Query 012015
Match_columns 473
No_of_seqs 199 out of 2618
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 07:43:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012015.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012015hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.2E-73 2.7E-78 554.0 43.5 410 59-473 34-463 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 2.4E-71 5.1E-76 535.1 37.2 425 37-473 7-451 (528)
3 KOG1177 Long chain fatty acid 100.0 1.6E-70 3.5E-75 496.5 33.9 429 38-473 50-516 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 5.2E-69 1.1E-73 540.3 44.0 431 36-473 9-456 (534)
5 PLN02614 long-chain acyl-CoA s 100.0 2.5E-69 5.3E-74 555.6 42.5 426 38-473 45-552 (666)
6 PTZ00342 acyl-CoA synthetase; 100.0 4.6E-69 1E-73 552.1 44.1 450 15-473 39-626 (746)
7 PLN02574 4-coumarate--CoA liga 100.0 7.1E-68 1.5E-72 538.3 50.1 459 7-473 10-485 (560)
8 PLN02861 long-chain-fatty-acid 100.0 2.6E-67 5.6E-72 541.1 42.3 425 38-473 43-549 (660)
9 PLN02736 long-chain acyl-CoA s 100.0 6.3E-67 1.4E-71 539.2 43.7 428 35-473 41-543 (651)
10 PRK06334 long chain fatty acid 100.0 1.9E-66 4.2E-71 524.4 43.3 425 38-473 19-471 (539)
11 COG1022 FAA1 Long-chain acyl-C 100.0 1.9E-66 4.1E-71 507.7 36.8 415 38-473 16-505 (613)
12 PTZ00237 acetyl-CoA synthetase 100.0 1.1E-65 2.4E-70 527.8 42.6 430 35-473 55-547 (647)
13 PLN02654 acetate-CoA ligase 100.0 1.2E-65 2.7E-70 529.2 42.6 430 35-473 84-568 (666)
14 PLN02860 o-succinylbenzoate-Co 100.0 1.2E-65 2.6E-70 522.3 41.8 423 37-473 6-469 (563)
15 PLN02246 4-coumarate--CoA liga 100.0 1.4E-64 3.1E-69 512.3 48.8 443 21-473 9-467 (537)
16 PRK07788 acyl-CoA synthetase; 100.0 2.4E-65 5.2E-70 519.3 41.4 417 38-473 49-482 (549)
17 TIGR02316 propion_prpE propion 100.0 8.5E-65 1.8E-69 521.6 44.7 431 35-473 48-527 (628)
18 PLN02387 long-chain-fatty-acid 100.0 4E-65 8.7E-70 526.9 39.6 427 38-473 58-591 (696)
19 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 4.2E-64 9.1E-69 517.2 45.2 431 35-473 53-530 (625)
20 KOG1256 Long-chain acyl-CoA sy 100.0 2.7E-64 5.8E-69 484.9 39.2 429 35-473 72-583 (691)
21 PRK07529 AMP-binding domain pr 100.0 8.7E-64 1.9E-68 513.7 45.8 426 37-473 24-500 (632)
22 PLN02330 4-coumarate--CoA liga 100.0 1.5E-63 3.3E-68 505.5 46.5 432 37-473 27-472 (546)
23 PRK13295 cyclohexanecarboxylat 100.0 2.5E-63 5.4E-68 504.1 45.8 426 38-473 24-474 (547)
24 PRK00174 acetyl-CoA synthetase 100.0 3.1E-63 6.8E-68 511.6 45.9 431 35-473 63-538 (637)
25 PRK08314 long-chain-fatty-acid 100.0 2.8E-63 6.2E-68 504.4 44.4 422 38-473 10-471 (546)
26 PRK09274 peptide synthase; Pro 100.0 1.4E-63 3E-68 507.0 41.0 422 38-473 6-475 (552)
27 COG1021 EntE Peptide arylation 100.0 1.9E-65 4.1E-70 453.4 23.7 424 38-473 28-469 (542)
28 PRK13382 acyl-CoA synthetase; 100.0 3E-63 6.6E-68 501.8 42.9 417 38-473 43-471 (537)
29 PRK05677 long-chain-fatty-acid 100.0 6.9E-63 1.5E-67 502.2 45.7 426 37-473 23-488 (562)
30 PRK07638 acyl-CoA synthetase; 100.0 4.4E-63 9.5E-68 495.8 43.3 416 38-473 1-416 (487)
31 PTZ00216 acyl-CoA synthetase; 100.0 7.7E-64 1.7E-68 518.7 37.9 420 37-468 68-587 (700)
32 PLN02430 long-chain-fatty-acid 100.0 4.3E-63 9.4E-68 508.8 42.8 427 37-473 41-549 (660)
33 PRK06839 acyl-CoA synthetase; 100.0 4.6E-63 9.9E-68 497.4 41.0 418 39-473 3-426 (496)
34 PRK06060 acyl-CoA synthetase; 100.0 4.7E-63 1E-67 515.3 41.5 412 38-473 4-420 (705)
35 PRK06145 acyl-CoA synthetase; 100.0 2.4E-62 5.2E-67 492.1 43.9 423 38-473 2-428 (497)
36 PRK05857 acyl-CoA synthetase; 100.0 1.2E-62 2.6E-67 497.7 41.7 428 37-473 13-457 (540)
37 PRK08180 feruloyl-CoA synthase 100.0 1.1E-62 2.4E-67 504.6 41.9 423 36-473 37-502 (614)
38 PRK07769 long-chain-fatty-acid 100.0 5.1E-63 1.1E-67 509.5 39.3 439 20-473 3-521 (631)
39 PRK10524 prpE propionyl-CoA sy 100.0 2.5E-62 5.5E-67 504.4 43.3 432 35-473 49-528 (629)
40 PRK03640 O-succinylbenzoic aci 100.0 5.6E-62 1.2E-66 487.8 43.4 414 38-473 2-415 (483)
41 PRK04319 acetyl-CoA synthetase 100.0 5E-62 1.1E-66 496.8 43.5 425 37-473 41-487 (570)
42 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1E-61 2.2E-66 490.3 45.1 425 36-473 21-463 (527)
43 PRK07656 long-chain-fatty-acid 100.0 5.2E-62 1.1E-66 491.9 42.5 424 38-473 5-447 (513)
44 PRK07786 long-chain-fatty-acid 100.0 1.5E-61 3.3E-66 490.4 45.6 427 35-473 14-454 (542)
45 PRK05605 long-chain-fatty-acid 100.0 1.6E-61 3.5E-66 493.9 44.6 426 38-473 32-500 (573)
46 PRK06155 crotonobetaine/carnit 100.0 2.8E-61 6E-66 487.8 45.9 421 36-473 19-455 (542)
47 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.1E-61 4.6E-66 489.2 45.1 426 38-473 22-472 (538)
48 PRK12467 peptide synthase; Pro 100.0 2.1E-62 4.6E-67 579.5 42.1 419 38-473 3095-3526(3956)
49 PRK12582 acyl-CoA synthetase; 100.0 4.6E-62 9.9E-67 501.1 38.9 428 30-473 41-514 (624)
50 PRK08315 AMP-binding domain pr 100.0 3.9E-61 8.5E-66 490.1 45.2 430 38-473 16-482 (559)
51 PRK05852 acyl-CoA synthetase; 100.0 2.3E-61 5E-66 488.5 42.6 426 38-473 16-463 (534)
52 PRK07514 malonyl-CoA synthase; 100.0 4.5E-61 9.8E-66 483.8 44.1 423 38-473 3-432 (504)
53 PRK03584 acetoacetyl-CoA synth 100.0 4.6E-61 1E-65 496.7 44.8 426 35-473 83-553 (655)
54 PRK08316 acyl-CoA synthetase; 100.0 3.3E-61 7.2E-66 487.2 42.3 424 38-473 11-450 (523)
55 PLN03052 acetate--CoA ligase; 100.0 8.9E-61 1.9E-65 494.3 45.5 430 35-473 171-645 (728)
56 PRK10252 entF enterobactin syn 100.0 1.8E-61 3.9E-66 536.9 43.2 417 38-472 458-891 (1296)
57 PRK12583 acyl-CoA synthetase; 100.0 1E-60 2.3E-65 487.1 44.4 429 38-473 18-483 (558)
58 TIGR03443 alpha_am_amid L-amin 100.0 2E-61 4.3E-66 538.3 41.9 426 38-472 236-732 (1389)
59 PRK06087 short chain acyl-CoA 100.0 9.4E-61 2E-65 485.7 42.9 424 38-473 23-465 (547)
60 PRK09088 acyl-CoA synthetase; 100.0 1.2E-60 2.6E-65 478.4 42.9 409 47-473 4-416 (488)
61 PRK07470 acyl-CoA synthetase; 100.0 1.1E-60 2.4E-65 483.3 42.9 427 35-473 4-449 (528)
62 PRK05851 long-chain-fatty-acid 100.0 1.6E-61 3.5E-66 487.9 36.6 414 40-473 4-450 (525)
63 PRK12492 long-chain-fatty-acid 100.0 1.3E-60 2.9E-65 485.4 43.5 426 38-473 24-496 (562)
64 PRK08008 caiC putative crotono 100.0 2.3E-60 4.9E-65 479.9 44.9 425 38-473 7-453 (517)
65 PRK07059 Long-chain-fatty-acid 100.0 1.8E-60 4E-65 484.4 43.9 428 35-473 20-490 (557)
66 PLN03102 acyl-activating enzym 100.0 1.7E-60 3.6E-65 485.2 43.3 423 38-473 14-475 (579)
67 PRK13388 acyl-CoA synthetase; 100.0 2.6E-60 5.6E-65 480.5 44.0 415 38-473 3-435 (540)
68 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.4E-60 7.4E-65 488.1 45.6 425 35-473 84-554 (652)
69 PRK12316 peptide synthase; Pro 100.0 4E-61 8.6E-66 577.0 44.8 421 38-473 511-941 (5163)
70 PRK12467 peptide synthase; Pro 100.0 2.8E-61 6.1E-66 570.0 42.9 422 38-473 1574-2009(3956)
71 PRK07867 acyl-CoA synthetase; 100.0 5.3E-60 1.2E-64 476.7 45.7 416 38-473 5-436 (529)
72 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.8E-60 6E-65 479.5 43.4 420 40-473 2-449 (515)
73 PRK06187 long-chain-fatty-acid 100.0 3.3E-60 7.2E-65 479.8 43.3 424 37-473 5-450 (521)
74 PRK13383 acyl-CoA synthetase; 100.0 3.3E-60 7.1E-65 478.1 42.3 414 37-473 34-451 (516)
75 PRK12476 putative fatty-acid-- 100.0 1.2E-60 2.6E-65 489.8 39.1 419 38-472 34-532 (612)
76 PRK06164 acyl-CoA synthetase; 100.0 2.6E-60 5.7E-65 481.8 40.7 426 37-473 9-461 (540)
77 PRK08043 bifunctional acyl-[ac 100.0 1.9E-60 4.2E-65 496.0 40.2 419 37-473 203-646 (718)
78 PRK06178 acyl-CoA synthetase; 100.0 1.6E-59 3.5E-64 478.5 45.6 445 19-473 15-497 (567)
79 PRK12316 peptide synthase; Pro 100.0 1.2E-60 2.7E-65 572.8 43.5 421 38-473 2003-2436(5163)
80 PRK10946 entE enterobactin syn 100.0 9.7E-60 2.1E-64 476.4 42.7 422 37-473 24-464 (536)
81 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.1E-60 2E-64 474.1 41.6 419 39-473 1-428 (502)
82 PRK08751 putative long-chain f 100.0 2.8E-59 6E-64 476.3 45.0 444 20-473 5-492 (560)
83 PRK08633 2-acyl-glycerophospho 100.0 5.7E-60 1.2E-64 519.9 42.9 428 37-473 614-1076(1146)
84 PRK06710 long-chain-fatty-acid 100.0 3.8E-59 8.3E-64 475.4 45.4 424 38-473 24-486 (563)
85 PRK06188 acyl-CoA synthetase; 100.0 1.7E-59 3.6E-64 474.3 42.3 424 38-473 12-448 (524)
86 PF00501 AMP-binding: AMP-bind 100.0 3.2E-61 6.9E-66 473.3 28.1 394 44-447 1-417 (417)
87 PRK08279 long-chain-acyl-CoA s 100.0 1E-59 2.3E-64 482.6 40.0 423 35-473 34-494 (600)
88 PRK13390 acyl-CoA synthetase; 100.0 2E-59 4.4E-64 471.0 40.2 411 47-473 6-434 (501)
89 PRK05691 peptide synthase; Val 100.0 1.4E-59 3E-64 560.3 44.6 419 38-473 1131-1560(4334)
90 PRK05691 peptide synthase; Val 100.0 9.3E-60 2E-64 561.7 42.4 417 38-472 3720-4156(4334)
91 PLN02479 acetate-CoA ligase 100.0 1.1E-58 2.3E-63 471.7 42.9 424 38-473 20-485 (567)
92 PRK07008 long-chain-fatty-acid 100.0 7.2E-59 1.6E-63 470.4 40.9 423 37-473 9-464 (539)
93 PRK07787 acyl-CoA synthetase; 100.0 1.1E-58 2.3E-63 461.8 41.0 389 56-473 14-406 (471)
94 PRK05620 long-chain-fatty-acid 100.0 1.2E-58 2.6E-63 472.6 42.0 427 37-473 9-485 (576)
95 TIGR03205 pimA dicarboxylate-- 100.0 7.8E-58 1.7E-62 463.5 45.7 424 38-473 21-476 (541)
96 PRK08974 long-chain-fatty-acid 100.0 1.6E-57 3.4E-62 463.2 46.8 425 38-473 23-487 (560)
97 PRK04813 D-alanine--poly(phosp 100.0 3.7E-58 8E-63 462.7 41.8 420 38-473 2-430 (503)
98 PRK06018 putative acyl-CoA syn 100.0 6.2E-58 1.3E-62 464.1 43.6 425 35-473 7-465 (542)
99 TIGR02262 benz_CoA_lig benzoat 100.0 9.6E-58 2.1E-62 459.6 43.6 419 40-473 6-439 (508)
100 TIGR01733 AA-adenyl-dom amino 100.0 2.9E-57 6.3E-62 444.0 39.3 394 71-471 1-408 (408)
101 PRK08162 acyl-CoA synthetase; 100.0 8.9E-57 1.9E-61 456.6 44.1 424 38-473 18-471 (545)
102 PRK05850 acyl-CoA synthetase; 100.0 1.5E-57 3.2E-62 465.1 37.8 419 38-472 1-489 (578)
103 PRK13391 acyl-CoA synthetase; 100.0 1.1E-56 2.3E-61 452.2 42.3 412 46-473 5-437 (511)
104 KOG1180 Acyl-CoA synthetase [L 100.0 4.2E-58 9.1E-63 422.7 28.4 430 35-473 38-571 (678)
105 PRK09192 acyl-CoA synthetase; 100.0 2.6E-57 5.7E-62 462.6 37.2 421 38-473 21-495 (579)
106 PRK07798 acyl-CoA synthetase; 100.0 2.9E-56 6.2E-61 452.3 44.2 420 38-473 3-463 (533)
107 PRK06814 acylglycerophosphoeth 100.0 1.3E-56 2.8E-61 491.5 44.6 420 37-473 630-1065(1140)
108 PRK07868 acyl-CoA synthetase; 100.0 1.1E-56 2.5E-61 478.3 42.9 414 37-473 446-891 (994)
109 PRK07445 O-succinylbenzoic aci 100.0 4.6E-57 1E-61 445.2 35.8 361 68-473 18-379 (452)
110 PRK12406 long-chain-fatty-acid 100.0 6.8E-56 1.5E-60 446.3 42.5 402 59-473 3-434 (509)
111 PRK08276 long-chain-fatty-acid 100.0 4E-56 8.7E-61 447.4 40.1 397 66-473 8-424 (502)
112 PRK09029 O-succinylbenzoic aci 100.0 4.7E-56 1E-60 441.4 38.2 383 39-473 3-386 (458)
113 KOG1175 Acyl-CoA synthetase [L 100.0 4.1E-56 8.8E-61 429.8 33.7 433 35-473 60-530 (626)
114 PLN03051 acyl-activating enzym 100.0 9.2E-56 2E-60 443.0 36.6 368 102-473 1-413 (499)
115 PRK07768 long-chain-fatty-acid 100.0 3E-55 6.6E-60 445.2 39.4 417 39-472 3-468 (545)
116 TIGR01923 menE O-succinylbenzo 100.0 3E-54 6.5E-59 426.3 38.9 375 71-473 1-375 (436)
117 PRK08308 acyl-CoA synthetase; 100.0 1.1E-52 2.3E-57 411.5 39.0 344 61-473 2-346 (414)
118 KOG1179 Very long-chain acyl-C 100.0 1.6E-52 3.6E-57 387.5 35.9 424 37-473 76-543 (649)
119 COG1020 EntF Non-ribosomal pep 100.0 2E-45 4.3E-50 380.2 37.5 410 38-464 227-642 (642)
120 PTZ00297 pantothenate kinase; 100.0 2.9E-45 6.2E-50 390.8 36.6 398 31-473 420-892 (1452)
121 PRK07824 O-succinylbenzoic aci 100.0 7.3E-40 1.6E-44 314.6 28.7 253 188-473 31-288 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 5.6E-34 1.2E-38 272.3 23.3 232 192-472 95-329 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.4E-33 3E-38 276.5 23.9 258 190-467 73-344 (422)
124 KOG3628 Predicted AMP-binding 100.0 8.5E-30 1.8E-34 251.5 31.1 430 38-472 770-1284(1363)
125 TIGR03335 F390_ftsA coenzyme F 100.0 2.9E-28 6.3E-33 238.9 22.5 256 190-464 84-353 (445)
126 TIGR03089 conserved hypothetic 99.9 5.7E-26 1.2E-30 201.1 21.6 205 44-283 2-227 (227)
127 KOG1178 Non-ribosomal peptide 99.9 5.1E-26 1.1E-30 231.8 21.2 422 39-472 37-508 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.9 1.2E-24 2.5E-29 202.6 22.2 261 188-467 86-360 (438)
129 KOG3628 Predicted AMP-binding 99.7 1.5E-16 3.3E-21 158.7 21.8 421 39-472 95-635 (1363)
130 TIGR02304 aden_form_hyp probab 99.7 9.5E-15 2.1E-19 140.3 20.5 241 194-471 101-363 (430)
131 PF04443 LuxE: Acyl-protein sy 99.3 5.8E-10 1.3E-14 105.0 19.9 228 190-442 87-350 (365)
132 PRK09188 serine/threonine prot 99.2 5.3E-11 1.2E-15 111.9 7.1 52 416-473 207-262 (365)
133 PF03321 GH3: GH3 auxin-respon 98.2 2.4E-05 5.1E-10 78.4 14.1 134 306-463 266-418 (528)
134 PLN02247 indole-3-acetic acid- 98.2 0.00037 8E-09 69.6 21.8 138 306-463 292-464 (606)
135 PLN02620 indole-3-acetic acid- 98.1 0.00041 9E-09 69.2 19.3 138 306-463 303-470 (612)
136 PLN02249 indole-3-acetic acid- 98.1 0.00026 5.5E-09 71.3 17.4 133 306-462 301-456 (597)
137 COG1541 PaaK Coenzyme F390 syn 95.7 0.088 1.9E-06 50.6 10.0 87 69-157 109-197 (438)
138 TIGR02155 PA_CoA_ligase phenyl 89.7 2.7 5.8E-05 41.3 10.1 86 69-156 94-181 (422)
139 TIGR03335 F390_ftsA coenzyme F 89.3 3.7 8E-05 40.7 10.7 82 68-153 104-187 (445)
140 TIGR03089 conserved hypothetic 84.8 6.2 0.00013 35.0 8.6 76 56-143 149-226 (227)
141 PRK06187 long-chain-fatty-acid 80.9 17 0.00038 36.5 11.3 97 56-157 166-270 (521)
142 PRK07656 long-chain-fatty-acid 78.8 14 0.0003 37.3 9.7 97 56-157 165-270 (513)
143 PRK06334 long chain fatty acid 76.8 25 0.00053 35.9 10.9 98 56-157 182-288 (539)
144 PF00501 AMP-binding: AMP-bind 74.8 12 0.00027 36.3 7.9 98 56-157 154-262 (417)
145 TIGR01733 AA-adenyl-dom amino 74.2 41 0.00089 32.5 11.4 98 56-157 119-226 (408)
146 PRK08315 AMP-binding domain pr 72.9 36 0.00079 34.7 11.1 84 68-155 217-302 (559)
147 PLN03051 acyl-activating enzym 70.9 41 0.00088 33.9 10.7 98 56-157 118-223 (499)
148 PRK12583 acyl-CoA synthetase; 70.7 53 0.0012 33.5 11.7 96 56-155 200-304 (558)
149 PRK04319 acetyl-CoA synthetase 69.1 36 0.00077 35.0 10.0 98 56-157 204-310 (570)
150 TIGR03590 PseG pseudaminic aci 69.1 57 0.0012 29.9 10.3 95 67-169 9-112 (279)
151 PLN02246 4-coumarate--CoA liga 66.6 48 0.001 33.7 10.2 100 56-156 178-286 (537)
152 PLN02860 o-succinylbenzoate-Co 64.3 82 0.0018 32.3 11.5 97 56-157 171-275 (563)
153 KOG1177 Long chain fatty acid 64.2 66 0.0014 31.7 9.6 98 56-157 233-339 (596)
154 TIGR03098 ligase_PEP_1 acyl-Co 63.1 72 0.0016 32.0 10.8 85 68-157 179-264 (515)
155 PRK08308 acyl-CoA synthetase; 62.8 74 0.0016 31.0 10.5 97 56-157 100-205 (414)
156 PRK08316 acyl-CoA synthetase; 61.4 81 0.0018 31.7 10.8 97 56-157 170-275 (523)
157 COG0399 WecE Predicted pyridox 60.8 48 0.001 31.8 8.1 64 80-148 60-128 (374)
158 PRK07008 long-chain-fatty-acid 60.7 60 0.0013 33.0 9.7 88 68-157 194-282 (539)
159 TIGR01923 menE O-succinylbenzo 60.5 57 0.0012 31.9 9.3 95 56-157 110-212 (436)
160 PRK08314 long-chain-fatty-acid 59.7 63 0.0014 32.8 9.7 96 56-156 189-293 (546)
161 PRK06188 acyl-CoA synthetase; 59.6 87 0.0019 31.6 10.6 97 56-157 167-270 (524)
162 cd07050 BMC_EutL_repeat2 ethan 59.6 14 0.00031 26.0 3.3 41 83-123 3-43 (87)
163 PRK08043 bifunctional acyl-[ac 59.5 89 0.0019 33.2 11.0 95 56-154 364-467 (718)
164 PRK03640 O-succinylbenzoic aci 57.8 97 0.0021 30.8 10.5 97 56-157 140-244 (483)
165 PF01041 DegT_DnrJ_EryC1: DegT 57.6 28 0.00062 33.3 6.3 64 80-148 51-119 (363)
166 TIGR02262 benz_CoA_lig benzoat 57.1 94 0.002 31.2 10.4 97 56-155 160-265 (508)
167 TIGR02379 ECA_wecE TDP-4-keto- 55.1 56 0.0012 31.5 7.9 62 82-148 59-125 (376)
168 PRK07638 acyl-CoA synthetase; 54.5 1.3E+02 0.0027 30.1 10.7 85 68-157 161-246 (487)
169 PRK07470 acyl-CoA synthetase; 54.4 1.2E+02 0.0026 30.6 10.7 100 56-157 162-269 (528)
170 PRK05620 long-chain-fatty-acid 53.5 1.3E+02 0.0027 31.0 10.7 98 56-155 180-285 (576)
171 PRK13237 tyrosine phenol-lyase 53.4 1E+02 0.0022 30.6 9.1 48 90-142 112-174 (460)
172 PLN02614 long-chain acyl-CoA s 53.0 88 0.0019 32.9 9.6 99 56-157 222-330 (666)
173 TIGR02316 propion_prpE propion 53.0 1.2E+02 0.0026 31.6 10.5 99 56-157 231-341 (628)
174 PRK07529 AMP-binding domain pr 52.3 1.2E+02 0.0025 31.8 10.3 98 56-157 212-323 (632)
175 PRK13295 cyclohexanecarboxylat 52.2 1.5E+02 0.0032 30.2 10.9 97 56-157 196-301 (547)
176 PLN02565 cysteine synthase 51.9 1.2E+02 0.0025 28.6 9.2 91 58-151 31-122 (322)
177 PLN02736 long-chain acyl-CoA s 51.0 1.4E+02 0.0029 31.4 10.6 100 211-315 78-180 (651)
178 PRK11706 TDP-4-oxo-6-deoxy-D-g 50.9 78 0.0017 30.5 8.2 55 90-148 66-125 (375)
179 COG1167 ARO8 Transcriptional r 50.4 1.7E+02 0.0037 29.1 10.6 56 93-151 177-235 (459)
180 cd01445 TST_Repeats Thiosulfat 50.1 44 0.00096 26.8 5.4 41 80-121 81-124 (138)
181 PRK03584 acetoacetyl-CoA synth 49.1 1.5E+02 0.0032 31.1 10.6 98 56-157 262-370 (655)
182 COG0318 CaiC Acyl-CoA syntheta 48.9 1.7E+02 0.0038 29.7 10.7 99 56-156 170-278 (534)
183 PRK07787 acyl-CoA synthetase; 48.8 1.7E+02 0.0037 29.0 10.6 96 56-157 127-231 (471)
184 PLN03052 acetate--CoA ligase; 48.3 1.1E+02 0.0024 32.6 9.5 98 56-157 355-460 (728)
185 PRK08633 2-acyl-glycerophospho 48.1 1.3E+02 0.0028 34.1 10.5 98 56-157 781-887 (1146)
186 KOG1179 Very long-chain acyl-C 47.7 72 0.0016 32.2 7.1 78 77-155 265-344 (649)
187 TIGR02275 DHB_AMP_lig 2,3-dihy 47.4 1.8E+02 0.0039 29.3 10.7 96 56-156 182-287 (527)
188 PRK10696 tRNA 2-thiocytidine b 46.8 1.9E+02 0.0041 26.1 9.5 77 72-148 5-93 (258)
189 TIGR01139 cysK cysteine syntha 46.2 1.6E+02 0.0035 27.2 9.3 61 90-151 51-112 (298)
190 PRK06839 acyl-CoA synthetase; 46.1 2.9E+02 0.0063 27.5 11.8 97 56-157 148-253 (496)
191 PLN02574 4-coumarate--CoA liga 45.9 2.2E+02 0.0047 29.1 11.0 101 56-157 197-307 (560)
192 PRK06164 acyl-CoA synthetase; 45.3 1.6E+02 0.0034 29.9 9.9 97 56-157 180-284 (540)
193 PLN02861 long-chain-fatty-acid 45.1 1.3E+02 0.0029 31.6 9.4 99 56-157 219-327 (660)
194 COG1022 FAA1 Long-chain acyl-C 44.8 1.7E+02 0.0036 30.4 9.6 97 56-157 190-294 (613)
195 PRK06814 acylglycerophosphoeth 43.1 1.9E+02 0.0041 32.8 10.8 97 56-156 792-897 (1140)
196 PRK13388 acyl-CoA synthetase; 42.9 2.9E+02 0.0063 28.1 11.3 95 56-155 149-252 (540)
197 PTZ00342 acyl-CoA synthetase; 42.8 2.1E+02 0.0046 30.6 10.5 101 211-316 91-208 (746)
198 TIGR01136 cysKM cysteine synth 42.5 2.4E+02 0.0052 26.1 9.8 59 92-151 55-113 (299)
199 PRK11761 cysM cysteine synthas 42.0 2.6E+02 0.0056 25.9 9.8 89 58-150 28-117 (296)
200 TIGR02372 4_coum_CoA_lig 4-cou 41.7 2.7E+02 0.0059 27.0 10.3 84 68-156 113-198 (386)
201 PLN03013 cysteine synthase 41.0 1.8E+02 0.0039 28.6 8.8 61 91-151 170-230 (429)
202 PRK10946 entE enterobactin syn 39.9 2.4E+02 0.0051 28.6 10.2 96 56-156 181-286 (536)
203 TIGR01734 D-ala-DACP-lig D-ala 39.8 3.3E+02 0.0072 27.1 11.2 84 68-155 159-245 (502)
204 PLN02556 cysteine synthase/L-3 39.8 1.8E+02 0.0039 28.0 8.6 60 91-150 106-165 (368)
205 PRK10252 entF enterobactin syn 39.7 2.3E+02 0.0049 32.7 10.9 96 56-155 597-702 (1296)
206 PF01436 NHL: NHL repeat; Int 39.6 65 0.0014 17.4 3.4 19 428-446 9-27 (28)
207 PLN02387 long-chain-fatty-acid 38.9 2.6E+02 0.0057 29.6 10.5 101 211-316 106-209 (696)
208 COG0365 Acs Acyl-coenzyme A sy 38.8 1.2E+02 0.0025 30.9 7.3 102 56-160 170-282 (528)
209 cd03466 Nitrogenase_NifN_2 Nit 38.7 2.2E+02 0.0047 28.1 9.2 56 94-150 299-358 (429)
210 PRK07788 acyl-CoA synthetase; 38.0 2E+02 0.0043 29.3 9.3 84 211-295 74-160 (549)
211 PRK06155 crotonobetaine/carnit 37.9 2.2E+02 0.0047 29.0 9.6 85 211-296 46-133 (542)
212 PF11142 DUF2917: Protein of u 37.7 1.3E+02 0.0028 20.4 5.2 23 416-438 36-58 (63)
213 PLN03102 acyl-activating enzym 37.6 1.6E+02 0.0036 30.2 8.6 81 211-292 39-122 (579)
214 PRK09162 hypoxanthine-guanine 37.6 1E+02 0.0022 26.2 5.9 47 67-115 14-60 (181)
215 TIGR03443 alpha_am_amid L-amin 37.6 2.7E+02 0.0058 32.5 11.1 97 56-156 414-520 (1389)
216 PRK09274 peptide synthase; Pro 37.1 2.7E+02 0.0059 28.2 10.2 79 210-289 40-121 (552)
217 PRK11658 UDP-4-amino-4-deoxy-L 36.1 1.5E+02 0.0032 28.6 7.6 63 80-147 59-126 (379)
218 PRK15407 lipopolysaccharide bi 36.0 1.6E+02 0.0035 29.1 7.9 56 90-149 106-166 (438)
219 TIGR00715 precor6x_red precorr 35.5 2.4E+02 0.0051 25.5 8.2 72 95-169 150-232 (256)
220 PRK05852 acyl-CoA synthetase; 35.5 4.5E+02 0.0097 26.5 11.4 86 68-157 194-282 (534)
221 PTZ00237 acetyl-CoA synthetase 35.2 1.8E+02 0.0038 30.6 8.5 79 210-289 91-172 (647)
222 PF01060 DUF290: Transthyretin 35.2 1.3E+02 0.0028 21.4 5.3 16 363-378 6-21 (80)
223 KOG0025 Zn2+-binding dehydroge 34.8 1.3E+02 0.0027 27.7 6.0 64 91-154 157-221 (354)
224 PRK08279 long-chain-acyl-CoA s 34.7 2.9E+02 0.0064 28.5 10.0 96 56-156 198-302 (600)
225 TIGR01138 cysM cysteine syntha 34.6 3.3E+02 0.0071 25.1 9.2 58 92-150 56-113 (290)
226 PLN02654 acetate-CoA ligase 34.6 2E+02 0.0044 30.2 8.9 99 56-157 274-384 (666)
227 TIGR03588 PseC UDP-4-keto-6-de 34.6 2E+02 0.0042 27.7 8.2 64 80-147 55-126 (380)
228 COG4009 Uncharacterized protei 34.5 82 0.0018 22.2 3.8 66 68-145 8-76 (88)
229 PLN02409 serine--glyoxylate am 34.3 3.1E+02 0.0068 26.6 9.5 75 74-149 39-114 (401)
230 PRK10717 cysteine synthase A; 33.9 2.7E+02 0.0059 26.2 8.8 58 92-150 61-118 (330)
231 TIGR03208 cyc_hxne_CoA_lg cycl 33.8 3.8E+02 0.0082 27.1 10.5 96 56-156 194-298 (538)
232 cd01449 TST_Repeat_2 Thiosulfa 33.7 72 0.0016 24.4 4.1 40 80-120 64-103 (118)
233 PF02350 Epimerase_2: UDP-N-ac 33.7 2.8E+02 0.0062 26.3 8.9 100 73-177 50-161 (346)
234 PRK05851 long-chain-fatty-acid 33.6 3.8E+02 0.0082 27.1 10.5 89 56-148 151-251 (525)
235 cd01519 RHOD_HSP67B2 Member of 33.3 95 0.0021 23.1 4.7 52 69-121 37-92 (106)
236 PRK06060 acyl-CoA synthetase; 33.2 3.5E+02 0.0075 28.7 10.4 98 56-156 144-250 (705)
237 TIGR01217 ac_ac_CoA_syn acetoa 32.8 1.8E+02 0.0038 30.6 8.0 67 90-156 301-370 (652)
238 PRK11070 ssDNA exonuclease Rec 32.8 4.2E+02 0.0091 27.3 10.3 94 69-169 49-160 (575)
239 PRK06087 short chain acyl-CoA 32.5 3.6E+02 0.0078 27.3 10.1 91 56-151 186-285 (547)
240 cd01561 CBS_like CBS_like: Thi 32.4 3.5E+02 0.0076 24.8 9.1 59 93-152 51-109 (291)
241 PRK13383 acyl-CoA synthetase; 31.9 2.7E+02 0.0058 28.0 9.1 84 211-295 60-146 (516)
242 COG0031 CysK Cysteine synthase 31.9 3.6E+02 0.0078 25.1 8.7 59 91-150 58-116 (300)
243 PF00464 SHMT: Serine hydroxym 31.8 5E+02 0.011 25.4 10.4 115 93-214 108-245 (399)
244 PRK08751 putative long-chain f 31.4 3.2E+02 0.0069 27.8 9.6 102 56-157 207-318 (560)
245 PRK06702 O-acetylhomoserine am 31.4 2.4E+02 0.0052 27.9 8.1 55 92-148 97-153 (432)
246 PRK05857 acyl-CoA synthetase; 31.3 3.2E+02 0.0069 27.7 9.5 80 210-290 40-122 (540)
247 TIGR01796 CM_mono_aroH monofun 30.8 72 0.0016 24.6 3.4 56 70-125 13-71 (117)
248 PRK06381 threonine synthase; V 30.7 1.6E+02 0.0034 27.6 6.6 89 58-153 32-120 (319)
249 COG2236 Predicted phosphoribos 30.5 87 0.0019 26.8 4.3 33 68-101 5-37 (192)
250 PLN00011 cysteine synthase 30.4 3.8E+02 0.0082 25.2 9.1 60 91-151 64-124 (323)
251 PF13580 SIS_2: SIS domain; PD 30.3 1.2E+02 0.0025 24.3 4.9 55 71-125 80-136 (138)
252 PF06543 Lac_bphage_repr: Lact 30.2 39 0.00085 21.1 1.5 22 310-331 22-43 (49)
253 PRK08180 feruloyl-CoA synthase 30.0 4E+02 0.0087 27.6 10.1 99 56-156 208-318 (614)
254 KOG1250 Threonine/serine dehyd 30.0 1.8E+02 0.0039 28.0 6.5 56 99-154 117-172 (457)
255 PRK05605 long-chain-fatty-acid 30.0 2.9E+02 0.0063 28.2 9.0 84 211-295 57-143 (573)
256 PF09269 DUF1967: Domain of un 29.7 57 0.0012 22.5 2.5 31 69-100 32-62 (69)
257 PRK07514 malonyl-CoA synthase; 29.5 2.8E+02 0.0061 27.6 8.7 84 210-294 27-113 (504)
258 cd01974 Nitrogenase_MoFe_beta 29.3 3.6E+02 0.0078 26.6 9.1 32 93-125 301-332 (435)
259 PRK11493 sseA 3-mercaptopyruva 29.2 72 0.0016 29.3 3.9 53 68-121 200-257 (281)
260 cd06451 AGAT_like Alanine-glyo 29.2 2.3E+02 0.0049 26.9 7.6 77 72-149 27-104 (356)
261 TIGR01137 cysta_beta cystathio 29.1 3.3E+02 0.0072 27.0 8.9 58 92-150 59-116 (454)
262 PRK07476 eutB threonine dehydr 29.0 3.4E+02 0.0073 25.5 8.5 54 100-153 71-124 (322)
263 PF02729 OTCace_N: Aspartate/o 29.0 3.1E+02 0.0067 22.1 7.7 78 73-151 15-103 (142)
264 cd02070 corrinoid_protein_B12- 28.9 3.8E+02 0.0082 23.1 10.7 109 215-327 64-183 (201)
265 PTZ00297 pantothenate kinase; 28.8 3.2E+02 0.007 31.9 9.5 83 68-156 619-703 (1452)
266 KOG1176 Acyl-CoA synthetase [L 28.1 2.3E+02 0.005 28.9 7.5 89 209-298 43-136 (537)
267 PRK08008 caiC putative crotono 28.1 3.2E+02 0.007 27.4 8.9 82 211-293 37-121 (517)
268 cd06448 L-Ser-dehyd Serine deh 27.9 1.6E+02 0.0034 27.6 6.0 90 58-151 17-106 (316)
269 PLN02330 4-coumarate--CoA liga 27.8 4.1E+02 0.0089 26.9 9.6 83 210-293 54-139 (546)
270 PRK02261 methylaspartate mutas 27.7 1.3E+02 0.0028 24.1 4.7 92 244-342 15-119 (137)
271 TIGR02618 tyr_phenol_ly tyrosi 27.7 4.5E+02 0.0097 26.1 9.1 47 90-141 105-166 (450)
272 PF03744 BioW: 6-carboxyhexano 27.5 86 0.0019 27.8 3.8 40 386-440 172-221 (239)
273 cd00615 Orn_deC_like Ornithine 27.3 2.8E+02 0.0061 25.5 7.6 55 92-149 96-161 (294)
274 PRK08276 long-chain-fatty-acid 27.2 3.7E+02 0.0079 26.8 9.1 84 211-295 11-97 (502)
275 PRK02261 methylaspartate mutas 26.8 3.3E+02 0.0072 21.8 7.6 44 107-150 19-62 (137)
276 PRK10524 prpE propionyl-CoA sy 26.8 3.7E+02 0.0081 27.9 9.2 99 56-157 232-342 (629)
277 PRK00174 acetyl-CoA synthetase 26.7 2.8E+02 0.0062 28.9 8.4 79 210-289 97-178 (637)
278 cd00640 Trp-synth-beta_II Tryp 26.6 2.4E+02 0.0053 25.0 6.9 58 94-152 49-106 (244)
279 TIGR02188 Ac_CoA_lig_AcsA acet 26.5 2.7E+02 0.0059 28.9 8.2 96 190-289 70-168 (625)
280 PRK15423 hypoxanthine phosphor 26.2 2.3E+02 0.005 23.9 6.1 44 69-113 8-52 (178)
281 PRK05850 acyl-CoA synthetase; 26.1 6.2E+02 0.013 25.9 10.6 84 210-295 34-123 (578)
282 PRK07798 acyl-CoA synthetase; 25.7 6.6E+02 0.014 25.1 10.7 84 211-295 28-114 (533)
283 KOG1138 Predicted cleavage and 25.7 79 0.0017 31.2 3.5 68 90-157 413-481 (653)
284 PF00818 Ice_nucleation: Ice n 25.6 31 0.00068 16.0 0.4 9 339-347 1-9 (16)
285 PRK07768 long-chain-fatty-acid 25.3 5.6E+02 0.012 25.9 10.1 91 56-150 151-254 (545)
286 PRK07786 long-chain-fatty-acid 25.3 6.4E+02 0.014 25.5 10.5 85 69-157 193-280 (542)
287 PRK08162 acyl-CoA synthetase; 25.2 3.1E+02 0.0067 27.7 8.2 84 211-295 43-129 (545)
288 PLN02723 3-mercaptopyruvate su 25.0 1E+02 0.0022 28.9 4.2 52 69-121 238-295 (320)
289 PRK12406 long-chain-fatty-acid 25.0 7E+02 0.015 24.9 11.2 66 90-156 191-257 (509)
290 COG4821 Uncharacterized protei 24.9 1.4E+02 0.0031 25.6 4.4 55 75-150 85-139 (243)
291 PRK00901 methylated-DNA--prote 24.8 1.7E+02 0.0037 24.1 4.9 22 67-88 88-115 (155)
292 TIGR01285 nifN nitrogenase mol 24.7 5.8E+02 0.013 25.2 9.5 73 94-167 310-398 (432)
293 TIGR03595 Obg_CgtA_exten Obg f 24.4 77 0.0017 21.9 2.4 21 80-101 43-63 (69)
294 PLN02430 long-chain-fatty-acid 24.4 7.6E+02 0.017 25.9 11.0 84 212-296 77-163 (660)
295 PRK15400 lysine decarboxylase 24.3 2.2E+02 0.0049 30.1 6.7 57 92-151 232-307 (714)
296 PRK12582 acyl-CoA synthetase; 24.1 3E+02 0.0066 28.6 7.9 77 211-288 80-164 (624)
297 PLN02238 hypoxanthine phosphor 23.9 2.2E+02 0.0048 24.3 5.7 44 68-113 10-53 (189)
298 PRK06382 threonine dehydratase 23.9 4.4E+02 0.0095 25.8 8.5 55 99-153 76-130 (406)
299 PRK05939 hypothetical protein; 23.7 3.7E+02 0.008 26.2 7.9 55 92-148 83-137 (397)
300 TIGR00936 ahcY adenosylhomocys 23.7 4E+02 0.0087 26.1 7.9 56 93-148 30-87 (406)
301 PRK09088 acyl-CoA synthetase; 23.6 6.5E+02 0.014 24.9 10.1 78 211-289 22-102 (488)
302 TIGR01286 nifK nitrogenase mol 23.6 5.7E+02 0.012 26.0 9.3 46 94-140 362-411 (515)
303 PRK04813 D-alanine--poly(phosp 23.3 7.3E+02 0.016 24.5 11.8 84 68-155 161-247 (503)
304 PRK12492 long-chain-fatty-acid 23.3 6.9E+02 0.015 25.4 10.3 100 56-156 206-321 (562)
305 PRK13382 acyl-CoA synthetase; 22.6 5.4E+02 0.012 26.0 9.3 81 211-292 68-151 (537)
306 PLN02356 phosphateglycerate ki 22.5 4.7E+02 0.01 25.8 8.2 56 93-149 102-157 (423)
307 PRK06145 acyl-CoA synthetase; 22.4 7.7E+02 0.017 24.4 11.1 97 56-157 148-253 (497)
308 PRK08638 threonine dehydratase 22.4 4.5E+02 0.0098 24.8 8.0 55 99-153 78-132 (333)
309 TIGR01203 HGPRTase hypoxanthin 22.2 2.7E+02 0.0059 23.1 5.8 20 70-89 3-22 (166)
310 PRK07059 Long-chain-fatty-acid 22.2 4.3E+02 0.0092 26.9 8.5 82 210-292 47-131 (557)
311 COG1064 AdhP Zn-dependent alco 22.1 2.6E+02 0.0056 26.5 6.1 61 85-150 158-218 (339)
312 cd01448 TST_Repeat_1 Thiosulfa 21.7 2.7E+02 0.0059 21.3 5.5 40 81-121 66-106 (122)
313 PRK05677 long-chain-fatty-acid 21.5 6.1E+02 0.013 25.8 9.5 99 56-156 206-314 (562)
314 PRK10287 thiosulfate:cyanide s 21.5 3.2E+02 0.007 20.6 5.6 48 68-123 41-88 (104)
315 PRK09331 Sep-tRNA:Cys-tRNA syn 21.4 4.7E+02 0.01 25.2 8.2 55 92-149 99-165 (387)
316 PLN02479 acetate-CoA ligase 20.9 5.8E+02 0.013 26.0 9.2 81 211-292 45-128 (567)
317 PF09312 SurA_N: SurA N-termin 20.9 2E+02 0.0043 22.2 4.5 30 57-88 2-31 (118)
318 PF03808 Glyco_tran_WecB: Glyc 20.6 1.8E+02 0.0038 24.4 4.4 76 259-340 5-81 (172)
319 PRK13391 acyl-CoA synthetase; 20.5 8.6E+02 0.019 24.3 10.7 95 191-293 11-108 (511)
320 PRK06178 acyl-CoA synthetase; 20.5 5.3E+02 0.012 26.2 8.8 85 211-296 58-145 (567)
321 PF07722 Peptidase_C26: Peptid 20.4 1.2E+02 0.0025 26.7 3.4 31 112-142 30-60 (217)
322 PF01297 TroA: Periplasmic sol 20.3 2.6E+02 0.0057 25.0 5.8 92 73-167 128-229 (256)
323 PRK05638 threonine synthase; V 20.2 3.2E+02 0.0068 27.1 6.7 90 58-154 81-170 (442)
324 PRK14807 histidinol-phosphate 20.2 6.2E+02 0.013 23.9 8.6 54 92-148 97-154 (351)
325 cd02067 B12-binding B12 bindin 20.1 3.6E+02 0.0079 20.6 5.9 38 113-150 21-58 (119)
326 PF10411 DsbC_N: Disulfide bon 20.0 1E+02 0.0022 20.3 2.2 19 422-440 32-50 (57)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-73 Score=554.05 Aligned_cols=410 Identities=39% Similarity=0.621 Sum_probs=357.4
Q ss_pred cEEEECCC-CceecHHHHHHHHHHHHHHhHHhcC--CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 012015 59 VALINSVT-GLRVSFSEFTRRTNSLASYLQNVTR--LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (473)
Q Consensus 59 ~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~~g--~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 135 (473)
+.+++... ++.+||+|+.+++.++|..|.+ +| +++||+|++++||+++++++++||+.+|+++.+++|.+++.++.
