ 148 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAE----LMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSH 148 (269)
T ss_pred CCCCCcHHHHHHHhhhcc----cccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccc
Confidence 999999999997543211 112346677889999999999999 9999999999999999999999999999997
Q ss_pred ccCccccccceeeccCCCCcCCCccccCC-------CCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGC-------EASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
...............|+..|+|||++.+. .++.++||||||+++|||++ |..||......+. ..+. .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~---~ 223 (269)
T cd05087 149 NKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYT---V 223 (269)
T ss_pred cccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH---h
Confidence 54332221222234578889999987642 35789999999999999996 9999975432211 0000 0
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
........++. .....+..+.+++..|| .+|++|||++||+..|+
T Consensus 224 ~~~~~~~~~~~--------------------------~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 224 REQQLKLPKPR--------------------------LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hcccCCCCCCc--------------------------cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000000 00113445778999999 68999999999998774
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.8e-40 Score=308.42 Aligned_cols=250 Identities=20% Similarity=0.280 Sum_probs=197.9
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
+|++.+.||+|+||.||++. ..+++.+|+|.++... ....+.+.+|+.+++.++||||+++++.+.+ ....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-----DGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEE
Confidence 47888999999999999998 4578999999986432 3345678899999999999999999999754 347899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++|+|.+++...... .++...+..++.|++.||.||| +++|+|+||||+||+++.++.++|+|||
T Consensus 76 v~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg 145 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRGK-------LFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFG 145 (255)
T ss_pred EEeeCCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccC
Confidence 99999999999998654321 3568889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
.+........ ......|++.|+|||++.+..++.++|+||||+++|+|++|..||..... .............
T Consensus 146 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~ 218 (255)
T cd08219 146 SARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYK 218 (255)
T ss_pred cceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCC
Confidence 9976543221 12234588999999999988899999999999999999999999975211 1111111000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. .+...+..+.+|+.+||+.||++|||+.||+.+
T Consensus 219 ~-------------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 P-------------------------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred C-------------------------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 011234567899999999999999999999865
No 179
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.9e-41 Score=321.22 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=187.5
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|. ..+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 469999999999998 4567899999997532 22335578899999888 69999999998754 34689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 76 e~~~~~~L~~~~~~~~---------~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~ 143 (327)
T cd05617 76 EYVNGGDLMFHMQRQR---------KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMC 143 (327)
T ss_pred eCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccc
Confidence 9999999999887543 3668899999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc-ccHHHHHHhhcCcchhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK-MNLRNFVKMALPQRAEE 384 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~~~~ 384 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||....... ................
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 220 (327)
T cd05617 144 KEGLGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI- 220 (327)
T ss_pred eeccCC--CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-
Confidence 753221 122334569999999999999999999999999999999999999997543221 1111111000000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
..+...+..+.+++.+||+.||++||++.
T Consensus 221 ------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 ------------------------------RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00112345678899999999999999864
No 180
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.4e-40 Score=308.45 Aligned_cols=254 Identities=25% Similarity=0.397 Sum_probs=199.4
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.++|.+...||+|+||.||+|....+..+|+|.+.... ...+.+.+|+.+++.++|||++++++++.. ...++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYI 77 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEE
Confidence 35688899999999999999997666789999876432 234678899999999999999999988632 24689
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++|+|.+++...... .+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg 147 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGK-------YLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFG 147 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCc
Confidence 99999999999999764321 2558889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++........ .......++..|+|||...+..++.++||||||+++|+|++ |..||.+...... .... .....
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~-~~~~~--- 221 (260)
T cd05069 148 LARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-LEQV-ERGYR--- 221 (260)
T ss_pred cceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH-HcCCC---
Confidence 9976543221 11122335778999999988889999999999999999999 8999975322110 0000 00000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
...+...+..+.+++.+||+.||++|||+++|++.|+.
T Consensus 222 -------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 -------------------------------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------------------------------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00011345678899999999999999999999999874
No 181
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.2e-40 Score=306.93 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=200.9
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.++|++.+.||+|+||.||+|.. .|+.||+|.++.... ..+.+.+|+.++..++|+||+++++++.. ....++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeEE
Confidence 46788999999999999999985 579999999975433 45678999999999999999999999754 336799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++++|.+++...... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.+||+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g 147 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRA-------VITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFG 147 (256)
T ss_pred EEEecCCCcHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccc
Confidence 99999999999999765421 3568899999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
.++....... ...++..|+|||.+.+..++.++||||||+++|+|++ |..||....... +.........
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~--- 217 (256)
T cd05039 148 LAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVEKGYR--- 217 (256)
T ss_pred cccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhcCCC---
Confidence 9986632211 2234667999999988889999999999999999997 999986432110 0000000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...+...+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 218 -------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 -------------------------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -------------------------------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 000112456788999999999999999999999998753
No 182
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2e-41 Score=325.93 Aligned_cols=240 Identities=25% Similarity=0.264 Sum_probs=184.1
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHH-HHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECK-AAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|+. .+++.||+|++.... ......+..|.. +++.++||||+++++++... ...++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-----DKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC-----CeEEEEE
Confidence 4699999999999984 467889999987432 112233444444 46778999999999987543 3679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||++
T Consensus 76 e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a 143 (325)
T cd05602 76 DYINGGELFYHLQRER---------CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLC 143 (325)
T ss_pred eCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCC
Confidence 9999999999997643 3557788889999999999999 999999999999999999999999999999
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... ..........
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~i~~~~~--- 213 (325)
T cd05602 144 KENIEH--NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----MYDNILNKPL--- 213 (325)
T ss_pred cccccC--CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----HHHHHHhCCc---
Confidence 754221 122334569999999999999899999999999999999999999997532111 1110000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
......+..+.+++.+||+.||.+||++.+.+
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 -----------------------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 00012345778999999999999999987543
No 183
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-40 Score=316.91 Aligned_cols=270 Identities=20% Similarity=0.248 Sum_probs=200.5
Q ss_pred cCCCCccceeecCCCeEEEEEEecC-----------------CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD-----------------GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVR 205 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 205 (473)
.++|++.+.||+|+||.||+|.... +..||+|.+..... .....+.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578999999999999999987432 24589999874332 23457889999999999999999
Q ss_pred eeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCC--CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeecc
Q 012014 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR--PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCN 283 (473)
Q Consensus 206 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~D 283 (473)
+++++... ...+++|||+++++|.+++......... .....+++..++.++.|++.||.||| +++++|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccc
Confidence 99998543 3679999999999999999765421100 01113668899999999999999999 89999999
Q ss_pred CCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh--CCCCCC
Q 012014 284 LKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT--GIRPSD 361 (473)
Q Consensus 284 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~P~~ 361 (473)
|||+||+++.++.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999976543322222223446788999999988889999999999999999998 777876
Q ss_pred CCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 362 GIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
...... .+............... ...+..++.++.+|+.+||+.||.+|||
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rpt 286 (296)
T cd05051 236 HLTDQQ-VIENAGHFFRDDGRQIY----------------------------LPRPPNCPKDIYELMLECWRRDEEDRPT 286 (296)
T ss_pred CcChHH-HHHHHHhcccccccccc----------------------------CCCccCCCHHHHHHHHHHhccChhcCCC
Confidence 532111 01111000000000000 0001124568899999999999999999
Q ss_pred hHHHHHHHH
Q 012014 442 INDVESRLR 450 (473)
Q Consensus 442 ~~ev~~~L~ 450 (473)
+.||++.|+
T Consensus 287 ~~el~~~L~ 295 (296)
T cd05051 287 FREIHLFLQ 295 (296)
T ss_pred HHHHHHHhc
Confidence 999998875
No 184
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.2e-41 Score=323.22 Aligned_cols=242 Identities=20% Similarity=0.243 Sum_probs=189.0
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCcee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 220 (473)
+|...+.||+|+||.||+|. ..+++.||+|+++... ....+.+..|..++..+. |++|+++++++.+ ...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-----VDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-----CCE
Confidence 47778999999999999998 4578999999987432 233456778888888885 5778888888754 336
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++.++..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~---------~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~ 143 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG---------KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIA 143 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEe
Confidence 899999999999999997654 3668899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... ........
T Consensus 144 Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----~~~~i~~~ 216 (323)
T cd05615 144 DFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-----LFQSIMEH 216 (323)
T ss_pred ccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhC
Confidence 999987543221 12234568999999999998889999999999999999999999997642211 11100000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.. ..+...+..+.+++.+||+.||.+|++..
T Consensus 217 ~~--------------------------------~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 217 NV--------------------------------SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CC--------------------------------CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 00 00112345678899999999999999853
No 185
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.6e-40 Score=307.44 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=198.7
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|.+.+.||+|++|.||+|.. .+++.|++|.+.... ......+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 477889999999999999984 568999999987432 33456788999999999999999999997543 4679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++...... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.++|+||
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df 145 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGR-------PLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDL 145 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEccc
Confidence 999999999999999764221 3568888999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|+++...... .......|++.|+|||+..+..++.++||||||+++|+|++|..||....... ..........
T Consensus 146 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~ 218 (256)
T cd08529 146 GVAKLLSDNT--NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-----LILKIIRGVF 218 (256)
T ss_pred ccceeccCcc--chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHcCCC
Confidence 9988664422 11223458899999999999889999999999999999999999997543111 1110000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ......+..+.+++.+||+.+|++||++.+|++
T Consensus 219 ~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 219 P-------------------------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred C-------------------------------CCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 0 001134567889999999999999999999976
No 186
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-43 Score=307.05 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=205.1
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
-|.+..+||+|+||.||+|. ...|+.+|||.+.. ..+..++.+|+.+|++++.|++|++||.|... ..+|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~-----sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH-----SDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccC-----CceEee
Confidence 47788999999999999998 56799999999753 34678899999999999999999999987543 368999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
||||..|++.+.++.+.. .+++.++..+++..++||+||| ...-||||||..|||++.+|.+||+|||.
T Consensus 107 MEYCGAGSiSDI~R~R~K--------~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRK--------PLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred hhhcCCCcHHHHHHHhcC--------CccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccc
Confidence 999999999999976643 4779999999999999999999 88899999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
+..+.+. -....+..|||.|||||++..-.|+.++||||||++..||..|++||..+...... ..+|.....
T Consensus 176 AGQLTDT--MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------FMIPT~PPP 247 (502)
T KOG0574|consen 176 AGQLTDT--MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------FMIPTKPPP 247 (502)
T ss_pred cchhhhh--HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee------EeccCCCCC
Confidence 9766432 23344567999999999999999999999999999999999999999875433211 112222222
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.++ .+..-+.++.+++..||-++|++|-|+-++++
T Consensus 248 TF~----------------------------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 248 TFK----------------------------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCC----------------------------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 111 13345667889999999999999999988875
No 187
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.7e-41 Score=326.53 Aligned_cols=240 Identities=25% Similarity=0.270 Sum_probs=184.6
Q ss_pred ceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHH-HHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECK-AAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|+ ..+|+.||+|++.... ......+..|.. +++.++||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----TEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-----CCEEEEEE
Confidence 469999999999998 4578999999987432 122334555554 4677899999999998754 34679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||++
T Consensus 76 e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~ 143 (325)
T cd05604 76 DFVNGGELFFHLQRER---------SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLC 143 (325)
T ss_pred cCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCc
Confidence 9999999999887543 3568889999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||...... ........... .
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~~~~~~--~ 214 (325)
T cd05604 144 KEGIAQ--SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNILHKPL--V 214 (325)
T ss_pred ccCCCC--CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHHHcCCc--c
Confidence 753221 12223456899999999999999999999999999999999999999753211 11111100000 0
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
.....+..+.+++.+||+.||.+||++.+.+
T Consensus 215 ------------------------------~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 215 ------------------------------LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred ------------------------------CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 0011344677899999999999999986433
No 188
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.6e-40 Score=314.38 Aligned_cols=264 Identities=22% Similarity=0.349 Sum_probs=200.7
Q ss_pred ccCCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
..++|++.+.||+|+||.||+|... ++..||+|++..... .....+.+|+.++.+++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~-- 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG-- 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--
Confidence 3467999999999999999999842 467899999864322 2235688999999999999999999987543
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCC-------------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeec
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWR-------------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHC 282 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-------------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~ 282 (473)
...+++|||+++|+|.+++......... .....+++.+++.++.|++.||.||| +++++||
T Consensus 81 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~ 154 (288)
T cd05050 81 ---KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHR 154 (288)
T ss_pred ---CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 3579999999999999999754321100 11124678889999999999999999 9999999
Q ss_pred cCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCC
Q 012014 283 NLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSD 361 (473)
Q Consensus 283 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~ 361 (473)
||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 155 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 155 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred cccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999876533221111122234667999999988899999999999999999998 888986
Q ss_pred CCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 362 GIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
+.... ............ ..+...+..+.+|+.+||+.||.+|||
T Consensus 235 ~~~~~-----~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt 278 (288)
T cd05050 235 GMAHE-----EVIYYVRDGNVL-------------------------------SCPDNCPLELYNLMRLCWSKLPSDRPS 278 (288)
T ss_pred CCCHH-----HHHHHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 53221 111111000000 001124567889999999999999999
Q ss_pred hHHHHHHHH
Q 012014 442 INDVESRLR 450 (473)
Q Consensus 442 ~~ev~~~L~ 450 (473)
+.||+..|+
T Consensus 279 ~~el~~~l~ 287 (288)
T cd05050 279 FASINRILQ 287 (288)
T ss_pred HHHHHHHhh
Confidence 999999886
No 189
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.9e-40 Score=311.99 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=195.0
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.|+..++||+|+||.||++. ..+++.||+|.+...... ....+.+|+.++.+++|+||+++++.+.+. ...
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-----CEE
Confidence 36778899999999999998 457899999998643221 224577899999999999999999987543 368
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++++|.+++...... .+++.++..++.|++.||.||| +++|+||||||+||+++.++.++|+|
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~-------~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~D 145 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEA-------GFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISD 145 (285)
T ss_pred EEEEEecCCCcHHHHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEee
Confidence 9999999999999998654321 3668889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... ......||..|+|||++.+..++.++||||||+++|+|++|..||........ ... ...... .
T Consensus 146 fg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~-~~~~~~-~ 219 (285)
T cd05630 146 LGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REE-VERLVK-E 219 (285)
T ss_pred ccceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHH-HHhhhh-h
Confidence 99987653322 12234689999999999998999999999999999999999999975322110 000 000000 0
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
... ......+..+.+|+..||+.||++||| +.|+++
T Consensus 220 ~~~------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 220 VQE------------------------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhh------------------------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 000 001123456789999999999999999 788876
No 190
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.3e-40 Score=313.09 Aligned_cols=268 Identities=19% Similarity=0.248 Sum_probs=204.3
Q ss_pred chhhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecc
Q 012014 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGV 213 (473)
Q Consensus 136 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 213 (473)
.++.+....++|++.+.||+|+||.||+|. ..+++.+|+|+++... .....+.+|+.++..+ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 456667788999999999999999999998 4568899999876422 2345688899999999 699999999998655
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
........++||||+++++|.+++...... ...+++..+..++.|++.||.||| +++++||||||+||+++.
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~ 159 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKR-----GERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTT 159 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhcc-----CccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECC
Confidence 444556789999999999999987643211 013567888999999999999999 899999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccC-----CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-----CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM 368 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~ 368 (473)
++.+||+|||+++...... .......|++.|+|||++.. ..++.++|||||||++|+|++|..||.......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~- 236 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR- 236 (286)
T ss_pred CCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-
Confidence 9999999999998654322 12223458999999998753 347889999999999999999999987532111
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...... ........ .+...+..+.+|+.+||+.||++|||+.||++.
T Consensus 237 ---~~~~~~-~~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 ---ALFKIP-RNPPPTLH-----------------------------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ---HHhhcc-ccCCCccc-----------------------------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000000 00000000 001134568899999999999999999999864
No 191
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.6e-40 Score=308.50 Aligned_cols=254 Identities=19% Similarity=0.248 Sum_probs=201.2
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|.+.+.||+|+||.||+|.. .+++.+++|.+........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEE
Confidence 46789999999999999999984 4678999999986555566789999999999999999999998754 33689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++..... .++..++..++.|++.||.||| +++++|+||+|+||+++.++.+||+||
T Consensus 77 l~~e~~~~~~l~~~~~~~~~--------~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTRG--------PLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred EEEeCCCCCcHHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECcc
Confidence 99999999999999876521 3568889999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCC---CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC---EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|++....... .......|+..|+|||.+.+. .++.++||||||+++|+|++|..||.......... .......+
T Consensus 146 g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~~~~~ 222 (262)
T cd06613 146 GVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKSNFP 222 (262)
T ss_pred ccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccCC
Confidence 9997654321 122234578899999998776 78999999999999999999999997533211100 00000000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. .. .......+..+.+++.+||+.||.+|||+++|+.
T Consensus 223 ~-------~~------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 P-------PK------------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred C-------cc------------------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00 0011234567899999999999999999999874
No 192
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.7e-40 Score=322.08 Aligned_cols=281 Identities=17% Similarity=0.213 Sum_probs=198.2
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
..++|.+.+.||+|+||.||+|. ..+++.||+|++..... .....+.+|+.+++.++||||++++++|..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 45789999999999999999998 45788999999864321 233557789999999999999999998754321 122
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+++++++ +++|.+++... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~----------~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~k 158 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ----------KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELR 158 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEE
Confidence 3568999988 88999888643 3668899999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+ .+..+....
T Consensus 159 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~ 232 (343)
T cd07878 159 ILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVV 232 (343)
T ss_pred EcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHh
Confidence 9999999865332 223458999999999877 468999999999999999999999997532111 111111111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.. ...+............... ...... ..............+.+|+.+||+.||++|||+.|+++.
T Consensus 233 ~~-~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 233 GT-PSPEVLKKISSEHARKYIQ---SLPHMP-QQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CC-CCHHHHHhcchhhHHHHhh---cccccc-chhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0111111000000000000 000000 000000001123457899999999999999999999853
No 193
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-40 Score=310.71 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=202.4
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.-++|.+.++||+|+||.||+|...+++.+|+|.+.... .....+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCceE
Confidence 346899999999999999999997777889999987433 345678999999999999999999998754 23579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++.++..++.|++.||.||| +++++|+||||+||+++.++.+||+||
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~-------~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~ 147 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGK-------KLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADF 147 (261)
T ss_pred EEEeccCCCCHHHHHhccccC-------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECcc
Confidence 999999999999999765422 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+..... .+....... .
T Consensus 148 g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~~-~-- 222 (261)
T cd05034 148 GLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVERGY-R-- 222 (261)
T ss_pred ccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCC-C--
Confidence 9998664321 111112234678999999998889999999999999999999 999996532111 111100000 0
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
...+...+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 223 --------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 --------------------------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00011235578899999999999999999999998874
No 194
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.3e-41 Score=329.05 Aligned_cols=202 Identities=24% Similarity=0.362 Sum_probs=171.1
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|+..+.||+|+||.||++. ..+++.||+|+++... ......+.+|+.++..++||||+++++.+.+ ...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 468889999999999999998 4568999999997422 2334567889999999999999999998754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~ 143 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD---------TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLS 143 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEe
Confidence 899999999999999997654 3568889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc---------------------------------cceeeccCCCCcCCCccccCCCCCcccchhhHh
Q 012014 301 DFGMARFLPAIDKQ---------------------------------NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFG 347 (473)
Q Consensus 301 Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 347 (473)
|||+++.+...... .......||+.|+|||++.+..++.++||||||
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 99998754321100 011234699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC
Q 012014 348 ILLLEMFTGIRPSDGI 363 (473)
Q Consensus 348 ~il~elltg~~P~~~~ 363 (473)
|++|||++|..||.+.
T Consensus 224 vilyel~tG~~Pf~~~ 239 (360)
T cd05627 224 VIMYEMLIGYPPFCSE 239 (360)
T ss_pred ceeeecccCCCCCCCC
Confidence 9999999999999753
No 195
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-40 Score=313.87 Aligned_cols=250 Identities=20% Similarity=0.257 Sum_probs=200.5
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|++.+.||.|+||.||+|. ..+++.|++|.+........+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 92 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GDELF 92 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----CceEE
Confidence 3568999999999999999998 46789999999976555556788999999999999999999999854 34689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|+||+++++|.+++... .+++.++..++.|++.||.||| +++++||||||+||+++.++.+||+||
T Consensus 93 lv~e~~~~~~L~~~~~~~----------~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~df 159 (296)
T cd06655 93 VVMEYLAGGSLTDVVTET----------CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDF 159 (296)
T ss_pred EEEEecCCCcHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccC
Confidence 999999999999998653 2558899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|+..|+|||.+.+..++.++|||||||++|+|++|..||.+...... ...... ...
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~----~~~~~~-~~~ 232 (296)
T cd06655 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIAT-NGT 232 (296)
T ss_pred ccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHh-cCC
Confidence 99876543221 12234588999999999988899999999999999999999999976322111 000000 000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
... ..+...+..+.+++.+||..||.+|||+.+|+.
T Consensus 233 ~~~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 233 PEL-----------------------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ccc-----------------------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 001224557888999999999999999999874
No 196
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-40 Score=311.32 Aligned_cols=257 Identities=23% Similarity=0.382 Sum_probs=198.5
Q ss_pred cCCCCccceeecCCCeEEEEEEec-CCC---EEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF-DGT---TIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.++|+..+.||+|+||.||+|... ++. .+|+|.++... ......+.+|++++.+++||||+++++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF----- 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC-----
Confidence 457888999999999999999853 333 68999886432 22345688999999999999999999998543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++++|.+++..... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~k 147 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDG--------EFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECK 147 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEE
Confidence 357999999999999999975432 3568889999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccce-eeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 299 VGDFGMARFLPAIDKQNRF-ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
|+|||++............ .....+..|+|||++.+..++.++|||||||++|||++ |..||...... .....
T Consensus 148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~ 222 (268)
T cd05063 148 VSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKA 222 (268)
T ss_pred ECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHH
Confidence 9999999766432211111 11123457999999988889999999999999999998 99999653211 11111
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..... ..+...+++..+.+++.+||+.||++||++.+|++.|+++
T Consensus 223 i~~~~-------------------------------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 223 INDGF-------------------------------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HhcCC-------------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00000 0000112456788999999999999999999999999875
No 197
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.3e-40 Score=308.18 Aligned_cols=258 Identities=22% Similarity=0.272 Sum_probs=197.2
Q ss_pred hhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
++..++++.....||+|+||.||+|. ..++..||+|.+........+.+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 77 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN----- 77 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-----
Confidence 34456677777899999999999998 456788999998755544556789999999999999999999997543
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIG 297 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~ 297 (473)
...++++||+++++|.+++...... .......+..++.||+.||.||| +++|+||||||+||+++. ++.+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~ 148 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSKWGP------LKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVV 148 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHhccc------CCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeE
Confidence 4679999999999999999754211 01146778889999999999999 999999999999999976 6799
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCC--CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE--ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
+|+|||++........ ......|++.|+|||++.+.. ++.++||||||+++|+|++|..||............ .
T Consensus 149 ~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~--~ 224 (268)
T cd06624 149 KISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK--V 224 (268)
T ss_pred EEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh--h
Confidence 9999999876543221 122335789999999986643 788999999999999999999999653221110000 0
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. ... .+..+......+.+++.+||+.+|++|||+.||++
T Consensus 225 ~~-~~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 225 GM-FKI-------------------------------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hh-hcc-------------------------------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 000 00011234567889999999999999999999875
No 198
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.3e-40 Score=311.89 Aligned_cols=256 Identities=23% Similarity=0.406 Sum_probs=197.7
Q ss_pred CCCCccceeecCCCeEEEEEEec-CC---CEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DG---TTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
++|++.+.||+|+||.||+|... ++ ..||+|.++... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----CC
Confidence 45788999999999999999843 33 369999986432 2234578999999999999999999998743 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++|+|.+++..... .+++.+++.++.|++.||.||| +++++|+||||+||+++.++.+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl 147 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG--------QFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKV 147 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEE
Confidence 67999999999999999976432 3568889999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeecc---CCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 012014 300 GDFGMARFLPAIDKQNRFICIK---GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~ 375 (473)
+|||++................ ++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+.
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~~~i~ 225 (269)
T cd05065 148 SDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VINAIE 225 (269)
T ss_pred CCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HHHHHH
Confidence 9999987654322111111111 2457999999998899999999999999999886 999996532111 111110
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...+ .+...+++..+.+++.+||+.+|++||++.+|+..|+.+
T Consensus 226 ~~~~----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 QDYR----------------------------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCc----------------------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 000123456788999999999999999999999998865
No 199
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3e-40 Score=314.72 Aligned_cols=259 Identities=23% Similarity=0.382 Sum_probs=199.7
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCC----EEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGT----TIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
.++|+..+.||+|+||.||+|.+ .++. .+|+|.+..... .....+.+|+.++..++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 35688889999999999999984 3454 578888764322 1233678999999999999999999987532
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
..++++||+++|+|.+++..... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~ 148 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHEHKD--------NIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHV 148 (303)
T ss_pred --CceeeehhcCCCCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCce
Confidence 34789999999999999876532 2557889999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.+..... ...+...
T Consensus 149 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~~~~~~ 226 (303)
T cd05110 149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IPDLLEK 226 (303)
T ss_pred EEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHC
Confidence 9999999987644322222223345778999999998889999999999999999997 999997532111 1111110
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
.. .. ..+..++..+.+++..||..||++|||+.+|++.|+.+.+.
T Consensus 227 ~~--~~--------------------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 227 GE--RL--------------------------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CC--CC--------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 00 00011345678999999999999999999999999998654
No 200
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.3e-40 Score=306.22 Aligned_cols=248 Identities=27% Similarity=0.393 Sum_probs=193.5
Q ss_pred ceeecCCCeEEEEEEe-cC---CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FD---GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|.. .. +..+|+|.+..... ...+.+.+|+.+++.++||||+++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 4699999999999973 22 26899999874432 234578899999999999999999998642 2468999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+++|+||||+||+++.++.+||+|||++
T Consensus 75 e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~ 142 (257)
T cd05060 75 ELAPLGPLLKYLKKRR---------EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMS 142 (257)
T ss_pred EeCCCCcHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEecccccc
Confidence 9999999999997654 3558899999999999999999 899999999999999999999999999999
Q ss_pred cccCcccccc-ceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 306 RFLPAIDKQN-RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 306 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ +...+....+ .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--~~~~~~~~~~---~ 217 (257)
T cd05060 143 RALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--VIAMLESGER---L 217 (257)
T ss_pred ceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCc---C
Confidence 8664332111 1111223567999999998889999999999999999998 999997532211 1111110000 0
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..+..++..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 218 -------------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 -------------------------------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -------------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 00112456788999999999999999999999999876
No 201
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-40 Score=316.83 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=162.5
Q ss_pred cceeecCCCeEEEEEEec---CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 150 ANLIGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
..+||+|+||.||+|... ++..||+|.++.. .....+.+|+.+++.++||||+++++++... .....++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence 468999999999999853 4578999988643 2345678999999999999999999988542 2346799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe----cCCccEEEeec
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL----DDEMIGHVGDF 302 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~----~~~~~~kl~Df 302 (473)
|+. ++|.+++..............+++..+..++.||+.||.||| +++|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 985 588888764332211112224678889999999999999999 9999999999999999 56679999999
Q ss_pred ccccccCccccc-cceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 303 GMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 303 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|+++........ .......||+.|+|||++.+. .++.++|||||||++|||+||.+||...
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 999876443211 122344689999999998764 5899999999999999999999999754
No 202
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.7e-40 Score=312.22 Aligned_cols=273 Identities=23% Similarity=0.334 Sum_probs=203.8
Q ss_pred CCCCccceeecCCCeEEEEEEec-----CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-----DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|...+.||+|+||.||+|... +++.+|+|+++..... ....+.+|+++++.++||||+++++++... +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 45778899999999999999843 3688999998754432 356799999999999999999999987542 24
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+++|||+++++|.+++..... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.++
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~--------~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~ 149 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD--------QINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVK 149 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc--------ccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEE
Confidence 567999999999999999976542 3568899999999999999999 89999999999999999999999
Q ss_pred EeecccccccCcccccc-ceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQN-RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++.......... ......++..|+|||.+.+..++.++||||||+++|||++|..|+......... +....
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~ 226 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIA 226 (284)
T ss_pred EcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccc
Confidence 99999998765322111 111223456799999998888999999999999999999999998653222110 00000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..... .......+.... ....+..++.++.+|+.+||+.||++|||+.||++.|+.+
T Consensus 227 ~~~~~----~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 227 QGQMI----VTRLLELLKEGE--------------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccc----HHHHHHHHHcCC--------------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00000 000000000000 0001123457899999999999999999999999999876
No 203
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-40 Score=314.83 Aligned_cols=250 Identities=19% Similarity=0.227 Sum_probs=200.0
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|.+.+.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++||||++++++|... ...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CEEE
Confidence 3679999999999999999998 457999999999765555567788999999999999999999998543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+||
T Consensus 93 lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 93 VVMEYLAGGSLTDVVTET----------CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred EeecccCCCCHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcC
Confidence 999999999999998653 2457888999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+......... ... ...
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~----~~~ 232 (297)
T cd06656 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT----NGT 232 (297)
T ss_pred ccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ecc----CCC
Confidence 99876543221 12234588999999999988899999999999999999999999965322111000 000 000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. ...+...+..+.+|+.+||..||++|||+.+|++
T Consensus 233 ~~-----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 233 PE-----------------------------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CC-----------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0001224556789999999999999999999987
No 204
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5e-40 Score=307.21 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=196.7
Q ss_pred CCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC------CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG------GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|.+.+.||+|+||.||+|...+++.+|+|.++..... ....+.+|+.++++++|+||+++++++.+. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-----N 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----C
Confidence 47888999999999999999778999999998743221 124588899999999999999999998543 4
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+|+||+|+||+++.++.++|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l 143 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFG---------PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKL 143 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEe
Confidence 7899999999999999997643 2557888899999999999999 899999999999999999999999
Q ss_pred eecccccccCccc----cccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 300 GDFGMARFLPAID----KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 300 ~Dfg~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
+|||++....... .........|+..|+|||++.+..++.++||||||+++|+|++|..||....... ....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~ 219 (265)
T cd06631 144 IDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMFY 219 (265)
T ss_pred ccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HHHH
Confidence 9999987653211 1112223458999999999998889999999999999999999999997532111 1000
Q ss_pred hhcC-cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 376 MALP-QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 376 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... .... ..+...+..+.+++.+||+.||.+|||+.|+++
T Consensus 220 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 220 IGAHRGLMP-------------------------------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhhccCCCC-------------------------------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0000 001124567889999999999999999999874
No 205
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3e-40 Score=311.98 Aligned_cols=250 Identities=22% Similarity=0.295 Sum_probs=193.3
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
|+..++||+|+||+||+|. ..+++.+|+|.+..... .....+.+|+.++..++|+||+++++.+.. ....+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-----CCEEE
Confidence 6677899999999999998 45789999999864322 223457789999999999999999988754 33689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+||
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Df 146 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGNP-------GFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDL 146 (285)
T ss_pred EEEEeccCccHHHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecC
Confidence 999999999999988654321 3668999999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++....... ......|+..|+|||++.+..++.++|+||||+++|+|++|..||.+...... ...... ......
T Consensus 147 g~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~-~~~~~~ 221 (285)
T cd05632 147 GLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDR-RVLETE 221 (285)
T ss_pred CcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-hhhccc
Confidence 9987653321 12234689999999999888899999999999999999999999975321110 000000 000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
.. .....+..+.+|+.+||+.||++||| +.+++.
T Consensus 222 ~~-------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 222 EV-------------------------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cc-------------------------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 00 01123456788999999999999999 556655
No 206
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.1e-40 Score=310.61 Aligned_cols=256 Identities=21% Similarity=0.368 Sum_probs=200.1
Q ss_pred CCCCccceeecCCCeEEEEEEecC----CCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
++|.+.++||+|+||.||+|...+ ...||+|...... ....+.+.+|+.+++.++||||+++++++.+ .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 468889999999999999998433 2468999886443 2334578899999999999999999998753 2
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++|+|.+++..... .+++..++.++.|++.||.||| +++++||||||+||+++.++.+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKY--------SLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEE
Confidence 35899999999999999976432 2568899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++........ ......++..|+|||.+....++.++||||||+++|+|++ |..||.+...... ........
T Consensus 149 ~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-~~~~~~~~- 225 (270)
T cd05056 149 GDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-IGRIENGE- 225 (270)
T ss_pred ccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHcCC-
Confidence 999999865443211 1112234568999999988889999999999999999996 9999976432211 00000000
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
. ...+..++..+.+++.+||..+|.+|||+.++++.|+.+..
T Consensus 226 --~--------------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 226 --R--------------------------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred --c--------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 00012345678899999999999999999999999999864
No 207
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.1e-41 Score=323.30 Aligned_cols=237 Identities=24% Similarity=0.287 Sum_probs=182.6
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHH-HHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECK-AAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|+. .+++.||+|++.... ......+..|.. +++.++||||+++++++.+. ...++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA-----EKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----CEEEEEE
Confidence 4699999999999994 568999999987432 122334555554 57889999999999887543 4689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|..++.... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 143 (321)
T cd05603 76 DYVNGGELFFHLQRER---------CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLC 143 (321)
T ss_pred cCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCC
Confidence 9999999999886543 3557888899999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|..||.+... ............
T Consensus 144 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~--- 213 (321)
T cd05603 144 KEGVEP--EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHKPL--- 213 (321)
T ss_pred ccCCCC--CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcCCC---
Confidence 753221 1222345689999999999988899999999999999999999999975321 111111000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
..+......+.+++.+||+.||.+||++.
T Consensus 214 -----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 -----------------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----------------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 00112345678999999999999999864
No 208
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-40 Score=346.57 Aligned_cols=263 Identities=19% Similarity=0.222 Sum_probs=197.9
Q ss_pred hhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 138 KDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 138 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
.......++|.+.+.||+|+||.||+|. ..++..+|+|++.... ......+..|+.++..++|||||+++++|.+.
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de- 84 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK- 84 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec-
Confidence 3344556789999999999999999999 4567889999987432 22345688999999999999999999988643
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCC----CCCeeeccCCCCcEE
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDC----QPPIAHCNLKPSNVL 290 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----~~~iiH~Dlkp~Nil 290 (473)
.....+|||||+++|+|.++|...... ...+++..++.|+.||+.||.|||+.. .++||||||||+|||
T Consensus 85 --~~~~lyIVMEY~~gGSL~~lL~k~~~~-----~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 85 --ANQKLYILMEFCDAGDLSRNIQKCYKM-----FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred --CCCEEEEEEeCCCCCcHHHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 234679999999999999999753211 013668899999999999999999321 146999999999999
Q ss_pred ecC-----------------CccEEEeecccccccCccccccceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHH
Q 012014 291 LDD-----------------EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLL 351 (473)
Q Consensus 291 ~~~-----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ 351 (473)
++. .+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++||||||||+|
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILY 234 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIY 234 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHH
Confidence 964 3358999999998654322 1233468999999999864 45889999999999999
Q ss_pred HHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhc
Q 012014 352 EMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVAC 431 (473)
Q Consensus 352 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 431 (473)
+|++|..||..... ...+........ .+ .....+..+.+|+..|
T Consensus 235 ELLTGk~PF~~~~~----~~qli~~lk~~p--~l------------------------------pi~~~S~eL~dLI~~~ 278 (1021)
T PTZ00266 235 ELCSGKTPFHKANN----FSQLISELKRGP--DL------------------------------PIKGKSKELNILIKNL 278 (1021)
T ss_pred HHHHCCCCCCcCCc----HHHHHHHHhcCC--CC------------------------------CcCCCCHHHHHHHHHH
Confidence 99999999975321 111111110000 00 0011345788999999
Q ss_pred ccCCCCCCCChHHHHH
Q 012014 432 SAERPRERMKINDVES 447 (473)
Q Consensus 432 l~~dP~~RPt~~ev~~ 447 (473)
|..+|.+|||+.|++.
T Consensus 279 L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 279 LNLSAKERPSALQCLG 294 (1021)
T ss_pred hcCChhHCcCHHHHhc
Confidence 9999999999999984
No 209
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.8e-40 Score=317.70 Aligned_cols=268 Identities=24% Similarity=0.338 Sum_probs=203.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEec--------CCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeec
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSG 212 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 212 (473)
...+|.+.+.||+|+||.||+|... .+..||+|.++... ......+.+|+.++.++ +||||++++++|..
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3457899999999999999999732 12368999886432 22345788999999999 79999999999854
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCC-------CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW-------RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLK 285 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlk 285 (473)
. ...+++|||+++|+|.+++........ ......+++.+++.++.|++.||.||| +++++|||||
T Consensus 90 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlk 161 (334)
T cd05100 90 D-----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLA 161 (334)
T ss_pred C-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccc
Confidence 3 367999999999999999976432110 001123668889999999999999999 9999999999
Q ss_pred CCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCC
Q 012014 286 PSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIF 364 (473)
Q Consensus 286 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~ 364 (473)
|+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999986543322222222334567999999998889999999999999999998 888986532
Q ss_pred CCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 365 TGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
. ............. ..+..++..+.+|+.+||+.+|++|||+.|
T Consensus 242 ~-----~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 285 (334)
T cd05100 242 V-----EELFKLLKEGHRM-------------------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQ 285 (334)
T ss_pred H-----HHHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence 1 1111111000000 001124557889999999999999999999
Q ss_pred HHHHHHHHHH
Q 012014 445 VESRLRLIRR 454 (473)
Q Consensus 445 v~~~L~~l~~ 454 (473)
|++.|+.+..
T Consensus 286 ll~~l~~~~~ 295 (334)
T cd05100 286 LVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 210
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.6e-40 Score=305.50 Aligned_cols=256 Identities=25% Similarity=0.398 Sum_probs=199.4
Q ss_pred ceeecCCCeEEEEEEecC----CCEEEEEEeeccCCCC-chhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGG-SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|.... +..|++|.++...... ...+.+|++.+..++|+||+++++++.. ....+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 469999999999999543 7899999987544332 5678899999999999999999999754 34689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++++|.+++..............+++.++..++.|++.||.||| +++++||||||+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccc
Confidence 99999999999987521100000114679999999999999999999 999999999999999999999999999999
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
................++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~--- 224 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EVLEYLRKGY--- 224 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC---
Confidence 87654332222334457889999999988889999999999999999999 69999764211 1111000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
....+...+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 225 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ----------------------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----------------------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00011234668889999999999999999999998773
No 211
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-40 Score=314.13 Aligned_cols=198 Identities=26% Similarity=0.311 Sum_probs=168.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||+|+||.||++. ..++..+|+|.++.... .....+.+|++++.+++||||++++++|... ...+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEEE
Confidence 468999999999999999998 44688899998864322 2234688999999999999999999998543 3789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+||||+++++|.+++.... .+++..+..++.|++.||.||| + .+++||||||+||+++.++.+||+|
T Consensus 76 lv~ey~~~~~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~d 143 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG---------RIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCD 143 (308)
T ss_pred EEeeccCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEcc
Confidence 9999999999999997653 3557888999999999999999 6 5899999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
||++....... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...
T Consensus 144 fg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~ 201 (308)
T cd06615 144 FGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201 (308)
T ss_pred CCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc
Confidence 99987553221 22346899999999998888999999999999999999999999653
No 212
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6e-40 Score=303.91 Aligned_cols=247 Identities=27% Similarity=0.386 Sum_probs=192.5
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecC
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMP 229 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 229 (473)
++||+|+||.||+|...+++.+|+|.++..... ....+.+|+.++..++||||+++++++... ...++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEECCC
Confidence 368999999999999778899999998643322 234688999999999999999999998543 35799999999
Q ss_pred CCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccC
Q 012014 230 NGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309 (473)
Q Consensus 230 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 309 (473)
+++|.+++..... .+.+..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~L~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 76 GGDFLSFLRKKKD--------ELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQED 144 (250)
T ss_pred CCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecc
Confidence 9999999865432 2558889999999999999999 9999999999999999999999999999987543
Q ss_pred ccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... .......++..|+|||++.+..++.++||||||+++|++++ |..||.+..... ......... ..
T Consensus 145 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----~~~~~~~~~-----~~ 213 (250)
T cd05085 145 DGIY-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-----AREQVEKGY-----RM 213 (250)
T ss_pred cccc-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCC-----CC
Confidence 2211 11112234677999999988889999999999999999998 999997532111 000000000 00
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
..+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 214 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 --------------------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001124567889999999999999999999998875
No 213
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.7e-40 Score=314.88 Aligned_cols=289 Identities=19% Similarity=0.263 Sum_probs=203.2
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
-++|.+.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++... ...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC-----CeE
Confidence 35789999999999999999984 468899999987433 22345678999999999999999999998543 368
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||++ ++|.+++..... .+++..+..++.|++.||.||| +++|+|+||||+||+++.++.+||+|
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~--------~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~d 147 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCGN--------SINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLAD 147 (301)
T ss_pred EEEEeccc-cCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECc
Confidence 99999996 699998865432 2557889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
||++....... .......+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+....+ .+..... ....
T Consensus 148 fg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~-~~~~~~~-~~~~ 223 (301)
T cd07873 148 FGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE-QLHFIFR-ILGT 223 (301)
T ss_pred CcchhccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HcCC
Confidence 99997543221 112233468899999987654 47889999999999999999999997643211 1111111 1110
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH--HHHHHHHhhcc
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES--RLRLIRRKLLE 458 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~l~~~~~~ 458 (473)
............. ....... +..............+..+.+|+.+||+.||.+|||+.|+++ .++.+.+.+..
T Consensus 224 ~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~~ 298 (301)
T cd07873 224 PTEETWPGILSNE----EFKSYNY-PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHK 298 (301)
T ss_pred CChhhchhhhccc----ccccccc-CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhhc
Confidence 0000000000000 0000000 000000001111234567889999999999999999999987 56555555443
No 214
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.7e-40 Score=308.69 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=193.0
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.++||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.++.+++||||+++++.|... ...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEE
Confidence 367888999999999999998 4678999999986432 22335688999999999999999999998653 3678
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|..+. .+++..+..++.|++.||.||| +++|+|+||||+||+++.++.++|+||
T Consensus 76 lv~e~~~~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~df 139 (279)
T cd06619 76 ICTEFMDGGSLDVYR-------------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDF 139 (279)
T ss_pred EEEecCCCCChHHhh-------------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeC
Confidence 999999999997652 1346778899999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccH--HHHHHhhcCc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNL--RNFVKMALPQ 380 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~--~~~~~~~~~~ 380 (473)
|++...... ......||..|+|||++.+..++.++||||||+++|+|++|..||.......... ..........
T Consensus 140 g~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 215 (279)
T cd06619 140 GVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE 215 (279)
T ss_pred Ccceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc
Confidence 999765332 1223468999999999998889999999999999999999999997643221110 0000000000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
..... .....+.++.+++.+||+.||++||++.|+++.
T Consensus 216 ~~~~~------------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 216 DPPVL------------------------------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCC------------------------------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000 001134567899999999999999999998764
No 215
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2e-40 Score=319.59 Aligned_cols=201 Identities=25% Similarity=0.309 Sum_probs=168.4
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+++ ..+++.||+|+++.. .......+.+|+.++..++|+||++++++|.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 478999999999999999999 456899999998742 22234568899999999999999999998754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++..... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~ 144 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED--------RLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLA 144 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEE
Confidence 8999999999999999975321 3568889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC-----CCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-----CEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
|||++........ .......||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+
T Consensus 145 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 145 DFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ECCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 9999876543221 11223458999999999863 4578899999999999999999999975
No 216
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.9e-40 Score=307.90 Aligned_cols=257 Identities=22% Similarity=0.374 Sum_probs=200.4
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCC----EEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGT----TIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|.+.+.||+|+||.||+|... ++. .+|+|.+..... .....+.+|+.++.+++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 56888999999999999999843 333 589998764432 234578899999999999999999999854
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++|+|.+++..... .+++..+..++.|++.||+||| +++++||||||+||+++.++.+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD--------NIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEE
Confidence 357899999999999999976532 2568899999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++...............++..|+|||.+....++.++||||||+++||+++ |..||.+....+ +...+...
T Consensus 150 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~ 227 (279)
T cd05057 150 ITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--IPDLLEKG 227 (279)
T ss_pred ECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhCC
Confidence 999999987653322211122224568999999988889999999999999999998 999997642211 11111100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
... ..+..+...+.+++.+||..||.+|||+.++++.|+.+..
T Consensus 228 ~~~----------------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 228 ERL----------------------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCC----------------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000 0011133467889999999999999999999999998854
No 217
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9.9e-40 Score=305.54 Aligned_cols=249 Identities=23% Similarity=0.312 Sum_probs=196.1
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCc---------hhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGS---------KSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
+|.+...||+|+||.||+|.. .+++.+|+|.+........ +.+.+|+.++++++||||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 477888999999999999984 5688999998875433222 4578899999999999999999997543
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
...+++|||+++++|.+++.... .+++..+..++.|++.||.||| +++++||||+|+||++++++
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~ 143 (267)
T cd06628 79 ---DHLNIFLEYVPGGSVAALLNNYG---------AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKG 143 (267)
T ss_pred ---CccEEEEEecCCCCHHHHHHhcc---------CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCC
Confidence 36799999999999999997653 3557888899999999999999 89999999999999999999
Q ss_pred cEEEeecccccccCccccc----cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHH
Q 012014 296 IGHVGDFGMARFLPAIDKQ----NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLR 371 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~ 371 (473)
.+||+|||+++........ .......|+..|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---- 219 (267)
T cd06628 144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ---- 219 (267)
T ss_pred CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----
Confidence 9999999999876432111 11123458899999999998889999999999999999999999997532111
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....... .. .+..+...+..+.+++.+||+.||.+||++.||++
T Consensus 220 ~~~~~~~------~~--------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 220 AIFKIGE------NA--------------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHHhc------cC--------------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1100000 00 00011234567889999999999999999999875
No 218
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.1e-40 Score=306.62 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=189.9
Q ss_pred ceeecCCCeEEEEEEec----CCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|... ++..+|+|.+.... ......+.+|+.+++.++||||+++++++... ....+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 46899999999999843 23579999875322 22345788899999999999999999977432 23568999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++..... ..++.....++.|++.||.||| +.+++||||||+|||+++++.+||+|||++
T Consensus 77 e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~ 145 (262)
T cd05058 77 PYMKHGDLRNFIRSETH--------NPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLA 145 (262)
T ss_pred ecCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCcccc
Confidence 99999999999975432 1346677889999999999999 999999999999999999999999999999
Q ss_pred cccCcccc--ccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhC-CCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 306 RFLPAIDK--QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG-IRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 306 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
+....... ........++..|+|||.+.+..++.++||||||+++|||++| .+||...... ...........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-----~~~~~~~~~~~ 220 (262)
T cd05058 146 RDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-----DITVYLLQGRR 220 (262)
T ss_pred ccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHhcCCC
Confidence 75532211 1111223457789999999888899999999999999999995 5566532111 11100000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
...+...+..+.+++..||+.+|++|||+.||++.|+.+..
T Consensus 221 -------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 -------------------------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -------------------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00011234578899999999999999999999999998753
No 219
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.7e-40 Score=308.13 Aligned_cols=255 Identities=21% Similarity=0.277 Sum_probs=184.3
Q ss_pred ceeecCCCeEEEEEEecC---CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 151 NLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
+.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+.+++.++||||+++++.+.+. ...++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEEE
Confidence 358999999999997433 34678887653322 2234678999999999999999999987543 36799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|+++|+|.+++........ ..+++.....++.||+.||.||| +++|+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~~~g~L~~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVA----QMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred eCCCCcHHHHHHhcccccc----ccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEecccccc
Confidence 9999999999976543211 12346778899999999999999 9999999999999999999999999999987
Q ss_pred ccCccccccceeeccCCCCcCCCccccC-------CCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 307 FLPAIDKQNRFICIKGSTGYIPPEYDLG-------CEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
...............++..|+|||++.. ..++.++|||||||++|||++ |..||......+ .+.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~- 226 (269)
T cd05042 149 EQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ- 226 (269)
T ss_pred ccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc-
Confidence 5432221111223345778999998643 356889999999999999999 788886532211 111111100
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
...+..+ ......+..+.+++..|| .||++|||++||++.|
T Consensus 227 ---~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 227 ---DIKLPKP--------------------------QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ---CccCCCC--------------------------cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 0000000 001124456677888898 5999999999999887
No 220
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.1e-40 Score=306.47 Aligned_cols=240 Identities=21% Similarity=0.277 Sum_probs=183.6
Q ss_pred ceeecCCCeEEEEEEecC-------------CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 151 NLIGAGNFGSVYNGTLFD-------------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
+.||+|+||.||+|.+.. ...|++|.+..........+.+|+.++..++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~---- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD---- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 368999999999998432 235888987654444455788899999999999999999998543
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc-
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI- 296 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~- 296 (473)
...+++|||+++|+|..++..... .+++..++.++.||+.||.||| +++|+||||||+|||++.++.
T Consensus 77 -~~~~lv~e~~~~~~l~~~~~~~~~--------~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~ 144 (262)
T cd05077 77 -VENIMVEEFVEFGPLDLFMHRKSD--------VLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGID 144 (262)
T ss_pred -CCCEEEEecccCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCcc
Confidence 356899999999999998875432 3568889999999999999999 999999999999999987654
Q ss_pred ------EEEeecccccccCccccccceeeccCCCCcCCCcccc-CCCCCcccchhhHhHHHHHHH-hCCCCCCCCCCCcc
Q 012014 297 ------GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-GCEASTYGDVYSFGILLLEMF-TGIRPSDGIFTGKM 368 (473)
Q Consensus 297 ------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell-tg~~P~~~~~~~~~ 368 (473)
+|++|||++...... ....|+..|+|||.+. +..++.++|||||||++|||+ +|..||.......
T Consensus 145 ~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~- 217 (262)
T cd05077 145 GECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE- 217 (262)
T ss_pred CCCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-
Confidence 899999998754321 1234788999999886 456899999999999999998 5888876421110
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...+.. .. ... .......+.+|+.+||+.||.+||++.+|++.
T Consensus 218 -~~~~~~----~~-~~~-------------------------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 218 -KERFYE----GQ-CML-------------------------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -HHHHHh----cC-ccC-------------------------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 000000 00 000 00123567899999999999999999999887
Q ss_pred HH
Q 012014 449 LR 450 (473)
Q Consensus 449 L~ 450 (473)
|+
T Consensus 261 ~~ 262 (262)
T cd05077 261 IN 262 (262)
T ss_pred cC
Confidence 63
No 221
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.1e-39 Score=304.13 Aligned_cols=255 Identities=23% Similarity=0.372 Sum_probs=200.7
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
...+|.+.+.||+|+||.||++...++..+|+|.+.... .....+.+|+.+++.++|+||+++++.+.. ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 346789999999999999999987777889999876432 234678899999999999999999998743 3569
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+||
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGS-------KQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCcc-------ccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCC
Confidence 999999999999999764322 3557888999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|.+....... ........++..|+|||++....++.++|+||||+++|++++ |..||.+..... +.........
T Consensus 147 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~-- 221 (260)
T cd05073 147 GLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYR-- 221 (260)
T ss_pred cceeeccCCC-cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhCCCC--
Confidence 9997654322 111122335678999999988889999999999999999999 999997532211 0110000000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
. +.....+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 222 -~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 -M-------------------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -C-------------------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 0011245678899999999999999999999999875
No 222
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-40 Score=309.69 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=198.5
Q ss_pred cCCCCccceeecCCCeEEEEEEec-C---CCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF-D---GTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..+|++.+.||+|+||.||+|... + +..+|+|.++.... .....+.+|+.++.+++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----S 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 357888999999999999999842 2 33789998864321 224578899999999999999999999754 2
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++++|.+++..... .+++.++..++.|++.||.||| +++++||||||+||+++.++.++
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHDG--------QFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEE
Confidence 367999999999999999976532 2568889999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccc-eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 299 VGDFGMARFLPAIDKQNR-FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
|+|||++........... .....++..|+|||.+.+..++.++||||||+++|++++ |..||......+ ....+..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~~ 224 (267)
T cd05066 147 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAIEE 224 (267)
T ss_pred eCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHHhC
Confidence 999999987644321111 111223567999999998889999999999999999887 999987532211 0000000
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
... .+.....+..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 225 ~~~----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 225 GYR----------------------------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCc----------------------------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 000112356788999999999999999999999999875
No 223
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.7e-40 Score=309.35 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=193.9
Q ss_pred CCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCch--hHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|++.+.||+|+||.||++.. .+++.+|+|++......... ...+|+.++.+++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 56788999999999999994 45678999999854432222 23459999999999999999999865 346789
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++++|.+++.... .+++..+..++.|++.||.+|| +++++|+||||+||+++.++.++|+|||
T Consensus 76 v~~~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg 143 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK---------PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFG 143 (260)
T ss_dssp EEEEETTEBHHHHHHHHS---------SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGT
T ss_pred cccccccccccccccccc---------cccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 999999999999998322 3668999999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCcccc-CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDL-GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
.+..... .........++..|+|||++. +..++.++||||+|+++|+|++|..||......+ .............