T Consensus 34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~ 112 (537)
T KOG1176|consen 34 TSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIA 112 (537)
T ss_pred ceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHH
Confidence 66666532 6999999999999999999997 65 88999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEccchHHHHhcC----CCeEEEEcCC----ChhhhhcccC--------CCccccccccCCCCEEEEEc
Q 012015 136 RQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSP----EFDSMTMSWN--------SKHELDRAKVCQSDVAAIMY 199 (473)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~ 199 (473)
+.++++++++++++....+++.+. ..+++++... .......... ..... ......++++.++|
T Consensus 113 ~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dd~~~il~ 191 (537)
T KOG1176|consen 113 KQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDG-IRPVSEDDTAAILY 191 (537)
T ss_pred HHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcc-cccCCCCCeEEEec
Confidence 999999999999999988877532 2455555432 1111111000 00011 34455699999999
Q ss_pred cCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHH-HhhhcCeEEEecCCCHHHHHHHHH
Q 012015 200 SSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR-AAALMETAVVMQRFDLKMMLKAVE 278 (473)
Q Consensus 200 TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~-~l~~G~~~v~~~~~~~~~~~~~i~ 278 (473)
||||||.||||.+||+++..+........ .....++.++.+|++|++|+...+. .+..|++++..+.|+++.+++.|+
T Consensus 192 SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~ 270 (537)
T KOG1176|consen 192 SSGTTGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIE 270 (537)
T ss_pred CCCCCCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHH
Confidence 99999999999999999998877655555 5666999999999999999977777 455555555566789999999999
Q ss_pred HcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCC
Q 012015 279 EFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (473)
Q Consensus 279 ~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 358 (473)
+|++|+++++|+++..|++.+.....+++++|.+.+||+++++++.+++++.+|...+.+.||+||+|+.++.+...++
T Consensus 271 kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e- 349 (537)
T KOG1176|consen 271 KYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE- 349 (537)
T ss_pred HhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-
Confidence 9999999999999999999987778899999999999999999999999999977999999999999977776555444
Q ss_pred CCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEe
Q 012015 359 RRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVD 438 (473)
Q Consensus 359 ~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~G 438 (473)
.+.+++|+++++++..+.+ ++|+.+++++.||||++|+.++.||++||+.|++.|+.+|||+|||+|+.|+||+|+|++
T Consensus 350 ~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~Ivd 428 (537)
T KOG1176|consen 350 RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVD 428 (537)
T ss_pred CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEec
Confidence 6789999999999999888 899999999999999999999999999999999999888999999999999999999999
Q ss_pred ccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 439 RLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 439 R~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|.+|+||.+|++|+|.|||++|.+||.|.||||||
T Consensus 429 R~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvg 463 (537)
T KOG1176|consen 429 RSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVG 463 (537)
T ss_pred chhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEc
Confidence 99999999999999999999999999999999997
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.4e-71 Score=535.13 Aligned_cols=425 Identities=25% Similarity=0.375 Sum_probs=358.6
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~l 113 (473)
.+|+.....++..... .+|+.|+++.++ .+++||+||.+.++++|+.|++..|+ +||+|+|++|+.+++++++|
T Consensus 7 ~lN~~~n~~dr~~~~~--~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~L 83 (528)
T COG0365 7 TLNLALNALDRHLEAD--RPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALL 83 (528)
T ss_pred eeechhhhhhhhhhcc--CCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHH
Confidence 3566555333332210 168899988633 27899999999999999999875678 99999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCC---------eEEEEcC--CChhhhhcccCCCc
Q 012015 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH---------RTILIDS--PEFDSMTMSWNSKH 182 (473)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~ 182 (473)
||+++||+.+|+.+.++++.+++++++++++++|+.+....+.+.... .+++++. ..|.+.......
T Consensus 84 A~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~-- 161 (528)
T COG0365 84 ATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASE-- 161 (528)
T ss_pred HHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCC--
Confidence 999999999999999999999999999999999998776654332111 1333322 334444433221
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCe
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~ 261 (473)
..+......+++++++|||||||+||+|+++|+.++..............++|++++..+..|++|. +.++.+|..|++
T Consensus 162 ~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat 241 (528)
T COG0365 162 KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGAT 241 (528)
T ss_pred CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCe
Confidence 2223347889999999999999999999999998887776666544466799999999999999999 669999999999
Q ss_pred EEEecC--C-CHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 262 AVVMQR--F-DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 262 ~v~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
.++.+. + +++.+++.|+++++|.++.+|+.++.|++.....+.++++||.+.++|||++++.++++.+.+ ++++.+
T Consensus 242 ~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d 320 (528)
T COG0365 242 TVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILD 320 (528)
T ss_pred EEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEec
Confidence 999853 3 489999999999999999999999999998766778899999999999999999999999999 799999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecC--ccccccCCCccccccccCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP--TIMKGYVGEPEVTSATLLP 416 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~ 416 (473)
.||+||+|.+...... ..+.++.|+|+||+++.++|.+ |+++++|+ |+|+++.+ +++++|+++++.+.+.+..
T Consensus 321 ~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~ 395 (528)
T COG0365 321 IYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFG 395 (528)
T ss_pred cccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhh
Confidence 9999999965544322 3345556999999999999954 99999999 99999986 8899999999999998865
Q ss_pred CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 417 DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 417 ~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
. ||.|||.+++|+||++||+||.||+||+.|+||.+.|||++|.+||.|.||+|||
T Consensus 396 ~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg 451 (528)
T COG0365 396 R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVG 451 (528)
T ss_pred c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEe
Confidence 4 9999999999999999999999999999999999999999999999999999997
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-70 Score=496.54 Aligned_cols=429 Identities=29% Similarity=0.366 Sum_probs=377.3
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.|+.+.+.-.++.- ||+.|.++...+.++||+|+.+.++++|.+|.+ +|+++||+|++..||+.+|+..++||.+
T Consensus 50 ~Tigq~l~~~t~~v----~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 50 ETIGQLLETTTERV----PDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred ccHHHHHHHHhhcc----CcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 69999999999999 999999998888899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-----HHHhcC------------------CCe-EEEEcCC----
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------------------KHR-TILIDSP---- 169 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------------------~~~-~~~~~~~---- 169 (473)
+|.+.+++||.++..++++.|++.+.+++|+.+.+. +.+.++ ..+ ++..+..
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~ 204 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP 204 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC
Confidence 999999999999999999999999999999875422 222211 111 2222211
Q ss_pred ---ChhhhhcccCCCc----cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecC
Q 012015 170 ---EFDSMTMSWNSKH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (473)
Q Consensus 170 ---~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~p 242 (473)
.+++++....... ........+++++.|.|||||||.|||+.+||-+++++.......+ ++.+++++++..|
T Consensus 205 Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~-g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 205 GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA-GYNEKHRICIPNP 283 (596)
T ss_pred CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh-CcCcceEEEecCc
Confidence 1344433322210 1112345679999999999999999999999999999998888887 7888899999999
Q ss_pred hhhHHhH-HHHHHHhhhcCeEEEe-cCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012015 243 YFHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (473)
Q Consensus 243 l~~~~g~-~~~l~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~ 320 (473)
++|.+|. ..++.++..|++++++ +.|++...++.|.++++|+++++|+++..|++.+...+.+++++|..+.||+++|
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 9999996 8899999999999996 5799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCeEEeecCCcccccccccccCC-CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCcc
Q 012015 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (473)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 399 (473)
+++.+.+.+...-..+...||+||++...+..... .......++|+..++.+..|+| +.|..++-|..|||+++|.+.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~t 442 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYST 442 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechh
Confidence 99999999987434688899999999877764432 2334457999999999999999 899999999999999999999
Q ss_pred ccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 400 MKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.|||++++.|.++...|.||+|||++.+|++|+++++||.+|+|+.+|++|+|.|||+.|.+||.|.++.|||
T Consensus 443 Ml~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVG 516 (596)
T KOG1177|consen 443 MLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVG 516 (596)
T ss_pred heeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.2e-69 Score=540.29 Aligned_cols=431 Identities=34% Similarity=0.526 Sum_probs=366.4
Q ss_pred CCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
...++.+++.+.++.+ |+++|+++.....++||+||.++++++|.+|++ .|+++||+|+|+++|++++++++|||
T Consensus 9 ~~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~ 83 (534)
T COG0318 9 AELTLASLLERAARRN----PDRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAA 83 (534)
T ss_pred ccccHHHHHHHHHHhC----CCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3479999999999999 999999998333349999999999999999999 88999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC-----CeEEE-EcCC------ChhhhhcccCCCcc
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTIL-IDSP------EFDSMTMSWNSKHE 183 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~-~~~~------~~~~~~~~~~~~~~ 183 (473)
+++|++++|++|.++..++.++++.+++++++++....+...... ...+. .... .++......... .
T Consensus 84 ~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 162 (534)
T COG0318 84 LRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGP-D 162 (534)
T ss_pred HhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCc-c
Confidence 999999999999999999999999999999999987433333211 11111 1111 223332211111 1
Q ss_pred ccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC-CCCCcEEEEecChhhHHhHHH-HHHHhhhcCe
Q 012015 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGLFF-CFRAAALMET 261 (473)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~g~~~-~l~~l~~G~~ 261 (473)
.......++++++++|||||||.||||++||+++..+.......+.. ....+++++++|++|.+|+.. ++.++..|++
T Consensus 163 ~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~ 242 (534)
T COG0318 163 ADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGT 242 (534)
T ss_pred cccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCE
Confidence 11122568999999999999999999999999999988877777622 788999999999999999954 5555899999
Q ss_pred EEEec--CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCC-ceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 262 AVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS-LETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 262 ~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~-lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
+++.+ .|++..++..+.++++|++.++|+++..+++.......++.+ +|.+++||+++++++.+++++.|+...+.+
T Consensus 243 ~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~ 322 (534)
T COG0318 243 LVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILE 322 (534)
T ss_pred EEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEE
Confidence 99987 599999999999999999999999999999988777666665 999999999999999999999996578999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 418 (473)
.||+||++.+++...........+++|+|+|+++++|+|++++.+++ |+.|||+|+||+++.||+++|+.|.+.|..+|
T Consensus 323 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~g 401 (534)
T COG0318 323 GYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDG 401 (534)
T ss_pred eecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCC
Confidence 99999999877664432201355778999999999999976665666 99999999999999999999999999886569
Q ss_pred eeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 419 ~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+|||+|++|+||+++|.||.+|+|+.+|++|+|.|||.++.+||.|.+|+|+|
T Consensus 402 W~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvg 456 (534)
T COG0318 402 WLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVG 456 (534)
T ss_pred eeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEe
Confidence 9999999999999999999999999999999999999999999999999999986
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.5e-69 Score=555.58 Aligned_cols=426 Identities=23% Similarity=0.309 Sum_probs=347.7
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC----C-CC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS----V-TG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~----~-~~--~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
.|+.+++.+.++++ ||++|+... . .+ .++||+||.++++++|++|++ +|+++||+|+|+++|++++++
T Consensus 45 ~t~~~~l~~~a~~~----pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~ 119 (666)
T PLN02614 45 DSCWDVFRMSVEKY----PNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWII 119 (666)
T ss_pred CcHHHHHHHHHHhC----CCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 59999999999999 999999742 1 12 358999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-C-----C-eEEEEcCC--------------
Q 012015 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-K-----H-RTILIDSP-------------- 169 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~-----~-~~~~~~~~-------------- 169 (473)
++|||+++|+++||+++.++.+++.++++++++++++++.+....+... . . .++.++..
T Consensus 120 ~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~ 199 (666)
T PLN02614 120 SMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLV 199 (666)
T ss_pred HHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcE
Confidence 9999999999999999999999999999999999999987665544211 0 1 23333321
Q ss_pred --ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC----CCCCCCcEEEEecCh
Q 012015 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPY 243 (473)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~----~~~~~~~~~l~~~pl 243 (473)
.++++....... ........++++++|+|||||||.||||++||++++..+......+ .....++++++.+|+
T Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 200 IYAWDEFLKLGEGK-QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEHHHHHhhcccC-CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 122222111100 1111234578999999999999999999999999998776544332 135788999999999
Q ss_pred hhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC----------------------
Q 012015 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST---------------------- 301 (473)
Q Consensus 244 ~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 301 (473)
+|++++...+.++..|+++++.+ +++..+++.|+++++|+++++|+++..+......
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999865667788999998875 5899999999999999999999999987642100
Q ss_pred ---------CCC-------------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCC
Q 012015 302 ---------DGY-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (473)
Q Consensus 302 ---------~~~-------------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 358 (473)
... .+ +++|.+++||+++++++ +++.+.++++.+++.||+||++...+.... ...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~-~~~ 435 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLP-DEL 435 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeecc-ccC
Confidence 000 01 58999999999999875 566676656899999999999765443222 222
Q ss_pred CCCCCccccCCCcEEEEEcC-C-CCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEE
Q 012015 359 RRWGSTGRLSAGLEAKIVDP-E-TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (473)
Q Consensus 359 ~~~~~~G~p~~~~~~~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~ 436 (473)
...+++|+|+|+++++|+|. + .+.++++|+.|||+|+|++++.||+++|+.|.+.| .+|||+|||+|++|+||+|+|
T Consensus 436 ~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 514 (666)
T PLN02614 436 DMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMKI 514 (666)
T ss_pred CcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCCEEE
Confidence 34689999999999999983 2 34688899999999999999999999999999998 589999999999999999999
Q ss_pred EeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 437 VDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 437 ~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+||+||+||+ +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 515 ~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g 552 (666)
T PLN02614 515 IDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYG 552 (666)
T ss_pred EEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEe
Confidence 9999999997 799999999999999999999999987
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-69 Score=552.10 Aligned_cols=450 Identities=20% Similarity=0.233 Sum_probs=363.8
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECCCC---ceecHHHHHHHHHHHHHHhHHh--
Q 012015 15 FNSATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTG---LRVSFSEFTRRTNSLASYLQNV-- 89 (473)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~~-- 89 (473)
.+.....|+........+. ....|+.++|.+.++++ |+++|+++...+ +++||+||.++++++|++|.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~----p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~ 113 (746)
T PTZ00342 39 NENESSVYCMKDHKKKSSL-YVYKHIMKLLLEKYKLN----NNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEG 113 (746)
T ss_pred CCCCCCceecCchhhcccc-cccchHHHHHHHHHhhc----CCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhh
Confidence 3334445655554444333 33469999999999999 999999874223 6899999999999999999972
Q ss_pred cCCCCC-----------CEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc
Q 012015 90 TRLSKN-----------DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK 158 (473)
Q Consensus 90 ~g~~~g-----------d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 158 (473)
+|+++| |+|+|+++|+++|+++.+||+++|++.||+++.++.+++.++++++++++++++.+..+.+.+
T Consensus 114 ~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 114 KGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred cCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 499998 999999999999999999999999999999999999999999999999999998877666542
Q ss_pred C-----CC-eEEEEcCCChh--------------------------------------------------------hhhc
Q 012015 159 L-----KH-RTILIDSPEFD--------------------------------------------------------SMTM 176 (473)
Q Consensus 159 ~-----~~-~~~~~~~~~~~--------------------------------------------------------~~~~ 176 (473)
. .. .+++++..... ++..
T Consensus 194 ~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (746)
T PTZ00342 194 RKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKE 273 (746)
T ss_pred hhccCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 1 11 24444431100 0000
Q ss_pred ccC---------------CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC-CCCCCcEEEEe
Q 012015 177 SWN---------------SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFT 240 (473)
Q Consensus 177 ~~~---------------~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~-~~~~~~~~l~~ 240 (473)
... ...........++++++|+|||||||.||||++||+++++.+........ .....++.++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~ 353 (746)
T PTZ00342 274 KAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSY 353 (746)
T ss_pred HhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEe
Confidence 000 00000112345789999999999999999999999999988765543211 12345899999
Q ss_pred cChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcC--------CCCCC---------
Q 012015 241 MPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKG--------GSTDG--------- 303 (473)
Q Consensus 241 ~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~--------- 303 (473)
+|++|++++...+.++..|+++++.+. ++..+++.|+++++|+++++|.++.++... .....
T Consensus 354 LPL~Hi~~~~~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~ 432 (746)
T PTZ00342 354 LPISHIYERVIAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSL 432 (746)
T ss_pred CcHHHHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 999999999777888999999998865 899999999999999999999999988652 10000
Q ss_pred -------------------------CCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCC
Q 012015 304 -------------------------YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (473)
Q Consensus 304 -------------------------~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 358 (473)
...+++|.+++||+++++++.++|+..+ ++++.+.||+||+++.++.... ..
T Consensus 433 ~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~--~~ 509 (746)
T PTZ00342 433 RKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHA--DD 509 (746)
T ss_pred HHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccC--CC
Confidence 0026899999999999999999999888 8999999999999876654322 23
Q ss_pred CCCCCccccC-CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEE
Q 012015 359 RRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (473)
Q Consensus 359 ~~~~~~G~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~ 437 (473)
...+++|+|+ |+++++|+|.+++...+.+..|||+++|+.++.||+++|+.|++.|+.||||+|||+|++|+||+|+|+
T Consensus 510 ~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~ 589 (746)
T PTZ00342 510 NNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFL 589 (746)
T ss_pred CCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEE
Confidence 4568999998 999999998655555555567999999999999999999999999988999999999999999999999
Q ss_pred eccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 438 DRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 438 GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||++|+||+ +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 590 gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG 626 (746)
T PTZ00342 590 DRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYG 626 (746)
T ss_pred ccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEc
Confidence 999999997 799999999999999999999999987
No 7
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=7.1e-68 Score=538.28 Aligned_cols=459 Identities=41% Similarity=0.659 Sum_probs=382.8
Q ss_pred CCCCCCCCCCCCCceecCCCCCCCCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHh
Q 012015 7 QLFDTKSGFNSATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYL 86 (473)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 86 (473)
+-+++.+.+.+..+.|.++.+..++|. +..+++.+.+++. +.+ |+++|+++..++.++||+||.++++++|+.|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L 83 (560)
T PLN02574 10 SHNNPPFWYSPETGIYSSKHPPVPLPS-DPNLDAVSFIFSH-HNH----NGDTALIDSSTGFSISYSELQPLVKSMAAGL 83 (560)
T ss_pred CCCCCccccCcCCeeecCCCCCCCCCC-CCCCCHHHHHhcC-ccc----CCCCEEEECCCCCcccHHHHHHHHHHHHHHH
Confidence 445566667777788887765545444 3346777777765 556 9999999875566899999999999999999
Q ss_pred HHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEE
Q 012015 87 QNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILI 166 (473)
Q Consensus 87 ~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 166 (473)
.++.|+++||+|+++++|+.++++++|||+++|++++|++|.++.+++.++++.+++++++++.+....+......++.+
T Consensus 84 ~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (560)
T PLN02574 84 YHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGV 163 (560)
T ss_pred HHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEec
Confidence 96479999999999999999999999999999999999999999999999999999999999988777665544444433
Q ss_pred cC-----------CChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc----cCCCC
Q 012015 167 DS-----------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPKR 231 (473)
Q Consensus 167 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~----~~~~~ 231 (473)
+. ..+..+...... ........++++++++|||||||.||+|.++|+++...+..... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~ 241 (560)
T PLN02574 164 PENYDFDSKRIEFPKFYELIKEDFD--FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYP 241 (560)
T ss_pred CcccccccCccCcccHHHHhhcCCc--ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccC
Confidence 21 112222211110 11122345688999999999999999999999999887765432 11122
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC-CCCCCCCc
Q 012015 232 VSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-DGYDLSSL 309 (473)
Q Consensus 232 ~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~~l 309 (473)
..+++++..+|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.... ...+++++
T Consensus 242 ~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l 321 (560)
T PLN02574 242 GSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSL 321 (560)
T ss_pred CCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccc
Confidence 356888999999999998 5567788899999999999999999999999999999999999999887543 34568899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCc
Q 012015 310 ETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (473)
Q Consensus 310 r~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~ 389 (473)
|.+++||+++++++.+++.+.++++.+++.||+||++.+.+...........+++|+|+++++++|+|++++++++.|+.
T Consensus 322 r~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~ 401 (560)
T PLN02574 322 KQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC 401 (560)
T ss_pred eEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC
Confidence 99999999999999999999998899999999999986654322222334567999999999999999888999999999
Q ss_pred cEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceE
Q 012015 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (473)
Q Consensus 390 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (473)
|||+|+|+.++.||+++++.+.+.|+.+|||+|||+|++|+||+++++||.||+||++|++|++.|||++|.+||.|.|+
T Consensus 402 Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~ 481 (560)
T PLN02574 402 GELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDA 481 (560)
T ss_pred eEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceE
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q 012015 470 AVIP 473 (473)
Q Consensus 470 ~vvg 473 (473)
+|+|
T Consensus 482 ~v~~ 485 (560)
T PLN02574 482 AVTA 485 (560)
T ss_pred EEEc
Confidence 9985
No 8
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.6e-67 Score=541.08 Aligned_cols=425 Identities=23% Similarity=0.321 Sum_probs=344.9
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC-----CCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
.|+.+++.+.++++ |+++|+... ..+ +++||+||.++++++|++|.+ +|+++||+|+|+++|+++|++
T Consensus 43 ~t~~~~l~~~~~~~----p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~ 117 (660)
T PLN02861 43 DSPWQFFSDAVKKY----PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWII 117 (660)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58999999999999 999999641 112 579999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC------CCe-EEEEcCC--------------
Q 012015 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHR-TILIDSP-------------- 169 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~-------------- 169 (473)
+++||+++|+++||+++.++.+++.+++++++++++|++.+....+... ..+ ++.++..
T Consensus 118 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02861 118 AMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVS 197 (660)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcE
Confidence 9999999999999999999999999999999999999987665544321 122 3333321
Q ss_pred --ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC----CCCCCcEEEEecCh
Q 012015 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPY 243 (473)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~----~~~~~~~~l~~~pl 243 (473)
+++++...... ........++++++|+|||||||.||||++||++++.........+. ....++++++.+|+
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 275 (660)
T PLN02861 198 CFSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPL 275 (660)
T ss_pred EEEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcH
Confidence 12222211110 11122345789999999999999999999999999988766544331 14678999999999
Q ss_pred hhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCC------------------------
Q 012015 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG------------------------ 299 (473)
Q Consensus 244 ~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------ 299 (473)
+|++++...+.++..|+++++. .+++..+++.|+++++|+++++|+++..+.+..
T Consensus 276 ~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 276 AHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999986566789999999887 468999999999999999999999999886410
Q ss_pred -------------CCCCC-------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCC
Q 012015 300 -------------STDGY-------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (473)
Q Consensus 300 -------------~~~~~-------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 358 (473)
..... .+ .++|.+++||+++++++. +|.+.++...+++.||+||+++.++.... ...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~-~~~ 432 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIA-NVF 432 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccc-ccC
Confidence 00000 11 479999999999999975 56666644579999999999876554322 122
Q ss_pred CCCCCccccCCCcEEEEEcC-CCC-CCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEE
Q 012015 359 RRWGSTGRLSAGLEAKIVDP-ETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (473)
Q Consensus 359 ~~~~~~G~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~ 436 (473)
...+++|+|+++++++|+|. +.| ..++++..|||+|+|+.++.||+++|+.|.+.| .+|||+|||+|++|+||+|+|
T Consensus 433 ~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 511 (660)
T PLN02861 433 SMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMKI 511 (660)
T ss_pred CCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcEEE
Confidence 24579999999999999983 333 344566789999999999999999999999999 589999999999999999999
Q ss_pred EeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 437 VDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 437 ~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+||+||+||+ +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 512 ~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G 549 (660)
T PLN02861 512 IDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYG 549 (660)
T ss_pred EeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEe
Confidence 9999999997 799999999999999999999999986
No 9
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.3e-67 Score=539.21 Aligned_cols=428 Identities=23% Similarity=0.269 Sum_probs=354.2
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEE---CC--C--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALIN---SV--T--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~---~~--~--~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~ 107 (473)
....++.+++.+.++.+ ||++|+.. .. . .+.+||+||.++++++|++|++ +|+++||+|+|+++|+++
T Consensus 41 ~~~~tl~~~l~~~a~~~----p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e 115 (651)
T PLN02736 41 PEIGTLHDNFVYAVETF----RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPE 115 (651)
T ss_pred CCCCCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHH
Confidence 34468999999999999 99999842 11 1 2569999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCe-EEEEcCC------------
Q 012015 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP------------ 169 (473)
Q Consensus 108 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~------------ 169 (473)
++++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++.++..
T Consensus 116 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~ 195 (651)
T PLN02736 116 WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTG 195 (651)
T ss_pred HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCC
Confidence 9999999999999999999999999999999999999999998766554321 112 2323211
Q ss_pred ----ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhh
Q 012015 170 ----EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFH 245 (473)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 245 (473)
.++++....... ........++++++|+|||||||.||||++||+++...+......+ ...+++++++.+|++|
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 196 VEIVTYSKLLAQGRSS-PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPSDVHISYLPLAH 273 (651)
T ss_pred cEEEEHHHHHHhcccC-CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCCCEEEEeCCHHH
Confidence 122222211101 1112234578999999999999999999999999998888777666 6788999999999999
Q ss_pred HHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC-------------------------
Q 012015 246 IYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS------------------------- 300 (473)
Q Consensus 246 ~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------- 300 (473)
.+++...+.++..|+++++.+. ++..+++.|+++++|+++++|+++..+.+...
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999888889999999988764 78899999999999999999999988765310
Q ss_pred ----CCC------------CCC-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCC
Q 012015 301 ----TDG------------YDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (473)
Q Consensus 301 ----~~~------------~~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (473)
... ..+ +++|.+++||+++++++.+++++.+ ++++++.||+||+++.++... ......++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~--~~~~~~~~ 429 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMD--EGDNLSGH 429 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccC--CCCCCCCc
Confidence 000 011 4899999999999999999999888 788999999999987655432 22235679
Q ss_pred ccccCCCcEEEEEcCCCCC---CCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEecc
Q 012015 364 TGRLSAGLEAKIVDPETGD---SLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL 440 (473)
Q Consensus 364 ~G~p~~~~~~~i~d~~~~~---~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~ 440 (473)
+|+|+|+++++|+|.+++. ...++..|||+|+|++++.||+++++.|.+.|+.+|||+|||+|++|+||+|+|+||.
T Consensus 430 vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~ 509 (651)
T PLN02736 430 VGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRK 509 (651)
T ss_pred cCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEec
Confidence 9999999999999843332 2233457999999999999999999999999988999999999999999999999999
Q ss_pred CCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 441 KDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 441 ~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+||+ +|++|+|.+||.+|.+||.|.+|+|+|
T Consensus 510 kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g 543 (651)
T PLN02736 510 KNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYG 543 (651)
T ss_pred hhheEcCCCcEechHHHHHHHhcCCCeeEEEEEe
Confidence 999998 799999999999999999999999986
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.9e-66 Score=524.35 Aligned_cols=425 Identities=22% Similarity=0.257 Sum_probs=357.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.|.+.++++ |+++|+++.. ++++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||++
T Consensus 19 ~~~~~~~~~~~~~~----p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCSEM----TTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 58999999999999 9999998762 3689999999999999999987 4899999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC-------CeEEEEcCC----Chhhhhccc----CCCc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-------HRTILIDSP----EFDSMTMSW----NSKH 182 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~----~~~~ 182 (473)
+|++++|+++.++.+++.++++.+++++++++.+....+.+.. ..++.++.. .+....... ....
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFE 169 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCch
Confidence 9999999999999999999999999999999987766554321 123333221 000100000 0000
Q ss_pred ----cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhh
Q 012015 183 ----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAA 257 (473)
Q Consensus 183 ----~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~ 257 (473)
........++++++++|||||||.||+|.++|+++..........+ ....++++++.+|++|.+++ ..++.++.
T Consensus 170 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 248 (539)
T PRK06334 170 WLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-SPKEDDVMMSFLPPFHAYGFNSCTLFPLL 248 (539)
T ss_pred hhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-CCCCCceEEEecchHhhhhhHHHHHHHHH
Confidence 0011234568999999999999999999999999998877666555 67789999999999999998 45788999
Q ss_pred hcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeE
Q 012015 258 LMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (473)
Q Consensus 258 ~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~ 336 (473)
.|+++++.. .+++..+++.|+++++|++.++|+++..|++........++++|.+++||+++++++.+++.+.++++.+
T Consensus 249 ~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 249 SGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 999998875 5899999999999999999999999999988765555678999999999999999999999999988999
Q ss_pred EeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCcccccccc-C
Q 012015 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATL-L 415 (473)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~ 415 (473)
++.||+||++.++..... ......+++|+|+++++++|+|++++.++++|+.|||+|+|+.++.||+++++.+.... .
T Consensus 329 ~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~ 407 (539)
T PRK06334 329 RQGYGTTECSPVITINTV-NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELG 407 (539)
T ss_pred EecccccccCceEEeccC-CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeC
Confidence 999999999876654322 22223468999999999999997778999999999999999999999999998765332 3
Q ss_pred CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcce------EEEcC
Q 012015 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD------AAVIP 473 (473)
Q Consensus 416 ~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~------~~vvg 473 (473)
.++||+|||+|++|++|++++.||.||+||++|++|+|.|||++|.+||+|.+ ++|+|
T Consensus 408 ~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~ 471 (539)
T PRK06334 408 GETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCG 471 (539)
T ss_pred CceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEc
Confidence 46899999999999999999999999999999999999999999999999988 66654
No 11
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.9e-66 Score=507.66 Aligned_cols=415 Identities=30% Similarity=0.422 Sum_probs=343.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
.++..++.++++.+ |+.+|+..... .+.+||+|+.+++.++|++|++ .|+..||+|+|++.|+++|+++.+||
T Consensus 16 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~ 90 (613)
T COG1022 16 HTLPKRLAERVKDR----PDGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAI 90 (613)
T ss_pred ccHHHHHHHHhhcC----CcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 58999999999999 88888876533 4899999999999999999999 99977999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-HHHhcCCCe---E---E-EEc---------CCChhhhhccc
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-HKLAKLKHR---T---I-LID---------SPEFDSMTMSW 178 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-~~~~~~~~~---~---~-~~~---------~~~~~~~~~~~ 178 (473)
+.+|++.||+.+++++++++++|+++++++++++.... +.+...... + + ..+ ...++......
T Consensus 91 ~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (613)
T COG1022 91 LALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEG 170 (613)
T ss_pred HHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccccc
Confidence 99999999999999999999999999999999987433 332211110 0 0 000 00000000000
Q ss_pred -------CCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHH
Q 012015 179 -------NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF 251 (473)
Q Consensus 179 -------~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 251 (473)
............++|+|.|+|||||||.||||++||+|+++++.......+...++|+.++.+|+.|++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 171 ISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred chhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHH
Confidence 0000111235678999999999999999999999999999999999888733889999999999999999865
Q ss_pred HHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC----CCC------------------------
Q 012015 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TDG------------------------ 303 (473)
Q Consensus 252 ~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~------------------------ 303 (473)
. ..+..++........++..+++.+.+.+||+++++|.+|+.+-+... +..
T Consensus 251 ~-~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~ 329 (613)
T COG1022 251 E-GGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLG 329 (613)
T ss_pred H-HHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3 33333344444445578999999999999999999999887653211 000
Q ss_pred -------------------CCC-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCC
Q 012015 304 -------------------YDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (473)
Q Consensus 304 -------------------~~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (473)
..+ .++|.+++||+++++++...++.. ++++.++||+||+++.++.+ ++.....++
T Consensus 330 ~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~--~~~~~~~gt 405 (613)
T COG1022 330 GGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN--PPDRFVLGT 405 (613)
T ss_pred cCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc--cccCcccCC
Confidence 011 378999999999999999999998 89999999999999888774 345567789
Q ss_pred ccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCe
Q 012015 364 TGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (473)
Q Consensus 364 ~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~ 443 (473)
+|.|+|+++++|.| .|||+|+|+.+++|||++|+.|.+.|+.||||+|||+|.+|++|+|+++||++|.
T Consensus 406 vG~p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~ 474 (613)
T COG1022 406 VGKPLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKEL 474 (613)
T ss_pred cCCcCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccce
Confidence 99999999999999 4999999999999999999999999999999999999999999999999999999
Q ss_pred EEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 444 IKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 444 i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||. +|++|.|..||..+.++|.|.+.+|+|
T Consensus 475 i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg 505 (613)
T COG1022 475 IKLSNGKNIAPEPIESKLAKSPLIEQICVVG 505 (613)
T ss_pred EECCCCcccChHHHHHHHhcCCCeeEEEEEe
Confidence 999 999999999999999999999999986
No 12
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-65 Score=527.82 Aligned_cols=430 Identities=22% Similarity=0.280 Sum_probs=346.7
Q ss_pred CCCCCHHHHhcccc-cC--CCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc
Q 012015 35 DAPISAVDYVSSLR-AT--LPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (473)
Q Consensus 35 ~~~~~l~~~~~~~~-~~--~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~ 107 (473)
+..+|....+.++. .. + ||++|+++... .+++||+||.++++++|+.|++ +|+++||+|+++++|+++
T Consensus 55 ~~~~n~~~~~l~~~~~~~~~----~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~~e 129 (647)
T PTZ00237 55 GGELNTCYNVLDIHVKNPLK----RDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANTLE 129 (647)
T ss_pred CCeeeHHHHHHHHhhcccCC----CCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHH
Confidence 56677766665543 22 5 89999987421 3689999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc---------hHHHHh---cC---C-CeEEEEcC---
Q 012015 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS---------VVHKLA---KL---K-HRTILIDS--- 168 (473)
Q Consensus 108 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~---~~---~-~~~~~~~~--- 168 (473)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+. .. . ..++.+..
T Consensus 130 ~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 209 (647)
T PTZ00237 130 PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDI 209 (647)
T ss_pred HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCc
Confidence 99999999999999999999999999999999999999999752 111111 10 1 12332210
Q ss_pred ------------------CChhhhhccc---CCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHH-HHHHHHHhhc
Q 012015 169 ------------------PEFDSMTMSW---NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRN-LTAAVASSFA 226 (473)
Q Consensus 169 ------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~-l~~~~~~~~~ 226 (473)
..+++++... .............+++++|+|||||||.||||+++|++ +.........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 210 TSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 0122221110 00001112334678999999999999999999999998 4443322222
Q ss_pred cCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC--CC----HHHHHHHHHHcccceEEecHHHHHHHhcCCC
Q 012015 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FD----LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS 300 (473)
Q Consensus 227 ~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 300 (473)
.. ....++++++..|++|+.+...++.++..|+++++.+. +. +..+++.|+++++|+++++|++++.|++...