T Consensus 144 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~--~~~~~~~~~~~~~ 219 (260)
T PF00069_consen 144 SSVKLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD--QLEIIEKILKRPL 219 (260)
T ss_dssp TTEESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH--HHHHHHHHHHTHH
T ss_pred ccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccchh--hhhhhhhcccccc
Confidence 9975411 122334456899999999998 7889999999999999999999999998641000 0000000000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... .........+.+++.+||+.||++|||+.++++
T Consensus 220 ~~~~----------------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 220 PSSS----------------------------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHT----------------------------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccc----------------------------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 000011368899999999999999999999874
No 224
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-39 Score=308.03 Aligned_cols=277 Identities=19% Similarity=0.220 Sum_probs=196.0
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++..++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 478889999999999999984 4689999999864322 234568899999999999999999999854 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||++ ++|.+++...... ..+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+||
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~df 145 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKG------QYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADF 145 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCC------CcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcc
Confidence 9999996 6899988654321 13668899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++....... .......+++.|+|||++.+. .++.++||||||+++|+|++|+.||.+...... ............
T Consensus 146 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~ 222 (285)
T cd07861 146 GLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPT 222 (285)
T ss_pred cceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCC
Confidence 9997653321 112233468899999988654 478899999999999999999999976432211 111111110000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....-.......+.. .... .............+.++.+++.+||+.||++|||+.+|++
T Consensus 223 ~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 223 EDVWPGVTSLPDYKN------TFPK-WKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhhhcchhhHHHHh------hccc-cCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000000 0000 0000000111224667889999999999999999999875
No 225
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.6e-40 Score=305.41 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=195.2
Q ss_pred ceeecCCCeEEEEEEecC--C--CEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTLFD--G--TTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|+.++++++||||+++++.+.+ ...+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999998533 3 3689999876544 445678999999999999999999998754 4679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++...... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.+||+|||++
T Consensus 75 e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~ 144 (257)
T cd05040 75 ELAPLGSLLDRLRKDALG-------HFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLM 144 (257)
T ss_pred EecCCCcHHHHHHhcccc-------cCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecccccc
Confidence 999999999999765421 3568899999999999999999 999999999999999999999999999999
Q ss_pred cccCccccc-cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 306 RFLPAIDKQ-NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 306 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+.+...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||......+. .... .. ...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~-~~--~~~-- 218 (257)
T cd05040 145 RALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-LKKI-DK--EGE-- 218 (257)
T ss_pred ccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH-Hh--cCC--
Confidence 876542211 11123446788999999998889999999999999999999 9999965322110 0000 00 000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
. ...+...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 219 ~-----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 R-----------------------------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred c-----------------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 0001124567889999999999999999999999875
No 226
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.1e-39 Score=305.68 Aligned_cols=256 Identities=23% Similarity=0.355 Sum_probs=192.4
Q ss_pred ceeecCCCeEEEEEEec-CCC--EEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTLF-DGT--TIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
++||+|+||.||+|... ++. .+++|.++... ......+.+|+.++.++ +||||+++++++... ...+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 36899999999999853 444 46888876432 23345788999999999 799999999998543 3579999
Q ss_pred EecCCCCHHHHhcCCCCCCCC-------CcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 226 KFMPNGSLEEWLRGKDDTNWR-------PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
||+++|+|.+++......... .....+++.++..++.|++.||+||| +++++||||||+||+++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEE
Confidence 999999999999765321110 01123678899999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++...... ........+..|+|||++.+..++.++||||||+++|||++ |..||.+.... ......
T Consensus 153 l~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~ 224 (270)
T cd05047 153 IADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKL 224 (270)
T ss_pred ECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHH
Confidence 9999998632211 11111224567999999988889999999999999999997 99999653211 111110
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
...... ..+...+..+.+|+.+||+.||.+|||+.+++..|+.+.
T Consensus 225 ~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQGYRL-------------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCCCCC-------------------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000000 001123457889999999999999999999999998874
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.1e-40 Score=310.04 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=193.0
Q ss_pred CCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
|++.+.||+|+||.||+|.. .++..+++|.+..........+.+|+.+++.++||||+++++++... ...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEEEE
Confidence 56788899999999999994 45788899988654444456788999999999999999999998543 3679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++++|..++..... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 82 e~~~~~~l~~~~~~~~~--------~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 150 (282)
T cd06643 82 EFCAGGAVDAVMLELER--------PLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVS 150 (282)
T ss_pred EecCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccc
Confidence 99999999998765321 3568899999999999999999 899999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
....... .......|+..|+|||++. +..++.++|||||||++|+|++|..||........ ........
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~--- 224 (282)
T cd06643 151 AKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSE--- 224 (282)
T ss_pred ccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHHHhhcC---
Confidence 7653321 1222345899999999874 34578899999999999999999999975322110 00000000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... .+...+..+.+++.+||+.||.+|||+.++++
T Consensus 225 -~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 225 -PPTLA-----------------------------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -CCCCC-----------------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 01123457889999999999999999998864
No 228
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.6e-39 Score=302.40 Aligned_cols=250 Identities=23% Similarity=0.317 Sum_probs=197.3
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|++|.||++. ..+++.||+|.+..... ...+.+.+|+.++++++|||++++++.+.. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 48889999999999999998 45678999999864332 234568899999999999999999987642 233579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++.++..++.|++.||.+|| +++++||||||+||+++.++.++|+||
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~-------~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df 146 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGK-------LLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDL 146 (257)
T ss_pred EEecccCCCcHHHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecc
Confidence 999999999999999764321 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++....... .......|++.|+|||++.+..++.++||||||+++|+|++|..||..... ............
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~ 219 (257)
T cd08223 147 GIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKL 219 (257)
T ss_pred cceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCC
Confidence 9998664322 222334589999999999998899999999999999999999999874321 111111100000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 220 ~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 P-------------------------------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred C-------------------------------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 001134567889999999999999999999975
No 229
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.4e-40 Score=308.89 Aligned_cols=238 Identities=21% Similarity=0.260 Sum_probs=181.3
Q ss_pred eeecCCCeEEEEEEecC-------------------------CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceee
Q 012014 152 LIGAGNFGSVYNGTLFD-------------------------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 206 (473)
.||+|+||.||+|.+.. ...|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997321 13588898864433334568889999999999999999
Q ss_pred eeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 012014 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKP 286 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp 286 (473)
++++... ...++||||+++|+|..++..... .+++..+..++.||+.||.||| +++|+||||||
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp 145 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKG--------RVPVAWKITVAQQLASALSYLE---DKNLVHGNVCA 145 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCc
Confidence 9998653 367999999999999999865332 2557888999999999999999 99999999999
Q ss_pred CcEEecCCc-------cEEEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHH-hCC
Q 012014 287 SNVLLDDEM-------IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMF-TGI 357 (473)
Q Consensus 287 ~Nil~~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell-tg~ 357 (473)
+||+++..+ .+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|.
T Consensus 146 ~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~ 219 (274)
T cd05076 146 KNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGE 219 (274)
T ss_pred ccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 999997643 4899999988643221 12246888999998865 56899999999999999995 699
Q ss_pred CCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCC
Q 012014 358 RPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPR 437 (473)
Q Consensus 358 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 437 (473)
.||........ ..+...... .+......+.+++.+||+.+|+
T Consensus 220 ~p~~~~~~~~~--~~~~~~~~~------------------------------------~~~~~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 220 VPLKERTPSEK--ERFYEKKHR------------------------------------LPEPSCKELATLISQCLTYEPT 261 (274)
T ss_pred CCccccChHHH--HHHHHhccC------------------------------------CCCCCChHHHHHHHHHcccChh
Confidence 99875322110 111000000 0001124678899999999999
Q ss_pred CCCChHHHHHHH
Q 012014 438 ERMKINDVESRL 449 (473)
Q Consensus 438 ~RPt~~ev~~~L 449 (473)
+|||+.+|++.|
T Consensus 262 ~Rps~~~il~~L 273 (274)
T cd05076 262 QRPSFRTILRDL 273 (274)
T ss_pred hCcCHHHHHHhh
Confidence 999999999877
No 230
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1e-39 Score=309.49 Aligned_cols=266 Identities=22% Similarity=0.243 Sum_probs=202.9
Q ss_pred hhhhhcccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccc
Q 012014 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVD 214 (473)
Q Consensus 137 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 214 (473)
+.++...+++|.+.+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +|||++++++++...+
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 455666789999999999999999999984 578999999986432 2345678899999998 8999999999987654
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
.......++||||+++++|.+++....... ..+++..+..++.|++.||.||| +++++||||||+||+++.+
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~ 164 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICG-----QRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTE 164 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCC
Confidence 333456899999999999999886432110 13568889999999999999999 8999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCC-----CCCcccchhhHhHHHHHHHhCCCCCCCCCCCccc
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-----EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMN 369 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~ 369 (473)
+.+||+|||++........ ......|+..|+|||.+... .++.++|||||||++|+|++|+.||........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~- 241 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT- 241 (291)
T ss_pred CCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-
Confidence 9999999999886543221 11234588999999987643 368899999999999999999999975322111
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+....+ .....+. ........+.+|+.+||+.||++|||+.||++
T Consensus 242 ~~~~~~----~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 242 LFKIPR----NPPPTLL-----------------------------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHhc----CCCCCCC-----------------------------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000000 0000000 01123456889999999999999999999975
No 231
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.2e-40 Score=311.12 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=199.1
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
..++|.+.+.||.|+||.||+|.. .++..+|+|.++.......+.+.+|+.++++++||||+++++.+.. ....
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-----ENKL 77 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeE
Confidence 456799999999999999999984 4689999999876554455678899999999999999999999854 3367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++++|.+++..... .+++..+..++.|++.||.||| +++|+|+||||+||+++.++.++|+|
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~--------~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d 146 (280)
T cd06611 78 WILIEFCDGGALDSIMLELER--------GLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLAD 146 (280)
T ss_pred EEEeeccCCCcHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEcc
Confidence 999999999999999876432 3668899999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||++....... .......|++.|+|||.+. +..++.++||||||+++|+|++|..||....... .....
T Consensus 147 ~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----~~~~~ 220 (280)
T cd06611 147 FGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----VLLKI 220 (280)
T ss_pred Cccchhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH----HHHHH
Confidence 99987653322 1223345899999999874 3457789999999999999999999997532211 01000
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. ......+ ..+...+..+.+++.+||+.||.+|||+.+|++.
T Consensus 221 ~-~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 221 L-KSEPPTL-----------------------------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred h-cCCCCCc-----------------------------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 0000000 0011234577889999999999999999999653
No 232
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.4e-40 Score=319.12 Aligned_cols=201 Identities=23% Similarity=0.300 Sum_probs=168.7
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.+.||+|+||.||+++ ..+++.||+|++.... ......+.+|..++..++|+||+++++++.+ ...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 478999999999999999998 4568899999986421 2233457889999999999999999999754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++..... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~--------~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~ 144 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED--------RLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLA 144 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEE
Confidence 8999999999999999976321 3557888899999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC-----CCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-----CEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 145 DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 145 DFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred eccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 9999976543221 12223569999999999875 4678899999999999999999999975
No 233
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.5e-39 Score=302.29 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=197.4
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
..+|++.+.||+|+||.||+|.+.++..+|+|.+.... .....+.+|++++++++||||+++++++... ...++
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 76 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SPICL 76 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----CceEE
Confidence 35688889999999999999987678899999886432 2346789999999999999999999987543 36799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+++++|.+++..... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.+||+|||
T Consensus 77 v~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g 145 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG--------KFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFG 145 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc--------CCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCc
Confidence 9999999999999875432 2558889999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ......... .
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~-~ 218 (256)
T cd05112 146 MTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVVETINAG-F 218 (256)
T ss_pred ceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHhCC-C
Confidence 9876533211 11112234678999999988889999999999999999998 99998753211 111111000 0
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
.... +...+..+.+|+.+||+.+|++|||+.|+++.|
T Consensus 219 -~~~~-----------------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 219 -RLYK-----------------------------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -CCCC-----------------------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0000 001245788999999999999999999999887
No 234
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9.7e-40 Score=309.73 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=196.6
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
..+.|++.++||.|+||.||+|.. .+++.+++|.+..........+.+|+.+++.++||||+++++.+... ...
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 84 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-----GKL 84 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----CeE
Confidence 346799999999999999999984 45899999998765544556788999999999999999999987542 367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++++|..++..... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~~--------~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~d 153 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELDR--------GLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLAD 153 (292)
T ss_pred EEEEecCCCCcHHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEcc
Confidence 999999999999988765432 3568899999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||++...... ........|++.|+|||++. ...++.++|||||||++|+|++|..||....... .+..+..
T Consensus 154 fg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~- 229 (292)
T cd06644 154 FGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAK- 229 (292)
T ss_pred Cccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHHhc-
Confidence 9998754322 11223345889999999984 3457889999999999999999999986532111 0011000
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....... .+...+..+.+++.+||+.||++||++.||++
T Consensus 230 ---~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 230 ---SEPPTLS-----------------------------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CCCccCC-----------------------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 01123456788999999999999999999965
No 235
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=309.62 Aligned_cols=248 Identities=19% Similarity=0.321 Sum_probs=205.2
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..=|.+.+.||+|-|+.|-+|+ ..+|..||||++.+.... ....+.+|++-|+.++|||||++|.+. ++...
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-----DTQTK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-----cccce
Confidence 3458888999999999999998 679999999999754433 345788999999999999999999995 45567
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe-cCCccEEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL-DDEMIGHV 299 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~-~~~~~~kl 299 (473)
+|||+|+-++|+|++||.++.. .+.+..+.+++.||+.|+.|+| ...+|||||||+||.+ ..-|-+||
T Consensus 92 lyLiLELGD~GDl~DyImKHe~--------Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKL 160 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEE--------GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKL 160 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhc--------cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEe
Confidence 8999999999999999988764 3668889999999999999999 9999999999999876 56689999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCC-cccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEAS-TYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
.|||++..+.+ .....+.+|+..|.|||++.+..|+ +++||||||||||.|++|+.||....+.+..
T Consensus 161 TDFGFSNkf~P---G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL--------- 228 (864)
T KOG4717|consen 161 TDFGFSNKFQP---GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL--------- 228 (864)
T ss_pred eeccccccCCC---cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh---------
Confidence 99999977654 4455677899999999999998886 5679999999999999999999876554321
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..++|-. ...+.....+..+||..||..||.+|-|.+||+.
T Consensus 229 ----TmImDCK------------------------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 229 ----TMIMDCK------------------------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ----hhhhccc------------------------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1111110 0122345667789999999999999999998864
No 236
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.4e-40 Score=317.81 Aligned_cols=278 Identities=18% Similarity=0.138 Sum_probs=193.6
Q ss_pred ccceeecC--CCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 149 SANLIGAG--NFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 149 ~~~~lg~G--~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
+.++||+| +||+||++. ..+|+.||+|+++.... .....+.+|+.+++.++||||++++++|... ...++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 45789999 788999998 56789999999875322 2234677899999999999999999998653 36799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++|+|.+++...... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.++++|||
T Consensus 77 v~e~~~~~~l~~~~~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~ 146 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMD-------GMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLR 146 (327)
T ss_pred EEeccCCCcHHHHHHhhccC-------CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccc
Confidence 99999999999999654321 3568889999999999999999 9999999999999999999999999998
Q ss_pred cccccCcccccc-----ceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 304 MARFLPAIDKQN-----RFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 304 ~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
.+.......... ......++..|+|||++.+ ..++.++|||||||++|||++|..||......... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~- 224 (327)
T cd08227 147 SNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLN- 224 (327)
T ss_pred hhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHH-HHHhc-
Confidence 754332111100 1112346778999999876 45899999999999999999999999764332211 11111
Q ss_pred hcCcchhhhccccchHH---------------HHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 377 ALPQRAEEVVDDFNLQE---------------IEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
.......+...... ...+... .............+........+.+|+.+||+.||++|||
T Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 300 (327)
T cd08227 225 ---GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTV-STPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300 (327)
T ss_pred ---CCccccccccchhhhhcccCCcccCCcCCCCccccc-CCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC
Confidence 11111111000000 0000000 0000000001111122235668899999999999999999
Q ss_pred hHHHHH
Q 012014 442 INDVES 447 (473)
Q Consensus 442 ~~ev~~ 447 (473)
++||++
T Consensus 301 ~~ell~ 306 (327)
T cd08227 301 ASTLLN 306 (327)
T ss_pred HHHHhc
Confidence 999986
No 237
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.5e-39 Score=304.08 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=193.5
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC-----CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG-----GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|...+.||+|+||.||+|.. .++..||+|.+...... ....+.+|+.+++.++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 5789999999999999999984 56899999998643221 224578899999999999999999987542 23
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++++||+++++|.+++.... .+++...+.++.|++.||.||| +.+|+||||||+||+++.++.+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~ 146 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG---------ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVK 146 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEE
Confidence 46789999999999999997643 2457888899999999999999 99999999999999999999999
Q ss_pred EeecccccccCcccc-ccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDK-QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++........ ........|+..|+|||.+.+..++.++|||||||++|+|++|..||....... ......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~ 222 (266)
T cd06651 147 LGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIA 222 (266)
T ss_pred EccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHh
Confidence 999999876533211 111223457899999999998889999999999999999999999997532111 110000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... .+..+......+.+++ +||..||++|||++||++
T Consensus 223 -~~~~------------------------------~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 223 -TQPT------------------------------NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -cCCC------------------------------CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0000 0001122344566676 788899999999999964
No 238
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.2e-40 Score=304.44 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=200.1
Q ss_pred cCCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|+..+.||+|+||.||+|... +++.+++|.+..... ...+.+|++++++++||||+++++++... ...+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcEE
Confidence 468999999999999999999954 478999999874432 67899999999999999999999998543 4689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+++||+++++|.+++..... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+||
T Consensus 75 l~~e~~~~~~L~~~l~~~~~--------~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~df 143 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITNK--------TLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADF 143 (256)
T ss_pred EEEecCCCCcHHHHHHhCcc--------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEccc
Confidence 99999999999999865432 3568899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|+..|+|||++.+..++.++||||||+++|+|++|..||........... .....
T Consensus 144 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~------~~~~~ 215 (256)
T cd06612 144 GVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM------IPNKP 215 (256)
T ss_pred ccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh------hccCC
Confidence 99986644321 22234478999999999988899999999999999999999999975322211000 00000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. ....+...+..+.+++.+||+.||++|||+.||++
T Consensus 216 ~~----------------------------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 216 PP----------------------------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CC----------------------------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 00011234567889999999999999999999975
No 239
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.9e-39 Score=301.65 Aligned_cols=250 Identities=19% Similarity=0.278 Sum_probs=199.8
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|+..++||.|+||.||.++ ..+++.+++|.+.... ......+.+|+.++++++|+||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-----NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-----CeEE
Confidence 58889999999999999998 5668999999987432 33456788999999999999999999998553 4689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++...... .+++.++..++.|++.||.||| +.+++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~ 145 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQ-------LFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDF 145 (256)
T ss_pred EEEEecCCCcHHHHHHhcccc-------CCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcC
Confidence 999999999999999765321 3568899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|++.|+|||.+.+..++.++||||||+++|+|++|..||...... ...........
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~~~ 218 (256)
T cd08221 146 GISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NLVVKIVQGNY 218 (256)
T ss_pred cceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHcCCC
Confidence 99986644321 223345899999999998888899999999999999999999999652211 11111111100
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.. .....+..+.+++.+||+.||.+|||+.++++.
T Consensus 219 ~~-------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 219 TP-------------------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CC-------------------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 00 012245678899999999999999999999875
No 240
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.5e-39 Score=301.44 Aligned_cols=248 Identities=27% Similarity=0.388 Sum_probs=193.7
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecC
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMP 229 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 229 (473)
++||+|+||.||++...+++.||+|.++..... ....+.+|++++++++||||+++++++.+. ...++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-----QPIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----CCeEEEEEcCC
Confidence 469999999999999666999999998754433 345789999999999999999999987543 36799999999
Q ss_pred CCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccC
Q 012014 230 NGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309 (473)
Q Consensus 230 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 309 (473)
+++|.+++..... .+++..+..++.+++.||.||| +++++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~l~~~l~~~~~--------~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 76 GGSLLTFLRKKKN--------RLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred CCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 9999999965432 2457888999999999999999 9999999999999999999999999999997654
Q ss_pred ccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
............++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ..........
T Consensus 145 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~~~~~~~--------- 213 (251)
T cd05041 145 GGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRERIESGYR--------- 213 (251)
T ss_pred CCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHHHhcCCC---------
Confidence 2211111111223567999999988889999999999999999999 888886542211 0110000000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
...+...+..+.+++.+||+.+|.+|||+.||++.|+
T Consensus 214 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 214 -------------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -------------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0001124567889999999999999999999999886
No 241
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.8e-40 Score=319.51 Aligned_cols=191 Identities=22% Similarity=0.330 Sum_probs=160.3
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..+|.+.+.||+|+||.||+|.. .+++.||+|+.. ......|+.++++++||||+++++++... ...+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 133 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ------KGTTLIEAMLLQNVNHPSVIRMKDTLVSG-----AITC 133 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCC------ccccHHHHHHHHhCCCCCCcChhheEEeC-----CeeE
Confidence 35799999999999999999994 457889999743 22346799999999999999999998653 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|||++ .++|.+++..... .+++..+..|+.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 134 lv~e~~-~~~l~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~Df 201 (357)
T PHA03209 134 MVLPHY-SSDLYTYLTKRSR--------PLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDL 201 (357)
T ss_pred EEEEcc-CCcHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecC
Confidence 999999 5689998865432 3668899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~ 360 (473)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 202 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 202 GAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 999753221 1223456899999999999989999999999999999999865554
No 242
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=322.98 Aligned_cols=252 Identities=20% Similarity=0.255 Sum_probs=199.7
Q ss_pred cCCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.+.|.++..||.|+||.||+|... ++-..|-|++........+.+.-|+.||..++||+||++++.|.. .+.+|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-----enkLw 105 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-----ENKLW 105 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-----cCceE
Confidence 345778888999999999999844 344557788877777778889999999999999999999998753 23679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++.|||.||-.+..+-.-+. .+.+.++.-+++|++.||.||| +++|||||||..|||++-+|.++|+||
T Consensus 106 iliEFC~GGAVDaimlEL~r--------~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADF 174 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGR--------VLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADF 174 (1187)
T ss_pred EEEeecCCchHhHHHHHhcc--------ccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecc
Confidence 99999999999988866543 4778999999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccc-----cCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYD-----LGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|.+..... ......++.|||+|||||+. ...+|+.++||||||++|.||..+.+|....... +-+++..
T Consensus 175 GVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM----RVllKia 248 (1187)
T KOG0579|consen 175 GVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIA 248 (1187)
T ss_pred cccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH----HHHHHHh
Confidence 99865422 23344567899999999974 4568999999999999999999999997653221 1111111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ....-++.+ ..-...+.+++.+||..||..||++.++++
T Consensus 249 K-SePPTLlqP-----------------------------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 249 K-SEPPTLLQP-----------------------------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred h-cCCCcccCc-----------------------------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1 111111111 122446788999999999999999999875
No 243
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.6e-40 Score=309.64 Aligned_cols=276 Identities=17% Similarity=0.231 Sum_probs=195.8
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|+..+.||+|+||.||+|.. .+|+.||+|.++... ......+.+|+.++++++||||+++++++.+ ....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-----DKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-----CCceE
Confidence 478889999999999999994 578999999987432 2233567889999999999999999999754 34689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+++||++ ++|.+++..... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+||
T Consensus 76 lv~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~df 143 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG--------DIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADF 143 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECcc
Confidence 9999996 588888765321 3568899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|+++...... .......+++.|+|||++.+. .++.++|||||||++|+|++|..||....+....+....+......
T Consensus 144 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07839 144 GLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 221 (284)
T ss_pred chhhccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 9998654322 112234578899999998764 4789999999999999999999886543322222222111111100
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... ........ ..............+.....+..+.+|+.+||+.||.+|||+.|+++
T Consensus 222 ~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 222 EESW------PGVSKLPD-YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hHHh------HHhhhccc-ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 00000000 00000000000011122235678889999999999999999999875
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-40 Score=310.10 Aligned_cols=264 Identities=23% Similarity=0.256 Sum_probs=201.3
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||+|+||+||++.. .+++.||+|++.... ....+.+.+|++++..++||||+++++++... ...+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEEE
Confidence 5788899999999999999984 468899999886433 23356788999999999999999999998653 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+||||+++++|.+++.... .+++..+..++.+++.||.||| + ++++||||||+||++++++.++|+|
T Consensus 80 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~d 147 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGG---------PIPVEILGKIAVAVVEGLTYLY---NVHRIMHRDIKPSNILVNSRGQIKLCD 147 (284)
T ss_pred EEEecCCCCCHHHHHHhcc---------CCCHHHHHHHHHHHHHHHHHHH---HhcCeeccCCCHHHEEECCCCcEEEcc
Confidence 9999999999999987643 3558889999999999999999 5 5899999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... .....|+..|+|||++.+..++.++|||||||++|+|++|..||.......... ..+..
T Consensus 148 ~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~------~~~~~ 217 (284)
T cd06620 148 FGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ------DDPMG 217 (284)
T ss_pred CCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh------hhhhH
Confidence 99986542211 123458999999999988889999999999999999999999998643321100 00000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
..+....... +... . . ....++..+.+|+.+||+.||++|||+.||++..--++
T Consensus 218 ~~~~~~~~~~-----------~~~~-~---~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 218 ILDLLQQIVQ-----------EPPP-R---L---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHhh-----------ccCC-C---C---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0000000000 0000 0 0 00125567889999999999999999999988654443
No 245
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=320.42 Aligned_cols=245 Identities=21% Similarity=0.273 Sum_probs=193.6
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..|...+.||.|+||.||.|+ ..+.+.||||+++-.... ....+.+|+..|.+++|||++.+-|+|... ..
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~T 100 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HT 100 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----ch
Confidence 347778899999999999999 667899999999743332 234688999999999999999999998542 35
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.||||||| -|+-.|++.-+.. .+.+-++..|+.+.+.||+||| +.+.||||||..|||+++.|.|||+
T Consensus 101 aWLVMEYC-lGSAsDlleVhkK--------plqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLa 168 (948)
T KOG0577|consen 101 AWLVMEYC-LGSASDLLEVHKK--------PLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLA 168 (948)
T ss_pred HHHHHHHH-hccHHHHHHHHhc--------cchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeec
Confidence 69999999 6688887755432 3557889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||.|....+ ..+++|||.|||||++. .+.|+-++||||||++..||...++|+..+.... .+..+....
T Consensus 169 DFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNe 241 (948)
T KOG0577|consen 169 DFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE 241 (948)
T ss_pred cccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcC
Confidence 9999976533 23567999999999875 4679999999999999999999999976532111 011111111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.| .+. + .+-...+++++..||++-|.+|||..+++.
T Consensus 242 sP-----tLq-----------------------s------~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 242 SP-----TLQ-----------------------S------NEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CC-----CCC-----------------------C------chhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11 111 1 123557889999999999999999998865
No 246
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.5e-41 Score=321.70 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=196.4
Q ss_pred CccceeecCCCeEEEEEE-ecCCCEEEEEEee----ccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 148 SSANLIGAGNFGSVYNGT-LFDGTTIAVKVFN----LIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+...+||+|+|-+||+|. ..+|..||=-.++ ...+...++|..|+.+|+.|+||||+++|.++.+.. .....
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence 445679999999999998 3456666532222 123344578999999999999999999999988754 35678
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~kl~D 301 (473)
+|+|++..|+|..|+++.+. ...+....|++||++||.|||++ ..+|||||||-+||||+. .|.|||+|
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~~---------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHRR---------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred eeeecccCCcHHHHHHHhcc---------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecc
Confidence 99999999999999998874 44778899999999999999977 789999999999999975 48999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
+|+|+.... .......|||.|||||+.. ..|+..+||||||++++||+|+.+||..-.+....++.......|..
T Consensus 190 LGLAtl~r~----s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 190 LGLATLLRK----SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA 264 (632)
T ss_pred hhHHHHhhc----cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH
Confidence 999987643 2233467999999999988 58999999999999999999999999754333333333333333333
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+..+-| +++.++|.+||.. .++|||+.|++.
T Consensus 265 l~kV~d----------------------------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 265 LSKVKD----------------------------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhccCC----------------------------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 333332 3677899999999 999999999874
No 247
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.8e-40 Score=317.23 Aligned_cols=202 Identities=23% Similarity=0.287 Sum_probs=167.8
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.++||+|+||.||+++. .+++.+|+|++... .......+.+|+.++..++|+||+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 4788999999999999999984 45788999998632 12233457889999999999999999998754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++|+|.+++..... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~--------~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~ 144 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED--------RLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLA 144 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEe
Confidence 8999999999999999976322 3567888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|||++....... ........||+.|+|||++. ...++.++|||||||++|||++|..||...
T Consensus 145 DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 145 DFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred ecchheecccCC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 999987653322 11222346999999999986 345889999999999999999999999753
No 248
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.4e-39 Score=305.48 Aligned_cols=254 Identities=25% Similarity=0.371 Sum_probs=194.4
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC----------CchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG----------GSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
+|...+.||+|+||.||+|. ..+++.+|+|.++..... ..+.+.+|+.++..++||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 47788999999999999998 456899999988632111 123577899999999999999999987543
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
...++||||+++++|.+++.... .+++..+..++.|++.||.||| +++++||||+|+||+++.+
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~ 144 (272)
T cd06629 81 ----EYLSIFLEYVPGGSIGSCLRTYG---------RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDAD 144 (272)
T ss_pred ----CceEEEEecCCCCcHHHHHhhcc---------CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCC
Confidence 46799999999999999997653 3557888899999999999999 8999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCC--CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE--ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~ 372 (473)
+.++|+|||+++...............|+..|+|||.+.... ++.++|+||||+++|++++|..||...... ..
T Consensus 145 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~ 220 (272)
T cd06629 145 GICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----AA 220 (272)
T ss_pred CeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----HH
Confidence 999999999997654322222223445889999999987654 789999999999999999999998642111 11
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... ......... .......+..+.+++.+||+.||++|||+.+|++
T Consensus 221 ~~~~~-~~~~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 221 MFKLG-NKRSAPPIP--------------------------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHhh-ccccCCcCC--------------------------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 10000 000000000 0011234678889999999999999999999875
No 249
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-39 Score=307.67 Aligned_cols=264 Identities=20% Similarity=0.269 Sum_probs=201.5
Q ss_pred chhhhhcccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecc
Q 012014 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGV 213 (473)
Q Consensus 136 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 213 (473)
...++....+.|++.+.||.|+||.||+|.. .+++.+|+|++.... .....+..|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 3445556678899999999999999999994 568899999986432 2345688899999998 799999999998643
Q ss_pred cc-CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 214 DY-QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 214 ~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
.. ......+++|||+++|+|.+++...... .+++..+..++.||+.||.||| +++|+|+||||+||+++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~ 155 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN-------ALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLT 155 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence 21 2245789999999999999999764322 2557788899999999999999 89999999999999999
Q ss_pred CCccEEEeecccccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc
Q 012014 293 DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~ 367 (473)
.++.++|+|||++....... .......|++.|+|||.+. +..++.++|||||||++|+|++|..||.......
T Consensus 156 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~ 233 (282)
T cd06636 156 ENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR 233 (282)
T ss_pred CCCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh
Confidence 99999999999987553221 1223345899999999875 3457889999999999999999999996532111
Q ss_pred ccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 368 MNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ..... ...... ......+..+.+|+.+||+.||.+|||+.||++
T Consensus 234 ~----~~~~~-~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 234 A----LFLIP-RNPPPK------------------------------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h----hhhHh-hCCCCC------------------------------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 00000 000000 000124567899999999999999999999864
No 250
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-39 Score=304.70 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=198.1
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||.|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeEE
Confidence 4688899999999999999984 468999999987543 23345688999999999999999999987543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|+||+++++|.+++... .+++..+..++.|++.||.||| +++++|+||+|+||++++++.++|+||
T Consensus 76 ~v~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG----------KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADF 142 (274)
T ss_pred EEEEeeCCCcHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccc
Confidence 999999999999999764 2558899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|+++...... .......|++.|+|||.+.+..++.++||||||+++|+|++|..||........ ........+
T Consensus 143 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~--- 215 (274)
T cd06609 143 GVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--LFLIPKNNP--- 215 (274)
T ss_pred ccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--HHHhhhcCC---
Confidence 9998765432 122334588899999999988899999999999999999999999975321110 000000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+.. ...+..+.+++.+||..||++|||++++++
T Consensus 216 ~~~~~------------------------------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 216 PSLEG------------------------------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CCCcc------------------------------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00000 014557889999999999999999999976
No 251
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.4e-40 Score=308.12 Aligned_cols=240 Identities=22% Similarity=0.314 Sum_probs=183.7
Q ss_pred ceeecCCCeEEEEEEecC--------CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 151 NLIGAGNFGSVYNGTLFD--------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.||+|+||.||+|.... ...+|+|.+........+.+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 369999999999998422 235888887654444456788999999999999999999998643 3568
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc------
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI------ 296 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~------ 296 (473)
+||||+++|+|.+++..... .+++..++.++.||+.||.||| +++|+||||||+||+++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~ 144 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN--------LINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNP 144 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCC
Confidence 99999999999999976542 2557888999999999999999 999999999999999987664
Q ss_pred --EEEeecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCC-CCCCCCCCCcccHHH
Q 012014 297 --GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGI-RPSDGIFTGKMNLRN 372 (473)
Q Consensus 297 --~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~-~P~~~~~~~~~~~~~ 372 (473)
++++|||++...... ....++..|+|||++.+. .++.++||||||+++|+|++|. .||........ ..
T Consensus 145 ~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~~ 216 (258)
T cd05078 145 PFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--LQ 216 (258)
T ss_pred ceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--HH
Confidence 699999988654321 223478899999999874 5799999999999999999985 55543211100 00
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.... .. . .+.....++.+|+.+||+.||++|||+++|++.|+
T Consensus 217 ~~~~--~~---~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 FYED--RH---Q-------------------------------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHc--cc---c-------------------------------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 00 0 00112346889999999999999999999998873
No 252
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.5e-39 Score=305.63 Aligned_cols=262 Identities=19% Similarity=0.306 Sum_probs=199.5
Q ss_pred CCCCccceeecCCCeEEEEEEec------CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
++|+....||+|+||.||+|+.. +.+.|++|.+...... ....+.+|++++++++||||+++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA---- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----
Confidence 57888999999999999999843 2467999988654332 346789999999999999999999987543
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
...++||||+++|+|.+++..............+++..+..++.|++.||.||| +++|+||||||+||+++.++.+
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 81 -EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcE
Confidence 357999999999999999976542211111113678999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
+++|||++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ....
T Consensus 157 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-----~~~~ 230 (275)
T cd05046 157 KVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-----VLNR 230 (275)
T ss_pred EEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-----HHHH
Confidence 999999987543211 111222345778999999988888999999999999999999 888986532211 1111
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
....... +.....++..+.+++.+||+.||.+|||+.|++..|.
T Consensus 231 ~~~~~~~------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLE------------------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcC------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1000000 0001124568889999999999999999999998875
No 253
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.7e-39 Score=304.91 Aligned_cols=263 Identities=22% Similarity=0.222 Sum_probs=198.4
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|...+.||.|++|.||++.. .+++.+|+|.+..... .....+.+|++++++++||||++++++|.... ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeEE
Confidence 4688899999999999999994 5688999999874332 23456889999999999999999999885432 34579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++...... ...++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+||
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~df 149 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKR-----GGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDF 149 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeec
Confidence 999999999999987542211 113567889999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++....... .....++..|+|||.+.+..++.++||||||+++|+|++|..||......................
T Consensus 150 g~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd06621 150 GVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN 225 (287)
T ss_pred cccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc
Confidence 9987543221 112347889999999998889999999999999999999999997643211111111111000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+.+. .......++.+.+++.+||+.||.+|||+.||++
T Consensus 226 ~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 PELKDE-------------------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhhccC-------------------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000000 0000123567889999999999999999999987
No 254
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-39 Score=305.96 Aligned_cols=264 Identities=23% Similarity=0.382 Sum_probs=198.6
Q ss_pred CCccceeecCCCeEEEEEEec----CCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC-ce
Q 012014 147 FSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG-AR 219 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 219 (473)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999742 36889999986432 223456889999999999999999999876533221 12
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++++|+.+|+|.+++....... ....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl 154 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGE---EPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCV 154 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEE
Confidence 3578999999999998875432111 0123668889999999999999999 899999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++...............+++.|++||.+.+..++.++||||||+++|+|++ |..||.+..... +.......
T Consensus 155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~- 231 (273)
T cd05074 155 ADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--IYNYLIKG- 231 (273)
T ss_pred CcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--HHHHHHcC-
Confidence 99999986543221112222335678999999988889999999999999999999 889987532211 11111000
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
... ......+..+.+++.+||+.+|++|||+.||++.|+++
T Consensus 232 -~~~--------------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 -NRL--------------------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -CcC--------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 00012456788999999999999999999999999876
No 255
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.8e-39 Score=301.50 Aligned_cols=247 Identities=24% Similarity=0.390 Sum_probs=195.5
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
++|.+.+.||+|+||.||++. .+++.||+|.++.. .....+.+|+.++.+++||||+++++++... ..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE-YTGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN------GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc-cCCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------CcEEE
Confidence 568899999999999999997 47788999998642 2346789999999999999999999987532 35899
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++++|.+++...... .+++..++.++.|++.||.||| ++|++||||||+||+++.++.+||+|||+
T Consensus 77 ~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~ 146 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRA-------LVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGL 146 (254)
T ss_pred EECCCCCCHHHHHHhcCcC-------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCcc
Confidence 9999999999999765321 3558888999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+....... .....+..|+|||.+.+..++.++|+||||+++|+|++ |..||...... .........
T Consensus 147 ~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~--- 213 (254)
T cd05083 147 ARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVKECVEKG--- 213 (254)
T ss_pred ceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHhCC---
Confidence 87543211 11224567999999988889999999999999999998 99998753211 111000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRL 451 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 451 (473)
... ......+..+.+++.+||+.+|++|||+++|++.|+.
T Consensus 214 --------------~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 214 --------------YRM--------------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --------------CCC--------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 000 0011245678899999999999999999999998763
No 256
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-39 Score=315.60 Aligned_cols=283 Identities=17% Similarity=0.212 Sum_probs=202.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+++|++.++||+|+||.||+|. ..+|+.||+|.++... ......+.+|+.++++++||||+++++++..........
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 45789999999999999999998 5578999999986422 223456788999999999999999999886655555557
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++++||+. ++|.+++... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~----------~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~ 148 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQ----------HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKIC 148 (336)
T ss_pred EEEEehhcc-cCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEC
Confidence 899999995 5898888654 3668889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc-cceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 301 DFGMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 301 Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|||++......... .......||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.... ..+..+.....
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~~~~~ 227 (336)
T cd07849 149 DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLILGVLG 227 (336)
T ss_pred cccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcC
Confidence 99999765432211 11223458999999998654 46899999999999999999999999753211 11111111111
Q ss_pred ---CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 379 ---PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 379 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
++....+.+......... . ...............+..+.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIKS-------L-PFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCHHHHHHhhchhhhhHHhh-------c-CcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 011111111110000000 0 0000000001112346678999999999999999999999875
No 257
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2e-39 Score=306.70 Aligned_cols=276 Identities=20% Similarity=0.263 Sum_probs=198.3
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 46888999999999999999854 68999999986432 2234567899999999999999999999854 3467
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++++|..++.... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~d 143 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR---------GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCD 143 (286)
T ss_pred EEEEeccCccHHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECc
Confidence 99999999988888775433 3568899999999999999999 89999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC-
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP- 379 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~- 379 (473)
||++........ ......++..|+|||.+.+ ..++.++||||||+++|+|++|..||.+....+. +.........
T Consensus 144 fg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~ 220 (286)
T cd07847 144 FGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDL 220 (286)
T ss_pred cccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Confidence 999987644321 1223347889999999876 4578999999999999999999999986543221 1111110000
Q ss_pred -cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 -QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......+.... .. .. ..................+..+.+|+.+||+.||++|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~---~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 221 IPRHQQIFSTNQF---FK--GL--SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ChHHhhhcccccc---cc--cc--cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000000 00 00 000000000000111234678899999999999999999999874
No 258
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-40 Score=339.71 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=191.3
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc------
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD------ 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 214 (473)
..++|+...+||+||||.||+++ .-+|+.||||++.... ......+.+|+..+++|+|||||++|..+.+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 34678999999999999999999 5689999999997543 223456889999999999999999984432110
Q ss_pred ----------------------------------------------------------------------c---------
Q 012014 215 ----------------------------------------------------------------------Y--------- 215 (473)
Q Consensus 215 ----------------------------------------------------------------------~--------- 215 (473)
+
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred ----------------------CC-------ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHH
Q 012014 216 ----------------------QG-------ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266 (473)
Q Consensus 216 ----------------------~~-------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 266 (473)
.. ...+||-||||+..+|.+++..+.... .....++++++|++
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--------~~d~~wrLFreIlE 708 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--------QRDEAWRLFREILE 708 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--------hhHHHHHHHHHHHH
Confidence 00 135689999999988888887664211 25678899999999
Q ss_pred HHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccC----c------------cccccceeeccCCCCcCCCc
Q 012014 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----A------------IDKQNRFICIKGSTGYIPPE 330 (473)
Q Consensus 267 ~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~----~------------~~~~~~~~~~~gt~~y~aPE 330 (473)
||.|+| ++|||||||||.||+++.+..|||+|||+|+... . .......+...||.-|+|||
T Consensus 709 GLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE 785 (1351)
T KOG1035|consen 709 GLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE 785 (1351)
T ss_pred HHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence 999999 9999999999999999999999999999998621 0 01122446678999999999
Q ss_pred cccCCC---CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccC
Q 012014 331 YDLGCE---ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSS 407 (473)
Q Consensus 331 ~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
++.+.. |+.|+|+||||+|++||+. ||..... -...+.....+.++.- ..+
T Consensus 786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME----Ra~iL~~LR~g~iP~~-~~f------------------ 839 (1351)
T KOG1035|consen 786 LLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME----RASILTNLRKGSIPEP-ADF------------------ 839 (1351)
T ss_pred HhcccccccccchhhhHHHHHHHHHHhc---cCCchHH----HHHHHHhcccCCCCCC-ccc------------------
Confidence 988754 9999999999999999985 5653211 1122222212211111 000
Q ss_pred CCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 408 SGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 408 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+....=.+++.++++.||.+||||.|++.
T Consensus 840 ---------~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 840 ---------FDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ---------ccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 0112223457999999999999999999874
No 259
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=320.85 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=206.2
Q ss_pred CCCCccceeecCCCeEEEEEEec--CCC--EEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF--DGT--TIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
......++||+|.||.|++|.|. +|+ .||||.++..... ....|++|+.+|.+|+|||++++||+..+.
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------ 183 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------ 183 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------
Confidence 34566788999999999999864 344 5899999865544 678899999999999999999999998652
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
...+|||+++.|+|.+.|+..... .|.......++.|||.|+.||. ++++|||||...|+|+...-.+||
T Consensus 184 p~mMV~ELaplGSLldrLrka~~~-------~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI 253 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRKAKKA-------ILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKI 253 (1039)
T ss_pred hhhHHhhhcccchHHHHHhhcccc-------ceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeee
Confidence 468999999999999999883322 4668888899999999999999 999999999999999999999999
Q ss_pred eecccccccCcccccccee-eccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 012014 300 GDFGMARFLPAIDKQNRFI-CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~ 377 (473)
+|||+.+.++......... ...-...|.|||.+....++.+||||+|||++|||+| |..||-|....+.
T Consensus 254 ~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI--------- 324 (1039)
T KOG0199|consen 254 CDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI--------- 324 (1039)
T ss_pred ecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH---------
Confidence 9999999887654322111 1223567999999999999999999999999999999 8999987432211
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
-+.+|. + .+-..+..|++.+++++..||..+|++|||+..|.+.+-...
T Consensus 325 -----L~~iD~--------~--------------erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 325 -----LKNIDA--------G--------------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred -----HHhccc--------c--------------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 011110 0 011234568999999999999999999999999986655443
No 260
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.3e-39 Score=302.74 Aligned_cols=252 Identities=20% Similarity=0.275 Sum_probs=193.8
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--C---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--G---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
++|++.++||+|+||.||+|.. .+++.||+|.+..... . ....+.+|+.++.+++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 5789999999999999999984 5689999998863221 1 1346788999999999999999999875422 2
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...+++|||+++++|.+++.... .+++..+..++.|++.||.||| +++++|+||||+||+++.++.++
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~ 146 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG---------ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVK 146 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEE
Confidence 45789999999999999987543 2457788899999999999999 99999999999999999999999
Q ss_pred EeecccccccCcccc-ccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDK-QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||++........ ........|+..|+|||.+.+..++.++||||||+++|+|++|..||...... .......
T Consensus 147 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~ 222 (265)
T cd06652 147 LGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIA 222 (265)
T ss_pred ECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHh
Confidence 999999976533211 11122345889999999998888999999999999999999999999643111 1111000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... .+..+......+.+++.+||. +|++|||++||++
T Consensus 223 ~~~~-------------------------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 223 TQPT-------------------------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred cCCC-------------------------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0000 000112345567788999985 9999999999875
No 261
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-39 Score=307.66 Aligned_cols=263 Identities=18% Similarity=0.182 Sum_probs=185.9
Q ss_pred cCCCCccceeecCCCeEEEEEEecC----CCEEEEEEeeccCCCCc-h----------hHHHHHHHHHhcCCCCceeeee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGS-K----------SFKSECKAAINIKHRNIVRVFT 208 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-~----------~~~~E~~~l~~l~h~niv~~~~ 208 (473)
.++|.+.++||+|+||.||+|...+ +..+|+|+......... + ....+...+..+.|+||+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999998543 34566665432221110 0 1122334455678999999998
Q ss_pred eeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCc
Q 012014 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSN 288 (473)
Q Consensus 209 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 288 (473)
++.... ......+++++++ ..++.+.+.... .+++..+..++.|++.||.||| +++|+||||||+|
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~N 156 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKL-VENTKEIFKRIK---------CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPEN 156 (294)
T ss_pred eeeEec-CCceEEEEEEehh-ccCHHHHHHhhc---------cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHH
Confidence 764332 2223557888887 446777665432 1336778899999999999999 9999999999999
Q ss_pred EEecCCccEEEeecccccccCccccc-----cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 289 VLLDDEMIGHVGDFGMARFLPAIDKQ-----NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 289 il~~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
||++.++.++|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|..||.+.
T Consensus 157 ill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 157 IMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999999999999866432211 1122346999999999999999999999999999999999999999875
Q ss_pred CCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 364 FTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.............. ...+... . .....++..+.+++..||+.+|++||+++
T Consensus 237 ~~~~~~~~~~~~~~----~~~~~~~----~---------------------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~ 287 (294)
T PHA02882 237 GHNGNLIHAAKCDF----IKRLHEG----K---------------------IKIKNANKFIYDFIECVTKLSYEEKPDYD 287 (294)
T ss_pred ccchHHHHHhHHHH----HHHhhhh----h---------------------hccCCCCHHHHHHHHHHHhCCCCCCCCHH
Confidence 33221111110000 0000000 0 00123467889999999999999999999
Q ss_pred HHHHHH
Q 012014 444 DVESRL 449 (473)
Q Consensus 444 ev~~~L 449 (473)
+|.+.|
T Consensus 288 ~l~~~~ 293 (294)
T PHA02882 288 ALIKIF 293 (294)
T ss_pred HHHHhh
Confidence 998876
No 262
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.8e-40 Score=317.15 Aligned_cols=191 Identities=26% Similarity=0.283 Sum_probs=157.4
Q ss_pred eecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhc---CCCCceeeeeeeeccccCCceeeEEEE
Q 012014 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINI---KHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 153 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
||+|+||.||+|+ ..+++.||+|++..... .....+..|..++... +||||+++++++... ...++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~-----~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD-----SDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC-----CeEEEEE
Confidence 6999999999998 45689999999864221 1223455666776655 699999999987543 4689999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 76 e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a 143 (330)
T cd05586 76 DYMSGGELFWHLQKEG---------RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLS 143 (330)
T ss_pred cCCCCChHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcC
Confidence 9999999999987654 3568899999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+...... .......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+
T Consensus 144 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 144 KANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred cCCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 7543221 222345699999999998764 489999999999999999999999975
No 263
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-39 Score=308.86 Aligned_cols=249 Identities=21% Similarity=0.273 Sum_probs=194.6
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
.|.....||+|+||.||++.. .++..||||.+........+.+.+|+.++..++||||+++++.+... ...++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG-----DELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-----CeEEEE
Confidence 344456799999999999984 56899999998754444556788999999999999999999987543 467999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++++|.+++... .+++.++..++.||+.||.||| +++|+||||||+||++++++.++|+|||+
T Consensus 98 ~e~~~~~~L~~~~~~~----------~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 98 MEFLEGGALTDIVTHT----------RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred EeCCCCCcHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 9999999999988543 2457889999999999999999 89999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
+........ ......|+..|+|||.+.+..++.++||||||+++|||++|..||....... .+. ......+....
T Consensus 165 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~-~~~~~~~~~~~- 239 (292)
T cd06658 165 CAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMR-RIRDNLPPRVK- 239 (292)
T ss_pred hhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-HHHhcCCCccc-
Confidence 876543221 1223458999999999988889999999999999999999999997532110 000 00000000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.....+..+.+++.+||..||.+|||+.|+++.
T Consensus 240 -------------------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 -------------------------------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -------------------------------cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001234567889999999999999999999863
No 264
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.4e-39 Score=308.91 Aligned_cols=256 Identities=20% Similarity=0.212 Sum_probs=196.1
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.+.||+|+||.||++. ..+++.|++|.+..... .....+.+|+.++..++||||+++++.+.. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 478899999999999999998 45678999999874331 233567899999999999999999998754 347
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++++|.+++.... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~ 143 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG---------ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLT 143 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEe
Confidence 899999999999999997653 3558888899999999999999 8999999999999999999999999
Q ss_pred ecccccccCccc-------------cccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCc
Q 012014 301 DFGMARFLPAID-------------KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367 (473)
Q Consensus 301 Dfg~~~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~ 367 (473)
|||+++...... .........|+..|+|||.+.+..++.++||||||+++|+|++|..||.+....
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~- 222 (305)
T cd05609 144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE- 222 (305)
T ss_pred eCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 999986421100 000111235788999999998888999999999999999999999999753211
Q ss_pred ccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 368 MNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
............ .. ......+..+.+++.+||+.||++|||+.++.+
T Consensus 223 ----~~~~~~~~~~~~---~~--------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 269 (305)
T cd05609 223 ----ELFGQVISDDIE---WP--------------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFE 269 (305)
T ss_pred ----HHHHHHHhcccC---CC--------------------------CccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence 111110000000 00 000124567889999999999999999776666
Q ss_pred HHHH
Q 012014 448 RLRL 451 (473)
Q Consensus 448 ~L~~ 451 (473)
.|+.
T Consensus 270 ll~~ 273 (305)
T cd05609 270 VKQH 273 (305)
T ss_pred HHhC
Confidence 5554
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-39 Score=305.39 Aligned_cols=252 Identities=22% Similarity=0.247 Sum_probs=194.7
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||+|+||.||++... +++.||+|.++... ......+.+|+.++.+++||||+++++.+.. ....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeEE
Confidence 36888999999999999999954 78999999886432 2224578899999999999999999998754 34789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+||||+++++|..++...... ..+++..+..++.|++.||.||| + .+|+||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVAT------EGIPEDVLRRITYAVVKGLKFLK---EEHNIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred EEEeecCCCCHHHHHHhcccc------CCCCHHHHHHHHHHHHHHHHHHH---hcCCEeeCCCCHHHEEECCCCCEEEee
Confidence 999999999999998764211 13668899999999999999999 5 5999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCC------CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE------ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
||++..+.... .....|++.|+|||.+.+.. ++.++|||||||++|+|++|..||....... ......
T Consensus 147 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~ 220 (286)
T cd06622 147 FGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQLS 220 (286)
T ss_pred cCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHHH
Confidence 99987653221 22345788999999985543 5889999999999999999999996532111 000000
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....... ...+...+..+.+++.+||+.+|++||++.+++.
T Consensus 221 ~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 221 AIVDGDP-------------------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHhhcCC-------------------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0000000 0011235667889999999999999999999986
No 266
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6e-39 Score=300.37 Aligned_cols=254 Identities=19% Similarity=0.250 Sum_probs=182.1
Q ss_pred eeecCCCeEEEEEEecCCC---EEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEe
Q 012014 152 LIGAGNFGSVYNGTLFDGT---TIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKF 227 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 227 (473)
.||+|+||.||+|...++. .+++|.++... ....+.+.+|+.++..++||||+++++.|... ...++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEec
Confidence 5999999999999854433 45666655332 22346789999999999999999999998643 367999999
Q ss_pred cCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccc
Q 012014 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307 (473)
Q Consensus 228 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 307 (473)
+++|+|.+++....... ..+....+..++.||+.||.||| +++++||||||+|||++.++.+||+|||++..
T Consensus 77 ~~~~~L~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 77 CELGDLKSYLSQEQWHR-----RNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred CCCCcHHHHHHhhhccc-----ccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccc
Confidence 99999999997643211 12346677889999999999999 89999999999999999999999999999864
Q ss_pred cCccccccceeeccCCCCcCCCccccC-------CCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcC
Q 012014 308 LPAIDKQNRFICIKGSTGYIPPEYDLG-------CEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
..............|+..|+|||++.. ..++.++||||||+++|||++ |..||......+ .+.... .
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~----~ 223 (268)
T cd05086 149 RYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVI----K 223 (268)
T ss_pred cCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH----h
Confidence 322111112223457889999998753 245788999999999999997 577876432211 111111 1
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.....+.++.. .......+.+++..|| .+|++|||+++|++.|.