T Consensus 290 ~~-~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 368 (647)
T PTZ00237 290 II-EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDP 368 (647)
T ss_pred hc-CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCc
Confidence 33 56678999999999998766678899999999998764 22 6889999999999999999999999987532
Q ss_pred -----CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEE
Q 012015 301 -----TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKI 375 (473)
Q Consensus 301 -----~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 375 (473)
....++++||.+++||+++++++.+++++.+ ++++.+.||+||++++.+.... ......+++|+|+++++++|
T Consensus 369 ~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i 446 (647)
T PTZ00237 369 EATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSI 446 (647)
T ss_pred cccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEE
Confidence 2345689999999999999999999999988 7899999999999866543222 22233479999999999999
Q ss_pred EcCCCCCCCCCCCccEEEEecC---ccccccCCCccccccccCC-CCeeecCceEEEccCCcEEEEeccCCeEEEcCeee
Q 012015 376 VDPETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLP-DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQV 451 (473)
Q Consensus 376 ~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v 451 (473)
+| ++|++++.|+.|||+++++ +++.||+++++.+.+.|.. +|||+|||+|++|+||+++++||+||+||++|++|
T Consensus 447 ~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI 525 (647)
T PTZ00237 447 LS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKV 525 (647)
T ss_pred EC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEe
Confidence 99 6899999999999999986 7899999999999877754 78999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCcceEEEcC
Q 012015 452 APAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 452 ~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|.|||++|.+||.|.||+|||
T Consensus 526 ~p~eIE~~l~~~p~V~eaavvg 547 (647)
T PTZ00237 526 QLNTIETSILKHPLVLECCSIG 547 (647)
T ss_pred CHHHHHHHHHhCCCceeeEEEe
Confidence 9999999999999999999986
No 13
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.2e-65 Score=529.16 Aligned_cols=430 Identities=20% Similarity=0.274 Sum_probs=351.0
Q ss_pred CCCCCHHHHhcc-ccc-CCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH
Q 012015 35 DAPISAVDYVSS-LRA-TLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (473)
Q Consensus 35 ~~~~~l~~~~~~-~~~-~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~ 108 (473)
+..+|+...+.+ +++ .+ |+++|+++.. +++++||+||.++++++|+.|++ +|+++||+|+++++|++++
T Consensus 84 g~~~N~~~~~l~~~~~~~~----~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~e~ 158 (666)
T PLN02654 84 GGKTNICYNCLDRNVEAGN----GDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLMEL 158 (666)
T ss_pred CCEeeHHHHHHHHhhccCC----CCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHH
Confidence 556788655554 443 36 9999998732 23789999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHH---------H----hc-----CCCe-EEEEcCC
Q 012015 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHK---------L----AK-----LKHR-TILIDSP 169 (473)
Q Consensus 109 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~----~~-----~~~~-~~~~~~~ 169 (473)
++++|||+++|++++|+++.++.+++.+++++++++++|+++..... + .. .... .+..+..
T Consensus 159 v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
T PLN02654 159 PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQ 238 (666)
T ss_pred HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccc
Confidence 99999999999999999999999999999999999999998764221 1 10 0001 1111110
Q ss_pred C----------------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHH-HhhccCCCCC
Q 012015 170 E----------------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA-SSFASSPKRV 232 (473)
Q Consensus 170 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~-~~~~~~~~~~ 232 (473)
. ++++.... ...........+++++|+|||||||.||||+++|++++.... .....+ +..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-~~~ 315 (666)
T PLN02654 239 LAMKREDTKWQEGRDVWWQDVVPNY--PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-DYK 315 (666)
T ss_pred ccccccccccccCCcccHHHHhhcC--CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-CCC
Confidence 0 11111100 001111224578999999999999999999999999865443 333344 678
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCC
Q 012015 233 SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYD 305 (473)
Q Consensus 233 ~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~ 305 (473)
+++++++.+|++|+.+. +.++.+|..|+++++.++ +++..+++.|+++++|+++++|++++.|.+... ....+
T Consensus 316 ~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 395 (666)
T PLN02654 316 PTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS 395 (666)
T ss_pred CCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC
Confidence 89999999999999987 667899999999999863 589999999999999999999999999988653 23456
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCC--CeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCC
Q 012015 306 LSSLETVACGAAPLGKDTIMAFASKFPK--VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDS 383 (473)
Q Consensus 306 l~~lr~v~~~G~~l~~~~~~~~~~~~~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~ 383 (473)
+++||.++++|+++++++++++.+.++. +++.+.||+||+++..+...........+++|+|++|++++|+| ++|++
T Consensus 396 l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~ 474 (666)
T PLN02654 396 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKE 474 (666)
T ss_pred hhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCC
Confidence 8899999999999999999999999842 68999999999987655422211234568999999999999999 78899
Q ss_pred CCCCCccEEEEec--CccccccCCCccccccccCC--CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHH
Q 012015 384 LPPGKEGELSIRG--PTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHL 459 (473)
Q Consensus 384 ~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~ 459 (473)
++.++.|||++++ |+++.||+++++.+...+.. +|||+|||+|++|+||+++++||.||+||++|++|+|.|||++
T Consensus 475 ~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~ 554 (666)
T PLN02654 475 IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESA 554 (666)
T ss_pred CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHH
Confidence 9888899999999 78999999999988766533 7899999999999999999999999999999999999999999
Q ss_pred HhcCCCcceEEEcC
Q 012015 460 LLSHREVADAAVIP 473 (473)
Q Consensus 460 l~~~~~v~~~~vvg 473 (473)
|.+||.|.||+|+|
T Consensus 555 l~~~p~V~eaaVvg 568 (666)
T PLN02654 555 LVSHPQCAEAAVVG 568 (666)
T ss_pred HHhCCCeeeEEEEe
Confidence 99999999999986
No 14
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.2e-65 Score=522.33 Aligned_cols=423 Identities=26% Similarity=0.339 Sum_probs=355.4
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
+.|+.++|.+.++++ |+++|+++. ++++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+
T Consensus 6 ~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la~~ 78 (563)
T PLN02860 6 QAHICQCLTRLATLR----GNAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLAVA 78 (563)
T ss_pred hhHHHHHHHHHHHhc----CCceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHh
Confidence 379999999999999 999999886 7899999999999999999999 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHH---HHh--cCC-Ce-EEEEcCCC------hhhhhcccCC---
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---KLA--KLK-HR-TILIDSPE------FDSMTMSWNS--- 180 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---~~~--~~~-~~-~~~~~~~~------~~~~~~~~~~--- 180 (473)
++|++++|+++.++.+++.+++++++++++++++.... .+. ... .. .+..+... +.........
T Consensus 79 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (563)
T PLN02860 79 CAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQR 158 (563)
T ss_pred hccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccC
Confidence 99999999999999999999999999999999875422 221 111 11 12222111 1111111000
Q ss_pred --CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhh
Q 012015 181 --KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (473)
Q Consensus 181 --~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~ 258 (473)
..........++++++++|||||||.||+|.++|+++..........+ ...++++++..+|++|.+++...+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 159 ALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 000111223568899999999999999999999999987766655555 67888999999999999999888999999
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeE
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~ 336 (473)
|+++++.+.+++..+++.|+++++|++.++|+++..|.+.... ....++++|.+++||+++++++.++|++.|++.++
T Consensus 238 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~ 317 (563)
T PLN02860 238 GACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKL 317 (563)
T ss_pred CceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCce
Confidence 9999999999999999999999999999999999999876432 23457899999999999999999999999988999
Q ss_pred EeecCCcccccccccccCCCC---------------------CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEe
Q 012015 337 VQAYGLTESTAGVFRTVGPDE---------------------CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (473)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~---------------------~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 395 (473)
++.||+||++..+........ .....++|+|+++++++|++.+ +|+.|||+++
T Consensus 318 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~ 391 (563)
T PLN02860 318 FSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTR 391 (563)
T ss_pred ecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEe
Confidence 999999999765443211110 1112378999999999999843 6789999999
Q ss_pred cCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 396 GPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 396 ~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+.++.||+++++.+.+.+..+|||+|||+|++|+||+++++||.||+||++|++|+|.+||++|.+||.|.+|+|+|
T Consensus 392 g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~ 469 (563)
T PLN02860 392 GPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVG 469 (563)
T ss_pred cCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEE
Confidence 999999999999999998888999999999999999999999999999999999999999999999999999999985
No 15
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.4e-64 Score=512.27 Aligned_cols=443 Identities=40% Similarity=0.616 Sum_probs=376.6
Q ss_pred eecCCCCCCCCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEE
Q 012015 21 TFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (473)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i 100 (473)
.|.+.++.... ...+|+.+++.++++++ |+++|+++...++++||+||.++++++|+.|.+ .|+++||+|++
T Consensus 9 ~~~~~~~~~~~---~~~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~i 80 (537)
T PLN02246 9 IFRSKLPDIYI---PNHLPLHDYCFERLSEF----SDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVML 80 (537)
T ss_pred EecCCCCCCCC---CCCCcHHHHHHHHHHhC----CCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEE
Confidence 44444444433 23479999999999998 999999986556899999999999999999998 89999999999
Q ss_pred EeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCeEEEEcCCC-----h
Q 012015 101 LSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSPE-----F 171 (473)
Q Consensus 101 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~~-----~ 171 (473)
+++|+++++++++||+++|++++|++|.++.+++..+++.+++++++++......+... ...++.++... +
T Consensus 81 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (537)
T PLN02246 81 LLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHF 160 (537)
T ss_pred ECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeH
Confidence 99999999999999999999999999999999999999999999999998776655432 23444444321 2
Q ss_pred hhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhcc---CCCCCCCcEEEEecChhhHHh
Q 012015 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS---SPKRVSPAVMLFTMPYFHIYG 248 (473)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~g 248 (473)
.++..... ...+.....++++++++|||||||.||+|.++|+++.......... .....+++++++.+|++|.++
T Consensus 161 ~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 161 SELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHH
Confidence 22221111 1122233457889999999999999999999999998877654331 125788999999999999999
Q ss_pred H-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHH
Q 012015 249 L-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAF 327 (473)
Q Consensus 249 ~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~ 327 (473)
+ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+.+
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~ 318 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAF 318 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHH
Confidence 8 557788999999999999999999999999999999999999999988766556678899999999999999999999
Q ss_pred HHhCCCCeEEeecCCcccccccccccC---CCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccC
Q 012015 328 ASKFPKVVLVQAYGLTESTAGVFRTVG---PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYV 404 (473)
Q Consensus 328 ~~~~~~~~~~~~yG~tE~~~~~~~~~~---~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~ 404 (473)
++.+++..+.+.||+||++.+++.... .......+++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+
T Consensus 319 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~ 398 (537)
T PLN02246 319 RAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYL 398 (537)
T ss_pred HHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhcccc
Confidence 999988899999999999876543211 11123456899999999999999778999999999999999999999999
Q ss_pred CCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 405 ~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++.+.+.+..++||+|||+|+++++|++++.||.||+||++|.+|+|.+||++|.++|+|.+|+|++
T Consensus 399 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 467 (537)
T PLN02246 399 NDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVP 467 (537)
T ss_pred CCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEc
Confidence 999999998888999999999999999999999999999999999999999999999999999999985
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-65 Score=519.31 Aligned_cols=417 Identities=25% Similarity=0.324 Sum_probs=359.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.+.++++ ||++|+++. ++++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||++
T Consensus 49 ~~~~~~~~~~a~~~----pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~ 121 (549)
T PRK07788 49 GPFAGLVAHAARRA----PDRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGK 121 (549)
T ss_pred chHHHHHHHHHHHC----CCceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 37899999999999 999999997 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCeEEEEcC----------CChhhhhcccCCCc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDS----------PEFDSMTMSWNSKH 182 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~----------~~~~~~~~~~~~~~ 182 (473)
+|++++|+++.++.+++.++++.+++++++++++....+... ....+.... ..++++.....
T Consensus 122 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (549)
T PRK07788 122 VGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSS--- 198 (549)
T ss_pred cCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCC---
Confidence 999999999999999999999999999999998876665432 112221111 12223222111
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeE
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~ 262 (473)
........++.++++|||||||.||+|.++|+++..........+ ....+++++..+|++|.+++...+.++..|+++
T Consensus 199 -~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~ 276 (549)
T PRK07788 199 -TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTLLPAPMFHATGWAHLTLAMALGSTV 276 (549)
T ss_pred -CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEEEccchHHHHHHHHHHHHHHhCCEE
Confidence 111122346789999999999999999999999998877766666 577889999999999999997788899999999
Q ss_pred EEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
++...+++..+++.++++++|++.++|+++..+++.... ...+++++|.+++||+++++++.+++.+.+ +..+++.|
T Consensus 277 v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~Y 355 (549)
T PRK07788 277 VLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLY 355 (549)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-Cccceecc
Confidence 999889999999999999999999999999999887654 455688999999999999999999999998 67899999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCee
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 420 (473)
|+||++.++.... .......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++. . . .+|||
T Consensus 356 G~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~ 429 (549)
T PRK07788 356 GSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLL 429 (549)
T ss_pred CcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCce
Confidence 9999986554322 12223457899999999999999 7899999999999999999999999998765 2 2 47999
Q ss_pred ecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 421 ~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|||+|++|+||++++.||.||+||++|++|+|.+||++|.++|+|.+|+|+|
T Consensus 430 ~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 482 (549)
T PRK07788 430 SSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIG 482 (549)
T ss_pred ecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEEC
Confidence 99999999999999999999999999999999999999999999999999985
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=8.5e-65 Score=521.65 Aligned_cols=431 Identities=20% Similarity=0.250 Sum_probs=350.3
Q ss_pred CCCCCHH-HHhcccccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 35 DAPISAV-DYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 35 ~~~~~l~-~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
...+|+. +.+.+.++.+ |+++|+++. ..++++||+||.++++++|++|++ +|+++||+|+++++|+++++
T Consensus 48 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v 122 (628)
T TIGR02316 48 GGRTNLCHNALDRHLDER----GEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAV 122 (628)
T ss_pred CCEeeHHHHHHHHHhCcC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 4556665 4555666667 999999873 124789999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH---------HHH----hc---CCCeEEEEcCC----
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AK---LKHRTILIDSP---- 169 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~---~~~~~~~~~~~---- 169 (473)
+++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+ .. ....+++++..
T Consensus 123 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 202 (628)
T TIGR02316 123 FAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM 202 (628)
T ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 99999999999999999999999999999999999999976421 111 11 12234444321
Q ss_pred --------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHH-hhccCCCCCCCcEEEEe
Q 012015 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFT 240 (473)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~-~~~~~~~~~~~~~~l~~ 240 (473)
.+.++..... ....+.....++++++|+|||||||.||||.++|+++...... ....+ +..++|++++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~ 280 (628)
T TIGR02316 203 RLIPGRDVDYAALRTQHE-DAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-GIRAGQVMFSA 280 (628)
T ss_pred CcccCccccHHHHhhccc-cCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-CCCCCcEEEEc
Confidence 1222211110 0011112245689999999999999999999999998644333 33334 67888999999
Q ss_pred cChhhHHhH-HHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEE
Q 012015 241 MPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVA 313 (473)
Q Consensus 241 ~pl~~~~g~-~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~ 313 (473)
+|++|..++ +.++.+|..|+++++.+. +++..+++.|+++++|+++++|++++.|.+... ....++++||.++
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~ 360 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLF 360 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEE
Confidence 999999887 678899999999999763 478999999999999999999999999887643 2345689999999
Q ss_pred ecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCC--CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccE
Q 012015 314 CGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP--DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (473)
Q Consensus 314 ~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Ge 391 (473)
+||+++++++.+++++.+ +..+++.||+||++..++..... ......+++|+|+++++++|+|+++|++++.|+.||
T Consensus 361 ~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Ge 439 (628)
T TIGR02316 361 LAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGV 439 (628)
T ss_pred EecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEE
Confidence 999999999999999988 78899999999998544332211 112345789999999999999966899999999999
Q ss_pred EEEecC---ccccccCCCcccccccc---CCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCC
Q 012015 392 LSIRGP---TIMKGYVGEPEVTSATL---LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHRE 465 (473)
Q Consensus 392 l~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~ 465 (473)
|+++|| +.+.||+++++.+.+.+ ..++||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||.
T Consensus 440 l~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~ 519 (628)
T TIGR02316 440 LTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPS 519 (628)
T ss_pred EEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCC
Confidence 999998 56789999988776654 246799999999999999999999999999999999999999999999999
Q ss_pred cceEEEcC
Q 012015 466 VADAAVIP 473 (473)
Q Consensus 466 v~~~~vvg 473 (473)
|.||+|+|
T Consensus 520 V~ea~Vvg 527 (628)
T TIGR02316 520 VAEVAVVG 527 (628)
T ss_pred cceEEEEe
Confidence 99999986
No 18
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4e-65 Score=526.89 Aligned_cols=427 Identities=25% Similarity=0.298 Sum_probs=344.0
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC----------CCC-----------ceecHHHHHHHHHHHHHHhHHhcCCCCCC
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLSKND 96 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~~g~~~gd 96 (473)
.|+.++|.+.++.+ ||++|+... .++ ..+||+||.++++++|++|.+ +|+++||
T Consensus 58 ~t~~~l~~~~~~~~----pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd 132 (696)
T PLN02387 58 TTLAALFEQSCKKY----SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEE 132 (696)
T ss_pred CCHHHHHHHHHHHC----CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 58999999999999 999999421 012 348999999999999999998 8999999
Q ss_pred EEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CC-eEEEEcCCC
Q 012015 97 TAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE 170 (473)
Q Consensus 97 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~ 170 (473)
+|+|+++|+++|+++++||+++|+++||+++.++.+++.+++++++++++|++.+....+... .. .++.++...
T Consensus 133 ~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~ 212 (696)
T PLN02387 133 RVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEG 212 (696)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999998766655432 11 244444211
Q ss_pred -----------------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCC
Q 012015 171 -----------------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (473)
Q Consensus 171 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~ 233 (473)
++++....... ........++++++|+|||||||.||||++||++++..+...........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 213 VDSDSSLSGSSNWTVSSFSEVEKLGKEN-PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred chhhhhhhccCCcEEEEHHHHHHhhccC-CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 12221111111 111223457899999999999999999999999999888776554435678
Q ss_pred CcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCC------C--HHHHHHHHHHcccceEEecHHHHHHHhcCCCCC---
Q 012015 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF------D--LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--- 302 (473)
Q Consensus 234 ~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~------~--~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--- 302 (473)
+|++++.+|++|++++...+..+..|+++.+.... + ...++..++++++|++.++|.++.++.+.....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 99999999999999996666677788877664321 1 234567899999999999999999886431100
Q ss_pred ----------------------------CC---------------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 303 ----------------------------GY---------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 303 ----------------------------~~---------------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
.. .+ +++|.+++||+++++++.+.++..+ ++++++
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~ 450 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQ 450 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeE
Confidence 00 01 5899999999999999988888777 899999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCC-CCC--CCCCccEEEEecCccccccCCCccccccccC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSL--PPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~-~~~--~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 415 (473)
.||+||+++.++.... .....+++|+|+|+++++|+|.+++ ..+ .++..|||+|+|+.+++||+++|+.|.+.|.
T Consensus 451 ~YG~TEt~~~~~~~~~--~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~ 528 (696)
T PLN02387 451 GYGLTETCAGATFSEW--DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYK 528 (696)
T ss_pred eechhhcccceeecCc--ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhc
Confidence 9999999876654322 2234679999999999999984433 322 2445799999999999999999999999883
Q ss_pred --CCC--eeecCceEEEccCCcEEEEeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 416 --PDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 416 --~~~--~~~TgD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.+| ||+|||+|++|+||+|+|+||+||+||+ +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 529 ~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g 591 (696)
T PLN02387 529 VDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHA 591 (696)
T ss_pred cccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEe
Confidence 345 9999999999999999999999999998 699999999999999999999999986
No 19
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=4.2e-64 Score=517.23 Aligned_cols=431 Identities=22% Similarity=0.281 Sum_probs=353.5
Q ss_pred CCCCCHHHHhc-ccccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 35 DAPISAVDYVS-SLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 35 ~~~~~l~~~~~-~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
+..+|+...+. ++++.+ |+++|+++... .+++||+||.++++++|+.|++ +|+++||+|+++++|+++++
T Consensus 53 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 127 (625)
T TIGR02188 53 GGELNVSYNCVDRHLEAR----PDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPEAA 127 (625)
T ss_pred CCEEEHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 44456655554 456667 99999987532 3689999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH---------HH----HhcCC--C-eEEEEcCC----
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HK----LAKLK--H-RTILIDSP---- 169 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~----~~~~~--~-~~~~~~~~---- 169 (473)
++++||+++|++++|+++.++.+++.+++++++++++|+++... .. +.... . .+++++..
T Consensus 128 ~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (625)
T TIGR02188 128 IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV 207 (625)
T ss_pred HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCc
Confidence 99999999999999999999999999999999999999986532 11 11111 1 13333211
Q ss_pred --------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 012015 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 241 (473)
.++++..... ..........+++++|+|||||||.||+|+++|++++..............+++++++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 285 (625)
T TIGR02188 208 PWVEGRDVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTA 285 (625)
T ss_pred CccccccccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECC
Confidence 1222221111 011223355688999999999999999999999998765544333333677889999999
Q ss_pred ChhhHHhH-HHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEe
Q 012015 242 PYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVAC 314 (473)
Q Consensus 242 pl~~~~g~-~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~ 314 (473)
|++|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ...+++++|.+++
T Consensus 286 ~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~ 365 (625)
T TIGR02188 286 DVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGS 365 (625)
T ss_pred CchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEE
Confidence 99999887 568899999999999753 4799999999999999999999999999886542 3356889999999
Q ss_pred cCCCCCHHHHHHHHHhCC--CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCC-CCCccE
Q 012015 315 GAAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLP-PGKEGE 391 (473)
Q Consensus 315 ~G~~l~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~-~g~~Ge 391 (473)
+|+++++++.+++.+.++ ++++++.||+||+++.++...........+++|+|+++++++|+| ++|++++ +|+.||
T Consensus 366 ~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~Ge 444 (625)
T TIGR02188 366 VGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGY 444 (625)
T ss_pred ecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEE
Confidence 999999999999999884 478999999999987755432222234567899999999999999 8899999 899999
Q ss_pred EEEec--CccccccCCCccccccccCC--CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcc
Q 012015 392 LSIRG--PTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVA 467 (473)
Q Consensus 392 l~v~~--~~~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~ 467 (473)
|++++ ++++.||+++++.+.+.+.. +|||+|||+|++|+||+++++||+||+||++|++|+|.|||++|.+||.|.
T Consensus 445 L~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~ 524 (625)
T TIGR02188 445 LVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVA 524 (625)
T ss_pred EEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcc
Confidence 99999 68999999999887776643 789999999999999999999999999999999999999999999999999
Q ss_pred eEEEcC
Q 012015 468 DAAVIP 473 (473)
Q Consensus 468 ~~~vvg 473 (473)
||+|+|
T Consensus 525 e~~vvg 530 (625)
T TIGR02188 525 EAAVVG 530 (625)
T ss_pred eEEEEe
Confidence 999985
No 20
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.7e-64 Score=484.86 Aligned_cols=429 Identities=25% Similarity=0.371 Sum_probs=361.5
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECC------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSV------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~ 108 (473)
+...|+.+.|.+.+..+ ++.+++-... ....+||.|..+++..++..|++ +|+++++.|+|+..|++||
T Consensus 72 ~~~~T~~~~f~~~~~~~----~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKS----GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CCcccHHHHhhcchhcc----CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCChhh
Confidence 67799999999999999 9989885432 23789999999999999999997 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc-cchHHHHhcC-------CCe-EEEEcCC----------
Q 012015 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT-SSVVHKLAKL-------KHR-TILIDSP---------- 169 (473)
Q Consensus 109 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~-------~~~-~~~~~~~---------- 169 (473)
+++..||...|++.||+..+++++.+.++++++.+.+++++ +.....+.+. .++ ++.++..
T Consensus 147 iis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhc
Confidence 99999999999999999999999999999999999999999 5555554431 122 3334432
Q ss_pred ------ChhhhhcccCCCccccc-cccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHH---hhccC--CCCCCCcEE
Q 012015 170 ------EFDSMTMSWNSKHELDR-AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS---SFASS--PKRVSPAVM 237 (473)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~---~~~~~--~~~~~~~~~ 237 (473)
+|+++...+... ...+ ....+++.|.|+|||||||.||||++||+|++..+.. ..... ......|++
T Consensus 227 ~gv~v~S~~e~~~lG~~~-~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~ 305 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKN-QRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVY 305 (691)
T ss_pred CCeEEEEHHHHHhhcccc-cCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceE
Confidence 255555554322 2222 4678899999999999999999999999999986543 22222 123347999
Q ss_pred EEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC----CC-----------
Q 012015 238 LFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TD----------- 302 (473)
Q Consensus 238 l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~----------- 302 (473)
++++||.|++....-...+..|+.+.+..+ |+..+.+.|++.+||.+.++|.+++++-+... +.
T Consensus 306 lSyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 306 LSYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EEeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 999999999999777777799999999985 88999999999999999999999887654221 00
Q ss_pred -----------CCCC-------------------CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccc
Q 012015 303 -----------GYDL-------------------SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (473)
Q Consensus 303 -----------~~~l-------------------~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 352 (473)
+... .++|.+++|++|+++++...++..+ ++++.++||+|||++.++..
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~ 463 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLT 463 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEec
Confidence 0000 3689999999999999999999998 89999999999999655543
Q ss_pred cCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCC
Q 012015 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (473)
Q Consensus 353 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 432 (473)
.. .+ ...+++|.|+|+++++++|.++.+.-..|..|||||+|+.+++||+++|+.|.+.++.|||+||||+|+++++|
T Consensus 464 ~~-~d-~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G 541 (691)
T KOG1256|consen 464 LP-GD-NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNG 541 (691)
T ss_pred cC-CC-CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCc
Confidence 22 22 26799999999999999998777777777789999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 433 FLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 433 ~l~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.|+|+||++++||+ +|+.|.|..||++..+.+-|.+.+|.|
T Consensus 542 ~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g 583 (691)
T KOG1256|consen 542 TLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLG 583 (691)
T ss_pred cEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEEC
Confidence 99999999999999 899999999999999999999999876
No 21
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=8.7e-64 Score=513.74 Aligned_cols=426 Identities=27% Similarity=0.365 Sum_probs=351.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEEC------CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINS------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
+.|+.++|.+.++++ |+++|+++. ...+++||+||.++++++|+.|++ +|+++||+|+++++|++++++
T Consensus 24 ~~t~~~~l~~~a~~~----p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n~~e~~~ 98 (632)
T PRK07529 24 PASTYELLSRAAARH----PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPNLPETHF 98 (632)
T ss_pred CCCHHHHHHHHHHHC----CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHH
Confidence 369999999999999 999999863 125799999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch-----HHHHh----cC-CC-eEEEEcCC----------
Q 012015 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP---------- 169 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~~---------- 169 (473)
++|||+++| +++|+++.++.+++.++++.+++++++++... ..++. .. .. .++.++..
T Consensus 99 ~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 177 (632)
T PRK07529 99 ALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLA 177 (632)
T ss_pred HHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccc
Confidence 999999999 57999999999999999999999999997543 12221 11 11 12233221
Q ss_pred -------------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcE
Q 012015 170 -------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAV 236 (473)
Q Consensus 170 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 236 (473)
++.+.+...............++++++++|||||||.||+|.+||+++..........+ ...++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~d~ 256 (632)
T PRK07529 178 VPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-GLGPGDT 256 (632)
T ss_pred ccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-CCCCCCE
Confidence 12222222111101111223568999999999999999999999999988776666555 5688999
Q ss_pred EEEecChhhHHhH-HHHHHHhhhcCeEEEecC--C-C---HHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCc
Q 012015 237 MLFTMPYFHIYGL-FFCFRAAALMETAVVMQR--F-D---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSL 309 (473)
Q Consensus 237 ~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l 309 (473)
+++.+|++|.+++ ..++.++..|+++++.++ + + ...+++.++++++|++.++|+++..|++... ...+++++
T Consensus 257 ~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~sl 335 (632)
T PRK07529 257 VFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSL 335 (632)
T ss_pred EEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccce
Confidence 9999999999988 568899999999999753 2 1 3678999999999999999999999988653 23468899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcC-CCC---CCCC
Q 012015 310 ETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDP-ETG---DSLP 385 (473)
Q Consensus 310 r~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~---~~~~ 385 (473)
|.+++||+++++++.+++++.+ ++++++.||+||++.++.... .......+++|+|+|+++++|++. +++ ++++
T Consensus 336 r~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~-~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~ 413 (632)
T PRK07529 336 RYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP-PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCA 413 (632)
T ss_pred EEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCC-ccccccCCCcccccCCceEEEEEcCCCCcccccCC
Confidence 9999999999999999999988 899999999999987665432 222335689999999999988532 445 7899
Q ss_pred CCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCC
Q 012015 386 PGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHRE 465 (473)
Q Consensus 386 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~ 465 (473)
.|+.|||+|+|+.++.||++++ .+...|..+|||+|||+|++|+||++++.||.||+||++|++|+|.+||++|.+||+
T Consensus 414 ~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~ 492 (632)
T PRK07529 414 VDEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPA 492 (632)
T ss_pred CCCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCC
Confidence 9999999999999999999865 455666678999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcC
Q 012015 466 VADAAVIP 473 (473)
Q Consensus 466 v~~~~vvg 473 (473)
|.+|+|+|
T Consensus 493 V~~a~vvg 500 (632)
T PRK07529 493 VALAAAVG 500 (632)
T ss_pred eeEEEEEe
Confidence 99999985
No 22
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.5e-63 Score=505.51 Aligned_cols=432 Identities=38% Similarity=0.619 Sum_probs=367.3
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..|+.+.+.+.++.+ |+++|+++...++.+||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+
T Consensus 27 ~~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~ 101 (546)
T PLN02330 27 KLTLPDFVLQDAELY----ADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVVVVVLPNVAEYGIVALGIM 101 (546)
T ss_pred CCcHHHHHhhhhhcC----CCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 478999999999999 999999986557899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcC------CChhhhhcccCCC-cccccccc
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS------PEFDSMTMSWNSK-HELDRAKV 189 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~ 189 (473)
++|++++|+++..+.+++.++++.++++++++++.....+......++.++. ..+.++....... ........
T Consensus 102 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (546)
T PLN02330 102 AAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAADRAGDTSDNEEI 181 (546)
T ss_pred HhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhccccCcccccccC
Confidence 9999999999999999999999999999999999888777666555555543 2244443322111 01112234
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC-CCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecC
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR 267 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~-~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~ 267 (473)
..+++++++|||||||.||+|.++|+++...+....... ......++.+..+|++|.+++ ..++.++..|+++++.+.
T Consensus 182 ~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~ 261 (546)
T PLN02330 182 LQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSR 261 (546)
T ss_pred CcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecc
Confidence 467899999999999999999999999987665432211 122345688999999999988 467788999999999999
Q ss_pred CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCC--CceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccc
Q 012015 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS--SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (473)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~--~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~ 345 (473)
+++..+++.++++++|++.++|+++..+.........++. ++|.+++||+++++++.+++.+.|+++++++.||+||+
T Consensus 262 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 341 (546)
T PLN02330 262 FELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEH 341 (546)
T ss_pred cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEeccccccc
Confidence 9999999999999999999999999999886544444444 47899999999999999999999989999999999999
Q ss_pred ccccccccCCCC---CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeec
Q 012015 346 TAGVFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (473)
Q Consensus 346 ~~~~~~~~~~~~---~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 422 (473)
+.+......... .....++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.++.+|||+|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~T 421 (546)
T PLN02330 342 SCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHT 421 (546)
T ss_pred ccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceec
Confidence 765443211111 12346899999999999999888999999999999999999999999999999988888999999
Q ss_pred CceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 423 gD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+|++++||++++.||.+|+||++|++|+|.+||.+|.++|.|.+|+|++
T Consensus 422 GD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 472 (546)
T PLN02330 422 GDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVP 472 (546)
T ss_pred ccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEe
Confidence 999999999999999999999999999999999999999999999999985
No 23
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.5e-63 Score=504.07 Aligned_cols=426 Identities=25% Similarity=0.397 Sum_probs=362.7
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~l 113 (473)
.++.+.+.+.++.+ |+++|+++... .+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|
T Consensus 24 ~~l~~~l~~~a~~~----p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 24 RTINDDLDACVASC----PDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHH
Confidence 68999999999999 99999998631 2799999999999999999998 899999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch-----HHHHh----cC-CC-eEEEEcC---CChhhhhccc-
Q 012015 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDS---PEFDSMTMSW- 178 (473)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~---~~~~~~~~~~- 178 (473)
||+++|++++|++|.++.+++.++++.++++++++++.. .+.+. .. .. .++.++. .++.++....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPA 178 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCc
Confidence 999999999999999999999999999999999998753 11111 11 11 2333332 1233322111
Q ss_pred ----CCC-ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHH
Q 012015 179 ----NSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (473)
Q Consensus 179 ----~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~ 252 (473)
... ..........+++++++|||||||.||+|.++|+++...+......+ ...+++++++.+|++|..++ ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~ 257 (547)
T PRK13295 179 WEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-GLGADDVILMASPMAHQTGFMYGL 257 (547)
T ss_pred cccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHH
Confidence 000 01111234568899999999999999999999999988887766665 67889999999999999987 668
Q ss_pred HHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012015 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (473)
Q Consensus 253 l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 332 (473)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++.+.+
T Consensus 258 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~- 336 (547)
T PRK13295 258 MMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL- 336 (547)
T ss_pred HHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-
Confidence 8999999999999888999999999999999999999999999987766666789999999999999999999999998
Q ss_pred CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCcccccc
Q 012015 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (473)
Q Consensus 333 ~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (473)
++++++.||+||++.+.+............++|+|+++++++|+| +++++++.|+.|||+|+|+.++.||+++++.+..
T Consensus 337 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~ 415 (547)
T PRK13295 337 GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGT 415 (547)
T ss_pred CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCcccccc
Confidence 899999999999987655432222223346889999999999999 6789999999999999999999999999998877
Q ss_pred ccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 413 ~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
. .+|||+|||+|+++++|++++.||.||++|++|++|+|.+||.+|.+++.|.+|+|+|
T Consensus 416 ~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~ 474 (547)
T PRK13295 416 D--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVA 474 (547)
T ss_pred C--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 5 5789999999999999999999999999999999999999999999999999999975
No 24
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-63 Score=511.57 Aligned_cols=431 Identities=22% Similarity=0.300 Sum_probs=351.9
Q ss_pred CCCCCHHH-HhcccccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 35 DAPISAVD-YVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 35 ~~~~~l~~-~~~~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
+..+|+.. .+.+.++++ |+++|+++.. ..+++||+||.++++++|+.|++ +|+++||+|+++++|+++++
T Consensus 63 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 137 (637)
T PRK00174 63 DGELNVSYNCLDRHLKTR----GDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAA 137 (637)
T ss_pred CCEeEHHHHHHHHhhccC----CCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 44466654 454566677 9999998742 23589999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH---------HHH----hcC-CC-eEEEEcCC-----
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AKL-KH-RTILIDSP----- 169 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~~-~~-~~~~~~~~----- 169 (473)
+++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+ ... .. .+++++..
T Consensus 138 ~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (637)
T PRK00174 138 VAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD 217 (637)
T ss_pred HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC
Confidence 99999999999999999999999999999999999999976532 111 111 11 22222211
Q ss_pred -------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecC
Q 012015 170 -------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (473)
Q Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~p 242 (473)
.++++..... ..........+++++++|||||||.||+|+++|++++..............+++++++.+|
T Consensus 218 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 295 (637)
T PRK00174 218 WVEGRDLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTAD 295 (637)
T ss_pred cCCCCcccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCC
Confidence 1222222111 0112223456889999999999999999999999987655433332226778899999999
Q ss_pred hhhHHhH-HHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEec
Q 012015 243 YFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACG 315 (473)
Q Consensus 243 l~~~~g~-~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~ 315 (473)
++|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ...++++||.+++|
T Consensus 296 ~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 375 (637)
T PRK00174 296 VGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSV 375 (637)
T ss_pred chHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEe
Confidence 9999887 568899999999998753 4789999999999999999999999999886542 34568899999999
Q ss_pred CCCCCHHHHHHHHHhCC--CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEE
Q 012015 316 AAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELS 393 (473)
Q Consensus 316 G~~l~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~ 393 (473)
|+++++++.+++.+.++ ++++++.||+||++..+............+++|+|++|++++|+| +++++++.|+.|||+
T Consensus 376 Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~ 454 (637)
T PRK00174 376 GEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLV 454 (637)
T ss_pred CCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEE
Confidence 99999999999998884 378999999999987655422211223457899999999999999 789999999999999
Q ss_pred Eec--CccccccCCCccccccccC--CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceE
Q 012015 394 IRG--PTIMKGYVGEPEVTSATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (473)
Q Consensus 394 v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (473)
|+| +++++||+++++.+.+.+. .+|||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.++|+|.+|
T Consensus 455 v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~ 534 (637)
T PRK00174 455 IKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEA 534 (637)
T ss_pred EcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceE
Confidence 999 6899999999988876653 378999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q 012015 470 AVIP 473 (473)
Q Consensus 470 ~vvg 473 (473)
+|+|
T Consensus 535 ~Vvg 538 (637)
T PRK00174 535 AVVG 538 (637)
T ss_pred EEEe
Confidence 9985
No 25
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-63 Score=504.43 Aligned_cols=422 Identities=31% Similarity=0.490 Sum_probs=364.8
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhc-CCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
.|+.+++.+.++.+ |+++|+++. ++++||+||.++++++|..|.+ . |+++|++|+++++|+++++++++||+
T Consensus 10 ~tl~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 10 TSLFHNLEVSARRY----PDKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCHHHHHHHHHHHc----CCCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 78999999999988 999999988 7899999999999999999998 7 99999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEcCC----------------------
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP---------------------- 169 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~---------------------- 169 (473)
++|++++|+++..+.+++.++++.+++++++++.+....+.+. ..+ ++..+..
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQ 162 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccc
Confidence 9999999999999999999999999999999998776655432 111 1111100
Q ss_pred --------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 012015 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 241 (473)
.+++...... ........++++++++|||||||.||+|.++|++++..+....... .....+++++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~ 238 (546)
T PRK08314 163 ALAPGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-NSTPESVVLAVL 238 (546)
T ss_pred cccccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCceEEEEc
Confidence 0111111000 1112234568999999999999999999999999999888766665 678899999999
Q ss_pred ChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012015 242 PYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (473)
Q Consensus 242 pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~ 320 (473)
|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.........+++++|.+++||++++
T Consensus 239 p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 239 PLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 99999998 66789999999999999999999999999999999999999999988776555667889999999999999
Q ss_pred HHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccc
Q 012015 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (473)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 400 (473)
+++.+++.+.+ +.++++.||+||++....... ......+++|.|+++++++|+|++++++++.|+.|||+++|+.++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNP--PDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCC--CcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99999999998 789999999999987655422 222345789999999999999988899999999999999999999
Q ss_pred cccCCCccccccccCC---CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 401 KGYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 401 ~gy~~~~~~~~~~~~~---~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.||+++++.+.+.|.. ++||+|||+|+++++|++++.||.||+||++|.+|+|.+||++|.++|+|.+++|++
T Consensus 396 ~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~ 471 (546)
T PRK08314 396 KGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIA 471 (546)
T ss_pred ccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEe
Confidence 9999999998877642 359999999999999999999999999999999999999999999999999999875
No 26
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-63 Score=507.03 Aligned_cols=422 Identities=23% Similarity=0.353 Sum_probs=348.0
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCC--------ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTG--------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
+|+.+++.+.++++ |+++|+++...+ +++||+||.++++++|++|.+ .|+++||+|+++++|+++++
T Consensus 6 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~ 80 (552)
T PRK09274 6 ANIARHLPRAAQER----PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFF 80 (552)
T ss_pred hhHHHHHHHHHHhC----CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHH
Confidence 68999999999888 999999886322 289999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc--chHHHHhcC---CC-eEEEEcC------CChhhhhcc
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS--SVVHKLAKL---KH-RTILIDS------PEFDSMTMS 177 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~--~~~~~~~~~---~~-~~~~~~~------~~~~~~~~~ 177 (473)
++++||+++|++++|++|.++.+++.+++++++++++|+++ .....+... .. ..+.++. ..+.++...
T Consensus 81 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 160 (552)
T PRK09274 81 ALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRD 160 (552)
T ss_pred HHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhccc
Confidence 99999999999999999999999999999999999999875 222222211 01 1222221 122222211
Q ss_pred cCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhh
Q 012015 178 WNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA 257 (473)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~ 257 (473)
.. ..........++++++++|||||||.||+|.++|+++...+......+ ...++++.++.+|++|.++ +.
T Consensus 161 ~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~~-------~~ 231 (552)
T PRK09274 161 GA-AAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEIDLPTFPLFALFG-------PA 231 (552)
T ss_pred Cc-cccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCceeeeccCHHHhhh-------hh
Confidence 11 101122334568899999999999999999999999998887766666 6788899999999987654 34
Q ss_pred hcCeEEEec-------CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHh
Q 012015 258 LMETAVVMQ-------RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (473)
Q Consensus 258 ~G~~~v~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 330 (473)
.|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.......+++++|.+++||+++++++.+++.+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~ 311 (552)
T PRK09274 232 LGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAM 311 (552)
T ss_pred hCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHH
Confidence 577777754 3688999999999999999999999999998766566678999999999999999999999999
Q ss_pred CC-CCeEEeecCCcccccccccccCC------C--CCCCCCCccccCCCcEEEEEcCC--------CCCCCCCCCccEEE
Q 012015 331 FP-KVVLVQAYGLTESTAGVFRTVGP------D--ECRRWGSTGRLSAGLEAKIVDPE--------TGDSLPPGKEGELS 393 (473)
Q Consensus 331 ~~-~~~~~~~yG~tE~~~~~~~~~~~------~--~~~~~~~~G~p~~~~~~~i~d~~--------~~~~~~~g~~Gel~ 393 (473)
++ ++++++.||+||++.+++..... . ......++|+|+++++++|+|+. ++++++.|+.|||+
T Consensus 312 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~ 391 (552)
T PRK09274 312 LPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIV 391 (552)
T ss_pred cCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEE
Confidence 96 47999999999998765532211 0 11122378999999999999852 46788999999999
Q ss_pred EecCccccccCCCccccccccC--CCC--eeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceE
Q 012015 394 IRGPTIMKGYVGEPEVTSATLL--PDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (473)
Q Consensus 394 v~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (473)
++|+.++.||+++++.+...|. .+| ||+|||+|++|+||+|+++||.||+||++|++|+|.|||++|.+||.|.+|
T Consensus 392 v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~ 471 (552)
T PRK09274 392 VAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRS 471 (552)
T ss_pred EecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCccccee
Confidence 9999999999999999887653 356 999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q 012015 470 AVIP 473 (473)
Q Consensus 470 ~vvg 473 (473)
+|+|
T Consensus 472 ~v~~ 475 (552)
T PRK09274 472 ALVG 475 (552)
T ss_pred EEEE
Confidence 9985
No 27
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-65 Score=453.37 Aligned_cols=424 Identities=27% Similarity=0.359 Sum_probs=370.0
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.+.++++++ ||++|++++ ++.+||+||.++++++|..|++ +|+++||+|.+.+||..++++++||+++
T Consensus 28 ~~l~d~L~~~A~~~----pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FALlr 100 (542)
T COG1021 28 RTLTDILTDHAARY----PDRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFALLR 100 (542)
T ss_pred CcHHHHHHHHHhhc----CCceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHHHHH
Confidence 79999999999999 999999999 8889999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch--------HHHHh-c-CCCeEEEEc-CCC----hhhhhcccCCCc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKLA-K-LKHRTILID-SPE----FDSMTMSWNSKH 182 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~-~-~~~~~~~~~-~~~----~~~~~~~~~~~~ 182 (473)
+|+.+|.--|.....++.+..+...++.+|++... ...+. + ...+.+.+. ..+ ....+.... ..
T Consensus 101 lGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a-~~ 179 (542)
T COG1021 101 LGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPA-GL 179 (542)
T ss_pred cCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCcc-cc
Confidence 99999998899999999999999999999987532 11111 1 233444443 221 111111111 10
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH--HHHHHHhhhcC
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL--FFCFRAAALME 260 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~--~~~l~~l~~G~ 260 (473)
..+....+++++++...+.||||.||.|..+|.....++....+.. +++..++.++.+|..|.+-+ -..+..++.|+
T Consensus 180 ~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG 258 (542)
T COG1021 180 FTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GFDQQTVYLCALPAAHNFPLSSPGALGVFLAGG 258 (542)
T ss_pred CCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-CcCccceEEEecccccCCCCCCcchhheeeecc
Confidence 1122345678899999999999999999999999999888888887 89999999999999998887 46899999999
Q ss_pred eEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
++|+.++.+++..+.+|+++++|+...+|.+...|+++.+....+|+|||.+-+||..+++++.+++...+ ++.+-+.|
T Consensus 259 ~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVF 337 (542)
T COG1021 259 TVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVF 337 (542)
T ss_pred EEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHh
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999 99999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccC-CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCe
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 419 (473)
||.|.-. ++.........-..+-|+|+ |.-+++|+| ++|+++++|+.|+|..+||+..+||++.|+.+...|+.+|+
T Consensus 338 GMAEGLv-nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GF 415 (542)
T COG1021 338 GMAEGLV-NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGF 415 (542)
T ss_pred hhhhhhh-cccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCc
Confidence 9999533 33222222223345789998 678999999 89999999999999999999999999999999999999999
Q ss_pred eecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 420 ~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+|||++++++||++.+.||.+|+|+.+|++|..+|||+.|..||.|.+|++|+
T Consensus 416 YrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVa 469 (542)
T COG1021 416 YRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVA 469 (542)
T ss_pred eecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhc
Confidence 999999999999999999999999999999999999999999999999999874
No 28
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-63 Score=501.80 Aligned_cols=417 Identities=23% Similarity=0.314 Sum_probs=354.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.+.++++ ||++|+++. ++++||+||.++++++|++|.+ +|+++|++|+++++|+++++++++||++
T Consensus 43 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 115 (537)
T PRK13382 43 MGPTSGFAIAAQRC----PDRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANR 115 (537)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHH
Confidence 68999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC------CCeEEEEcCC----ChhhhhcccCCCcccccc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDSP----EFDSMTMSWNSKHELDRA 187 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 187 (473)
+|++++|+++.++.+++.+++++++++++|++......+... ....+.+... .++.+..... . ...
T Consensus 116 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 191 (537)
T PRK13382 116 IGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA---G-QRP 191 (537)
T ss_pred cCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccC---c-CCC
Confidence 999999999999999999999999999999997765544321 1112222211 1222221111 0 011
Q ss_pred ccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC
Q 012015 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (473)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~ 267 (473)
...+++.++++|||||||.||+|.++|+++..........+ ....+++++..+|++|.+++...+.++..|+++++...
T Consensus 192 ~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 270 (537)
T PRK13382 192 EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRR 270 (537)
T ss_pred CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCC
Confidence 22457789999999999999999999998887776666555 56778899999999999999888999999999999888
Q ss_pred CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccc
Q 012015 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (473)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~ 345 (473)
+++..+++.|+++++|++.++|++++.|.+.... ...+++++|.+++||+++++++.+.|.+.+ +..+++.||+||+
T Consensus 271 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~ 349 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEA 349 (537)
T ss_pred cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccccccc
Confidence 9999999999999999999999999999876432 234567899999999999999999999998 6789999999999
Q ss_pred ccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCce
Q 012015 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (473)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~ 425 (473)
+.++.... .......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+ ++.+.. + .+|||+|||+
T Consensus 350 ~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl 423 (537)
T PRK13382 350 GMIATATP-ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDV 423 (537)
T ss_pred CcceecCh-hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCce
Confidence 87665422 11223457999999999999999 67899999999999999999999998 444443 3 3799999999
Q ss_pred EEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 426 CYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 426 ~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++++||++++.||.||+||.+|++|+|.+||.+|.++|+|.+|+|+|
T Consensus 424 ~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~ 471 (537)
T PRK13382 424 GYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIG 471 (537)
T ss_pred EEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEc
Confidence 999999999999999999999999999999999999999999999975
No 29
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-63 Score=502.20 Aligned_cols=426 Identities=27% Similarity=0.455 Sum_probs=355.2
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..|+.+.+.+.++.+ |+++|+++. ++++||+||.++++++|+.|.+..|+++||+|+++++|++++++++|||+
T Consensus 23 ~~~~~~~l~~~a~~~----p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~ 96 (562)
T PRK05677 23 YPNIQAVLKQSCQRF----ADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAM 96 (562)
T ss_pred cCcHHHHHHHHHHhC----CCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 358999999999988 999999987 78999999999999999999863599999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc----CCCeEEEEcC-CC---------------------
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS-PE--------------------- 170 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~~~~~~-~~--------------------- 170 (473)
++|++++|++|.++.+++.++++.++++++|++......+.+ ...+.+.+.. .+
T Consensus 97 ~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK05677 97 RAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMV 176 (562)
T ss_pred HcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccc
Confidence 999999999999999999999999999999998765543322 1122222211 00
Q ss_pred ----------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC-CCC-CCcEEE
Q 012015 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRV-SPAVML 238 (473)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~-~~~-~~~~~l 238 (473)
+.+...... ..........++++++++|||||||.||+|.++|+++..........+. ... ..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 177 PAYHLPQAVKFNDALAKGA-GQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred cccCCcccccHHHHHhcCC-CCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 011110000 0011122335689999999999999999999999999876654433221 122 346889
Q ss_pred EecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012015 239 FTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (473)
Q Consensus 239 ~~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G 316 (473)
+.+|++|.+++ +.++.++..|++.++.+ .+++..+++.|+++++|.++++|+++..+..........++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 99999999998 56777888888777665 57899999999999999999999999999876544455678999999999
Q ss_pred CCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEec
Q 012015 317 APLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (473)
Q Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 396 (473)
+++++++.+.|.+.+ ++++++.||+||++.++.... ......+++|+|+++++++|+| +++++++.|+.|||+++|
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~--~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNP--SQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecC--ccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEec
Confidence 999999999999987 889999999999987665422 2233457899999999999999 578999999999999999
Q ss_pred CccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 397 PTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 397 ~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.++.||+++++.+.+.|..+|||+|||+|+++++|++++.||.+|+||++|.+|+|.+||.+|.++|+|.+++|+|
T Consensus 412 ~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g 488 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIG 488 (562)
T ss_pred CccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999985
No 30
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-63 Score=495.79 Aligned_cols=416 Identities=20% Similarity=0.312 Sum_probs=357.9
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
|++.+.|.+.++++ ||++|+++. +.++||.||.++++++|++|.+ .| .+|++|+|+++|+++++++++||++
T Consensus 1 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~-~~~~~v~i~~~~~~~~~~~~la~~~ 72 (487)
T PRK07638 1 MGITKEYKKHASLQ----PNKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KE-SKNKTIAILLENRIEFLQLFAGAAM 72 (487)
T ss_pred CChHHHHHHHHHhC----CCCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46888999999998 999999988 8899999999999999999998 67 4899999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 197 (473)
+|++++|+++.++.+++.++++.+++++++++......+.....+++.++ .+......... .........++++++
T Consensus 73 ~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~a~i 148 (487)
T PRK07638 73 AGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID--EWKRMIEKYLP--TYAPIENVQNAPFYM 148 (487)
T ss_pred cCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh--hhhhhhhhccc--cccccccCCCCcEEE
Confidence 99999999999999999999999999999999866554443333333332 22222211110 111122334678999
Q ss_pred EccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHH
Q 012015 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (473)
Q Consensus 198 ~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i 277 (473)
+|||||||.||+|+++|+++...+......+ ...++|+++...|++|..+++..+.++..|+++++.+.+++..+++.+
T Consensus 149 ~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i 227 (487)
T PRK07638 149 GFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKL 227 (487)
T ss_pred EeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHH
Confidence 9999999999999999999998887766666 678899999999999998888889999999999999999999999999
Q ss_pred HHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC
Q 012015 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (473)
Q Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 357 (473)
+++++|++.++|+++..|.+... ...+.+.++++|+++++++.+++.+.+++.++++.||+||++.++.... ...
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~ 302 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-EES 302 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-ccc
Confidence 99999999999999999988632 2345667788999999999999999998999999999999987765532 222
Q ss_pred CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEE
Q 012015 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (473)
Q Consensus 358 ~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~ 437 (473)
.....++|+|+++++++|+| +++.++++|+.|||+++|+.++.||+++++.+.+.+ .+|||+|||+|++|++|+++++
T Consensus 303 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~ 380 (487)
T PRK07638 303 ERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIV 380 (487)
T ss_pred CCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEE
Confidence 33457899999999999999 679999999999999999999999999998876654 6899999999999999999999
Q ss_pred eccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 438 DRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 438 GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||.+|+||++|.+|+|.+||++|.++|.|.+|+|+|
T Consensus 381 GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 416 (487)
T PRK07638 381 GREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIG 416 (487)
T ss_pred ecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 999999999999999999999999999999999985
No 31
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-64 Score=518.68 Aligned_cols=420 Identities=23% Similarity=0.280 Sum_probs=338.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECC-------------------------CCceecHHHHHHHHHHHHHHhHHhcC
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSV-------------------------TGLRVSFSEFTRRTNSLASYLQNVTR 91 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~~g 91 (473)
..|+.++|.+.++.+ ||++|+.... ..+++||+||.++++++|+.|.+ +|
T Consensus 68 ~~t~~~~~~~~~~~~----p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~G 142 (700)
T PTZ00216 68 GPNFLQRLERICKER----GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LG 142 (700)
T ss_pred CCCHHHHHHHHHHhC----CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hC
Confidence 358999999999999 9999998731 24789999999999999999998 89
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc------C-CCeEE
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L-KHRTI 164 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------~-~~~~~ 164 (473)
+++||+|+|+++|+++++++++||+++|++++|+++.++.+++.++++++++++++++......+.. . ...++
T Consensus 143 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii 222 (700)
T PTZ00216 143 LTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTII 222 (700)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999998765544321 1 12344
Q ss_pred EEcCC------------ChhhhhcccC--CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--
Q 012015 165 LIDSP------------EFDSMTMSWN--SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-- 228 (473)
Q Consensus 165 ~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~-- 228 (473)
.++.. .++++..... ...........++++++++|||||||.||||++||+++++.+......+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~ 302 (700)
T PTZ00216 223 YLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLND 302 (700)
T ss_pred EECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhccc
Confidence 44321 1333322210 0101112234578999999999999999999999999998877654432
Q ss_pred --CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHH-------HHHHcccceEEecHHHHHHHhcCC
Q 012015 229 --PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLK-------AVEEFRVTHAAVTPPIVVAMSKGG 299 (473)
Q Consensus 229 --~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~ 299 (473)
....+++++++.+|++|++++......+..|+++++. ++..+.+ .++++++|++.++|.+++.+.+..
T Consensus 303 ~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~ 379 (700)
T PTZ00216 303 LIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAV 379 (700)
T ss_pred ccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHH
Confidence 1236789999999999999986555667778777663 3455544 688999999999999998876421
Q ss_pred CC-------------------------CCCC---------------C-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 300 ST-------------------------DGYD---------------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 300 ~~-------------------------~~~~---------------l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
.. .+.. + +++|.+++||+++++++.+.++..+ + ++++
T Consensus 380 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~ 457 (700)
T PTZ00216 380 EAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQ 457 (700)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhh
Confidence 00 0000 1 5799999999999999998887776 5 8999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCC-CCCCCCCccEEEEecCccccccCCCccccccccCCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD 417 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 417 (473)
.||+||+++.++... ......+++|+|+++++++|+|.+.. ...+++..|||+|+|+++++||+++|+.|++.|+.+
T Consensus 458 ~YG~TEt~~~~~~~~--~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~d 535 (700)
T PTZ00216 458 GWGLTETVCCGGIQR--TGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDED 535 (700)
T ss_pred ccCcccccccccccC--CCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhcccc
Confidence 999999987655432 22334689999999999999995432 234556789999999999999999999999999889
Q ss_pred CeeecCceEEEccCCcEEEEeccCCeEE-EcCeeeChHHHHHHHhcCCCcce
Q 012015 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIK-YKGYQVAPAELEHLLLSHREVAD 468 (473)
Q Consensus 418 ~~~~TgD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~IE~~l~~~~~v~~ 468 (473)
|||+|||+|++|+||+|+|+||+||+|| .+|++|+|.+||++|.+||.|.+
T Consensus 536 Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~ 587 (700)
T PTZ00216 536 GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVP 587 (700)
T ss_pred CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCccc
Confidence 9999999999999999999999999999 69999999999999999999997
No 32
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.3e-63 Score=508.80 Aligned_cols=427 Identities=23% Similarity=0.268 Sum_probs=342.8
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEEC-----CCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
..|+.+++.+.++++ |+++|+... ..+ ..+||+|+.++++++|++|.+ .|+++||+|+|+++|+++|+
T Consensus 41 ~~t~~~~~~~~~~~~----p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ew~ 115 (660)
T PLN02430 41 ITTAWDIFSKSVEKY----PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-SGAEPGSRVGIYGSNCPQWI 115 (660)
T ss_pred CCCHHHHHHHHHHhC----CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 368999999999999 999998642 111 357999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHH-HHhc----C-CCe-EEEEcCC-------------
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-KLAK----L-KHR-TILIDSP------------- 169 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~----~-~~~-~~~~~~~------------- 169 (473)
++++||+++|+++||+++.++++++.++++++++++++++..... .+.. . ..+ ++.++..
T Consensus 116 ~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 195 (660)
T PLN02430 116 VAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGV 195 (660)
T ss_pred HHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCc
Confidence 999999999999999999999999999999999999999875332 2211 1 122 3333321
Q ss_pred ---ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhcc---C-CCCCCCcEEEEecC
Q 012015 170 ---EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS---S-PKRVSPAVMLFTMP 242 (473)
Q Consensus 170 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~---~-~~~~~~~~~l~~~p 242 (473)
.++++....... ........++++++++|||||||.||||++||+++...+...... + .....++++++.+|
T Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lP 274 (660)
T PLN02430 196 KTYSWIDFLHMGKEN-PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLP 274 (660)
T ss_pred EEEEHHHHHHhhccC-CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCc
Confidence 122222211111 111122357899999999999999999999999998877654322 1 13567899999999
Q ss_pred hhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC----------------------
Q 012015 243 YFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---------------------- 300 (473)
Q Consensus 243 l~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------------- 300 (473)
++|.++....+.++..|+++++... ++..+++.|.++++|++.++|.+++.+.+...
T Consensus 275 l~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 353 (660)
T PLN02430 275 LAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKL 353 (660)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 9999998666677889999887654 77889999999999999999999987764210
Q ss_pred ---------CCCC---C----------C-CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC
Q 012015 301 ---------TDGY---D----------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (473)
Q Consensus 301 ---------~~~~---~----------l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 357 (473)
.... + + .++|.+++||+++++++.+.++ .++++.+++.||+||+++.++.... ..
T Consensus 354 ~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~-~~ 431 (660)
T PLN02430 354 AWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFP-DE 431 (660)
T ss_pred HHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeecc-cc
Confidence 0000 0 1 5799999999999999866555 4435789999999999876655322 22
Q ss_pred CCCCCCccccCCCcEEEEEcC-CCC-CCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEE
Q 012015 358 CRRWGSTGRLSAGLEAKIVDP-ETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLF 435 (473)
Q Consensus 358 ~~~~~~~G~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~ 435 (473)
....+++|+|.++++++++|. +.+ .+++.+..|||+|+|+.++.||+++|+.|.+.| .+|||+|||+|++|+||+|+
T Consensus 432 ~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~ 510 (660)
T PLN02430 432 MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLK 510 (660)
T ss_pred CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceeccceEEECCCCcEE
Confidence 234689999999999999872 333 455666789999999999999999999999988 68999999999999999999
Q ss_pred EEeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 436 IVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 436 ~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.||++|+||+ +|++|+|.+||.+|.+||.|.+|+|+|
T Consensus 511 i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G 549 (660)
T PLN02430 511 IIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYG 549 (660)
T ss_pred EEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEe
Confidence 99999999997 799999999999999999999999986
No 33
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-63 Score=497.40 Aligned_cols=418 Identities=27% Similarity=0.416 Sum_probs=361.6
Q ss_pred CHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHh
Q 012015 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (473)
Q Consensus 39 ~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 118 (473)
.+.+.+.+.++.+ ||++|++++ ++.+||+||.++++++|+.|+++.|+++|++|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 3 GIAYWIEKRAYLH----PDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred cHHHHHHHHHHHC----CCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 5788899999998 999999987 8999999999999999999985479999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC-----CeEEEEcCCChhhhhcccCCCccccccccCCCC
Q 012015 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (473)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (473)
|++++|+++.++.+++..+++.++++++++++.....+.+.. ...+.+. ++....... .........++
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 150 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT--SLKEIEDRK----IDNFVEKNESA 150 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec--chHhhhccC----CCCCCCCCCCC
Confidence 999999999999999999999999999999987766554321 1222222 222222211 11122345678
Q ss_pred EEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHH
Q 012015 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKM 272 (473)
Q Consensus 194 ~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~ 272 (473)
+++++|||||||.||+|.++|+++..........+ ....++++++.+|++|.+++ ...+.++..|+++++.+.+++..
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 229 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHH
Confidence 99999999999999999999999977665555555 57788999999999999998 55678999999999988899999
Q ss_pred HHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccc
Q 012015 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (473)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 352 (473)
+++.++++++|++.++|++++.++........+++++|.+++||+++++++.+.+.+. ++++.+.||+||++..++..
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~ 307 (496)
T PRK06839 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFML 307 (496)
T ss_pred HHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEec
Confidence 9999999999999999999999998876666778999999999999999999999986 79999999999998765443
Q ss_pred cCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCC
Q 012015 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (473)
Q Consensus 353 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 432 (473)
.........+++|+|+++++++|+| +.++.++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||+++++++|
T Consensus 308 ~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g 385 (496)
T PRK06839 308 SEEDARRKVGSIGKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDG 385 (496)
T ss_pred ccccccccCCCCcccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCC
Confidence 2222334567999999999999999 567779999999999999999999999999988776 68999999999999999
Q ss_pred cEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 433 FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 433 ~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++.||.+|+||.+|.+|+|.+||++|.++|+|.+|+|+|
T Consensus 386 ~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 426 (496)
T PRK06839 386 FVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG 426 (496)
T ss_pred cEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99999999999999999999999999999999999999975
No 34
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-63 Score=515.32 Aligned_cols=412 Identities=21% Similarity=0.277 Sum_probs=347.3
Q ss_pred CCHHHHhcccccC--CCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 38 ISAVDYVSSLRAT--LPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 38 ~~l~~~~~~~~~~--~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
.|+.+++.+.++. + ||++|+++. ..+||+||.++++++|+.|.+ .|+++|++|+|+++|+++++++++||
T Consensus 4 ~~~~~~~~~~a~~~~~----pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~ 75 (705)
T PRK06060 4 GNLAGLLAEQASEAGW----YDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLAC 75 (705)
T ss_pred cCHHHHHHHHHhhccC----CCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3788888887765 5 899999864 379999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEE
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (473)
+++|++++|++|.++.+++.+++++++++++|++......+.... .+ . ....................+++++
T Consensus 76 ~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~--~---~~~~~~~~~~~~~~~~~~~~~~~~a 148 (705)
T PRK06060 76 LARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR--VA--E---AAELMSEAARVAPGGYEPMGGDALA 148 (705)
T ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc--cc--h---hhhhhhhccccCCCCCCCCCCCCeE
Confidence 999999999999999999999999999999999876655443211 11 0 1111111000001111223467899
Q ss_pred EEEccCCCCCCcchhhhcHHHHHHHHHHhhc-cCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHH
Q 012015 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKM 272 (473)
Q Consensus 196 ~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~ 272 (473)
+++|||||||.||+|.++|+++...+..... .+ ...+.+++++..|++|.+++ ..++.++..|+++++.+ .+++..
T Consensus 149 ~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~ 227 (705)
T PRK06060 149 YATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEA 227 (705)
T ss_pred EEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHH
Confidence 9999999999999999999999887765432 33 56788999999999998887 56788999999999986 478889
Q ss_pred HHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccc
Q 012015 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (473)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 352 (473)
+...++++++|+++++|+++.++++... ...++++|.+++||+++++++.+++.+.+++.++++.||+||++.++...
T Consensus 228 ~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 305 (705)
T PRK06060 228 AAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSN 305 (705)
T ss_pred HHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEec
Confidence 9999999999999999999999987543 23578999999999999999999999999778999999999998655432
Q ss_pred cCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCC
Q 012015 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (473)
Q Consensus 353 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 432 (473)
. ......+++|+|+++++++|+| +++++++.|+.|||+|+|+.++.||+++++.+. ..+|||+|||+|++++||
T Consensus 306 ~--~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG 379 (705)
T PRK06060 306 R--VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDG 379 (705)
T ss_pred c--CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCc
Confidence 1 1223456899999999999999 678999999999999999999999999998653 357999999999999999
Q ss_pred cEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 433 FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 433 ~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++++||.||+||++|++|+|.|||++|.+||.|.+|+|+|
T Consensus 380 ~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~ 420 (705)
T PRK06060 380 WVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVA 420 (705)
T ss_pred eEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99999999999999999999999999999999999999975
No 35
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-62 Score=492.06 Aligned_cols=423 Identities=28% Similarity=0.413 Sum_probs=364.6
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+++.+.+.+.++.+ |+++|+++. ++.+||.||.++++++|.+|.+ .|+++|++|+++++|+++++++++||++
T Consensus 2 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (497)
T PRK06145 2 FNLSASIAFHARRT----PDRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASY 74 (497)
T ss_pred ccHHHHHHHHHHHC----CCceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68899999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCC---hhhhhcccCCCccccccccCCCCE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE---FDSMTMSWNSKHELDRAKVCQSDV 194 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
+|++++|+++.++.+++.++++.+++++++++.+........ ...+.++... +..+.. .... ........++++
T Consensus 75 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 151 (497)
T PRK06145 75 LGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-TPKIVIDAAAQADSRRLAQ-GGLE-IPPQAAVAPTDL 151 (497)
T ss_pred cCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-cceEEecCcccchhHHHhc-cCCC-CCCCCCCCccce
Confidence 999999999999999999999999999999987765543211 1223333211 111110 0000 111223466889
Q ss_pred EEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHH
Q 012015 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMM 273 (473)
Q Consensus 195 ~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~ 273 (473)
++++|||||||.||+|.++|+++..........+ +...+++++..+|++|.+++ ...+.++..|+++++.+.+++..+
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 230 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAV 230 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHH
Confidence 9999999999999999999999987665554455 67888999999999999888 456788999999999988999999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccccccc
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 353 (473)
++.++++++|.+.++|+++..++........+++++|.+++||+++++++.+++.+.+++.++++.||+||++..++...
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 310 (497)
T PRK06145 231 LAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLME 310 (497)
T ss_pred HHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceecc
Confidence 99999999999999999999999876666667889999999999999999999999998889999999999988655433
Q ss_pred CCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCc
Q 012015 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (473)
Q Consensus 354 ~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~ 433 (473)
........+++|+|+++++++++| +++..++.|+.|||+++|+.++.||+++++.+.+.| .++||+|||+|++++||+
T Consensus 311 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~ 388 (497)
T PRK06145 311 AGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGF 388 (497)
T ss_pred CccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCc
Confidence 222334557899999999999999 678899999999999999999999999999998888 579999999999999999
Q ss_pred EEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 434 LFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 434 l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++||.||+||++|++++|.+||.+|.++|+|.+++|++
T Consensus 389 l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 428 (497)
T PRK06145 389 LYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIG 428 (497)
T ss_pred EEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999975
No 36
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-62 Score=497.73 Aligned_cols=428 Identities=23% Similarity=0.302 Sum_probs=347.5
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
+.++.+.+...++++ |+++|+++...++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||+
T Consensus 13 ~~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~e~~~~~lA~~ 87 (540)
T PRK05857 13 PSTVLDRVFEQARQQ----PEAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNGPETYLSVLACA 87 (540)
T ss_pred CcchHHHHHHHHhhC----CCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 368999999999999 999999875445789999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCeEEEEcCCChhhhhc-ccCCCccccccccC
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDSPEFDSMTM-SWNSKHELDRAKVC 190 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 190 (473)
++|++++|++++++.+++.++++.++++++|+++........+ ....+.++......... ..............
T Consensus 88 ~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (540)
T PRK05857 88 KLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQG 167 (540)
T ss_pred HcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCC
Confidence 9999999999999999999999999999999987653221111 11223332211100000 00000011122345
Q ss_pred CCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc---cCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC
Q 012015 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA---SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (473)
Q Consensus 191 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~ 267 (473)
.+++++++|||||||.||+|.++|+++.+....... .......+++.++.+|++|..++...+.++..|+++++ .+
T Consensus 168 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~~ 246 (540)
T PRK05857 168 SEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-GG 246 (540)
T ss_pred CCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEe-cC
Confidence 688999999999999999999999999876543221 11134567889999999999999878899999998765 45
Q ss_pred CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccc
Q 012015 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTA 347 (473)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 347 (473)
.++..+++.|+++++|+++++|+++..|.........+++++|.+++||++++....+ +.+.+ ++++.+.||+||++.
T Consensus 247 ~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~ 324 (540)
T PRK05857 247 ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGC 324 (540)
T ss_pred CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCc
Confidence 6889999999999999999999999999887666667789999999999999987775 45565 799999999999986
Q ss_pred ccccccCCCC---CCCCCCccccCCCcEEEEEcCCCCCCC-----CCCCccEEEEecCccccccCCCccccccccCCCCe
Q 012015 348 GVFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSL-----PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (473)
Q Consensus 348 ~~~~~~~~~~---~~~~~~~G~p~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 419 (473)
.......... ..+.+++|+|++|++++|+|++...++ +.|+.|||+++|+.++.||+++++.+.+.| .+||
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~ 403 (540)
T PRK05857 325 TALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGW 403 (540)
T ss_pred eeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCc
Confidence 5433221111 123578999999999999995433333 347889999999999999999999999888 5899
Q ss_pred eecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 420 ~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+|||+|++|++|++++.||.||+||++|++|+|.|||.+|..||.|.+|+|+|
T Consensus 404 ~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 457 (540)
T PRK05857 404 VNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYE 457 (540)
T ss_pred eeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999999999999999999999999999999975
No 37
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.1e-62 Score=504.64 Aligned_cols=423 Identities=22% Similarity=0.280 Sum_probs=342.6
Q ss_pred CCCCHHHHhcccccCCCCCCCCCcEEEECC-C--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH
Q 012015 36 APISAVDYVSSLRATLPWRDDDTVALINSV-T--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (473)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~-~--~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~ 112 (473)
.+.|+.++|.+.++++ |+++|+++.. . .+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++
T Consensus 37 ~~~~l~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 37 YPRRLTDRLVHWAQEA----PDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred cCccHHHHHHHHHHHC----CCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHH
Confidence 3479999999999998 9999998742 1 2689999999999999999998 89999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCC-----HHHHHHHHhhcCCeEEEEccc--hHHHHhc---CCCeEEEEcC-------CChhhhh
Q 012015 113 FSLLSLGVIISPANPVNT-----ESEISRQIQLSNPVIAFATSS--VVHKLAK---LKHRTILIDS-------PEFDSMT 175 (473)
Q Consensus 113 lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~--~~~~~~~---~~~~~~~~~~-------~~~~~~~ 175 (473)
|||+++|++++|++|.++ .+++.+++++++++++++++. ....+.. ....++..+. ..+..+.
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALL 191 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHh
Confidence 999999999999999998 799999999999999999754 2222221 1223333321 2233333
Q ss_pred cccCCCc-cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC-CCCCcEEEEecChhhHHhH-HHH
Q 012015 176 MSWNSKH-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGL-FFC 252 (473)
Q Consensus 176 ~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~g~-~~~ 252 (473)
....... ........++++++|+|||||||.||||++||+++..........+.. ....+++++.+|++|.+++ ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 192 ATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred ccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHH
Confidence 2211000 011123456899999999999999999999999999887766555422 1256899999999999987 567
Q ss_pred HHHhhhcCeEEEecC-CCH---HHHHHHHHHcccceEEecHHHHHHHhcCCCC----CCCCCCCceEEEecCCCCCHHHH
Q 012015 253 FRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTI 324 (473)
Q Consensus 253 l~~l~~G~~~v~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~lr~v~~~G~~l~~~~~ 324 (473)
+.++..|+++++.+. +++ ..+++.++++++|+++++|+++..|++.... ....++++|.+++||+++++++.
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 789999999998763 443 4678889999999999999999988764321 23347899999999999999999
Q ss_pred HHHHHh----C-CCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCcc
Q 012015 325 MAFASK----F-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (473)
Q Consensus 325 ~~~~~~----~-~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 399 (473)
+++.+. + .++++++.||+||++.+++.... .....+++|+|++|++++++| + |..|||+++|+.+
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~--~~~~~~svG~p~pg~~v~i~d-~-------~~~GEi~vrg~~v 421 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG--PLSRAGNIGLPAPGCEVKLVP-V-------GGKLEVRVKGPNV 421 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEeccc--ccCCCCcccCccCCcEEEEec-C-------CCCcEEEEecCcc
Confidence 999875 3 24789999999999876654322 234568999999999999998 2 3469999999999
Q ss_pred ccccCCCccccccccCCCCeeecCceEEE----ccCCcEEEEeccCCeEEE-cCeeeC--hHHHHHHHhcCCCcceEEEc
Q 012015 400 MKGYVGEPEVTSATLLPDGWMRTGDLCYI----DEDGFLFIVDRLKDLIKY-KGYQVA--PAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~~TgD~~~~----~~~g~l~~~GR~~d~i~~-~G~~v~--~~~IE~~l~~~~~v~~~~vv 472 (473)
+.||+++|+.+.+.|..+|||+|||+|++ |+||+|+++||+||+||+ +|++|+ +.|||.++.+||.|++|+|+
T Consensus 422 ~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~ 501 (614)
T PRK08180 422 TPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVIT 501 (614)
T ss_pred chhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEE
Confidence 99999999999999988999999999999 468999999999999986 798777 77888999999999999998
Q ss_pred C
Q 012015 473 P 473 (473)
Q Consensus 473 g 473 (473)
|
T Consensus 502 g 502 (614)
T PRK08180 502 G 502 (614)
T ss_pred c
Confidence 6
No 38
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-63 Score=509.45 Aligned_cols=439 Identities=24% Similarity=0.322 Sum_probs=351.5
Q ss_pred ceecCCCCCCCCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCC
Q 012015 20 KTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRL 92 (473)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~g~ 92 (473)
|.|+.+.+....-.+....|+.+++.+.++.+ |+++|+++.. ..+.+||+||.++++++|++|.+ . +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~----~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~ 76 (631)
T PRK07769 3 MAFHNPFDVNGKIRFPPNTNLVRHVERWAKVR----GDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-T 76 (631)
T ss_pred cccCCcccccccccccccCCHHHHHHHHHHhC----CCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-c
Confidence 44555554443333344579999999999888 9999998631 12689999999999999999988 5 8
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecC-CCCCC--HHHHHHHHhhcCCeEEEEccchHHHHhcC----C----C
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----H 161 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~ 161 (473)
++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.++++++++++++++++....+.+. . .
T Consensus 77 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 156 (631)
T PRK07769 77 KPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERP 156 (631)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999 45554 67899999999999999988765543321 1 1
Q ss_pred eEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 012015 162 RTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 241 (473)
.++.++.. .... . . ........++++++++|||||||.||||+++|+++..........+ ....++++++.+
T Consensus 157 ~~~~~~~~--~~~~---~-~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~ 228 (631)
T PRK07769 157 RVIAVDAV--PDEV---G-A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-EGQEGDRGVSWL 228 (631)
T ss_pred eEEEcccc--cccc---c-c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-CCCCcceEEEeC
Confidence 22222211 0000 0 0 1111234568999999999999999999999999998877666655 677889999999
Q ss_pred ChhhHHhHHHHHHHhhhcCeEEEecC--C--CHHHHHHHHHHccc---ceEEecHHHHHHHhcC---CC--CCCCCCCCc
Q 012015 242 PYFHIYGLFFCFRAAALMETAVVMQR--F--DLKMMLKAVEEFRV---THAAVTPPIVVAMSKG---GS--TDGYDLSSL 309 (473)
Q Consensus 242 pl~~~~g~~~~l~~l~~G~~~v~~~~--~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~---~~--~~~~~l~~l 309 (473)
|++|.+|+...+.+++.|+++++..+ + ++..+++.+.++++ +.+..+|+++..+... .. ....+++++
T Consensus 229 Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~l 308 (631)
T PRK07769 229 PFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNV 308 (631)
T ss_pred CCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhhe
Confidence 99999999777888889999988853 4 88999999999886 7888999887766542 11 124568899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCC-----CCeEEeecCCcccccccccccCCCC-------------------------CC
Q 012015 310 ETVACGAAPLGKDTIMAFASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CR 359 (473)
Q Consensus 310 r~v~~~G~~l~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~-------------------------~~ 359 (473)
|.+++||+++++++.++|.+.|+ ...+++.||+||++..++....... ..
T Consensus 309 r~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 388 (631)
T PRK07769 309 KGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAV 388 (631)
T ss_pred eeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCce
Confidence 99999999999999999999872 2469999999998765554221110 00
Q ss_pred CCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-----------------CCeeec
Q 012015 360 RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------------DGWMRT 422 (473)
Q Consensus 360 ~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------------~~~~~T 422 (473)
...++|+|.++.+++|+|++++++++.|+.|||+|+|++++.||+++++.|.+.|.. +|||+|
T Consensus 389 ~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~T 468 (631)
T PRK07769 389 AQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRT 468 (631)
T ss_pred eEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeec
Confidence 124789999999999999778999999999999999999999999999999888742 489999
Q ss_pred CceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhc-CCCcce--EEEcC
Q 012015 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLS-HREVAD--AAVIP 473 (473)
Q Consensus 423 gD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~-~~~v~~--~~vvg 473 (473)
||+|+++ ||+|+|+||.||+||++|++|+|.|||.+|.+ ||.|.+ |+|+|
T Consensus 469 GDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~ 521 (631)
T PRK07769 469 GDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFS 521 (631)
T ss_pred cccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEE
Confidence 9999994 99999999999999999999999999999986 899998 77764
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-62 Score=504.41 Aligned_cols=432 Identities=21% Similarity=0.287 Sum_probs=348.0
Q ss_pred CCCCCHH-HHhcccccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH
Q 012015 35 DAPISAV-DYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (473)
Q Consensus 35 ~~~~~l~-~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~ 109 (473)
...+|+. +.+.++++.+ |+++|+++. ...+++||+||.++++++|+.|++ +|+++||+|+++++|+++++
T Consensus 49 ~~~~n~~~~~l~~~~~~~----p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 123 (629)
T PRK10524 49 GGRTNLCHNAVDRHLAKR----PEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEAA 123 (629)
T ss_pred CcEeeHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 4556764 4555666667 999999873 124789999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH---------HHH----hc---CCCeEEEEcCC----
Q 012015 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AK---LKHRTILIDSP---- 169 (473)
Q Consensus 110 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~---~~~~~~~~~~~---- 169 (473)
++++||+++|++++|+++.++.+++.+++++++++++|+++... +.+ .. ....+++++..