T Consensus 224 ~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 224 DQQVKLFKPQL--------------------------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred hcccccCCCcc--------------------------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11111111100 0113346778999999 68999999999988773
No 267
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-39 Score=305.35 Aligned_cols=254 Identities=28% Similarity=0.397 Sum_probs=193.4
Q ss_pred ceeecCCCeEEEEEEecC-------CCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 151 NLIGAGNFGSVYNGTLFD-------GTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.||+|+||.||+|+..+ +..+|+|.+.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCeE
Confidence 368999999999998432 2579999876432 23456788999999999999999999997543 3579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-----cE
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-----IG 297 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-----~~ 297 (473)
++|||+++++|.+++......... ...+++.+++.++.|++.||.||| +++++|+||||+||+++.++ .+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFG--PPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccC--CccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcce
Confidence 999999999999999754322111 113568899999999999999999 89999999999999999877 89
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 376 (473)
+|+|||+++...............++..|+|||++.+..++.++||||||+++|+|++ |..||......+ ....+..
T Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~ 228 (269)
T cd05044 151 KIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQHVTA 228 (269)
T ss_pred EECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHHHhc
Confidence 9999999976543222122222345788999999998899999999999999999998 999986432111 1111000
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.. ........+..+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 229 ---~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 ---GG-------------------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---CC-------------------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 00001234567889999999999999999999999886
No 268
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.3e-39 Score=302.75 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=197.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 48889999999999999998 4578999999987432 2334578899999999999999999998754 34789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++...... .+++.+++.++.|++.||.||| +++++|+||+|+||+++.++.++|+||
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~ 145 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGV-------LFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDF 145 (256)
T ss_pred EEEecCCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeec
Confidence 999999999999998754321 3558889999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|++.|+|||++.+..++.++|+||||+++|+|++|..||..... .........+..
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~ 218 (256)
T cd08218 146 GIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIRGSY 218 (256)
T ss_pred cceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhcCCC
Confidence 99976543221 11223478899999999888899999999999999999999999864211 111111110000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ..+...+..+.+++.+||+.+|.+||++.||++
T Consensus 219 ~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 P-------------------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred C-------------------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 011234567889999999999999999999986
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-40 Score=312.19 Aligned_cols=254 Identities=21% Similarity=0.257 Sum_probs=196.7
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCce
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 219 (473)
....|++.++||+||.+.||++...+.+.+|+|++... .......|.+|+..|.+| .|.+||++|+|-.. ..
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~ 433 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DG 433 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----Cc
Confidence 44569999999999999999999878889999987632 334456799999999999 59999999999654 45
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
++|+||||= ..+|..+|+...... +...+..+..|++.|+.++| .+||||.||||.|+|+- .|.+||
T Consensus 434 ~lYmvmE~G-d~DL~kiL~k~~~~~--------~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKL 500 (677)
T KOG0596|consen 434 YLYMVMECG-DIDLNKILKKKKSID--------PDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKL 500 (677)
T ss_pred eEEEEeecc-cccHHHHHHhccCCC--------chHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEe
Confidence 899999975 679999998876432 11256778899999999999 99999999999999986 478999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCC-----------CCcccchhhHhHHHHHHHhCCCCCCCCCCCcc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-----------ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM 368 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DiwSlG~il~elltg~~P~~~~~~~~~ 368 (473)
+|||+|..+......-.....+||+.||+||.+.... .+.+|||||||||||+|+.|+.||......
T Consensus 501 IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-- 578 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-- 578 (677)
T ss_pred eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH--
Confidence 9999999887766666667788999999999875432 567899999999999999999999753211
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.+. ..+.++.. ++.... .+ ...++.++|+.||..||++|||..||++
T Consensus 579 ----~aKl------~aI~~P~~------------~Iefp~-------~~--~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 579 ----IAKL------HAITDPNH------------EIEFPD-------IP--ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ----HHHH------HhhcCCCc------------cccccC-------CC--CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1111 11111100 000000 00 1123889999999999999999999975
No 270
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.2e-39 Score=302.85 Aligned_cols=253 Identities=23% Similarity=0.290 Sum_probs=198.5
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|+..+.||+|+||.||++.. .+++.+|+|.+..... .....+.+|++++++++||||+++++.+... ...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEE
Confidence 4678889999999999999984 4689999999875432 3345688999999999999999999987543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+++||+++++|.+++..... .+++..+..++.|++.||.||| + .+++|+||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d 144 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQG--------RIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCD 144 (265)
T ss_pred EEEEecCCCcHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEee
Confidence 99999999999999976531 3557888899999999999999 8 9999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||.+......... ...|+..|+|||.+.+..++.++||||||+++|+|++|..||.....................
T Consensus 145 ~g~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd06605 145 FGVSGQLVNSLAK----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP 220 (265)
T ss_pred cccchhhHHHHhh----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC
Confidence 9998765322111 155889999999999889999999999999999999999999754322111111111111000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+ .....+..+.+++.+||..||++|||+.+++.
T Consensus 221 ~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 PPRL------------------------------PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCC------------------------------ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0000 00014567889999999999999999999874
No 271
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.5e-39 Score=303.51 Aligned_cols=282 Identities=19% Similarity=0.242 Sum_probs=194.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++++|.+.+.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.+++.++|+||+++++++.. ...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-----KET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-----CCe
Confidence 46789999999999999999998 45789999999864432 223467899999999999999999999754 336
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+. ++|.+++..... .+++.++..++.|++.||.||| +++|+|+||||+||+++.++.+||+
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~ 145 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG--------GLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLA 145 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEe
Confidence 799999995 788777754321 2446778889999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+++....... ......+++.|+|||.+.+. .++.++||||||+++|+|++|..||.+.......+.........
T Consensus 146 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~ 223 (291)
T cd07870 146 DFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGV 223 (291)
T ss_pred ccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCC
Confidence 9999875433221 12233478999999998754 47889999999999999999999998654322222211111100
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ...... .+. ........ ...................+..+.+++.+|+..||++|||+.|++.
T Consensus 224 ~-~~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 224 P-TEDTWP-GVS-KLPNYKPE-WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred C-Chhhhh-hhh-hcccccch-hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 000000 000 00000000 0000000000000000112467789999999999999999999864
No 272
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.7e-39 Score=300.88 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=200.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||.|+||+||+|. ..++..+|+|++.... ......+.+|+.+++.++|+||+++++.+.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEEE
Confidence 478999999999999999998 4468899999986433 2245678999999999999999999998754 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++||++++++|.+++....... .+++..+..++.|++.||.||| +++++||||+|+||++++++.++|+||
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df 146 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPRG------GLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADF 146 (267)
T ss_pred EEEeccCCCcHHHHHHHhcccC------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccc
Confidence 9999999999999997643211 3568889999999999999999 999999999999999999999999999
Q ss_pred ccccccCcccccc--ceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQN--RFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|++..+....... ......|+..|+|||++... .++.++|+||||+++|+|++|..||........ +....... +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~-~ 224 (267)
T cd06610 147 GVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQND-P 224 (267)
T ss_pred chHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhcCC-C
Confidence 9998765433221 22334588999999998776 789999999999999999999999975432211 11111100 0
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...... ......+..+.+++.+||..||++|||+.+|++
T Consensus 225 ~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 PSLETG-----------------------------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcCCc-----------------------------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000 001234567889999999999999999999975
No 273
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.3e-39 Score=303.65 Aligned_cols=248 Identities=20% Similarity=0.297 Sum_probs=197.9
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
..|+..+.||.|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++||||+++++++.+. ...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEEE
Confidence 3577888999999999999984 468899999987432 22345688999999999999999999998543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++|+|.+++... .+++.++..++.|++.||.||| +++++|+||+|+||+++.++.++|+||
T Consensus 79 lv~e~~~~~~L~~~i~~~----------~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~df 145 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG----------PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEEecCCCCcHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEccc
Confidence 999999999999998753 2457788899999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......++..|+|||++.+..++.++|+||||+++|||++|..||......... . ..+..
T Consensus 146 g~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-----~-~~~~~- 216 (277)
T cd06640 146 GVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-----F-LIPKN- 216 (277)
T ss_pred ccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-----h-hhhcC-
Confidence 99976543221 122345788999999998888999999999999999999999999753221100 0 00000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. .+......+..+.+++.+||+.||++|||+.+++..
T Consensus 217 ---~--------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 ---N--------------------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---C--------------------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0 001122456788999999999999999999999765
No 274
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.1e-39 Score=297.61 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=196.3
Q ss_pred CCccceeecCCCeEEEEEEecC-----CCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 147 FSSANLIGAGNFGSVYNGTLFD-----GTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
|.+.+.||.|+||.||++.... +..||+|.++..... ....+.+|+..+..++|+||+++++++.+. ..
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Ce
Confidence 4567889999999999998543 388999998654332 456789999999999999999999998553 46
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+++++|.+++...... .+++.++..++.|++.||.||| +.+++|+||||+||+++.++.++|+
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~ 145 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK-------ELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKIS 145 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc-------cCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEc
Confidence 79999999999999999765421 1568899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+++........... ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... .........
T Consensus 146 dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~ 219 (258)
T smart00219 146 DFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYLKK 219 (258)
T ss_pred ccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhc
Confidence 99999876543211111 2236789999999988889999999999999999998 7888865211 111110000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
.... ..+...+..+.+++.+||+.||++|||+.|+++.|
T Consensus 220 ~~~~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 220 GYRL-------------------------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCC-------------------------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0000 00112456788999999999999999999998764
No 275
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.4e-39 Score=300.42 Aligned_cols=238 Identities=21% Similarity=0.330 Sum_probs=185.4
Q ss_pred ceeecCCCeEEEEEEecC-C----------CEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 151 NLIGAGNFGSVYNGTLFD-G----------TTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+.||+|+||.||+|...+ + ..+++|.+...... ...+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 468999999999999543 3 25788877643332 6788999999999999999999998754 2
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc----
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM---- 295 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~---- 295 (473)
..++||||+++|+|.+++..... .+++..+..++.||+.||.||| +++|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~ 142 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN--------NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEG 142 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccC
Confidence 45899999999999999986542 3557889999999999999999 99999999999999999887
Q ss_pred ---cEEEeecccccccCccccccceeeccCCCCcCCCccccCC--CCCcccchhhHhHHHHHHHh-CCCCCCCCCCCccc
Q 012014 296 ---IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC--EASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMN 369 (473)
Q Consensus 296 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~ 369 (473)
.+||+|||++..... .....++..|+|||++.+. .++.++||||||+++|+|++ |..||.......
T Consensus 143 ~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~-- 214 (259)
T cd05037 143 YVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE-- 214 (259)
T ss_pred CceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--
Confidence 799999999986533 1123467789999998876 78999999999999999999 577776532111
Q ss_pred HHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 370 LRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
...... ... .. . ......+.+++.+||..||.+|||+.+|++.|
T Consensus 215 ~~~~~~---~~~--~~----------------------~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 KERFYQ---DQH--RL----------------------P---------MPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHHHh---cCC--CC----------------------C---------CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 000 00 0 00115788999999999999999999999887
Q ss_pred H
Q 012014 450 R 450 (473)
Q Consensus 450 ~ 450 (473)
+
T Consensus 259 ~ 259 (259)
T cd05037 259 N 259 (259)
T ss_pred C
Confidence 3
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.9e-39 Score=304.76 Aligned_cols=202 Identities=24% Similarity=0.381 Sum_probs=166.8
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.++|++.+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++.+ ....
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-----KKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-----CCeE
Confidence 36789999999999999999984 4689999999874332 233457789999999999999999999754 3478
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||++ ++|.+++..... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~~--------~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~d 146 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCGG--------GLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLAD 146 (291)
T ss_pred EEEEecCC-CCHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECc
Confidence 99999997 599998875432 2558889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCC
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIF 364 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~ 364 (473)
||+++...... .......++..|+|||++.+ ..++.++||||||+++|+|++|..||.+..
T Consensus 147 fg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 147 FGLARAKSVPS--KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred cccccccCCCC--ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 99987543211 11122346888999999875 458899999999999999999999997643
No 277
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.6e-39 Score=302.95 Aligned_cols=261 Identities=20% Similarity=0.286 Sum_probs=201.0
Q ss_pred cccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecccc-CCc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 218 (473)
..+++|++.+.||+|+||.||+|.. .+++.+++|++..... ..+.+.+|+.+++++ +|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4578999999999999999999995 4678999999875432 346789999999999 79999999999876442 234
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+++++|.+++...... ...+++..+..++.|++.||.||| +++++|+||+|+||+++.++.+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~ 153 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK-----GKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVK 153 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEE
Confidence 5689999999999999998653311 013568889999999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccC-----CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-----CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
|+|||++....... .......|+..|+|||++.. ..++.++||||||+++|+|++|..||....... .+...
T Consensus 154 l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~ 230 (275)
T cd06608 154 LVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKI 230 (275)
T ss_pred ECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHh
Confidence 99999987654322 22233458999999998753 346788999999999999999999997432111 11110
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. .....+ ......+..+.+|+.+||..||++|||+.||++
T Consensus 231 ~~----~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PR----NPPPTL-----------------------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hc----cCCCCC-----------------------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 000000 001224567889999999999999999999975
No 278
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.1e-39 Score=306.71 Aligned_cols=248 Identities=19% Similarity=0.272 Sum_probs=195.0
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
|.....||+|+||.||+|. ..+++.||+|.+........+.+.+|+.++..++||||+++++++.. ....+++|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEEEEE
Confidence 3445579999999999998 45789999999876554556678899999999999999999998754 34679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++++|.+++... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||++
T Consensus 98 e~~~~~~L~~~~~~~----------~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~ 164 (297)
T cd06659 98 EFLQGGALTDIVSQT----------RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFC 164 (297)
T ss_pred ecCCCCCHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhH
Confidence 999999999987553 2558889999999999999999 999999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
....... .......|+..|+|||++.+..++.++|||||||++|||++|..||....... .+. ......+.. .
T Consensus 165 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~-~~~~~~~~~---~ 237 (297)
T cd06659 165 AQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AMK-RLRDSPPPK---L 237 (297)
T ss_pred hhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-HHhccCCCC---c
Confidence 7554322 11223458999999999998889999999999999999999999997432111 000 000000000 0
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
......+..+.+++.+||+.||++|||+.+|++.
T Consensus 238 -----------------------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 -----------------------------KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -----------------------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0001234567889999999999999999999874
No 279
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-40 Score=302.84 Aligned_cols=281 Identities=26% Similarity=0.348 Sum_probs=208.1
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHh--cCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
......++||+|+||.||+|.+ +++.||||++.. .....|++|-+|.+. +.|+||++++++-...+.. ...++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-cccee
Confidence 4556778899999999999996 559999999863 346678888888765 4899999999886554422 55789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhC------CCCCeeeccCCCCcEEecCCcc
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCD------CQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~------~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
||++|.+.|+|.+||..+. ++|....+++..+++||+|||+. ...+|+|||||+.|||+.++++
T Consensus 285 LVt~fh~kGsL~dyL~~nt----------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT 354 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANT----------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT 354 (534)
T ss_pred EEeeeccCCcHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc
Confidence 9999999999999999874 66999999999999999999953 2457999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCC-CC-----cccchhhHhHHHHHHHhCCCCCC-C-CCCCcc
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-AS-----TYGDVYSFGILLLEMFTGIRPSD-G-IFTGKM 368 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwSlG~il~elltg~~P~~-~-~~~~~~ 368 (473)
+.|+|||+|..+............+||.+|||||++.+.. +. .+.||||+|.|||||+++..-++ + ...-+.
T Consensus 355 ccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yql 434 (534)
T KOG3653|consen 355 CCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQL 434 (534)
T ss_pred EEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccC
Confidence 9999999999887766666666688999999999988743 22 34799999999999999654432 1 111111
Q ss_pred cHHHHHHhhcC-cchh-hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 369 NLRNFVKMALP-QRAE-EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 369 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
.+..-+..... ++.. -++.......+.+.++. .....-|++.+..||..||+.|.|+.=+.
T Consensus 435 pfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~-----------------h~~~~~l~et~EeCWDhDaeARLTA~Cv~ 497 (534)
T KOG3653|consen 435 PFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRK-----------------HAGMAVLCETIEECWDHDAEARLTAGCVE 497 (534)
T ss_pred chhHHhcCCCCHHHHHHHHHhhccCCCChhhhhc-----------------CccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence 11111110000 0000 11111111111111111 13567899999999999999999999999
Q ss_pred HHHHHHHHhhc
Q 012014 447 SRLRLIRRKLL 457 (473)
Q Consensus 447 ~~L~~l~~~~~ 457 (473)
+++..+.....
T Consensus 498 eR~~~l~~~~~ 508 (534)
T KOG3653|consen 498 ERMAELMMLWE 508 (534)
T ss_pred HHHHHHhccCC
Confidence 99999965443
No 280
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=314.21 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=202.7
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
......|.+.+.||+|.|+.|.+|+ ..++..||||.+.+...+ ....+.+|+++|..++|||||+++.+.. .
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-----t 126 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-----T 126 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-----e
Confidence 3456789999999999999999999 567999999999754433 2345889999999999999999999964 3
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
...+|+||||+.+|.+.+|+..++. ..+..+..++.|+.+|++||| +++|+|||||++|||++.+.++
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~gr---------~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKHGR---------MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNI 194 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhccc---------chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccce
Confidence 4578999999999999999998874 335778889999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCC-CcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||++..+.. .....+.+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||++..-
T Consensus 195 kIaDfgfS~~~~~---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l----------- 260 (596)
T KOG0586|consen 195 KIADFGFSTFFDY---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL----------- 260 (596)
T ss_pred eeeccccceeecc---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----------
Confidence 9999999998753 444556789999999999998776 6789999999999999999999987321
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.++-++.+...+. .+.-...+..+|++++|-.+|.+|+++++|.+
T Consensus 261 ------k~Lr~rvl~gk~r--------------------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 261 ------KELRPRVLRGKYR--------------------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ------ccccchheeeeec--------------------ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1111111111100 01112334557889999999999999999865
No 281
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=316.57 Aligned_cols=208 Identities=29% Similarity=0.408 Sum_probs=175.9
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc-cCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD-YQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~l 223 (473)
|...+.||+||||.||+|+ ..+|+.||||.++... ....+...+|+++|++++|||||+++++-.+.. +.......+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4567789999999999999 6789999999998533 345677889999999999999999998854322 111445789
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec--CCc--cEEE
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD--DEM--IGHV 299 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~--~~~--~~kl 299 (473)
|||||++|||..+|+..... ..+++.+.+.++.+++.||.||| .+||+||||||.||++- .+| ..||
T Consensus 95 vmEyC~gGsL~~~L~~PEN~------~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENA------YGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred EEeecCCCcHHHHhcCcccc------cCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEee
Confidence 99999999999999876543 26889999999999999999999 99999999999999983 323 5699
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~ 366 (473)
+|||.|+.+++. ....+..||..|.+||+... ..|+..+|.|||||++|+++||..||-.....
T Consensus 166 tDfG~Arel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 166 TDFGAARELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred ecccccccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 999999988653 36677889999999999984 78999999999999999999999999765444
No 282
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=306.06 Aligned_cols=249 Identities=24% Similarity=0.294 Sum_probs=199.1
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
.+.|+.-++||+||||.||-++ ..+|+.+|+|.+.+.+ ........+|-.+|.+++.++||.+-..|.+ ..
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT-----kd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET-----KD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC-----CC
Confidence 4668899999999999999998 5679999999886432 2233456799999999999999999887644 44
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
.+|+||..|.||+|.-+|.+.+.. .|++..++-++.+|+.||++|| +.+||+||+||+|||+|+.|+++|
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~-------gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNP-------GFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCC-------CCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEe
Confidence 789999999999999999887643 4779999999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|+|+|..++... ......||.+|||||++.+..|+...|+|||||++|||+.|..||........
T Consensus 329 SDLGLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk----------- 394 (591)
T KOG0986|consen 329 SDLGLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK----------- 394 (591)
T ss_pred eccceEEecCCCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-----------
Confidence 9999999876543 33344799999999999999999999999999999999999999964321110
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.+-++...... .-..+...+++..+|....|..||.+|....
T Consensus 395 ---~eEvdrr~~~~-------------------~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 395 ---REEVDRRTLED-------------------PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred ---HHHHHHHHhcc-------------------hhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 00011111100 0011234566778888899999999997644
No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.5e-39 Score=305.07 Aligned_cols=251 Identities=19% Similarity=0.222 Sum_probs=199.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.++|.+.+.||+|+||.||++. ..+++.||+|.+........+.+.+|+.+++.++||||+++++.|... ...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----CcEE
Confidence 3678999999999999999998 456889999998755545566789999999999999999999987543 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|+||+++++|.+++.... +++.++..++.|++.||.||| +++++|+||||+||+++.++.+||+||
T Consensus 93 lv~e~~~~~~L~~~~~~~~----------l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 93 VVMEYLAGGSLTDVVTETC----------MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred EEEecCCCCcHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccC
Confidence 9999999999999997542 457888999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++........ ......|++.|+|||.+.+..++.++||||||+++|++++|..||......... ..... ...
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~~~---~~~- 232 (293)
T cd06647 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIAT---NGT- 232 (293)
T ss_pred cceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eehhc---CCC-
Confidence 99876543321 222345889999999998888999999999999999999999999753221100 00000 000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. ........+..+.+++.+||..+|++||++.+++..
T Consensus 233 ~-----------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 233 P-----------------------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred C-----------------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000011245578899999999999999999998754
No 284
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7.7e-39 Score=297.83 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=195.0
Q ss_pred CCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC-----CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP-----GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|+..+.||+|+||.||+|... +++.|++|.+..... ...+.+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-----ED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-----CC
Confidence 4777889999999999999954 789999999875332 133568899999999999999999998754 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++++||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl 143 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG---------SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKL 143 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 6799999999999999997653 2457888899999999999999 899999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||++....... ......|+..|+|||.+.... ++.++|+||||+++|+|++|..||....... .......
T Consensus 144 ~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~ 216 (258)
T cd06632 144 ADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA----AVFKIGR 216 (258)
T ss_pred ccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH----HHHHHHh
Confidence 9999987654322 223445889999999987766 8999999999999999999999997532111 0000000
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... +..+......+.+++.+||+.||.+|||+.+++.
T Consensus 217 ~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 217 SKEL-------------------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cccC-------------------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0000 0001123567788999999999999999999875
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-38 Score=296.66 Aligned_cols=248 Identities=21% Similarity=0.354 Sum_probs=195.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|+..+.||+|+||.||++. ..+++.+|+|.+.... ......+.+|+.+++.++||||+++++.+.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 47888999999999999998 4578899999987432 2234578899999999999999999998753 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-ccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-MIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-~~~kl~D 301 (473)
+||||+++++|.+++...... .+++..+..++.|++.||.||| +++++|+||+|+||+++.+ +.+||+|
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d 145 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNS-------LLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGD 145 (256)
T ss_pred EEEecCCCCCHHHHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcc
Confidence 999999999999999764321 3568889999999999999999 9999999999999999754 4689999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.... ..........
T Consensus 146 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~ 217 (256)
T cd08220 146 FGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLKIMSGT 217 (256)
T ss_pred CCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHHHHhcC
Confidence 99998764322 122345789999999999888999999999999999999999998653211 1111000000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. +.+...+..+.+++.+||+.||++|||+.|++.
T Consensus 218 ~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 218 FA-------------------------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CC-------------------------------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 001124557889999999999999999999975
No 286
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.3e-39 Score=304.70 Aligned_cols=246 Identities=21% Similarity=0.311 Sum_probs=195.1
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.|+..+.||+|+||.||+|. ..+++.||+|.++... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-----GTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-----CCceEE
Confidence 46677889999999999998 4567899999986432 2234568899999999999999999999754 346799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++++|.+++... .+++..+..++.|++.||.||| +++++|+||+|+||+++.++.++|+|||
T Consensus 80 v~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06642 80 IMEYLGGGSALDLLKPG----------PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred EEEccCCCcHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEcccc
Confidence 99999999999998653 2557888999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
++..+.... .......|+..|+|||++.+..++.++||||||+++|||++|..||........ ... .....
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~----~~~~~- 217 (277)
T cd06642 147 VAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFL----IPKNS- 217 (277)
T ss_pred ccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhh----hhcCC-
Confidence 997654322 112234578899999999988899999999999999999999999865322110 000 00000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. +......+..+.+++.+||+.+|++|||+.+|+.
T Consensus 218 ---~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 218 ---P--------------------------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ---C--------------------------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 0001124567889999999999999999999987
No 287
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.7e-39 Score=301.98 Aligned_cols=276 Identities=20% Similarity=0.251 Sum_probs=195.6
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|+..+.||.|++|.||+|+. .+++.||||.++... ......+.+|++++++++||||+++++++.+ ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-----CCcEE
Confidence 488899999999999999984 468999999886432 2233568899999999999999999999754 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+. ++|.+++...... .+++..+..++.|++.||.||| +++++|+||+|+||+++.++.+||+||
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~-------~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~df 144 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPLS-------GIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 144 (284)
T ss_pred EEeeccc-cCHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeec
Confidence 9999995 6899988654322 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
|++....... .......+++.|+|||++.+.. ++.++||||||+++|+|+||..||.+..... .+...........
T Consensus 145 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~ 221 (284)
T cd07860 145 GLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPD 221 (284)
T ss_pred cchhhcccCc--cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 9987654322 1122334688999999887644 6889999999999999999999997533211 1111111111000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
... .+... .+..... ....................+.+++.+||+.||.+|||+.++++
T Consensus 222 -~~~-~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 222 -EVV-WPGVT-SLPDYKP----SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred -hhh-hhhhh-HHHHHHh----hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 00000 0000000 00000000000111224567889999999999999999999874
No 288
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-40 Score=287.58 Aligned_cols=259 Identities=22% Similarity=0.301 Sum_probs=203.8
Q ss_pred hcccCCCCcc-ceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCC
Q 012014 141 YNATNGFSSA-NLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 141 ~~~~~~~~~~-~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 217 (473)
+..+++|++. ++||-|-.|.|..+. ..+++++|+|++. +....++|++..-.. .|||||.++++|.. .+++
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~ 130 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYEN-SYQG 130 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhh-hccC
Confidence 4466777654 679999999999988 6689999999986 345677888875544 69999999999854 4577
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC---C
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD---E 294 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~---~ 294 (473)
...+.+|||.|+||.|...++.++.. .|+++++..|+.||+.|+.||| +.+|.||||||+|+|... |
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~-------afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~n 200 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQ-------AFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPN 200 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccc-------cchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCC
Confidence 78889999999999999999988754 5889999999999999999999 999999999999999954 4
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
..+||+|||+|+.-.. .....+.+-||.|.|||++....|+..+|+||+||++|-|++|.+||........ .
T Consensus 201 a~lKLtDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--s--- 272 (400)
T KOG0604|consen 201 APLKLTDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--S--- 272 (400)
T ss_pred cceEecccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--C---
Confidence 5799999999986432 3444566789999999999999999999999999999999999999986543211 0
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.....+..++- .+..++=...++...+++...|+.+|.+|.|+.|+..
T Consensus 273 -------------pgMk~rI~~gqy-----------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 273 -------------PGMKRRIRTGQY-----------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred -------------hhHHhHhhccCc-----------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 000000000000 0000111346778889999999999999999999864
No 289
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=349.38 Aligned_cols=262 Identities=24% Similarity=0.410 Sum_probs=203.6
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
..|...++||+|+||.||+|.. .++..||+|+++.... ....|++.+++++|||||+++++|.+. ...++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~l 760 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYL 760 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEE
Confidence 4577788999999999999984 6789999999864321 224568899999999999999998653 35799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++|+|.++++. +++.++..++.|++.||+|||+.++.+|+||||||+||+++.++..++. ||
T Consensus 761 v~Ey~~~g~L~~~l~~------------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~ 827 (968)
T PLN00113 761 IHEYIEGKNLSEVLRN------------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS 827 (968)
T ss_pred EEeCCCCCcHHHHHhc------------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec
Confidence 9999999999999963 3488899999999999999996666799999999999999998888775 66
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc-ch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ-RA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~ 382 (473)
........ ....||+.|+|||++.+..++.++|||||||++|||+||+.||+........+..+.+..... ..
T Consensus 828 ~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 901 (968)
T PLN00113 828 LPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901 (968)
T ss_pred cccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccch
Confidence 55432111 122578999999999998999999999999999999999999976555444555555433221 12
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRR 454 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~ 454 (473)
..+.++..... .....+...++.+++.+||+.||++||||.||++.|+.+.+
T Consensus 902 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 902 DMWIDPSIRGD--------------------VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hheeCccccCC--------------------CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 22222221110 01123456678899999999999999999999999998855
No 290
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-38 Score=305.86 Aligned_cols=209 Identities=22% Similarity=0.313 Sum_probs=168.7
Q ss_pred CCCccceeecCCCeEEEEEEe-c--CCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-F--DGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|.+.++||+|+||.||+|.. . +++.||+|.+.... ......+.+|+.++..++||||+++++++.+. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 478889999999999999994 3 57999999997533 33446778999999999999999999998653 234
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC----Cc
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD----EM 295 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~----~~ 295 (473)
..++||||++ ++|.+++........ ..+++..+..++.|++.||.||| +++|+||||||+||+++. ++
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~ 149 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAKR----VSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERG 149 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCCC----cCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccc
Confidence 7899999996 578777754332211 14668889999999999999999 999999999999999999 99
Q ss_pred cEEEeecccccccCcccc-ccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCC
Q 012014 296 IGHVGDFGMARFLPAIDK-QNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFT 365 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~ 365 (473)
.+||+|||++........ ........+|+.|+|||++.+. .++.++||||||+++|+|++|.+||.+...
T Consensus 150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred eEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 999999999986643322 1112234578899999987664 578999999999999999999999986543
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.3e-39 Score=301.95 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=189.3
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHH-HHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKA-AINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.+.||+|+||.||+|.. .+|+.||+|+++.... .....+..|+.+ ++.++||||+++++++... ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~-----~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE-----GDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-----CcE
Confidence 4788999999999999999984 5699999999875322 223345566665 5667899999999998543 367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCcEEecCCccEEEe
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQP-PIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+++|||++ |+|.+++....... ..+++..++.++.|++.||.||| ++ +++||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~ 146 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDKG-----LTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLC 146 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccCC-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEe
Confidence 99999995 78988876532211 14678999999999999999999 76 99999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC----CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG----CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
|||++....... ......|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||.........+.....
T Consensus 147 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~- 222 (283)
T cd06617 147 DFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE- 222 (283)
T ss_pred eccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh-
Confidence 999998653321 1122457899999998865 45688999999999999999999999642211111111100
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....... ....+..+.+++.+||..+|++|||+.+|++
T Consensus 223 ---~~~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 223 ---EPSPQLP------------------------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ---cCCCCCC------------------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 0124567889999999999999999999976
No 292
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.5e-39 Score=305.98 Aligned_cols=276 Identities=20% Similarity=0.295 Sum_probs=197.0
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.++||+|+||.||+|... +++.||+|++..... ...+.+.+|++++..++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 46888999999999999999954 589999999864322 234568899999999999999999999853 3468
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||+++++|..+..... .+++.++..++.|++.||.||| +.+++|+||+|+||++++++.++|+|
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~d 143 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN---------GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCD 143 (286)
T ss_pred EEEEecCCccHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEe
Confidence 99999999999988775432 2558899999999999999999 89999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh--c
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA--L 378 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~--~ 378 (473)
||++....... .......|+..|+|||++.+ ..++.++||||||+++|+|++|.+||......+ .+....... .
T Consensus 144 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~ 220 (286)
T cd07846 144 FGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNL 220 (286)
T ss_pred eeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCC
Confidence 99988654322 11223457889999999875 347889999999999999999999986532111 111111000 0
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
........+.... ... ...................+..+.+|+.+||+.||++|||+.+|++
T Consensus 221 ~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 221 IPRHQEIFQKNPL---FAG----MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred chhhHHHhccchH---hhc----cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000000000000 000 0000000000001112235678999999999999999999999875
No 293
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-38 Score=300.95 Aligned_cols=273 Identities=19% Similarity=0.244 Sum_probs=199.6
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 478889999999999999984 578999999987543 2334678999999999999999999999854 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+ +++|.+++..... .+++.++..++.||+.||.||| +++++|+||||+||+++.++.++|+||
T Consensus 76 ~v~e~~-~~~L~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~df 143 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEER--------PLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADF 143 (286)
T ss_pred EEeccc-CCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeee
Confidence 999999 9999999875431 3668899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc-
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ- 380 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~- 380 (473)
|++........ .......|+..|+|||.+.+. .++.++||||+|+++|+|++|.+||.+.... ..+..........
T Consensus 144 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (286)
T cd07832 144 GLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPN 221 (286)
T ss_pred eecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCC
Confidence 99987644321 122334589999999998654 4689999999999999999998888653321 1111111111100
Q ss_pred --chhhhccccchHHHHhhhhhhcccccCCC-CcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 --RAEEVVDDFNLQEIEEGRTMCMEVSSSSG-SSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+..+.. .+. ....... .........+.+..+.+|+.+||+.||++|||+.++++
T Consensus 222 ~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 222 EETWPGLTSLP---DYN-------KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hHHHhhccCcc---hhh-------cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 000 0000000 00011111234578999999999999999999999875
No 294
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.4e-39 Score=310.71 Aligned_cols=289 Identities=18% Similarity=0.208 Sum_probs=206.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
..++|.+.+.||+|+||.||+|. ..+++.||+|.++.. .......+.+|+.++..++||||+++++++.........
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 34679999999999999999998 457899999998643 222345677899999999999999999988655433334
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++|||+. ++|.+++.... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~---------~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL 149 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ---------TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKI 149 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEE
Confidence 6899999995 79999987653 3568899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++...... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... ..+........
T Consensus 150 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~ 226 (337)
T cd07858 150 CDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLG 226 (337)
T ss_pred CcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhC
Confidence 9999998654322 11223457889999998765 46899999999999999999999999764211 11111111110
Q ss_pred C---cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH--HHHHH
Q 012014 379 P---QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR--LRLIR 453 (473)
Q Consensus 379 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~l~ 453 (473)
+ .....+.+........ ........ .........+..+.+++.+||+.||++|||+.|+++. ++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 227 SPSEEDLGFIRNEKARRYIR-------SLPYTPRQ-SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred CCChHHhhhcCchhhhHHHH-------hcCccccc-CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0 0010111100000000 00000000 0011122456788999999999999999999999877 76664
Q ss_pred Hh
Q 012014 454 RK 455 (473)
Q Consensus 454 ~~ 455 (473)
..
T Consensus 299 ~~ 300 (337)
T cd07858 299 DP 300 (337)
T ss_pred Cc
Confidence 43
No 295
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-38 Score=308.36 Aligned_cols=284 Identities=21% Similarity=0.256 Sum_probs=203.5
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.++|++.+.||+|+||.||+|. ..+++.||+|++.... ......+.+|+.++.+++||||++++++|.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 4689999999999999999998 4579999999987432 233456788999999999999999999876543 33456
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+. |+|.+++.... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~ 149 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---------PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIG 149 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEec
Confidence 899999995 69999987543 3568899999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccc--cceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||++......... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+..... .+.... ..
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~-~~ 227 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLIL-SV 227 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHH-HH
Confidence 99999765432211 11123468899999998765 458899999999999999999999997643211 111111 11
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
......+..+............ .................+..+.+++.+||+.||++|||+.+++.
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQ----NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHh----hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1111111111111111000000 00000011111122335778999999999999999999999876
No 296
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-38 Score=295.96 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=201.4
Q ss_pred CCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
++|++.+.||+|++|.||+|... +++.|++|++..... .....+.+|+..+.+++|+||+++++++... ...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeEE
Confidence 46888999999999999999954 589999999875443 3456789999999999999999999998543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++|||+++++|.+++.... .+++..++.++.|++.||.||| + .+++|+||+|+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~d 143 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG---------KIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIAD 143 (264)
T ss_pred EEEEecCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEcc
Confidence 9999999999999997653 3568899999999999999999 8 9999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||.+......... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...... .............
T Consensus 144 f~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~ 219 (264)
T cd06623 144 FGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGP 219 (264)
T ss_pred CccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCC
Confidence 9999866433222 12344788999999999888999999999999999999999999764321 1111111111000
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHH-HHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILE-CFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.. ..... .+..+.+++.+||+.+|++|||+.|+++.
T Consensus 220 ~~-------------------------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 220 PP-------------------------------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CC-------------------------------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00 00112 45688899999999999999999999873
No 297
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.4e-38 Score=297.12 Aligned_cols=252 Identities=24% Similarity=0.327 Sum_probs=196.7
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|...+.||+|+||.||+|.. .+++.|++|.++..... ....+.+|+.+++.++|+||+++++.+.. ....+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-----REKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-----CCEEE
Confidence 578889999999999999984 47899999998755433 45678899999999999999999998643 34679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|+||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+||
T Consensus 76 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~ 143 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR---------ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDF 143 (264)
T ss_pred EEEecCCCCcHHHHHhhcC---------CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccc
Confidence 9999999999999997653 2447788899999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccc--eeeccCCCCcCCCccccCCC---CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 303 GMARFLPAIDKQNR--FICIKGSTGYIPPEYDLGCE---ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 303 g~~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|++........... .....++..|+|||++.+.. ++.++||||||+++|+|++|..||........ .......
T Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~- 221 (264)
T cd06626 144 GCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGA- 221 (264)
T ss_pred ccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhc-
Confidence 99987644322111 12345788999999988766 88999999999999999999999975321110 0000000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.....+ . .....+..+.+++.+||+.||.+|||+.|++.
T Consensus 222 --~~~~~~-~----------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 --GHKPPI-P----------------------------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --CCCCCC-C----------------------------cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 0 00123556789999999999999999999864
No 298
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.3e-39 Score=304.93 Aligned_cols=243 Identities=23% Similarity=0.299 Sum_probs=194.6
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|.+.+.||+|+||.||++.. .+++.+|+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-----DSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCe
Confidence 4788999999999999999984 468999999986432 2334668899999999999999999999754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++++|.+++.... .++...+..++.|++.||.||| +++++|+||+|+||+++.++.+||+
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~---------~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~ 143 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG---------RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKIT 143 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEe
Confidence 899999999999999997653 3568889999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++...... .....|++.|+|||.+.+...+.++||||||+++|+|++|..||...... .........
T Consensus 144 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~ 213 (290)
T cd05580 144 DFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-----QIYEKILEG 213 (290)
T ss_pred eCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcC
Confidence 99999865432 22345899999999998888899999999999999999999999753210 000000000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVE 446 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~ 446 (473)
.. ..+...+..+.+++.+||..||.+|| +++|++
T Consensus 214 ~~--------------------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 214 KV--------------------------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred Cc--------------------------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 00 00112345778999999999999999 666665
No 299
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-38 Score=297.13 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=199.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||.|+||.||++. ..+++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++... .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 47888999999999999998 4578899999986432 22345688899999999999999999987542 234679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCC--CCCeeeccCCCCcEEecCCccEEEe
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDC--QPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~--~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
++|||+++++|.+++...... ...+++..++.++.|++.||.|||... +.+++|+||||+||+++.++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE-----RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEe
Confidence 999999999999999754211 113668899999999999999999432 5689999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ..+.......
T Consensus 153 d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~ 225 (265)
T cd08217 153 DFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----LQLASKIKEG 225 (265)
T ss_pred cccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----HHHHHHHhcC
Confidence 9999987654321 12234589999999999988899999999999999999999999976321 1111111000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
... ..+...+..+.+++.+||+.+|++|||+.+|++
T Consensus 226 ~~~-------------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 226 KFR-------------------------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCC-------------------------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000 011234567889999999999999999999986
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-38 Score=300.60 Aligned_cols=248 Identities=20% Similarity=0.241 Sum_probs=195.6
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
.|...+.||+|++|.||++. ..+++.+++|+++.......+.+.+|+.++..++||||+++++++... ...+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~-----~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG-----DELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC-----CeEEEE
Confidence 35556799999999999998 457899999998755444556788999999999999999999987543 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
+||+++++|.+++... .+++.++..++.|++.||.||| +++++||||+|+||+++.++.++|+|||+
T Consensus 95 ~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~ 161 (285)
T cd06648 95 MEFLEGGALTDIVTHT----------RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGF 161 (285)
T ss_pred EeccCCCCHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEccccc
Confidence 9999999999998763 2557888999999999999999 99999999999999999999999999998
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
+........ ......|++.|+|||.+.+..++.++||||||+++|+|++|..||...... . ............
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~----~-~~~~~~~~~~~~ 234 (285)
T cd06648 162 CAQVSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL----Q-AMKRIRDNLPPK 234 (285)
T ss_pred chhhccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH----H-HHHHHHhcCCCC
Confidence 875543221 122345899999999998888999999999999999999999998652111 0 000000000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ......+..+.+++.+||+.||++|||+.++++
T Consensus 235 ~-----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 235 L-----------------------------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred C-----------------------------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0 000123457889999999999999999999975
No 301
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.4e-39 Score=311.74 Aligned_cols=286 Identities=17% Similarity=0.173 Sum_probs=200.1
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
..++|+..+.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.++++++||||++++++|..... .+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 45789999999999999999998 4578999999986422 2233567789999999999999999998864321 223
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+. ++|.+++... ++...+..++.|++.||.||| ++||+||||||+||+++.++.+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-----------l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~k 158 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-----------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 158 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-----------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEE
Confidence 45799999995 5888887543 447788899999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|+|||+++...... ......|+..|+|||.+.+..++.++|||||||++|+|++|..||...... ..+........
T Consensus 159 L~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~ 234 (353)
T cd07850 159 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLG 234 (353)
T ss_pred EccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcC
Confidence 99999998654322 122345789999999999989999999999999999999999999754221 11111111111
Q ss_pred C--cchhhhccccchHHHHhhhhhhc----cc-ccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 P--QRAEEVVDDFNLQEIEEGRTMCM----EV-SSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~--~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. ......++............... .. ................+..+.+++.+||+.||++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 235 TPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred CCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 01111111110000000000000 00 0000000000001234667889999999999999999999985
No 302
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.3e-39 Score=306.53 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=196.2
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|+..+.||+|+||.||+|.. .+++.+|+|.+...... ....+.+|++++..++||||+++++.+.+ ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 4688899999999999999984 45899999999754322 34568899999999999999999998754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+.+++|.+++...... .+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~-------~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~ 145 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGK-------CLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLS 145 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCC-------ccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEe
Confidence 89999999999999998754321 3668888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc---------------------------cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHH
Q 012014 301 DFGMARFLPAIDKQ---------------------------NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353 (473)
Q Consensus 301 Dfg~~~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 353 (473)
|||++......... .......||..|+|||++.+..++.++||||||+++|+|
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l 225 (316)
T cd05574 146 DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEM 225 (316)
T ss_pred ecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 99998754322110 011123578899999999988899999999999999999
Q ss_pred HhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhccc
Q 012014 354 FTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSA 433 (473)
Q Consensus 354 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 433 (473)
++|..||.+...... +.... ..... .......+..+.+++.+||.
T Consensus 226 ~~g~~pf~~~~~~~~-~~~~~----~~~~~------------------------------~~~~~~~~~~~~~li~~~l~ 270 (316)
T cd05574 226 LYGTTPFKGSNRDET-FSNIL----KKEVT------------------------------FPGSPPVSSSARDLIRKLLV 270 (316)
T ss_pred hhCCCCCCCCchHHH-HHHHh----cCCcc------------------------------CCCccccCHHHHHHHHHHcc
Confidence 999999975432110 11000 00000 00001146688999999999
Q ss_pred CCCCCCCC----hHHHHH
Q 012014 434 ERPRERMK----INDVES 447 (473)
Q Consensus 434 ~dP~~RPt----~~ev~~ 447 (473)
.||++||| +.|++.
T Consensus 271 ~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 271 KDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCHhHCCCchhhHHHHHc
Confidence 99999999 555554
No 303
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-38 Score=298.51 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=196.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC------CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG------GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
+|+..+.||+|+||.||+|. ..+++.+|+|++...... ..+.+.+|++++++++||||+++++++.+ .
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-----D 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-----C
Confidence 47888999999999999998 467899999998743321 23568899999999999999999999854 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-cE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IG 297 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~~ 297 (473)
...++||||+++++|.+++.... .+++..+..++.|++.||.||| +++++|+||+|+||+++.++ .+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~ 143 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG---------AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRL 143 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEE
Confidence 46799999999999999997643 3557889999999999999999 99999999999999998775 69
Q ss_pred EEeecccccccCccccc--cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 298 HVGDFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
||+|||.+......... .......|+..|+|||.+.+..++.++||||+|+++|+|++|..||........ ......
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~ 222 (268)
T cd06630 144 RIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFK 222 (268)
T ss_pred EEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHH
Confidence 99999999776543211 111234578899999999888899999999999999999999999964321110 000000
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... .....+...+..+.+++.+||..||.+|||+.|+++
T Consensus 223 ~~~~~-------------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 223 IASAT-------------------------------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HhccC-------------------------------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00000 001112235677889999999999999999999874
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.8e-38 Score=301.48 Aligned_cols=281 Identities=18% Similarity=0.195 Sum_probs=198.0
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 220 (473)
++|++.+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.++..+. ||||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688999999999999999994 5689999999864332 23456889999999995 699999999986654333445
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccEEE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHV 299 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~kl 299 (473)
.+++|||+++ +|.+++....... ...+++..++.++.||+.||.||| +++|+||||||+||+++. ++.+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl 152 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGP----GRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKI 152 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEE
Confidence 7999999975 8999886543221 113668999999999999999999 999999999999999998 899999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++.+.... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..||.+...... +..+.....
T Consensus 153 ~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~ 229 (295)
T cd07837 153 ADLGLGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLLG 229 (295)
T ss_pred eecccceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHhC
Confidence 9999987653321 11122346888999998765 4578999999999999999999999976432211 111111100
Q ss_pred -Ccc--hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 -PQR--AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.. .............. ..............+..+.+++.+||..||.+|||+.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFP-----------QWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCChhhCcchhhccchhhcC-----------cccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 00000000000000 00000000111235677899999999999999999999874
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.4e-38 Score=302.79 Aligned_cols=274 Identities=19% Similarity=0.233 Sum_probs=196.6
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC-----CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG-----GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|...+.||+|+||.||+|.. .+++.||+|.++..... ....+.+|+.++..++|+||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 477888999999999999984 46899999999754322 23456789999999999999999999855 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+ +|+|.+++..... .+++..+..++.||++||.||| +++++|+||||+||+++.++.++|
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~--------~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l 143 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSI--------VLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKL 143 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEE
Confidence 789999999 9999999976531 3668899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++...... .......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+....+ .+........
T Consensus 144 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~ 220 (298)
T cd07841 144 ADFGLARSFGSPN--RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALG 220 (298)
T ss_pred ccceeeeeccCCC--ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcC
Confidence 9999998764432 11222346788999998855 457899999999999999999988876533211 1111111110
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
........+...... .... ...............+..+.+++.+||+.||++|||+.||++
T Consensus 221 ~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 221 TPTEENWPGVTSLPD------YVEF--KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred CCchhhhhhcccccc------cccc--cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000000 0000 000000001112234678899999999999999999999986
No 306
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.1e-38 Score=296.88 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=194.5
Q ss_pred CCCccceeecCCCeEEEEEEecC--CCEEEEEEeeccCC----------CCchhHHHHHHHHHh-cCCCCceeeeeeeec
Q 012014 146 GFSSANLIGAGNFGSVYNGTLFD--GTTIAVKVFNLIRP----------GGSKSFKSECKAAIN-IKHRNIVRVFTAFSG 212 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 212 (473)
+|++.+.||+|+||.||+|.... ++.+|+|.+..... .....+.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999543 78899998863221 122346778888765 799999999999854
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEe
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLL 291 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~ 291 (473)
. ...+++|||+++++|.+++...... ...+++..++.++.|++.||.||| + .+++|+||+|+||++
T Consensus 81 ~-----~~~~lv~e~~~~~~l~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 81 N-----DRLYIVMDLIEGAPLGEHFNSLKEK-----KQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIML 147 (269)
T ss_pred C-----CeEEEEEecCCCCcHHHHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEE
Confidence 3 4789999999999999988542111 113668889999999999999999 6 689999999999999
Q ss_pred cCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHH
Q 012014 292 DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLR 371 (473)
Q Consensus 292 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~ 371 (473)
+.++.+||+|||.+....... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||..... .
T Consensus 148 ~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~ 219 (269)
T cd08528 148 GEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----L 219 (269)
T ss_pred CCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----H
Confidence 999999999999998654322 23345589999999999988899999999999999999999999864211 1
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.............. .....+..+.+++.+||+.||++|||+.||.++|+
T Consensus 220 ~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 SLATKIVEAVYEPL------------------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHhhccCCcC------------------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110000000000 00123457889999999999999999999998875
No 307
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.8e-39 Score=322.99 Aligned_cols=286 Identities=17% Similarity=0.121 Sum_probs=186.9
Q ss_pred cCCCCccceeecCCCeEEEEEEec--CCCEEEEEEee---------------c--cCCCCchhHHHHHHHHHhcCCCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF--DGTTIAVKVFN---------------L--IRPGGSKSFKSECKAAINIKHRNIV 204 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~---------------~--~~~~~~~~~~~E~~~l~~l~h~niv 204 (473)
.++|++.+.||+|+||.||++... .+...+.|.+. . ........+.+|+.++.+++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998632 22222222110 0 0111234578999999999999999
Q ss_pred eeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
++++++... ...+++++++ +++|.+++........ ......++..++.||+.||.||| +++|+||||
T Consensus 227 ~l~~~~~~~-----~~~~lv~e~~-~~~l~~~l~~~~~~~~----~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDL 293 (501)
T PHA03210 227 KIEEILRSE-----ANTYMITQKY-DFDLYSFMYDEAFDWK----DRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDI 293 (501)
T ss_pred cEeEEEEEC-----CeeEEEEecc-ccCHHHHHhhcccccc----ccccHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 999998653 3578999998 5688888765432110 01235677889999999999999 999999999
Q ss_pred CCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCC
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF 364 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 364 (473)
||+|||++.++.+||+|||+++.+.... ........||..|+|||++.+..++.++|||||||++|||++|..|+.+..
T Consensus 294 KP~NILl~~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 294 KLENIFLNCDGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred CHHHEEECCCCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 9999999999999999999998764422 112233569999999999999899999999999999999999876443222
Q ss_pred CC--cccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh
Q 012014 365 TG--KMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI 442 (473)
Q Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 442 (473)
.. ...+...+..... ...+..+ .....+................... .....+..+.+++.+||+.||.+|||+
T Consensus 373 ~~~~~~~~~~~~~~~~~-~~~~~p~-~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~kmL~~DP~~Rpsa 448 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSV-CDEEFPD-PPCKLFDYIDSAEIDHAGHSVPPLI--RNLGLPADFEYPLVKMLTFDWHLRPGA 448 (501)
T ss_pred CCCHHHHHHHHHHhccc-ChhhcCC-cHHHHHHHhhhhhcccCccchhhHH--HhcCCChHHHHHHHHHhccCcccCcCH
Confidence 11 1122222211100 0000100 0000000000000000000000000 011234567888999999999999999
Q ss_pred HHHHH
Q 012014 443 NDVES 447 (473)
Q Consensus 443 ~ev~~ 447 (473)
.|++.
T Consensus 449 ~elL~ 453 (501)
T PHA03210 449 AELLA 453 (501)
T ss_pred HHHhh
Confidence 99975
No 308
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.5e-38 Score=301.05 Aligned_cols=277 Identities=21% Similarity=0.269 Sum_probs=198.5
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.+.||+|+||.||+|.. .+++.||+|.++... ....+.+.+|++++++++|+||+++++++.. ....
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 4688999999999999999984 468899999987432 2334678999999999999999999999865 3367
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+++|||++++.+..+..... .+++.++..++.||+.||.||| .++++|+||+|+||++++++.+||+|
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d 143 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG---------GLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCD 143 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEe
Confidence 99999998877766654432 2558899999999999999999 89999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh--c
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA--L 378 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~--~ 378 (473)
||++........ .......++..|+|||++.+. .++.++||||||+++|+|++|..||.+....+. +....... .
T Consensus 144 ~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~ 221 (288)
T cd07833 144 FGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQKCLGPL 221 (288)
T ss_pred eecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCC
Confidence 999987654332 122334578899999999887 789999999999999999999999975432111 11100000 0
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCc-chhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSS-AHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
+.......... ..+ . ........... .....+...+.++.+|+.+||+.||++|||+++|++
T Consensus 222 ~~~~~~~~~~~--~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 222 PPSHQELFSSN--PRF-A----GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CHHHhhhcccC--ccc-c----ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000000 000 0 00000000000 000011124788999999999999999999999875
No 309
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2e-38 Score=298.35 Aligned_cols=247 Identities=22% Similarity=0.349 Sum_probs=194.4
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcC---CCCceeeeeeeeccccCCcee
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIK---HRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 220 (473)
.|+..+.||+|+||.||+|. ..+++.||+|.++... ......+.+|+.+++.++ |||++++++++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 57788999999999999999 4678999999986432 334467889999999996 9999999998754 346
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||+++++|.+++... .+++..++.++.|++.||.||| +.+|+|+||+|+||+++.++.++|+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~ 143 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG----------PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLC 143 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEc
Confidence 79999999999999998654 2558889999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||++....... .......|+..|+|||.+.++ .++.++|+||||+++|+|++|..||.+...... ......
T Consensus 144 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~~~~~ 216 (277)
T cd06917 144 DFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----MMLIPK 216 (277)
T ss_pred cCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----hhcccc
Confidence 999998765433 222334589999999988654 478999999999999999999999975322110 000000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.....+. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 217 ~~~~~~~------------------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 217 SKPPRLE------------------------------DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCCC------------------------------cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0000000 0013457889999999999999999999976
No 310
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.8e-38 Score=302.38 Aligned_cols=209 Identities=23% Similarity=0.315 Sum_probs=168.3
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccC---
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ--- 216 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 216 (473)
..++|++.+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.++++++||||+++++++......
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 345799999999999999999984 5689999999864322 2233567899999999999999999988654321
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
.....++||||+. ++|.+++..... .+++.++..++.|++.||.||| +++++|+||||+||+++.++.
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~ 157 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKNV--------KFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGI 157 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCc
Confidence 2345699999995 588888865421 3668899999999999999999 899999999999999999999
Q ss_pred EEEeecccccccCccccc--cceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 297 GHVGDFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
+||+|||++......... .......++..|+|||.+.+.. ++.++||||||+++|+|++|..||.+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999999866432211 1122345788999999876643 788999999999999999999999764
No 311
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=339.51 Aligned_cols=256 Identities=25% Similarity=0.306 Sum_probs=199.9
Q ss_pred hhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccC
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 216 (473)
+...+-++.....||.|.||.||.|. ..+|...|+|-++... ....+.+.+|..++..++|||+|++||+-.+.
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR--- 1306 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR--- 1306 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH---
Confidence 44556778889999999999999999 6679999999887432 34456788999999999999999999996553
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
...+|.||||.+|+|.+.+...+. ..+.....+..|++.|+.||| ++|||||||||+||+++.+|.
T Consensus 1307 --ekv~IFMEyC~~GsLa~ll~~gri---------~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~ 1372 (1509)
T KOG4645|consen 1307 --EKVYIFMEYCEGGSLASLLEHGRI---------EDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGL 1372 (1509)
T ss_pred --HHHHHHHHHhccCcHHHHHHhcch---------hhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCc
Confidence 367899999999999999987642 224445567889999999999 999999999999999999999
Q ss_pred EEEeecccccccCccc--cccceeeccCCCCcCCCccccCCC---CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHH
Q 012014 297 GHVGDFGMARFLPAID--KQNRFICIKGSTGYIPPEYDLGCE---ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLR 371 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~ 371 (473)
+|++|||.|..+.... .........||+.|||||++.+.. ...+.||||+|||+.||+||+.||......-..+-
T Consensus 1373 iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy 1452 (1509)
T KOG4645|consen 1373 IKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY 1452 (1509)
T ss_pred EEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh
Confidence 9999999998775432 112233456999999999987643 56789999999999999999999987543321111
Q ss_pred HHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 372 NFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......| +.+.....+-.+++.+||..||+.|.++.||++
T Consensus 1453 ~V~~gh~P-----------------------------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1453 HVAAGHKP-----------------------------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHhccCCC-----------------------------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11111111 122234455668999999999999998887754
No 312
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5e-38 Score=295.62 Aligned_cols=247 Identities=19% Similarity=0.279 Sum_probs=195.5
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
-|+..+.||+|+||.||+|.. .+++.+|+|.+.... ......+.+|+.++.+++||||+++++++... ...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEEE
Confidence 367788999999999999984 568899999876432 22335688999999999999999999998543 46799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+++++|.+++... .+++..+..++.|++.|+.||| +++++|+||+|+||+++.++.++|+|||
T Consensus 80 v~e~~~~~~l~~~i~~~----------~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg 146 (277)
T cd06641 80 IMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFG 146 (277)
T ss_pred EEEeCCCCcHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecc
Confidence 99999999999998643 2558889999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
++..+.... .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||....... ...........
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~ 219 (277)
T cd06641 147 VAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-----VLFLIPKNNPP 219 (277)
T ss_pred cceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-----HHHHHhcCCCC
Confidence 987654322 11223457889999999988888999999999999999999999996532111 00000000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
......+..+.+++.+||+.+|.+||++.++++.
T Consensus 220 -------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 -------------------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -------------------------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011245678899999999999999999999884
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.5e-38 Score=295.92 Aligned_cols=247 Identities=22% Similarity=0.271 Sum_probs=197.0
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
+|++.+.||.|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+ ....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-----EENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-----CCeE
Confidence 588899999999999999994 4689999999974332 335678899999999999999999988743 3478
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++|+||+.+++|.+++.... .+++.++..++.|++.||.||| +++++|+||+|+||++++++.++|+|
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d 143 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV---------KFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITD 143 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC---------CcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEee
Confidence 99999999999999997652 3558889999999999999999 99999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||++....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||....... ...+..... ..
T Consensus 144 ~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~-~~ 217 (258)
T cd05578 144 FNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQE-TA 217 (258)
T ss_pred cccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhc-cc
Confidence 99988654322 2233458889999999988889999999999999999999999997643221 111111000 00
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCCh--HHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKI--NDVE 446 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~ev~ 446 (473)
....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 218 -------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 -------------------------------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -------------------------------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 001112345788899999999999999999 5554
No 314
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.9e-38 Score=293.78 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=195.9
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|.+.+.||+|+||.||+|.. .+|..+|+|.+.... ....+.+.+|+.+++.++|+||+++++.+.. ....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-----NGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-----CCeEE
Confidence 478889999999999999994 468899999987532 2344578899999999999999999998754 34789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-cEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~~kl~D 301 (473)
+++||+++++|.+++...... .+++..+..++.|++.||.||| +.+++|+||||+||++++++ .+||+|
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d 145 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGV-------LFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGD 145 (257)
T ss_pred EEEecCCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecc
Confidence 999999999999999764321 3568889999999999999999 89999999999999998875 569999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQR 381 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 381 (473)
||.+....... .......|++.|+|||++.+..++.++|+||||+++|+|++|..||..... ...........
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~ 218 (257)
T cd08225 146 FGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVLKICQGY 218 (257)
T ss_pred cccchhccCCc--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhccc
Confidence 99997664322 112234589999999999888899999999999999999999999865321 11111111110
Q ss_pred hhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 382 AEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... ....+..+.+++.+||..+|++|||+.||+.
T Consensus 219 ~~~~-------------------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 219 FAPI-------------------------------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCC-------------------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0000 0123457889999999999999999999975
No 315
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=281.97 Aligned_cols=252 Identities=23% Similarity=0.273 Sum_probs=191.8
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc-CCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCcee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI-RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.++...+..||.|..|.|++++ ..+|..+|||.+... .....+++...+.++... +.|.||+.+|+|.... .
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----d 165 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----D 165 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----h
Confidence 3455567789999999999999 566899999999743 334456677777776655 4899999999997533 5
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++.||.| ...++.+++.-.. .+++.-+-++...+++||.||.. .++|||||+||+|||+|+.|++|||
T Consensus 166 V~IcMelM-s~C~ekLlkrik~--------piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 166 VFICMELM-STCAEKLLKRIKG--------PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred HHHHHHHH-HHHHHHHHHHhcC--------CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEee
Confidence 78899988 3456666654432 35677777889999999999985 6899999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccC---CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG---CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||++..+.+. ...+...|-+.|||||.+.- ..|+..+||||||++++||.||+.||.+-..+-..+...+...
T Consensus 235 DFGIsGrlvdS---kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e 311 (391)
T KOG0983|consen 235 DFGISGRLVDS---KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE 311 (391)
T ss_pred cccccceeecc---cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC
Confidence 99999776442 22334458999999998764 3589999999999999999999999987433333333332211
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
|.. ++. ...++..+.+++..||.+|+.+||...++++
T Consensus 312 -PP~----L~~----------------------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 312 -PPL----LPG----------------------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred -CCC----CCc----------------------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 111 110 0125668889999999999999999998875
No 316
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=290.85 Aligned_cols=202 Identities=22% Similarity=0.270 Sum_probs=175.8
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
-++|...++||+|.||.|-+++ ..+++.+|+|++++.-. .....-..|-++|+..+||.+..+-..| +...
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccCc
Confidence 4689999999999999999998 67899999999985332 2233457899999999999999887766 4455
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
.+|+||||..||.|.-+|.... .|++....-+-.+|+.||.||| +++||.||||.+|+|+|.+|++||
T Consensus 242 rlCFVMeyanGGeLf~HLsrer---------~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKi 309 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRER---------VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKI 309 (516)
T ss_pred eEEEEEEEccCceEeeehhhhh---------cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEe
Confidence 8899999999999999988755 4778888889999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF 364 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 364 (473)
+|||+++.- ........+++|||.|.|||++....|+.++|+|.+||++|||++|+.||....
T Consensus 310 tDFGLCKE~--I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 310 TDFGLCKEE--IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred eecccchhc--ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 999999853 233455667899999999999999999999999999999999999999998643
No 317
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.4e-38 Score=296.09 Aligned_cols=241 Identities=22% Similarity=0.251 Sum_probs=181.8
Q ss_pred eeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHH---hcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 152 LIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAI---NIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
+||+|+||.||++.. .+++.+|+|.+...... ....+.+|..++. ..+||||+.+++++... ...++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP-----DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC-----CeEEEE
Confidence 489999999999984 56899999998643321 1223444544333 34799999999887542 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.++|+|||+
T Consensus 76 ~e~~~~~~L~~~i~~~~---------~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~ 143 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG---------VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 143 (279)
T ss_pred EecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCc
Confidence 99999999999987553 3668899999999999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+....... .....||..|+|||.+.+ ..++.++|||||||++|+|++|..||........ ..........
T Consensus 144 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~--- 214 (279)
T cd05633 144 ACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTV--- 214 (279)
T ss_pred ceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhcC---
Confidence 87553321 123458999999999864 5689999999999999999999999975432211 0000000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
. ...+...+..+.+++.+||+.||++|| |++|+++
T Consensus 215 ---~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 215 ---N--------------------------VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred ---C--------------------------cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 0 001123456788999999999999999 5888866
No 318
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=285.35 Aligned_cols=273 Identities=21% Similarity=0.302 Sum_probs=208.2
Q ss_pred CchhhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeec
Q 012014 135 PSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSG 212 (473)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 212 (473)
..|.+.|..| .+.||+|+|+.|-.+. ..+|..+|||++.+.......+..+|++++.+. .|+||++++++|.+
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3588888777 4689999999999998 789999999999887777778899999999998 59999999999865
Q ss_pred cccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 213 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
. ...|||||-|.||+|..+|+.+. .|++.++.++..+|+.||.||| .+||.|||+||+|||..
T Consensus 148 d-----~~FYLVfEKm~GGplLshI~~~~---------~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~ 210 (463)
T KOG0607|consen 148 D-----TRFYLVFEKMRGGPLLSHIQKRK---------HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCE 210 (463)
T ss_pred c-----ceEEEEEecccCchHHHHHHHhh---------hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeec
Confidence 3 36799999999999999998775 6889999999999999999999 99999999999999996
Q ss_pred CCc---cEEEeecccccccCcc-----ccccceeeccCCCCcCCCcccc---C--CCCCcccchhhHhHHHHHHHhCCCC
Q 012014 293 DEM---IGHVGDFGMARFLPAI-----DKQNRFICIKGSTGYIPPEYDL---G--CEASTYGDVYSFGILLLEMFTGIRP 359 (473)
Q Consensus 293 ~~~---~~kl~Dfg~~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~~DiwSlG~il~elltg~~P 359 (473)
+.. -+||+||.+..-.... .......+.+|+..|||||+.. + ..|+.++|.||||||+|-|++|.+|
T Consensus 211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence 544 5799999887543221 1233345678999999999743 2 3589999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCC
Q 012014 360 SDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRER 439 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 439 (473)
|.|..+.+-.+. .+.+-..-...+...+++|.-- -+...| ...+.+..+|+...+..||.+|
T Consensus 291 FvG~Cg~dCGWd-------rGe~Cr~CQ~~LFesIQEGkYe--------FPdkdW---ahIS~eakdlisnLlvrda~~r 352 (463)
T KOG0607|consen 291 FVGHCGADCGWD-------RGEVCRVCQNKLFESIQEGKYE--------FPDKDW---AHISSEAKDLISNLLVRDAKQR 352 (463)
T ss_pred ccCccCCcCCcc-------CCCccHHHHHHHHHHHhccCCc--------CChhhh---HHhhHHHHHHHHHHHhccHHhh
Confidence 998765442111 1111111111222222221100 000111 2356677788888889999999
Q ss_pred CChHHHHH
Q 012014 440 MKINDVES 447 (473)
Q Consensus 440 Pt~~ev~~ 447 (473)
.++.+++.
T Consensus 353 lsa~~vln 360 (463)
T KOG0607|consen 353 LSAAQVLN 360 (463)
T ss_pred hhhhhccC
Confidence 99988876
No 319
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-37 Score=297.56 Aligned_cols=248 Identities=18% Similarity=0.228 Sum_probs=192.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
....|...+.||+|+||.||+|.. .+++.||+|.+...... ....+.+|+.+++.++||||++++++|.+.
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~----- 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE----- 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC-----
Confidence 345688999999999999999984 46899999998643322 224678999999999999999999998653
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+. |+|.+++..... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+|
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~~~~--------~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEVHKK--------PLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHHccc--------CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEE
Confidence 35799999996 678777754321 2568889999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
|+|||++...... ....|++.|+|||++. ...++.++||||||+++|+|++|..||.+...... ..
T Consensus 156 L~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----~~ 224 (307)
T cd06607 156 LADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LY 224 (307)
T ss_pred EeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----HH
Confidence 9999998754322 1235788999999874 35688999999999999999999999865321110 00
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.......... .....+..+.+++.+||+.||++|||+.+|+..
T Consensus 225 ~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 225 HIAQNDSPTL------------------------------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHhcCCCCCC------------------------------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000 011245678999999999999999999999873
No 320
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.1e-38 Score=298.03 Aligned_cols=275 Identities=19% Similarity=0.237 Sum_probs=195.5
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|++.+.||.|++|.||+|. ..+|+.||+|++.... ......+.+|+.+++.++|||++++++++.+ ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-----~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-----ENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----CCeEEE
Confidence 6678899999999999998 4579999999987433 2233568899999999999999999999754 347899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||+ +++|.+++...... .+++..+..++.|++.||.||| +++++||||+|+||+++.++.++|+|||
T Consensus 76 v~e~~-~~~l~~~~~~~~~~-------~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~ 144 (283)
T cd07835 76 VFEFL-DLDLKKYMDSSPLT-------GLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFG 144 (283)
T ss_pred EEecc-CcCHHHHHhhCCCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecc
Confidence 99999 46999998765421 3568899999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++....... .......++..|+|||++.+. .++.++||||||+++|+|++|..||........ +....+.......
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 221 (283)
T cd07835 145 LARAFGVPV--RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDE 221 (283)
T ss_pred cccccCCCc--cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 997653321 111223468899999987664 578899999999999999999999975432111 1111111100000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...........+... . .. .............+..+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~--~---~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 222 DVWPGVTSLPDYKPT--F---PK--WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHhhhhhhchhhhhh--c---cc--ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000000 0 00 0000011112234567889999999999999999999874
No 321
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.7e-38 Score=292.53 Aligned_cols=244 Identities=17% Similarity=0.242 Sum_probs=186.7
Q ss_pred ccCCCCcccee--ecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLI--GAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~l--g~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 218 (473)
..++|++.+.+ |+|+||.||++. ..++..+|+|.+....... .|+.....+ +||||+++++.|...
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~----- 81 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTL----- 81 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecC-----
Confidence 34566666666 999999999998 4578899999986432211 122222222 799999999998653
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-cE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IG 297 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~~ 297 (473)
...++||||+++++|.+++.... .+++.++..++.|++.||.||| +.+++||||||+||+++.++ .+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG---------KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeE
Confidence 36899999999999999997653 3568999999999999999999 99999999999999999988 99
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
+|+|||++...... ....|+..|+|||++.+..++.++||||||+++|+|++|..||............+....
T Consensus 150 ~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T PHA03390 150 YLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ 223 (267)
T ss_pred EEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh
Confidence 99999998765322 123589999999999988899999999999999999999999985433322222221111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-hHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-INDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~ 447 (473)
.... ......+..+.+++.+||+.||.+||+ ++|+++
T Consensus 224 -~~~~--------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 -QKKL--------------------------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -cccC--------------------------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0000 001134567889999999999999996 588863
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.9e-38 Score=299.47 Aligned_cols=281 Identities=21% Similarity=0.228 Sum_probs=197.4
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
..++|++.+.||+|+||.||+|.. .+|+.||+|.++..... ....+.+|+.++.+++|+||+++++++.+.. ..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CC
Confidence 356899999999999999999994 56899999998743322 2335678999999999999999999986432 23
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+. ++|.+++..... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.+||
T Consensus 82 ~~~lv~e~~~-~~l~~~l~~~~~--------~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL 149 (309)
T cd07845 82 SIFLVMEYCE-QDLASLLDNMPT--------PFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKI 149 (309)
T ss_pred eEEEEEecCC-CCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 5799999995 589888875421 3668899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||....... .+...... .
T Consensus 150 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~-~ 225 (309)
T cd07845 150 ADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQL-L 225 (309)
T ss_pred CccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-c
Confidence 99999987644321 1122235788999999865 457899999999999999999999997532211 11111111 1
Q ss_pred CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
............ ........ ....... ..........+..+.+++.+||+.||++|||+.|++.
T Consensus 226 ~~~~~~~~~~~~--~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 226 GTPNESIWPGFS--DLPLVGKF--TLPKQPY-NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCChhhchhhh--cccccccc--cccCCCC-CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 100000000000 00000000 0000000 0000011123667789999999999999999999875
No 323
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=8.5e-38 Score=295.20 Aligned_cols=274 Identities=20% Similarity=0.247 Sum_probs=198.2
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
+|++.+.||.|++|.||+|+. .+++.||+|.++.... .....+.+|+.++++++||||+++++++.+. ...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEEE
Confidence 588899999999999999995 4689999999875432 2345678899999999999999999998653 36799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||++ ++|.+++...... ..+++..+..++.|++.||.||| +++++||||||+||++++++.++|+|||
T Consensus 76 v~e~~~-~~l~~~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g 145 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGVR------GALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFG 145 (284)
T ss_pred EEecCC-ccHHHHHHhcCCC------CCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecc
Confidence 999997 5899988754321 13668999999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc--
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ-- 380 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 380 (473)
++....... .......++..|+|||++.+. .++.++||||||+++|+|++|..||.+....+ .+..........
T Consensus 146 ~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 222 (284)
T cd07836 146 LARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTE 222 (284)
T ss_pred hhhhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCh
Confidence 997653321 112233478899999988664 47889999999999999999999997643321 111111111100
Q ss_pred -chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 -RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+... ..+. ..................+..+.+++.+||+.||.+|||+.||++
T Consensus 223 ~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 223 STWPGISQL---PEYK-------PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhHHHHhcC---chhc-------ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000 0000 000000000011122235678899999999999999999999874
No 324
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6e-38 Score=296.52 Aligned_cols=253 Identities=21% Similarity=0.259 Sum_probs=201.3
Q ss_pred cccCCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..++.|+..+.||+|+||.||+|... ++..+++|++..... ....+.+|++.+..++|+||+++++.+... ..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG-----DE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CE
Confidence 45677999999999999999999954 689999999975443 456788999999999999999999998653 46
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++++||+++++|.+++..... .+++..+..++.|++.||.||| +.|++|+||+|+||+++.++.++|+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~--------~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~ 158 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNFV--------RMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLA 158 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEEC
Confidence 8999999999999999987541 3568889999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++|..||....... .... ....
T Consensus 159 d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~----~~~~-~~~~ 231 (286)
T cd06614 159 DFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR----ALFL-ITTK 231 (286)
T ss_pred ccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH----HHHH-HHhc
Confidence 9999875543221 1223347889999999988889999999999999999999999986432111 0000 0000
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... ......+..+.+++.+||+.+|.+|||+.+|++
T Consensus 232 ~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 232 GIPPL-----------------------------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCCCC-----------------------------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00000 001124567889999999999999999999976
No 325
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.9e-38 Score=297.65 Aligned_cols=277 Identities=20% Similarity=0.231 Sum_probs=196.8
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.+.||+|+||.||+|.. .+++.+|+|.++.... .....+.+|+.++.+++||||+++++++...+ ....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 5788999999999999999995 4688999999974332 22335678999999999999999999886532 2578
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
++||||++ ++|.+++..... .+++.++..++.|++.||.||| +++++|+||||+||+++.++.+||+|
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d 149 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMKQ--------PFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICD 149 (293)
T ss_pred EEEehhcC-cCHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEee
Confidence 99999996 599998876432 3668999999999999999999 89999999999999999999999999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
||++....... .......+++.|+|||.+.+.. ++.++||||||+++|+|++|..||....... .+..........
T Consensus 150 ~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~ 226 (293)
T cd07843 150 FGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTP 226 (293)
T ss_pred cCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCC
Confidence 99998664432 1122344788999999987644 6899999999999999999999997643221 111111110000
Q ss_pred ---chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHH-HHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 ---RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILE-CFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....... ...... ..... ..........+.. ....+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~---~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 227 TEKIWPGFSE---LPGAKK--KTFTK---YPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chHHHHHhhc---cchhcc--ccccc---ccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000 000000 00000 0000000000001 3567889999999999999999999975
No 326
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.2e-38 Score=292.44 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=194.7
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-----CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-----PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.+|.+.+.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.++++++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 478999999999999999998 4568999999875321 122346889999999999999999999875422 3
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++++||+++++|.+++.... .+++.....++.|++.||.||| +++++|+||||+||+++.++.++
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~---------~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~ 146 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG---------ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVK 146 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEE
Confidence 45789999999999999987543 2457788899999999999999 99999999999999999999999
Q ss_pred EeecccccccCcccc-ccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDK-QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|||+++....... ........|+..|+|||++.+..++.++|+|||||++|+|++|..||...... .......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~ 222 (264)
T cd06653 147 LGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAIFKIA 222 (264)
T ss_pred ECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHHHHHH
Confidence 999999986533211 11122345889999999998888999999999999999999999999753111 1111100
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..... ...+......+.+++.+||+ +|..|||+.+++.
T Consensus 223 ~~~~~-------------------------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 TQPTK-------------------------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred cCCCC-------------------------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00000 00112345678899999999 5799999998864
No 327
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.4e-38 Score=301.23 Aligned_cols=257 Identities=22% Similarity=0.199 Sum_probs=189.0
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|.....||+|+||.||++. ..+++.+|+|.+..... .....+.+|+.++.++. ||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-----~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-----GDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-----CcE
Confidence 356677899999999999998 45689999999874332 23456889999999996 99999999987542 356
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEEEe
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+++|||+. ++|.++........ ...+++..+..++.|++.||+||| + .+++||||||+||+++.++.+||+
T Consensus 79 ~~~~e~~~-~~l~~l~~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~ 150 (288)
T cd06616 79 WICMELMD-ISLDKFYKYVYEVL----KSVIPEEILGKIAVATVKALNYLK---EELKIIHRDVKPSNILLDRNGNIKLC 150 (288)
T ss_pred EEEEeccc-CCHHHHHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh---hcCCeeccCCCHHHEEEccCCcEEEe
Confidence 89999985 46655432110000 013668889999999999999999 5 599999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCC---CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC---EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||++....... ......|+..|+|||++.+. .++.++||||||+++|+|++|..||..... ........
T Consensus 151 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~ 223 (288)
T cd06616 151 DFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQV 223 (288)
T ss_pred ecchhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhh
Confidence 999997654322 11223578999999998776 689999999999999999999999975321 01111111
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.......+. .......+..+.+|+.+||+.||++|||+.+|++.
T Consensus 224 ~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 224 VKGDPPILS---------------------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCCCcCC---------------------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00012356678999999999999999999998764
No 328
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.3e-38 Score=297.42 Aligned_cols=245 Identities=20% Similarity=0.268 Sum_probs=193.0
Q ss_pred ccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEe
Q 012014 149 SANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKF 227 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 227 (473)
...+||+|+||.||++.. .+++.||+|++..........+.+|+.+++.++|+||+++++.+... ...+++|||
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~ 98 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVMEF 98 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-----CEEEEEEec
Confidence 346799999999999984 57899999998654444556788999999999999999999998653 367999999
Q ss_pred cCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccc
Q 012014 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307 (473)
Q Consensus 228 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 307 (473)
+++++|.+++... .+++..+..++.|++.||+||| ++|++|+||+|+||+++.++.++|+|||++..
T Consensus 99 ~~~~~L~~~~~~~----------~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~ 165 (292)
T cd06657 99 LEGGALTDIVTHT----------RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 165 (292)
T ss_pred CCCCcHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEccccccee
Confidence 9999999987543 2457888999999999999999 89999999999999999999999999999876
Q ss_pred cCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhcc
Q 012014 308 LPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVD 387 (473)
Q Consensus 308 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (473)
..... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+..... .........+.....
T Consensus 166 ~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~--- 238 (292)
T cd06657 166 VSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPKLKN--- 238 (292)
T ss_pred ccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhhCCcccCC---
Confidence 54322 12233458899999999988889999999999999999999999997532110 011111111111000
Q ss_pred ccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 388 DFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+..+.+++.+||+.||.+||++.+|++
T Consensus 239 -----------------------------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 239 -----------------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -----------------------------cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0123456778999999999999999999887
No 329
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=290.13 Aligned_cols=272 Identities=21% Similarity=0.306 Sum_probs=208.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHh--cCCCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
...+..+.+.||+|.||+||+|.| .|+.||||+|.. .+...+.+|.+|.+. |+|+||+.+++.-.... .....
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQ 283 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQ 283 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEE
Confidence 445677889999999999999996 689999999974 345667788888765 59999999987743322 34556
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhh-----CCCCCeeeccCCCCcEEecCCc
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHC-----DCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-----~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
+|||++|.+.|||.|||... .++.+..++++..+|.||+|||. +....|.|||||+.|||+.+++
T Consensus 284 LwLvTdYHe~GSL~DyL~r~----------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN----------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred EEEeeecccCCcHHHHHhhc----------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 89999999999999999986 36688999999999999999994 2356799999999999999999
Q ss_pred cEEEeecccccccCccccc--cceeeccCCCCcCCCccccCCCC------CcccchhhHhHHHHHHHhC----------C
Q 012014 296 IGHVGDFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLGCEA------STYGDVYSFGILLLEMFTG----------I 357 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~------~~~~DiwSlG~il~elltg----------~ 357 (473)
.+-|+|+|+|......... ......+||-+|||||++..... -..+||||||.|+||++.+ +
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 9999999999766544221 22345679999999999865321 2347999999999999862 4
Q ss_pred CCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCC
Q 012014 358 RPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPR 437 (473)
Q Consensus 358 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 437 (473)
.||.+....+..+.++.....-.+....++.. | ...+....+.+||+.||..||.
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnr------------------------W-~s~~~l~~m~klMkeCW~~Np~ 488 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNR------------------------W-KSDPALRVMAKLMKECWYANPA 488 (513)
T ss_pred CCcccCCCCCCCHHHHhcceeecccCCCCCcc------------------------c-ccCHHHHHHHHHHHHhhcCCch
Confidence 78887766665555544332222222111110 0 1134677889999999999999
Q ss_pred CCCChHHHHHHHHHHHH
Q 012014 438 ERMKINDVESRLRLIRR 454 (473)
Q Consensus 438 ~RPt~~ev~~~L~~l~~ 454 (473)
-|.|+--|-+.|.++.+
T Consensus 489 aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 489 ARLTALRIKKTLAKLSN 505 (513)
T ss_pred hhhHHHHHHHHHHHHhc
Confidence 99999999999988864
No 330
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-37 Score=289.00 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=201.3
Q ss_pred CCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 4778899999999999999954 689999999875432 34567899999999999999999999986531 24679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+++||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+||
T Consensus 78 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~ 145 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG---------KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADF 145 (260)
T ss_pred EEEEecCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccc
Confidence 9999999999999997654 3568899999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|.+................++..|+|||.+.+...+.++||||||+++|+|++|..||....... ............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~ 222 (260)
T cd06606 146 GCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM---AALYKIGSSGEP 222 (260)
T ss_pred ccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHhccccCCC
Confidence 99987655432111233458899999999988889999999999999999999999997643111 000000000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+...+..+.+++.+||..||++|||+.|++.
T Consensus 223 -------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 -------------------------------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -------------------------------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0111233678899999999999999999999975
No 331
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.7e-37 Score=292.73 Aligned_cols=274 Identities=19% Similarity=0.225 Sum_probs=193.0
Q ss_pred CCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|++.+.||+|+||.||+|. ..+++.||+|+++... ........+|+.++.++. ||||+++++++.+. .....++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 5678899999999999998 4578999999987432 222234457888898885 99999999998653 1246799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||++ |+|.+++..... .+++.++..++.|++.||.||| +++++||||||+||+++. +.+||+|||
T Consensus 78 v~e~~~-~~l~~~l~~~~~--------~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg 144 (282)
T cd07831 78 VFELMD-MNLYELIKGRKR--------PLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFG 144 (282)
T ss_pred EEecCC-ccHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecc
Confidence 999996 588888865431 3568999999999999999999 899999999999999999 999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
+++....... .....++..|+|||.+.. ..++.++|||||||++|||++|..||.+....+ .+... ........
T Consensus 145 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~-~~~~~~~~ 219 (282)
T cd07831 145 SCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKI-HDVLGTPD 219 (282)
T ss_pred cccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHH-HHHcCCCC
Confidence 9986643221 122347889999997644 457889999999999999999999997643211 11111 11111111
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..+.. ........ ........+..........+..+.+|+.+||+.||++|||+.++++
T Consensus 220 ~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 220 AEVLK-----KFRKSRHM-NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHH-----hhcccccc-cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 11100 00000000 0000000011111222345789999999999999999999999875
No 332
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.5e-37 Score=292.35 Aligned_cols=275 Identities=20% Similarity=0.257 Sum_probs=199.0
Q ss_pred CCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC--CCchhHHHHHHHHHhc---CCCCceeeeeeeeccccCCcee
Q 012014 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP--GGSKSFKSECKAAINI---KHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 220 (473)
|++.+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.++.++ +||||+++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999954 589999999974322 2234566788777666 6999999999997765444445
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.+++|||+. ++|.+++...... .+++..+..++.|++.||.||| +++++|+||+|+||+++.++.+||+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~-------~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~ 149 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKP-------GLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIA 149 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCC-------CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEe
Confidence 899999996 5899988764321 3668899999999999999999 8999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||++........ .....++..|+|||++.+..++.++||||||+++|+|++|.+||.+....+ .+..+.......
T Consensus 150 dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 225 (287)
T cd07838 150 DFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLP 225 (287)
T ss_pred ccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCC
Confidence 9999977643221 122347889999999998889999999999999999999999987643221 122222111110
Q ss_pred chhhhccccc--hHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFN--LQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......... ...+ ...............+..+.+++.+||+.||.+||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 226 SEEEWPRNVSLPRSSF-----------PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ChHhcCCCcccchhhc-----------ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000 0000 000000111222345678899999999999999999999874
No 333
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.8e-38 Score=304.95 Aligned_cols=283 Identities=20% Similarity=0.269 Sum_probs=199.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeecc--CCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLI--RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 218 (473)
..++|.+.+.||+|+||.||+|.. .+++.+|+|++... .......+.+|+.++.++ +||||++++++|... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---ND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CC
Confidence 356799999999999999999984 46889999988532 222345577899999999 999999999987542 23
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||++ ++|.+++... .+.+..+..++.|++.||.||| ++||+||||||+||+++.++.+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~k 147 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN----------ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVK 147 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEE
Confidence 46799999996 5999998754 2447788889999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccc---cceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 299 VGDFGMARFLPAIDKQ---NRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
|+|||++......... .......||..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+...... .....
T Consensus 148 l~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~ 226 (337)
T cd07852 148 LADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKII 226 (337)
T ss_pred EeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence 9999999866443221 12233458999999998765 4578899999999999999999999976432211 11111
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
... .....+..... ..... ....... ...............+..+.+++.+||+.||++|||+.++++.
T Consensus 227 ~~~-~~~~~~~~~~~-~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 227 EVI-GPPSAEDIESI-KSPFA--ATMLDSL-PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHh-CCCCHHHHHHH-HhhhH--HHhhhhc-ccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 111 00000000000 00000 0000000 0000000111112256788999999999999999999999864
No 334
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.7e-38 Score=304.65 Aligned_cols=283 Identities=19% Similarity=0.248 Sum_probs=197.7
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccC------
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQ------ 216 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 216 (473)
.++|.+.+.||.|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 4789999999999999999998 456899999999766655667789999999999999999999887543211
Q ss_pred ---CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec-
Q 012014 217 ---GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD- 292 (473)
Q Consensus 217 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~- 292 (473)
.....++||||++ ++|.+++... .+++..+..++.||+.||.||| +.||+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----------~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~ 149 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG----------PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINT 149 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcC
Confidence 1135789999996 6999888643 2558889999999999999999 99999999999999997
Q ss_pred CCccEEEeecccccccCcccccc-ceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccH
Q 012014 293 DEMIGHVGDFGMARFLPAIDKQN-RFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNL 370 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~ 370 (473)
.++.+||+|||+++......... ......|+..|+|||.+.+ ..++.++|||||||++|+|++|..||.+...... .
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~ 228 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-M 228 (342)
T ss_pred CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence 45678999999997653321111 1122347889999998654 4588899999999999999999999975432111 1
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...... .+.......... .......... .......+ ..........++.+|+.+||+.||.+|||+.|++.
T Consensus 229 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 229 QLILES-VPVVREEDRNEL-LNVIPSFVRN--DGGEPRRP--LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHh-cCCCChHHhhhh-hhhhhhhhhh--cccccCCC--HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 111111 110000000000 0000000000 00000000 00111234567889999999999999999999974
No 335
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=313.42 Aligned_cols=256 Identities=24% Similarity=0.397 Sum_probs=210.8
Q ss_pred CCccceeecCCCeEEEEEEe-cCC----CEEEEEEeecc-CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDG----TTIAVKVFNLI-RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+..++||+|+||+||+|.| ..| -+||+|++... ......++..|+-+|.+++|||+++++++|... .
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------T 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------h
Confidence 45678999999999999984 333 47899998643 344567899999999999999999999998653 3
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
+.||++|++.|+|.+|++.++. .+-.+..+.|+.||++||.||| .++++||||-..|||+..-..+||.
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~--------~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkit 840 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD--------NIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKIT 840 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc--------cccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEE
Confidence 6899999999999999988764 2447888999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||+++.+.............-.+.|||-|.+....|+.++|||||||++||++| |..|++++...+.
T Consensus 841 dfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI----------- 909 (1177)
T KOG1025|consen 841 DFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI----------- 909 (1177)
T ss_pred ecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-----------
Confidence 9999999877665544444444678999999999999999999999999999999 9999988643321
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
.+++. .+.+ -+.++.|+.+++-++.+||..|+..||+++++.+.+..+-+.
T Consensus 910 ---~dlle--------~geR--------------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 910 ---PDLLE--------KGER--------------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ---hHHHh--------cccc--------------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 11111 1111 122345888999999999999999999999999999888543
No 336
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.3e-37 Score=293.79 Aligned_cols=276 Identities=20% Similarity=0.239 Sum_probs=193.7
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
++|++.+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 5788999999999999999984 4789999999864322 233568899999999999999999999854 3478
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccEEEe
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVG 300 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~kl~ 300 (473)
++||||++ ++|.+++...... .+++..+..++.||+.||.||| +++++||||+|+||+++. ++.+||+
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~ 145 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPDF-------AKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLA 145 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCCC-------CcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEc
Confidence 99999995 5888887654322 2457788899999999999999 899999999999999985 5679999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|||++....... .......|++.|+|||++.+. .++.++||||||+++|+|++|..||......+ .+........
T Consensus 146 dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~- 221 (294)
T PLN00009 146 DFGLARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILG- 221 (294)
T ss_pred ccccccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC-
Confidence 999997653321 112233468899999988664 57899999999999999999999997632211 1111111100
Q ss_pred cchhhhcccc-chHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDF-NLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......+.. ....+.... .. .............+..+.+++.+||+.||++||++.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 222 TPNEETWPGVTSLPDYKSAF------PK-WPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCChhhccccccchhhhhhc------cc-CCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000000 000000000 00 0000000111234567889999999999999999999986
No 337
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.1e-38 Score=302.27 Aligned_cols=287 Identities=17% Similarity=0.215 Sum_probs=208.0
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|.+.+.||.|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 588899999999999999995 458999999987533 33456789999999999999999999998665433345679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||++ ++|.+++.... .+++..+..++.|++.||.||| ++||+||||||+||+++.++.++|+||
T Consensus 81 lv~e~~~-~~l~~~l~~~~---------~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~df 147 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---------PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDF 147 (330)
T ss_pred EEecchh-hhHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccc
Confidence 9999996 58999987653 3668899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccc-cceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 303 GMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 303 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|++......... .......++..|+|||.+.+. .++.++||||||+++|+|++|..||.+....+. +..........
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~ 226 (330)
T cd07834 148 GLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTP 226 (330)
T ss_pred CceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCC
Confidence 999876543210 112334578899999999887 789999999999999999999999976542211 11111111000
Q ss_pred chhh---hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH--HHHHHH
Q 012014 381 RAEE---VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR--LRLIRR 454 (473)
Q Consensus 381 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~l~~ 454 (473)
.... ............ ................+..+.+++.+||+.||.+|||+.+++.. ++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 227 SEEDLKFITSEKARNYLKS--------LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ChhHhhhccccchhhHHhh--------cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000 000000000000 00000001111122356788999999999999999999999874 666543
No 338
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-37 Score=292.28 Aligned_cols=241 Identities=25% Similarity=0.297 Sum_probs=186.0
Q ss_pred eecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||+|+||+||+|. ..+|+.||+|.+.... ......+.+|+.+++.++||||+++++.+.. ....++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 6899999999998 4578999999986432 1223456789999999999999999998754 33679999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++...... .+++.++..++.|++.||.||| +++++||||+|+||++++++.+||+|||.+...
T Consensus 76 ~~~~L~~~l~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~ 145 (277)
T cd05577 76 NGGDLKYHIYNVGEP-------GFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVEL 145 (277)
T ss_pred CCCcHHHHHHHcCcC-------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhh
Confidence 999999999765421 3668899999999999999999 999999999999999999999999999998765
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.. ........|+..|+|||++.+..++.++||||||+++|+|++|..||........ ......... ...
T Consensus 146 ~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~~------ 214 (277)
T cd05577 146 KG---GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRTL-EMA------ 214 (277)
T ss_pred cc---CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhccc-ccc------
Confidence 43 1122234578899999999888899999999999999999999999975432110 000000000 000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
...+...+..+.+++.+||+.||.+||++.+
T Consensus 215 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 215 -------------------------VEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred -------------------------ccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 0001123567889999999999999994444
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.8e-37 Score=293.26 Aligned_cols=278 Identities=21% Similarity=0.261 Sum_probs=197.3
Q ss_pred CCccceeecCCCeEEEEEEec-CCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|.+.+.||+|+||.||+|... +++.+|+|++.... ......+.+|+.+++.++|||++++++++.... ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 567889999999999999854 58899999998653 333456889999999999999999999986531 347899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||++ ++|.+++..... .+++.+++.++.||+.||+||| +++++|+||+|+||++++++.+||+|||
T Consensus 78 v~e~~~-~~l~~~~~~~~~--------~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g 145 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPEV--------KFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFG 145 (287)
T ss_pred Eecccc-ccHHHHHhccCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEcccc
Confidence 999996 589998865521 3668899999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++........ .......++..|+|||.+.+ ..++.++||||||+++|+|++|..||...... ..+............
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~ 223 (287)
T cd07840 146 LARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTD 223 (287)
T ss_pred ceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCch
Confidence 9987644321 11223346888999998765 45789999999999999999999999764321 111111111110000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHH-HHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILE-CFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.............. ..... ............ ++..+.+++.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 224 ENWPGVSKLPWFEN-----LKPKK-PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhhhh-----ccccc-cchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000000000 00000 000000111112 3778999999999999999999999875
No 340
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.7e-37 Score=298.77 Aligned_cols=281 Identities=19% Similarity=0.237 Sum_probs=199.3
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 215 (473)
++...+++|++.+.||.|+||.||+|. ..+++.||+|++.... ......+.+|+.++..++||||++++++|...
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-- 81 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-- 81 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC--
Confidence 455678899999999999999999998 5578999999885322 22346788999999999999999999988532
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
....++++||+ +++|.+++.... ++...+..++.|++.||.||| +++|+||||+|+||+++.++
T Consensus 82 --~~~~~lv~e~~-~~~L~~~~~~~~----------~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~ 145 (328)
T cd07856 82 --LEDIYFVTELL-GTDLHRLLTSRP----------LEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENC 145 (328)
T ss_pred --CCcEEEEeehh-ccCHHHHHhcCC----------CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCC
Confidence 23578999998 679999886532 446777889999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 296 IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
.+||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|..||....... .... .
T Consensus 146 ~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~-~~~~-~ 218 (328)
T cd07856 146 DLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFSI-I 218 (328)
T ss_pred CEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-H
Confidence 9999999998754321 122347889999998766 568999999999999999999999997543211 1111 1
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.........++.............. .. ...............+..+.+++.+||+.+|++|||+.+++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 219 TDLLGTPPDDVINTICSENTLRFVQ---SL-PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhCCCCHHHHHhccchhhHHHHh---hc-cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111111111100000000000 00 0000000011112345788999999999999999999998654
No 341
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.9e-37 Score=285.03 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=198.8
Q ss_pred CCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 146 GFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
+|...+.||+|++|.||++... +++.+++|++..........+.+|+..++.++|||++++++++... ...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 4778899999999999999954 6899999999765444567899999999999999999999987543 467999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
+||+++++|.+++..... .+++..+..++.|++.||.||| .++++|+||+|+||+++.++.++|+|||.
T Consensus 76 ~e~~~~~~L~~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~ 144 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQ--------TLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGL 144 (253)
T ss_pred EecCCCCcHHHHHhhcCC--------CCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccc
Confidence 999999999999876531 3568889999999999999999 89999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
+........ .....|+..|+|||.+.+..++.++||||||+++|+|++|..||........ ... ........
T Consensus 145 ~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~-~~~~~~~~ 216 (253)
T cd05122 145 SAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA----LFK-IATNGPPG 216 (253)
T ss_pred ccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH----HHH-HHhcCCCC
Confidence 987654321 2334588999999999888899999999999999999999999975321110 000 00000000
Q ss_pred hccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 385 VVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 217 ~~~-----------------------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 217 LRN-----------------------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCc-----------------------------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 0112557889999999999999999999875
No 342
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.5e-37 Score=299.49 Aligned_cols=288 Identities=19% Similarity=0.235 Sum_probs=194.6
Q ss_pred ceeecC--CCeEEEEEEe-cCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAG--NFGSVYNGTL-FDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
..||+| +||+||++.. .+++.||+|++...... ..+.+.+|+.+++.++||||++++++|... ...++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG-----SWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC-----CceEEEE
Confidence 356666 9999999984 57999999998743322 235688999999999999999999998653 3679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+.+++|.+++...... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.++++||+.+
T Consensus 79 e~~~~~~l~~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~ 148 (328)
T cd08226 79 PFMAYGSANSLLKTYFPE-------GMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHL 148 (328)
T ss_pred ecccCCCHHHHHHhhccc-------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHH
Confidence 999999999998765422 3568888899999999999999 999999999999999999999999999865
Q ss_pred cccCccccccc-----eeeccCCCCcCCCccccCC--CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 306 RFLPAIDKQNR-----FICIKGSTGYIPPEYDLGC--EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 306 ~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
........... .....++..|+|||++.+. .++.++|||||||++|+|++|..||..................
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 149 YSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred hhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 43322111110 0112346679999998763 4789999999999999999999999764322111111000000
Q ss_pred --------CcchhhhccccchHHHHhhhhhhc----ccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 379 --------PQRAEEVVDDFNLQEIEEGRTMCM----EVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 379 --------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
+.......... .....+..... .................+...+.+|+.+||+.||++|||+.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQ--SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred CCccccccchhhhhhccch--hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 00000000000 00000000000 00000001112223345678899999999999999999999996
Q ss_pred H--HHHHHHHh
Q 012014 447 S--RLRLIRRK 455 (473)
Q Consensus 447 ~--~L~~l~~~ 455 (473)
+ .++.+++.
T Consensus 307 ~~~~~~~~~~~ 317 (328)
T cd08226 307 SHAFFKQVKEQ 317 (328)
T ss_pred hCHHHHHHHHh
Confidence 3 45555543
No 343
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.1e-37 Score=297.02 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=192.5
Q ss_pred CCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
..|...+.||+|+||.||+|. ..++..+|+|.+...... ....+.+|+++++.++|||++++++++.+. ..
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE-----HT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----Ce
Confidence 347788999999999999998 456899999998643222 234688899999999999999999998553 36
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.++||||++ |+|.+++..... .+++.++..++.|++.||.||| +++|+||||+|+||+++.++.+||+
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~ 167 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVHKK--------PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLA 167 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEe
Confidence 799999996 588887754321 3568899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||++...... ....|++.|+|||++. ...++.++|||||||++|+|++|..||........ +.......
T Consensus 168 dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~ 240 (317)
T cd06635 168 DFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNE 240 (317)
T ss_pred cCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhcc
Confidence 99998754321 2235889999999874 45688999999999999999999999865321110 11111000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
.+. ......+..+.+++.+||+.+|.+|||+.+|++.+-.+
T Consensus 241 ~~~----------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 241 SPT----------------------------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred CCC----------------------------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 000 00112445788999999999999999999999865443
No 344
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.1e-37 Score=288.96 Aligned_cols=242 Identities=24% Similarity=0.289 Sum_probs=189.8
Q ss_pred eecCCCeEEEEEEe-cCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||.|+||.||+|.. .+++.+|+|++..... ...+.+.+|+.+++.++||||+++++.+.+. ...+++|||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK-----KYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC-----CccEEEEecC
Confidence 69999999999994 4589999999874332 2345788999999999999999999987543 3679999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++.... .++...+..++.|++.||.||| +++++|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~~~~L~~~l~~~~---------~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~ 143 (262)
T cd05572 76 LGGELWTILRDRG---------LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKL 143 (262)
T ss_pred CCCcHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCccccc
Confidence 9999999997654 2557888999999999999999 899999999999999999999999999999876
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||........ ...... .+.
T Consensus 144 ~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~--------~~~ 209 (262)
T cd05572 144 KSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM---EIYNDI--------LKG 209 (262)
T ss_pred Cccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH---HHHHHH--------hcc
Confidence 4432 22234588999999999888899999999999999999999999976432111 110000 000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC-----hHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK-----INDVES 447 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 447 (473)
. .....+...+..+.+++.+||+.||++||| +.|+++
T Consensus 210 ~----------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 210 N----------------------GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred C----------------------CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0 000011123568899999999999999999 666554
No 345
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.4e-37 Score=298.10 Aligned_cols=279 Identities=19% Similarity=0.144 Sum_probs=190.7
Q ss_pred CccceeecCCCeEEEEEEecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 148 SSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
.+.+.+|.|+++.||++. .+++.||+|+++.. .......+.+|+.+++.++||||+++++++... ...+++|
T Consensus 5 ~i~~~~~~~~~v~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~ 78 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-----SELYVVS 78 (314)
T ss_pred hhhHhhcCCceEEEEEec-CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC-----CeEEEEE
Confidence 344445555565555554 47899999999754 233456789999999999999999999988543 3679999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++|+|.+++...... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||.+
T Consensus 79 e~~~~~~l~~~l~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~ 148 (314)
T cd08216 79 PLMAYGSCEDLLKTHFPE-------GLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYS 148 (314)
T ss_pred eccCCCCHHHHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccc
Confidence 999999999999765322 3557888899999999999999 999999999999999999999999999988
Q ss_pred cccCcccc-----ccceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 306 RFLPAIDK-----QNRFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 306 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
........ ........++..|+|||++.+ ..++.++|||||||++|+|++|..||.........+. ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~-~~~--- 224 (314)
T cd08216 149 VSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLE-KVR--- 224 (314)
T ss_pred eeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh---
Confidence 75532211 111123346788999999876 3588999999999999999999999976432221111 111
Q ss_pred CcchhhhccccchHHHHhhhhh--hcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 PQRAEEVVDDFNLQEIEEGRTM--CMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.....+++............. .......................+.+|+.+||+.||++|||++++++
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 225 -GTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred -ccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 111111110000000000000 00000000000111122334568899999999999999999999986
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.4e-37 Score=289.21 Aligned_cols=241 Identities=21% Similarity=0.245 Sum_probs=182.1
Q ss_pred eeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC---CchhHHHHHH---HHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 152 LIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG---GSKSFKSECK---AAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 152 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
+||+|+||.||+|. ..+++.||+|.+...... ....+..|.. .+....||||+++++++.+. ...++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-----DKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CEEEEE
Confidence 48999999999998 456899999998643221 1122344443 34445899999999887543 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+
T Consensus 76 ~e~~~g~~L~~~l~~~~---------~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~ 143 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG---------VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 143 (278)
T ss_pred EecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcC
Confidence 99999999999986543 3668999999999999999999 89999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchh
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAE 383 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 383 (473)
+....... .....|+..|+|||.+.++ .++.++||||+|+++|+|++|..||......... .........
T Consensus 144 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~~~~--- 214 (278)
T cd05606 144 ACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTM--- 214 (278)
T ss_pred ccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHhhcc---
Confidence 87553321 1234589999999998754 5899999999999999999999999764221110 000000000
Q ss_pred hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 384 EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
. ...+...+..+.+++.+||..||.+|| ++.++++
T Consensus 215 ---~--------------------------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 215 ---A--------------------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---C--------------------------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 0 000112356788999999999999999 8988874
No 347
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2e-37 Score=296.67 Aligned_cols=285 Identities=20% Similarity=0.204 Sum_probs=197.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcCCCCceeeeeeeecccc---CC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAFSGVDY---QG 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 217 (473)
.++|.+.++||+|+||.||+|. ..+++.+|+|++...... ....+.+|+++++.++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5789999999999999999999 446899999998643322 23467889999999999999999998755331 12
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++||||+. ++|...+..... .+++..+..++.|+++||.||| +++|+|+||||+||++++++.+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~--------~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~ 154 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSV--------KLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGIL 154 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcccc--------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCE
Confidence 346799999995 578777765321 3668999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccc---------cceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCc
Q 012014 298 HVGDFGMARFLPAIDKQ---------NRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~ 367 (473)
||+|||++......... .......|++.|+|||.+.+. .++.++||||||+++|+|++|.+||.+.....
T Consensus 155 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~ 234 (311)
T cd07866 155 KIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID 234 (311)
T ss_pred EECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999765432211 111234568889999987654 58899999999999999999999997643321
Q ss_pred ccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 368 MNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..................+...... ........................+.+++.+||+.||.+|||+.|++.
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 235 -QLHLIFKLCGTPTEETWPGWRSLPG------CEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred -HHHHHHHHhCCCChhhchhhhhccc------ccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111111100000000000000000 000000000000001111223467889999999999999999999874
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.7e-37 Score=294.46 Aligned_cols=282 Identities=20% Similarity=0.219 Sum_probs=197.7
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc-----
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD----- 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 214 (473)
..++|++.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 456899999999999999999995 468999999997533 223356778999999999999999999886533
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
.......++|+||+++ +|.+++..... .+++..+..++.|++.||.||| +.+|+|+||||+||+++++
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~ 152 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLV--------HFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNK 152 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCC
Confidence 0122368999999975 77777765421 3668999999999999999999 9999999999999999999
Q ss_pred ccEEEeecccccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
+.+||+|||++........ .......++..|+|||.+.+. .++.++|||||||++|+|++|++||...... ..+..+
T Consensus 153 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~ 230 (302)
T cd07864 153 GQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELI 230 (302)
T ss_pred CcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHH
Confidence 9999999999986644321 111223457889999987653 5788999999999999999999999753211 111111
Q ss_pred HHhh---cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 374 VKMA---LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 374 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... .+.....+......... . ...... . .........+..+.+++.+||+.||.+|||+.+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~-~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTM---K----PKKQYR-R-RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHhCCCChhhccccccccccccc---c----cccccc-c-chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 00000000000000000 0 000000 0 000011124678899999999999999999999875
No 349
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.4e-37 Score=285.75 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=199.7
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|.+.+.||.|+||.||++.. .++..+++|++..... .....+.+|+++++.++|||++++++.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 578889999999999999994 4689999999975433 3456788999999999999999999987543 4789
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+++||+++++|.+++...... ...+++.++..++.+++.||.||| +++++|+||+|+||+++.++.++|+||
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~ 147 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE-----GKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDF 147 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc-----CCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCc
Confidence 999999999999999765311 114678999999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++....... .......|++.|+|||...+..++.++|+||+|+++|+|++|..||..... ............
T Consensus 148 ~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~ 220 (258)
T cd08215 148 GISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQY 220 (258)
T ss_pred cceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCC
Confidence 9998664432 122234588899999999888899999999999999999999999865321 111111111000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. .+...+..+.+++.+||+.+|++|||+.|+++
T Consensus 221 ~~-------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 PP-------------------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CC-------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 01124567889999999999999999999975
No 350
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8e-38 Score=291.47 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=183.7
Q ss_pred ceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHH-HhcCCCCceeeeeeeeccccCCceeeEEEE
Q 012014 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAA-INIKHRNIVRVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 225 (473)
+.||+|+||.||+|.. .+++.||+|.+...... ....+..|..++ ...+|||++++++++.. ....+++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 5689999999999984 56899999998643221 112344454443 44589999999999854 34789999
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++
T Consensus 77 e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 144 (260)
T cd05611 77 EYLNGGDCASLIKTLG---------GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLS 144 (260)
T ss_pred eccCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccc
Confidence 9999999999997653 2558888999999999999999 899999999999999999999999999998
Q ss_pred cccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhh
Q 012014 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEV 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (473)
..... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||....... ...........