T Consensus 124 ~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 203 (629)
T PRK10524 124 FAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM 203 (629)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 99999999999999999999999999999999999999875421 111 11 12234443321
Q ss_pred --------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 012015 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 241 (473)
.+.++..... ...........+++++++|||||||.||||.++|++++...........+..+++++++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 282 (629)
T PRK10524 204 ARVAGRDVDYATLRAQHL-GARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCAS 282 (629)
T ss_pred CcccCCcccHHHHHhcCC-CCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcC
Confidence 1111111100 0011112235688999999999999999999999988655444333222677889999999
Q ss_pred ChhhHHhH-HHHHHHhhhcCeEEEec----CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEe
Q 012015 242 PYFHIYGL-FFCFRAAALMETAVVMQ----RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVAC 314 (473)
Q Consensus 242 pl~~~~g~-~~~l~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~ 314 (473)
|+.|..+. +.++.++..|+++++.+ ..++..+++.|+++++|+++++|++++.|.+... ....+++++|.+++
T Consensus 283 ~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~ 362 (629)
T PRK10524 283 DIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFL 362 (629)
T ss_pred CCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEE
Confidence 99998876 66888999999999875 3578999999999999999999999999887543 23456889999999
Q ss_pred cCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccC--CCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEE
Q 012015 315 GAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGEL 392 (473)
Q Consensus 315 ~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel 392 (473)
||+++++++.+++.+.+ ++++++.||+||++..+..... .......+++|+|+++++++|+|+++|++++.|+.|||
T Consensus 363 ~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel 441 (629)
T PRK10524 363 AGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVL 441 (629)
T ss_pred eCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEE
Confidence 99999999999999988 7899999999999854332211 11223457899999999999999548999999999999
Q ss_pred EEecC---ccccccCCCccccccccC---CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCc
Q 012015 393 SIRGP---TIMKGYVGEPEVTSATLL---PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREV 466 (473)
Q Consensus 393 ~v~~~---~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v 466 (473)
+++|+ +++.||+++++.+.+.+. .++||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||.|
T Consensus 442 ~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V 521 (629)
T PRK10524 442 VIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAV 521 (629)
T ss_pred EEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCc
Confidence 99997 578899999887765442 468999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcC
Q 012015 467 ADAAVIP 473 (473)
Q Consensus 467 ~~~~vvg 473 (473)
.+|+|+|
T Consensus 522 ~e~~vvg 528 (629)
T PRK10524 522 AEVAVVG 528 (629)
T ss_pred ceEEEEc
Confidence 9999985
No 40
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.6e-62 Score=487.77 Aligned_cols=414 Identities=28% Similarity=0.392 Sum_probs=358.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+|+.+.|.++++.+ ||++|+++. ++.+||+||.++++++|++|.+ .|+++||+|+++++|+.++++++|||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (483)
T PRK03640 2 ETMPNWLKQRAFLT----PDRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQ 74 (483)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 197 (473)
+|++++|+++..+.+++..+++.++++++++++........... ..++++....... .........++++++
T Consensus 75 ~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~a~i 146 (483)
T PRK03640 75 LGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-------VKFAELMNGPKEE-AEIQEEFDLDEVATI 146 (483)
T ss_pred CCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-------ccHHHHhhccccc-CCCCCCCCCCCeEEE
Confidence 99999999999999999999999999999998876554432110 0123222211111 112223456889999
Q ss_pred EccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHH
Q 012015 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (473)
Q Consensus 198 ~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i 277 (473)
+|||||||.||+|.++|+++..........+ +..+++++++.+|++|.+++..++.++..|+++++.+.+++..+++.+
T Consensus 147 ~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 225 (483)
T PRK03640 147 MYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLL 225 (483)
T ss_pred EeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHH
Confidence 9999999999999999999988776666555 678999999999999999997788999999999999999999999999
Q ss_pred HHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC
Q 012015 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (473)
Q Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 357 (473)
+++++|++.++|+++..|.+..... ....++|.+++||+++++++.+.+++. ++++++.||+||++..+........
T Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~ 302 (483)
T PRK03640 226 QTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDA 302 (483)
T ss_pred HHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccc
Confidence 9999999999999999998764433 234689999999999999999988875 8999999999998765443222223
Q ss_pred CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEE
Q 012015 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (473)
Q Consensus 358 ~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~ 437 (473)
....+++|+|++++++++.| + +.+++.|+.|||+++|+.++.||+++++.+.+.| .++||+|||++++++||++++.
T Consensus 303 ~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~ 379 (483)
T PRK03640 303 LTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVL 379 (483)
T ss_pred cccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEe
Confidence 34568999999999999998 3 4789999999999999999999999999998887 6899999999999999999999
Q ss_pred eccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 438 DRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 438 GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+||++|.+|.+|++.+||.++.+++.|.+++|++
T Consensus 380 GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~ 415 (483)
T PRK03640 380 DRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVG 415 (483)
T ss_pred ecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999999999999874
No 41
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-62 Score=496.78 Aligned_cols=425 Identities=24% Similarity=0.373 Sum_probs=356.8
Q ss_pred CCCHHH-Hhccccc-CCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH
Q 012015 37 PISAVD-YVSSLRA-TLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (473)
Q Consensus 37 ~~~l~~-~~~~~~~-~~~~~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~ 112 (473)
.+|+.. .+.+.++ .. |+++|+++.. ..+++||+||.++++++|..|.+ .|+++||+|+++++|++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGR----KDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCC----CCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHH
Confidence 356664 5555555 35 8999998742 34789999999999999999998 89999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc--C-CC-eEEEEcCC--------ChhhhhcccCC
Q 012015 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK--L-KH-RTILIDSP--------EFDSMTMSWNS 180 (473)
Q Consensus 113 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~-~~-~~~~~~~~--------~~~~~~~~~~~ 180 (473)
+||+++|++++|+++.++.+++.++++.+++++++++......... . .. .++.++.. ++.+.......
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASD 195 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCC
Confidence 9999999999999999999999999999999999998776543321 1 11 23333321 12222221111
Q ss_pred CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhc
Q 012015 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (473)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G 259 (473)
........++++++++|||||||.||+|.++|++++.........+ ...+++++++..|++|.+++ ..++.++..|
T Consensus 196 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 196 --EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred --cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 1122234567899999999999999999999999998877666665 67788999999999999887 6788999999
Q ss_pred CeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeE
Q 012015 260 ETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (473)
Q Consensus 260 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~ 336 (473)
+++++.. .+++..+++.|+++++|+++++|++++.|.+... ....+++++|.+++||+++++++.+++++.+ +.++
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i 351 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPI 351 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCe
Confidence 9999875 5899999999999999999999999999987643 2344678999999999999999999999988 7899
Q ss_pred EeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEec--CccccccCCCcccccccc
Q 012015 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG--PTIMKGYVGEPEVTSATL 414 (473)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~ 414 (473)
++.||+||++..++.... ......+++|+|+++++++|+| +++.++++|+.|||+++| +.++.||+++++.+.+.|
T Consensus 352 ~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~ 429 (570)
T PRK04319 352 HDNWWMTETGGIMIANYP-AMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF 429 (570)
T ss_pred EeceeecccCCEEEecCC-CCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhh
Confidence 999999999876554322 2233567999999999999999 678889999999999997 889999999999999888
Q ss_pred CCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 415 LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 415 ~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
. +|||+|||+++++++|+++++||.||+||.+|++|+|.+||++|.++|.|.+++|+|
T Consensus 430 ~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g 487 (570)
T PRK04319 430 A-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIG 487 (570)
T ss_pred c-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceec
Confidence 4 899999999999999999999999999999999999999999999999999999875
No 42
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1e-61 Score=490.29 Aligned_cols=425 Identities=27% Similarity=0.368 Sum_probs=361.6
Q ss_pred CCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
+..++.+++.+.++.+ |+++|+++. ++.+||+||.++++++|..|.+ .|+++|++|+++++|+.+++++++||
T Consensus 21 ~~~~l~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~ 93 (527)
T TIGR02275 21 QDKPLTDILRDQAARY----PDAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFAL 93 (527)
T ss_pred cCCcHHHHHHHHHHHC----CCceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 3468999999999988 999999998 8899999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH--------HHHhc-C-CCeEEEEcC-C----ChhhhhcccCC
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLAK-L-KHRTILIDS-P----EFDSMTMSWNS 180 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~~-~-~~~~~~~~~-~----~~~~~~~~~~~ 180 (473)
+++|++++++++..+.+++.++++.+++++++++.... ..+.. . ....+.+.. . ..........
T Consensus 94 ~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 172 (527)
T TIGR02275 94 LKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPA- 172 (527)
T ss_pred HHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcC-
Confidence 99999999999999999999999999999999986531 11111 1 112222211 1 1111111110
Q ss_pred CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHH--HHHHHhhh
Q 012015 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAAL 258 (473)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~l~~l~~ 258 (473)
. ........++++++++|||||||.||+|.++|+++...+....... ....++++++.+|++|.+++. ..+.++..
T Consensus 173 ~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 173 E-PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred c-cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 0 1112244578999999999999999999999999998887766665 678899999999999999884 47888999
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
|+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++++.+++.+.+ +.++++
T Consensus 251 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~ 329 (527)
T TIGR02275 251 GGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQ 329 (527)
T ss_pred CCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEe
Confidence 9999998888999999999999999999999999999887766667788999999999999999999999988 899999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccC-CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD 417 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 417 (473)
.||+||++..... .........+++|+|+ ++..++++| +++++++.|+.|||+++|+.++.||+++++.+.+.|+.+
T Consensus 330 ~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~d 407 (527)
T TIGR02275 330 VFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAE 407 (527)
T ss_pred eeccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcC
Confidence 9999996543322 1111222346899999 488999999 778999999999999999999999999999999999889
Q ss_pred CeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 418 ~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|||+|||+|+++++|++++.||.||+|+++|++|+|.+||++|.++|+|.+|+|+|
T Consensus 408 g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 463 (527)
T TIGR02275 408 GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVS 463 (527)
T ss_pred CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999985
No 43
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-62 Score=491.93 Aligned_cols=424 Identities=29% Similarity=0.444 Sum_probs=368.8
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.|.+.++.+ |+++|+++. ++++||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 5 ~~i~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 5 MTLPELLARAARRF----GDKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCe-EEEEcCC----------ChhhhhcccCCC
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP----------EFDSMTMSWNSK 181 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~----------~~~~~~~~~~~~ 181 (473)
+|++++|++++.+.+.+..+++++++++++++.......... ..+ ++..... .+.++......
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC-
Confidence 999999999999999999999999999999988766544321 111 2222211 22333222111
Q ss_pred ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcC
Q 012015 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (473)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~ 260 (473)
.........+++++++|||||||.||+|.++|+++..........+ ...+++++++.+|++|.+++ ..++.++..|+
T Consensus 157 -~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 157 -AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred -CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 1122345678899999999999999999999999998887766666 68889999999999999998 55789999999
Q ss_pred eEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCC-eEEee
Q 012015 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV-VLVQA 339 (473)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~-~~~~~ 339 (473)
++++.+.+++..+++.|+++++|++.++|.++..+.+........++++|.+++||+++++++.+.+.+.+ +. .+++.
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 313 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTG 313 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeE
Confidence 99998888999999999999999999999999999998776666789999999999999999999999998 55 89999
Q ss_pred cCCcccccccccccCCCC-CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCC
Q 012015 340 YGLTESTAGVFRTVGPDE-CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (473)
Q Consensus 340 yG~tE~~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 418 (473)
||+||+++++........ ....+++|.|+++++++|+| +++++++.|+.|||+++|+.++.||++++..+...+..++
T Consensus 314 YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 392 (513)
T PRK07656 314 YGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADG 392 (513)
T ss_pred EccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCC
Confidence 999999877665332211 12257899999999999999 6799999999999999999999999999999988886689
Q ss_pred eeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 419 ~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+|||+|+++++|+++++||.||++|++|.++++.+||++|.++++|.+|+|++
T Consensus 393 ~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 447 (513)
T PRK07656 393 WLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIG 447 (513)
T ss_pred ceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999874
No 44
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-61 Score=490.44 Aligned_cols=427 Identities=27% Similarity=0.411 Sum_probs=366.0
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
...+|+.+.+...++.+ |+++|+++. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++|
T Consensus 14 ~~~~n~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~a 86 (542)
T PRK07786 14 ARRQNWVNQLARHALMQ----PDAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVLA 86 (542)
T ss_pred ccccCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 45589999999999998 999999988 7899999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CC-eEEEEcC------CChhhhhcccCCCc
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDS------PEFDSMTMSWNSKH 182 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~------~~~~~~~~~~~~~~ 182 (473)
|+++|++++|+++..+.+++..+++.+++++++++......+... .. .++..+. ..++++......
T Consensus 87 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (542)
T PRK07786 87 ANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP-- 164 (542)
T ss_pred HHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC--
Confidence 999999999999999999999999999999999988766554321 11 1222221 223333222111
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeE
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~ 262 (473)
.........+++++++|||||||.||+|.++|+++...+......+....+.+++++.+|++|.+|+..++.++..|+++
T Consensus 165 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~ 244 (542)
T PRK07786 165 AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPT 244 (542)
T ss_pred CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEE
Confidence 11122344578999999999999999999999999988877666552226788999999999999998889999999999
Q ss_pred EEec--CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 263 VVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 263 v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
++.+ .+++..+++.++++++|.++++|+++..+.......... .++|.+++||+++++++.+++.+.+++.++++.|
T Consensus 245 v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~Y 323 (542)
T PRK07786 245 VIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAF 323 (542)
T ss_pred EEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeee
Confidence 9865 579999999999999999999999999998875543333 3699999999999999999999999899999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCee
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 420 (473)
|+||++.+.+...........+++|+|++++.++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.| .++||
T Consensus 324 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~ 401 (542)
T PRK07786 324 GQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWF 401 (542)
T ss_pred cccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCcc
Confidence 9999987655433322334557899999999999999 778999999999999999999999999999998888 57999
Q ss_pred ecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 421 ~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|||+++++++|+++++||.||+||++|.+|++.+||++|.++|.|.+|+|+|
T Consensus 402 ~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 454 (542)
T PRK07786 402 HSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIG 454 (542)
T ss_pred cccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 99999999999999999999999999999999999999999999999999975
No 45
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-61 Score=493.85 Aligned_cols=426 Identities=31% Similarity=0.493 Sum_probs=360.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.+.++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 32 ~~l~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 104 (573)
T PRK05605 32 TTLVDLYDNAVARF----GDRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDRVAIVLPNCPQHIVAFYAVLR 104 (573)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEcC------------------------
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDS------------------------ 168 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~------------------------ 168 (473)
+|++++|++|.++.+++.+++++++++++|+++.....+.++ ... ++.++.
T Consensus 105 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
T PRK05605 105 LGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARA 184 (573)
T ss_pred cCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987755444321 111 111110
Q ss_pred ---------CChhhhhcccCCC--ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC-CCCCcE
Q 012015 169 ---------PEFDSMTMSWNSK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAV 236 (473)
Q Consensus 169 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~-~~~~~~ 236 (473)
..+.++....... ..........+++++++|||||||.||+|.++|+++...+......... ...+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 264 (573)
T PRK05605 185 ALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPER 264 (573)
T ss_pred ccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcE
Confidence 0111111110000 0011122456889999999999999999999999998877654433322 234789
Q ss_pred EEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEec
Q 012015 237 MLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG 315 (473)
Q Consensus 237 ~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~ 315 (473)
+++.+|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|++.++|++++.|.+.......+++++|.+++|
T Consensus 265 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 344 (573)
T PRK05605 265 VLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSG 344 (573)
T ss_pred EEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEEC
Confidence 9999999999998 556778999999999988999999999999999999999999999998877667778999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCC-CCCCCCCCccEEEE
Q 012015 316 AAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSI 394 (473)
Q Consensus 316 G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~-~~~~~~g~~Gel~v 394 (473)
|+++++++.+.+.+.+ +..+++.||+||+++++..... ......+++|+|+++++++|+|+++ +.+++.|+.|||++
T Consensus 345 g~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 345 AMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPM-SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLV 422 (573)
T ss_pred CCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCc-ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEE
Confidence 9999999999999887 7889999999999877655322 2223457899999999999999666 68899999999999
Q ss_pred ecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 395 RGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 395 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|+.++.||+++++.+.+.| .+|||+|||+|+++++|++++.||.||++|.+|++|+|.+||+++.+++.|.+|+|+|
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~ 500 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVG 500 (573)
T ss_pred ecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEe
Confidence 99999999999999998888 4679999999999999999999999999999999999999999999999999999975
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.8e-61 Score=487.75 Aligned_cols=421 Identities=28% Similarity=0.369 Sum_probs=361.7
Q ss_pred CCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
.+.++.+++.+.++.+ ||++|+++. ++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||
T Consensus 19 ~~~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~ 91 (542)
T PRK06155 19 SERTLPAMLARQAERY----PDRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGC 91 (542)
T ss_pred cccCHHHHHHHHHHHC----CCCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHH
Confidence 3378999999999999 999999987 8899999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC------CeEEEEcCCCh-------hhhhcccCCCc
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDSPEF-------DSMTMSWNSKH 182 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~~~~~ 182 (473)
+++|++++|+++.++.+++..+++++++++++++.+....+.... ..++.++.... .... ......
T Consensus 92 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 170 (542)
T PRK06155 92 AWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAP-LPPLDA 170 (542)
T ss_pred HHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhh-hcccCC
Confidence 999999999999999999999999999999999987766554321 12333332110 0000 000000
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeE
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~ 262 (473)
........++++++++|||||||.||+|.++|+++..........+ ...+.+++++.+|++|..++..++.++..|+++
T Consensus 171 ~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~ 249 (542)
T PRK06155 171 PAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDVLYTTLPLFHTNALNAFFQALLAGATY 249 (542)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceE
Confidence 1112233568899999999999999999999999987776666665 678899999999999999997789999999999
Q ss_pred EEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCC
Q 012015 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (473)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~ 342 (473)
++.+.+++..+++.|+++++|++.++|+++..+.+.........+++|.++.|| +++++.+++++.+ ++++++.||+
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~ 326 (542)
T PRK06155 250 VLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGS 326 (542)
T ss_pred EeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecc
Confidence 999999999999999999999999999999999887766666678899887665 5789999999988 8899999999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecC---ccccccCCCccccccccCCCCe
Q 012015 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLPDGW 419 (473)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~ 419 (473)
||++.++.... .....+++|.|.++++++|+| +++++++.|+.|||+++|+ +++.||+++++.+.+.| .++|
T Consensus 327 tE~~~~~~~~~---~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~ 401 (542)
T PRK06155 327 TETNFVIAVTH---GSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLW 401 (542)
T ss_pred cccCccccCCC---CCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCc
Confidence 99987655421 234567899999999999999 6799999999999999998 68999999999988877 6899
Q ss_pred eecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 420 ~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+|||+|++++||+++++||.+|+||++|.+|+|.+||++|.++|+|.+|+|+|
T Consensus 402 ~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 455 (542)
T PRK06155 402 FHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFP 455 (542)
T ss_pred EeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999999999999999999999999999999974
No 47
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.1e-61 Score=489.23 Aligned_cols=426 Identities=26% Similarity=0.381 Sum_probs=359.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~l 113 (473)
.++.+.+.+.++.+ |+++|+++. ..++.+||+||.++++++|.+|++ .|+++|++|+++++|+++++++++
T Consensus 22 ~~~~~~~~~~~~~~----p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~l 96 (538)
T TIGR03208 22 RTINDHFDAAVANC----PDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALYL 96 (538)
T ss_pred CcHHHHHHHHHHHC----CCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHH
Confidence 58999999999999 999999862 124789999999999999999998 899999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-----HHHh---c-C--CCeEEEEcCC---ChhhhhcccC
Q 012015 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA---K-L--KHRTILIDSP---EFDSMTMSWN 179 (473)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~---~-~--~~~~~~~~~~---~~~~~~~~~~ 179 (473)
||+++|++++|++|.++.+++.++++.++++++++++... .... . . ...++..+.. .++.......
T Consensus 97 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (538)
T TIGR03208 97 ACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPE 176 (538)
T ss_pred HHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhccc
Confidence 9999999999999999999999999999999999987542 1111 1 1 1123333321 2332221110
Q ss_pred --CCcc----ccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHH
Q 012015 180 --SKHE----LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (473)
Q Consensus 180 --~~~~----~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~ 252 (473)
.... .......++++++++|||||||.||+|.++|+++...+......+ ....++++++.+|++|..++ ..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~ 255 (538)
T TIGR03208 177 RDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-ELGGGDVILMASPMAHQTGFMYGL 255 (538)
T ss_pred cccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-CCCCCCeEEEeCCchhHHHHHHHH
Confidence 0000 011234568899999999999999999999999998887777666 57788999999999999887 668
Q ss_pred HHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012015 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (473)
Q Consensus 253 l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 332 (473)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++.+.+
T Consensus 256 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~- 334 (538)
T TIGR03208 256 MMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL- 334 (538)
T ss_pred HHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-
Confidence 8999999999998889999999999999999999999999998876554455688999999999999999999999988
Q ss_pred CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCcccccc
Q 012015 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (473)
Q Consensus 333 ~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (473)
++++++.||+||++.+..............++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.
T Consensus 335 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~- 412 (538)
T TIGR03208 335 GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNS- 412 (538)
T ss_pred CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCccccc-
Confidence 789999999999987765433221222245789999999999999 678999999999999999999999999998875
Q ss_pred ccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 413 ~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++.+|||+|||+|+++++|+++++||.||+|+.+|++|+|.+||++|.++|+|.+|+|++
T Consensus 413 -~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~ 472 (538)
T TIGR03208 413 -TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVA 472 (538)
T ss_pred -ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEe
Confidence 346899999999999999999999999999999999999999999999999999999975
No 48
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-62 Score=579.53 Aligned_cols=419 Identities=21% Similarity=0.310 Sum_probs=368.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++++ ||++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+|+++|++++++++|||++
T Consensus 3095 ~~~~~l~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~ 3167 (3956)
T PRK12467 3095 RLVHQLIEAQVART----PEAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLK 3167 (3956)
T ss_pred ccHHHHHHHHHHhC----CCcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHh
Confidence 68999999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|+++||++|.++.+++.++++++++++++++......+... ....+.++..... .. ..........++++++
T Consensus 3168 aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~a~ 3241 (3956)
T PRK12467 3168 AGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLN-----GY-SENNPSTRVMGENLAY 3241 (3956)
T ss_pred hCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhc-----cc-CCCCCcccCCCCceEE
Confidence 999999999999999999999999999999998776654322 2233333322111 00 1011223456789999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC--CCHHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~--~~~~~~~ 274 (473)
++|||||||.||||+++|+++.+.+......+ +..++++++..+|++|..++..++.+|..|+++++.+. +++..++
T Consensus 3242 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~ 3320 (3956)
T PRK12467 3242 VIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELW 3320 (3956)
T ss_pred EEEccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHH
Confidence 99999999999999999999999998877777 78899999999999999999999999999999999875 7899999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccC
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 354 (473)
+.|+++++|++.++|+++..+.+... ..+++++|.+++|||++++++.++|.+.++++.++|.||+||++..++....
T Consensus 3321 ~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 3398 (3956)
T PRK12467 3321 QAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKC 3398 (3956)
T ss_pred HHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEec
Confidence 99999999999999999999977532 3357899999999999999999999998888999999999999877664332
Q ss_pred CCC---CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCC-------eeecCc
Q 012015 355 PDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG-------WMRTGD 424 (473)
Q Consensus 355 ~~~---~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~-------~~~TgD 424 (473)
... .....++|+|++|++++|+| +.+++++.|+.|||+|+|+.+++||+++|+.|.++|..++ ||+|||
T Consensus 3399 ~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGD 3477 (3956)
T PRK12467 3399 GGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGD 3477 (3956)
T ss_pred ccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccch
Confidence 111 12236899999999999999 7899999999999999999999999999999999997654 699999
Q ss_pred eEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 425 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|++++||+|+++||+|++||++|++|+|.|||++|.++|+|.+|+|++
T Consensus 3478 l~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~ 3526 (3956)
T PRK12467 3478 LARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLA 3526 (3956)
T ss_pred hheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEE
Confidence 9999999999999999999999999999999999999999999999974
No 49
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-62 Score=501.06 Aligned_cols=428 Identities=23% Similarity=0.286 Sum_probs=341.5
Q ss_pred CCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC
Q 012015 30 DLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS 105 (473)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~ 105 (473)
++|+...+.++.+.|.+.++++ ||++|+++... .+.+||+||.++++++|++|.+ .|+++||+|+++++|+
T Consensus 41 ~~~~~~~~~~l~~~l~~~a~~~----pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~ 115 (624)
T PRK12582 41 RHPLGPYPRSIPHLLAKWAAEA----PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-LGLDPGRPVMILSGNS 115 (624)
T ss_pred CCCCCCcccCHHHHHHHHHHHC----CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCC
Confidence 3444455679999999999999 99999987421 2689999999999999999998 8999999999999999
Q ss_pred CcHHHHHHHHHHhCCeEecCCCCCCH-----HHHHHHHhhcCCeEEEEccch--HHHHh---cCCCeEEEEcCC------
Q 012015 106 IEIPILYFSLLSLGVIISPANPVNTE-----SEISRQIQLSNPVIAFATSSV--VHKLA---KLKHRTILIDSP------ 169 (473)
Q Consensus 106 ~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~--~~~~~---~~~~~~~~~~~~------ 169 (473)
++++++++||+++|++++|++|.++. +++.+++++++++++|+++.. ...+. ....+++.++..
T Consensus 116 ~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (624)
T PRK12582 116 IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIAS 195 (624)
T ss_pred HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCccccc
Confidence 99999999999999999999999875 899999999999999998642 11111 123344444321
Q ss_pred -ChhhhhcccCCC-ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCC---CCcEEEEecChh
Q 012015 170 -EFDSMTMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV---SPAVMLFTMPYF 244 (473)
Q Consensus 170 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~---~~~~~l~~~pl~ 244 (473)
.+.++....... .........++++++++|||||||.||||+++|+++........... ... ..++.++++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~~~~~~~l~~lPl~ 274 (624)
T PRK12582 196 IAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-PREPDPPPPVSLDWMPWN 274 (624)
T ss_pred ccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-cccCCCCCceEEEechHH
Confidence 233332211100 00011224568899999999999999999999999988776554433 222 257999999999
Q ss_pred hHHhH-HHHHHHhhhcCeEEEecC-CCH---HHHHHHHHHcccceEEecHHHHHHHhcCCCCC----CCCCCCceEEEec
Q 012015 245 HIYGL-FFCFRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD----GYDLSSLETVACG 315 (473)
Q Consensus 245 ~~~g~-~~~l~~l~~G~~~v~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l~~lr~v~~~ 315 (473)
|.+++ ..++.++..|+++++.+. +++ ..+++.++++++|+++++|+++..|.+..... ...++++|.+++|
T Consensus 275 h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~g 354 (624)
T PRK12582 275 HTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYG 354 (624)
T ss_pred HHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEec
Confidence 99998 556678899999988753 333 45677788999999999999999887643222 1246899999999
Q ss_pred CCCCCHHHHHHHHHhC----C-CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCcc
Q 012015 316 AAPLGKDTIMAFASKF----P-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (473)
Q Consensus 316 G~~l~~~~~~~~~~~~----~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~G 390 (473)
|+++++++.+++.+.+ + ++++++.||+||++.++.... ......+++|+|++|+++++++ .|+.|
T Consensus 355 Ga~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~--~~~~~~~svG~p~pg~~v~i~~--------~G~~G 424 (624)
T PRK12582 355 GATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTH--WDTERVGLIGLPLPGVELKLAP--------VGDKY 424 (624)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeeccc--CCCCCCCCCCcCCCCcEEEEcc--------CCCce
Confidence 9999999999999863 1 468999999999987655321 1224567999999999999864 46789
Q ss_pred EEEEecCccccccCCCccccccccCCCCeeecCceEEE-c---cCCcEEEEeccCCeEEE-cCeeeChHHHH--HHHhcC
Q 012015 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI-D---EDGFLFIVDRLKDLIKY-KGYQVAPAELE--HLLLSH 463 (473)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~-~---~~g~l~~~GR~~d~i~~-~G~~v~~~~IE--~~l~~~ 463 (473)
||+|+|+.++.||+++|+.+.+.|..+|||+|||+|++ | ++|+++++||+||+||+ +|++|+|.+|| .++.+|
T Consensus 425 El~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~ 504 (624)
T PRK12582 425 EVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACS 504 (624)
T ss_pred EEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcC
Confidence 99999999999999999999999988999999999998 4 46999999999999997 79999998885 688999
Q ss_pred CCcceEEEcC
Q 012015 464 REVADAAVIP 473 (473)
Q Consensus 464 ~~v~~~~vvg 473 (473)
|.|.+|+|+|
T Consensus 505 p~V~~a~VvG 514 (624)
T PRK12582 505 PVIHDAVVAG 514 (624)
T ss_pred cchheEEEEc
Confidence 9999999987
No 50
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.9e-61 Score=490.11 Aligned_cols=430 Identities=30% Similarity=0.423 Sum_probs=364.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.+.++.+ |+++|+++...++.+||+||.++++++|..|.+ .|+++||+|+++++|++++++++|||++
T Consensus 16 ~~l~~~l~~~~~~~----~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 16 QTIGQLLDRTAARY----PDREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 68999999999999 999999986557899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-----HHHh----cC---------------CCeEEEEcC-----
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL---------------KHRTILIDS----- 168 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~~---------------~~~~~~~~~----- 168 (473)
+|++++|++|..+.+++..+++.+++++++++.... ..+. ++ ...++..+.
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPG 170 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcc
Confidence 999999999999999999999999999999986532 1111 00 001222221
Q ss_pred -CChhhhhcccCC--Cc--cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 012015 169 -PEFDSMTMSWNS--KH--ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (473)
Q Consensus 169 -~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl 243 (473)
..+.++...... .. .........+++++++|||||||.||+|.++|+++..........+ .+.++++++..+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 249 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM-KLTEEDRLCIPVPL 249 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc-CCCCCceEEEecCc
Confidence 122322211100 00 0111234567899999999999999999999999998887776666 68889999999999
Q ss_pred hhHHhH-HHHHHHhhhcCeEEEe-cCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCH
Q 012015 244 FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (473)
Q Consensus 244 ~~~~g~-~~~l~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~ 321 (473)
+|.+++ ..++.++..|+++++. ..+++..+++.++++++|++.++|+++..++.........++++|.+++||+++++
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~ 329 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPI 329 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCH
Confidence 999988 5678899999999854 56899999999999999999999999988887765556678999999999999999
Q ss_pred HHHHHHHHhCCCCeEEeecCCcccccccccccCCC-CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccc
Q 012015 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (473)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 400 (473)
++.+++.+.++..++++.||+||++.+++...... ......++|+|+++++++|+|++++++++.|+.|||+|+|+.++
T Consensus 330 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~ 409 (559)
T PRK08315 330 EVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVM 409 (559)
T ss_pred HHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhh
Confidence 99999999986667999999999987665433221 22345799999999999999977699999999999999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.||+++++.+...|..++||+|||+|++++||+++++||.||++|++|++|++.+||++|.++++|.+|+|++
T Consensus 410 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 482 (559)
T PRK08315 410 KGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVG 482 (559)
T ss_pred hhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEe
Confidence 9999999999888878899999999999999999999999999999999999999999999999999999874
No 51
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-61 Score=488.51 Aligned_cols=426 Identities=26% Similarity=0.389 Sum_probs=350.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.+.+.++++ |+++|+++...++.+||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||++
T Consensus 16 ~~l~~~l~~~a~~~----p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (534)
T PRK05852 16 PRIADLVEVAATRL----PEAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASR 90 (534)
T ss_pred ccHHHHHHHHHHhC----CCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 58999999999988 999999886545789999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC--C--CeEEEEcCCC------hhh-hhcccCCCccccc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--K--HRTILIDSPE------FDS-MTMSWNSKHELDR 186 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~--~~~~~~~~~~------~~~-~~~~~~~~~~~~~ 186 (473)
+|++++|+++.++.+++.++++.++++++|++.......... . ...+.+.... +.. .............
T Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (534)
T PRK05852 91 ADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATST 170 (534)
T ss_pred cCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccc
Confidence 999999999999999999999999999999876533221110 0 0011111100 000 0000000000011
Q ss_pred cccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEe
Q 012015 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (473)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~ 265 (473)
.....++.++++|||||||.||+|.++|+++...+......+ ....++++++.+|++|.+++ ..++.++..|+++++.
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 249 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP 249 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC
Confidence 112246789999999999999999999999998887777666 67889999999999999998 5577888888888875
Q ss_pred c--CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCC--CCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecC
Q 012015 266 Q--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (473)
Q Consensus 266 ~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG 341 (473)
. .+++..+++.|+++++|.++++|+++..+.+..... ...++++|.++++|+++++++++.+.+.+ +.++++.||
T Consensus 250 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG 328 (534)
T PRK05852 250 ARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFG 328 (534)
T ss_pred CCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccC
Confidence 4 478999999999999999999999999998865432 34578999999999999999999999998 789999999
Q ss_pred CcccccccccccCC------CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccC
Q 012015 342 LTESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (473)
Q Consensus 342 ~tE~~~~~~~~~~~------~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 415 (473)
+||++..++..... ......+..|+ .++++++++| ++++++++|+.|||+++|+.+++||+++++.+.+.|
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~- 405 (534)
T PRK05852 329 MTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF- 405 (534)
T ss_pred ccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-
Confidence 99998765542211 01112233444 6999999999 678999999999999999999999999999999887
Q ss_pred CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 416 ~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.+|||+|||+|++|+||++++.||.+|+||.+|.+|+|.+||.+|.++|+|.+|+|+|
T Consensus 406 ~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g 463 (534)
T PRK05852 406 TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFG 463 (534)
T ss_pred cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 5799999999999999999999999999999999999999999999999999999985
No 52
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4.5e-61 Score=483.78 Aligned_cols=423 Identities=28% Similarity=0.405 Sum_probs=362.9
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.+++ .+ |+++|+.+. .++.+||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||++
T Consensus 3 ~~l~~~~~~~~-~~----~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~ 75 (504)
T PRK07514 3 NNLFDALRAAF-AD----RDAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLR 75 (504)
T ss_pred ccHHHHHHHHh-hC----CCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47999999999 77 999999874 37899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEcCCChhhhhcccC-CCccccccccCC
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPEFDSMTMSWN-SKHELDRAKVCQ 191 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 191 (473)
+|++++|+++.++.+++..+++.+++++++++....+.+... ... ++.++......+..... ............
T Consensus 76 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (504)
T PRK07514 76 AGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAPDDFETVPRGA 155 (504)
T ss_pred cCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcCcccCcccCCC
Confidence 999999999999999999999999999999998776654432 222 33333221111111000 000111233457
Q ss_pred CCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCH
Q 012015 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDL 270 (473)
Q Consensus 192 ~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~ 270 (473)
+++++++|||||||.||+|.++|+++..........+ ...+++++++.+|++|..++ +.++.++..|+++++.+.+++
T Consensus 156 ~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~ 234 (504)
T PRK07514 156 DDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDP 234 (504)
T ss_pred CCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCH
Confidence 8899999999999999999999999998887666655 67788999999999999998 567889999999999998999
Q ss_pred HHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccc
Q 012015 271 KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVF 350 (473)
Q Consensus 271 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 350 (473)
..+++.+ .++|++.++|.++.+++.........++++|.+++||+++++++.+.|.+.+ +.++++.||+||++....
T Consensus 235 ~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~ 311 (504)
T PRK07514 235 DAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTS 311 (504)
T ss_pred HHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeeccccccccccc
Confidence 9999999 3799999999999999887665566788999999999999999999999988 788999999999876544
Q ss_pred cccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEcc
Q 012015 351 RTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE 430 (473)
Q Consensus 351 ~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~ 430 (473)
... .......++|.|+++++++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.|..++||+|||++++++
T Consensus 312 ~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~ 389 (504)
T PRK07514 312 NPY--DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE 389 (504)
T ss_pred CCc--cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC
Confidence 321 222335689999999999999988999999999999999999999999999999999998899999999999999
Q ss_pred CCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 431 DGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 431 ~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|++++.||.||+||++|++|+|.+||.++.++++|.+++|++
T Consensus 390 ~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 432 (504)
T PRK07514 390 RGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIG 432 (504)
T ss_pred CccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999874
No 53
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-61 Score=496.69 Aligned_cols=426 Identities=21% Similarity=0.207 Sum_probs=343.5
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~ 111 (473)
+..+|+.+.+.++ .+ |+++|+++... .+++||+||.++++++|+.|++ .|+++||+|+++++|+++++++
T Consensus 83 ~~~~n~~~~~~~~--~~----~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~v~~ 155 (655)
T PRK03584 83 GARLNYAENLLRH--RR----DDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIPETVVA 155 (655)
T ss_pred CCEeeHHHHhhcc--CC----CCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 6668888888864 45 89999987521 2689999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH---------HHH----hcCC--CeEEEEcCC-------
Q 012015 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AKLK--HRTILIDSP------- 169 (473)
Q Consensus 112 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~~~--~~~~~~~~~------- 169 (473)
+|||+++|++++|+++.++.+++.++++.++++++|+++... ..+ .... ..++.++..
T Consensus 156 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (655)
T PRK03584 156 MLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAA 235 (655)
T ss_pred HHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCccccc
Confidence 999999999999999999999999999999999999976432 111 1111 123333211
Q ss_pred ------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHH-HHHhhccCCCCCCCcEEEEecC
Q 012015 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA-VASSFASSPKRVSPAVMLFTMP 242 (473)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~-~~~~~~~~~~~~~~~~~l~~~p 242 (473)
.+.++..... ...........+++++|+|||||||.||||+++|++++.. .......+ ...+++++++..+
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~~ 313 (655)
T PRK03584 236 ALPGALLWEDFLAPAE-AAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-DLGPGDRFFWYTT 313 (655)
T ss_pred ccCCcccHHHHhhccc-cCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-CCCCCCEEEEcCC
Confidence 1223222111 1111223345688999999999999999999999987644 33333344 6778899999999
Q ss_pred hhhHHhHHHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEecC
Q 012015 243 YFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGA 316 (473)
Q Consensus 243 l~~~~g~~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~G 316 (473)
+.|.... .++.++..|+++++.+. +++..+++.++++++|++.++|++++.+.+... ....++++||.+++||
T Consensus 314 ~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~G 392 (655)
T PRK03584 314 CGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTG 392 (655)
T ss_pred chHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEec
Confidence 9887543 46689999999999752 589999999999999999999999999876532 2345689999999999
Q ss_pred CCCCHHHHHHHHHhC-CCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEe
Q 012015 317 APLGKDTIMAFASKF-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (473)
Q Consensus 317 ~~l~~~~~~~~~~~~-~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 395 (473)
+++++++.+++.+.+ +++.+.+.||+||+++...... .......+++|.|.+|++++|+| ++|+++ .|+.|||+|+
T Consensus 393 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~-~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~ 469 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGN-PLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCT 469 (655)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCC-CCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEc
Confidence 999999999999988 4688999999999865433211 12233457899999999999999 678888 7999999999
Q ss_pred cC--ccccccCCCccccc--cccC--CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceE
Q 012015 396 GP--TIMKGYVGEPEVTS--ATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (473)
Q Consensus 396 ~~--~~~~gy~~~~~~~~--~~~~--~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (473)
|+ +++.||+++++.++ ..+. .+|||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||.|.+|
T Consensus 470 gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea 549 (655)
T PRK03584 470 KPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDS 549 (655)
T ss_pred cCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceE
Confidence 96 78999999998654 2221 257899999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q 012015 470 AVIP 473 (473)
Q Consensus 470 ~vvg 473 (473)
+|+|
T Consensus 550 ~vvg 553 (655)
T PRK03584 550 LVIG 553 (655)
T ss_pred EEEe
Confidence 9986
No 54
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-61 Score=487.20 Aligned_cols=424 Identities=27% Similarity=0.405 Sum_probs=367.6
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++...++.+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 11 ~~l~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 11 QTIGDILRRSARRY----PDKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999988 999999998 7999999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCeEEEE-c----------CCChhhhhcccCCCc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILI-D----------SPEFDSMTMSWNSKH 182 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~-~----------~~~~~~~~~~~~~~~ 182 (473)
+|++++|+++..+.+++.++++.+++++++++......+.+. ....+.. . ...+........ .