T Consensus 145 ~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~-- 211 (260)
T cd05611 145 RNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-----VFDNILSRRIN-- 211 (260)
T ss_pred eeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-----HHHHHHhcccC--
Confidence 75432 123457889999999988888999999999999999999999997532211 11000000000
Q ss_pred ccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHH
Q 012014 386 VDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRL 449 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 449 (473)
........++..+.+++.+||+.||++|||+.++.+.|
T Consensus 212 --------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 212 --------------------------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --------------------------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 00001113467889999999999999999887665543
No 351
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-37 Score=299.72 Aligned_cols=283 Identities=18% Similarity=0.247 Sum_probs=198.3
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 219 (473)
.++|...+.||+|+||.||+|. ..+++.||+|++.... ......+.+|+.++..++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 4789999999999999999998 4578999999986432 2223467899999999999999999999865432 1223
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++|+||+. .+|..++.. .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~-----------~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL 158 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH-----------PLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKI 158 (342)
T ss_pred eEEEEecccc-cCHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 5689999995 478776532 2557889999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
+|||+++..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+..... .+........
T Consensus 159 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~ 232 (342)
T cd07879 159 LDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTG 232 (342)
T ss_pred eeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 999998754321 122347889999999876 458899999999999999999999997532111 1111111100
Q ss_pred -C-cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH--HHHHHHH
Q 012014 379 -P-QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES--RLRLIRR 454 (473)
Q Consensus 379 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~l~~ 454 (473)
+ ....+............. . +..............+..+.+|+.+||+.||.+|||+.|++. .++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 233 VPGPEFVQKLEDKAAKSYIKS------L-PKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CCCHHHHHHhcccchHHHHhh------c-CCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0 000011110000000000 0 000000000011124567889999999999999999999984 4766653
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4e-37 Score=285.51 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=197.5
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|++|.||++.. .+++.|++|.+..... .....+.+|++++.+++|||++++++++.+ ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-----SDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-----CCEEE
Confidence 478889999999999999984 4678999999975443 344678999999999999999999998754 34689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||+++++|.+++.... .+++..+..++.|++.||.||| ++|++||||+|+||+++.++.++|+||
T Consensus 76 ~v~e~~~~~~L~~~~~~~~---------~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~ 143 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG---------PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADF 143 (254)
T ss_pred EEEecCCCCcHHHHHHhcc---------CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEecc
Confidence 9999999999999987653 3568899999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++......... .....|+..|+|||...+..++.++||||||+++|+|++|..||...... ....... ....
T Consensus 144 ~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~-~~~~ 216 (254)
T cd06627 144 GVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIV-QDDH 216 (254)
T ss_pred ccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHh-ccCC
Confidence 999876543321 22345789999999998888899999999999999999999999753211 1111000 0000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+...+..+.+++.+||+.+|++|||+.+++.
T Consensus 217 -------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 -------------------------------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -------------------------------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0001123567889999999999999999999874
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.3e-37 Score=290.93 Aligned_cols=275 Identities=20% Similarity=0.256 Sum_probs=198.6
Q ss_pred CCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|++.+.||+|++|.||+|.. .+++.+++|.++.... .....+.+|+.++++++||||+++++++... ...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 56778999999999999984 5789999999874332 2346788999999999999999999997543 46899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
++||+++ +|.+++..... .+++..+..++.|++.||.||| +++|+|+||||+||+++.++.+||+|||
T Consensus 76 v~e~~~~-~l~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~ 143 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQR--------GLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFG 143 (283)
T ss_pred EEeccCC-CHHHHHHhhcc--------cCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeee
Confidence 9999964 89888876431 3568899999999999999999 9999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
.+....... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+ .+......... ..
T Consensus 144 ~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~-~~ 219 (283)
T cd05118 144 LARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGT-PD 219 (283)
T ss_pred eeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCC-Cc
Confidence 997765432 112234578899999998776 68999999999999999999999997543211 11111111100 00
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
........ ..... ....................+.++.+++.+||+.||.+||++.+++.
T Consensus 220 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 220 PEVWPKFT-SLARN----YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hHhcccch-hhhhh----hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000 00000 00000000011112223456789999999999999999999999875
No 354
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=324.94 Aligned_cols=207 Identities=28% Similarity=0.356 Sum_probs=180.5
Q ss_pred hhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeec---cCCCCchhHHHHHHHHHhcCCCCceeeeeeeecc
Q 012014 138 KDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV 213 (473)
Q Consensus 138 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 213 (473)
.++....++|.+.++||+|+||.|..++ ..+++.||+|++++ ........|..|-.+|..-+.+-|++++..|.+
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD- 146 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD- 146 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC-
Confidence 3455567899999999999999999999 56789999999986 334456678999999999999999999988744
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
..++|+||||++||+|..++.... .+++.-+..++..|+.||.-|| +.|+|||||||+|||+|.
T Consensus 147 ----~~~LYlVMdY~pGGDlltLlSk~~---------~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~ 210 (1317)
T KOG0612|consen 147 ----ERYLYLVMDYMPGGDLLTLLSKFD---------RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDK 210 (1317)
T ss_pred ----ccceEEEEecccCchHHHHHhhcC---------CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecc
Confidence 558999999999999999998775 3668888899999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCcccc----C-CCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL----G-CEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
.|++||+|||.+-.+...+ .-.....+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||..
T Consensus 211 ~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 211 SGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred cCcEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 9999999999998776543 44556678999999999875 2 5699999999999999999999999974
No 355
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.5e-37 Score=298.58 Aligned_cols=285 Identities=16% Similarity=0.210 Sum_probs=201.3
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeecccc-C
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-Q 216 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 216 (473)
....++|++.+.||+|+||.||+|. ..+++.||+|++..... .....+.+|+.+++.++||||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 3356789999999999999999998 55789999999864221 123467899999999999999999998864331 1
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
.....++||||+ +++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~----------~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~ 156 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE----------KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCE 156 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCC
Confidence 123468999999 78999988643 3568899999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
+||+|||++...... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||.+..... .+.....
T Consensus 157 ~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~ 230 (343)
T cd07880 157 LKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMK 230 (343)
T ss_pred EEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999999999765321 123357889999999876 458899999999999999999999997542211 1111111
Q ss_pred hhcC--cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH--HHHHH
Q 012014 376 MALP--QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE--SRLRL 451 (473)
Q Consensus 376 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~--~~L~~ 451 (473)
.... ......+.......+.. ...... ..............+.+++.+|++.||++|||+.+++ ..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 231 VTGTPSKEFVQKLQSEDAKNYVK------KLPRFR-KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred hcCCCCHHHHHhhcchhHHHHHH------hccccC-cchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 1100 00111111000000000 000000 0000111123456788999999999999999999998 34444
Q ss_pred H
Q 012014 452 I 452 (473)
Q Consensus 452 l 452 (473)
.
T Consensus 304 ~ 304 (343)
T cd07880 304 F 304 (343)
T ss_pred h
Confidence 3
No 356
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.8e-37 Score=296.51 Aligned_cols=282 Identities=18% Similarity=0.194 Sum_probs=193.9
Q ss_pred CCCccceeecCCCeEEEEEEe-cC--CCEEEEEEeeccC--CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FD--GTTIAVKVFNLIR--PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|.+.+.||+|+||.||++.. .+ +..||+|++.... ......+.+|+.++.++ +||||+++++.+.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 477889999999999999994 34 7799999986422 12245678899999999 5999999998754321 2234
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..+++++|+. ++|.+++.... .+++..+..++.||+.||.||| ++|++||||||+||+++.++.+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl 146 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ---------PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKI 146 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEe
Confidence 5788999985 79999986543 3568899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccc--cceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 300 GDFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
+|||+++........ .......||..|+|||++.+ ..++.++||||||+++|+|++|..||.+.... ..+......
T Consensus 147 ~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~ 225 (332)
T cd07857 147 CDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQV 225 (332)
T ss_pred CcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHH
Confidence 999999865432211 11223468999999998765 46899999999999999999999999753221 111111111
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. ....+................ ..... ..............+.+++.+||+.||++|||+.|++.
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 226 LG-TPDEETLSRIGSPKAQNYIRS---LPNIP-KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hC-CCCHHHHHhhhhhhHHHHHHh---ccccC-CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 10 000111110000000000000 00000 00000011123567889999999999999999999864
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=297.69 Aligned_cols=277 Identities=18% Similarity=0.243 Sum_probs=194.6
Q ss_pred cCCCCc-cceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCC--------------chhHHHHHHHHHhcCCCCceeee
Q 012014 144 TNGFSS-ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG--------------SKSFKSECKAAINIKHRNIVRVF 207 (473)
Q Consensus 144 ~~~~~~-~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 207 (473)
.++|.. .+.||.|+||.||+|. ..+++.||+|.++...... ...+.+|+.++..++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456654 5779999999999998 4578999999986432221 12477899999999999999999
Q ss_pred eeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 012014 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287 (473)
Q Consensus 208 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 287 (473)
+++... ...+++|||+. |+|.+++.... .+++.....++.|++.||.||| +++++|+||+|+
T Consensus 87 ~~~~~~-----~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~ 148 (335)
T PTZ00024 87 DVYVEG-----DFINLVMDIMA-SDLKKVVDRKI---------RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPA 148 (335)
T ss_pred EEEecC-----CcEEEEEeccc-cCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHH
Confidence 998543 46799999996 69999986543 3568889999999999999999 999999999999
Q ss_pred cEEecCCccEEEeecccccccCccc------------cccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHH
Q 012014 288 NVLLDDEMIGHVGDFGMARFLPAID------------KQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMF 354 (473)
Q Consensus 288 Nil~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell 354 (473)
||+++.++.+||+|||++....... .........+++.|+|||.+.+. .++.++|||||||++|+|+
T Consensus 149 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~ 228 (335)
T PTZ00024 149 NIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL 228 (335)
T ss_pred HeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999997654111 01112223468889999998764 4789999999999999999
Q ss_pred hCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccC
Q 012014 355 TGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAE 434 (473)
Q Consensus 355 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 434 (473)
+|..||.+....+. +....................... ... ................+..+.+++.+||+.
T Consensus 229 tg~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 299 (335)
T PTZ00024 229 TGKPLFPGENEIDQ-LGRIFELLGTPNEDNWPQAKKLPL------YTE--FTPRKPKDLKTIFPNASDDAIDLLQSLLKL 299 (335)
T ss_pred hCCCCCCCCCHHHH-HHHHHHHhCCCchhhCcchhhccc------ccc--cCcCCcccHHHhCcCCChHHHHHHHHHcCC
Confidence 99999976432211 111111110000000000000000 000 000000011111223467788999999999
Q ss_pred CCCCCCChHHHHH
Q 012014 435 RPRERMKINDVES 447 (473)
Q Consensus 435 dP~~RPt~~ev~~ 447 (473)
||++|||+.|++.
T Consensus 300 ~P~~R~s~~~~l~ 312 (335)
T PTZ00024 300 NPLERISAKEALK 312 (335)
T ss_pred CchhccCHHHHhc
Confidence 9999999999975
No 358
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.4e-37 Score=293.87 Aligned_cols=253 Identities=22% Similarity=0.277 Sum_probs=189.6
Q ss_pred ccCCCCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCce
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 219 (473)
..++|.+.+.||+|+||.||+|... +++.||||.++.... .....+..|+.++.+. .||||+++++++.+ ..
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~ 87 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----DS 87 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----CC
Confidence 3467899999999999999999954 489999999875332 2334566777777666 49999999999854 33
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCcEEecCCccEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
..+++|||+ +++|.+++..... .+++..+..++.|++.||.||| + .+|+||||+|+||++++++.+|
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~~--------~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~k 155 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQG--------PIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVK 155 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEE
Confidence 689999998 4578777755321 3568888999999999999999 6 5999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCC----CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE----ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
|+|||++..+..... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.........+....
T Consensus 156 L~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 232 (296)
T cd06618 156 LCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232 (296)
T ss_pred ECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh
Confidence 999999876543221 12234788999999987553 78899999999999999999999964211111011100
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. ....... ....++.++.+|+.+||+.||++|||+.++++.
T Consensus 233 ~----~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 233 Q----EEPPSLP-----------------------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred c----CCCCCCC-----------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000000 000235578899999999999999999999754
No 359
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.9e-38 Score=279.22 Aligned_cols=207 Identities=22% Similarity=0.281 Sum_probs=170.2
Q ss_pred CCCCccceeecCCCeEEEEEEec---C--CCEEEEEEeeccCC--CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLF---D--GTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
..|+.+..||+|.||.||+|... + .+.+|+|.++..+. +-.....+|+.+++.++|||++.+..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---- 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence 46888999999999999999622 2 23789999985432 3345678999999999999999999998653
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC---
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE--- 294 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~--- 294 (473)
...+++++||.+. +|...|+-+.....+ .++......|+.||+.|+.||| ++-|+||||||.|||+..+
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~----~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAK----QLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhc----cCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCc
Confidence 4578999999965 999999877654332 4557778899999999999999 8999999999999999877
Q ss_pred -ccEEEeecccccccCcccccc-ceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 295 -MIGHVGDFGMARFLPAIDKQN-RFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 295 -~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
|.+||+|||+++.+...-... .....+-|..|.|||.+.|.. |+.+.||||.|||+.||+|-.+-|.+.
T Consensus 172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 899999999999876543221 233445699999999998865 899999999999999999999988764
No 360
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=9.1e-38 Score=291.65 Aligned_cols=246 Identities=23% Similarity=0.330 Sum_probs=190.3
Q ss_pred eecCCCeEEEEEEec-CCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGTLF-DGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||.|+||.||++... +++.+++|.+..... .....+.+|++++.+++||||+++++.+.. ....+++|||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 689999999999954 589999999864332 344578899999999999999999988743 34689999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++.... .+++..+..++.|++.||.||| +++++|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 76 PGGDLASLLENVG---------SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred CCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence 9999999997643 3568899999999999999999 999999999999999999999999999998754
Q ss_pred Ccccc------ccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 309 PAIDK------QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 309 ~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
..... ........++..|+|||...+...+.++||||||+++|+|++|..||...... ...........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 218 (265)
T cd05579 144 LVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNGKI 218 (265)
T ss_pred ccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCc
Confidence 33211 11223345788999999998888999999999999999999999999753211 11100000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
.+......+..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 219 ------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 ------------------------------EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ------------------------------CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00000012567889999999999999999966655443
No 361
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=286.10 Aligned_cols=205 Identities=24% Similarity=0.274 Sum_probs=174.7
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc---CCCCchhHHHHHHHHHhc-CCCCceeeeeeeecccc
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI---RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDY 215 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 215 (473)
.....+|....+||+|+||.|.+|. ..+.+.+|||++++. ...+.+--..|-++|... +.|.+++++.+|...+
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD- 423 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD- 423 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh-
Confidence 3445689999999999999999998 445788999999742 234445556788887766 5789999999986554
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM 295 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~ 295 (473)
.+|+||||+.||+|--+++.-+. |-+..+.-++.+|+-||-+|| ++|||.||||.+||++|.+|
T Consensus 424 ----RLyFVMEyvnGGDLMyhiQQ~Gk---------FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eG 487 (683)
T KOG0696|consen 424 ----RLYFVMEYVNGGDLMYHIQQVGK---------FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEG 487 (683)
T ss_pred ----heeeEEEEecCchhhhHHHHhcc---------cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCC
Confidence 78999999999999999987763 446778889999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCC
Q 012014 296 IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF 364 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 364 (473)
++||+|||+++.-- -......+.+|||.|+|||++...+|+.++|+|||||+||||+.|++||++..
T Consensus 488 HiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 488 HIKIADFGMCKENI--FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred ceEeeecccccccc--cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999998532 23445667889999999999999999999999999999999999999999843
No 362
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.5e-37 Score=284.99 Aligned_cols=249 Identities=22% Similarity=0.276 Sum_probs=197.4
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|++.+.||+|+||.||++. ..+++.+|+|.+.... ......+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 57888999999999999998 4578899999987432 22345678899999999999999999987543 4689
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+++++|.+++...... ...+++..+..++.|++.||.||| +.|++|+||+|+||+++.++.+||+||
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~ 147 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK-----RKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDL 147 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeec
Confidence 999999999999998763211 113568889999999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
|++...... ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...... ...........
T Consensus 148 g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 218 (256)
T cd08530 148 GISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKVQRGKY 218 (256)
T ss_pred cchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCC
Confidence 999876543 122345788999999999888999999999999999999999999753211 11100000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
...+...+..+.+++.+||+.+|++|||+.|+++
T Consensus 219 -------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 -------------------------------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -------------------------------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0011234567899999999999999999999875
No 363
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.2e-37 Score=290.43 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=195.2
Q ss_pred CCCccceeecCCCeEEEEEEe----cCCCEEEEEEeeccC----CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccC
Q 012014 146 GFSSANLIGAGNFGSVYNGTL----FDGTTIAVKVFNLIR----PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 216 (473)
+|.+.+.||+|+||.||+++. .+++.||+|.++... ....+.+.+|+.++.++ +||||+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 477889999999999999873 356889999987432 22345678999999999 59999999988743
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
....++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~ 143 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQRE---------HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGH 143 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcC---------CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCC
Confidence 346799999999999999987543 3557888999999999999999 899999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCCC--CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE--ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
++|+|||+++...... ........|+..|+|||.+.+.. .+.++||||||+++|+|++|..||...... .....+.
T Consensus 144 ~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~ 221 (288)
T cd05583 144 VVLTDFGLSKEFLAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEIS 221 (288)
T ss_pred EEEEECcccccccccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHH
Confidence 9999999987654322 11222345899999999987654 788999999999999999999998642111 1111111
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
....... ...+...+..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 222 ~~~~~~~--------------------------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 222 RRILKSK--------------------------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHccC--------------------------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1100000 000112345778999999999999999999887776654
No 364
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.1e-37 Score=298.31 Aligned_cols=284 Identities=17% Similarity=0.230 Sum_probs=200.6
Q ss_pred hhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 138 KDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 138 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
.++...+++|.+.+.||+|+||.||+|. ..+++.||+|+++... ....+.+.+|+.++.+++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 4456677899999999999999999998 4578999999986432 122456788999999999999999999875432
Q ss_pred c-CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 215 Y-QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 215 ~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
. ......+++++++ +++|.+++... .+++..+..++.|++.||.||| +++|+||||||+||+++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~----------~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ----------KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 155 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcC
Confidence 1 1223468888887 88999888653 2558889999999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHH
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRN 372 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~ 372 (473)
++.+||+|||++..... ......|+..|+|||.+.+ ..++.++|||||||++|+|++|..||...... ..+..
T Consensus 156 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~ 229 (345)
T cd07877 156 DCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKL 229 (345)
T ss_pred CCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 99999999999875432 1223457899999998866 46889999999999999999999999653221 11222
Q ss_pred HHHhhc--CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 373 FVKMAL--PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 373 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
...... +......+.......+.. ...... . ..........+..+.+++.+||+.||.+|||+.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~-~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 230 ILRLVGTPGAELLKKISSESARNYIQ---SLTQMP---K-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHhCCCCHHHHhhcccHhHHHHHH---HhcccC---C-cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 211111 001100011000000000 000000 0 00000001235578899999999999999999998764
No 365
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-36 Score=287.84 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=190.8
Q ss_pred CCCccceeecCCCeEEEEEEe----cCCCEEEEEEeeccC----CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccC
Q 012014 146 GFSSANLIGAGNFGSVYNGTL----FDGTTIAVKVFNLIR----PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 216 (473)
+|++.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|+.++.++ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 478889999999999999984 368999999987432 22345678899999999 59999999988754
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCcc
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~ 296 (473)
....++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~ 143 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRE---------RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGH 143 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCC
Confidence 346789999999999999997653 2557888889999999999999 999999999999999999999
Q ss_pred EEEeecccccccCccccccceeeccCCCCcCCCccccCC--CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC--EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
+||+|||++....... ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||...... .....+.
T Consensus 144 ~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~ 221 (290)
T cd05613 144 VVLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEIS 221 (290)
T ss_pred EEEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHH
Confidence 9999999997654322 1122234589999999998753 4678999999999999999999998642111 1111111
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC-----ChHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM-----KINDVES 447 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 447 (473)
........ ..+...+..+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~~~~~~--------------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 222 RRILKSEP--------------------------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHhhccCC--------------------------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11000000 00112345778999999999999997 5666654
No 366
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=316.18 Aligned_cols=271 Identities=27% Similarity=0.371 Sum_probs=209.9
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEEec----C----CCEEEEEEeeccCC-CCchhHHHHHHHHHhc-CCCCceeeee
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGTLF----D----GTTIAVKVFNLIRP-GGSKSFKSECKAAINI-KHRNIVRVFT 208 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~ 208 (473)
.++...++..+.+.||+|.||.|++|... . ...||||.++.... ...+.+..|+++|..+ .||||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45555666677789999999999999732 1 45799999874332 3456799999999999 5999999999
Q ss_pred eeeccccCCceeeEEEEEecCCCCHHHHhcCCC-CCCCCCc----c--hhhcHHHHHHHHHHHHHHHHHHhhCCCCCeee
Q 012014 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD-DTNWRPL----N--FNFLIKKKLDIAIDVACALRYLHCDCQPPIAH 281 (473)
Q Consensus 209 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~----~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH 281 (473)
+|.. ....++|+||+..|+|.++++..+ ....... . ..++..+.+.++.|||.|++||+ +.++||
T Consensus 370 ~~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vH 441 (609)
T KOG0200|consen 370 ACTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVH 441 (609)
T ss_pred eecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccc
Confidence 9865 346799999999999999998877 1110000 0 13778999999999999999999 999999
Q ss_pred ccCCCCcEEecCCccEEEeecccccccCccccccceeeccC--CCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCC
Q 012014 282 CNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG--STGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358 (473)
Q Consensus 282 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~ 358 (473)
|||-..|||+..+..+||+|||+|+......... .....| ...|||||.+....|+.+||||||||+|||++| |..
T Consensus 442 RDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 442 RDLAARNVLITKNKVIKIADFGLARDHYNKDYYR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhhhhhhEEecCCCEEEEccccceeccCCCCceE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 9999999999999999999999998654433221 111122 334999999999999999999999999999999 999
Q ss_pred CCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCC
Q 012014 359 PSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRE 438 (473)
Q Consensus 359 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 438 (473)
||.+...... +.+ .+..|.++ +.+..|..+++++|..||+.+|++
T Consensus 521 PYp~~~~~~~-l~~--------------------~l~~G~r~--------------~~P~~c~~eiY~iM~~CW~~~p~~ 565 (609)
T KOG0200|consen 521 PYPGIPPTEE-LLE--------------------FLKEGNRM--------------EQPEHCSDEIYDLMKSCWNADPED 565 (609)
T ss_pred CCCCCCcHHH-HHH--------------------HHhcCCCC--------------CCCCCCCHHHHHHHHHHhCCCccc
Confidence 9976321111 111 11122211 234567889999999999999999
Q ss_pred CCChHHHHHHHHHHH
Q 012014 439 RMKINDVESRLRLIR 453 (473)
Q Consensus 439 RPt~~ev~~~L~~l~ 453 (473)
||++.++.+.++.+.
T Consensus 566 RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 566 RPTFSECVEFFEKHL 580 (609)
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999964
No 367
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.2e-37 Score=292.13 Aligned_cols=250 Identities=19% Similarity=0.247 Sum_probs=191.4
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC---CCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
..+.|...+.||+|+||.||+|+ ..+++.+|+|.+..... .....+.+|+.+++.++|+|++++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----- 87 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----
Confidence 34457788899999999999999 45688999999864222 2234577899999999999999999998653
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...++||||+. |+|.+++..... .+++.++..++.|++.||.||| +++++||||||+||+++.++.+|
T Consensus 88 ~~~~lv~e~~~-~~l~~~~~~~~~--------~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~k 155 (308)
T cd06634 88 HTAWLVMEYCL-GSASDLLEVHKK--------PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155 (308)
T ss_pred CeeEEEEEccC-CCHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEE
Confidence 36799999996 688887754321 2558888999999999999999 89999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVK 375 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~ 375 (473)
|+|||++...... ....|++.|+|||.+. ...++.++|||||||++|+|++|..||........ ......
T Consensus 156 l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~ 228 (308)
T cd06634 156 LGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQ 228 (308)
T ss_pred ECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HHHHhh
Confidence 9999998765321 2235789999999874 34678899999999999999999999865321110 000000
Q ss_pred hhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 376 MALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
...+. ......+..+.+|+.+||+.+|++|||+.+|++.-.
T Consensus 229 ~~~~~----------------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 229 NESPA----------------------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred cCCCC----------------------------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 00000 001124567889999999999999999999986543
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.3e-37 Score=297.41 Aligned_cols=281 Identities=16% Similarity=0.249 Sum_probs=198.9
Q ss_pred cccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QG 217 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 217 (473)
...++|.+...||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++...+. ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3467899999999999999999994 468899999986432 2233557789999999999999999988754432 22
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++|+||+ +++|.+++... .+++..+..++.|++.||.||| +.||+||||||+||+++.++.+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~ 157 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----------KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCEL 157 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCE
Confidence 33579999999 67999998753 3568899999999999999999 8999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKM 376 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~ 376 (473)
||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+..... .+......
T Consensus 158 kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~ 231 (343)
T cd07851 158 KILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNL 231 (343)
T ss_pred EEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHh
Confidence 99999999865332 223357889999998765 367899999999999999999999997532211 11111111
Q ss_pred hcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 377 ALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......+........... ....... .............+..+.+++.+||+.||++|||+.||++
T Consensus 232 -~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 232 -VGTPDEELLQKISSESARN---YIQSLPQ-MPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred -cCCCCHHHHhhccchhHHH---HHHhccc-cCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 1111111111110000000 0000000 0000000111123678899999999999999999999875
No 369
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-36 Score=290.84 Aligned_cols=244 Identities=22% Similarity=0.253 Sum_probs=187.4
Q ss_pred CCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
|...+.||+|+||.||+|+. .+++.|++|.+...... ....+.+|+.+++.++|||++++++++.+. ...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 55667899999999999984 56899999998743322 224578899999999999999999998653 3679
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+||||+. |+|.+++..... .+++.++..++.|++.||.||| ++|++|+||+|+||+++.++.+||+||
T Consensus 98 lv~e~~~-~~l~~~l~~~~~--------~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~df 165 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKK--------PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADF 165 (313)
T ss_pred EEEecCC-CCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeec
Confidence 9999995 688887764321 2558889999999999999999 899999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCcccc---CCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDL---GCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
|++..... .....|+..|+|||++. ...++.++||||||+++|+|++|..||........ .........+
T Consensus 166 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~ 238 (313)
T cd06633 166 GSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNDSP 238 (313)
T ss_pred CCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhcCCC
Confidence 99864321 12345889999999974 45688899999999999999999999875322111 0000000000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
... ....+..+.+|+.+||+.+|.+|||+.+++..
T Consensus 239 ----~~~------------------------------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 ----TLQ------------------------------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ----CCC------------------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 01123467889999999999999999999853
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.3e-37 Score=291.50 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=197.2
Q ss_pred CCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCce
Q 012014 145 NGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 219 (473)
++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++.+++ ||||+++++++.+ ..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-----EE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-----Cc
Confidence 4788999999999999999984 478999999986422 223456889999999998 9999999998754 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l 143 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG---------SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKI 143 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEe
Confidence 6899999999999999997654 3668899999999999999999 999999999999999999999999
Q ss_pred eecccccccCccccc------------------cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCC
Q 012014 300 GDFGMARFLPAIDKQ------------------NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~ 361 (473)
+|||++......... .......|+..|+|||...+..++.++||||||++++++++|..||.
T Consensus 144 ~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 223 (280)
T cd05581 144 TDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR 223 (280)
T ss_pred cCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 999999866443211 22233457889999999988889999999999999999999999997
Q ss_pred CCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 362 GIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
...... .+.... .. ....+...+..+.+++.+||+.||.+|||
T Consensus 224 ~~~~~~-~~~~~~----~~--------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 266 (280)
T cd05581 224 GSNEYL-TFQKIL----KL--------------------------------EYSFPPNFPPDAKDLIEKLLVLDPQDRLG 266 (280)
T ss_pred CccHHH-HHHHHH----hc--------------------------------CCCCCCccCHHHHHHHHHHhcCCHhhCCC
Confidence 542110 000000 00 00011123567889999999999999999
Q ss_pred h----HHHHH
Q 012014 442 I----NDVES 447 (473)
Q Consensus 442 ~----~ev~~ 447 (473)
+ .+++.
T Consensus 267 ~~~~~~~ll~ 276 (280)
T cd05581 267 VNEGYDELKA 276 (280)
T ss_pred cccCHHHHhc
Confidence 9 66653
No 371
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=9.8e-37 Score=287.78 Aligned_cols=275 Identities=18% Similarity=0.246 Sum_probs=193.1
Q ss_pred CCccceeecCCCeEEEEEEec-CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|.+.+.||+|+||.||+|... +++.|++|.+...... ......+|+..+.+++ ||||+++++++.+ ....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 567889999999999999954 5789999998643321 2234567999999999 9999999999855 346799
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||+ +|+|.+++...... .+++.++..++.|++.||.||| +++++|+||+|+||+++.++.++|+|||
T Consensus 76 v~e~~-~~~l~~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~ 144 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKGK-------PFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFG 144 (283)
T ss_pred EEecC-CCCHHHHHHhcccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecc
Confidence 99999 88999988765411 3568899999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccC-CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcch
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRA 382 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 382 (473)
++....... ......|+..|+|||++.+ ..++.++|+||||+++|+|++|..||......+. +........+...
T Consensus 145 ~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 220 (283)
T cd07830 145 LAREIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKICSVLGTPTK 220 (283)
T ss_pred cceeccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHHHhcCCCCh
Confidence 998654322 1223457889999998754 4578999999999999999999999976432211 1111111000000
Q ss_pred hhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 383 EEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+.. .......... ...............+..+.+++.+||+.||++|||+.|++.
T Consensus 221 ~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 221 QDWPEGY-----KLASKLGFRF-PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhhhHh-----hhhccccccc-cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000 0000000000 000000001111122567899999999999999999999875
No 372
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=272.62 Aligned_cols=282 Identities=20% Similarity=0.258 Sum_probs=204.4
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEee--ccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC---
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG--- 217 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 217 (473)
.+.|....+||+|.||.||+|+ ..+|+.||+|++- ....+......+|+++|..++|+|++.++..|.......
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3567778899999999999998 5568889998764 233344556789999999999999999999986654332
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++||.+|+. +|..+|.... ..|+..++.+++.++..||.|+| +..|+|||+||+|+||+.+|.+
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~--------vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK--------VRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGIL 163 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc--------ccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceE
Confidence 2347999999955 8988887653 25778999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCcccc--ccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc--cHHH
Q 012014 298 HVGDFGMARFLPAIDK--QNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM--NLRN 372 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~--~~~~ 372 (473)
||+|||+++.+..... ....+...-|..|.+||.+.|. .|+++.|||..|||+.||+||.+-+.+...... .+..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 9999999987654332 2233444569999999998875 599999999999999999999999887543321 1111
Q ss_pred HHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHH------HHHHHHhhhcccCCCCCCCChHHHH
Q 012014 373 FVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECF------NSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
......++-+..+..-.+...++ ..+. +........+.. +..++|+..++..||.+|+++++++
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie--------~ePl--~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIE--------LEPL--PKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred HhccCCcccCCCcccchHHHhcc--------CCCC--CcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 11222222222222221221110 0101 111111122222 2677899999999999999999987
Q ss_pred H
Q 012014 447 S 447 (473)
Q Consensus 447 ~ 447 (473)
.
T Consensus 314 n 314 (376)
T KOG0669|consen 314 N 314 (376)
T ss_pred c
Confidence 4
No 373
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.5e-36 Score=284.81 Aligned_cols=270 Identities=20% Similarity=0.245 Sum_probs=195.9
Q ss_pred CCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 147 FSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
|+..+.||+|+||.||+|+. .+++.+|+|.+.... ....+.+.+|+.+++.++|+||+++++++.+. ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 56678899999999999994 458999999997543 33346778999999999999999999997543 47899
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
||||++ ++|.+++..... .+++..+..++.|++.||.||| +++|+||||+|+||++++++.+||+|||
T Consensus 76 v~e~~~-~~l~~~i~~~~~--------~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g 143 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRPG--------PLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFG 143 (282)
T ss_pred EecCcC-cCHHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCC
Confidence 999997 599999976531 3668899999999999999999 8999999999999999999999999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC---
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP--- 379 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~--- 379 (473)
++........ ......++..|+|||.+.+. .++.++||||||+++|||++|..||.+....+ .+.........
T Consensus 144 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 220 (282)
T cd07829 144 LARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTE 220 (282)
T ss_pred cccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcH
Confidence 9986643221 12223457789999998776 78999999999999999999999997633211 11111111100
Q ss_pred cchhhhcccc-chHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDF-NLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.......+.. ....++ ..............+..+.+++.+||..||++||++.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 221 ESWPGVTKLPDYKPTFP-----------KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHhhccccccccccc-----------ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000 000000 00000000111123668999999999999999999999875
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.7e-36 Score=281.16 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=189.3
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccC-----CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR-----PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
+|.+.+.||+|+||.||++.. ..+..+++|+++... ......+..|+.+++.++||||+++++++.+. .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER-----D 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----C
Confidence 478889999999999999984 335556667665322 12233567899999999999999999987543 3
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+++++|.+++...... ...+++.+++.++.|++.||.||| +++++|+||||+||+++. +.+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l 146 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT-----GKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKI 146 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc-----ccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEee
Confidence 579999999999999988643211 114668899999999999999999 999999999999999975 56999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
+|||++....... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .........
T Consensus 147 ~d~g~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~ 219 (260)
T cd08222 147 GDFGVSRLLMGSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVE 219 (260)
T ss_pred cccCceeecCCCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHc
Confidence 9999987654322 122234578899999999888889999999999999999999999864211 111110000
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.... ..+...+..+.+++.+||+.||++||++.|+++
T Consensus 220 ~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 GPTP-------------------------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCC-------------------------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0000 011234567889999999999999999999975
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=286.06 Aligned_cols=266 Identities=22% Similarity=0.306 Sum_probs=202.1
Q ss_pred hhhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-------CCCchhHHHHHHHHHhcCCCCceeeee
Q 012014 137 FKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-------PGGSKSFKSECKAAINIKHRNIVRVFT 208 (473)
Q Consensus 137 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~ 208 (473)
|.+--...++|-..++||+|||+.||+|. +...+-||||+-.... .+..+...+|.+|.+.|+||.||++|+
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 44444455678899999999999999998 5667889999875321 122345678999999999999999999
Q ss_pred eeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCc
Q 012014 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSN 288 (473)
Q Consensus 209 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 288 (473)
+|.-. ....|-|+|||+|.+|+-||+.+. .++++++..|+.||+.||.||... ..+|||-||||.|
T Consensus 535 yfslD----tdsFCTVLEYceGNDLDFYLKQhk---------lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgN 600 (775)
T KOG1151|consen 535 YFSLD----TDSFCTVLEYCEGNDLDFYLKQHK---------LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGN 600 (775)
T ss_pred eeeec----cccceeeeeecCCCchhHHHHhhh---------hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCcc
Confidence 98532 345699999999999999999876 467999999999999999999954 6899999999999
Q ss_pred EEec---CCccEEEeecccccccCccccc-----cceeeccCCCCcCCCccccCC----CCCcccchhhHhHHHHHHHhC
Q 012014 289 VLLD---DEMIGHVGDFGMARFLPAIDKQ-----NRFICIKGSTGYIPPEYDLGC----EASTYGDVYSFGILLLEMFTG 356 (473)
Q Consensus 289 il~~---~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~il~elltg 356 (473)
||+- ..|.+||.|||+++.+...... .......||.+|++||.+.-+ ..+.|+||||+|||+|..+.|
T Consensus 601 ILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYG 680 (775)
T KOG1151|consen 601 ILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYG 680 (775)
T ss_pred EEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhcc
Confidence 9994 4578999999999988665432 123456799999999987643 378999999999999999999
Q ss_pred CCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCC
Q 012014 357 IRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERP 436 (473)
Q Consensus 357 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 436 (473)
+.||...-.... +.+.........+..-.. +....+...+|.+||.+.-
T Consensus 681 rKPFGhnqsQQd-ILqeNTIlkAtEVqFP~K------------------------------PvVsseAkaFIRRCLaYRK 729 (775)
T KOG1151|consen 681 RKPFGHNQSQQD-ILQENTILKATEVQFPPK------------------------------PVVSSEAKAFIRRCLAYRK 729 (775)
T ss_pred CCCCCCchhHHH-HHhhhchhcceeccCCCC------------------------------CccCHHHHHHHHHHHHhhh
Confidence 999976432221 111111111111111111 1133456689999999999
Q ss_pred CCCCChHHHHH
Q 012014 437 RERMKINDVES 447 (473)
Q Consensus 437 ~~RPt~~ev~~ 447 (473)
++|....+++.
T Consensus 730 eDR~DV~qLA~ 740 (775)
T KOG1151|consen 730 EDRIDVQQLAC 740 (775)
T ss_pred hhhhhHHHHcc
Confidence 99999888764
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=290.09 Aligned_cols=195 Identities=27% Similarity=0.436 Sum_probs=165.5
Q ss_pred cceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEE
Q 012014 150 ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
.++||+|.||+||-|+ .++|+.||||++.+.+ ......+++|+.||+++.||.||.+--.|.. ....++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-----~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-----PERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-----CceEEEEeh
Confidence 4789999999999998 6789999999997543 3445679999999999999999999888754 347899999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC---ccEEEeecc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE---MIGHVGDFG 303 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~---~~~kl~Dfg 303 (473)
-+ +|+..+.|-..... .+++....-++.||+.||.||| .++|+|+||||+|||+.+. -.+||||||
T Consensus 644 Kl-~GDMLEMILSsEkg-------RL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 644 KL-HGDMLEMILSSEKG-------RLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred hh-cchHHHHHHHhhcc-------cchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeecccc
Confidence 99 56766666544332 4667777788999999999999 9999999999999999543 479999999
Q ss_pred cccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCC
Q 012014 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
+|+.++... ...+..|||.|.|||++....|...-|+||.|||+|--++|..||...
T Consensus 713 fARiIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 713 FARIIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred ceeecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 999986533 344677999999999999999999999999999999999999999753
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=246.50 Aligned_cols=269 Identities=19% Similarity=0.260 Sum_probs=195.2
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|...++||+|.||+||+|+ +.+++.||+|.++... ........+|+-+++.++|.|||+++++. .......
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 46677899999999999999 5678999999997533 33456789999999999999999999985 3345788
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+|+||| ..+|..|.....+ .+..+.+..++.|+++||.|+| ++++.|||+||.|+||+.+|.+||+||
T Consensus 78 lvfe~c-dqdlkkyfdslng--------~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladf 145 (292)
T KOG0662|consen 78 LVFEFC-DQDLKKYFDSLNG--------DLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADF 145 (292)
T ss_pred EeHHHh-hHHHHHHHHhcCC--------cCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEeccc
Confidence 999999 5689988876543 3557788899999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcC-
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKMNLRNFVKMALP- 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~- 379 (473)
|+++.++-... -.....-|..|.+|.++.+.. |++..|+||.|||+.|+.. |++.|.+..-. ..+..+.+..-.
T Consensus 146 glarafgipvr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd-dqlkrif~~lg~p 222 (292)
T KOG0662|consen 146 GLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQLKRIFRLLGTP 222 (292)
T ss_pred chhhhcCCceE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH-HHHHHHHHHhCCC
Confidence 99997754321 122234589999999988865 8999999999999999998 66666654322 223333322211
Q ss_pred --cchh---hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 380 --QRAE---EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 380 --~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.++. .+.|......+.. .-...+..+.....=.+|+...+.-+|..|.++++.++
T Consensus 223 ~ed~wps~t~lpdyk~yp~ypa-------------ttswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 223 TEDQWPSMTKLPDYKPYPIYPA-------------TTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccccCCccccCCCCcccCCccc-------------cchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1111 1111111111000 01112233334444456777777789999999987653
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=277.05 Aligned_cols=257 Identities=22% Similarity=0.199 Sum_probs=189.4
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCC-CCchhHHHHHHH-HHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-GGSKSFKSECKA-AINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.+....||.|+||+|++-. ...|+..|||+++.... ....++..|.+. ++.-+.||||++||.+.. ....|
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdcW 139 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDCW 139 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCcee
Confidence 34456679999999999987 56799999999985443 445678888876 444579999999999754 23579
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+.||+| ..||+.+.+.-.... ...+++.-.-.|..-.+.||.||-. ...|||||+||+|||++..|.+|||||
T Consensus 140 iCMELM-d~SlDklYk~vy~vq----~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDF 212 (361)
T KOG1006|consen 140 ICMELM-DISLDKLYKRVYSVQ----KSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDF 212 (361)
T ss_pred eeHHHH-hhhHHHHHHHHHHHH----hccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecc
Confidence 999999 568876654321110 1134566666788888999999985 678999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccC--CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLG--CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|++..+.. +...+.-.|-..|||||.+.. ..|+.+|||||||++|||+.||..||.+..+- -..+.....+
T Consensus 213 GIcGqLv~---SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv----feql~~Vv~g 285 (361)
T KOG1006|consen 213 GICGQLVD---SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV----FEQLCQVVIG 285 (361)
T ss_pred cchHhHHH---HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH----HHHHHHHHcC
Confidence 99976543 222334458889999998764 35899999999999999999999999764321 1111222222
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+..+ ....+....+..++..||.+|-++||...++.+
T Consensus 286 dpp~l~~~--------------------------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 286 DPPILLFD--------------------------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCCeecCc--------------------------ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 22222111 112346778999999999999999999998765
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=296.43 Aligned_cols=265 Identities=19% Similarity=0.286 Sum_probs=213.7
Q ss_pred chhhhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecc
Q 012014 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGV 213 (473)
Q Consensus 136 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 213 (473)
.++.+-..++.|++..+||.|.+|.||+++ .++++..|+|+..... ...+++..|.++++.. .|||++.+||+|.-.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 455566778899999999999999999999 6789999999986433 3456778888888877 699999999999877
Q ss_pred ccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 214 DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
+......+|||||||.+||.-|++++..+. .+.|..+..|++.++.||.+|| .+.++|||||-.|||++.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~-------rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~ 158 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGN-------RLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTE 158 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhccc-------chhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEec
Confidence 766777899999999999999999876632 4668889999999999999999 999999999999999999
Q ss_pred CccEEEeecccccccCccccccceeeccCCCCcCCCccccCC-----CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-----EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM 368 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~ 368 (473)
++.+||+|||.+..+... .....+..|||.|||||++... .|+..+|+||||++..||.-|.+|+..+.....
T Consensus 159 e~~VKLvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra 236 (953)
T KOG0587|consen 159 NAEVKLVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA 236 (953)
T ss_pred cCcEEEeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh
Confidence 999999999999876542 2334456799999999997643 377889999999999999999999976543221
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
-..+|......+.. +..-.+++-+++..||.+|-..||++.++++
T Consensus 237 ------LF~IpRNPPPkLkr----------------------------p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ------LFLIPRNPPPKLKR----------------------------PKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------hccCCCCCCccccc----------------------------hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11122222111111 1234668889999999999999999988864
No 380
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.4e-36 Score=312.18 Aligned_cols=146 Identities=27% Similarity=0.350 Sum_probs=126.2
Q ss_pred cCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCce
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 219 (473)
.++|.+.++||+|+||.||+|.. .+++.||+|+++..... ....+.+|+.++..++||||+++++++.. ..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----AN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CC
Confidence 36799999999999999999994 46899999998743322 23568889999999999999999988754 34
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl 299 (473)
..++||||+.+++|.+++.... .+++..++.++.||+.||.||| .++|+||||||+|||++.++.+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~---------~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL 145 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG---------YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKL 145 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEE
Confidence 6899999999999999997543 2457788999999999999999 899999999999999999999999
Q ss_pred eeccccc
Q 012014 300 GDFGMAR 306 (473)
Q Consensus 300 ~Dfg~~~ 306 (473)
+|||+++
T Consensus 146 ~DFGls~ 152 (669)
T cd05610 146 TDFGLSK 152 (669)
T ss_pred EeCCCCc
Confidence 9999986
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-37 Score=277.11 Aligned_cols=281 Identities=21% Similarity=0.235 Sum_probs=201.5
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCC--C----Cceeeeeeeecccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKH--R----NIVRVFTAFSGVDY 215 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~~~~~~~~~~~ 215 (473)
.+++|.+...+|+|.||.|-.+. ...+..||||+++... ...+...-|++++.++.+ | -+|++.++|.-
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy--- 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY--- 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc---
Confidence 47899999999999999999998 3457899999997433 234566779999999942 2 37777777632
Q ss_pred CCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC--
Q 012014 216 QGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-- 293 (473)
Q Consensus 216 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-- 293 (473)
..+.|||+|.+ |-|+.++|..+.-. +|+...+..++.|++++++||| +.+++|-||||+|||+.+
T Consensus 163 --rghiCivfell-G~S~~dFlk~N~y~-------~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 163 --RGHICIVFELL-GLSTFDFLKENNYI-------PFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSE 229 (415)
T ss_pred --cCceEEEEecc-ChhHHHHhccCCcc-------ccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccc
Confidence 34789999998 77999999887543 5779999999999999999999 999999999999999832
Q ss_pred ------------------CccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh
Q 012014 294 ------------------EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355 (473)
Q Consensus 294 ------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 355 (473)
+..++++|||.|+..... ......|..|.|||++.+-.++..+||||+||||+|+.|
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 346899999999864322 244557999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHhhcCcchhhhcccc-chHHHHhhhhhhcccccCCC--Ccch--------hhHHHHHHHHH
Q 012014 356 GIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDF-NLQEIEEGRTMCMEVSSSSG--SSAH--------ASIILECFNSI 424 (473)
Q Consensus 356 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~l 424 (473)
|...|.+..+.+ .+. +.+....+....++... ....+..++..+.+...... .... .........+|
T Consensus 305 G~~LFqtHen~E-HLa-MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 305 GETLFQTHENLE-HLA-MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred cceecccCCcHH-HHH-HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 999998755322 121 11111111112222211 22222222111222211110 0000 01112356679
Q ss_pred HHHhhhcccCCCCCCCChHHHHH
Q 012014 425 CEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 425 ~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.+|+.+||..||.+|+|+.|++.
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHccCccccccHHHHhc
Confidence 99999999999999999999874
No 382
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.7e-35 Score=274.03 Aligned_cols=236 Identities=26% Similarity=0.303 Sum_probs=187.4
Q ss_pred eecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEec
Q 012014 153 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 153 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
||.|+||.||++.. .+++.+|+|.+...... ....+.+|+.+++.++||||+++++.+.. ....+++|||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-----EEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-----CCeeEEEEecC
Confidence 69999999999984 45899999998753322 34578899999999999999999988743 44789999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 143 (250)
T cd05123 76 PGGELFSHLSKEG---------RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKEL 143 (250)
T ss_pred CCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceec
Confidence 9999999997654 2558889999999999999999 899999999999999999999999999999765
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... .......|+..|+|||...+...+.++|+||||+++|+|++|..||..... ...........
T Consensus 144 ~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~------- 209 (250)
T cd05123 144 SSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDP------- 209 (250)
T ss_pred ccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCC-------
Confidence 4321 122334578899999999888889999999999999999999999965322 11111100000
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIND 444 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 444 (473)
...+...+..+.+++.+||..||++|||+.+
T Consensus 210 -------------------------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 -------------------------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 0001112567789999999999999999954
No 383
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=290.89 Aligned_cols=242 Identities=23% Similarity=0.312 Sum_probs=196.0
Q ss_pred CCCCccceeecCCCeEEEEEEecC-CCEEEEEEeecc---CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLI---RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
.+++.+..||-||||.|=++.... ...+|+|++++. .....+....|-.+|...+.|.||++|..|.+ ..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-----~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-----SKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-----chh
Confidence 456677789999999999988433 334888888743 33455678899999999999999999999744 558
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.|++||-|-||.|...|+.++ .|....+.-++..+++|++||| ++|||+|||||+|.+++.+|.+||.
T Consensus 495 vYmLmEaClGGElWTiLrdRg---------~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLV 562 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRG---------SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLV 562 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcC---------CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEe
Confidence 899999999999999999887 3556777789999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCc
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQ 380 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 380 (473)
|||+|+.+.. ...+.+++|||.|.|||++.+...+.++|.||||+++|||++|.+||.+...... +..+++..
T Consensus 563 DFGFAKki~~---g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt-Yn~ILkGi--- 635 (732)
T KOG0614|consen 563 DFGFAKKIGS---GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT-YNLILKGI--- 635 (732)
T ss_pred ehhhHHHhcc---CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHHhhh---
Confidence 9999998865 4456678999999999999999999999999999999999999999987543321 11111100
Q ss_pred chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 012014 381 RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMK 441 (473)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 441 (473)
+ ....+...+....+|+.+.+..+|.+|..
T Consensus 636 ------d-------------------------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 636 ------D-------------------------KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ------h-------------------------hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 0 00112234455667899999999999986
No 384
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=267.20 Aligned_cols=201 Identities=22% Similarity=0.267 Sum_probs=174.8
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc---CCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCC
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI---RPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 217 (473)
..++|.+..+||+|+|+.|..++ ..+.+.+|+|++++. ...+.+..+.|-.+..+. +||.+|-++.+|. +
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq-----t 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-----T 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc-----c
Confidence 34789999999999999999998 567899999999853 334556677888887766 7999999999874 4
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
...+++|.||++||+|--+++... .++++.+.-+..+|+.||.||| ++|||.||||.+|+|+|..|++
T Consensus 323 esrlffvieyv~ggdlmfhmqrqr---------klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghi 390 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQR---------KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHI 390 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhh---------cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCce
Confidence 557899999999999988887765 4668889999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
||.|+|+++.-- .......+++|||.|.|||++.+..|...+|+|+|||+++||+.|+.||+-
T Consensus 391 kltdygmcke~l--~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 391 KLTDYGMCKEGL--GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred eecccchhhcCC--CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 999999998532 234455678899999999999999999999999999999999999999974
No 385
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.1e-35 Score=272.89 Aligned_cols=220 Identities=19% Similarity=0.107 Sum_probs=173.0
Q ss_pred CCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCCCCHH
Q 012014 156 GNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLE 234 (473)
Q Consensus 156 G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 234 (473)
|.||.||++. ..+++.+|+|.+.... .+.+|...+....||||+++++++.+ ....+++|||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-----EDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-----CCeEEEEEecCCCCCHH
Confidence 8999999999 5678999999986432 23455556666689999999998754 34679999999999999
Q ss_pred HHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccc
Q 012014 235 EWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314 (473)
Q Consensus 235 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 314 (473)
+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~~---------~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--- 138 (237)
T cd05576 74 SHISKFL---------NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--- 138 (237)
T ss_pred HHHHHhc---------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---
Confidence 9987643 2568889999999999999999 999999999999999999999999999988655331
Q ss_pred cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHH
Q 012014 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEI 394 (473)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (473)
.....++..|+|||...+..++.++||||+|+++|||++|..|+....... .....
T Consensus 139 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------~~~~~------- 194 (237)
T cd05576 139 --CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------NTHTT------- 194 (237)
T ss_pred --cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------ccccc-------
Confidence 122345778999999988889999999999999999999998875321100 00000
Q ss_pred HhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 395 EEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
...+...+..+.+++.+||+.||++|||+.
T Consensus 195 -------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 195 -------------------LNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -------------------cCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 000112345778999999999999999973
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.4e-35 Score=298.71 Aligned_cols=211 Identities=19% Similarity=0.182 Sum_probs=145.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-cC----CCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-C
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-FD----GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-Q 216 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 216 (473)
..++|.+.++||+|+||.||+|.. .+ +..||+|+++... ..+...++ .+....+.+++.++..+..... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999994 44 6899999875322 11222222 1222233344433333222111 3
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCC-----------CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTN-----------WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLK 285 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----------~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlk 285 (473)
.....++||||+++++|.+++....... ..+.........+..++.||+.||.||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 3456899999999999999987543110 0000011223446679999999999999 8999999999
Q ss_pred CCcEEecC-CccEEEeecccccccCccccccceeeccCCCCcCCCccccCC----------------------CCCcccc
Q 012014 286 PSNVLLDD-EMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC----------------------EASTYGD 342 (473)
Q Consensus 286 p~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 342 (473)
|+|||++. ++.+||+|||+++.+.... ........||+.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 5899999999998654322 1222345689999999965322 2345679
Q ss_pred hhhHhHHHHHHHhCCCCCC
Q 012014 343 VYSFGILLLEMFTGIRPSD 361 (473)
Q Consensus 343 iwSlG~il~elltg~~P~~ 361 (473)
||||||++|||+++..|++
T Consensus 362 VwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred cHHHHHHHHHHHhCcCCCc
Confidence 9999999999999776654
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2e-36 Score=255.66 Aligned_cols=275 Identities=17% Similarity=0.200 Sum_probs=201.0
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCce
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 219 (473)
...++|++.+++|+|.|++||.|. ..++++++||+++.. ..+.+.+|+.||..|. ||||++++++..++. +.
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Sk 108 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SK 108 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---cc
Confidence 456789999999999999999998 567899999999743 3567899999999996 999999999987654 45
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-ccEE
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-MIGH 298 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-~~~k 298 (473)
.+.|++||+.+.+...+... ++...+..++.+++.||.|+| +.||+|||+||.|++||.. -.++
T Consensus 109 tpaLiFE~v~n~Dfk~ly~t------------l~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLr 173 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYPT------------LTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLR 173 (338)
T ss_pred CchhHhhhhccccHHHHhhh------------hchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceee
Confidence 67899999999888776543 446678889999999999999 9999999999999999865 4789
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|+|+|+|.++...... .....+..|--||.+...+ |+.+-|+|||||++..|+..+.||-...+....+..+.+..
T Consensus 174 lIDWGLAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVL 250 (338)
T KOG0668|consen 174 LIDWGLAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVL 250 (338)
T ss_pred eeecchHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHh
Confidence 9999999987654322 2334577889999988754 78888999999999999999999865444433333333332
Q ss_pred cCcchhhhc-------cccchHHHHhhhhhhcccccCCCCcchhhH-HHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVV-------DDFNLQEIEEGRTMCMEVSSSSGSSAHASI-ILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
....+...+ ++.....+.. .+...+....... ..-..++..+|+...|.+|-.+|||++|...
T Consensus 251 Gt~el~~Yl~KY~i~Ldp~~~~i~~~-------~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 251 GTDELYAYLNKYQIDLDPQFEDILGR-------HSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ChHHHHHHHHHHccCCChhHhhHhhc-------cccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 222221111 1111111000 0011111111111 1112467789999999999999999999754
No 388
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=269.89 Aligned_cols=276 Identities=20% Similarity=0.234 Sum_probs=214.4
Q ss_pred hhhhhcccCCCCccceeecCCCeEEEEEEecC------CCEEEEEEeeccC-CCCchhHHHHHHHHHhcCCCCceeeeee
Q 012014 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHRNIVRVFTA 209 (473)
Q Consensus 137 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~ 209 (473)
.+++.....+++...++-+|.||.||+|.|.+ .+.|-+|.++... .-....+..|...+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34455556778888899999999999997654 3446677665322 2234568889999999999999999999
Q ss_pred eeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcE
Q 012014 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNV 289 (473)
Q Consensus 210 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 289 (473)
+.+ ....+++++.++.-|+|..||...+.. .......++..+...++.|++.|++||| ++++||.||...|.
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~-~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNC 427 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGD-DPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNC 427 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccC-CCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcc
Confidence 854 345678999999999999999844422 1222334667788899999999999999 99999999999999
Q ss_pred EecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh-CCCCCCCCCCCcc
Q 012014 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGIFTGKM 368 (473)
Q Consensus 290 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~~~~~~ 368 (473)
+||+...+||+|-.+++.+-+.+..-..........||+||.+.+..|+.++|||||||++|||+| |+.||......++
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm 507 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM 507 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence 999999999999999987766553333233334678999999999999999999999999999999 9999876433221
Q ss_pred cHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 369 NLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
. ..+.+|++. ..+.+||.+|..+|..||..+|++||+++|++.-
T Consensus 508 --------------~--------~ylkdGyRl--------------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 508 --------------E--------HYLKDGYRL--------------AQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred --------------H--------HHHhcccee--------------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 1 111112211 2345799999999999999999999999999999
Q ss_pred HHHHHHhh
Q 012014 449 LRLIRRKL 456 (473)
Q Consensus 449 L~~l~~~~ 456 (473)
|......+
T Consensus 552 LseF~~ql 559 (563)
T KOG1024|consen 552 LSEFHTQL 559 (563)
T ss_pred HHHHHHHH
Confidence 98876654
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.1e-34 Score=283.61 Aligned_cols=216 Identities=23% Similarity=0.238 Sum_probs=156.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEe-----------------cCCCEEEEEEeeccCCCCc--------------hhHHHH
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTL-----------------FDGTTIAVKVFNLIRPGGS--------------KSFKSE 191 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~--------------~~~~~E 191 (473)
..++|++.++||+|+||.||+|.. ..++.||||+++....... +....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 577999999999999999999963 2356799999874332222 233456
Q ss_pred HHHHHhcCCCCc-----eeeeeeeecccc---CCceeeEEEEEecCCCCHHHHhcCCCCCC---------------CCCc
Q 012014 192 CKAAINIKHRNI-----VRVFTAFSGVDY---QGARFKAVVYKFMPNGSLEEWLRGKDDTN---------------WRPL 248 (473)
Q Consensus 192 ~~~l~~l~h~ni-----v~~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------~~~~ 248 (473)
+..+.+++|.++ ++++++|..... ......+|||||+++++|.++++...... ....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777654211 11345799999999999999997542110 0001
Q ss_pred chhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCC
Q 012014 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIP 328 (473)
Q Consensus 249 ~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 328 (473)
...+.+..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++........ .......+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 112456778899999999999999 89999999999999999999999999999975533221 11122235889999
Q ss_pred CccccCCC--------------------C--CcccchhhHhHHHHHHHhCCC-CCCC
Q 012014 329 PEYDLGCE--------------------A--STYGDVYSFGILLLEMFTGIR-PSDG 362 (473)
Q Consensus 329 PE~~~~~~--------------------~--~~~~DiwSlG~il~elltg~~-P~~~ 362 (473)
||.+.... + ..+.||||+||++|+|++|.. ||.+
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 99875422 1 234799999999999999875 7754
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-35 Score=279.91 Aligned_cols=213 Identities=22% Similarity=0.288 Sum_probs=176.2
Q ss_pred hhhcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC---CCCchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 139 DLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 139 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
.-+....-|..++.||-|+||+|.+++ ..+...+|+|.+.+.. .+.......|-.||...+.+-||+||..|.+.
T Consensus 623 RaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk- 701 (1034)
T KOG0608|consen 623 RAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK- 701 (1034)
T ss_pred HhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC-
Confidence 334445668889999999999999998 4556789999987433 23345677899999999999999999988554
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
..+|+||+|++||++-.+|...+ .|.+..+..++.++..|+++.| ..|+|||||||+|||||.+
T Consensus 702 ----dnLYFVMdYIPGGDmMSLLIrmg---------IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrd 765 (1034)
T KOG0608|consen 702 ----DNLYFVMDYIPGGDMMSLLIRMG---------IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRD 765 (1034)
T ss_pred ----CceEEEEeccCCccHHHHHHHhc---------cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccC
Confidence 47899999999999999998765 4668888889999999999999 9999999999999999999
Q ss_pred ccEEEeecccccccCc---------ccccc-------------------------------ceeeccCCCCcCCCccccC
Q 012014 295 MIGHVGDFGMARFLPA---------IDKQN-------------------------------RFICIKGSTGYIPPEYDLG 334 (473)
Q Consensus 295 ~~~kl~Dfg~~~~~~~---------~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~ 334 (473)
|++||.|||+++-+.- .+... .....+||+.|+|||++..
T Consensus 766 GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r 845 (1034)
T KOG0608|consen 766 GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR 845 (1034)
T ss_pred CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc
Confidence 9999999999864321 00000 0113469999999999999
Q ss_pred CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc
Q 012014 335 CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM 368 (473)
Q Consensus 335 ~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~ 368 (473)
..|+..+|+||.|||||||+.|+.||......+.
T Consensus 846 ~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 846 TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred cCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 9999999999999999999999999987655543
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=245.32 Aligned_cols=223 Identities=22% Similarity=0.258 Sum_probs=172.0
Q ss_pred hcccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC-CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCC
Q 012014 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 141 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 217 (473)
....++...+..||+|+||.|-+-+ ..+|+..|+|.+...- ....+++.+|+.+..+. .+|.+|++||.+..
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r----- 116 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR----- 116 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----
Confidence 3445566667889999999998877 5789999999997432 33445677888875554 79999999998643
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....++.||.| ..||+.+...--..+ ..+++.-.-+|+..++.||.|||+ ...+||||+||+|||++.+|.+
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g-----~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqV 188 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKG-----GTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQV 188 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcC-----CcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcE
Confidence 34689999999 568887764422111 135577788999999999999996 5789999999999999999999
Q ss_pred EEeecccccccCccccccceeeccCCCCcCCCccccC----CCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG----CEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
|+||||++..+.+.- ..+...|-..|||||.+.. ..|+.+|||||||+++.||.++++||+.-...-..+.+.
T Consensus 189 KiCDFGIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 189 KICDFGISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred EEcccccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 999999998764422 2222457888999998653 369999999999999999999999998765555555555
Q ss_pred HHhhcC
Q 012014 374 VKMALP 379 (473)
Q Consensus 374 ~~~~~~ 379 (473)
++...|
T Consensus 266 Veep~P 271 (282)
T KOG0984|consen 266 VEEPSP 271 (282)
T ss_pred hcCCCC
Confidence 554444
No 392
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.9e-33 Score=258.58 Aligned_cols=238 Identities=25% Similarity=0.330 Sum_probs=188.3
Q ss_pred CCeEEEEEEec-CCCEEEEEEeeccCCCC-chhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCCCCHH
Q 012014 157 NFGSVYNGTLF-DGTTIAVKVFNLIRPGG-SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLE 234 (473)
Q Consensus 157 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 234 (473)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+||+++++.+... ...++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHH
Confidence 58999999954 58999999997654444 67899999999999999999999997543 3679999999999999
Q ss_pred HHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccc
Q 012014 235 EWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314 (473)
Q Consensus 235 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 314 (473)
+++..... ++...+..++.+++.++.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 76 ~~~~~~~~---------~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-- 141 (244)
T smart00220 76 DLLKKRGR---------LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-- 141 (244)
T ss_pred HHHHhccC---------CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--
Confidence 99876531 457889999999999999999 8999999999999999999999999999998765432
Q ss_pred cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHH
Q 012014 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEI 394 (473)
Q Consensus 315 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (473)
......|+..|++||...+..++.++||||||+++++|++|..||....... ..............
T Consensus 142 -~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~----~~~~~~~~~~~~~~--------- 207 (244)
T smart00220 142 -LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL----ELFKKIGKPKPPFP--------- 207 (244)
T ss_pred -ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHhccCCCCc---------
Confidence 2233457889999999988889999999999999999999999997531111 11111000000000
Q ss_pred HhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 395 EEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
......+..+.+++.+||..||++||++.++++
T Consensus 208 --------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 208 --------------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred --------------------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000004567889999999999999999999986
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=287.33 Aligned_cols=246 Identities=21% Similarity=0.314 Sum_probs=185.4
Q ss_pred CCccceeecCCCeE-EEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceeeEEE
Q 012014 147 FSSANLIGAGNFGS-VYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 147 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
|...+++|.|+.|+ ||+|. .+|+.||||++-. .......+|+..|+.- +|||||++|+.- .+..+.||.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~-ye~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIa 581 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV-YEGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIA 581 (903)
T ss_pred eccHHHcccCCCCcEEEEEe-eCCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEE
Confidence 45567789998886 68897 5789999998752 2344568999999887 699999998763 446689999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC---C--ccEEE
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD---E--MIGHV 299 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~---~--~~~kl 299 (473)
.|.| ..+|.+++......... ..--..+.++.|+++||++|| +.+||||||||.||||+. + ..++|
T Consensus 582 lELC-~~sL~dlie~~~~d~~~-----~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~i 652 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEM-----QSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKI 652 (903)
T ss_pred ehHh-hhhHHHHHhccccchhh-----cccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEe
Confidence 9999 66999999885111000 001234678899999999999 899999999999999965 2 57899
Q ss_pred eecccccccCccccc-cceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhC-CCCCCCCCCCcccHHHHHHhh
Q 012014 300 GDFGMARFLPAIDKQ-NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG-IRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~P~~~~~~~~~~~~~~~~~~ 377 (473)
+|||+++.+...... .......||-+|+|||++....-+.++||||+||++|+.++| .+||......+.++..-....
T Consensus 653 SDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L 732 (903)
T KOG1027|consen 653 SDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL 732 (903)
T ss_pred cccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce
Confidence 999999988664422 234456799999999999998888899999999999999995 999987544433222110000
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
..+ . ...++ +..+||.+|+++||..||++.+|+
T Consensus 733 -----~~L-~----------------------------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 733 -----VHL-E----------------------------PLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -----eee-c----------------------------cCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 000 0 00112 667899999999999999999997
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-32 Score=253.02 Aligned_cols=136 Identities=21% Similarity=0.327 Sum_probs=114.9
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC-----C---CCceeeeeeeeccc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK-----H---RNIVRVFTAFSGVD 214 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~ 214 (473)
..+|.+.++||-|-|++||+|. ..+.+.||+|+.+... ...+....||++|++++ | .+||++++.|....
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3689999999999999999998 5667899999987432 23456788999999983 3 46999999998765
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~ 291 (473)
.++.++|+|+|++ |.+|..+|....-. .++...+.+|++||+.||.|||. ..||||-||||+|||+
T Consensus 156 -pNG~HVCMVfEvL-GdnLLklI~~s~Yr-------Glpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 -PNGQHVCMVFEVL-GDNLLKLIKYSNYR-------GLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLL 221 (590)
T ss_pred -CCCcEEEEEehhh-hhHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeee
Confidence 5677899999999 88999999776533 46688999999999999999997 4599999999999998
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-33 Score=262.54 Aligned_cols=199 Identities=21% Similarity=0.292 Sum_probs=168.8
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--------CCCchhHHHHHHHHHhcC---CCCceeeeeee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--------PGGSKSFKSECKAAINIK---HRNIVRVFTAF 210 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~ 210 (473)
...+|...+.||+|+||.|+.|. ..+...|+||.+.+.+ .......-.|++||..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 34568999999999999999999 4567789999886433 122234567999999997 99999999998
Q ss_pred eccccCCceeeEEEEEec-CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcE
Q 012014 211 SGVDYQGARFKAVVYKFM-PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNV 289 (473)
Q Consensus 211 ~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 289 (473)
.+.+ ++||+||-- ++-+|.++|..+. .+++.++..|+.|++.|+++|| +.||||||||-+|+
T Consensus 639 Eddd-----~yyl~te~hg~gIDLFd~IE~kp---------~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenv 701 (772)
T KOG1152|consen 639 EDDD-----YYYLETEVHGEGIDLFDFIEFKP---------RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENV 701 (772)
T ss_pred ecCC-----eeEEEecCCCCCcchhhhhhccC---------ccchHHHHHHHHHHHhcccccc---ccCceecccccccE
Confidence 6644 789999976 4679999998776 4668899999999999999999 99999999999999
Q ss_pred EecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCC-CcccchhhHhHHHHHHHhCCCCCCC
Q 012014 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 290 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
.++.+|.+||+|||.+.... ......++||..|.|||++.|..| +..-|||++|++||.++....||..
T Consensus 702 ivd~~g~~klidfgsaa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 702 IVDSNGFVKLIDFGSAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EEecCCeEEEeeccchhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99999999999999997653 334556789999999999999887 4556999999999999999999864
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-33 Score=270.64 Aligned_cols=254 Identities=19% Similarity=0.271 Sum_probs=202.2
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
...++|.....+|+|.||.||+++ ..+++..|+|+++.....+..-.++|+-+++..+|||||.+++.+.. ...
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-----~dk 86 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-----RDK 86 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-----hcC
Confidence 345789999999999999999999 67899999999998887788888999999999999999999998754 336
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
.|+.||||.+|+|.+..+..+ .+++.++...++..+.||+||| +.|-+|||||-.||++++.|.+|++
T Consensus 87 lwicMEycgggslQdiy~~Tg---------plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvkla 154 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYHVTG---------PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLA 154 (829)
T ss_pred cEEEEEecCCCcccceeeecc---------cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeec
Confidence 799999999999999877655 4678899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccccceeeccCCCCcCCCccc---cCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYD---LGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||.+..+... -.....+.||+.|||||+. ..+.|...+|||++|++..|+-.-++|-..... ++...-+-
T Consensus 155 Dfgvsaqitat--i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----mr~l~LmT 228 (829)
T KOG0576|consen 155 DFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----MRALFLMT 228 (829)
T ss_pred ccCchhhhhhh--hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----HHHHHHhh
Confidence 99998766432 3344567799999999975 356799999999999999999887777432211 11111111
Q ss_pred cC-cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LP-QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.. .+...+-|+ ..-.+.+-++++.|+..+|++|||+..++.
T Consensus 229 kS~~qpp~lkDk-----------------------------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 229 KSGFQPPTLKDK-----------------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccCCCCCcccCC-----------------------------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11 111111111 112446778999999999999999987653
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-34 Score=246.44 Aligned_cols=203 Identities=21% Similarity=0.298 Sum_probs=164.5
Q ss_pred CCCccceeecCCCeEEEEEE-ecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.+..+.||-|+||.||.+. -++|+.||+|++-.. +....+.+.+|++.|..++|.|++..+++..-...+--...|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 34456789999999999998 467999999988532 223456788999999999999999998876544333334568
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
+++|+| ..+|...|-... .++...+.-+++||++||.||| +.+|.||||||.|+|++.|..+||+||
T Consensus 134 V~TELm-QSDLHKIIVSPQ---------~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDF 200 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVSPQ---------ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDF 200 (449)
T ss_pred HHHHHH-HhhhhheeccCC---------CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEeccc
Confidence 899998 568988887655 3556777789999999999999 999999999999999999999999999
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCC-CCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
|+++...... ....+...-|..|.|||++.|.. |+.+.||||.|||+.||+.++..|..
T Consensus 201 GLARvee~d~-~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 201 GLARTWDQRD-RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ccccccchhh-hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 9998755433 22233334588999999998864 99999999999999999999888864
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=243.02 Aligned_cols=282 Identities=18% Similarity=0.192 Sum_probs=195.6
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccC--CCCchhHHHHHHHHHhcCCCCceeeeeeeecccc-CCc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIR--PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDY-QGA 218 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 218 (473)
...+|.-.+.+|.|+- .|..|. .-.+++||+|++.... ....++..+|...+..++|+||++++.+|.-... ...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4567888888999988 566555 4468999999886432 2344667899999999999999999999854321 223
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
...|+|||+| .++|.+.+... +.-.....|..|++.|+.||| +.||+||||||+||++..+..+|
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~e-----------lDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lK 158 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILME-----------LDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLK 158 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHHh-----------cchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhhee
Confidence 4579999999 67999988733 224677889999999999999 99999999999999999999999
Q ss_pred EeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 012014 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 299 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
|.|||+|+.-.. .-..+....|..|.|||++.+..+...+||||+||++.||++|..-|.| +..+.+|.+..-
T Consensus 159 i~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki~~ 231 (369)
T KOG0665|consen 159 ILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKIIE 231 (369)
T ss_pred eccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHHHH
Confidence 999999985432 2233445678999999999998899999999999999999999998875 333444433210
Q ss_pred C-cch----hhhccccchHHHHhh---h-hhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 379 P-QRA----EEVVDDFNLQEIEEG---R-TMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 379 ~-~~~----~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
. +.+ ..-+.+......... . ..-.++.+...-....+...-......+|+.+||..||++|.|+++++.
T Consensus 232 ~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 232 QLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0 000 000000000000000 0 0000000000000000111123556778999999999999999999864
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=3.4e-32 Score=254.81 Aligned_cols=283 Identities=22% Similarity=0.270 Sum_probs=201.2
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC------CCCceeeeeeeeccccC
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK------HRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 216 (473)
.++|.+....|+|-|++|.+|. ...|..||||++.... --.+.=+.|+++|++|+ --|+++++..|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h---- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH---- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh----
Confidence 4678888889999999999998 4457899999997432 12234568999999994 3478899888755
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-c
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-M 295 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-~ 295 (473)
.+++|||+|-+ .-+|.++|+..+.. ..+....+..++.|+.-||..|- ..||+|.||||+|||+++. .
T Consensus 506 -knHLClVFE~L-slNLRevLKKyG~n------vGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 506 -KNHLCLVFEPL-SLNLREVLKKYGRN------VGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred -cceeEEEehhh-hchHHHHHHHhCcc------cceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcc
Confidence 34899999988 56999999887643 35668888999999999999999 9999999999999999865 4
Q ss_pred cEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH-
Q 012014 296 IGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV- 374 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~- 374 (473)
.+||||||.|....... .+...-+..|.|||++.|.+|+...|+||.||+||||.||+..|.|..+.++ +.-+.
T Consensus 575 iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M-Lrl~me 649 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM-LRLFME 649 (752)
T ss_pred eeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH-HHHHHH
Confidence 68999999998664322 2223346679999999999999999999999999999999999998655443 11111
Q ss_pred -HhhcCcch-------hhhccccch---HHHHhh-----hhhhccc-------ccCCCCcchhhHHHHHHHHHHHHhhhc
Q 012014 375 -KMALPQRA-------EEVVDDFNL---QEIEEG-----RTMCMEV-------SSSSGSSAHASIILECFNSICEIGVAC 431 (473)
Q Consensus 375 -~~~~~~~~-------~~~~~~~~~---~~~~~~-----~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~c 431 (473)
+..+|... .+-+|..+. ...... ..+-... +........+.........|.+|+..|
T Consensus 650 ~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkm 729 (752)
T KOG0670|consen 650 LKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKM 729 (752)
T ss_pred hcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHH
Confidence 11111100 000000000 000000 0000000 001112223344556788999999999
Q ss_pred ccCCCCCCCChHHHHH
Q 012014 432 SAERPRERMKINDVES 447 (473)
Q Consensus 432 l~~dP~~RPt~~ev~~ 447 (473)
+..||++|.|..+.+.
T Consensus 730 l~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 730 LILDPEKRITVNQALK 745 (752)
T ss_pred hccChhhcCCHHHHhc
Confidence 9999999999988764
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=9.8e-30 Score=228.43 Aligned_cols=210 Identities=26% Similarity=0.455 Sum_probs=177.0
Q ss_pred eecCCCeEEEEEEec-CCCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCC
Q 012014 153 IGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN 230 (473)
Q Consensus 153 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 230 (473)
||+|++|.||++... +++.+++|++...... ....+.+|+..+..+.|++|+++++++... ...++++|++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 689999999999954 4899999998754322 246789999999999999999999997543 467999999999
Q ss_pred CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccEEEeecccccccC
Q 012014 231 GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVGDFGMARFLP 309 (473)
Q Consensus 231 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~kl~Dfg~~~~~~ 309 (473)
++|.+++..... .++...+..++.+++.+|.+|| +.+++|+||+|.||+++. ++.++|+|||.+....
T Consensus 76 ~~l~~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 76 GSLKDLLKENEG--------KLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred CcHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 999999976521 3558899999999999999999 899999999999999999 8999999999998664
Q ss_pred ccccccceeeccCCCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccc
Q 012014 310 AIDKQNRFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDD 388 (473)
Q Consensus 310 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (473)
.... ......+...|++||..... .++.++|+|++|+++++|
T Consensus 145 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------- 187 (215)
T cd00180 145 SDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------- 187 (215)
T ss_pred CCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------
Confidence 4321 12234478889999998887 788999999999999999
Q ss_pred cchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 389 FNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
..+.+++..|++.||++||++.++++.
T Consensus 188 ---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 145579999999999999999999864
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-31 Score=228.36 Aligned_cols=255 Identities=17% Similarity=0.237 Sum_probs=189.6
Q ss_pred cCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCceee
Q 012014 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGARFK 221 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 221 (473)
.+.|.+.+.||+|.||.+-+++ ..+++.+++|.+... ......|.+|...--.| .|.||+..|++. .++....
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 4678899999999999999999 456788999987532 33567888988765555 599999988775 3445578
Q ss_pred EEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec--CCccEEE
Q 012014 222 AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD--DEMIGHV 299 (473)
Q Consensus 222 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~--~~~~~kl 299 (473)
++++||++.|+|.+-+...+ +-+.....++.|+++|+.|+| ++++||||||.+||||- +...+||
T Consensus 98 vF~qE~aP~gdL~snv~~~G----------igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKl 164 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG----------IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKL 164 (378)
T ss_pred EEeeccCccchhhhhcCccc----------ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEe
Confidence 89999999999998877654 336777889999999999999 99999999999999993 4458999
Q ss_pred eecccccccCccccccceeeccCCCCcCCCccccCC-----CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC-----EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 300 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
+|||.++..+..- ....-+..|.+||..... ...+.+|||.||+++|.++||.+||......+..+..|.
T Consensus 165 cDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 165 CDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred eecccccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 9999997653321 112236679999975432 246788999999999999999999987666665555555
Q ss_pred HhhcCc--chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 375 KMALPQ--RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 375 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
...... ......+ ...+.+.++..+-+..+|++|--..++.+.-..+
T Consensus 240 ~w~~rk~~~~P~~F~-------------------------------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 240 QWLKRKNPALPKKFN-------------------------------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred HHhcccCccCchhhc-------------------------------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 433221 1111111 1345667788889999999995555555444433
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=3.6e-30 Score=236.73 Aligned_cols=282 Identities=20% Similarity=0.259 Sum_probs=198.5
Q ss_pred cCCCCccceeecCCCeEEEEEEec----CCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 218 (473)
.+.|...++||+|.|++||++... ..+.||+|.+...+ ...++.+|++.|..+ .+.||+++.+++.. .
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rn-----n 107 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRN-----N 107 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhcc-----C
Confidence 356888999999999999999832 46789999987543 456789999999999 59999999998743 4
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC-CccE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIG 297 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~-~~~~ 297 (473)
....+|+||++..+..+++... +..++..+++.++.||.++| .+|||||||||+|+|.+. .+.-
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~l------------~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg 172 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRSL------------SLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRG 172 (418)
T ss_pred CeeEEEecccCccCHHHHHhcC------------CHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCc
Confidence 4689999999999999988754 37788999999999999999 999999999999999974 3567
Q ss_pred EEeecccccccCccc------------------------------------------cccceeeccCCCCcCCCccccCC
Q 012014 298 HVGDFGMARFLPAID------------------------------------------KQNRFICIKGSTGYIPPEYDLGC 335 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 335 (473)
.|.|||+|....... .........||++|.|||++...
T Consensus 173 ~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~ 252 (418)
T KOG1167|consen 173 VLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC 252 (418)
T ss_pred eEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc
Confidence 899999997211000 00001134599999999998775
Q ss_pred C-CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhh---hccc---------cchHHHHhhhhhh-
Q 012014 336 E-ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEE---VVDD---------FNLQEIEEGRTMC- 401 (473)
Q Consensus 336 ~-~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~- 401 (473)
+ .++++||||.|||++.++++.+||-...+.-..+...+...-+..... ..+. .............
T Consensus 253 ~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~ 332 (418)
T KOG1167|consen 253 PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLH 332 (418)
T ss_pred cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccC
Confidence 5 788999999999999999999999776555555555443322211111 0010 0011111101011
Q ss_pred cccccCCCC-c-chhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 402 MEVSSSSGS-S-AHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 402 ~~~~~~~~~-~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
.+....... . .........+..+.+|+.+|+..||.+|.|++|.++
T Consensus 333 ~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 333 IESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000000000 0 111122234558899999999999999999999864
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2.9e-29 Score=228.16 Aligned_cols=199 Identities=29% Similarity=0.451 Sum_probs=168.2
Q ss_pred CCccceeecCCCeEEEEEEecC-CCEEEEEEeeccCCC-CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 147 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|+..+.+++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 5667889999999999999554 899999999765444 567889999999999999999999987543 367999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
+||+++++|.+++...... +++.....++.+++.++.+|| +++++|+||+|.||+++.++.++|+|||.
T Consensus 76 ~e~~~~~~L~~~~~~~~~~--------~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~ 144 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGK--------LSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGL 144 (225)
T ss_pred EeccCCCCHHHHHHhcccC--------CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCce
Confidence 9999999999999765421 447888999999999999999 88999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccc-cCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYD-LGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+........ .......++..|++||.. ....++.++|+||||+++++|++|+.||..
T Consensus 145 ~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 145 ARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 987654321 122334578889999998 666788899999999999999999999965
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=2.2e-28 Score=213.72 Aligned_cols=170 Identities=19% Similarity=0.207 Sum_probs=128.2
Q ss_pred CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCc
Q 012014 231 GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310 (473)
Q Consensus 231 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 310 (473)
|||.+++..... .+++.+++.++.|++.||.||| +++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~--------~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVRGR--------PLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecc
Confidence 789999976432 3679999999999999999999 666 999999999999999 999986543
Q ss_pred cccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccc
Q 012014 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFN 390 (473)
Q Consensus 311 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (473)
.. ..||+.|+|||++.+..++.++|||||||++|||++|..||.........+..+.....+..... .
T Consensus 62 ~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 129 (176)
T smart00750 62 EQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD---R-- 129 (176)
T ss_pred cc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc---c--
Confidence 21 25899999999999999999999999999999999999999754322222222211111100000 0
Q ss_pred hHHHHhhhhhhcccccCCCCcchhhHHHHHH--HHHHHHhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 391 LQEIEEGRTMCMEVSSSSGSSAHASIILECF--NSICEIGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
....... ..+.+++.+||+.||.+|||+.|+++.+..+...
T Consensus 130 ------------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 ------------------------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ------------------------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0011122 3689999999999999999999999998887543
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=6.7e-29 Score=265.32 Aligned_cols=201 Identities=17% Similarity=0.244 Sum_probs=138.1
Q ss_pred hcCC-CCceeeeeeeeccccCC--ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhh
Q 012014 197 NIKH-RNIVRVFTAFSGVDYQG--ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHC 273 (473)
Q Consensus 197 ~l~h-~niv~~~~~~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~ 273 (473)
.++| +||++++++|.....+. ....+.++||+ +++|.++|..... .+++.+++.++.||+.||.|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH- 97 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDR--------SVDAFECFHVFRQIVEIVNAAH- 97 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccc--------cccHHHHHHHHHHHHHHHHHHH-
Confidence 3455 58888888873332111 23457788887 6799999975321 3668899999999999999999
Q ss_pred CCCCCeeeccCCCCcEEecCC-------------------ccEEEeecccccccCcccc--------------ccceeec
Q 012014 274 DCQPPIAHCNLKPSNVLLDDE-------------------MIGHVGDFGMARFLPAIDK--------------QNRFICI 320 (473)
Q Consensus 274 ~~~~~iiH~Dlkp~Nil~~~~-------------------~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~ 320 (473)
++||+||||||+|||++.. +.+|++|||+++....... .......
T Consensus 98 --~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (793)
T PLN00181 98 --SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA 175 (793)
T ss_pred --hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccccc
Confidence 9999999999999999654 4456666666653211000 0001123
Q ss_pred cCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhh
Q 012014 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTM 400 (473)
Q Consensus 321 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (473)
.||+.|||||++.+..++.++|||||||+||||++|..|+.... ..+........+ +.
T Consensus 176 ~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~--------~~----------- 233 (793)
T PLN00181 176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLP--------PQ----------- 233 (793)
T ss_pred CCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcC--------hh-----------
Confidence 58899999999999999999999999999999999988865311 001111000000 00
Q ss_pred hcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 401 CMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
..........++.+||+.||.+|||+.||++
T Consensus 234 ----------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 234 ----------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred ----------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 0011223457888999999999999999975
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-26 Score=203.98 Aligned_cols=269 Identities=19% Similarity=0.276 Sum_probs=205.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 220 (473)
..-+|+++++||+|+||.++.|. +.++++||||.-. ......++..|.+..+.|. .++|..+|.+- +...+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP--rkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~ 98 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP--RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKY 98 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEecc--ccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccch
Confidence 34479999999999999999999 7789999999743 2234567889999988884 78999988663 44556
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-----c
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-----M 295 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-----~ 295 (473)
-.||+|++ |-||.|+..-.+. .|+.++.+.++.|++.-++|+| ++.+|.|||||+|+||... .
T Consensus 99 NiLVidLL-GPSLEDLFD~CgR--------~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n 166 (449)
T KOG1165|consen 99 NILVIDLL-GPSLEDLFDLCGR--------RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDAN 166 (449)
T ss_pred hhhhhhhh-CcCHHHHHHHhcC--------cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCc
Confidence 78999999 8899998865543 5889999999999999999999 9999999999999999643 4
Q ss_pred cEEEeecccccccCcccccc-----ceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccH
Q 012014 296 IGHVGDFGMARFLPAIDKQN-----RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNL 370 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~ 370 (473)
.+.++|||+|+.+.+..+.. ...+..||.+||+--...+...+..-|+=|||-++.+.+.|..||.|......
T Consensus 167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn-- 244 (449)
T KOG1165|consen 167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN-- 244 (449)
T ss_pred eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch--
Confidence 68999999999886654322 23456799999999999999999999999999999999999999998643321
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
. ...+.+-+...... ....+...|.++..-+.-.-+.+-.+-|..+-+...+.
T Consensus 245 K--------~kYeKIGe~Kr~T~-------------------i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~ 297 (449)
T KOG1165|consen 245 K--------EKYEKIGETKRSTP-------------------IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFD 297 (449)
T ss_pred H--------HHHHHhccccccCC-------------------HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 0 11111111111111 11223446777777777777788899999888777777
Q ss_pred HHHHhhccC
Q 012014 451 LIRRKLLET 459 (473)
Q Consensus 451 ~l~~~~~~~ 459 (473)
.+.+.+...
T Consensus 298 dvldr~g~t 306 (449)
T KOG1165|consen 298 DVLDRLGET 306 (449)
T ss_pred HHHHhcCCc
Confidence 776554433
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=9.1e-28 Score=243.54 Aligned_cols=254 Identities=20% Similarity=0.224 Sum_probs=183.6
Q ss_pred CccceeecCCCeEEEEEE-ecCCCEEEEEEeecc--CCCCc----hhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 148 SSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLI--RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
....++|.|++|.|+.+. ....+..+.|.+... ..... ..+..|.-+-..+.|||++..+..+.+.. .
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----G 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----c
Confidence 456789999999888776 333444555544311 11111 12556777777889999988877765432 1
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
..-.||||++ +|..++.... .+...++-.++.|++.|+.||| +.||.|||+||+|+++..+|.+||+
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~---------~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNG---------KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred chhhhhcccH-HHHHHHhccc---------ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEe
Confidence 2233999999 9999998763 2446778889999999999999 9999999999999999999999999
Q ss_pred ecccccccCccccc--cceeeccCCCCcCCCccccCCCCCcc-cchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 012014 301 DFGMARFLPAIDKQ--NRFICIKGSTGYIPPEYDLGCEASTY-GDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMA 377 (473)
Q Consensus 301 Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~ 377 (473)
|||.+..+...... ......+|+..|+|||++.+..|.+. .||||.|+++..|.+|+.||.-....+..+.. ..
T Consensus 463 Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~ 539 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NN 539 (601)
T ss_pred ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hc
Confidence 99999776544333 44566789999999999999998765 69999999999999999999765544432200 00
Q ss_pred cCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHH
Q 012014 378 LPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVES 447 (473)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 447 (473)
........ ..........+..-..++.++|+.||.+|-|+++|++
T Consensus 540 ~~~~~~~~-------------------------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 540 YSDQRNIF-------------------------EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccccc-------------------------cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000000 0011122345667778999999999999999999964
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=2.1e-26 Score=219.33 Aligned_cols=165 Identities=20% Similarity=0.176 Sum_probs=127.7
Q ss_pred ccCCCCccceeecCCCeEEEEEEec--CCCEEEEEEeeccC-----CCCchhHHHHHHHHHhcCCCCcee-eeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLF--DGTTIAVKVFNLIR-----PGGSKSFKSECKAAINIKHRNIVR-VFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~ 214 (473)
..++|.+.++||+|+||+||+|... +++.+|||++.... ......+.+|+++|.+++|+|++. ++++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 4568999999999999999999843 57788999865321 112456899999999999999985 4432
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC-CCCcEEecC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL-KPSNVLLDD 293 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl-kp~Nil~~~ 293 (473)
...++||||++|++|.. +.... ...++.|++.||.||| ++||+|||| ||+|||++.
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~~~~---------------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~ 147 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-ARPHG---------------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGP 147 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hCccc---------------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcC
Confidence 13599999999999963 21110 1357889999999999 999999999 999999999
Q ss_pred CccEEEeecccccccCccccccc------eeeccCCCCcCCCccccCC
Q 012014 294 EMIGHVGDFGMARFLPAIDKQNR------FICIKGSTGYIPPEYDLGC 335 (473)
Q Consensus 294 ~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 335 (473)
++.+||+|||+|+.+........ .....+++.|+|||.+...
T Consensus 148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999999987755332111 2356688999999987643
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=4.5e-26 Score=194.55 Aligned_cols=264 Identities=20% Similarity=0.258 Sum_probs=201.9
Q ss_pred ccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCC-CCceeeeeeeeccccCCcee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKH-RNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 220 (473)
..+.|.++++||+|+||.+|.|. ..+|..||||+-+. .....++..|.++...|+| ..|..+..+..+ ..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~--~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e-----~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS--KAKHPQLLYESKVYRILQGGVGIPHIRHYGTE-----KDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecc--cCCCcchhHHHHHHHHhccCCCCchhhhhccc-----ccc
Confidence 45789999999999999999999 77899999998542 2344578899999999975 567777666543 345
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC---CccE
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD---EMIG 297 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~---~~~~ 297 (473)
-.+||+++ |.||.++..-... .|+..+.+-++-|++.-++|+| .+++|||||||+|+|..- ...+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R--------~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl 153 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR--------RFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKL 153 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh--------hhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceE
Confidence 68999999 8899998865432 5889999999999999999999 999999999999999953 3468
Q ss_pred EEeecccccccCcccccc-----ceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcc--cH
Q 012014 298 HVGDFGMARFLPAIDKQN-----RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKM--NL 370 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~--~~ 370 (473)
.|+|||+|+.+-+..... ......||..|.+--...+...+...|+=|+|.+|.++..|..||.+...... -+
T Consensus 154 ~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKy 233 (341)
T KOG1163|consen 154 YLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKY 233 (341)
T ss_pred EEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHH
Confidence 899999999876543222 23355699999998888888888999999999999999999999998644321 11
Q ss_pred HHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 371 RNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
..+.+......+. ..+...|.++.-.+.-|-..--++-|...-+-+...
T Consensus 234 EkI~EkK~s~~ie-------------------------------~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 234 EKISEKKMSTPIE-------------------------------VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HHHHHhhcCCCHH-------------------------------HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 1111111111111 123345777888888888888888898877777777
Q ss_pred HHHHhh
Q 012014 451 LIRRKL 456 (473)
Q Consensus 451 ~l~~~~ 456 (473)
.|...+
T Consensus 283 iLfr~l 288 (341)
T KOG1163|consen 283 ILFRTL 288 (341)
T ss_pred HHHhhc
Confidence 776544
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=5.2e-25 Score=210.68 Aligned_cols=264 Identities=19% Similarity=0.191 Sum_probs=196.2
Q ss_pred CCCccceeecCCCeEEEEEEecC--CCEEEEEEeeccCCCCchhHHHHHHHHHhcCC----CCceeeeeeeeccccCCce
Q 012014 146 GFSSANLIGAGNFGSVYNGTLFD--GTTIAVKVFNLIRPGGSKSFKSECKAAINIKH----RNIVRVFTAFSGVDYQGAR 219 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 219 (473)
+|.+.++||+|+||.||.+.... ...+|+|............+..|..++..+.. +++.++++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 89999999999999999999544 35789988775443333378899999998873 68888887753 2344
Q ss_pred eeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-----
Q 012014 220 FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE----- 294 (473)
Q Consensus 220 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~----- 294 (473)
+.++||+.+ |.+|.++....... .|+..+.+.|+.|++.+|++|| +.|++||||||+|+++...
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~-------~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~ 163 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPG-------RFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEV 163 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCC-------CcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCccc
Confidence 679999988 88999988655421 5789999999999999999999 9999999999999999754
Q ss_pred ccEEEeeccccc--ccCccccc----c-c-eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCC
Q 012014 295 MIGHVGDFGMAR--FLPAIDKQ----N-R-FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366 (473)
Q Consensus 295 ~~~kl~Dfg~~~--~~~~~~~~----~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~ 366 (473)
..+.|.|||+++ .+...... . . .....||..|+++.+..+...+.+.|+||++.++.+++.|..||.+....
T Consensus 164 ~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~ 243 (322)
T KOG1164|consen 164 RTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT 243 (322)
T ss_pred ceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc
Confidence 468999999998 33222211 0 1 23456999999999999999999999999999999999999999765432
Q ss_pred cccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 367 KMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
.. ...+........... .....+..+.++...+-+.+..++|....+.
T Consensus 244 ~~-~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~ 291 (322)
T KOG1164|consen 244 DL-KSKFEKDPRKLLTDR-------------------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLA 291 (322)
T ss_pred ch-HHHHHHHhhhhcccc-------------------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence 21 111111000000000 0011344566666666668999999999999
Q ss_pred HHHHHHHHhh
Q 012014 447 SRLRLIRRKL 456 (473)
Q Consensus 447 ~~L~~l~~~~ 456 (473)
..|+.....-
T Consensus 292 ~~l~~~~~~~ 301 (322)
T KOG1164|consen 292 ELLKDVFDSE 301 (322)
T ss_pred HHHHHHHHhc
Confidence 9988876553
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.2e-27 Score=203.18 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=186.6
Q ss_pred CCccceeecCCCeEEEEEEecCCCEEEEEEeecc--CCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEE
Q 012014 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
.....+|.+...|+.|+|+|. |..++.|+++.. .....+.|..|.-.|+-+.||||..+++.|..+ ..+.++
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~i 265 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVII 265 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEe
Confidence 345567889999999999974 456667887632 334456799999999999999999999998654 467899
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe--ec
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DF 302 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~--Df 302 (473)
..||+.|+|...|+..... -..-.++.+++.++++|++|||+- ..-|.---|.+..+++|++.+++|+ |-
T Consensus 266 sq~mp~gslynvlhe~t~v-------vvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTSV-------VVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred eeeccchHHHHHHhcCccE-------EEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccc
Confidence 9999999999999887532 344678999999999999999954 3334455688999999999988774 32
Q ss_pred ccccccCccccccceeeccCCCCcCCCccccCCCC---CcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcC
Q 012014 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA---STYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALP 379 (473)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 379 (473)
-++.. .....-.|.||+||.+...+- -.++|+|||.+++|||.|+..||......+-....-+...
T Consensus 338 kfsfq---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl-- 406 (448)
T KOG0195|consen 338 KFSFQ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL-- 406 (448)
T ss_pred eeeee---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc--
Confidence 22211 111123788999999987653 3568999999999999999999987654432222111111
Q ss_pred cchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHHH
Q 012014 380 QRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLIR 453 (473)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l~ 453 (473)
+..+++.....+.+|+.-|++.||.+||.+..|+-.||++.
T Consensus 407 ---------------------------------rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 407 ---------------------------------RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ---------------------------------cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11122335567889999999999999999999999999874
No 412
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.91 E-value=1.8e-24 Score=191.53 Aligned_cols=177 Identities=11% Similarity=0.094 Sum_probs=135.0
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchh---------HHHHHHHHHhcCCCCceeeeeeeecc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---------FKSECKAAINIKHRNIVRVFTAFSGV 213 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~ 213 (473)
..++|+..++||.|+||.||++.. ++..+|+|++.......... +.+|+..+.++.||+|....+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 367899999999999999999765 67789999997544333322 67999999999999999999886643
Q ss_pred ccCC---ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 214 DYQG---ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 214 ~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
.... ....+++|||++|.+|.++.. ++. ....+++.+|..+| +.|++|||+||+||+
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nil 167 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFI 167 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEE
Confidence 3211 235789999999999988732 112 24569999999999 999999999999999
Q ss_pred ecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh
Q 012014 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 355 (473)
++.++ ++|+|||.+......... ..+.....+..++|+||||+++..+..
T Consensus 168 i~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 168 VSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EeCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 99988 999999988654221100 013334456678999999999876643
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=8.1e-23 Score=197.06 Aligned_cols=259 Identities=26% Similarity=0.369 Sum_probs=193.5
Q ss_pred CCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCCC-CceeeeeeeeccccCCceeeE
Q 012014 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKHR-NIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~~ 222 (473)
|.....||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +|+++++.+... ...+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~~ 74 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-----GSLY 74 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC-----CEEE
Confidence 667788999999999999855 88999998754433 356789999999999988 799999998332 2369
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-cEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~~kl~D 301 (473)
++++++.++++.+++...... ..+.......++.|++.++.|+| ..+++|||+||+||+++..+ .++++|
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~d 145 (384)
T COG0515 75 LVMEYVDGGSLEDLLKKIGRK------GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLID 145 (384)
T ss_pred EEEecCCCCcHHHHHHhcccc------cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEec
Confidence 999999999999777655321 13557888999999999999999 89999999999999999988 799999
Q ss_pred cccccccCcccccc----ceeeccCCCCcCCCccccC---CCCCcccchhhHhHHHHHHHhCCCCCCCCCCC--cccHHH
Q 012014 302 FGMARFLPAIDKQN----RFICIKGSTGYIPPEYDLG---CEASTYGDVYSFGILLLEMFTGIRPSDGIFTG--KMNLRN 372 (473)
Q Consensus 302 fg~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~~~~~--~~~~~~ 372 (473)
||.++......... ......||..|+|||.+.+ ..++...|+||+|++++++++|..||...... ......
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 225 (384)
T COG0515 146 FGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225 (384)
T ss_pred cCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH
Confidence 99998654433221 2355679999999999987 57888999999999999999999997654321 111111
Q ss_pred HHHhhcCc-chhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHH
Q 012014 373 FVKMALPQ-RAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESR 448 (473)
Q Consensus 373 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 448 (473)
.+...... ........ ........+.+++..|+..+|..|.+..+....
T Consensus 226 ~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTPSLASPLSPS---------------------------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCcccccccCcc---------------------------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111111 00000000 001234567789999999999999998887765
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=2.1e-23 Score=183.00 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=106.3
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCC--C-------chh-----------------HHHHHHHHHhcCCCCc
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--G-------SKS-----------------FKSECKAAINIKHRNI 203 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni 203 (473)
...||+|+||.||+|...+|+.||+|+++..... . ... ..+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999768999999999754221 1 112 2349999999988776
Q ss_pred eeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHH-hhCCCCCeeec
Q 012014 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL-HCDCQPPIAHC 282 (473)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~L-H~~~~~~iiH~ 282 (473)
.....+.. ...++||||++++++...+.... .++..++..++.|++.+|.++ | +.||+||
T Consensus 82 ~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~---------~~~~~~~~~i~~qi~~~L~~l~H---~~giiHr 142 (190)
T cd05147 82 PCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDA---------PLSESKARELYLQVIQIMRILYQ---DCRLVHA 142 (190)
T ss_pred CCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcC---------CCCHHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 43332211 12389999998887765432222 355788999999999999999 8 8899999
Q ss_pred cCCCCcEEecCCccEEEeeccccccc
Q 012014 283 NLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 283 Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
||||+||+++ ++.++|+|||+|...
T Consensus 143 DlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 143 DLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCCHHHEEEE-CCcEEEEEccccccC
Confidence 9999999998 478999999999754
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=3.8e-22 Score=175.85 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=107.9
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--------------------------chhHHHHHHHHHhcCCCCc
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--------------------------SKSFKSECKAAINIKHRNI 203 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~ni 203 (473)
...||+|+||.||+|...+|+.||||+++...... ...+.+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999996689999999998542110 1123578999999999987
Q ss_pred eeeeeeeeccccCCceeeEEEEEecCCCCHHHH-hcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeee
Q 012014 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW-LRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAH 281 (473)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH 281 (473)
.....+... ..++||||++++++... +... .++..+...++.|++.+|.++| + +||+|
T Consensus 82 ~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~~----------~~~~~~~~~i~~~l~~~l~~lH---~~~givH 141 (190)
T cd05145 82 PVPEPILLK-------KNVLVMEFIGDDGSPAPRLKDV----------PLEEEEAEELYEQVVEQMRRLY---QEAGLVH 141 (190)
T ss_pred CCceEEEec-------CCEEEEEEecCCCchhhhhhhc----------cCCHHHHHHHHHHHHHHHHHHH---HhCCEec
Confidence 544333211 23899999988855433 3322 2446788999999999999999 7 99999
Q ss_pred ccCCCCcEEecCCccEEEeecccccccC
Q 012014 282 CNLKPSNVLLDDEMIGHVGDFGMARFLP 309 (473)
Q Consensus 282 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 309 (473)
|||||+||+++ ++.++|+|||+++...
T Consensus 142 rDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 142 GDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999 7899999999998654
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=9.4e-22 Score=170.26 Aligned_cols=187 Identities=13% Similarity=-0.009 Sum_probs=138.6
Q ss_pred CccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC----CchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceeeE
Q 012014 148 SSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG----GSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++|.+|. |+++++++++. ..+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~~ 74 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GRH 74 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CEE
Confidence 4567899999999998764 7888888877643221 1125789999999995 58899998762 348
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC-CCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL-KPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl-kp~Nil~~~~~~~kl~D 301 (473)
++|||+.|.+|.+.+.. ....++.|++.+|.++| ++||+|||| ||+|||++.++.++|+|
T Consensus 75 lvmeyI~G~~L~~~~~~----------------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 75 LDRSYLAGAAMYQRPPR----------------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred EEEeeecCccHHhhhhh----------------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEE
Confidence 99999999998754321 11347789999999999 999999999 79999999999999999
Q ss_pred cccccccCccccc----cc-------eeeccCCCCcCCCccccCC-CCC-cccchhhHhHHHHHHHhCCCCCCCC
Q 012014 302 FGMARFLPAIDKQ----NR-------FICIKGSTGYIPPEYDLGC-EAS-TYGDVYSFGILLLEMFTGIRPSDGI 363 (473)
Q Consensus 302 fg~~~~~~~~~~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~~DiwSlG~il~elltg~~P~~~~ 363 (473)
||++......... .. ..-...++.|++|+...-- ..+ ...+.++.|.-+|.++|+..|+-+.
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 9999865432210 00 0012257788888753321 223 4568999999999999999887554
No 417
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.7e-22 Score=182.36 Aligned_cols=203 Identities=23% Similarity=0.236 Sum_probs=143.5
Q ss_pred CCCCceeeeeeeeccc----------------------cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHH
Q 012014 199 KHRNIVRVFTAFSGVD----------------------YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256 (473)
Q Consensus 199 ~h~niv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 256 (473)
+|||||+++++|.+.- +.....+|+||.-. ..+|.+|+-.+.. +...
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~~----------s~r~ 342 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRHR----------SYRT 342 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCCC----------chHH
Confidence 6999999999885431 22345679999988 4599999977643 3566
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEe--cCCc--cEEEeecccccccCcccc----ccceeeccCCCCcCC
Q 012014 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL--DDEM--IGHVGDFGMARFLPAIDK----QNRFICIKGSTGYIP 328 (473)
Q Consensus 257 ~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~--~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~~~gt~~y~a 328 (473)
..-++.|+++|+.||| .+||.|||+|++|||+ |+++ .+.|+|||++-.-....- .......-|...-||
T Consensus 343 ~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmA 419 (598)
T KOG4158|consen 343 GRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMA 419 (598)
T ss_pred HHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecc
Confidence 7778999999999999 9999999999999999 4444 578999998743222111 111122347778999
Q ss_pred CccccCCC------CCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhc
Q 012014 329 PEYDLGCE------ASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCM 402 (473)
Q Consensus 329 PE~~~~~~------~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (473)
||+....+ .-.|+|.|+.|.+.||+++...||.+..........+-+...
T Consensus 420 PEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL------------------------ 475 (598)
T KOG4158|consen 420 PEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL------------------------ 475 (598)
T ss_pred hhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC------------------------
Confidence 99876533 235789999999999999999999862211111111111111
Q ss_pred ccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHH
Q 012014 403 EVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLR 450 (473)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 450 (473)
+..+..++..+.+|+...|+.||++|||..=....|+
T Consensus 476 -----------Palp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 476 -----------PALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred -----------CCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 1122346677889999999999999999765555544
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2e-23 Score=202.02 Aligned_cols=186 Identities=26% Similarity=0.266 Sum_probs=153.6
Q ss_pred eeecCCCeEEEEEEe----cCCCEEEEEEeeccCCC--CchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceeeEEE
Q 012014 152 LIGAGNFGSVYNGTL----FDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFKAVV 224 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 224 (473)
++|+|+||.|++++. ..|..+|+|+++..... .......|..++...+ ||.+|++...|.. ....+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-----~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-----DGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-----ccchhHh
Confidence 479999999998762 34678899988753322 2225567888888886 9999999988643 4467999
Q ss_pred EEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 225 YKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 225 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
++|..+|+|...+.... .+.......+...++-|++++| +.+|+|||+|++||+++.+|++++.|||+
T Consensus 76 ld~~rgg~lft~l~~~~---------~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfgl 143 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEV---------MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGL 143 (612)
T ss_pred hhhcccchhhhccccCC---------chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchh
Confidence 99999999998887665 3456677778889999999999 99999999999999999999999999999
Q ss_pred ccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
++..-..... +||..|||||++. ....++|.||||++++||+||..||.+
T Consensus 144 ske~v~~~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 144 SKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhHhHhhhhc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 9876432221 7999999999998 577889999999999999999999986
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.86 E-value=3.1e-21 Score=170.63 Aligned_cols=140 Identities=23% Similarity=0.267 Sum_probs=106.0
Q ss_pred CccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-----CCCCceeeeeeeeccccCCceeeE
Q 012014 148 SSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----KHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 148 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
....+||+|+||.||. ...++.. +||++........+.+.+|+.++..+ +||||+++++++.+.. .......