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 161 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGS-V- 161 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCC-C-
Confidence 999999999999999999999999999999998876655421 1111110 0 011222211111 0
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCe
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~ 261 (473)
.........+++++++|||||||.||+|.++|+++..........+ ...+++++++.+|++|..++ ..++.++..|++
T Consensus 162 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 162 AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 1123345678899999999999999999999999998877666666 68889999999999999988 445667889999
Q ss_pred EEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecC
Q 012015 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (473)
Q Consensus 262 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG 341 (473)
+++.+..++..+++.++++++|++.++|.++..+.+.......+++++|.+++||++++.++.+.+++.+++.++++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 99998889999999999999999999999999999877666677899999999999999999999999988899999999
Q ss_pred CcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeee
Q 012015 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (473)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (473)
+||++.++............+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.| .++||+
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~ 398 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFH 398 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCee
Confidence 999988766533322334457999999999999999 678999999999999999999999999999998887 689999
Q ss_pred cCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 422 TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|||+|++++||.++++||.||+||++|++|+|.+||+.|.++++|.+|+|+|
T Consensus 399 TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~ 450 (523)
T PRK08316 399 SGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIG 450 (523)
T ss_pred ccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEec
Confidence 9999999999999999999999999999999999999999999999999875
No 55
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=8.9e-61 Score=494.26 Aligned_cols=430 Identities=18% Similarity=0.241 Sum_probs=342.4
Q ss_pred CCCCCHHHHhcccc-cCCCCCCCCCcEEEECCCC------ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc
Q 012015 35 DAPISAVDYVSSLR-ATLPWRDDDTVALINSVTG------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (473)
Q Consensus 35 ~~~~~l~~~~~~~~-~~~~~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~ 107 (473)
+..+|+.+.+.++. .++ |+++|+++...+ +++||+||.++++++|+.|++ +|+++||+|+++++|+++
T Consensus 171 g~~ln~~~~~l~~~~~~~----pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~e 245 (728)
T PLN03052 171 GAVLNVAECCLTPKPSKT----DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNVH 245 (728)
T ss_pred CCEeEHHHHHHHHHhccC----CCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHH
Confidence 56678877666543 456 999999875322 489999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHH---------HHhc-CCCeEEEEc----------
Q 012015 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------KLAK-LKHRTILID---------- 167 (473)
Q Consensus 108 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~---------- 167 (473)
+++++|||+++|++++|++|.++.+++.+++++++++++|+++.... .+.+ ....++++.
T Consensus 246 ~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~ 325 (728)
T PLN03052 246 AVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKL 325 (728)
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccccc
Confidence 99999999999999999999999999999999999999999875421 1111 111222222
Q ss_pred ---CCChhhhhcccCC---CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 012015 168 ---SPEFDSMTMSWNS---KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 168 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 241 (473)
...|+++...... ...........+++++|+|||||||.||||+++|++++.........+ ...++|++++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l~~~d~~~~~~ 404 (728)
T PLN03052 326 REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DIRKGDIVCWPT 404 (728)
T ss_pred ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CCCCCcEEEECC
Confidence 1123333221110 001111123458899999999999999999999999877655444444 678899999999
Q ss_pred ChhhHHhHHHHHHHhhhcCeEEEecC-CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012015 242 PYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (473)
Q Consensus 242 pl~~~~g~~~~l~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~ 320 (473)
|+.|+.+.+.++.+|..|+++++.+. .++..+++.++++++|++.++|++++.|.+.......++++||.++++|++++
T Consensus 405 ~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~ 484 (728)
T PLN03052 405 NLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASS 484 (728)
T ss_pred CcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCC
Confidence 99999998878899999999999874 45678999999999999999999999998875555677899999999999999
Q ss_pred HHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCC--ccEEEEecCc
Q 012015 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPT 398 (473)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~ 398 (473)
++...++.+.++..++.+.||+||+++....... ......+++|+|.+|++++|+| ++|++++.|+ .|||+++++.
T Consensus 485 ~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~ 562 (728)
T PLN03052 485 VDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSL-LQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLM 562 (728)
T ss_pred HHHHHHHHHhcCCCCeEeeccChhhCcccccCCC-CCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCC
Confidence 9998888887644679999999999865433211 1223457899999999999999 7899999885 6999998753
Q ss_pred --cccccCCCccccccccC------CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHh-cCCCcceE
Q 012015 399 --IMKGYVGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLL-SHREVADA 469 (473)
Q Consensus 399 --~~~gy~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~ 469 (473)
...+|+++. .+...|. ...||+|||++++|+||+++++||.||+||++|++|++.|||++|. .||.|.||
T Consensus 563 ~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~ea 641 (728)
T PLN03052 563 FGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLET 641 (728)
T ss_pred CCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceE
Confidence 334666653 2222232 1238999999999999999999999999999999999999999995 89999999
Q ss_pred EEcC
Q 012015 470 AVIP 473 (473)
Q Consensus 470 ~vvg 473 (473)
+|||
T Consensus 642 aVvg 645 (728)
T PLN03052 642 AAIG 645 (728)
T ss_pred EEEe
Confidence 9986
No 56
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.8e-61 Score=536.89 Aligned_cols=417 Identities=20% Similarity=0.279 Sum_probs=361.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++.+ ||++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++++.+++++++||++
T Consensus 458 ~~l~~~~~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~ 530 (1296)
T PRK10252 458 TTLSALVAQQAAKT----PDAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVE 530 (1296)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 68999999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC-CeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|++++|++|+++.+++.++++.+++++++++......+.... ......+ ....... ........++++++
T Consensus 531 ~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~a~ 602 (1296)
T PRK10252 531 AGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYN-----APLAPQG---AAPLQLSQPHHTAY 602 (1296)
T ss_pred hCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecc-----ccccccc---CCCCCCCCCCCeEE
Confidence 9999999999999999999999999999999987666554321 1111111 1100000 11112235688999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec---CCCHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~---~~~~~~~ 273 (473)
++|||||||.||||.++|+++.+.+.+....+ +..+.+++++..|++|..++..++.++..|+++++.+ ..++..+
T Consensus 603 i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~ 681 (1296)
T PRK10252 603 IIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAM 681 (1296)
T ss_pred EEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHH
Confidence 99999999999999999999999888877777 7888999999999999999999999999999999976 3689999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCC--CCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccccc
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFR 351 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 351 (473)
.+.++++++|++.++|+++..+++...... ..++++|.+++|||++++++.+.|.+.+ +++++|.||+||++.+++.
T Consensus 682 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~ 760 (1296)
T PRK10252 682 QQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSW 760 (1296)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeee
Confidence 999999999999999999999887643222 3468999999999999999999999887 7899999999999876654
Q ss_pred ccCCCC-----CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCC------Cee
Q 012015 352 TVGPDE-----CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------GWM 420 (473)
Q Consensus 352 ~~~~~~-----~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~~~ 420 (473)
...... .....++|+|+++++++|+| +.+++++.|..|||+|+|+.+++||+++++.|.+.|..+ +||
T Consensus 761 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y 839 (1296)
T PRK10252 761 YPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMY 839 (1296)
T ss_pred eecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEE
Confidence 322111 22345899999999999999 789999999999999999999999999999999988654 399
Q ss_pred ecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEc
Q 012015 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 421 ~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
+|||+|++++||+++++||.|++||++|++|++.|||.+|.++|+|.+|+|+
T Consensus 840 ~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~ 891 (1296)
T PRK10252 840 RTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTH 891 (1296)
T ss_pred ecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEE
Confidence 9999999999999999999999999999999999999999999999999765
No 57
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-60 Score=487.06 Aligned_cols=429 Identities=28% Similarity=0.396 Sum_probs=361.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.|.+.++++ |+++|+++...++.+||+||.++++++|++|.+ .|+++|++|+++++|+++++++++||++
T Consensus 18 ~~l~~~l~~~~~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 18 QTIGDAFDATVARF----PDREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred CcHHHHHHHHHHHC----CCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999987557899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-----HHHhcC------------------CC-eEEEEcCC----
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------------------KH-RTILIDSP---- 169 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------------------~~-~~~~~~~~---- 169 (473)
+|++++++++.++.+++.++++.++++++|+++... ..+.+. .. ..+..+..
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPG 172 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCcc
Confidence 999999999999999999999999999999876432 111100 00 11111111
Q ss_pred --ChhhhhcccCCC----ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 012015 170 --EFDSMTMSWNSK----HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (473)
Q Consensus 170 --~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl 243 (473)
.++......... .........+++.++++|||||||.||+|.++|+++..........+ +..+++++++.+|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 251 (558)
T PRK12583 173 FLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-GLTEHDRLCVPVPL 251 (558)
T ss_pred ccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-CCCCCCeEEEecCc
Confidence 121111111000 00011223467899999999999999999999999988887766666 67889999999999
Q ss_pred hhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCH
Q 012015 244 FHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (473)
Q Consensus 244 ~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~ 321 (473)
+|.++. ..++.++..|+++++.. .+++..+++.++++++|++.++|+++..++........+++++|.+++||+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 999998 66788888999888653 5789999999999999999999999988887766566678999999999999999
Q ss_pred HHHHHHHHhCCCCeEEeecCCcccccccccccCC-CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccc
Q 012015 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (473)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 400 (473)
++.+++.+.+++..+.+.||+||++.++...... .......++|+|.+++.++|+|++ +.+++.|+.|||+++|+.++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 9999999998777899999999999876553221 112345789999999999999955 89999999999999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.||+++++.+...|+.++||+|||+|++++||++++.||.||+||++|.+|+|.+||++|.++|+|.+|+|+|
T Consensus 411 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 483 (558)
T PRK12583 411 KGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFG 483 (558)
T ss_pred hhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999888878899999999999999999999999999999999999999999999999999999975
No 58
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2e-61 Score=538.26 Aligned_cols=426 Identities=17% Similarity=0.223 Sum_probs=352.7
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC-------CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS-------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
.++.++|.++++.+ ||++|+++. ..++++||+||.++++++|++|.+ .|+++|++|+|+++|++++++
T Consensus 236 ~~l~~~~~~~a~~~----pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~ 310 (1389)
T TIGR03443 236 GAIHDIFADNAEKH----PDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVV 310 (1389)
T ss_pred CcHHHHHHHHHHhC----CCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHH
Confidence 47999999999999 999999863 135799999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch---HHHHhc-----C----CCeEEEEcCC-Ch------
Q 012015 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---VHKLAK-----L----KHRTILIDSP-EF------ 171 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~-----~----~~~~~~~~~~-~~------ 171 (473)
+++||+++|++++|++|.++.+++.++++.+++++++++... ...+.. . ....+.+... ..
T Consensus 311 ~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1389)
T TIGR03443 311 AVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLE 390 (1389)
T ss_pred HHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccc
Confidence 999999999999999999999999999999999999986542 111110 0 0111111110 00
Q ss_pred ---hhhhcccCC-CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHH
Q 012015 172 ---DSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (473)
Q Consensus 172 ---~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 247 (473)
.+....... ..........++++++++|||||||.||||+++|+++...+.+....+ +..++++++..+|++|..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSENDKFTMLSGIAHDP 469 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEecCceecc
Confidence 000000000 000111223568899999999999999999999999999887777666 678899999999999999
Q ss_pred hHHHHHHHhhhcCeEEEecC---CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHH
Q 012015 248 GLFFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTI 324 (473)
Q Consensus 248 g~~~~l~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 324 (473)
++..++.++..|+++++.+. .++..+++.|+++++|+++++|++++.|.... ...++++|.+++||++++++..
T Consensus 470 ~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 470 IQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred hHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHH
Confidence 88899999999999999764 36889999999999999999999999987543 2347899999999999999999
Q ss_pred HHHHHhCCCCeEEeecCCcccccccccccCCCC---------CCCCCCccccCCCcEEEEEcCC-CCCCCCCCCccEEEE
Q 012015 325 MAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPE-TGDSLPPGKEGELSI 394 (473)
Q Consensus 325 ~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~p~~~~~~~i~d~~-~~~~~~~g~~Gel~v 394 (473)
+++.+.+++++++|.||+||++.+++....... .....++|+|+++++++|+|.+ .+++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 999998889999999999999876654321111 1123578999999999999953 357899999999999
Q ss_pred ecCccccccCCCccccccccCC----------------------------CCeeecCceEEEccCCcEEEEeccCCeEEE
Q 012015 395 RGPTIMKGYVGEPEVTSATLLP----------------------------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKY 446 (473)
Q Consensus 395 ~~~~~~~gy~~~~~~~~~~~~~----------------------------~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~ 446 (473)
+|+++++||+++|+.|.+.|.. ++||+|||+|++++||+|+|+||.||+||+
T Consensus 627 ~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki 706 (1389)
T TIGR03443 627 RAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI 706 (1389)
T ss_pred cccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe
Confidence 9999999999999999988742 579999999999999999999999999999
Q ss_pred cCeeeChHHHHHHHhcCCCcceEEEc
Q 012015 447 KGYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 447 ~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
+|++|+|.|||.+|.+||.|.+|+|+
T Consensus 707 ~G~rI~p~eIE~~l~~~p~V~~a~v~ 732 (1389)
T TIGR03443 707 RGFRIELGEIDTHLSQHPLVRENVTL 732 (1389)
T ss_pred CcEEecHHHHHHHHHhCcchheeEEE
Confidence 99999999999999999999999886
No 59
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=9.4e-61 Score=485.68 Aligned_cols=424 Identities=27% Similarity=0.437 Sum_probs=359.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.++++.+ ||++|+++. +++++||+||.++++++|++|++ .|+++||+|+++++|+++++++++||++
T Consensus 23 ~~l~~~~~~~~~~~----pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 23 ASLADYWQQTARAM----PDKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57999999999999 999999876 35899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch-----HHHHh----cC-CC-eEEEEcCC-------ChhhhhcccC
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP-------EFDSMTMSWN 179 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~~-------~~~~~~~~~~ 179 (473)
+|++++|+++.++.+++.++++.+++++++++... ...+. .. .. .++.++.. .+..+.....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE 176 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC
Confidence 99999999999999999999999999999997532 11111 11 11 23333321 1112211111
Q ss_pred CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhh
Q 012015 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (473)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~ 258 (473)
. .........+++++++|||||||.||+|.++|+++........... ...+++++++.+|++|.+++ ..++.++..
T Consensus 177 ~--~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 177 P--LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred c--ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 0 1112234568899999999999999999999999988777666555 67889999999999999998 567888999
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
|+++++.+.+++..+++.|+++++++++.+|+.+..++........+++++|.+++||+++++++.+.+.+. ++++++
T Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 254 GARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 999999999999999999999999999988887777777655556678899999999999999999988775 899999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 418 (473)
.||+||++.+.+............++|+|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...+..++
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 410 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEG 410 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCC
Confidence 999999987765432221122345789999999999999 7889999999999999999999999999999988888889
Q ss_pred eeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 419 ~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+|||+++++++|+++++||.+|+|+.+|.+|+|.+||++|.++|+|.+++|+|
T Consensus 411 ~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 411 WYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred CcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999985
No 60
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-60 Score=478.43 Aligned_cols=409 Identities=26% Similarity=0.414 Sum_probs=344.0
Q ss_pred cccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCC
Q 012015 47 LRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 47 ~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
+++.+ ||++|+.+...++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||+++|++++|++
T Consensus 4 ~a~~~----p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 4 HARLQ----PQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLN 78 (488)
T ss_pred hhhhC----CCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeC
Confidence 34556 999999875448899999999999999999998 8999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCC
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGR 206 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 206 (473)
+.++.+++.+++++++++++++++...... ...+ .++.+.................+++++++|||||||.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~ 149 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDAVAAGR----TDVE-----DLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQ 149 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcchhhccc----cccc-----chhhhhhhccccccccCCCCCCCCceEEEeCCCCCCC
Confidence 999999999999999999999987543211 0011 1111111111000111122345789999999999999
Q ss_pred cchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHH--cccc
Q 012015 207 VKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEE--FRVT 283 (473)
Q Consensus 207 PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~--~~~t 283 (473)
||+|.++|+++........... .....+++++.+|++|.+++ ..++.++..|+++++.+.+++..++..+.+ +++|
T Consensus 150 PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t 228 (488)
T PRK09088 150 PKGVMLSERNLQQTAHNFGVLG-RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGIT 228 (488)
T ss_pred CcEEEEehHHHHHHHHHHHHhh-CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCc
Confidence 9999999999987776655544 56788999999999999998 456778888999998888899999988864 7899
Q ss_pred eEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCC-CCCCCCC
Q 012015 284 HAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWG 362 (473)
Q Consensus 284 ~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~ 362 (473)
.++.+|+++..+.+........++++|.+++||++++.+..+.+.+. ++++++.||+||++.+....... ......+
T Consensus 229 ~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~ 306 (488)
T PRK09088 229 HYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAG 306 (488)
T ss_pred EEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCC
Confidence 99999999999987655445567899999999999999988888865 78999999999998754322111 1123457
Q ss_pred CccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCC
Q 012015 363 STGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKD 442 (473)
Q Consensus 363 ~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d 442 (473)
++|.|.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.++.+|||+|||+|+++++|++++.||.||
T Consensus 307 ~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d 385 (488)
T PRK09088 307 AAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKD 385 (488)
T ss_pred ccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccc
Confidence 899999999999999 6789999999999999999999999999999998888899999999999999999999999999
Q ss_pred eEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 443 LIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 443 ~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+||.+|.+|+|.+||++|.++|.|.+++|+|
T Consensus 386 ~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~ 416 (488)
T PRK09088 386 MFISGGENVYPAEIEAVLADHPGIRECAVVG 416 (488)
T ss_pred eEEeCCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 9999999999999999999999999999985
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-60 Score=483.28 Aligned_cols=427 Identities=28% Similarity=0.425 Sum_probs=358.3
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
.+++|+.+++...++++ |+++|+++. ++++||+||.++++++|..|++ .|+++|++|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA 76 (528)
T PRK07470 4 RRVMNLAHFLRQAARRF----PDRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFA 76 (528)
T ss_pred ccCCCHHHHHHHHHHHC----CCceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34589999999999999 999999997 7899999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC------CCeEEEEcC----CChhhhhcccCCCccc
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDS----PEFDSMTMSWNSKHEL 184 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~~~~ 184 (473)
|+++|++++|+++.++.+++.++++.++++.++++.+........ ....+.++. ..+.++....... ..
T Consensus 77 ~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (528)
T PRK07470 77 AFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGA-RV 155 (528)
T ss_pred HHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCC-CC
Confidence 999999999999999999999999999999999998765443311 112233322 2233332221111 11
Q ss_pred cccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc-cCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEE
Q 012015 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (473)
Q Consensus 185 ~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v 263 (473)
.......+++++++|||||||.||+|.++|+++...+..... ...+..+.++++..+|++|.+++..++ .+..|++.+
T Consensus 156 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~ 234 (528)
T PRK07470 156 ANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATV 234 (528)
T ss_pred CcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEE
Confidence 222345688999999999999999999999999765543222 222456788999999999999886544 577788877
Q ss_pred Eec--CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecC
Q 012015 264 VMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (473)
Q Consensus 264 ~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG 341 (473)
+.+ .+++..+++.|+++++|++.++|++++.+.+........++++|.+++||++++++..+++.+.+ +..+++.||
T Consensus 235 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG 313 (528)
T PRK07470 235 LLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFG 313 (528)
T ss_pred EecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCC
Confidence 764 57899999999999999999999999999887766666789999999999999999999998888 688999999
Q ss_pred CcccccccccccCC------CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccC
Q 012015 342 LTESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (473)
Q Consensus 342 ~tE~~~~~~~~~~~------~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 415 (473)
+||+++.+...... ......+++|.|+++++++++| +++++++.|+.|||+++|+.++.||+++++.+.+.|
T Consensus 314 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~- 391 (528)
T PRK07470 314 LGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF- 391 (528)
T ss_pred CcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-
Confidence 99998765532110 0122346899999999999999 688999999999999999999999999999998877
Q ss_pred CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 416 ~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.++||+|||+|++++||++++.||.||+||++|++|+|.+||.+|.+++.|.+|+|+|
T Consensus 392 ~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 449 (528)
T PRK07470 392 RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLG 449 (528)
T ss_pred cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEe
Confidence 5899999999999999999999999999999999999999999999999999999985
No 62
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-61 Score=487.89 Aligned_cols=414 Identities=21% Similarity=0.285 Sum_probs=328.2
Q ss_pred HHHHhcccccCCCCCCCCCcEEEECCCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 40 AVDYVSSLRATLPWRDDDTVALINSVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 40 l~~~~~~~~~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+.+.+.+.++++ |+++|+++.+.+ +++||+||.++++++|+.|.+ + ++||+|+|+++|++++++++|||++
T Consensus 4 ~~~~l~~~~~~~----~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 4 LAAALSDAMTAS----GRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred HHHHHHHHhcCC----CCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 778888889988 999999987432 789999999999999999998 5 8999999999999999999999999
Q ss_pred hCCeEecCCCC-------CCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccC
Q 012015 118 LGVIISPANPV-------NTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVC 190 (473)
Q Consensus 118 ~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
+|+++++++.. ...+++.++++.+++++++++......+......+ .+. ++........ ........
T Consensus 77 ~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~ 150 (525)
T PRK05851 77 AGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSV-TVH--DLATAAHTNR---SASLTPPD 150 (525)
T ss_pred cCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhccc-ccc--cccccccccc---cccCCCCC
Confidence 99986543211 12345567789999999999877655443321111 111 1111000000 11111235
Q ss_pred CCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCC-CCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC--
Q 012015 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV-SPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (473)
Q Consensus 191 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~-~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-- 267 (473)
++++++++|||||||.||||+++|+++...+......+ ... .++++++.+|++|.+++..++.++..|+++++.+.
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~ 229 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTA 229 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHH
Confidence 68999999999999999999999999998887776666 566 89999999999999999888899999999999763
Q ss_pred C--CHHHHHHHHHHcccceEEecHHHHHHHhcCCC-CCCCCCCCceEEEecCCCCCHHHHHHHHHh---C--CCCeEEee
Q 012015 268 F--DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-TDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PKVVLVQA 339 (473)
Q Consensus 268 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~---~--~~~~~~~~ 339 (473)
+ ++..+++.+.++++|.+..+|.++..+.+... ....+++++|.+++||+++++++.++|.+. + +...+++.
T Consensus 230 ~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 309 (525)
T PRK05851 230 FSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPS 309 (525)
T ss_pred HHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccc
Confidence 4 67889999999999988665555555544322 234457899999999999999999999875 2 22459999
Q ss_pred cCCcccccccccccCCC-------------CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCC
Q 012015 340 YGLTESTAGVFRTVGPD-------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE 406 (473)
Q Consensus 340 yG~tE~~~~~~~~~~~~-------------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 406 (473)
||+||++.++....... .....+++|+|++|++++|+|++.+.+++.|+.|||+++|++++.||+++
T Consensus 310 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~ 389 (525)
T PRK05851 310 YGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQ 389 (525)
T ss_pred cchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccC
Confidence 99999986655422110 01233589999999999999965556789999999999999999999999
Q ss_pred ccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 407 PEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++.+ .++||+|||+|+++ +|+|+++||.||+||++|++|+|.|||++|.+||.|.+|+|++
T Consensus 390 ~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~ 450 (525)
T PRK05851 390 APID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVA 450 (525)
T ss_pred CccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEE
Confidence 8643 47899999999996 8999999999999999999999999999999999999999874
No 63
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-60 Score=485.43 Aligned_cols=426 Identities=31% Similarity=0.466 Sum_probs=352.3
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.+.+.++++ |+++|+++. ++++||.||.++++++|++|.++.|+++||+|+++++|+++++++++||++
T Consensus 24 ~~~~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 24 KSVVEVFERSCKKF----ADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred CcHHHHHHHHHHhC----CCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999888 999999887 789999999999999999998734999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEc-------------------------
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILID------------------------- 167 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~------------------------- 167 (473)
+|++++|+++.++.+++.+++++++++++++++...+.+... ... .+...
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVP 177 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhccccccccccccc
Confidence 999999999999999999999999999999976543332211 000 00000
Q ss_pred ------CCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC--------CCC
Q 012015 168 ------SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK--------RVS 233 (473)
Q Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~--------~~~ 233 (473)
...++....... ...........+++++++|||||||.||+|.++|+++...+......+.. ...
T Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK12492 178 AYHLPQAVPFKQALRQGR-GLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKE 256 (562)
T ss_pred ccCCcccccHHHHHhccC-CCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccC
Confidence 000111111000 00111123456789999999999999999999999998766554332210 122
Q ss_pred -CcEEEEecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCce
Q 012015 234 -PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (473)
Q Consensus 234 -~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 310 (473)
++++++.+|++|.+++ ..++..+..|++.++.. .+++..+++.++++++|++.++|+++..+.+.......+++++|
T Consensus 257 ~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 336 (562)
T PRK12492 257 GQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALK 336 (562)
T ss_pred CCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccccccee
Confidence 4577899999999998 55667778888777654 56899999999999999999999999999887665666788999
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCcc
Q 012015 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (473)
Q Consensus 311 ~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~G 390 (473)
.+++||+++++++.++|.+.+ ++++++.||+||++.++..... ......+++|+|+++++++|+| +++++++.|+.|
T Consensus 337 ~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~G 413 (562)
T PRK12492 337 LTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPY-GELARLGTVGIPVPGTALKVID-DDGNELPLGERG 413 (562)
T ss_pred EEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCC-cccccCCccceecCCCEEEEEC-CCCCCCCCCCce
Confidence 999999999999999999887 8999999999999877654322 2223457899999999999999 678999999999
Q ss_pred EEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEE
Q 012015 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (473)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (473)
||+++|+.++.||+++++.+.+.|..++||+|||+|+++++|++++.||.||+||++|++|+|.+||.+|.++|.|.+|+
T Consensus 414 el~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~ 493 (562)
T PRK12492 414 ELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCA 493 (562)
T ss_pred EEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999999998877899999999999999999999999999999999999999999999999999999
Q ss_pred EcC
Q 012015 471 VIP 473 (473)
Q Consensus 471 vvg 473 (473)
|+|
T Consensus 494 v~~ 496 (562)
T PRK12492 494 AIG 496 (562)
T ss_pred EEe
Confidence 975
No 64
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.3e-60 Score=479.94 Aligned_cols=425 Identities=27% Similarity=0.391 Sum_probs=355.9
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECC---CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
.++.+++.+.++++ |+++|+++.. +.+.+||.||.++++++|+.|.+ +|+++||+|+++++|+.+++++++|
T Consensus 7 ~~l~~~~~~~a~~~----p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 7 QHLRQMWDDLADVY----GHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred ccHHHHHHHHHHHC----CCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 58999999999999 9999998752 23789999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC------CC-eEEEEcC--------CChhhhhcccC
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KH-RTILIDS--------PEFDSMTMSWN 179 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~-~~~~~~~--------~~~~~~~~~~~ 179 (473)
|+++|++++++++..+.+++.++++++++++++++.+....+.+. .. .++..+. ..+++......
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQP 161 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCC
Confidence 999999999999999999999999999999999998766554422 11 1222221 11222211111
Q ss_pred CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhh
Q 012015 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (473)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~ 258 (473)
.. .........+++++++|||||||.||+|.++|++++.......... ....++++++.+|++|..+. ..++.++..
T Consensus 162 ~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 162 AT-LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred cc-ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 00 1112234568899999999999999999999999986543222222 46778999999999998766 667889999
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
|+++++.+.+++..+++.++++++|++.++|++++.+............+++.+.++ .+++++..+++.+.+ ++++++
T Consensus 240 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 317 (517)
T PRK08008 240 GATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLT 317 (517)
T ss_pred CcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEe
Confidence 999999999999999999999999999999999999887654443345678877775 478999999999988 899999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEec---CccccccCCCccccccccC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG---PTIMKGYVGEPEVTSATLL 415 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~---~~~~~gy~~~~~~~~~~~~ 415 (473)
.||+||++..+..... .....+.++|.|+++++++|+| +++++++.|+.|||+++| ++++.||+++++.+.+.|.
T Consensus 318 ~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~ 395 (517)
T PRK08008 318 SYGMTETIVGIIGDRP-GDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE 395 (517)
T ss_pred eccccccccccccCCc-cccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc
Confidence 9999999876554332 2334557899999999999999 789999999999999998 5899999999999999998
Q ss_pred CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 416 ~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.+|||+|||+|++|+||++++.||.||+||++|++|+|.+||+++.+++.|.+|+|+|
T Consensus 396 ~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g 453 (517)
T PRK08008 396 ADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVG 453 (517)
T ss_pred CCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEc
Confidence 8999999999999999999999999999999999999999999999999999999986
No 65
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-60 Score=484.42 Aligned_cols=428 Identities=25% Similarity=0.399 Sum_probs=356.7
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
..+.++.+++...++++ |+++|+++. ++.+||+||.++++++|.+|.+ .|+++||+|+++++|+++++++++|
T Consensus 20 ~~~~~i~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la 92 (557)
T PRK07059 20 SQYPSLADLLEESFRQY----ADRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGARVAIMMPNVLQYPVAIAA 92 (557)
T ss_pred CCCCCHHHHHHHHHHHc----CCCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHH
Confidence 34468999999999999 999999997 8899999999999999999999 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEcCC--------------------
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP-------------------- 169 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~-------------------- 169 (473)
|+++|++++|++|..+.+++.++++.++++++++++.....+.+. ... +++....
T Consensus 93 ~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (557)
T PRK07059 93 VLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKM 172 (557)
T ss_pred HHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccccccccc
Confidence 999999999999999999999999999999999987765443321 111 1111100
Q ss_pred ----------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC---C---CCC
Q 012015 170 ----------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP---K---RVS 233 (473)
Q Consensus 170 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~---~---~~~ 233 (473)
.+.+...... ..........++++++++|||||||.||+|.++|++++........... . ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
T PRK07059 173 VPAWSLPGHVRFNDALAEGA-RQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPD 251 (557)
T ss_pred ccccCCCCcccHHHHhhccC-CCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCC
Confidence 0111111100 0011123345688999999999999999999999999876543322210 1 113
Q ss_pred CcEEEEecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceE
Q 012015 234 PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLET 311 (473)
Q Consensus 234 ~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 311 (473)
...+++.+|++|.+++ ...+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.........+++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 4577888999999887 56677888888877765 458899999999999999999999999999876666667889999
Q ss_pred EEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccE
Q 012015 312 VACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (473)
Q Consensus 312 v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Ge 391 (473)
++.||+++++.+.++|.+.+ ++++++.||+||++.++..... ......+++|+|+++++++|+| +++++++.|+.||
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Ge 408 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPV-DATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGE 408 (557)
T ss_pred EEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCC-CCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceE
Confidence 99999999999999999988 7999999999999887654322 1223457999999999999999 7789999999999
Q ss_pred EEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEE
Q 012015 392 LSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAV 471 (473)
Q Consensus 392 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v 471 (473)
|+++|+.++.||+++++.+.+.|..+|||+|||++++++||+++++||.+|++|++|++|+|.+||.+|.++|+|.+++|
T Consensus 409 l~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v 488 (557)
T PRK07059 409 ICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAA 488 (557)
T ss_pred EEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEE
Confidence 99999999999999999999888889999999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q 012015 472 IP 473 (473)
Q Consensus 472 vg 473 (473)
+|
T Consensus 489 ~~ 490 (557)
T PRK07059 489 VG 490 (557)
T ss_pred Ee
Confidence 74
No 66
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-60 Score=485.24 Aligned_cols=423 Identities=27% Similarity=0.389 Sum_probs=341.6
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.|+.+++.+.++.+ |+++|+++. +.++||+||.++++++|+.|.+ +|+++||+|+|+++|++++++++|||++
T Consensus 14 ~~~~~~l~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~~ 86 (579)
T PLN03102 14 LTPITFLKRASECY----PNRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVPM 86 (579)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 67888888888888 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----------CCeEEEEcCCC-----------hhhhh
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----------KHRTILIDSPE-----------FDSMT 175 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----------~~~~~~~~~~~-----------~~~~~ 175 (473)
+|++++|+++.++.+++.++++.++++++|++++....+.+. ..+++.++... +.++.
T Consensus 87 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (579)
T PLN03102 87 AGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLI 166 (579)
T ss_pred cCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHH
Confidence 999999999999999999999999999999987766544321 12344443211 11111
Q ss_pred cccCCCccc---cccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHH
Q 012015 176 MSWNSKHEL---DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (473)
Q Consensus 176 ~~~~~~~~~---~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~ 252 (473)
......... .......+++++++|||||||.||+|+++|+++........... .....++.++.+|++|..++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~ 245 (579)
T PLN03102 167 QRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-EMGTCPVYLWTLPMFHCNGWTFT 245 (579)
T ss_pred hccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-CCCCCCeEEecCChhhhcchhHH
Confidence 111100000 01123467899999999999999999999999755443333333 34567788999999999998777
Q ss_pred HHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012015 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (473)
Q Consensus 253 l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 332 (473)
+.++..|+++++...+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++.+ +
T Consensus 246 ~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~- 323 (579)
T PLN03102 246 WGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L- 323 (579)
T ss_pred HHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-
Confidence 88899999999998889999999999999999999999999998875444444567888999999999999999876 4
Q ss_pred CCeEEeecCCcccccccccccCCC------C------CCCCCCccccCCCcEEEEEcCCCCCCCCC--CCccEEEEecCc
Q 012015 333 KVVLVQAYGLTESTAGVFRTVGPD------E------CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPT 398 (473)
Q Consensus 333 ~~~~~~~yG~tE~~~~~~~~~~~~------~------~~~~~~~G~p~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~ 398 (473)
+.++++.||+||+++.++...... . ....+..+.+++ .+.+.|.+.+++++. ++.|||+++|+.
T Consensus 324 g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~ 401 (579)
T PLN03102 324 GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSS 401 (579)
T ss_pred CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcc
Confidence 789999999999986543211100 0 011223334444 455666566777764 367999999999
Q ss_pred cccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 399 IMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++||+++++.+.+.| .+|||+|||+|++|+||++++.||.+|+||++|++|+|.+||.+|.+||.|.+|+|+|
T Consensus 402 ~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 475 (579)
T PLN03102 402 IMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVA 475 (579)
T ss_pred hhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEe
Confidence 9999999999999888 5899999999999999999999999999999999999999999999999999999985
No 67
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-60 Score=480.50 Aligned_cols=415 Identities=21% Similarity=0.256 Sum_probs=344.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCC-CCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
.|+.+++.+++ . |+++|+++. +..+||+||.++++++|..|.+ .|+ ++||+|+++++|+++++++++||+
T Consensus 3 ~~~~~~l~~~~--~----p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~ 73 (540)
T PRK13388 3 DTIAQLLRDRA--G----DDTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAA 73 (540)
T ss_pred hhHHHHHHhhc--c----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHH
Confidence 46888887654 5 899999997 7899999999999999999998 899 799999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC---CCeEEEEcCCChhhhhcccCCCccccccccCCCC
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (473)
++|++++|++|.++.+++.+++++++++++|++++....+.+. ..+.+.++...+.++...... ..+.....+++
T Consensus 74 ~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 151 (540)
T PRK13388 74 LGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGA--LTPHREVDAMD 151 (540)
T ss_pred hCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccC--cCCCCCCCCCC
Confidence 9999999999999999999999999999999998776655443 234444444344433321111 11112345689
Q ss_pred EEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHH-HHHHhhhcCeEEEecCCCHHH
Q 012015 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF-CFRAAALMETAVVMQRFDLKM 272 (473)
Q Consensus 194 ~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~l~~l~~G~~~v~~~~~~~~~ 272 (473)
+++++|||||||.||+|.++|+++..........+ +...+++++..+|++|.+++.. ++.++..|+++++.+.+++..
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 230 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASG 230 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHH
Confidence 99999999999999999999999988777766666 6788999999999999998854 456889999999888889999
Q ss_pred HHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccc
Q 012015 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (473)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 352 (473)
+++.++++++|++..+|..+..++...........+++.+ + |++++++..+++.+.+ +.++++.||+||++.++...
T Consensus 231 ~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~ 307 (540)
T PRK13388 231 FLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE 307 (540)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecC
Confidence 9999999999999999999998887654322223456643 3 6667888889999888 78999999999998766532
Q ss_pred cCCCCCCCCCCccccCCCcEEE-----------EEcCCCCCCC-CCCCccEEEEe-cCccccccCCCccccccccCCCCe
Q 012015 353 VGPDECRRWGSTGRLSAGLEAK-----------IVDPETGDSL-PPGKEGELSIR-GPTIMKGYVGEPEVTSATLLPDGW 419 (473)
Q Consensus 353 ~~~~~~~~~~~~G~p~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~~~~ 419 (473)
.....+++|+|++++++. ++| ++|+.+ +++..|||+++ |+.++.||+++++.+.+.| .+||
T Consensus 308 ----~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~ 381 (540)
T PRK13388 308 ----PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGM 381 (540)
T ss_pred ----CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCc
Confidence 122457899999997653 334 445544 34678999998 9999999999999998888 5799
Q ss_pred eecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 420 ~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+|||+|++++||+++++||.||+||++|++|+|.+||.+|.++|.|.+|+|+|
T Consensus 382 ~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g 435 (540)
T PRK13388 382 YWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYA 435 (540)
T ss_pred eeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEE
Confidence 999999999999999999999999999999999999999999999999999975
No 68
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.4e-60 Score=488.05 Aligned_cols=425 Identities=19% Similarity=0.194 Sum_probs=336.6
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~ 111 (473)
+..+|+.+.+.++ . ++++|+++... .+++||+||.++++++|+.|++ +|+++||+|+++++|+++++++
T Consensus 84 ~~~~n~~~~~~~~---~----~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 84 GARLNYAENLLRA---A----GTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred CCeeeHHHHHhcc---C----CCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 5668888888864 3 67888877422 2689999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch---------HHHHh----cCC--CeEEEEcC--------
Q 012015 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKLA----KLK--HRTILIDS-------- 168 (473)
Q Consensus 112 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~----~~~--~~~~~~~~-------- 168 (473)
+|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+. ... ..+++++.
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEA 235 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999997643 12221 111 12333321
Q ss_pred ------CChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHH-HHhhccCCCCCCCcEEEEec
Q 012015 169 ------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV-ASSFASSPKRVSPAVMLFTM 241 (473)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~-~~~~~~~~~~~~~~~~l~~~ 241 (473)
..++++..... ...........+++++|+|||||||.||||+++|++++... ......+ +..++|++++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~ 313 (652)
T TIGR01217 236 PKIDGALDLEDFTAAAQ-AAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYYT 313 (652)
T ss_pred ccccCcccHHHHHhccc-CCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEeC
Confidence 11233222111 10111223455889999999999999999999999875433 3333334 678899999999
Q ss_pred ChhhHHhHHHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEec
Q 012015 242 PYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACG 315 (473)
Q Consensus 242 pl~~~~g~~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~ 315 (473)
|+.|... ..++.++..|+++++.+. .++..+++.++++++|++..+|.+++.+..... ....++++||.+++|
T Consensus 314 ~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~g 392 (652)
T TIGR01217 314 TTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAST 392 (652)
T ss_pred Ccchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEee
Confidence 9999754 335589999999999852 378899999999999999888888877765421 234578999999999
Q ss_pred CCCCCHHHHHHHHHhCC-CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEE
Q 012015 316 AAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (473)
Q Consensus 316 G~~l~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v 394 (473)
|+++++++.+++.+.++ +..+.+.||+||+++..... ........+++|.|.+|++++|+| ++|+++ +|+.|||++
T Consensus 393 Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v 469 (652)
T TIGR01217 393 GSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA-NPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVC 469 (652)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC-CCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEE
Confidence 99999999999998873 45678999999975443321 112223457899999999999999 678888 599999999
Q ss_pred ecC--ccccccCCCccccc--cccC--CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcce
Q 012015 395 RGP--TIMKGYVGEPEVTS--ATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD 468 (473)
Q Consensus 395 ~~~--~~~~gy~~~~~~~~--~~~~--~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~ 468 (473)
+|+ +++.||+++++.++ +.+. .+|||+|||+|++|+||+|+++||.||+||++|++|+|.|||++|.+||.|.|
T Consensus 470 ~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~e 549 (652)
T TIGR01217 470 TNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRE 549 (652)
T ss_pred ecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcce
Confidence 996 68899999998664 2222 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q 012015 469 AAVIP 473 (473)
Q Consensus 469 ~~vvg 473 (473)
|+|||
T Consensus 550 aavvg 554 (652)
T TIGR01217 550 SLCIG 554 (652)
T ss_pred EEEEe
Confidence 99986
No 69
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4e-61 Score=577.04 Aligned_cols=421 Identities=23% Similarity=0.305 Sum_probs=367.9
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++++ ||++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||++
T Consensus 511 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~ 583 (5163)
T PRK12316 511 RGVHRLFEEQVERT----PEAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILK 583 (5163)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 58999999999999 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|++++|++|.++.+++.+++++++++++|++......+... ...++.++... ....... .........++++++
T Consensus 584 aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~a~ 659 (5163)
T PRK12316 584 AGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA--AWLEGYS--EENPGTELNPENLAY 659 (5163)
T ss_pred cCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc--hhhccCC--CCCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998765544322 23344443211 1111111 012223346789999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec---CCCHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~---~~~~~~~ 273 (473)
++|||||||.||||+++|+++.+.+.+....+ +...+++++..+|++|..++..++.++..|+++++.+ .+++..+
T Consensus 660 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~ 738 (5163)
T PRK12316 660 VIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKL 738 (5163)
T ss_pred EEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHH
Confidence 99999999999999999999999998888777 6888999999999999999999999999999999985 3789999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccccccc
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 353 (473)
++.++++++|++.++|++++.|.+... ...++++|.+++|||++++++.++|.+.+++++++|.||+||++..++...