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~-g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC-GTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC-CCeEEEE
Confidence 4467899999999996 3233444 68988765444567899999999999 6799999999986642 1122244
Q ss_pred EEEEe--cCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHH-HHHhhCCCCCeeeccCCCCcEEecC----Cc
Q 012014 223 VVYKF--MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACAL-RYLHCDCQPPIAHCNLKPSNVLLDD----EM 295 (473)
Q Consensus 223 lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L-~~LH~~~~~~iiH~Dlkp~Nil~~~----~~ 295 (473)
+|+|| +.+|+|.+++.... +++. ..++.|++.++ +||| +++|+||||||+|||++. ++
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~----------~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR----------YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred EEecCCCCcchhHHHHHHccc----------ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCC
Confidence 78999 55799999996532 2233 35678888888 9999 999999999999999974 34
Q ss_pred cEEEeecccc
Q 012014 296 IGHVGDFGMA 305 (473)
Q Consensus 296 ~~kl~Dfg~~ 305 (473)
.++|+||+.+
T Consensus 147 ~~~LiDg~G~ 156 (210)
T PRK10345 147 IPVVCDNIGE 156 (210)
T ss_pred cEEEEECCCC
Confidence 7999995443
No 420
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-21 Score=189.42 Aligned_cols=219 Identities=23% Similarity=0.293 Sum_probs=157.9
Q ss_pred HHhcCCCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhC
Q 012014 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCD 274 (473)
Q Consensus 195 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~ 274 (473)
|+.+.|.|+.+++|.+.+. ...++|.+||..|+|.+.+..... .+.+.-...++++|+.||.|||
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~--------~~d~~F~~s~~rdi~~Gl~ylh-- 65 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDI--------KLDYFFILSFIRDISKGLAYLH-- 65 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhcccc--------CccHHHHHHHHHHHHHHHHHHh--
Confidence 3568999999999998664 467999999999999999987432 3446667778999999999999
Q ss_pred CCCCe-eeccCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCC-------CCcccchhhH
Q 012014 275 CQPPI-AHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-------ASTYGDVYSF 346 (473)
Q Consensus 275 ~~~~i-iH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DiwSl 346 (473)
...| .|+.+++.|.++|....+||+|||+.................-..-|.|||.+.+.. .+.+.|||||
T Consensus 66 -~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~ 144 (484)
T KOG1023|consen 66 -NSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF 144 (484)
T ss_pred -cCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence 4444 999999999999999999999999987764311111111112345699999987641 4667899999
Q ss_pred hHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHH
Q 012014 347 GILLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICE 426 (473)
Q Consensus 347 G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 426 (473)
|++++|+++...||+........ ...+..... .......+.+.. ..+.++.+..
T Consensus 145 ~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-~~~~~~rP~i~~------------------------~~e~~~~l~~ 198 (484)
T KOG1023|consen 145 GIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-GGSNPFRPSIEL------------------------LNELPPELLL 198 (484)
T ss_pred HHHHHHHHhccCccccccccCCh-HHHHHHHHh-cCCCCcCcchhh------------------------hhhcchHHHH
Confidence 99999999999999864333221 111111000 001111110000 0134557899
Q ss_pred HhhhcccCCCCCCCChHHHHHHHHHHHHh
Q 012014 427 IGVACSAERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 427 l~~~cl~~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
++.+||..+|.+||++.+|-..++.+...
T Consensus 199 l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 199 LVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred HHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 99999999999999999999999988654
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1.9e-22 Score=205.02 Aligned_cols=250 Identities=20% Similarity=0.234 Sum_probs=176.2
Q ss_pred CCCccceeecCCCeEEEEEEecCCCEEEEEEeeccC-CCCchhHHHHHHH--HHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKA--AINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+|...+.||++.|=.|.+|+.+.|. |+||++-+.. .-..+.+.++++- ...++|||.+.+.-+- ......|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~-----~t~kAAy 97 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL-----VTDKAAY 97 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH-----HhhHHHH
Confidence 5677788999999999999977777 9999997544 2334445443333 4556899999887653 3344568
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
||=+|.. -+|.|.|..+. .+..-+..-|+.|++.||..+| ..||+|||||.+||||+.-..+.|+||
T Consensus 98 lvRqyvk-hnLyDRlSTRP---------FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDF 164 (1431)
T KOG1240|consen 98 LVRQYVK-HNLYDRLSTRP---------FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDF 164 (1431)
T ss_pred HHHHHHh-hhhhhhhccch---------HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcc
Confidence 8888884 48999887654 4557778889999999999999 999999999999999999999999999
Q ss_pred ccccc--cCccccccc---eeeccCCCCcCCCccccCC----------C-CCcccchhhHhHHHHHHHh-CCCCCCCCCC
Q 012014 303 GMARF--LPAIDKQNR---FICIKGSTGYIPPEYDLGC----------E-ASTYGDVYSFGILLLEMFT-GIRPSDGIFT 365 (473)
Q Consensus 303 g~~~~--~~~~~~~~~---~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwSlG~il~ellt-g~~P~~~~~~ 365 (473)
..-+. ++.+....- ..+...-..|.|||.+... . .+++.||||+||+++||++ |++||.-
T Consensus 165 AsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--- 241 (1431)
T KOG1240|consen 165 ASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--- 241 (1431)
T ss_pred cccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---
Confidence 87653 222221111 1111122359999976431 2 5778899999999999999 7888852
Q ss_pred CcccHHHHHHhhc--CcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChH
Q 012014 366 GKMNLRNFVKMAL--PQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKIN 443 (473)
Q Consensus 366 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 443 (473)
.+...-.. ....+.+ +..++ ...+..|+..|++.||.+|.|++
T Consensus 242 -----SQL~aYr~~~~~~~e~~-----Le~Ie-------------------------d~~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 242 -----SQLLAYRSGNADDPEQL-----LEKIE-------------------------DVSLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred -----HHHHhHhccCccCHHHH-----HHhCc-------------------------CccHHHHHHHHHccCchhccCHH
Confidence 22111100 0011111 11111 12567899999999999999999
Q ss_pred HHHHHHHHH
Q 012014 444 DVESRLRLI 452 (473)
Q Consensus 444 ev~~~L~~l 452 (473)
+.++.-+++
T Consensus 287 dyL~~yrG~ 295 (1431)
T KOG1240|consen 287 DYLQKYRGL 295 (1431)
T ss_pred HHHHhhhcc
Confidence 999885554
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=1.6e-21 Score=178.03 Aligned_cols=239 Identities=19% Similarity=0.224 Sum_probs=147.2
Q ss_pred CCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCC---CchhHHHHHHHHHhcCC----------CCceeeeeeee
Q 012014 146 GFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG---GSKSFKSECKAAINIKH----------RNIVRVFTAFS 211 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h----------~niv~~~~~~~ 211 (473)
.+.....||.|+++.||.++. .+|+.+|+|++...... ..+.+++|.-....+.+ -.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 345678899999999999994 56899999999744322 23455555544333222 11111111111
Q ss_pred c--------ccc-CCce---eeEEEEEecCCCCHHHHhcC---CCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC
Q 012014 212 G--------VDY-QGAR---FKAVVYKFMPNGSLEEWLRG---KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ 276 (473)
Q Consensus 212 ~--------~~~-~~~~---~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~ 276 (473)
- ... .+.. ..+++|+-+ .+||.+++.. .... ...+....++.+..|+++.+++|| +
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-----~~~l~~~arl~lT~Q~I~lvA~Lh---~ 163 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-----HSPLAFAARLSLTVQMIRLVANLH---S 163 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-----SHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-----cchhHHHHHHHHHHHHHHHHHHHh---h
Confidence 0 000 0011 246788877 6788887643 2211 123445556778899999999999 9
Q ss_pred CCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCCcCCCccccC--------CCCCcccchhhHhH
Q 012014 277 PPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG--------CEASTYGDVYSFGI 348 (473)
Q Consensus 277 ~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~ 348 (473)
.|++|+||+|+|++++.+|.++|+||+.....+... .....+..|.+||.... ..++.+.|.|+||+
T Consensus 164 ~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 164 YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred cceEecccceeeEEEcCCCCEEEcChHHHeecCcee-----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999999998876543311 11234677999997543 24788899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHh
Q 012014 349 LLLEMFTGIRPSDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIG 428 (473)
Q Consensus 349 il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 428 (473)
++|.|++|..||........... .+ ..+.+.++.+..|+
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~---------------------~f--------------------~~C~~~Pe~v~~LI 277 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEW---------------------DF--------------------SRCRDMPEPVQFLI 277 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGG---------------------GG--------------------TTSS---HHHHHHH
T ss_pred HHHHHHHccCCCCCCCccccccc---------------------cc--------------------hhcCCcCHHHHHHH
Confidence 99999999999986432221000 10 11225788999999
Q ss_pred hhcccCCCCCC
Q 012014 429 VACSAERPRER 439 (473)
Q Consensus 429 ~~cl~~dP~~R 439 (473)
..+|+.||.+|
T Consensus 278 ~~lL~~~~~~R 288 (288)
T PF14531_consen 278 RGLLQRNPEDR 288 (288)
T ss_dssp HHHT-SSGGGS
T ss_pred HHHccCCcccC
Confidence 99999999988
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=8.1e-21 Score=196.68 Aligned_cols=197 Identities=21% Similarity=0.207 Sum_probs=152.0
Q ss_pred cccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC---CCCceeeeeeeeccccCCc
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK---HRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~ 218 (473)
.....|.+.+.||+|+||.||+|...+|+.||+|+=+.. ..-+|.-=.+++.+|+ -+-|.++..++.- +
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~---~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~---~-- 766 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP---NPWEFYICLQVMERLKPQMLPSIMHISSAHVF---Q-- 766 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCC---CceeeeehHHHHHhhchhhhcchHHHHHHHcc---C--
Confidence 334568889999999999999999777999999986532 2233333344555555 1233333333221 1
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec------
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD------ 292 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~------ 292 (473)
..-+||+||.+.|+|.+++.... .+.+.-.+.++.|++.-+++|| ..+|||+||||+|.||.
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~---------~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~ 834 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNK---------VMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICAD 834 (974)
T ss_pred CcceeeeeccccccHHHhhccCC---------CCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCC
Confidence 23379999999999999998544 3447778889999999999999 99999999999999993
Q ss_pred -CCccEEEeecccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCC
Q 012014 293 -DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358 (473)
Q Consensus 293 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~ 358 (473)
++..++|+|||.+-.+.--.........++|-.+-.+|+..|.+++...|.|.|..+++.|+.|++
T Consensus 835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 244689999999965544344456667788999999999999999999999999999999999864
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=9e-20 Score=165.49 Aligned_cols=141 Identities=15% Similarity=0.078 Sum_probs=108.8
Q ss_pred CCCccceeecCCCeEEEEEE--ecCCCEEEEEEeeccCCCC------------------------chhHHHHHHHHHhcC
Q 012014 146 GFSSANLIGAGNFGSVYNGT--LFDGTTIAVKVFNLIRPGG------------------------SKSFKSECKAAINIK 199 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 199 (473)
.|++.+.||+|+||.||+|. ..+|+.||+|+++...... ...+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 5689999999987432110 012568999999997
Q ss_pred CC--CceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCC
Q 012014 200 HR--NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQP 277 (473)
Q Consensus 200 h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~ 277 (473)
+. .+.++++.. ..++||||+++++|..+..... .+...+...++.|++.+|.+|| ++
T Consensus 109 ~~~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~LH---~~ 167 (237)
T smart00090 109 EAGVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDV---------EPEEEEEFELYDDILEEMRKLY---KE 167 (237)
T ss_pred hcCCCCCeeeEec---------CceEEEEEecCCcccccccccC---------CcchHHHHHHHHHHHHHHHHHH---hc
Confidence 53 344444321 2389999999988876543222 1235567789999999999999 99
Q ss_pred C-eeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 278 P-IAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 278 ~-iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
| |+||||||+||+++ ++.++|+|||.+...
T Consensus 168 g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 168 GELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9 99999999999999 889999999998754
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=7.1e-21 Score=181.06 Aligned_cols=125 Identities=26% Similarity=0.425 Sum_probs=106.6
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
.++++.|++|...+|.+||........ -++...+.++.|++.|+.| ++.+|||+||.||+...+..+|
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~------~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEE------RSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccc------cchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhh
Confidence 357999999999999999986654432 3366788899999999998 5899999999999999999999
Q ss_pred EeecccccccCccc----cccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHh
Q 012014 299 VGDFGMARFLPAID----KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355 (473)
Q Consensus 299 l~Dfg~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 355 (473)
|+|||+........ .....+...||..||+||.+.+..|+.++||||||++|+|++.
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99999987665433 1223455679999999999999999999999999999999998
No 426
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.81 E-value=1e-20 Score=192.43 Aligned_cols=213 Identities=22% Similarity=0.247 Sum_probs=145.9
Q ss_pred hhcccCCCCccceeecCCCeEEEEEEe-cCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCc
Q 012014 140 LYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 140 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 218 (473)
.....++|..++.|..|+||.||.++. .+.+++|+|+=+ ..-+.+ ||..+-+
T Consensus 78 ~~p~e~df~~IklisngAygavylvrh~~trqrfa~kiNk------q~lilR-----------nilt~a~---------- 130 (1205)
T KOG0606|consen 78 RAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK------QNLILR-----------NILTFAG---------- 130 (1205)
T ss_pred cCCCccccceeEeeccCCCCceeeeeccccccchhhcccc------cchhhh-----------ccccccC----------
Confidence 344567899999999999999999984 356788885422 111111 1222211
Q ss_pred eeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEE
Q 012014 219 RFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH 298 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~k 298 (473)
..+.| |+-...++..+.. + .+++.+++||| +.||+|||+||+|.+|+.-|++|
T Consensus 131 -npfvv------gDc~tllk~~g~l---------P--------vdmvla~Eylh---~ygivhrdlkpdnllIT~mGhiK 183 (1205)
T KOG0606|consen 131 -NPFVV------GDCATLLKNIGPL---------P--------VDMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIK 183 (1205)
T ss_pred -Cccee------chhhhhcccCCCC---------c--------chhhHHhHhhc---cCCeecCCCCCCcceeeeccccc
Confidence 12333 4444445443321 1 12377999999 99999999999999999999999
Q ss_pred EeecccccccCcc-------------ccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCC
Q 012014 299 VGDFGMARFLPAI-------------DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFT 365 (473)
Q Consensus 299 l~Dfg~~~~~~~~-------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~ 365 (473)
+.|||+++..-.. ...-.....+||+.|.|||++....|+..+|+|++|+|+||.+-|..||.+...
T Consensus 184 lTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 184 LTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred ccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 9999998753211 011123456899999999999999999999999999999999999999987422
Q ss_pred CcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCC
Q 012014 366 GKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERM 440 (473)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 440 (473)
++ .+..++...+ . .++.....+.+..+++.+.|+.+|.+|-
T Consensus 264 ee-lfg~visd~i----------------~-----------------wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 264 EE-LFGQVISDDI----------------E-----------------WPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred HH-HHhhhhhhhc----------------c-----------------ccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 21 1222222111 0 0111223466778899999999999995
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=9e-19 Score=157.60 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=109.0
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--------chhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeE
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--------SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 222 (473)
+.||+|++|.||+|.. +|..+++|+........ ...+.+|+.++..+.|++|+....++... ...+
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENFI 75 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCCE
Confidence 5799999999999986 77889999865332211 13577899999999999887666555332 2458
Q ss_pred EEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeec
Q 012014 223 VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDF 302 (473)
Q Consensus 223 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Df 302 (473)
++|||++|++|.+++.... . ....++.+++.+|.++| +.+++|+|++|.||+++ ++.++|+||
T Consensus 76 lv~e~~~G~~L~~~~~~~~------------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf 138 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSNG------------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDF 138 (211)
T ss_pred EEEEEeCCcCHHHHHHhcc------------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEEC
Confidence 9999999999999986432 2 67789999999999999 99999999999999999 788999999
Q ss_pred ccccc
Q 012014 303 GMARF 307 (473)
Q Consensus 303 g~~~~ 307 (473)
|.+..
T Consensus 139 ~~a~~ 143 (211)
T PRK14879 139 GLAEF 143 (211)
T ss_pred CcccC
Confidence 98864
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=6.2e-19 Score=156.72 Aligned_cols=138 Identities=20% Similarity=0.135 Sum_probs=108.0
Q ss_pred CCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC----------------------CchhHHHHHHHHHhcCCCC
Q 012014 145 NGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG----------------------GSKSFKSECKAAINIKHRN 202 (473)
Q Consensus 145 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~n 202 (473)
..|.+.+.||+|+||.||++...+|+.||||++...... .......|..++..+.|++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 347788999999999999999778999999987643210 0113567888899888774
Q ss_pred --ceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCee
Q 012014 203 --IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIA 280 (473)
Q Consensus 203 --iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ii 280 (473)
++..++. ...++||||+++++|.+.... .....++.+++.++.++| ..+|+
T Consensus 95 i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~---------------~~~~~~~~~i~~~l~~lh---~~gi~ 147 (198)
T cd05144 95 FPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL---------------EDPEEVLDEILEEIVKAY---KHGII 147 (198)
T ss_pred CCCCceeec---------CCceEEEEEeCCcchhhcccc---------------ccHHHHHHHHHHHHHHHH---HCCCC
Confidence 4444432 134899999999999765431 223568889999999999 89999
Q ss_pred eccCCCCcEEecCCccEEEeecccccccC
Q 012014 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLP 309 (473)
Q Consensus 281 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 309 (473)
||||||+||+++.++.++|+|||++....
T Consensus 148 H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999996543
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=3.9e-18 Score=151.96 Aligned_cols=130 Identities=17% Similarity=0.249 Sum_probs=102.3
Q ss_pred eeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--------chhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEE
Q 012014 152 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--------SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAV 223 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 223 (473)
.||+|+||.||+|. .++..+++|......... ...+.+|++++..+.|+++.....++... ...++
T Consensus 1 ~ig~G~~~~vy~~~-~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~l 74 (199)
T TIGR03724 1 LIAKGAEAIIYLGD-FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKTI 74 (199)
T ss_pred CCCCCceEEEEEee-cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCEE
Confidence 48999999999998 467899999865322111 24567899999999887654433333221 23589
Q ss_pred EEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecc
Q 012014 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 224 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|||++|++|.+++.... . .++.+++.+|.+|| +.+++|+|++|.||+++ ++.++++|||
T Consensus 75 v~e~~~g~~l~~~~~~~~------------~----~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg 134 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN------------D----ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFG 134 (199)
T ss_pred EEEEECCccHHHHHhhcH------------H----HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECC
Confidence 999999999999875431 1 68999999999999 99999999999999999 7899999999
Q ss_pred cccc
Q 012014 304 MARF 307 (473)
Q Consensus 304 ~~~~ 307 (473)
++..
T Consensus 135 ~a~~ 138 (199)
T TIGR03724 135 LGKY 138 (199)
T ss_pred CCcC
Confidence 8864
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=6.4e-18 Score=172.63 Aligned_cols=138 Identities=17% Similarity=0.228 Sum_probs=107.5
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeecc--CCC------CchhHHHHHHHHHhcCCCCceeeeeeeeccc
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLI--RPG------GSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 214 (473)
....|...+.||+|+||.||+|.+.. ..+++|+.... ... ..+.+.+|++++..++|++++....++.+.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 34456778999999999999998544 34444443211 111 124578999999999999998876655432
Q ss_pred cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC
Q 012014 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294 (473)
Q Consensus 215 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~ 294 (473)
...++||||+++++|.+++. ....++.+++.+|.+|| +.+++||||||+||++ ++
T Consensus 409 ----~~~~lv~E~~~g~~L~~~l~-----------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~ 463 (535)
T PRK09605 409 ----EEKTIVMEYIGGKDLKDVLE-----------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RD 463 (535)
T ss_pred ----CCCEEEEEecCCCcHHHHHH-----------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-EC
Confidence 24589999999999998874 23568999999999999 9999999999999999 57
Q ss_pred ccEEEeecccccc
Q 012014 295 MIGHVGDFGMARF 307 (473)
Q Consensus 295 ~~~kl~Dfg~~~~ 307 (473)
+.++|+|||+++.
T Consensus 464 ~~~~liDFGla~~ 476 (535)
T PRK09605 464 DRLYLIDFGLGKY 476 (535)
T ss_pred CcEEEEeCccccc
Confidence 7899999999974
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=4.9e-17 Score=143.34 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=96.1
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCC--Cchh----------------------HHHHHHHHHhcCCCC--c
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKS----------------------FKSECKAAINIKHRN--I 203 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i 203 (473)
.+.||+|+||.||+|...+++.||||+++..... .... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999778999999998743221 1111 134555555554332 3
Q ss_pred eeeeeeeeccccCCceeeEEEEEecCCCCHHHH-hcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCC-CCeee
Q 012014 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW-LRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ-PPIAH 281 (473)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~iiH 281 (473)
.+.+++. ..++||||++++++... +.... . ..++..++.+++.++.++| . .+|+|
T Consensus 82 ~~~~~~~---------~~~lv~e~~~g~~~~~~~l~~~~----------~-~~~~~~~~~~~~~~l~~lh---~~~~ivH 138 (187)
T cd05119 82 PKPIDLN---------RHVLVMEFIGGDGIPAPRLKDVR----------L-LEDPEELYDQILELMRKLY---REAGLVH 138 (187)
T ss_pred CceEecC---------CCEEEEEEeCCCCccChhhhhhh----------h-cccHHHHHHHHHHHHHHHh---hccCcCc
Confidence 4444321 24899999998553211 11110 0 1456789999999999999 7 99999
Q ss_pred ccCCCCcEEecCCccEEEeeccccccc
Q 012014 282 CNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 282 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
+||||+||+++ ++.++|+|||.+...
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccc
Confidence 99999999999 899999999999754
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=8.3e-19 Score=178.41 Aligned_cols=256 Identities=21% Similarity=0.229 Sum_probs=187.3
Q ss_pred cCCCCccceeecCCCeEEEEEEec--CCCEEEEEEeeccC--CCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCc
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLF--DGTTIAVKVFNLIR--PGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGA 218 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 218 (473)
...|.+.+.||+|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++++++.... .
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-----~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-----P 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-----C
Confidence 456777888999999999888743 34456666665432 223344556777777776 9999999988544 4
Q ss_pred eeeEEEEEecCCCCHHHHhc-CCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc-c
Q 012014 219 RFKAVVYKFMPNGSLEEWLR-GKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-I 296 (473)
Q Consensus 219 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~-~ 296 (473)
...+++++|..++++.+-+. .... ..+...+-.++.|+..++.|+|. ..++.||||||+|.+++.++ .
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~--------~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~ 163 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDST--------GTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSA 163 (601)
T ss_pred cccccccCcccccccccccccCCcc--------CCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCc
Confidence 46799999999999998883 3221 12345566789999999999995 57899999999999999999 9
Q ss_pred EEEeecccccccCc-cccccceeeccC-CCCcCCCccccCC-CCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHH
Q 012014 297 GHVGDFGMARFLPA-IDKQNRFICIKG-STGYIPPEYDLGC-EASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNF 373 (473)
Q Consensus 297 ~kl~Dfg~~~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~ 373 (473)
.+++|||+|..+.. ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+.........+..|
T Consensus 164 l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~ 243 (601)
T KOG0590|consen 164 LKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSW 243 (601)
T ss_pred ccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceee
Confidence 99999999998776 444455556678 9999999998884 45677899999999999999999998765544332222
Q ss_pred HHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 374 VKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
......... .. -........+++..++..+|..|.+.+++-
T Consensus 244 ~~~~~~~~~------~~--------------------------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 244 KSNKGRFTQ------LP--------------------------WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccccc------Cc--------------------------cccCChhhhhcccccccCCchhcccccccc
Confidence 221100000 00 011233556788889989999999988764
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.69 E-value=3.8e-16 Score=142.11 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=104.9
Q ss_pred cceee-cCCCeEEEEEEecCCCEEEEEEeeccC-------------CCCchhHHHHHHHHHhcCCCCc--eeeeeeeecc
Q 012014 150 ANLIG-AGNFGSVYNGTLFDGTTIAVKVFNLIR-------------PGGSKSFKSECKAAINIKHRNI--VRVFTAFSGV 213 (473)
Q Consensus 150 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 213 (473)
...|| .||.|+||.+.. .+..++||.+.... ......+.+|+.++.++.|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 899999999985 47889999885311 1223467889999999998875 6666654322
Q ss_pred ccCCceeeEEEEEecCC-CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEec
Q 012014 214 DYQGARFKAVVYKFMPN-GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD 292 (473)
Q Consensus 214 ~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~ 292 (473)
. ......++|||+++| .+|.+++.... ++.. .+.+++.+|.+|| ++||+||||||.|||++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~~~~----------l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~ 176 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQEAP----------LSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLD 176 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHhcCC----------CCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEc
Confidence 1 111224699999997 69999886532 2222 3678999999999 99999999999999999
Q ss_pred CCccEEEeecccccc
Q 012014 293 DEMIGHVGDFGMARF 307 (473)
Q Consensus 293 ~~~~~kl~Dfg~~~~ 307 (473)
.++.++|+|||.+..
T Consensus 177 ~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 177 PDGKFWLIDFDRGEL 191 (239)
T ss_pred CCCCEEEEECCCccc
Confidence 889999999998874
No 434
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=4.3e-17 Score=156.76 Aligned_cols=98 Identities=32% Similarity=0.481 Sum_probs=80.9
Q ss_pred CCccccccceeehhhhHHHHHhCCCCCCCCC-CCcccHHHHHHHhcCC-ccccccccccc-cchHHHHHHHhhhcccCcc
Q 012014 1 MGYVSSYGDVYSFGILLLEMFTGLRPNDDMF-NDELNLHNFVKSALPE-RAEEILDVVFF-QEIEEEETMYKKASSTCTQ 77 (473)
Q Consensus 1 ~g~~t~ksDVySfGVvllEl~tg~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~ 77 (473)
+|++|+||||||||||||||+|||+|.|... .++.+++.|++..+.+ .+.+++|+.+. ......
T Consensus 252 ~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~------------- 318 (361)
T KOG1187|consen 252 TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDE------------- 318 (361)
T ss_pred cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChH-------------
Confidence 4889999999999999999999999988544 4556799999988877 67899999975 332211
Q ss_pred hhhHHHHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 78 SSIILECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
+++..++.+|+.|++..+..||+|.+|...|+.+
T Consensus 319 -----~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 319 -----KEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred -----HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 2366788899999999999999999998888544
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=1.3e-15 Score=129.10 Aligned_cols=135 Identities=21% Similarity=0.201 Sum_probs=108.5
Q ss_pred ccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCC--CCceeeeeeeeccccCCceeeEEEEE
Q 012014 149 SANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKH--RNIVRVFTAFSGVDYQGARFKAVVYK 226 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 226 (473)
+.+.||+|.++.||++... +..+++|....... ...+.+|+.++..++| .++++++.++... ...+++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD-----GWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEEEEE
Confidence 4567999999999999964 47899999764332 4578999999999976 5888888776432 35799999
Q ss_pred ecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccc
Q 012014 227 FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 227 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
|++++++..+ +......++.+++.+|.+||.....+++|+|++|+||+++..+.++++|||.+.
T Consensus 74 ~~~g~~~~~~----------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 74 WIEGETLDEV----------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred ecCCeecccC----------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 9988877654 144566788999999999993322579999999999999998999999999886
Q ss_pred c
Q 012014 307 F 307 (473)
Q Consensus 307 ~ 307 (473)
.
T Consensus 138 ~ 138 (155)
T cd05120 138 Y 138 (155)
T ss_pred C
Confidence 4
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=2.6e-15 Score=134.74 Aligned_cols=161 Identities=20% Similarity=0.353 Sum_probs=122.6
Q ss_pred HHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHh
Q 012014 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272 (473)
Q Consensus 193 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH 272 (473)
.-+..+.|.|||+++.++.+..+.+.....++.|||.-|+|.++|++.... ...+....-.+|+.||+.||.|||
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-----~~a~~~~~wkkw~tqIlsal~yLh 193 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-----QKALFQKAWKKWCTQILSALSYLH 193 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-----hhhhhHHHHHHHHHHHHhhhhhhh
Confidence 345566899999999999888777777889999999999999999875432 123556666789999999999999
Q ss_pred hCCCCCeeeccCCCCcEEecCCccEEEeecccccccCc--cccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHH
Q 012014 273 CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA--IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILL 350 (473)
Q Consensus 273 ~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 350 (473)
+. +..|+|+++..+-|++..+|-+|++--.-...... ...........|-++|.|||.-.....+.++|||+||...
T Consensus 194 s~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 194 SC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred cc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 55 88999999999999999999888753211111100 0011112234467899999997777788899999999999
Q ss_pred HHHHhCCCC
Q 012014 351 LEMFTGIRP 359 (473)
Q Consensus 351 ~elltg~~P 359 (473)
.+|..+..-
T Consensus 273 lemailEiq 281 (458)
T KOG1266|consen 273 LEMAILEIQ 281 (458)
T ss_pred HHHHHheec
Confidence 999887543
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.57 E-value=5e-15 Score=146.36 Aligned_cols=143 Identities=18% Similarity=0.209 Sum_probs=98.8
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--------------------------c--------------hhHH
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--------------------------S--------------KSFK 189 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~~~~ 189 (473)
.+.||+|++|.||+|++.+|+.||||+.+..-... . -.|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999899999999986321000 0 0244
Q ss_pred HHHHHHHhc----CCCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHH
Q 012014 190 SECKAAINI----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265 (473)
Q Consensus 190 ~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 265 (473)
+|+..+.++ +|.+-+.+-.++.+. ....+|||||++|++|.++....... . ....++.+++
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~--------~---~~~~ia~~~~ 266 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR----TSERVLTMEWIDGIPLSDIAALDEAG--------L---DRKALAENLA 266 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh----cCCceEEEEeECCcccccHHHHHhcC--------C---CHHHHHHHHH
Confidence 555555554 233333333333221 12358999999999998876432110 0 1234566665
Q ss_pred H-HHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCc
Q 012014 266 C-ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310 (473)
Q Consensus 266 ~-~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 310 (473)
. .+..+| ..|++|+|++|.||+++.++.++++|||++..++.
T Consensus 267 ~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 267 RSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 5 477889 89999999999999999999999999999987643
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=2.2e-14 Score=139.70 Aligned_cols=199 Identities=24% Similarity=0.249 Sum_probs=151.9
Q ss_pred CCCccceeec--CCCeEEEEEEe---cCCCEEEEEEeeccC--CCCchhHHHHHHHHHhc-CCCCceeeeeeeeccccCC
Q 012014 146 GFSSANLIGA--GNFGSVYNGTL---FDGTTIAVKVFNLIR--PGGSKSFKSECKAAINI-KHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 146 ~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 217 (473)
.|.+.+.+|. |.+|.||.+.. .++..+|+|.-+... +.....=.+|+.....+ .|+|.++.+..+ .+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~-----e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW-----EG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----cc
Confidence 4566788999 99999999874 457889999854322 22333445666666666 499999976665 34
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHH----HHHHHhhCCCCCeeeccCCCCcEEecC
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC----ALRYLHCDCQPPIAHCNLKPSNVLLDD 293 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----~L~~LH~~~~~~iiH~Dlkp~Nil~~~ 293 (473)
....++-+|+| +.+|..+...... .++....+.+..+... ||.++| ..+++|-|+||+||+...
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~--------~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCN--------FLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTS 257 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccc--------cCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheeccc
Confidence 55778999998 5788888776543 2445666677777777 999999 999999999999999999
Q ss_pred C-ccEEEeecccccccCccccccc---eeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 294 E-MIGHVGDFGMARFLPAIDKQNR---FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 294 ~-~~~kl~Dfg~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
+ ...+++|||+...+........ .....|...|++||...+ .++..+||||+|.++.+..++..++..
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccC
Confidence 8 8899999999988766542221 122357888999999766 688899999999999999998777643
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.45 E-value=2.4e-13 Score=135.87 Aligned_cols=147 Identities=15% Similarity=0.149 Sum_probs=94.1
Q ss_pred cCCCCccceeecCCCeEEEEEEecC-CCEEEEEEeeccCC----------------------C----C--------ch--
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRP----------------------G----G--------SK-- 186 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~----------------------~----~--------~~-- 186 (473)
...|+. +.||+|++|.||+|++.+ |+.||||+.+..-. . . .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999776 99999999863210 0 0 01
Q ss_pred ----hHHHHHHHHHhc----CCCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHh--cCCCCCCCCCcchhhcHHH
Q 012014 187 ----SFKSECKAAINI----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWL--RGKDDTNWRPLNFNFLIKK 256 (473)
Q Consensus 187 ----~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~~~ 256 (473)
.+.+|+..+.++ .+.+.+.+-.++.+. ....+|||||+.|+.+.++- ...+.. ...+....
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~d-----~~~la~~~ 268 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGTD-----MKLLAERG 268 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCCC-----HHHHHHHH
Confidence 134455444444 233334433333221 22458999999999998752 222100 00122222
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc----cEEEeecccccccCc
Q 012014 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM----IGHVGDFGMARFLPA 310 (473)
Q Consensus 257 ~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~----~~kl~Dfg~~~~~~~ 310 (473)
+..++.| ++ ..|++|+|+||.||+++.++ .++++|||++..++.
T Consensus 269 v~~~~~Q-------if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 269 VEVFFTQ-------VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH-------HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2333333 34 67999999999999999888 999999999987754
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.41 E-value=1.2e-12 Score=113.26 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=93.9
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCc-eeeeeeeeccccCCceeeEEEEEec
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNI-VRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
.+.|+.|.++.||++.. .+..+++|....... ....+.+|+.++..+.+.++ .+++.+..+ ..++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~-------~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPE-------TGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCC-------CCeEEEEec
Confidence 35689999999999985 478899998754321 23456889999999865554 445544211 237999999
Q ss_pred CCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCC-----eeeccCCCCcEEecCCccEEEeecc
Q 012014 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPP-----IAHCNLKPSNVLLDDEMIGHVGDFG 303 (473)
Q Consensus 229 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----iiH~Dlkp~Nil~~~~~~~kl~Dfg 303 (473)
+|.++.+. .. ....++.+++.+|..|| ..+ ++|+|++|.||+++ ++.++++|||
T Consensus 74 ~G~~l~~~----~~-------------~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~ 132 (170)
T cd05151 74 EGSELLTE----DF-------------SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE 132 (170)
T ss_pred CCCccccc----cc-------------cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence 99887543 00 01235678999999999 666 59999999999999 6679999999
Q ss_pred ccc
Q 012014 304 MAR 306 (473)
Q Consensus 304 ~~~ 306 (473)
.+.
T Consensus 133 ~a~ 135 (170)
T cd05151 133 YAG 135 (170)
T ss_pred ccc
Confidence 876
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.38 E-value=8.8e-12 Score=108.36 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=96.4
Q ss_pred ceeecCCCeEEEEEEecC-------CCEEEEEEeeccCC----------------------CCchhH----HHHHHHHHh
Q 012014 151 NLIGAGNFGSVYNGTLFD-------GTTIAVKVFNLIRP----------------------GGSKSF----KSECKAAIN 197 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~----~~E~~~l~~ 197 (473)
..||.|.=+.||.|...+ +..+|||+++.... +....+ .+|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998442 47999999863110 001123 389999999
Q ss_pred cC--CCCceeeeeeeeccccCCceeeEEEEEecCCCCHHH-HhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHH-hh
Q 012014 198 IK--HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEE-WLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL-HC 273 (473)
Q Consensus 198 l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~L-H~ 273 (473)
+. .-++.+.+++. ..+|||||+.++.+.. .++.. .++..+...+..+++.+|..| |
T Consensus 83 l~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~Lkd~----------~~~~~~~~~i~~~i~~~l~~l~H- 142 (197)
T cd05146 83 MQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPKLKDA----------KLNDEEMKNAYYQVLSMMKQLYK- 142 (197)
T ss_pred HHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchhhhcc----------ccCHHHHHHHHHHHHHHHHHHHH-
Confidence 84 35666766542 2389999996643321 22211 122455667889999999998 8
Q ss_pred CCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 274 DCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 274 ~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
..|+||+||++.||+++ ++.+.|+|||.+...
T Consensus 143 --~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 143 --ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred --hCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 88999999999999997 467999999988754
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.35 E-value=1.8e-11 Score=120.69 Aligned_cols=167 Identities=17% Similarity=0.174 Sum_probs=123.9
Q ss_pred ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCC
Q 012014 166 LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245 (473)
Q Consensus 166 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~ 245 (473)
..++.+|.|...+...........+-++.|+.++||||++++..+.. ....|||+|-+ -.|..+++...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-----~~~~ylvTErV--~Pl~~~lk~l~---- 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-----EGTLYLVTERV--RPLETVLKELG---- 102 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-----cCceEEEeecc--ccHHHHHHHhH----
Confidence 56788899988876554444567788899999999999999998644 34789999988 36777776543
Q ss_pred CCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCccccccceeeccCCCC
Q 012014 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325 (473)
Q Consensus 246 ~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~ 325 (473)
.....-.+.||+.||.|||. +.+++|++|.-+.|+++..|..||++|-++............. .---.
T Consensus 103 --------~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~--~~~~s 170 (690)
T KOG1243|consen 103 --------KEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSL--YLIES 170 (690)
T ss_pred --------HHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccc--hhhhc
Confidence 34455578899999999985 6799999999999999999999999998876543322111111 11223
Q ss_pred cCCCccccCCCCCcccchhhHhHHHHHHHhCC
Q 012014 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGI 357 (473)
Q Consensus 326 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 357 (473)
|..|+.+.... -..|.|-||++++|++.|.
T Consensus 171 ~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 171 FDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 56666543322 3459999999999999993
No 443
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.28 E-value=6.9e-13 Score=136.09 Aligned_cols=207 Identities=24% Similarity=0.343 Sum_probs=147.9
Q ss_pred cccCCCCccceeecCCCeEEEEEE-ecCCCEEEEEEeec---cCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQG 217 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 217 (473)
...+.|.+.+-+-+|.++.++.+. ...|...+.|+... ......+....+-.++....||.++.....+ ..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CC
Confidence 455778888889999999999887 33454445554432 2222334444455555555667777655442 22
Q ss_pred ceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccE
Q 012014 218 ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297 (473)
Q Consensus 218 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~ 297 (473)
....+|+++|..+++|...|+...... .+-+...+..+..+++||| ...+.|+|++|.|+++..+++.
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~s---------aepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLS---------AEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCcc---------cccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCc
Confidence 345689999999999999988776322 2233345667788999999 7779999999999999999999
Q ss_pred EEeecccccccCccc-----------------------------cccceeeccCCCCcCCCccccCCCCCcccchhhHhH
Q 012014 298 HVGDFGMARFLPAID-----------------------------KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGI 348 (473)
Q Consensus 298 kl~Dfg~~~~~~~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 348 (473)
+++|||.....+-.. .........||+.|.+||...+......+|+|++|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 999998433221100 001123456899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCC
Q 012014 349 LLLEMFTGIRPSDGIFT 365 (473)
Q Consensus 349 il~elltg~~P~~~~~~ 365 (473)
+++|.++|.+||.....
T Consensus 1024 ~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred hhhhhhcCCCCCCCcch
Confidence 99999999999986443
No 444
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.26 E-value=2.7e-10 Score=106.44 Aligned_cols=280 Identities=12% Similarity=0.125 Sum_probs=165.8
Q ss_pred ccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhc-CCCCceeeeeeeecc--ccCCceeeEEEE
Q 012014 149 SANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIVRVFTAFSGV--DYQGARFKAVVY 225 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~~~~~~lv~ 225 (473)
....||+|+-+.+|..- .-...+-|++........... +..|... .||-+-.-+.+-... ........-++|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 46679999999999653 112235577765443322222 2222222 455443311110000 011222356777
Q ss_pred EecCCC-CHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccc
Q 012014 226 KFMPNG-SLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304 (473)
Q Consensus 226 e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~ 304 (473)
..+++. .+..++..... +..-..+.|.-.++.++.++.+.+-|| ..|.+-+|+.++|+|+++++.+.|.|-..
T Consensus 90 P~v~g~~pI~~~y~p~tR---Rqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 90 PKVSGKEPIHMIYSPATR---RQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred ccCCCccchhhhcCchhh---cccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccc
Confidence 777654 23333322211 111113557788999999999999999 99999999999999999999999998543
Q ss_pred ccccCccccccceeeccCCCCcCCCcccc-----CCCCCcccchhhHhHHHHHHHhC-CCCCCCCCCCcccHHHHHHhhc
Q 012014 305 ARFLPAIDKQNRFICIKGSTGYIPPEYDL-----GCEASTYGDVYSFGILLLEMFTG-IRPSDGIFTGKMNLRNFVKMAL 378 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg-~~P~~~~~~~~~~~~~~~~~~~ 378 (473)
-... .......+..|.+.|.+||.-. +...+...|.|.||+++++++.| ++||.|+..... -
T Consensus 164 fqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~---------a 231 (637)
T COG4248 164 FQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD---------A 231 (637)
T ss_pred eeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC---------C
Confidence 3221 2344556677999999999744 44557778999999999999986 999998643211 0
Q ss_pred Ccchh-hhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhccc--CCCCCCCChHHHHHHHHHHHHh
Q 012014 379 PQRAE-EVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSA--ERPRERMKINDVESRLRLIRRK 455 (473)
Q Consensus 379 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~--~dP~~RPt~~ev~~~L~~l~~~ 455 (473)
|+..+ .+..-... ...+ ++ .+.......++. .-.+..+..|..+|+. .++.-|||++-.+..|..++..
T Consensus 232 p~p~E~~Ia~g~f~-ya~~-~~-----~g~~p~P~~~P~-~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 232 PNPLETDIAHGRFA-YASD-QR-----RGLKPPPRSIPL-SMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred CCcchhhhhcceee-echh-cc-----CCCCCCCCCCCh-hhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 11111 00000000 0000 00 000000000000 1245677778888886 3467999999999999999988
Q ss_pred hccC
Q 012014 456 LLET 459 (473)
Q Consensus 456 ~~~~ 459 (473)
++..
T Consensus 304 L~~C 307 (637)
T COG4248 304 LKKC 307 (637)
T ss_pred hhhh
Confidence 7665
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=4.7e-12 Score=123.63 Aligned_cols=250 Identities=17% Similarity=0.142 Sum_probs=168.5
Q ss_pred cccCCCCccceeecCCCeEEEEEEe--cCCCEEEEEEeeccCCCCchh--HHHHHHHHHhc-CCCCceeeeeeeeccccC
Q 012014 142 NATNGFSSANLIGAGNFGSVYNGTL--FDGTTIAVKVFNLIRPGGSKS--FKSECKAAINI-KHRNIVRVFTAFSGVDYQ 216 (473)
Q Consensus 142 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 216 (473)
....+|..+..||.|.|+.|+.... .++..|++|.+.......... -..|+.+...+ .|.+++..+..+...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~--- 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL--- 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---
Confidence 3456788999999999999998873 467889999876443332222 23455555555 588888877665432
Q ss_pred CceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCC-c
Q 012014 217 GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE-M 295 (473)
Q Consensus 217 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~-~ 295 (473)
...++-.|||.++++...+.... .+.....+++..|++.++.++| ++.++|+|+||+||++..+ +
T Consensus 339 --r~~~ip~e~~~~~s~~l~~~~~~---------~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 339 --RQGYIPLEFCEGGSSSLRSVTSQ---------MLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGF 404 (524)
T ss_pred --ccccCchhhhcCcchhhhhHHHH---------hcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchh
Confidence 24468899999999877663222 2446677889999999999999 9999999999999999876 7
Q ss_pred cEEEeecccccccCccccccceeeccCCCCc-CCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 012014 296 IGHVGDFGMARFLPAIDKQNRFICIKGSTGY-IPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGKMNLRNFV 374 (473)
Q Consensus 296 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~~~~~~~~ 374 (473)
..+++|||+++.+.-... ....++..| .+|.......+..+.|++|||..+.+.+++..--... .. +
T Consensus 405 ~~~~~~~~~~t~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~------~- 472 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQ------S- 472 (524)
T ss_pred hhhccccccccccceecc----cccccccccccchhhccccccccccccccccccccccccCcccCccc-cc------c-
Confidence 889999999864321110 111123334 3566666777899999999999999999975432110 00 0
Q ss_pred HhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcchhhHHHHHHHHHHHHhhhcccCCCCCCCChHHHHHHHHHH
Q 012014 375 KMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAHASIILECFNSICEIGVACSAERPRERMKINDVESRLRLI 452 (473)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~l 452 (473)
..+... ...........+..+...+...++..||.+.++....+-.
T Consensus 473 --------~~i~~~------------------------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 473 --------LTIRSG------------------------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred --------eeeecc------------------------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 000000 0000011124556788888999999999998876554443
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.2e-10 Score=97.71 Aligned_cols=129 Identities=21% Similarity=0.265 Sum_probs=93.5
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC--------chhHHHHHHHHHhcCC--CCceeeeeeeeccccCCcee
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--------SKSFKSECKAAINIKH--RNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~ 220 (473)
..+++|+-+.+|.+.+. |.++++|.=....... .++..+|++++.++.- -+.+.++++... .
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-------~ 73 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-------N 73 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-------C
Confidence 35789999999999753 4456666432222111 1346789999988853 344455554321 3
Q ss_pred eEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEe
Q 012014 221 KAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG 300 (473)
Q Consensus 221 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~ 300 (473)
..|+|||++|-.|.+++.... ..++..+-.-+.-|| ..||+|+||.++||++..+. +.++
T Consensus 74 ~~I~me~I~G~~lkd~l~~~~----------------~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~I 133 (204)
T COG3642 74 GLIVMEYIEGELLKDALEEAR----------------PDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFI 133 (204)
T ss_pred CEEEEEEeCChhHHHHHHhcc----------------hHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEE
Confidence 479999999999998887651 236677777788899 99999999999999998665 8999
Q ss_pred ecccccc
Q 012014 301 DFGMARF 307 (473)
Q Consensus 301 Dfg~~~~ 307 (473)
|||++..
T Consensus 134 DfGLg~~ 140 (204)
T COG3642 134 DFGLGEF 140 (204)
T ss_pred ECCcccc
Confidence 9999874
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.21 E-value=1.6e-10 Score=104.63 Aligned_cols=145 Identities=15% Similarity=0.129 Sum_probs=105.1
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCC-CCchhHHHHHHHHHhcCC--CCceeeeeeeeccccCCceeeEEEEEe
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP-GGSKSFKSECKAAINIKH--RNIVRVFTAFSGVDYQGARFKAVVYKF 227 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e~ 227 (473)
+.|+.|.++.||++...+|+.+++|....... .....+.+|++++..+.+ .++.+++.+..... .....++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEEE
Confidence 56899999999999876668999998764322 235678999999999975 44577776653321 11245899999
Q ss_pred cCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhC---------------------------------
Q 012014 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCD--------------------------------- 274 (473)
Q Consensus 228 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~--------------------------------- 274 (473)
++|.++.+.+... .++..+...++.+++.+|..||+.
T Consensus 82 i~G~~l~~~~~~~----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (223)
T cd05154 82 VDGRVLRDRLLRP----------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRT 151 (223)
T ss_pred eCCEecCCCCCCC----------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcc
Confidence 9998887655311 133556667777777777777732
Q ss_pred --------------------CCCCeeeccCCCCcEEecC--CccEEEeecccccc
Q 012014 275 --------------------CQPPIAHCNLKPSNVLLDD--EMIGHVGDFGMARF 307 (473)
Q Consensus 275 --------------------~~~~iiH~Dlkp~Nil~~~--~~~~kl~Dfg~~~~ 307 (473)
....++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 152 DEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0246799999999999998 66789999998764
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.17 E-value=3e-10 Score=98.44 Aligned_cols=125 Identities=20% Similarity=0.226 Sum_probs=81.0
Q ss_pred EEEEEEecCCCEEEEEEeeccCCCC--------------------------chhHHHHHHHHHhcCCC--Cceeeeeeee
Q 012014 160 SVYNGTLFDGTTIAVKVFNLIRPGG--------------------------SKSFKSECKAAINIKHR--NIVRVFTAFS 211 (473)
Q Consensus 160 ~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~--niv~~~~~~~ 211 (473)
.||.|...+|..+|+|+.+...... .....+|.+.|.++..- ++.+.+.+-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999986321100 02357899999999755 567776552
Q ss_pred ccccCCceeeEEEEEecC--CCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHH-HhhCCCCCeeeccCCCCc
Q 012014 212 GVDYQGARFKAVVYKFMP--NGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY-LHCDCQPPIAHCNLKPSN 288 (473)
Q Consensus 212 ~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~-LH~~~~~~iiH~Dlkp~N 288 (473)
..+|||||++ |..+..+.... ++......++.+++..+.. +| ..||+|+||.+.|
T Consensus 80 --------~~~ivME~I~~~G~~~~~l~~~~-----------~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~N 137 (188)
T PF01163_consen 80 --------RNVIVMEYIGEDGVPLPRLKDVD-----------LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYN 137 (188)
T ss_dssp --------TTEEEEE--EETTEEGGCHHHCG-----------GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTS
T ss_pred --------CCEEEEEecCCCccchhhHHhcc-----------ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhh
Confidence 2379999998 54444333221 1123345577777775554 68 8999999999999
Q ss_pred EEecCCccEEEeeccccccc
Q 012014 289 VLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 289 il~~~~~~~kl~Dfg~~~~~ 308 (473)
|+++++ .+.|+|||.+...
T Consensus 138 Ilv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 138 ILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EEEETT-CEEE--GTTEEET
T ss_pred EEeecc-eEEEEecCcceec
Confidence 999887 8999999988654
No 449
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=6.2e-10 Score=92.91 Aligned_cols=143 Identities=20% Similarity=0.210 Sum_probs=98.6
Q ss_pred ccceeecCCCeEEEEEEecCCCEEEEEEeeccCC--C------CchhHHHHHHHHHhcCCCCceeeeeeeeccccCCcee
Q 012014 149 SANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--G------GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARF 220 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 220 (473)
...+|-+|+-+.|+++.+ .|+.+.||.--.... . ...+..+|++++.++.--.|.--.-+|.+.. .
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~-----~ 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY-----G 84 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----C
Confidence 567889999999999984 677777774321111 1 2345788999999885333322222232221 2
Q ss_pred eEEEEEecCC-CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc---c
Q 012014 221 KAVVYKFMPN-GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM---I 296 (473)
Q Consensus 221 ~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~---~ 296 (473)
-.|+|||++| .++.+++........ .......++.+|-+.+.-|| .++|||+||..+||++..++ .
T Consensus 85 ~~i~ME~~~g~~~vk~~i~~~~~~~~-------~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDFILSTMEDES-------EDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred CeEEEEeccchhHHHHHHHHHccCcc-------cchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCc
Confidence 3799999966 478888876543321 12223678888999999999 99999999999999996554 4
Q ss_pred EEEeecccccc
Q 012014 297 GHVGDFGMARF 307 (473)
Q Consensus 297 ~kl~Dfg~~~~ 307 (473)
+.++|||++..
T Consensus 155 ~~lIdfgls~~ 165 (229)
T KOG3087|consen 155 PILIDFGLSSV 165 (229)
T ss_pred eEEEeecchhc
Confidence 58999999863
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.03 E-value=6e-09 Score=95.95 Aligned_cols=145 Identities=14% Similarity=0.009 Sum_probs=96.9
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCC-----------CCchhHHHHHHHHHhcCCCC--ceeeeeeeeccccCC
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP-----------GGSKSFKSECKAAINIKHRN--IVRVFTAFSGVDYQG 217 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~ 217 (473)
+.+-......|++..+ +|+.+.||....... .....+.+|...+.++..-+ .+..+++........
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444445667654 678899997742210 11124778998888874322 223333332211111
Q ss_pred ceeeEEEEEecCCC-CHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC---
Q 012014 218 ARFKAVVYKFMPNG-SLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD--- 293 (473)
Q Consensus 218 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~--- 293 (473)
....++|||++++. +|.+++...... .........++.+++..+.-|| ..||+|+|+++.|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~-------~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~ 176 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATN-------PPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFP 176 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhccc-------CCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEecccc
Confidence 23468999999876 899998532111 1224567789999999999999 999999999999999975
Q ss_pred ----CccEEEeeccccc
Q 012014 294 ----EMIGHVGDFGMAR 306 (473)
Q Consensus 294 ----~~~~kl~Dfg~~~ 306 (473)
++.+.|+||+.+.
T Consensus 177 ~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 177 GREEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCCCCceEEEEECCccc
Confidence 4688999999875
No 451
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.02 E-value=2.6e-10 Score=125.95 Aligned_cols=100 Identities=20% Similarity=0.397 Sum_probs=73.4
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCC-ccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPE-RAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+.+|.|+|||||||+++||+||+.|.+........+..|++..... .....+|+.+.......