T Consensus 739 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 816 (5163)
T PRK12316 739 VELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWT 816 (5163)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEe
Confidence 999999999999999999999987543 235789999999999999999999998888899999999999986554433
Q ss_pred CCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC------CCeeecCceEE
Q 012015 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------DGWMRTGDLCY 427 (473)
Q Consensus 354 ~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------~~~~~TgD~~~ 427 (473)
.........++|+|++|++++|+| +++++++.|+.|||+|+|+++++||+++|+.|.+.|.. ++||+|||+|+
T Consensus 817 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~ 895 (5163)
T PRK12316 817 CVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLAR 895 (5163)
T ss_pred cccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEE
Confidence 222333456899999999999999 67999999999999999999999999999999988853 35999999999
Q ss_pred EccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 428 IDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 428 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++||+|+++||+||+||++|++|+|.|||++|.+||.|.+|+|++
T Consensus 896 ~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~ 941 (5163)
T PRK12316 896 YRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLA 941 (5163)
T ss_pred ECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEE
Confidence 9999999999999999999999999999999999999999999985
No 70
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-61 Score=569.98 Aligned_cols=422 Identities=21% Similarity=0.318 Sum_probs=366.6
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|++++++++++++++|||++
T Consensus 1574 ~~~~~~~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlk 1646 (3956)
T PRK12467 1574 RLVHQLIEDQAAAT----PEAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILK 1646 (3956)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhc
Confidence 57999999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|++++|++|.++.+++.++++++++++++++......+... ....+.++... ....... . ........++++++
T Consensus 1647 aG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~ay 1722 (3956)
T PRK12467 1647 AGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED--DWLEGYS-D-SNPAVNLAPQNLAY 1722 (3956)
T ss_pred cCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc--chhccCC-C-CCCCCCCCCcCcEE
Confidence 999999999999999999999999999999988766554322 22344443221 1111111 0 11223345789999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC---CCHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMM 273 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~---~~~~~~ 273 (473)
++|||||||.||||+++|+++.+.+......+ +....++++...|++|..+++.++.++..|+++++.+. .++..+
T Consensus 1723 iiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l 1801 (3956)
T PRK12467 1723 VIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQL 1801 (3956)
T ss_pred EEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHH
Confidence 99999999999999999999999888877776 68889999999999999999999999999999999864 578999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccccccc
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 353 (473)
++.|+++++|++.++|+++..|.+... ....++++|.+++|||++++++.+.|.+.+++..++|.||+||++..++...
T Consensus 1802 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~ 1880 (3956)
T PRK12467 1802 IQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWT 1880 (3956)
T ss_pred HHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEe
Confidence 999999999999999999999987522 2345789999999999999999999999888889999999999987665433
Q ss_pred CC---CCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-------CCeeecC
Q 012015 354 GP---DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTG 423 (473)
Q Consensus 354 ~~---~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~Tg 423 (473)
.. .......++|+|+++++++|+| +.+++++.|..|||+|+|+++++||+++|+.|.++|.. .+||+||
T Consensus 1881 ~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTG 1959 (3956)
T PRK12467 1881 CRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTG 1959 (3956)
T ss_pred ccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceecc
Confidence 21 1122346899999999999999 78999999999999999999999999999999998853 3599999
Q ss_pred ceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 424 DLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 424 D~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+|++++||+|+++||.||+||++|++|+|.|||++|.++|+|.+|+|++
T Consensus 1960 Dl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~ 2009 (3956)
T PRK12467 1960 DLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIA 2009 (3956)
T ss_pred ceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999999974
No 71
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-60 Score=476.69 Aligned_cols=416 Identities=25% Similarity=0.329 Sum_probs=349.4
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.+.+.+. ++++|+++. ++++||.||.++++++|++|+++.|++++++|+++++|+++++++++||++
T Consensus 5 ~~~~~~l~~~a~------~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 5 PTVAELLLPLAE------DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred ccHHHHHHHhcc------cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 588999887764 678999987 789999999999999999999833889999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC--CCeEEEEcCCChhhhhcccCCCccccccccCCCCEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (473)
+|++++|+++..+.+++.++++++++++++++++....+... ...++.++...+.+.+...... ........+++++
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 155 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDA-EPPFRVADPDDLF 155 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCC-CCCcccCCccceE
Confidence 999999999999999999999999999999998877655443 2334444433344433221111 1122234668899
Q ss_pred EEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHH
Q 012015 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMML 274 (473)
Q Consensus 196 ~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~ 274 (473)
+++|||||||.||+|.++|+++..........+ +....+++++.+|++|.+++ ..++.++..|+++++.+.+++..++
T Consensus 156 ~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 234 (529)
T PRK07867 156 MLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFL 234 (529)
T ss_pred EEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHH
Confidence 999999999999999999999988877766666 67789999999999999998 4466789999999998889999999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccC
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 354 (473)
+.++++++|++.++|+.+..++..........+++|. ++||+.+++.. +++.+.+ ++++++.||+||++.++...
T Consensus 235 ~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~-- 309 (529)
T PRK07867 235 PDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRT-- 309 (529)
T ss_pred HHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccC--
Confidence 9999999999999999999888765433333457774 56888887764 6777777 78999999999998655431
Q ss_pred CCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCC------------ccEEEE-ecCccccccCCCccccccccCCCCeee
Q 012015 355 PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK------------EGELSI-RGPTIMKGYVGEPEVTSATLLPDGWMR 421 (473)
Q Consensus 355 ~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (473)
.....+++|.|+++ ++++|++++.+++.|+ .|||++ +|+.++.||+++++.+.+.| .+|||+
T Consensus 310 --~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~ 384 (529)
T PRK07867 310 --PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYW 384 (529)
T ss_pred --CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEe
Confidence 11234689999999 6778877888898888 899999 99999999999999998877 589999
Q ss_pred cCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 422 TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|||+|+++++|++++.||.||+|+++|++|+|.+||++|.++|.|.+|+|+|
T Consensus 385 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 436 (529)
T PRK07867 385 SGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYA 436 (529)
T ss_pred eccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999985
No 72
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.8e-60 Score=479.47 Aligned_cols=420 Identities=27% Similarity=0.382 Sum_probs=359.3
Q ss_pred HHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhC
Q 012015 40 AVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (473)
Q Consensus 40 l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 119 (473)
+.+.+...++++ |+++|+.+. ++++||+||.+++.++|++|++ .|+++|++|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAARL----PDATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 677888888888 999999997 7899999999999999999998 899999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC------CeEEEEcCC-----------ChhhhhcccCCCc
Q 012015 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDSP-----------EFDSMTMSWNSKH 182 (473)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~~~ 182 (473)
++++|+++.++.+++..+++++++++++++......+.... ..++.++.. .++.+.....
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccc---
Confidence 99999999999999999999999999999877655443211 123333321 1222221111
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeE
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~ 262 (473)
.........++.++++|||||||.||+|.+||+++...+......+ ...+++++++.+|++|.+++..++.++..|+++
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~ 230 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATV 230 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEEECchhhHhHHHHHHHHHHcCCEE
Confidence 1112223457899999999999999999999999998887766665 678889999999999999998889999999999
Q ss_pred EEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCC
Q 012015 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (473)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~ 342 (473)
++.+.+++..+++.++++++|++.++|+++..|.+... ....++++|.+++||+++++++.+++++.+++..+++.||+
T Consensus 231 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~ 309 (515)
T TIGR03098 231 VLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGL 309 (515)
T ss_pred EEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecc
Confidence 99988999999999999999999999999999887532 22357899999999999999999999999988899999999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC------
Q 012015 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------ 416 (473)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------ 416 (473)
||++...... ........+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.|.+
T Consensus 310 tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~ 387 (515)
T TIGR03098 310 TEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPG 387 (515)
T ss_pred ccccceEecc-cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccc
Confidence 9987654432 122234567999999999999999 77899999999999999999999999999888766543
Q ss_pred -----CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 417 -----DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 417 -----~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++||+|||+|+++++|++++.||.+|+||++|.+|+|.+||++|.++|.|.+|+|+|
T Consensus 388 ~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 449 (515)
T TIGR03098 388 ELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFG 449 (515)
T ss_pred cccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEe
Confidence 248999999999999999999999999999999999999999999999999999985
No 73
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-60 Score=479.81 Aligned_cols=424 Identities=34% Similarity=0.500 Sum_probs=369.9
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
+.++.++|.+.++.+ |+++|+.+. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+.+++++++||+
T Consensus 5 ~~~l~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 5 PLTIGRILRHGARKH----PDKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred cCCHHHHHHHHHHHC----CCceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 379999999999999 999999998 7789999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----C-C-eEEEEcCC----------ChhhhhcccCC
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K-H-RTILIDSP----------EFDSMTMSWNS 180 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~-~-~~~~~~~~----------~~~~~~~~~~~ 180 (473)
++|++++|+++.++.+++..+++.+++++++++.+..+.+... . . .++.++.. .+.++......
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASD 157 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCc
Confidence 9999999999999999999999999999999998876655432 1 1 23333221 23333222111
Q ss_pred CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcC
Q 012015 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALME 260 (473)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~ 260 (473)
.........+++++++|||||||.||+|.++|+++..........+ +..+++++++.+|++|.+++...+.++..|+
T Consensus 158 --~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (521)
T PRK06187 158 --TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVYLVIVPMFHVHAWGLPYLALMAGA 234 (521)
T ss_pred --cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEEEEeCCchHHhhHHHHHHHHHhCC
Confidence 1122344567899999999999999999999999998887766665 7889999999999999999877677999999
Q ss_pred eEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
++++.+.+++..+++.++++++|.++++|+++..+.+.......+++++|.+++||+++++++.+.+.+.+ ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999998876667789999999999999999999999998 89999999
Q ss_pred CCcccccccccccCCCC----CCCCCCccccCCCcEEEEEcCCCCCCCCC--CCccEEEEecCccccccCCCcccccccc
Q 012015 341 GLTESTAGVFRTVGPDE----CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPTIMKGYVGEPEVTSATL 414 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~----~~~~~~~G~p~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 414 (473)
|+||++.++........ .....++|+|+++++++|+| +++.+++. |+.|||+++|+.++.||+++++.+.+.|
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 99999876665332221 12557999999999999999 56788888 9999999999999999999999888887
Q ss_pred CCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 415 LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 415 ~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.++||+|||+++++++|++++.||.+|++|++|.++++.+||++|.++++|.+|+|++
T Consensus 393 -~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 450 (521)
T PRK06187 393 -DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIG 450 (521)
T ss_pred -hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEe
Confidence 4779999999999999999999999999999999999999999999999999999874
No 74
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-60 Score=478.07 Aligned_cols=414 Identities=22% Similarity=0.287 Sum_probs=348.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
+.|+.+.+.+.++.+ ||++|+++. ++.+||+||.++++++|++|++ .|+++||+|+++++|++++++++|||+
T Consensus 34 ~~~~~~~~~~~a~~~----p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~ 106 (516)
T PRK13383 34 GTNPYTLLAVTAARW----PGRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVG 106 (516)
T ss_pred CCcHHHHHHHHHHHC----CCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 378999999889888 999999987 7799999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
++|++++|+++.++.+++.++++.++++++++++...+.+.......+.++...... .. ........++.++
T Consensus 107 ~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~p~~~~~~~~ 178 (516)
T PRK13383 107 LLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAGA--EE------SGGRPAVAAPGRI 178 (516)
T ss_pred HhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhhh--hc------CCCCCCCCCCCcE
Confidence 999999999999999999999999999999999887766655433333333211100 00 0001112355678
Q ss_pred EEccCCCCCCcchhhhcHHHHHHH--HHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAA--VASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMML 274 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~--~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~ 274 (473)
++|||||||.||+|.++|...... ........ ....+++++..+|++|.+++...+.++..|+++++...+++..++
T Consensus 179 il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~ 257 (516)
T PRK13383 179 VLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAAL 257 (516)
T ss_pred EEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHH
Confidence 999999999999999999843211 11122223 567889999999999999998788899999999998889999999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccc
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 352 (473)
+.++++++|.+.++|+++..+.+.... ....++++|.+++||+++++++.++|.+.+ +..+++.||+||++..+...
T Consensus 258 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~ 336 (516)
T PRK13383 258 AQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALAT 336 (516)
T ss_pred HHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceecc
Confidence 999999999999999999999876432 233578999999999999999999999998 78899999999998665442
Q ss_pred cCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCC
Q 012015 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (473)
Q Consensus 353 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 432 (473)
. .......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||++++.. .+ .+|||+|||+|++|++|
T Consensus 337 ~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~G 410 (516)
T PRK13383 337 P-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNAG 410 (516)
T ss_pred c-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCCc
Confidence 2 12223457899999999999999 6789999999999999999999999987542 22 57999999999999999
Q ss_pred cEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 433 FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 433 ~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++.||.||+||++|.+|+|.+||++|.++|.|.+++|++
T Consensus 411 ~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~ 451 (516)
T PRK13383 411 RLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIG 451 (516)
T ss_pred cEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99999999999999999999999999999999999999875
No 75
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-60 Score=489.80 Aligned_cols=419 Identities=24% Similarity=0.359 Sum_probs=336.8
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
+|+.+++.++++++ |+++|+++.. ..+++||+||.++++++|++|.+ . +++||+|+++++|++++++
T Consensus 34 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 34 TTLISLIERNIANV----GDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHH
Confidence 78999999888888 9999998631 12589999999999999999988 5 8999999999999999999
Q ss_pred HHHHHHHhCCeEecC-CCCCC--HHHHHHHHhhcCCeEEEEccchHHHHhcC----C----CeEEEEcCCChhhhhcccC
Q 012015 111 LYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----HRTILIDSPEFDSMTMSWN 179 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~ 179 (473)
++|||+++|++++|+ ++.++ .+++.+++++++++++|++++....+.+. . ..++.++.. .....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~ 182 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAI-----PDSAG 182 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccc-----ccccc
Confidence 999999999999999 57776 78999999999999999988766544321 1 123333211 00000
Q ss_pred CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC-CCCCcEEEEecChhhHHhHHHHHHHhhh
Q 012015 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (473)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~g~~~~l~~l~~ 258 (473)
. ........++++++++|||||||.||||.++|+++..........+ . ..++++.++.+|++|.+++...+.++..
T Consensus 183 -~-~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~ 259 (612)
T PRK12476 183 -E-SFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-DLLDRNTHGVSWLPLYHDMGLSMIGFPAVY 259 (612)
T ss_pred -c-cccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-ccCCCCceEEEeCCcccccchHHHHHHHhc
Confidence 0 1111234568999999999999999999999999987766555444 4 5778999999999999999766666667
Q ss_pred cCeEEEecC--C--CHHHHHHHHH--HcccceEEecHHHHHHHhcCCC----CCCCCCCCceEEEecCCCCCHHHHHHHH
Q 012015 259 METAVVMQR--F--DLKMMLKAVE--EFRVTHAAVTPPIVVAMSKGGS----TDGYDLSSLETVACGAAPLGKDTIMAFA 328 (473)
Q Consensus 259 G~~~v~~~~--~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~----~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 328 (473)
|++.++..+ + ++..+++.++ +++++.++.+|+++..++.... ....+++++| +++||+++++++.++|.
T Consensus 260 gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~ 338 (612)
T PRK12476 260 GGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFN 338 (612)
T ss_pred CCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHH
Confidence 777766643 3 8899999995 4899999999998887765421 2344688999 99999999999999999
Q ss_pred HhCC-----CCeEEeecCCcccccccccccCCCC-------------------------CCCCCCccccCCCcEEEEEcC
Q 012015 329 SKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CRRWGSTGRLSAGLEAKIVDP 378 (473)
Q Consensus 329 ~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~~~G~p~~~~~~~i~d~ 378 (473)
+.|+ ...+++.||+||++..+........ ....+++|+|+++++++|+|+
T Consensus 339 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~ 418 (612)
T PRK12476 339 KAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDP 418 (612)
T ss_pred HHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeC
Confidence 9872 3458999999998765433211100 001247899999999999996
Q ss_pred CCCCCCCCCCccEEEEecCccccccCCCccccccccCC------------------CCeeecCceEEEccCCcEEEEecc
Q 012015 379 ETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------------------DGWMRTGDLCYIDEDGFLFIVDRL 440 (473)
Q Consensus 379 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------------------~~~~~TgD~~~~~~~g~l~~~GR~ 440 (473)
+++++++.|+.|||+++|+.++.||+++++.|.+.|.. ++||+|||+|++ .||+|+|+||+
T Consensus 419 ~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~ 497 (612)
T PRK12476 419 DTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRI 497 (612)
T ss_pred CCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEecc
Confidence 55999999999999999999999999999999888741 359999999998 59999999999
Q ss_pred CCeEEEcCeeeChHHHHHHHhc-CCCcce--EEEc
Q 012015 441 KDLIKYKGYQVAPAELEHLLLS-HREVAD--AAVI 472 (473)
Q Consensus 441 ~d~i~~~G~~v~~~~IE~~l~~-~~~v~~--~~vv 472 (473)
||+||++|++|+|.|||++|.+ ||.|.+ ++|+
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~ 532 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAF 532 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhcccccCCcEEEE
Confidence 9999999999999999999985 799999 5544
No 76
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-60 Score=481.84 Aligned_cols=426 Identities=24% Similarity=0.311 Sum_probs=355.2
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..++.++|...++.+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+.+++++++||+
T Consensus 9 ~~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~ 81 (540)
T PRK06164 9 ADTLASLLDAHARAR----PDAVALIDE--DRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACA 81 (540)
T ss_pred CCCHHHHHHHHHHhC----CCCeEEecC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 368999999999999 999999976 7899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH-----HHHhcC------CC-eEEEEcCCC--hh--------hh
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------KH-RTILIDSPE--FD--------SM 174 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------~~-~~~~~~~~~--~~--------~~ 174 (473)
++|++++|+++..+.+++.++++.+++++++++.+.. +.+... .. .++.++... .. ..
T Consensus 82 ~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (540)
T PRK06164 82 RLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQL 161 (540)
T ss_pred HhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccc
Confidence 9999999999999999999999999999999976642 112111 11 222232100 00 00
Q ss_pred hcccCCC-cc-ccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHH
Q 012015 175 TMSWNSK-HE-LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (473)
Q Consensus 175 ~~~~~~~-~~-~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~ 252 (473)
....... .. ........+++++++|||||||.||+|.++|+++..........+ +...++++++.+|++|.+++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~ 240 (540)
T PRK06164 162 FALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-GYDPGAVLLAALPFCGVFGFSTL 240 (540)
T ss_pred ccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCCEEEEcCCchhHHHHHHH
Confidence 0000000 00 001123457899999999999999999999999998887777666 67789999999999999999888
Q ss_pred HHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecC-CCCCHHHHHHHHHhC
Q 012015 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA-APLGKDTIMAFASKF 331 (473)
Q Consensus 253 l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G-~~l~~~~~~~~~~~~ 331 (473)
+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+. .....+++++|.+..+| .+...++.+++.+.
T Consensus 241 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 318 (540)
T PRK06164 241 LGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDT-AGERADFPSARLFGFASFAPALGELAALARAR- 318 (540)
T ss_pred HHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh-hcccCCCcceeeeeeccCCcchHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999887 23445688999887766 55556776766665
Q ss_pred CCCeEEeecCCcccccccccccCCC-CCCCCCCccccC-CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccc
Q 012015 332 PKVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEV 409 (473)
Q Consensus 332 ~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~ 409 (473)
++++++.||+||++.++....... ......+.|.|. +++.++|+|++++++++.|+.|||+|+|+.++.||+++++.
T Consensus 319 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~ 397 (540)
T PRK06164 319 -GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDA 397 (540)
T ss_pred -CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchh
Confidence 789999999999987665432211 122234668875 89999999988999999999999999999999999999999
Q ss_pred cccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 410 TSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 410 ~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.+.|..++||+|||+|+++++|++++.||.+|+||++|++|+|.+||++|.++|+|.+++|+|
T Consensus 398 t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~ 461 (540)
T PRK06164 398 TARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVG 461 (540)
T ss_pred hhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEe
Confidence 9999988999999999999999999999999999999999999999999999999999999875
No 77
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.9e-60 Score=495.96 Aligned_cols=419 Identities=21% Similarity=0.292 Sum_probs=340.2
Q ss_pred CCCHHHHhcccccCCCCCCCC-CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDD-TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
..|+.+++.+.++++ |+ ++|+.+. .++++||+||.++++++|++|.+ . +++||+|+++++|++++++++|||
T Consensus 203 ~~t~~~~l~~~~~~~----p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~ 275 (718)
T PRK08043 203 RETLYEALLSAQYRY----GAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGA 275 (718)
T ss_pred CCCHHHHHHHHHHHh----CCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHH
Confidence 368999999999999 87 5787653 24789999999999999999988 5 599999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHh--cC-----CCeEEEEcCC----Chhhh-h-cccCCCc
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA--KL-----KHRTILIDSP----EFDSM-T-MSWNSKH 182 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~-----~~~~~~~~~~----~~~~~-~-~~~~~~~ 182 (473)
+++|++++|+++.++.++++++++++++++++++.+..+... .. ....+.++.. .+... . .......
T Consensus 276 ~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (718)
T PRK08043 276 SLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMP 355 (718)
T ss_pred HHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCC
Confidence 999999999999999999999999999999999876554311 00 1122222211 00000 0 0000000
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCe
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~ 261 (473)
........++++++++|||||||.||||+++|+++..........+ +..++|++++.+|++|.+++ ..++.++..|++
T Consensus 356 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~ 434 (718)
T PRK08043 356 RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAE 434 (718)
T ss_pred ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCE
Confidence 0111233568999999999999999999999999998887766655 67889999999999999998 567899999999
Q ss_pred EEEecC-CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 262 ~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
+++.+. +++..+++.+.++++|.+.++|+++..+.+.. ...+++++|.+++||+++++++.+.+++.+ ++++++.|
T Consensus 435 vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~Y 511 (718)
T PRK08043 435 VFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGY 511 (718)
T ss_pred EEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeeccc
Confidence 998864 57788899999999999999999998876642 234678999999999999999999999988 88999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCC--Cccc-------cc
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVG--EPEV-------TS 411 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~--~~~~-------~~ 411 (473)
|+||++.+++... ......+++|+|+|+++++++|. ++. ++.|||+++|+.++.||++ +++. +.
T Consensus 512 G~TE~~~~~~~~~--~~~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~ 584 (718)
T PRK08043 512 GVTECAPVVSINV--PMAAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENA 584 (718)
T ss_pred CcccccceEEecC--CcccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCccccccCCCCcccccccccccc
Confidence 9999987665432 22335689999999999999983 332 4569999999999999998 4442 22
Q ss_pred cccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 412 ATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 412 ~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.+..+|||+|||+|++|+||++++.||.||+||++|++|+|.|||+++.+++.+.+++|++
T Consensus 585 ~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~ 646 (718)
T PRK08043 585 RGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAI 646 (718)
T ss_pred cccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEE
Confidence 23345799999999999999999999999999999999999999999999998888887764
No 78
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-59 Score=478.49 Aligned_cols=445 Identities=28% Similarity=0.396 Sum_probs=364.0
Q ss_pred CceecCCCCCCCCCCCCCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEE
Q 012015 19 TKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTA 98 (473)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V 98 (473)
.++|....|...+.. ....++.+++.+.++.+ |+++|+.+. ++.+||+||.++++++|+.|.+ .|+++|++|
T Consensus 15 ~~~~~~~~~~~~~~~-~~~~~l~~~l~~~a~~~----p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V 86 (567)
T PRK06178 15 QAAWPAGIPREPEYP-HGERPLTEYLRAWARER----PQRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDRV 86 (567)
T ss_pred HhhCCcCCCCCCCCC-cCcccHHHHHHHHHHHC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEE
Confidence 456665555443322 33478999999999988 999999987 7899999999999999999998 899999999
Q ss_pred EEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCe-EEEEcCCC---
Q 012015 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE--- 170 (473)
Q Consensus 99 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~~--- 170 (473)
+++++|+++++++++||+++|++++|++|..+.+++.+++++++++++++++...+.+.+. ... ++.....+
T Consensus 87 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~ 166 (567)
T PRK06178 87 AVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLP 166 (567)
T ss_pred EEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999998876655432 111 11111000
Q ss_pred --------------------hhhhhcccCC-CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC
Q 012015 171 --------------------FDSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP 229 (473)
Q Consensus 171 --------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~ 229 (473)
+.++...... ...........+++++++|||||||.||+|.+||+++............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~ 246 (567)
T PRK06178 167 AEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAV 246 (567)
T ss_pred cccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhc
Confidence 0000000000 0011122345688999999999999999999999999877655443322
Q ss_pred CCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCC
Q 012015 230 KRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS 308 (473)
Q Consensus 230 ~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 308 (473)
...+.+++++.+|++|.+|+ ..++.++..|+++++.+++++..++..++++++|.+.++|..+..+.........++++
T Consensus 247 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 247 VGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 56788999999999999998 56888999999999999999999999999999999999999999988765555566778
Q ss_pred ceEEEe--cCCCCCHHHHHHHHHhCCCCeEE-eecCCcccccccccccCCCC-----CCCCCCccccCCCcEEEEEcCCC
Q 012015 309 LETVAC--GAAPLGKDTIMAFASKFPKVVLV-QAYGLTESTAGVFRTVGPDE-----CRRWGSTGRLSAGLEAKIVDPET 380 (473)
Q Consensus 309 lr~v~~--~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~-----~~~~~~~G~p~~~~~~~i~d~~~ 380 (473)
++.+.. .++.+++++.+.|++.+ +..++ +.||+||++..+........ ....+++|+|++|++++++|+++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 887654 45999999999999988 44444 57999998766443221110 12346799999999999999888
Q ss_pred CCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHH
Q 012015 381 GDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLL 460 (473)
Q Consensus 381 ~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l 460 (473)
+++++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||++++++||+++++||.+|+||++|.+|+|.+||+++
T Consensus 406 ~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l 484 (567)
T PRK06178 406 GELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALL 484 (567)
T ss_pred CCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHH
Confidence 9999999999999999999999999999998877 578999999999999999999999999999999999999999999
Q ss_pred hcCCCcceEEEcC
Q 012015 461 LSHREVADAAVIP 473 (473)
Q Consensus 461 ~~~~~v~~~~vvg 473 (473)
.++++|.+++|+|
T Consensus 485 ~~~~~v~~~~v~~ 497 (567)
T PRK06178 485 GQHPAVLGSAVVG 497 (567)
T ss_pred HhCCCeeEEEEEc
Confidence 9999999999875
No 79
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-60 Score=572.83 Aligned_cols=421 Identities=19% Similarity=0.293 Sum_probs=364.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++.+ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+|+++++++++++++||++
T Consensus 2003 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~ 2075 (5163)
T PRK12316 2003 PGVHQRIAEQAARA----PEAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLK 2075 (5163)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 8899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|+++||++|.++.+++.+++++++++++++++.....+... ....+.++.. ...... . . ........++++++
T Consensus 2076 aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~-~~~~~~~~~~~~a~ 2150 (5163)
T PRK12316 2076 AGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD--AEWADY-P-D-TAPAVQLAGENLAY 2150 (5163)
T ss_pred hceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch--hhhhcc-C-c-cCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766544321 2222222211 111110 0 0 11223456789999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC--CCHHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~--~~~~~~~ 274 (473)
++|||||||.||||+++|+++.+.+......+ ...++++++..+|++|..++..++.+|..|+++++.+. +++..++
T Consensus 2151 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~ 2229 (5163)
T PRK12316 2151 VIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-ELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLY 2229 (5163)
T ss_pred EEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-CCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHH
Confidence 99999999999999999999999988877777 68889999999999999999999999999999977653 6899999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccC
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 354 (473)
+.|+++++|++.++|++++.+.+...... ...++|.+++|||++++++.++|.+.+++.+++|.||+||++..++....
T Consensus 2230 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 2308 (5163)
T PRK12316 2230 DEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKC 2308 (5163)
T ss_pred HHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeec
Confidence 99999999999999999999987643322 24589999999999999999999998888999999999999877654332
Q ss_pred CCCCC---CCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-------CCeeecCc
Q 012015 355 PDECR---RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGD 424 (473)
Q Consensus 355 ~~~~~---~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TgD 424 (473)
..... ...++|+|+++++++|+| +++++++.|..|||+|+|+++++||+++|+.|.+.|.. ++||+|||
T Consensus 2309 ~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGD 2387 (5163)
T PRK12316 2309 RPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGD 2387 (5163)
T ss_pred ccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEeccc
Confidence 21111 225899999999999999 77899999999999999999999999999999999853 35999999
Q ss_pred eEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 425 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|++++||+|+++||+||+||++|++|+|.|||.+|.++|+|.+|+|++
T Consensus 2388 l~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~ 2436 (5163)
T PRK12316 2388 LARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVA 2436 (5163)
T ss_pred EEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEE
Confidence 9999999999999999999999999999999999999999999999874
No 80
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=9.7e-60 Score=476.40 Aligned_cols=422 Identities=25% Similarity=0.357 Sum_probs=355.3
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..++.+++.+.++ ||++|+++. ++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||+
T Consensus 24 ~~~~~~~~~~~a~------p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la~~ 94 (536)
T PRK10946 24 DLPLTDILTRHAA------SDAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFALL 94 (536)
T ss_pred CccHHHHHHHhhC------CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHHHH
Confidence 3689999977775 789999998 8899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch--------HHHHhcC--CCeEEEEcCC----ChhhhhcccCCCc
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKLAKL--KHRTILIDSP----EFDSMTMSWNSKH 182 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~ 182 (473)
++|++++++.+.....++..+++.+++++++++... ...+.+. ..+.+.+... .+.........
T Consensus 95 ~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 172 (536)
T PRK10946 95 KLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAE-- 172 (536)
T ss_pred HcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCccc--
Confidence 999988877777778889999999999999987542 2222221 1222222211 12222222111
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHH--HHHHHhhhcC
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAALME 260 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~l~~l~~G~ 260 (473)
........++++++++|||||||.||+|.++|+++...+......+ ....++++++.+|++|.+++. ..+.++..|+
T Consensus 173 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~ 251 (536)
T PRK10946 173 DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFTPQTRYLCALPAAHNYPMSSPGALGVFLAGG 251 (536)
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCceEEEecCccccccchhhhHHHHhhcCc
Confidence 1112234568899999999999999999999999999888776666 678889999999999988873 5788899999
Q ss_pred eEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCC--CCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG--STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
++++.+.+++..+++.++++++|++.++|.++..+++.. ......++++|.+++||+++++++.+++.+.+ ++++++
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~ 330 (536)
T PRK10946 252 TVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQ 330 (536)
T ss_pred EEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEE
Confidence 999988889999999999999999999999999998763 22334578999999999999999999999988 899999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccC-CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCC
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD 417 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 417 (473)
.||+||++..... ..........++|+|+ +++.++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.|..+
T Consensus 331 ~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d 408 (536)
T PRK10946 331 VFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDAN 408 (536)
T ss_pred eecccccceeeec-CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccC
Confidence 9999996543322 1222223457899999 799999999 788999999999999999999999999999999999889
Q ss_pred CeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 418 ~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+||+|||+|++|++|++++.||.+|++|++|++|+|.+||.+|.++|+|.+++|++
T Consensus 409 ~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 464 (536)
T PRK10946 409 GFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVS 464 (536)
T ss_pred CceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEc
Confidence 99999999999999999999999999999999999999999999999999999874
No 81
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.1e-60 Score=474.10 Aligned_cols=419 Identities=22% Similarity=0.316 Sum_probs=355.8
Q ss_pred CHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHh
Q 012015 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (473)
Q Consensus 39 ~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 118 (473)
++.+.+.+.++.+ |+++|+.+. ++.+||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++
T Consensus 1 ~~~~~l~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 73 (502)
T TIGR01734 1 KLIEAIQAFAETY----PQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKS 73 (502)
T ss_pred CHHHHHHHHHHHC----CCceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHh
Confidence 5778888888888 999999887 8899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEE
Q 012015 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (473)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 198 (473)
|++++|+++.++.+++.++++..+++.++++.+....... ...+.++. ......... . .........++.++++
T Consensus 74 G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~-~-~~~~~~~~~~~~~~il 147 (502)
T TIGR01734 74 GHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--TQIITLSA--LEQAETSGG-P-VSFDHAVKGDDNYYII 147 (502)
T ss_pred CCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--CceEEchH--hhhhhhhcC-C-ccccccCCCCCeEEEE
Confidence 9999999999999999999999999999998765433322 12222221 111111111 0 1111223567899999
Q ss_pred ccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC---CCHHHHHH
Q 012015 199 YSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMMLK 275 (473)
Q Consensus 199 ~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~---~~~~~~~~ 275 (473)
|||||||.||+|.++|+++..........+ ....+++++...|++|..++...+.++..|+++++.++ .++..+++
T Consensus 148 ~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 226 (502)
T TIGR01734 148 YTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFE 226 (502)
T ss_pred ECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHH
Confidence 999999999999999999998888777666 67788999999999999999888999999999999875 58899999
Q ss_pred HHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCC
Q 012015 276 AVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP 355 (473)
Q Consensus 276 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 355 (473)
.+.+++++.+.++|+++..+..........+++++.++++|+++++++.+++.+.++++.+++.||+||++..+......
T Consensus 227 ~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 306 (502)
T TIGR01734 227 ELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKIT 306 (502)
T ss_pred HHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEcc
Confidence 99999999999999999887765444455688999999999999999999999999899999999999987654432211
Q ss_pred C---CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccC---CCCeeecCceEEEc
Q 012015 356 D---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL---PDGWMRTGDLCYID 429 (473)
Q Consensus 356 ~---~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~~~ 429 (473)
. ......++|.|.++++++|+| ++++++++|+.|||+++|+.++.||+++++.+.+.|. .++||+|||+|++|
T Consensus 307 ~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~ 385 (502)
T TIGR01734 307 QEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTIT 385 (502)
T ss_pred ccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEE
Confidence 1 112335799999999999999 6789999999999999999999999999999887663 23599999999998
Q ss_pred cCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 430 EDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 430 ~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++ ++++.||.+|+|+++|++|+|.+||.++.++|.|++|+|++
T Consensus 386 ~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~ 428 (502)
T TIGR01734 386 DG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVP 428 (502)
T ss_pred CC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEE
Confidence 76 99999999999999999999999999999999999999974
No 82
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.8e-59 Score=476.27 Aligned_cols=444 Identities=26% Similarity=0.387 Sum_probs=361.3
Q ss_pred ceecCCCCCC-CCCCC-CCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCE
Q 012015 20 KTFHSLRPPI-DLPPE-DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDT 97 (473)
Q Consensus 20 ~~~~~~~~~~-~~~~~-~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~ 97 (473)
|-|++++++- ....+ ....++.++|...++++ |+++|+++. ++++||+||.++++++|+.|..+.|+++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~ 78 (560)
T PRK08751 5 RPWLQSYPAGVAAEIDLEQFRTVAEVFATSVAKF----ADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDR 78 (560)
T ss_pred cchhhhcCCCCCCccCCcCCCcHHHHHHHHHHhC----CCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 4455555542 22111 23358999999999988 999999987 8899999999999999999973389999999
Q ss_pred EEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc----CCCe-EEEEcCC---
Q 012015 98 AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHR-TILIDSP--- 169 (473)
Q Consensus 98 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~-~~~~~~~--- 169 (473)
|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++++.....+.. .... ++..+..
T Consensus 79 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (560)
T PRK08751 79 VALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDML 158 (560)
T ss_pred EEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhc
Confidence 9999999999999999999999999999999999999999999999999998876554432 1111 1111100
Q ss_pred ----------------------------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHH
Q 012015 170 ----------------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV 221 (473)
Q Consensus 170 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~ 221 (473)
.+.+...... ...........+++++++|||||||.||+|.++|+++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~ 237 (560)
T PRK08751 159 GFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGR-KHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANM 237 (560)
T ss_pred ccccchhhhhhhhhhhccccccCCCccccHHHHHhccC-CCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHH
Confidence 0011110000 00111223456789999999999999999999999998777
Q ss_pred HHhhccCC---CCCC-CcEEEEecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHH
Q 012015 222 ASSFASSP---KRVS-PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAM 295 (473)
Q Consensus 222 ~~~~~~~~---~~~~-~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 295 (473)
......+. .... .+++++.+|++|.+++ ...+.++..|++.++.. .+++..+++.++++++|++.++|.++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 317 (560)
T PRK08751 238 QQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGL 317 (560)
T ss_pred HHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHH
Confidence 65444331 1223 4677888999999988 44567777888776654 57899999999999999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEE
Q 012015 296 SKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKI 375 (473)
Q Consensus 296 ~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 375 (473)
.+.......+++++|.+++||+++++++.+.|++.+ ++.+++.||+||++..+..... ......+++|.|++++++++
T Consensus 318 ~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i 395 (560)
T PRK08751 318 LNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDACI 395 (560)
T ss_pred HcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEEE
Confidence 987655566788999999999999999999999987 7899999999999876554221 22234578999999999999
Q ss_pred EcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHH
Q 012015 376 VDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAE 455 (473)
Q Consensus 376 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 455 (473)
+| +++++++.|+.|||+++|+.++.||+++++.+.+.|..+|||+|||+|+++++|+++++||.+|+||++|.+|+|.+
T Consensus 396 ~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~e 474 (560)
T PRK08751 396 KD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNE 474 (560)
T ss_pred EC-CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHH
Confidence 99 78899999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEcC
Q 012015 456 LEHLLLSHREVADAAVIP 473 (473)
Q Consensus 456 IE~~l~~~~~v~~~~vvg 473 (473)
||.+|.++++|.+|+|+|
T Consensus 475 iE~~l~~~~~v~~~~v~~ 492 (560)
T PRK08751 475 IEDVIAMMPGVLEVAAVG 492 (560)
T ss_pred HHHHHHhCcCeeeeEEEe
Confidence 999999999999999875
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.7e-60 Score=519.93 Aligned_cols=428 Identities=26% Similarity=0.354 Sum_probs=361.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..++.+.+.+.++++ |+++|+++. .++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+
T Consensus 614 ~~~l~~~~~~~a~~~----p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~ 686 (1146)
T PRK08633 614 LPPLAEAWIDTAKRN----WSRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALL 686 (1146)
T ss_pred CCCHHHHHHHHHHhc----CCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHH
Confidence 368899999889888 999999874 36799999999999999999987 47999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc------C--CCeEEEEcCCC--------hhhhhcccCC
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L--KHRTILIDSPE--------FDSMTMSWNS 180 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------~--~~~~~~~~~~~--------~~~~~~~~~~ 180 (473)
++|++++|+++..+.+++.++++++++++++++++..+.+.+ . ..+++..+... +.........
T Consensus 687 ~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 687 LAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLL 766 (1146)
T ss_pred HcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccC
Confidence 999999999999999999999999999999999877766542 1 11223222110 1110000000
Q ss_pred Cc----cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHH
Q 012015 181 KH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRA 255 (473)
Q Consensus 181 ~~----~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~ 255 (473)
.. ........++++++++|||||||.||+|.++|+++..........+ ...++|++++.+|++|.+++ ...+.+
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~ 845 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-NLRNDDVILSSLPFFHSFGLTVTLWLP 845 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-CCCCCCEEEEcCcHHHHHhHHHHHHHH
Confidence 00 0001334678999999999999999999999999998887776666 67789999999999999998 447889
Q ss_pred hhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCC
Q 012015 256 AALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV 334 (473)
Q Consensus 256 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 334 (473)
+..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.......+++++|.+++||+++++++.+++++.+ +.