T Consensus 853 ~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 916 (968)
T PLN00113 853 KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN---------------- 916 (968)
T ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCcc----------------
Confidence 4578999999999999999999999875555556788898776554 33445565543221111
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHHh
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIKK 118 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~ 118 (473)
.+++..+..++..|+..+|.+||+|.++.+.++.+.+
T Consensus 917 -~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 917 -QNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred -HHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 1224456677889999999999999999999987654
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.01 E-value=6.8e-09 Score=99.75 Aligned_cols=180 Identities=19% Similarity=0.202 Sum_probs=132.5
Q ss_pred CCeEEEEEE-ecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCceeeeeeeeccccCCceeeEEEEEecCC-CCHH
Q 012014 157 NFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN-GSLE 234 (473)
Q Consensus 157 ~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~ 234 (473)
-..+.|++. ..+|..|++|+++..+.........-+++++++.|+|+|++..+|.... -+...+++|++|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCchHH
Confidence 445788988 6789999999995444333333445678899999999999999987443 334568999999985 6787
Q ss_pred HHhcCCCCCC------CCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 235 EWLRGKDDTN------WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 235 ~~l~~~~~~~------~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++........ ....+...++...+.++.|+..||.++| +.|+.-+-|.|.+|+++.+..++|+..|+...+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 7664443222 1122334668899999999999999999 889999999999999999989999988887655
Q ss_pred CccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCC
Q 012014 309 PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359 (473)
Q Consensus 309 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P 359 (473)
.... + +-+. --.+-|.=.||.+++.|.||..-
T Consensus 444 ~~d~---------~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDP---------T-------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCC---------C-------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 3322 0 0111 11245888999999999998543
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.96 E-value=4.6e-09 Score=93.59 Aligned_cols=136 Identities=20% Similarity=0.142 Sum_probs=98.1
Q ss_pred CCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCC----------------------CchhHHHHHHHHHhcCCC--
Q 012014 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG----------------------GSKSFKSECKAAINIKHR-- 201 (473)
Q Consensus 146 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~-- 201 (473)
=..++..||-|.-+.||.|....|.++|||.-+..... .....++|.++|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 35567899999999999999888999999976422110 112357899999999655
Q ss_pred CceeeeeeeeccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeee
Q 012014 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAH 281 (473)
Q Consensus 202 niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH 281 (473)
.+.+-+++ +...+||||++|-.|...-- ..+..-.++..|+.-+.-+- ..|+||
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r~--------------~~en~~~il~~il~~~~~~~---~~GiVH 225 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLRL--------------DVENPDEILDKILEEVRKAY---RRGIVH 225 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeecccC--------------cccCHHHHHHHHHHHHHHHH---HcCccc
Confidence 67766654 24589999998866654321 01222334555555555555 679999
Q ss_pred ccCCCCcEEecCCccEEEeecccccc
Q 012014 282 CNLKPSNVLLDDEMIGHVGDFGMARF 307 (473)
Q Consensus 282 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 307 (473)
+|+.+=||+++++|.+.++||-.+..
T Consensus 226 GDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 226 GDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCchheEEEecCCCEEEEeCccccc
Confidence 99999999999999999999976643
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=5e-08 Score=86.90 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=81.7
Q ss_pred chhHHHHHHHHHhcCC--CCceeeeeeeeccccCCceeeEEEEEecCCC-CHHHHhcCCCCCCCCCcchhhcHHHHHHHH
Q 012014 185 SKSFKSECKAAINIKH--RNIVRVFTAFSGVDYQGARFKAVVYKFMPNG-SLEEWLRGKDDTNWRPLNFNFLIKKKLDIA 261 (473)
Q Consensus 185 ~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 261 (473)
.....+|...+..|.. =.+++.+++....... ....++|+|++++. +|.+++..... .+......++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~-~~~s~lite~l~~~~~L~~~~~~~~~---------~~~~~~~~ll 124 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGG-GYRSYLITEALPGAQDLRDLLQQWEQ---------LDPSQRRELL 124 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC-ceeEEEEEEeCCCcccHHHHHHhhcc---------cchhhHHHHH
Confidence 4467888888877742 2344444444332211 24568999999874 89999876332 2245667899
Q ss_pred HHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCc---cEEEeecccccc
Q 012014 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEM---IGHVGDFGMARF 307 (473)
Q Consensus 262 ~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~---~~kl~Dfg~~~~ 307 (473)
.+++..+.-|| .+||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 125 ~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 125 RALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999 99999999999999998877 899999998764
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.3e-09 Score=108.25 Aligned_cols=150 Identities=16% Similarity=0.224 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCcccc-------ccceeeccCCCCcCCCccccC
Q 012014 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDK-------QNRFICIKGSTGYIPPEYDLG 334 (473)
Q Consensus 262 ~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~ 334 (473)
.+++.||.|+|. +.++||++|.|++|.++.++.+||+.|+++........ ........-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 345589999995 67999999999999999999999999998865433111 000111123567999999999
Q ss_pred CCCCcccchhhHhHHHHHHHhCCCC-CCCCCCCcccHHHHHHhhcCcchhhhccccchHHHHhhhhhhcccccCCCCcch
Q 012014 335 CEASTYGDVYSFGILLLEMFTGIRP-SDGIFTGKMNLRNFVKMALPQRAEEVVDDFNLQEIEEGRTMCMEVSSSSGSSAH 413 (473)
Q Consensus 335 ~~~~~~~DiwSlG~il~elltg~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
...+.++|+||+|+++|.+..|..+ +... .... ...+ ....+..- .
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~-~~~~---------~~~~~~~~----------------------~ 230 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLL-SYSF---------SRNLLNAG----------------------A 230 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc-CCcc-hhhh---------hhcccccc----------------------c
Confidence 8889999999999999999954444 3321 1110 0000 00000000 0
Q ss_pred hhHHHHHHHHHHHHhhhcccCCCCCCCChHHHH
Q 012014 414 ASIILECFNSICEIGVACSAERPRERMKINDVE 446 (473)
Q Consensus 414 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 446 (473)
.....+.+.++.+=+.+.+..++.-||++.++.
T Consensus 231 ~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 231 FGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred ccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 001134677888888899999999999777664
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.79 E-value=2.5e-07 Score=80.73 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=109.8
Q ss_pred hhhhhcccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeecc-----C-CCCchhHHHHHHHHHhcCC--CCceeeee
Q 012014 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLI-----R-PGGSKSFKSECKAAINIKH--RNIVRVFT 208 (473)
Q Consensus 137 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~E~~~l~~l~h--~niv~~~~ 208 (473)
|+.+......+...---|+||.+-|++... +|+.+-+|.-... . +.....|.+|...+.++.. -.+.+..
T Consensus 10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv- 87 (216)
T PRK09902 10 FNHWWATEGDWVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV- 87 (216)
T ss_pred HHHHHhCCCceecCCCcCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-
Confidence 444444444444444457899999999764 4557888876411 1 3456789999999999853 2244444
Q ss_pred eeeccccCCceeeEEEEEecCC-CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 012014 209 AFSGVDYQGARFKAVVYKFMPN-GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287 (473)
Q Consensus 209 ~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 287 (473)
++...........+||+|-+++ -||.+++...... ..+...+..++.+++..+.-|| +.|+.|+|+.+.
T Consensus 88 f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~-------~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~k 157 (216)
T PRK09902 88 FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVS-------PYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVR 157 (216)
T ss_pred eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcC-------CcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHh
Confidence 2221112233456899997753 6899988664322 1235667789999999999999 999999999999
Q ss_pred cEEecCCcc--EEEeeccccc
Q 012014 288 NVLLDDEMI--GHVGDFGMAR 306 (473)
Q Consensus 288 Nil~~~~~~--~kl~Dfg~~~ 306 (473)
||+++.++. ++++||--++
T Consensus 158 hIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 158 HIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred heeecCCCCeeEEEEEhhccc
Confidence 999986666 9999997654
No 457
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.73 E-value=1.5e-08 Score=97.35 Aligned_cols=87 Identities=26% Similarity=0.333 Sum_probs=55.6
Q ss_pred ccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhHH
Q 012014 3 YVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSIIL 82 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (473)
.+|+|+|||||||||+||+||+.|...... ..+...+.. ......+.+.
T Consensus 222 ~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~--~~~Rp~~p~~--------------------------- 270 (362)
T KOG0192|consen 222 PYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVV--GGLRPPIPKE--------------------------- 270 (362)
T ss_pred cCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHh--cCCCCCCCcc---------------------------
Confidence 589999999999999999999999764432 112222111 1111111110
Q ss_pred HHHHHhhcccccccccccccccchhhHHHHHHHHHhhcc
Q 012014 83 ECLISICRTGVACSAELPNERMKINDVESRLRLIKKKLL 121 (473)
Q Consensus 83 ~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~~~ 121 (473)
|-..+..+...|+..+|..||+..++...|+.+.....
T Consensus 271 -~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 271 -CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred -CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 01112222334999999999999999999998876544
No 458
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=6.6e-09 Score=105.39 Aligned_cols=86 Identities=24% Similarity=0.479 Sum_probs=57.7
Q ss_pred CCccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchh
Q 012014 1 MGYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSS 79 (473)
Q Consensus 1 ~g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (473)
+|++|++||||||||||+|++| |+.|.....++| ..+.++. .++....+
T Consensus 679 y~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--VIe~i~~---g~lL~~Pe------------------------- 728 (774)
T KOG1026|consen 679 YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--VIECIRA---GQLLSCPE------------------------- 728 (774)
T ss_pred cCcccchhhhhhhhhhhhhhhccccCcccccchHH--HHHHHHc---CCcccCCC-------------------------
Confidence 5899999999999999999996 667754333332 1111110 01111100
Q ss_pred hHHHHHHHhhcccccccccccccccchhhHHHHHHHHHhh
Q 012014 80 IILECLISICRTGVACSAELPNERMKINDVESRLRLIKKK 119 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~ 119 (473)
.|-.++-.+.+.|++..|.+||+.+++..+|+.....
T Consensus 729 ---~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 729 ---NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred ---CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 2334455567789999999999999999999876543
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.69 E-value=1.9e-07 Score=81.75 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=91.5
Q ss_pred ccCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchh---------HHHHHHHHHhcCC---CCceeeeeee
Q 012014 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---------FKSECKAAINIKH---RNIVRVFTAF 210 (473)
Q Consensus 143 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h---~niv~~~~~~ 210 (473)
..++|...+++-......|.+-. .+|+.+++|..+.......+. ..+.+..+.++.. .....++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIe-i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIE-IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEE-ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 35678888888887777777666 477999999876433221111 2334444444422 2222323232
Q ss_pred eccccCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEE
Q 012014 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290 (473)
Q Consensus 211 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil 290 (473)
.-....-....+++|||++|..|.++..-. . .++..+..++.-|| ..|+.|+|..|.|++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~-------------e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFl 167 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIEDID-------------E----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFL 167 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchhcC-------------H----HHHHHHHHHHHHHH---HcCCccCCCCcCcEE
Confidence 222222233457899999998887653211 1 24456778899999 999999999999999
Q ss_pred ecCCccEEEeeccccc
Q 012014 291 LDDEMIGHVGDFGMAR 306 (473)
Q Consensus 291 ~~~~~~~kl~Dfg~~~ 306 (473)
+++++ ++++||+..+
T Consensus 168 v~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 168 VSNNG-IRIIDTQGKR 182 (229)
T ss_pred EECCc-EEEEECcccc
Confidence 98655 8999998665
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.66 E-value=1.2e-07 Score=94.68 Aligned_cols=139 Identities=21% Similarity=0.251 Sum_probs=90.4
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccC----------------------CC----Cc--------h------hHHH
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR----------------------PG----GS--------K------SFKS 190 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~----~~--------~------~~~~ 190 (473)
.-|+.++-|.||+|++.+|+.||||+.+..- +. .. + .+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 5799999999999999999999999886311 00 00 0 1445
Q ss_pred HHHHHHhcC-----CCCceeeeeeeeccccCCceeeEEEEEecCCCCHHHHh--cCCCCCCCCCcchhhcHHHHHHHHHH
Q 012014 191 ECKAAINIK-----HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWL--RGKDDTNWRPLNFNFLIKKKLDIAID 263 (473)
Q Consensus 191 E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~~~~~~i~~~ 263 (473)
|+..+.+++ .|+ +++=.+|.+ -.....|+|||++|-.+.+.. +..+ +..+. ++..
T Consensus 211 EA~n~~~~~~nf~~~~~-v~VP~V~we----~t~~~VLtmE~i~Gi~i~d~~~l~~~g----------~d~k~---ia~~ 272 (517)
T COG0661 211 EAANAERFRENFKDDPD-VYVPKVYWE----YTTRRVLTMEWIDGIKISDIAALKSAG----------IDRKE---LAEL 272 (517)
T ss_pred HHHHHHHHHHHcCCCCC-eEeceeehh----ccCCcEEEEEeeCCEecccHHHHHhcC----------CCHHH---HHHH
Confidence 555555552 232 222222221 123458999999998888874 3322 11222 2222
Q ss_pred HHHH-HHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccccccCc
Q 012014 264 VACA-LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310 (473)
Q Consensus 264 i~~~-L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 310 (473)
++.+ +..+- ..|++|.|..|.||+++.+|.+.+.|||+...++.
T Consensus 273 ~~~~f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 273 LVRAFLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2222 22333 46999999999999999999999999999987654
No 461
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.63 E-value=2.5e-08 Score=96.16 Aligned_cols=84 Identities=25% Similarity=0.300 Sum_probs=51.9
Q ss_pred CCccccccceeehhhhHHHHHhC-CCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchh
Q 012014 1 MGYVSSYGDVYSFGILLLEMFTG-LRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSS 79 (473)
Q Consensus 1 ~g~~t~ksDVySfGVvllEl~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (473)
.|++|.|||||||||+|+||+|- +-|...+ +..+-+...-.. ..+..|.
T Consensus 378 ~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~~le~G--yRlp~P~----------------------- 427 (468)
T KOG0197|consen 378 YGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLELLERG--YRLPRPE----------------------- 427 (468)
T ss_pred hCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHHHHhcc--CcCCCCC-----------------------
Confidence 47899999999999999999984 4443322 222222221111 0111111
Q ss_pred hHHHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 80 IILECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
.|-..+-.+...|+...|++||+.......++.+.
T Consensus 428 ---~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 428 ---GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred ---CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 12223334556799999999999998877776654
No 462
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.62 E-value=3.2e-08 Score=86.02 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=52.8
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
+..+.|+|||||||+|+||+||+.|..........+..+.....+.... +........
T Consensus 79 ~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------------- 136 (176)
T smart00750 79 QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR---DRSNLESVS------------------- 136 (176)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc---ccccHHHHH-------------------
Confidence 3567899999999999999999999653221111222222221111000 000000000
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
. ...+..+...|+..+|..||++.++...+....
T Consensus 137 -~-~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 137 -A-ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred -h-hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0 012334455699999999999999988776554
No 463
>PHA02988 hypothetical protein; Provisional
Probab=98.55 E-value=7.3e-08 Score=90.73 Aligned_cols=84 Identities=21% Similarity=0.322 Sum_probs=52.3
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
+..|.|+|||||||+++||+||+.|...... ..+. ......+.. +.+....
T Consensus 197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~---~~i~~~~~~----~~~~~~~-------------------- 247 (283)
T PHA02988 197 SEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIY---DLIINKNNS----LKLPLDC-------------------- 247 (283)
T ss_pred ccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHH---HHHHhcCCC----CCCCCcC--------------------
Confidence 4678999999999999999999999764321 1111 111111100 0000000
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
-..+..+...|+..+|+.||++.++...|+..+
T Consensus 248 ---~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 248 ---PLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ---cHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 011222344699999999999999999988765
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.53 E-value=4.1e-08 Score=96.81 Aligned_cols=190 Identities=14% Similarity=0.078 Sum_probs=132.9
Q ss_pred cCCCCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCC-ceeeeeeeeccccCCceeeE
Q 012014 144 TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRN-IVRVFTAFSGVDYQGARFKA 222 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~~ 222 (473)
+.-+...+-+++|+++.+++.+-...+....+.+.. .....-++++|.+++||| .+..++- ++...+.+
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d-----~~~E~~~~ 310 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLED-----YDGEDYLW 310 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCccccccc-----CCcccccc
Confidence 344455566889999999998732223333555432 245566889999999999 4444333 34556789
Q ss_pred EEEEecCCC-CHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEee
Q 012014 223 VVYKFMPNG-SLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301 (473)
Q Consensus 223 lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~D 301 (473)
+.++++.++ +-.... ......+..-+...+.+.-+++|+++| +..=+|+| ||+..+ +..|..|
T Consensus 311 i~~~i~s~~rs~~~~~--------~~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~ 374 (829)
T KOG0576|consen 311 IPMRICSTGRSSALEM--------TVSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLD 374 (829)
T ss_pred hhhhhhcCCccccccC--------ChhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-ccccccc
Confidence 999999776 211111 111223334455567777888999999 55568888 877665 6679999
Q ss_pred cccccccCccccccceeeccCCCCcCCCccccCCCCCcccchhhHhHHHHHHHhCCCCCCC
Q 012014 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362 (473)
Q Consensus 302 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 362 (473)
|+....+.... ......+|+.|+|||+.....+....|.||+|+-..++.-|.+|-..
T Consensus 375 ~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 375 FAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred ccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 99987765533 34456689999999999999999999999999888888888877654
No 465
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.49 E-value=1.5e-06 Score=76.98 Aligned_cols=135 Identities=17% Similarity=0.168 Sum_probs=92.3
Q ss_pred eeecCCCeEEEEEEecCCCEEEEEEeeccCCCC-------------------ch-----hHHHHHHHHHhcC--CCCcee
Q 012014 152 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG-------------------SK-----SFKSECKAAINIK--HRNIVR 205 (473)
Q Consensus 152 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------------------~~-----~~~~E~~~l~~l~--h~niv~ 205 (473)
.|+.|.-+.||+|...++..+|+|+++...... .. ...+|..-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 466777889999987789999999997422111 11 1346777777773 445555
Q ss_pred eeeeeeccccCCceeeEEEEEecCCCC-HHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 012014 206 VFTAFSGVDYQGARFKAVVYKFMPNGS-LEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNL 284 (473)
Q Consensus 206 ~~~~~~~~~~~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 284 (473)
-+++. .-.|||||+.... -.-.|+. ..+...++..+..++++.+.-|-. ..++||+||
T Consensus 135 Pi~~~---------~nVLvMEfIg~~g~pAP~LkD----------v~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDL 193 (268)
T COG1718 135 PIAFR---------NNVLVMEFIGDDGLPAPRLKD----------VPLELEEAEGLYEDVVEYMRRLYK--EAGLVHGDL 193 (268)
T ss_pred ceeec---------CCeEEEEeccCCCCCCCCccc----------CCcCchhHHHHHHHHHHHHHHHHH--hcCcccccc
Confidence 55553 2379999995431 1111111 122233567778888888888872 389999999
Q ss_pred CCCcEEecCCccEEEeeccccccc
Q 012014 285 KPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 285 kp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
..=|||+. ++.+.++|||.|...
T Consensus 194 SEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 194 SEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred hhhheEEE-CCeEEEEECcccccc
Confidence 99999999 788999999988754
No 466
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.48 E-value=2.9e-06 Score=76.58 Aligned_cols=143 Identities=14% Similarity=0.142 Sum_probs=80.2
Q ss_pred ceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCC--ceeeeeeeeccccCCceeeEEEEEec
Q 012014 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRN--IVRVFTAFSGVDYQGARFKAVVYKFM 228 (473)
Q Consensus 151 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~ 228 (473)
..||+|..+.||+. .+..+++|..... .......+|.+++..+..-. +.+.+++... .....+|||++
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~-----~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVED-----GGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEec-----CCeeeeeeeec
Confidence 56899999999984 2556788887532 23456789999998885433 3555555432 22357899999
Q ss_pred CCCC-HHHHhcCC------------------CCCCCCCcchhhc--HHHHHHHHH-------HHHH-HHHHHhh-CCCCC
Q 012014 229 PNGS-LEEWLRGK------------------DDTNWRPLNFNFL--IKKKLDIAI-------DVAC-ALRYLHC-DCQPP 278 (473)
Q Consensus 229 ~~g~-L~~~l~~~------------------~~~~~~~~~~~~~--~~~~~~i~~-------~i~~-~L~~LH~-~~~~~ 278 (473)
+|.+ +...+... ........ .+. .......+. .+.. ...+|.. .....
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~--~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTS--TFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCC--cHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 8863 22111110 00000000 000 000000000 0111 1122221 11346
Q ss_pred eeeccCCCCcEEecCCccEEEeeccccc
Q 012014 279 IAHCNLKPSNVLLDDEMIGHVGDFGMAR 306 (473)
Q Consensus 279 iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 306 (473)
++|+|+.|.||++++++ +.++||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999888 8999999875
No 467
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.46 E-value=4.9e-08 Score=90.67 Aligned_cols=78 Identities=26% Similarity=0.361 Sum_probs=44.7
Q ss_pred ccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 3 YVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
..|.|||||||||+++||+| |+.|.... ...++.............+ ..
T Consensus 181 ~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~-----~~-------------------- 230 (259)
T PF07714_consen 181 EYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQRLPIPD-----NC-------------------- 230 (259)
T ss_dssp EESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEETTSBT-----TS--------------------
T ss_pred ccccccccccccccccccccccccccccc-----ccccccccccccccceecc-----ch--------------------
Confidence 36889999999999999999 66675432 1122222221111111000 00
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRL 113 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l 113 (473)
-..+..+...|+..+|++||++.++.+.|
T Consensus 231 ---~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 ---PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11122345679999999999999998765
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.45 E-value=8.3e-07 Score=88.39 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=89.2
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCC-----------------------c--------h------hHHHHH
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG-----------------------S--------K------SFKSEC 192 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~--------~------~~~~E~ 192 (473)
.+.||.-+.|.||+|++.+|+.||||+-+..-... . + .|.+|+
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 35699999999999999999999999875321100 0 0 144555
Q ss_pred HHHHhc----CCCC------ceeeeeeeeccccCCceeeEEEEEecCCCCHHHH--hcCCCCCCCCCcchhhcHHHHHHH
Q 012014 193 KAAINI----KHRN------IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW--LRGKDDTNWRPLNFNFLIKKKLDI 260 (473)
Q Consensus 193 ~~l~~l----~h~n------iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--l~~~~~~~~~~~~~~~~~~~~~~i 260 (473)
+-..+. .|-+ |.++|-.+ .....|+||||+|..+.+. |.+.+ ++...+..-
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~-------st~RVLtME~~~G~~i~Dl~~i~~~g----------i~~~~i~~~ 308 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL-------STKRVLTMEYVDGIKINDLDAIDKRG----------ISPHDILNK 308 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc-------CcceEEEEEecCCccCCCHHHHHHcC----------CCHHHHHHH
Confidence 443333 4555 55555333 2245899999999876554 44433 223333332
Q ss_pred HHHHHHHHHHHhhCCCCCeeeccCCCCcEEecC----CccEEEeecccccccCc
Q 012014 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD----EMIGHVGDFGMARFLPA 310 (473)
Q Consensus 261 ~~~i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~----~~~~kl~Dfg~~~~~~~ 310 (473)
+.+...-+-+ ..|++|+|=.|.||+++. ++.+.+-|||+...+..
T Consensus 309 l~~~~~~qIf-----~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 309 LVEAYLEQIF-----KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHHH-----hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 2232222222 458999999999999983 67899999999886644
No 469
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.43 E-value=9.7e-06 Score=70.71 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=80.0
Q ss_pred HHHHHHHHhcCC-CCceeeeeeeeccccCCceeeEEEEEecCCCCHHHH---hcCCCCCCCCCcchhhcHHHHHHHHHHH
Q 012014 189 KSECKAAINIKH-RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW---LRGKDDTNWRPLNFNFLIKKKLDIAIDV 264 (473)
Q Consensus 189 ~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~---l~~~~~~~~~~~~~~~~~~~~~~i~~~i 264 (473)
.+|.-+++.+.+ +++++++|+|- .+++.||...+++... +... ..-+|..+.+|+.++
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG---------~~~v~E~~~~~~~~~~~~~l~~~---------~~~~w~~R~~iA~~l 68 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG---------RFYVVEYVGAGSLYGIYRPLSQF---------LQSPWEQRAKIALQL 68 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC---------CEEEEEeecCccccccccccccc---------cccCHHHHHHHHHHH
Confidence 457888888876 69999999983 2789999987765422 0000 023499999999999
Q ss_pred HHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeeccccccc
Q 012014 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308 (473)
Q Consensus 265 ~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 308 (473)
++.+.+|+......+.-.|++|+|+-+++++.+|++|...+...
T Consensus 69 L~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 69 LELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 99999999654466888999999999999999999999877543
No 470
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.42 E-value=6e-08 Score=91.30 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=52.3
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCC-ccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPE-RAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+.++.|+|||||||+++||+||+.|..........+..+....... ...+.++... ...+..
T Consensus 185 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--- 247 (283)
T cd05080 185 NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM--------------RLPCPK--- 247 (283)
T ss_pred cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC--------------CCCCCC---
Confidence 4568899999999999999999998543211100011000000000 0000001000 000000
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
.+...+..+...|+..+|+.||++.++...++.+
T Consensus 248 --~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 248 --NCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred --CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 0112234456789999999999999999888765
No 471
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.40 E-value=1.1e-07 Score=92.10 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=51.4
Q ss_pred ccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhHH
Q 012014 3 YVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSIIL 82 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (473)
.+++|.|||||||||+|||||.-|..+...... +| -+..+...+.-|. . |
T Consensus 287 PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----Iw-GVGsNsL~LpvPs---t--------------c------- 336 (904)
T KOG4721|consen 287 PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----IW-GVGSNSLHLPVPS---T--------------C------- 336 (904)
T ss_pred CcccccceehhHHHHHHHHhcCCCccccchhee-----EE-eccCCcccccCcc---c--------------C-------
Confidence 478999999999999999999999654322110 00 0111111111111 0 1
Q ss_pred HHHHHhhcccccccccccccccchhhHHHHHHHHHhhc
Q 012014 83 ECLISICRTGVACSAELPNERMKINDVESRLRLIKKKL 120 (473)
Q Consensus 83 ~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~~ 120 (473)
-..+.-+.-.|+...|..||+.+++..-|.......
T Consensus 337 --P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 337 --PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred --chHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 111111123599999999999999988877654433
No 472
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.36 E-value=5.9e-06 Score=75.25 Aligned_cols=152 Identities=16% Similarity=0.220 Sum_probs=84.3
Q ss_pred cceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCC--CceeeeeeeeccccCCceeeEEEEEe
Q 012014 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHR--NIVRVFTAFSGVDYQGARFKAVVYKF 227 (473)
Q Consensus 150 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~ 227 (473)
++.|+.|..+.||+....+ ..+++|..... .....+.+|..++..+... .+.+++...... ......+++|++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~--~~~~~~~~~~~~ 76 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD--EFNGFPYLLMEY 76 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET--EETSEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc--cccccceEEEEE
Confidence 3578999999999999655 69999996532 2346788899998888533 356666543222 222347899999
Q ss_pred cCCCCHHH----------------Hh---cCCCCCCCCCcchh-h---cHHHHHHH------------HHHHHH-HHHHH
Q 012014 228 MPNGSLEE----------------WL---RGKDDTNWRPLNFN-F---LIKKKLDI------------AIDVAC-ALRYL 271 (473)
Q Consensus 228 ~~~g~L~~----------------~l---~~~~~~~~~~~~~~-~---~~~~~~~i------------~~~i~~-~L~~L 271 (473)
++|.++.. .+ +............. . ........ ...+.. .+..+
T Consensus 77 i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T PF01636_consen 77 IPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQEL 156 (239)
T ss_dssp ESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred eccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence 99988877 11 11100000000000 0 00000000 111222 23333
Q ss_pred hh----CCCCCeeeccCCCCcEEec-CCccEEEeeccccc
Q 012014 272 HC----DCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMAR 306 (473)
Q Consensus 272 H~----~~~~~iiH~Dlkp~Nil~~-~~~~~kl~Dfg~~~ 306 (473)
+. .....++|+|+.|.||+++ +++.+-|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 157 EALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 31 1256799999999999999 66666899998775
No 473
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.35 E-value=2.4e-07 Score=97.73 Aligned_cols=88 Identities=25% Similarity=0.297 Sum_probs=56.3
Q ss_pred CCccccccceeehhhhHHHHHhCC-CCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchh
Q 012014 1 MGYVSSYGDVYSFGILLLEMFTGL-RPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSS 79 (473)
Q Consensus 1 ~g~~t~ksDVySfGVvllEl~tg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (473)
+|.+|+|||||||||+|+||+|-- .|.....+. .-+..|.. .+ -+++.-
T Consensus 878 d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-~v~~~~~~----gg---RL~~P~---------------------- 927 (1025)
T KOG1095|consen 878 DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-EVLLDVLE----GG---RLDPPS---------------------- 927 (1025)
T ss_pred hcccccccchhhhHHHHHHHHhCCCCCCCCcchH-HHHHHHHh----CC---ccCCCC----------------------
Confidence 378999999999999999999854 454332221 11222222 11 111110
Q ss_pred hHHHHHHHhhcccccccccccccccchhhHHHHHHHHHhhcc
Q 012014 80 IILECLISICRTGVACSAELPNERMKINDVESRLRLIKKKLL 121 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~~~ 121 (473)
.|-..+.++...|+...|++||+...+..++..+.....
T Consensus 928 ---~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 928 ---YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred ---CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 122333455678999999999999999998887765543
No 474
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.30 E-value=3.7e-06 Score=70.40 Aligned_cols=129 Identities=22% Similarity=0.237 Sum_probs=89.5
Q ss_pred CCccceeecCCCeEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcCCCCce-eeeeeeeccccCCceeeEEEE
Q 012014 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV-RVFTAFSGVDYQGARFKAVVY 225 (473)
Q Consensus 147 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~lv~ 225 (473)
-...+.||+|.+|.||++.+ .|..+|+|+-+ .......+..|+++|..+.-.++. ++|.+- ..++.|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr--~ds~r~~l~kEakiLeil~g~~~~p~vy~yg---------~~~i~m 91 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEW-RGGEVALKVRR--RDSPRRNLEKEAKILEILAGEGVTPEVYFYG---------EDFIRM 91 (201)
T ss_pred hhhhhhhhcccccEEEEeec-cCceEEEEEec--CCcchhhHHHHHHHHHHhhhcCCCceEEEec---------hhhhhh
Confidence 34567899999999999996 45688999855 334567899999999999766654 444331 225679
Q ss_pred EecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCeeeccCCC-C-cEEecCCccEEEeecc
Q 012014 226 KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKP-S-NVLLDDEMIGHVGDFG 303 (473)
Q Consensus 226 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp-~-Nil~~~~~~~kl~Dfg 303 (473)
||+.|-.|.+.-.... .+ -...++++---|- ..||-|+.|.- . ||++. ++.+.|+||.
T Consensus 92 e~i~G~~L~~~~~~~~------------rk----~l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~-~~~~~iIDFd 151 (201)
T COG2112 92 EYIDGRPLGKLEIGGD------------RK----HLLRVLEKAYKLD---RLGIEHGELSRPWKNVLVN-DRDVYIIDFD 151 (201)
T ss_pred hhhcCcchhhhhhccc------------HH----HHHHHHHHHHHHH---HhccchhhhcCCceeEEec-CCcEEEEEcc
Confidence 9998888887654321 11 2334444444455 77898988864 3 55554 4489999999
Q ss_pred cccc
Q 012014 304 MARF 307 (473)
Q Consensus 304 ~~~~ 307 (473)
.|+.
T Consensus 152 ~At~ 155 (201)
T COG2112 152 SATF 155 (201)
T ss_pred chhh
Confidence 8874
No 475
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.28 E-value=4.4e-07 Score=85.33 Aligned_cols=81 Identities=27% Similarity=0.577 Sum_probs=51.0
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+.++.|+|||||||+|+||+| |+.|...... ..+..++.. ....... .
T Consensus 201 ~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~~~i~~---~~~~~~~-----~--------------------- 249 (283)
T cd05048 201 GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVIEMIRS---RQLLPCP-----E--------------------- 249 (283)
T ss_pred CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc---CCcCCCc-----c---------------------
Confidence 567899999999999999998 9888653221 122222211 1000000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRL 115 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~ 115 (473)
.+-..+..+...|+..+|..||+++++...|+.
T Consensus 250 --~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 250 --DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 001122334567999999999999999988763
No 476
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.26 E-value=2.3e-05 Score=68.69 Aligned_cols=134 Identities=18% Similarity=0.216 Sum_probs=91.8
Q ss_pred ccceeecCCCeEEEEEEecCCCEEEEEEeeccC----------------CCCchhHHHHHHHHHhcC------CCCceee
Q 012014 149 SANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR----------------PGGSKSFKSECKAAINIK------HRNIVRV 206 (473)
Q Consensus 149 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~~ 206 (473)
....||+|+.-.||.- .++...+||+..... ....++..+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3567999999999953 566778899887544 223466778887777666 8899999
Q ss_pred eeeeeccccCCceeeEEEEEecCC------CCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHHHHHHHHHHhhCCCCCee
Q 012014 207 FTAFSGVDYQGARFKAVVYKFMPN------GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIA 280 (473)
Q Consensus 207 ~~~~~~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ii 280 (473)
+|+..+ +.-.-+|+|.+.+ -+|.+++.... ++. ...+.+. .-..||- +..|+
T Consensus 83 ~G~veT-----~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----------~~~-~~~~~L~---~f~~~l~---~~~Iv 140 (199)
T PF10707_consen 83 YGFVET-----NLGLGLVVELIRDADGNISPTLEDYLKEGG----------LTE-ELRQALD---EFKRYLL---DHHIV 140 (199)
T ss_pred eEEEec-----CCceEEEEEEEECCCCCcCccHHHHHHcCC----------ccH-HHHHHHH---HHHHHHH---HcCCe
Confidence 999644 4456788888743 36888886543 222 3333333 3345566 67899
Q ss_pred eccCCCCcEEecCC---c-cEEEee-ccccc
Q 012014 281 HCNLKPSNVLLDDE---M-IGHVGD-FGMAR 306 (473)
Q Consensus 281 H~Dlkp~Nil~~~~---~-~~kl~D-fg~~~ 306 (473)
.+|++|.||++... . .+.|+| ||...
T Consensus 141 ~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 141 IRDLNPHNIVVQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred ecCCCcccEEEEecCCCceEEEEEeCCCCcc
Confidence 99999999999532 2 577887 55443
No 477
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.26 E-value=6.9e-07 Score=84.43 Aligned_cols=84 Identities=24% Similarity=0.379 Sum_probs=52.8
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.|+|||||||+++||+| |+.|....... ...+.+. ........+ ..
T Consensus 200 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~---~~~~~~~~~-----~~------------------- 250 (291)
T cd05094 200 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVIECIT---QGRVLERPR-----VC------------------- 250 (291)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHh---CCCCCCCCc-----cC-------------------
Confidence 346889999999999999999 88886432211 1111111 111100000 00
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHHh
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIKK 118 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~ 118 (473)
...+..+...|+..+|++||++.++.+.+..+.+
T Consensus 251 ----~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 251 ----PKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred ----CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 1112344567999999999999999999998865
No 478
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.21 E-value=1.2e-06 Score=82.26 Aligned_cols=84 Identities=19% Similarity=0.369 Sum_probs=52.5
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..|.++|||||||+++||+| |+.|...... ..+.+++.... ....+.. |
T Consensus 186 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~-----~~~~~~~-----------------~----- 236 (279)
T cd05111 186 GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLLEKGE-----RLAQPQI-----------------C----- 236 (279)
T ss_pred CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCC-----cCCCCCC-----------------C-----
Confidence 567899999999999999999 8888653221 12223322110 0011110 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHHh
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIKK 118 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~ 118 (473)
...+..+...|+..+|..||++.++...+..+..
T Consensus 237 ----~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 237 ----TIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0111223457999999999999999988877553
No 479
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.21 E-value=9.3e-07 Score=85.51 Aligned_cols=84 Identities=24% Similarity=0.320 Sum_probs=51.1
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.|+|||||||+|+||+| |+.|.......+ .+. ........... + ...
T Consensus 251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~---~~~~~~~~~~~--~---~~~------------------- 302 (338)
T cd05102 251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFC---QRLKDGTRMRA--P---ENA------------------- 302 (338)
T ss_pred CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHH---HHHhcCCCCCC--C---CCC-------------------
Confidence 346899999999999999997 888865322111 111 11111000000 0 000
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
...+..+...|+..+|..||++.++.+.|+...
T Consensus 303 ----~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 303 ----TPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred ----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011223456799999999999999999888654
No 480
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.20 E-value=2.7e-05 Score=71.47 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=50.3
Q ss_pred eecCCC-eEEEEEEecCCCEEEEEEeeccCCCCchhHHHHHHHHHhcC-CCCceeeeeeeeccccCCceeeEEEEEecCC
Q 012014 153 IGAGNF-GSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK-HRNIVRVFTAFSGVDYQGARFKAVVYKFMPN 230 (473)
Q Consensus 153 lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 230 (473)
|..|.+ ..||+... ++..+.+|+..... ...+.+|++++..+. +--+.+++++.... ...++|||+++|
T Consensus 6 ~~~g~~~~~v~~~~~-~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-----~~~~lv~e~i~G 76 (244)
T cd05150 6 VTEGQSGATVYRLDG-KNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDD-----GRAWLLTSAVPG 76 (244)
T ss_pred cCCCCCcCeEEEEcC-CCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecC-----CccEEEEEeeCC
Confidence 445555 78899874 34788888865332 345778999988884 34455666664321 245899999999
Q ss_pred CCHHHH
Q 012014 231 GSLEEW 236 (473)
Q Consensus 231 g~L~~~ 236 (473)
.+|...
T Consensus 77 ~~l~~~ 82 (244)
T cd05150 77 VPAAAL 82 (244)
T ss_pred ccHhHh
Confidence 877644
No 481
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.19 E-value=7.4e-07 Score=83.73 Aligned_cols=87 Identities=21% Similarity=0.238 Sum_probs=51.5
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcc----------cHHHHHHHhcCCccccccccccccchHHHHHHHhhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDEL----------NLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKA 71 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 71 (473)
+.++.++||||||++++||+||+.|......... ....+.........
T Consensus 187 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 244 (284)
T cd05038 187 SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER---------------------- 244 (284)
T ss_pred CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc----------------------
Confidence 3567899999999999999999988543211110 01111110000000
Q ss_pred cccCcchhhHHHHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 72 SSTCTQSSIILECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
... ...+-..+..+...|+..+|..||++.++...|..+
T Consensus 245 ---~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 245 ---LPR---PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ---CCC---CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 000112334556689999999999999999988754
No 482
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.18 E-value=1.1e-06 Score=81.62 Aligned_cols=81 Identities=20% Similarity=0.234 Sum_probs=49.2
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+.+|.++|||||||+++||+| |+.|..... ..++....... . .+......
T Consensus 180 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~-~----~~~~~~~~------------------- 230 (263)
T cd05052 180 NKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKG-Y----RMERPEGC------------------- 230 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCC-C----CCCCCCCC-------------------
Confidence 456889999999999999999 887754221 11111111110 0 00000000
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRL 115 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~ 115 (473)
-..+..+...|+..+|++||++.++.+.|+.
T Consensus 231 ----~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 231 ----PPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred ----CHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 0112234567999999999999999988865
No 483
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.18 E-value=1.1e-06 Score=81.93 Aligned_cols=82 Identities=26% Similarity=0.350 Sum_probs=50.8
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.|+|||||||+++||+| |+.|...... .++......... .+.. .
T Consensus 185 ~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i~~~~~----~~~~-~--------------------- 233 (268)
T cd05063 185 RKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAINDGFR----LPAP-M--------------------- 233 (268)
T ss_pred CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhcCCC----CCCC-C---------------------
Confidence 456889999999999999998 9998653211 111111111000 0000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
.+...+..+...|+..+|+.||++.++.+.|..+
T Consensus 234 --~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 234 --DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0012233456679999999999999999888653
No 484
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.17 E-value=1.3e-06 Score=80.83 Aligned_cols=82 Identities=27% Similarity=0.389 Sum_probs=52.1
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+.++.++|||||||+++||+| |+.|.+.... ..+..++...... ...+ ..
T Consensus 173 ~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~---~~~~-----~~------------------- 223 (257)
T cd05060 173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGERL---PRPE-----EC------------------- 223 (257)
T ss_pred CCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCcC---CCCC-----CC-------------------
Confidence 457889999999999999998 8888653321 2233333221110 0000 00
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
...+..+...|+..+|.+||++.++...|+.+
T Consensus 224 ----~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 ----PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 01122345679999999999999999988764
No 485
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.17 E-value=6e-07 Score=87.93 Aligned_cols=87 Identities=24% Similarity=0.233 Sum_probs=54.5
Q ss_pred ccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhHH
Q 012014 3 YVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSIIL 82 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (473)
.+|..|||||||+|++||+||.-|......++. -+++..+ .-..|... +..
T Consensus 569 PfS~qSDVYaFGiV~YELltg~lPysi~~~dqI------ifmVGrG-~l~pd~s~-------------~~s--------- 619 (678)
T KOG0193|consen 569 PFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI------IFMVGRG-YLMPDLSK-------------IRS--------- 619 (678)
T ss_pred CCCcccchhhhhHHHHHHHhCcCCcCCCChhhe------EEEeccc-ccCccchh-------------hhc---------
Confidence 478899999999999999999999762211111 1111111 01111110 000
Q ss_pred HHHHHhhcccccccccccccccchhhHHHHHHHHHh
Q 012014 83 ECLISICRTGVACSAELPNERMKINDVESRLRLIKK 118 (473)
Q Consensus 83 ~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~ 118 (473)
.|-..+-++...|+...+++||...++...|+.+..
T Consensus 620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 620 NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 122334455678999999999999999998777654
No 486
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.16 E-value=1.2e-06 Score=82.49 Aligned_cols=80 Identities=28% Similarity=0.510 Sum_probs=48.9
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.++||||||++++||+| |..|..... ..++...........+.+ .
T Consensus 201 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~-----~-------------------- 250 (283)
T cd05091 201 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVIEMIRNRQVLPCPD-----D-------------------- 250 (283)
T ss_pred CCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCCcCCCCC-----C--------------------
Confidence 567889999999999999999 666643221 112222211111100000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLR 114 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~ 114 (473)
+-..+..+...|+...|.+||++.++...|+
T Consensus 251 ---~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 251 ---CPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred ---CCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 0111234456799999999999999988875
No 487
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.16 E-value=1.3e-06 Score=81.52 Aligned_cols=27 Identities=30% Similarity=0.361 Sum_probs=24.0
Q ss_pred CccccccceeehhhhHHHHHhCCCCCC
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPND 28 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~ 28 (473)
+.++.|+|||||||+++||+||+.|..
T Consensus 188 ~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 188 EPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred CCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 457889999999999999999998864
No 488
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.15 E-value=1.6e-06 Score=81.93 Aligned_cols=82 Identities=24% Similarity=0.387 Sum_probs=51.1
Q ss_pred ccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 3 YVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
..+.++|||||||+++||+| |+.|..... ...+.+++...... .. + ...
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~~---~~--~---~~~-------------------- 254 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--PERLFNLLKTGYRM---ER--P---ENC-------------------- 254 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCCC---CC--C---CCC--------------------
Confidence 46889999999999999999 887764321 11222222111100 00 0 000
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
...+..+...|+..+|.+||++.++...|+.+-
T Consensus 255 ---~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 255 ---SEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ---CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 111223456799999999999999999988764
No 489
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.15 E-value=1.6e-06 Score=80.89 Aligned_cols=81 Identities=20% Similarity=0.361 Sum_probs=49.3
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.++||||||++++||+| |..|.....+ ..+.++... ........ .
T Consensus 190 ~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~~---~~~~~~~~-----~-------------------- 239 (273)
T cd05035 190 RVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLRH---GNRLKQPE-----D-------------------- 239 (273)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc---CCCCCCCc-----C--------------------
Confidence 346789999999999999999 7777543211 112222211 10000000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRL 115 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~ 115 (473)
+...+..+...|+..+|.+||++.++...|+.
T Consensus 240 ---~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 240 ---CLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 01122333456999999999999999988765
No 490
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.15 E-value=1.4e-06 Score=81.12 Aligned_cols=84 Identities=19% Similarity=0.131 Sum_probs=50.2
Q ss_pred ccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhHH
Q 012014 3 YVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSIIL 82 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (473)
..+.++|||||||+++||+||+.|..... .....+........ .+..... .
T Consensus 182 ~~~~~~Di~slG~~l~el~~g~~p~~~~~---~~~~~~~~~~~~~~-----~~~~~~~--~------------------- 232 (267)
T cd08228 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLFSLCQKIEQCD-----YPPLPTE--H------------------- 232 (267)
T ss_pred CCCchhhHHHHHHHHHHHhcCCCCCcccc---ccHHHHHHHHhcCC-----CCCCChh--h-------------------
Confidence 46789999999999999999999964321 12222222111100 0000000 0
Q ss_pred HHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 83 ECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 83 ~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
.-..+..+...|+...|.+||++.++...++..
T Consensus 233 -~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 233 -YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 001122233469999999999999999888764
No 491
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.13 E-value=1.9e-06 Score=81.72 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=21.3
Q ss_pred cccccccccccccccchhhHHHHHH
Q 012014 90 RTGVACSAELPNERMKINDVESRLR 114 (473)
Q Consensus 90 ~~~~~C~~~~~~~Rp~m~~v~~~l~ 114 (473)
.+...|+..+|..||++.++...|+
T Consensus 271 ~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 271 KLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4566899999999999999988764
No 492
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.13 E-value=1.6e-06 Score=80.46 Aligned_cols=84 Identities=23% Similarity=0.309 Sum_probs=50.0
Q ss_pred CccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
+..+.|+|||||||+++||+||..|..... ....+..++.. .... ..+. ..
T Consensus 177 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~~~~---~~~~--~~~~---~~-------------------- 227 (262)
T cd05058 177 QKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVYLLQ---GRRL--LQPE---YC-------------------- 227 (262)
T ss_pred CccchHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhc---CCCC--CCCC---cC--------------------
Confidence 456889999999999999999766532211 11122222211 1000 0000 00
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
...+..+...|+...|++||++.++...++...
T Consensus 228 ---~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 228 ---PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 011223456799999999999999999887653
No 493
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.13 E-value=1.7e-06 Score=79.97 Aligned_cols=78 Identities=23% Similarity=0.409 Sum_probs=48.1
Q ss_pred ccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhH
Q 012014 3 YVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSII 81 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
..+.|+|||||||+|+||+| |+.|..... .......+.... . ...+...
T Consensus 177 ~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--~~~~~~~i~~~~--~---~~~~~~~----------------------- 226 (256)
T cd05114 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--NYEVVEMISRGF--R---LYRPKLA----------------------- 226 (256)
T ss_pred ccchhhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCC--C---CCCCCCC-----------------------
Confidence 45789999999999999999 887764321 112222222110 0 0011000
Q ss_pred HHHHHHhhcccccccccccccccchhhHHHHH
Q 012014 82 LECLISICRTGVACSAELPNERMKINDVESRL 113 (473)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l 113 (473)
...+..+...|+..+|.+||++.++...|
T Consensus 227 ---~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 227 ---SMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 01233456679999999999999997765
No 494
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.13 E-value=2.2e-06 Score=79.76 Aligned_cols=84 Identities=19% Similarity=0.124 Sum_probs=50.5
Q ss_pred ccccccceeehhhhHHHHHhCCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhhHH
Q 012014 3 YVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSIIL 82 (473)
Q Consensus 3 ~~t~ksDVySfGVvllEl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (473)
..+.++|||||||+++||+||+.|.... ...+.++...........+... ..
T Consensus 182 ~~~~~~Di~slG~il~~l~~g~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~--------------------- 233 (267)
T cd08224 182 GYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLYSLCKKIEKCDYPPLPAD----HY--------------------- 233 (267)
T ss_pred CCCchhcHHHHHHHHHHHHHCCCCcccC---CccHHHHHhhhhcCCCCCCChh----hc---------------------
Confidence 4678999999999999999999986422 1222222221111100000000 00
Q ss_pred HHHHHhhcccccccccccccccchhhHHHHHHHH
Q 012014 83 ECLISICRTGVACSAELPNERMKINDVESRLRLI 116 (473)
Q Consensus 83 ~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~ 116 (473)
...+..+...|+..+|..||++.++...++.+
T Consensus 234 --~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 234 --SEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --CHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 01122334569999999999999998888764
No 495
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.12 E-value=6.9e-05 Score=65.07 Aligned_cols=131 Identities=24% Similarity=0.409 Sum_probs=92.4
Q ss_pred cCCCCccceeecCCC-eEEEEEEecCCCEEEEEEeecc---CC------------------CCchhHHHHHHHHHhcC--
Q 012014 144 TNGFSSANLIGAGNF-GSVYNGTLFDGTTIAVKVFNLI---RP------------------GGSKSFKSECKAAINIK-- 199 (473)
Q Consensus 144 ~~~~~~~~~lg~G~~-g~V~~~~~~~~~~vavK~~~~~---~~------------------~~~~~~~~E~~~l~~l~-- 199 (473)
+.+++..+.||.|.- |.||+++. +|+.+|+|+++.. .. .....|..|.+...+|+
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 378889999999999 99999985 6789999995421 00 11235788999888774
Q ss_pred -CCCc--eeeeeeeeccc-------------cCCceeeEEEEEecCCCCHHHHhcCCCCCCCCCcchhhcHHHHHHHHHH
Q 012014 200 -HRNI--VRVFTAFSGVD-------------YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263 (473)
Q Consensus 200 -h~ni--v~~~~~~~~~~-------------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 263 (473)
+.++ |+++|+..-.. ........||.||.+... .++.. -+.+
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------------~~~~~----~~~~ 172 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------------PLQIR----DIPQ 172 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------------ccchh----HHHH
Confidence 4566 99999974321 011223467888776533 01122 3456
Q ss_pred HHHHHHHHhhCCCCCeeeccCCCCcEEecCCccEEEeecccc
Q 012014 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305 (473)
Q Consensus 264 i~~~L~~LH~~~~~~iiH~Dlkp~Nil~~~~~~~kl~Dfg~~ 305 (473)
|.+-+..+| ..||+-+|+++.|.. .-||+|||.+
T Consensus 173 ~~~dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 173 MLRDLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 777788899 999999999999986 2389999864
No 496
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.12 E-value=1.8e-06 Score=83.39 Aligned_cols=84 Identities=24% Similarity=0.333 Sum_probs=51.5
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..|.|+|||||||+|+||+| |+.|.......+ .+... .......... .
T Consensus 250 ~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~----~~~~~~~~~~----~--------------------- 299 (337)
T cd05054 250 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRR----LKEGTRMRAP----E--------------------- 299 (337)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHH----HhccCCCCCC----c---------------------
Confidence 346889999999999999998 888864321111 11111 1111000000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIK 117 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~ 117 (473)
.+...+..+...|+...|+.||++.++...|..+-
T Consensus 300 --~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 300 --YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00122334567799999999999999999887653
No 497
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.12 E-value=1.9e-06 Score=79.98 Aligned_cols=81 Identities=27% Similarity=0.362 Sum_probs=49.1
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..|.|+|||||||+++||+| |+.|...... ..+...+..... . . ....
T Consensus 179 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~--~----~--~~~~-------------------- 228 (261)
T cd05068 179 NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQVDQGYR--M----P--CPPG-------------------- 228 (261)
T ss_pred CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC--C----C--CCCc--------------------
Confidence 356889999999999999999 8777543211 111111111000 0 0 0000
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHH
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRL 115 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~ 115 (473)
+...+..+...|+..+|..||++.++...|+.
T Consensus 229 ---~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 229 ---CPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01123344567999999999999999988763
No 498
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.11 E-value=2.3e-06 Score=80.76 Aligned_cols=85 Identities=22% Similarity=0.383 Sum_probs=52.5
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.|+|||||||+++||+| |+.|....... .+...+. ....... . ...
T Consensus 197 ~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~~~~i~---~~~~~~~-~----~~~------------------- 247 (288)
T cd05093 197 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECIT---QGRVLQR-P----RTC------------------- 247 (288)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH---cCCcCCC-C----CCC-------------------
Confidence 356889999999999999999 87775432211 1111111 1100000 0 000
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHHhh
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIKKK 119 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~ 119 (473)
...+..+...|+..+|.+||++.++...++.+.+.
T Consensus 248 ----~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 248 ----PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 01133445679999999999999999998877643
No 499
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.11 E-value=2.2e-06 Score=80.67 Aligned_cols=26 Identities=31% Similarity=0.425 Sum_probs=22.7
Q ss_pred CccccccceeehhhhHHHHHhCCCCC
Q 012014 2 GYVSSYGDVYSFGILLLEMFTGLRPN 27 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~tg~~~~ 27 (473)
+..+.++|||||||+++||+||+.|.
T Consensus 187 ~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 187 SKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred CCCCccccchhhhhhhhhhhcCCCCC
Confidence 35688999999999999999998763
No 500
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.11 E-value=2.6e-06 Score=81.01 Aligned_cols=85 Identities=18% Similarity=0.376 Sum_probs=52.8
Q ss_pred CccccccceeehhhhHHHHHh-CCCCCCCCCCCcccHHHHHHHhcCCccccccccccccchHHHHHHHhhhcccCcchhh
Q 012014 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEEEETMYKKASSTCTQSSI 80 (473)
Q Consensus 2 g~~t~ksDVySfGVvllEl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
+..+.|+|||||||+++||+| |+.|..... ...+.+++... .. ...+.. +
T Consensus 186 ~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~---~~--~~~~~~-----------------~----- 236 (303)
T cd05110 186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKG---ER--LPQPPI-----------------C----- 236 (303)
T ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCC---CC--CCCCCC-----------------C-----
Confidence 346889999999999999998 888864321 11233332210 00 000000 0
Q ss_pred HHHHHHHhhcccccccccccccccchhhHHHHHHHHHhh
Q 012014 81 ILECLISICRTGVACSAELPNERMKINDVESRLRLIKKK 119 (473)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~Rp~m~~v~~~l~~~~~~ 119 (473)
...+..+...|+..+|+.||++.++...++.+...
T Consensus 237 ----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 237 ----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11123345679999999999999999998876543
Done!