T Consensus 846 l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~ 924 (1146)
T PRK08633 846 LLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GI 924 (1146)
T ss_pred HHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CC
Confidence 99999998876 47899999999999999999999999999887655666789999999999999999999999998 78
Q ss_pred eEEeecCCcccccccccccCCC--------CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCC
Q 012015 335 VLVQAYGLTESTAGVFRTVGPD--------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE 406 (473)
Q Consensus 335 ~~~~~yG~tE~~~~~~~~~~~~--------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 406 (473)
++++.||+||++.+++...... .....+++|+|+|+++++|+|+++++++++|+.|||+++|+.++.||+++
T Consensus 925 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 925 RILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred CeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 9999999999987765432211 11245789999999999999988899999999999999999999999999
Q ss_pred ccccccccCC---CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCC--CcceEEEcC
Q 012015 407 PEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHR--EVADAAVIP 473 (473)
Q Consensus 407 ~~~~~~~~~~---~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~--~v~~~~vvg 473 (473)
++.+.+.+.+ ++||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+|| .+.+|+|++
T Consensus 1005 ~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~ 1076 (1146)
T PRK08633 1005 PEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTA 1076 (1146)
T ss_pred ccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEe
Confidence 9999887743 289999999999999999999999999999999999999999999998 566788764
No 84
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-59 Score=475.35 Aligned_cols=424 Identities=32% Similarity=0.512 Sum_probs=353.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.+.++.+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+.+++++++||++
T Consensus 24 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (563)
T PRK06710 24 QPLHKYVEQMASRY----PEKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLL 96 (563)
T ss_pred ccHHHHHHHHHHHC----CCceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 57999999999988 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCeEEEEc-CCC----------------------
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILID-SPE---------------------- 170 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~-~~~---------------------- 170 (473)
+|++++|++|..+.+++.++++.++++++++++.....+... ....+.+. ...
T Consensus 97 ~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 97 AGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccc
Confidence 999999999999999999999999999999987654433211 01111110 000
Q ss_pred ----------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhcc-CCCCCCCcEEEE
Q 012015 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS-SPKRVSPAVMLF 239 (473)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~-~~~~~~~~~~l~ 239 (473)
+..+... . ...........++.++++|||||||.||+|.++|+++.......... ......++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 177 KVSESETIHLWNSVEKE-V-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred cccccchhhhhhhhhhc-c-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 0000000 0 00001111234689999999999999999999999997654333222 212334568899
Q ss_pred ecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCC
Q 012015 240 TMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP 318 (473)
Q Consensus 240 ~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~ 318 (473)
.+|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+........++++|.+++||++
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~ 334 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAP 334 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCc
Confidence 9999999988 456678889999999988999999999999999999999999999988765555567899999999999
Q ss_pred CCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCc
Q 012015 319 LGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPT 398 (473)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 398 (473)
+++++.+++.+.+ +..+++.||+||++.+...... ......+++|+|.+++.++++|++++++++.|+.|||+++|+.
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 335 LPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFL-WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred CCHHHHHHHHHhh-CCCEecccccccCccccccCcc-cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 9999999999988 7899999999999876543221 1223456899999999999999888999999999999999999
Q ss_pred cccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 399 IMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++.||+++++.+...| .+|||+|||+++++++|+++++||.||+||++|.+|+|.+||++|.++|.|.+|+|+|
T Consensus 413 ~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~ 486 (563)
T PRK06710 413 IMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 486 (563)
T ss_pred cchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEc
Confidence 9999999999998877 5899999999999999999999999999999999999999999999999999999985
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-59 Score=474.27 Aligned_cols=424 Identities=28% Similarity=0.412 Sum_probs=360.8
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.|+.+++.+.++++ |+++|+++. ++.+||.||.++++++|..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 12 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~ 84 (524)
T PRK06188 12 ATYGHLLVSALKRY----PDRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQL 84 (524)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc-hHHHHhc----C-C-CeEEEEcCC-ChhhhhcccCCC-ccccccc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSS-VVHKLAK----L-K-HRTILIDSP-EFDSMTMSWNSK-HELDRAK 188 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~----~-~-~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 188 (473)
+|++++|++|..+.+++.++++.++++.+++++. ......+ . . ..++.++.. ...++....... .......
T Consensus 85 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (524)
T PRK06188 85 AGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPAPLVAA 164 (524)
T ss_pred hCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCccccccc
Confidence 9999999999999999999999999999999876 3332221 1 1 122322221 111111110000 0111122
Q ss_pred cCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCC
Q 012015 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (473)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~ 268 (473)
..++++++++|||||||.||+|.++|+++..........+ ....++++++.+|++|.+++. ++.++..|+++++.+.+
T Consensus 165 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~ 242 (524)
T PRK06188 165 ALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKF 242 (524)
T ss_pred CCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcCCC
Confidence 3345699999999999999999999999998888777666 678899999999999988864 57889999999999999
Q ss_pred CHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccc
Q 012015 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (473)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 348 (473)
++..+++.++++++|++.++|+++..+++........++++|.+++||++++++..+++.+.+ +..+++.||+||++.+
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 321 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMV 321 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCc
Confidence 999999999999999999999999999988766667789999999999999999999998888 6779999999999765
Q ss_pred cccccCCC----CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCc
Q 012015 349 VFRTVGPD----ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (473)
Q Consensus 349 ~~~~~~~~----~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD 424 (473)
+....... ......++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 399 (524)
T PRK06188 322 ITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGD 399 (524)
T ss_pred eeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecc
Confidence 54422111 123456899999999999999 669999999999999999999999999999998887 689999999
Q ss_pred eEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 425 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++++||++++.||.+++++++|++|+|.+||++|.++++|.+++|++
T Consensus 400 l~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 448 (524)
T PRK06188 400 VAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIG 448 (524)
T ss_pred eEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999875
No 86
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.2e-61 Score=473.28 Aligned_cols=394 Identities=32% Similarity=0.519 Sum_probs=322.9
Q ss_pred hcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEe
Q 012015 44 VSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (473)
Q Consensus 44 ~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 123 (473)
|.++++++ ||++|+++ ..++.+||+||.++++++|..|++ +|+++|++|+++++|+++++++++||+++|++++
T Consensus 1 f~~~a~~~----pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 1 FERQAQRY----PDRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHHHHHHS----TTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEE
T ss_pred ChhHHhhC----CCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeeccccccccccc
Confidence 35677788 99999999 338999999999999999999997 9999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhhcCCeEEEE----ccchHHHHh---c---CCCeEEEEcCCChh---hhhcccCCCccccccccC
Q 012015 124 PANPVNTESEISRQIQLSNPVIAFA----TSSVVHKLA---K---LKHRTILIDSPEFD---SMTMSWNSKHELDRAKVC 190 (473)
Q Consensus 124 ~l~~~~~~~~l~~~l~~~~~~~ii~----~~~~~~~~~---~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 190 (473)
|++|.++.+++.++++.++++++++ +......+. . .....+.++...+. .+....... ........
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSD-EPQSPEDS 153 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCH-CSHSTTHT
T ss_pred ccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccccc-ccccCCCC
Confidence 9999999999999999999999997 332222222 1 11224444432211 111110000 00000015
Q ss_pred CCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhh--ccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecC
Q 012015 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSF--ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR 267 (473)
Q Consensus 191 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~--~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~ 267 (473)
++++++++|||||||.||+|.++|+++........ ... ... +++++.+|++|.+++ ..++.++..|+++++.+.
T Consensus 154 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 230 (417)
T PF00501_consen 154 PDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSP 230 (417)
T ss_dssp TTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESS
T ss_pred ccceeEeecccccccccccccccccccccccccccccccc-ccC--ceEEeecccccccccccccccccccccccccccc
Confidence 68999999999999999999999999998877753 222 222 599999999999999 899999999999999987
Q ss_pred CC---HHHHHHHHHHcccceEEecHHHHHHHhcCCCC----CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 268 FD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 268 ~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
.+ ++.+++.++++++|.++++|+++..+++.... ...+++++|.++++|+++++++.+++++.++..++.+.|
T Consensus 231 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 310 (417)
T PF00501_consen 231 FDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLY 310 (417)
T ss_dssp HHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEE
T ss_pred ccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecc
Confidence 54 47789999999999999999999999983222 235788999999999999999999999999556999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCee
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 420 (473)
|+||++.+++...........+++|+|+++++++|+|+++++++++|+.|||+|+|+.++.||+++++.+.+.|..+|||
T Consensus 311 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~ 390 (417)
T PF00501_consen 311 GSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWY 390 (417)
T ss_dssp EEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEE
T ss_pred cccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccce
Confidence 99999998875432333346678999999999999997779999999999999999999999999999999999766899
Q ss_pred ecCceEEEccCCcEEEEeccCCeEEEc
Q 012015 421 RTGDLCYIDEDGFLFIVDRLKDLIKYK 447 (473)
Q Consensus 421 ~TgD~~~~~~~g~l~~~GR~~d~i~~~ 447 (473)
+|||+|++|+||+|+++||.||+||++
T Consensus 391 ~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 391 RTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999999999974
No 87
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-59 Score=482.63 Aligned_cols=423 Identities=22% Similarity=0.292 Sum_probs=343.9
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
..+.|+.+.+.+.++++ |+++|+++. ++.+||+||.++++++|.+|.+ .|+++||+|+++++|+.+++++++|
T Consensus 34 ~~~~tl~~~l~~~a~~~----p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA 106 (600)
T PRK08279 34 DSKRSLGDVFEEAAARH----PDRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLG 106 (600)
T ss_pred CCcccHHHHHHHHHHhC----CCCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 44579999999999999 999999997 8899999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC------CeEEEEcC------CChhhhhcccCCCc
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDS------PEFDSMTMSWNSKH 182 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~~ 182 (473)
|+++|++++|+++..+.+++.++++.+++++++++.+..+.+.+.. ..++..+. ..+.++........
T Consensus 107 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 107 LAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAP 186 (600)
T ss_pred HHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCC
Confidence 9999999999999999999999999999999999987766554321 11222211 11222221111100
Q ss_pred ---cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHH-HHHHHhhh
Q 012015 183 ---ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAAL 258 (473)
Q Consensus 183 ---~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~l~~l~~ 258 (473)
.........+++++++|||||||.||+|.++|+++...+......+ ...+++++++.+|++|.+++. .++.++..
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-RLTPDDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-CCCCCcEEEEecCchhhhhHHHHHHHHHhc
Confidence 1111233568899999999999999999999999999888777766 788999999999999999984 45567888
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~ 338 (473)
|+++++.+.+++..+++.++++++|++.++|++++.+............++|.+ +|+.+++++.++|.+.++...+++
T Consensus 266 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 266 GATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 888988888999999999999999999999999999987654444445667754 477899999999999996667999
Q ss_pred ecCCcccccccccccCCCCCCCCCCccccCC----CcEEEEEcCC--------CC--CCCCCCCccEEE--EecCccccc
Q 012015 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSA----GLEAKIVDPE--------TG--DSLPPGKEGELS--IRGPTIMKG 402 (473)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~----~~~~~i~d~~--------~~--~~~~~g~~Gel~--v~~~~~~~g 402 (473)
.||+||++..+... ....+++|.+.+ +..+...+.+ ++ .+++.|+.|||+ ++++.++.|
T Consensus 344 ~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 344 FYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred eecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccc
Confidence 99999987643321 123456776655 3333222212 22 357789999998 778999999
Q ss_pred cCCCccccccccC------CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 403 YVGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 403 y~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
| ++++.+.+.|. .++||+|||+|++++||++++.||.||+||++|++|+|.|||++|.++|+|.+|+|+|
T Consensus 419 Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~g 494 (600)
T PRK08279 419 Y-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYG 494 (600)
T ss_pred c-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEE
Confidence 9 88888877653 3579999999999999999999999999999999999999999999999999999974
No 88
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-59 Score=470.97 Aligned_cols=411 Identities=29% Similarity=0.375 Sum_probs=335.2
Q ss_pred cccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCC
Q 012015 47 LRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 47 ~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
.++.+ |+++|+++..+++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++|++
T Consensus 6 ~a~~~----p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 6 HAQIA----PDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAIN 80 (501)
T ss_pred hhhhC----CCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccc
Confidence 45556 999999886557899999999999999999998 8999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC--Ce-EEEEcCC-----ChhhhhcccCCCccccccccCCCCEEEEE
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK--HR-TILIDSP-----EFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 198 (473)
+.++.+++.++++.+++++++++........... .. .+.+... .+++.... . ........+.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~i~ 154 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAG-----A-GPRLTEQPCGAVML 154 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcc-----c-CCCCCCCcccEEEE
Confidence 9999999999999999999999876543322211 11 1111110 11111110 0 00111223569999
Q ss_pred ccCCCCCCcchhhh--cHHHHHHHH----HHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHH
Q 012015 199 YSSGTTGRVKGVML--THRNLTAAV----ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKM 272 (473)
Q Consensus 199 ~TSGtTG~PK~V~~--sh~~l~~~~----~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~ 272 (473)
|||||||.||+|.+ +|.++.... ......+ .....+++++.+|++|.+++...+..+..|+++++.+.+++..
T Consensus 155 ~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (501)
T PRK13390 155 YSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQA 233 (501)
T ss_pred eCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHH
Confidence 99999999999995 455544321 1111222 5678899999999999998855555677899999988899999
Q ss_pred HHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccc
Q 012015 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVF 350 (473)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 350 (473)
+++.|+++++|++.++|+++..+.+.... ....++++|.++.||+++++++.+.+.+.+ +..+++.||+||+++++.
T Consensus 234 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~ 312 (501)
T PRK13390 234 TLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTF 312 (501)
T ss_pred HHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEE
Confidence 99999999999999999999998875432 344578999999999999999999999987 788999999999987554
Q ss_pred cccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC--CCeeecCceEEE
Q 012015 351 RTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYI 428 (473)
Q Consensus 351 ~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~ 428 (473)
.... ......+++|+|+++ .++|+| ++++++++|+.|||+++|+.++.||+++++.+.+.+.. ++|++|||+|++
T Consensus 313 ~~~~-~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~ 389 (501)
T PRK13390 313 IDSP-DWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSV 389 (501)
T ss_pred ecch-hhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEE
Confidence 3221 122345789999999 799999 78999999999999999999999999999999887754 579999999999
Q ss_pred ccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 429 ~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+||++++.||.||+||++|++|+|.+||++|.++|.|.+|+|++
T Consensus 390 ~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~ 434 (501)
T PRK13390 390 DEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIG 434 (501)
T ss_pred CCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999999999999999999999975
No 89
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.4e-59 Score=560.29 Aligned_cols=419 Identities=23% Similarity=0.353 Sum_probs=365.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++.+ ||++|+++. ++++||+||.++++++|+.|++ .|+++|++|+++++++.+++++++|+++
T Consensus 1131 ~~l~~~~~~~a~~~----p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailk 1203 (4334)
T PRK05691 1131 AWLPELLNEQARQT----PERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILK 1203 (4334)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 57999999999999 999999998 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+|++++|++|.++.+++.+++++++++++|++......+... ....+.++....... . . ........++++++
T Consensus 1204 aG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~a~ 1277 (4334)
T PRK05691 1204 AGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDSW----P-S-QAPGLHLHGDNLAY 1277 (4334)
T ss_pred hCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeecccccccc----C-C-CCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766554432 122222222111110 0 0 11112345689999
Q ss_pred EEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec---CCCHHHH
Q 012015 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (473)
Q Consensus 197 i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~---~~~~~~~ 273 (473)
++|||||||.||||.++|+++.+.+.+....+ ...++++++...|++|..++..++.++..|+++++.+ .+++..+
T Consensus 1278 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l 1356 (4334)
T PRK05691 1278 VIYTSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRI 1356 (4334)
T ss_pred EEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHH
Confidence 99999999999999999999999888777776 6889999999999999999999999999999999985 3689999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccccccc
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 353 (473)
++.++++++|++.++|++++.+..... ...++++|.+++|||++++++.++|.+.+++++++|.||+||++..++...
T Consensus 1357 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 1434 (4334)
T PRK05691 1357 AELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQ 1434 (4334)
T ss_pred HHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeee
Confidence 999999999999999999999986532 235789999999999999999999999998899999999999987765432
Q ss_pred CCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-------CCeeecCceE
Q 012015 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGDLC 426 (473)
Q Consensus 354 ~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TgD~~ 426 (473)
.........++|+|+++++++|+| +.+++++.|..|||+|+|+++++||+++|+.|.+.|.. .+||+|||+|
T Consensus 1435 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~ 1513 (4334)
T PRK05691 1435 CQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRA 1513 (4334)
T ss_pred cccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceE
Confidence 222233456899999999999999 77999999999999999999999999999999998854 2499999999
Q ss_pred EEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 427 YIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 427 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++||+++++||+|++||++|++|+|.|||.+|.++|+|.+|+|++
T Consensus 1514 ~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~ 1560 (4334)
T PRK05691 1514 RWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLV 1560 (4334)
T ss_pred EECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999873
No 90
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=9.3e-60 Score=561.75 Aligned_cols=417 Identities=21% Similarity=0.289 Sum_probs=362.2
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|.++++++ ||++|+++. +..+||+||.++++++|+.|.+ .|+++|++|+|+++++.+++++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~----p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~-~gv~~~~~V~v~~~~s~~~~v~~lavlk 3792 (4334)
T PRK05691 3720 QSYVRLFEAQVAAH----PQRIAASCL--DQQWSYAELNRAANRLGHALRA-AGVGVDQPVALLAERGLDLLGMIVGSFK 3792 (4334)
T ss_pred cCHHHHHHHHHHhC----CCceEEEcC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-------CC-eEEEEcCCChhhhhcccCCCcccccccc
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KH-RTILIDSPEFDSMTMSWNSKHELDRAKV 189 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (473)
+|+++||++|.++.+++.+++++++++++|++.......... .. .++..+. ........ .......
T Consensus 3793 aG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~ 3866 (4334)
T PRK05691 3793 AGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE-----VQAGEVAS-HNPGIYS 3866 (4334)
T ss_pred hCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc-----cccccccc-cCCCCCC
Confidence 999999999999999999999999999999988654332211 01 1111111 10100000 1112234
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC--
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-- 267 (473)
.+++.+|++|||||||.||||+++|+++.+.+.+....+ ...+.++++...++.+..++..++.++..|+++++.+.
T Consensus 3867 ~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~ 3945 (4334)
T PRK05691 3867 GPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAI 3945 (4334)
T ss_pred CCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccc
Confidence 678999999999999999999999999999998877777 78999999999999999999999999999999999864
Q ss_pred -CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccc
Q 012015 268 -FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTEST 346 (473)
Q Consensus 268 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~ 346 (473)
.++..+++.++++++|++.++|+++..++... ...+++||.+++|||++++++.++|.+.+++++++|.||+||++
T Consensus 3946 ~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 4022 (4334)
T PRK05691 3946 AHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECS 4022 (4334)
T ss_pred cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccce
Confidence 57899999999999999999999999887543 23478999999999999999999999988899999999999998
Q ss_pred cccccccCCCCC--CCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-------C
Q 012015 347 AGVFRTVGPDEC--RRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------D 417 (473)
Q Consensus 347 ~~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~ 417 (473)
..++........ ....++|+|++|++++|+| +.+++++.|..|||+|+|+.+++||+++|+.|+++|.+ +
T Consensus 4023 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~ 4101 (4334)
T PRK05691 4023 DDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGE 4101 (4334)
T ss_pred eEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCc
Confidence 876543322211 1235799999999999999 88999999999999999999999999999999999864 3
Q ss_pred CeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEc
Q 012015 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 418 ~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
+||+|||+|++++||+|+++||.|++||++|+||++.|||.+|.++|+|.+|+|+
T Consensus 4102 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~ 4156 (4334)
T PRK05691 4102 RLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVA 4156 (4334)
T ss_pred eeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEE
Confidence 6999999999999999999999999999999999999999999999999999885
No 91
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-58 Score=471.69 Aligned_cols=424 Identities=23% Similarity=0.363 Sum_probs=341.0
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+|...++...++.+ |+++|+++. +.++||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 20 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~~ 92 (567)
T PLN02479 20 LTPLWFLERAAVVH----PTRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVPM 92 (567)
T ss_pred cCHHHHHHHHHhhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHh
Confidence 67888888888888 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhc------------CCC-eEEEEcCC---------------
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------------LKH-RTILIDSP--------------- 169 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------------~~~-~~~~~~~~--------------- 169 (473)
+|++++|+++.++.+++.++++.++++++++++...+...+ ... .++.+...
T Consensus 93 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
T PLN02479 93 AGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGA 172 (567)
T ss_pred CCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCc
Confidence 99999999999999999999999999999998876543221 011 12222211
Q ss_pred -ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHh
Q 012015 170 -EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYG 248 (473)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 248 (473)
.+.+++...... .........++.++++|||||||.||+|+++|+++..........+ ....+++.++.+|++|.++
T Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~ 250 (567)
T PLN02479 173 IEYEKFLETGDPE-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GMNEGAVYLWTLPMFHCNG 250 (567)
T ss_pred ccHHHHHhccccc-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CCCCCCEEEEecchhhhhh
Confidence 122222111100 0001112234677899999999999999999999876655444444 5678899999999999999
Q ss_pred HHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCC-CCCCCceEEEecCCCCCHHHHHHH
Q 012015 249 LFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG-YDLSSLETVACGAAPLGKDTIMAF 327 (473)
Q Consensus 249 ~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~l~~lr~v~~~G~~l~~~~~~~~ 327 (473)
+...+.....++..+....+++..+++.++++++|++.++|+++..+.+...... ..++++|.++++|+++++++.++|
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~ 330 (567)
T PLN02479 251 WCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAM 330 (567)
T ss_pred HHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHH
Confidence 8555444444555555667899999999999999999999999999987643322 257899999999999999999999
Q ss_pred HHhCCCCeEEeecCCcccccccccccCCC---------CCCCCCCccccCCCcE-EEEEcCCCCCCCCCC--CccEEEEe
Q 012015 328 ASKFPKVVLVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLE-AKIVDPETGDSLPPG--KEGELSIR 395 (473)
Q Consensus 328 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~ 395 (473)
.+. +.++++.||+||+++.+....... ......+.|.+.++++ ++|+|++++.+++.+ +.|||+++
T Consensus 331 ~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~ 408 (567)
T PLN02479 331 SEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMR 408 (567)
T ss_pred Hhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEe
Confidence 875 789999999999865433211000 0011135688888876 889987778888764 67999999
Q ss_pred cCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 396 GPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 396 ~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
|+.++.||+++++.+.+.| .+|||+|||+|++|++|+++++||.||+||++|++|+|.+||.+|.++|.|.+|+|+|
T Consensus 409 g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 485 (567)
T PLN02479 409 GNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVA 485 (567)
T ss_pred ccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEe
Confidence 9999999999999999988 5899999999999999999999999999999999999999999999999999999985
No 92
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.2e-59 Score=470.37 Aligned_cols=423 Identities=23% Similarity=0.342 Sum_probs=347.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA 114 (473)
+.++.+++.+.++.+ |+++++.+... .+.+||.||.++++++|++|.+ .|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la 83 (539)
T PRK07008 9 PLLISSLIAHAARHA----GDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYG 83 (539)
T ss_pred CCCHHHHHHHHHhhC----CCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 367899999888888 88888876322 3689999999999999999999 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCe-EEEEcC-----------CChhhhhcc
Q 012015 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS-----------PEFDSMTMS 177 (473)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~-----------~~~~~~~~~ 177 (473)
|+++|++++|++|.++.+++..+++.+++++++++.+..+.+.+. ... ++.+.. ..++++...
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (539)
T PRK07008 84 VSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGA 163 (539)
T ss_pred HHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcc
Confidence 999999999999999999999999999999999998766544321 111 122211 012222111
Q ss_pred cCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHH--hhccCCCCCCCcEEEEecChhhHHhHHHHHHH
Q 012015 178 WNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS--SFASSPKRVSPAVMLFTMPYFHIYGLFFCFRA 255 (473)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~--~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~ 255 (473)
... ........++++++++|||||||.||+|.+||++++..... ....+ +..+++++++.+|++|..++...+.+
T Consensus 164 ~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~~~~~~~~~ 240 (539)
T PRK07008 164 QDG--DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDAVLPVVPMFHVNAWGLPYSA 240 (539)
T ss_pred cCC--CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCceEEecCchHHhhhHHHHHHH
Confidence 110 11122345678999999999999999999999998754322 22333 67788999999999998887666788
Q ss_pred hhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCC
Q 012015 256 AALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV 334 (473)
Q Consensus 256 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 334 (473)
+..|+++++.+ .+++..+++.++++++|++.++|+++..+.+.......+++++|.++++|+++++++.+++.+.+ +.
T Consensus 241 l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~ 319 (539)
T PRK07008 241 PLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GV 319 (539)
T ss_pred HhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CC
Confidence 99999999874 57999999999999999999999999999987766666789999999999999999999999988 78
Q ss_pred eEEeecCCcccccccccccCCC---------CCCCCCCccccCCCcEEEEEcCCCCCCCCCC--CccEEEEecCcccccc
Q 012015 335 VLVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKGY 403 (473)
Q Consensus 335 ~~~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy 403 (473)
++++.||+||++..+....... ......++|+|+|+++++|+| +++++++.+ +.|||+++|+.++.||
T Consensus 320 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy 398 (539)
T PRK07008 320 EVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRY 398 (539)
T ss_pred ceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhh
Confidence 9999999999987544321100 011235789999999999999 677777753 5799999999999999
Q ss_pred CCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 404 VGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++++. ..+ .+|||+|||+|++++||+++++||.+|+||.+|.+|+|.+||.+|.++|.|.+|+|+|
T Consensus 399 ~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~ 464 (539)
T PRK07008 399 FRGDA---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIA 464 (539)
T ss_pred cCChh---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEe
Confidence 99883 234 3789999999999999999999999999999999999999999999999999999985
No 93
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-58 Score=461.80 Aligned_cols=389 Identities=28% Similarity=0.365 Sum_probs=332.6
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 012015 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (473)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 135 (473)
++++|+++. ++++||+||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++..+.+++.
T Consensus 14 ~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~------~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 14 DIADAVRIG--GRVLSRSDLAGAATAVAERVA------GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred CCceEEEeC--CcEEEHHHHHHHHHHHHHHhc------cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 889999997 899999999999999999986 359999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHH
Q 012015 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (473)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~ 215 (473)
++++++++++++++.+... . ........... .. ........++++++++|||||||.||+|.++|+
T Consensus 86 ~~l~~~~~~~il~~~~~~~--~--~~~~~~~~~~~-----~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~ 151 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP--A--GLPHVPVRLHA-----RS-----WHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRR 151 (471)
T ss_pred HHHHhcCCCEEEecCCccc--c--cccceeeeccc-----cc-----cccCCCCCCCceEEEEECCCCCCCCCEEEEeHH
Confidence 9999999999999764210 0 01111110000 00 001112356889999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHH
Q 012015 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (473)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 294 (473)
++...+......+ ...+++++++.+|++|.+|+ ..++.++..|+++++...+++..+++.++ +++|++.++|+++..
T Consensus 152 ~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~ 229 (471)
T PRK07787 152 AIAADLDALAEAW-QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSR 229 (471)
T ss_pred HHHHHHHHHHHhc-CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHH
Confidence 9998887766666 57788999999999999988 56889999999999998899999999999 999999999999999
Q ss_pred HhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEE
Q 012015 295 MSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (473)
Q Consensus 295 l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 374 (473)
+.+.... ...++++|.+++||+++++++.++|.+.+ +.++++.||+||++...... .......+++|+|+++++++
T Consensus 230 l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~g~~~~ 305 (471)
T PRK07787 230 IAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR--ADGERRPGWVGLPLAGVETR 305 (471)
T ss_pred HHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC--CCCcccCCcccccCCCcEEE
Confidence 9875432 33578999999999999999999999988 78999999999998654332 22233457899999999999
Q ss_pred EEcCCCCCCCC-CCC-ccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEecc-CCeEEEcCeee
Q 012015 375 IVDPETGDSLP-PGK-EGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL-KDLIKYKGYQV 451 (473)
Q Consensus 375 i~d~~~~~~~~-~g~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~-~d~i~~~G~~v 451 (473)
|+| +++++++ .|+ .|||+++|+.++.||+++++.+.+.|..++||+|||+|++++||+++++||+ |+++|.+|++|
T Consensus 306 i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v 384 (471)
T PRK07787 306 LVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRI 384 (471)
T ss_pred EEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEE
Confidence 999 5678887 343 7999999999999999999999999988999999999999999999999996 89999999999
Q ss_pred ChHHHHHHHhcCCCcceEEEcC
Q 012015 452 APAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 452 ~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|.+||++|.+++.|++++|+|
T Consensus 385 ~~~eIE~~l~~~~~v~~~~v~~ 406 (471)
T PRK07787 385 GAGEIETALLGHPGVREAAVVG 406 (471)
T ss_pred CHHHHHHHHHhCCCcceEEEEc
Confidence 9999999999999999999985
No 94
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-58 Score=472.55 Aligned_cols=427 Identities=23% Similarity=0.329 Sum_probs=351.4
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECC-CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSV-TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
++|+.++|...+..+ |+++|+++.. .++.+||+||.++++++|++|.+..|+++||+|+++++|+.+++++++||
T Consensus 9 ~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 9 PLSLTRILEYGSTVH----GDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred CCcHHHHHHHHHHhC----CCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 379999999999988 9999998752 24799999999999999999985479999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CC-eEEEEcCCC----------------hhh
Q 012015 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE----------------FDS 173 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~----------------~~~ 173 (473)
+++|++++|++|+++.+++.++++.++++++|+++...+.+.+. .. .++.++... +.+
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEA 164 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHH
Confidence 99999999999999999999999999999999998766654321 11 123333211 222
Q ss_pred hhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHh--hccCCCCCCCcEEEEecChhhHHhHHH
Q 012015 174 MTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS--FASSPKRVSPAVMLFTMPYFHIYGLFF 251 (473)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~--~~~~~~~~~~~~~l~~~pl~~~~g~~~ 251 (473)
+..... . ........++++++++|||||||.||+|.++|+++....... ...+ ....++++++.+|++|.+++..
T Consensus 165 l~~~~~-~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~ 241 (576)
T PRK05620 165 LLDGRS-T-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGESFLCCVPIYHVLSWGV 241 (576)
T ss_pred HhhcCC-C-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCCeEEEeCChHHhhhhHH
Confidence 222111 0 111223456889999999999999999999999986554332 2233 5678899999999999999988
Q ss_pred HHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHh
Q 012015 252 CFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (473)
Q Consensus 252 ~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 330 (473)
.+.++..|+++++.. .+++..+++.|+++++|+++++|+++..++...........++|.+++||+++++++.++|.+.
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~ 321 (576)
T PRK05620 242 PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEER 321 (576)
T ss_pred HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHH
Confidence 889999999998875 5789999999999999999999999988876543333345689999999999999999999998
Q ss_pred CCCCeEEeecCCcccccccccccCCCC------CCCCCCccccCCCcEEEEEcCCCCCCCC--CCCccEEEEecCccccc
Q 012015 331 FPKVVLVQAYGLTESTAGVFRTVGPDE------CRRWGSTGRLSAGLEAKIVDPETGDSLP--PGKEGELSIRGPTIMKG 402 (473)
Q Consensus 331 ~~~~~~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~G~p~~~~~~~i~d~~~~~~~~--~g~~Gel~v~~~~~~~g 402 (473)
+ ++++++.||+||++..+........ .....++|++.++++++++| + +..++ ++..|||+++|+.++.|
T Consensus 322 ~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~g 398 (576)
T PRK05620 322 Y-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTAS 398 (576)
T ss_pred h-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCccccc
Confidence 8 7899999999999876554322110 01224789999999999999 4 66554 46889999999999999
Q ss_pred cCCCcccc----------------ccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCc
Q 012015 403 YVGEPEVT----------------SATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREV 466 (473)
Q Consensus 403 y~~~~~~~----------------~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v 466 (473)
|+++++.+ ...+..+|||+|||++++++||++++.||.+|+||.+|.+|++.+||.+|.+||.|
T Consensus 399 Y~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v 478 (576)
T PRK05620 399 YYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEV 478 (576)
T ss_pred ccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCc
Confidence 99999887 23344678999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcC
Q 012015 467 ADAAVIP 473 (473)
Q Consensus 467 ~~~~vvg 473 (473)
.+|+|+|
T Consensus 479 ~~~~vv~ 485 (576)
T PRK05620 479 VECAVIG 485 (576)
T ss_pred eEEEEEe
Confidence 9999985
No 95
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=7.8e-58 Score=463.50 Aligned_cols=424 Identities=29% Similarity=0.435 Sum_probs=349.3
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+++.+.++.+ |+++|+++. ++.+||.||.++++++|.+|.+ .|+++||+|+++++|+.+++++++||++
T Consensus 21 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 21 GTLPDLLSKAAADY----GPRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCHHHHHHHHHHHc----CCCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 58999999999998 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch--HHHHhc-----CCCeEEEEcCCC-------------------h
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--VHKLAK-----LKHRTILIDSPE-------------------F 171 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~-----~~~~~~~~~~~~-------------------~ 171 (473)
+|++++|++|..+.+++.++++.++++++++++.. .....+ .....++.+... +
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccH
Confidence 99999999999999999999999999999997631 111111 111222222111 1
Q ss_pred hhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC----CCCCCCcEEEEecChhhHH
Q 012015 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPYFHIY 247 (473)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~----~~~~~~~~~l~~~pl~~~~ 247 (473)
.++.... ..........++++++++|||||||.||+|.++|+++........... ......+++++.+|++|.+
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 174 ADFVKGA--AAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHhcC--CCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHH
Confidence 1111100 001111234567899999999999999999999999876543221110 0123457899999999998
Q ss_pred hH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHH
Q 012015 248 GL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMA 326 (473)
Q Consensus 248 g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 326 (473)
++ ..++.++..|+++++...+++..+++.|+++++|++.++|+++..+.+........++++|.+++||+++++++.++
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~ 331 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANF 331 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHH
Confidence 88 55778889999998888889999999999999999999999999988765444556789999999999999999999
Q ss_pred HHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcC-CCCCCCCCCCccEEEEecCccccccCC
Q 012015 327 FASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDP-ETGDSLPPGKEGELSIRGPTIMKGYVG 405 (473)
Q Consensus 327 ~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~~~~~gy~~ 405 (473)
+.+.+ +.++++.||+||++.+++.... ......+++|.|++++.++|++. +.+++++.|+.|||+++|+.++.||++
T Consensus 332 ~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 332 FERKT-GLKLKSGWGMTETCSPGTGHPP-EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHHh-CCCeecccccccCCcccccCCC-CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccC
Confidence 98887 7899999999999876654322 12234568999999999887642 667889999999999999999999999
Q ss_pred CccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 406 EPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++.+.+.| .++||+|||+++++++|+++++||.||+||++|++|+|.+||.++.+++.|.+|+|+|
T Consensus 410 ~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 476 (541)
T TIGR03205 410 RPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIG 476 (541)
T ss_pred ChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 999998887 4789999999999999999999999999999999999999999999999999999874
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-57 Score=463.23 Aligned_cols=425 Identities=30% Similarity=0.479 Sum_probs=352.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.++|...++++ |+++|+++. ++++||+||.++++++|.+|.++.|+++|++|+++++|+++++++++||++
T Consensus 23 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 23 QSLVDMFEQAVARY----ADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred ccHHHHHHHHHHhC----CCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57999999888888 999999987 889999999999999999998437999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----CCeEEEEcC--CC---------------------
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDS--PE--------------------- 170 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~--~~--------------------- 170 (473)
+|++++|++|..+.+++.++++.+++++++++++..+.+.+. ..+.+.... ..
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVP 176 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccc
Confidence 999999999999999999999999999999987654433321 111111110 00
Q ss_pred ---------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC--CCCCCcEEEE
Q 012015 171 ---------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLF 239 (473)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~--~~~~~~~~l~ 239 (473)
+.+...... ...........+++++++|||||||.||+|.++|+++..........+. .....+.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 177 KYHLPDAISFRSALHKGR-RMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred cccCCCcccHHHHhhccC-CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 000000000 0001112245688999999999999999999999999876654332221 2345678889
Q ss_pred ecChhhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCC
Q 012015 240 TMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (473)
Q Consensus 240 ~~pl~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~ 317 (473)
.+|++|.+++ ...+.++..|+++++.. ..++..+++.++++++|.+.++|+++..+..........++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 9999999887 55677788898877764 568899999999999999999999999998876555667889999999999
Q ss_pred CCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecC
Q 012015 318 PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (473)
Q Consensus 318 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 397 (473)
++++.+.++|++.+ ++++++.||+||++.++..... ......+++|.|+++++++|+| +++++++.|+.|||+++|+
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPY-DLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCC-CCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999999999987 8899999999999877655322 1223457899999999999999 6789999999999999999
Q ss_pred ccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 398 TIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.++.||+++++.+.+.| .+|||+|||+++++++|+++++||.+|+|+++|.+|+|.+||.+|.++|+|.+|+|++
T Consensus 413 ~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 487 (560)
T PRK08974 413 QVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVG 487 (560)
T ss_pred CcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99999999999998887 6899999999999999999999999999999999999999999999999999999874
No 97
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.7e-58 Score=462.70 Aligned_cols=420 Identities=23% Similarity=0.345 Sum_probs=356.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+|+.+.|.+.++.+ |+++|+.+. ++++||+||.++++++|..|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~ 74 (503)
T PRK04813 2 MDIIETIEEFAQTQ----PDFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVK 74 (503)
T ss_pred chHHHHHHHHHHhC----CCceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 57889999999988 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 197 (473)
+|++++|+++.++.+++.++++..++++++++.+... .......+.. .++....... ..........+++++++
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~i 148 (503)
T PRK04813 75 AGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL--EILGIPVITL--DELKDIFATG--NPYDFDHAVKGDDNYYI 148 (503)
T ss_pred cCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc--cccCCcEEeh--HHhhhhhhcc--ccccccccCCCCCcEEE
Confidence 9999999999999999999999999999999876521 1111112211 1111111100 00111223456789999
Q ss_pred EccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC---CCHHHHH
Q 012015 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (473)
Q Consensus 198 ~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~---~~~~~~~ 274 (473)
+|||||||.||+|.++|+++..........+ .....++++...|++|..++..++.++..|+++++.+. .++..++
T Consensus 149 ~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~ 227 (503)
T PRK04813 149 IFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLF 227 (503)
T ss_pred EECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHH
Confidence 9999999999999999999998887766666 67888999999999999988888899999999998875 5889999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccC
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 354 (473)
+.+++++++.+..+|++++.+..........++++|.++++|+++++.+.+++.+.++++.+++.||+||++..+.....
T Consensus 228 ~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 307 (503)
T PRK04813 228 ETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEI 307 (503)
T ss_pred HHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEe
Confidence 99999999999999999988766544445568899999999999999999999999988999999999999765543222
Q ss_pred CC---CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-C--CeeecCceEEE
Q 012015 355 PD---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-D--GWMRTGDLCYI 428 (473)
Q Consensus 355 ~~---~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-~--~~~~TgD~~~~ 428 (473)
.. ......++|++.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.|.. + +||+|||+|++
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~ 386 (503)
T PRK04813 308 TDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL 386 (503)
T ss_pred cccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe
Confidence 11 122345799999999999999 78999999999999999999999999999999877633 3 59999999999
Q ss_pred ccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 429 ~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++|++++.||.+|+|+++|++|++.+||+++.++|.|++|+|+|
T Consensus 387 -~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 430 (503)
T PRK04813 387 -EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVP 430 (503)
T ss_pred -eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEE
Confidence 99999999999999999999999999999999999999999974
No 98
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-58 Score=464.09 Aligned_cols=425 Identities=24% Similarity=0.356 Sum_probs=348.1
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEEC--CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINS--VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~--~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~ 112 (473)
+.++++.+++.+.++.+ ||+++++.. +..+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++
T Consensus 7 ~~~~~~~~~~~~~a~~~----~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~ 81 (542)
T PRK06018 7 DWPLLCHRIIDHAARIH----GNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAW 81 (542)
T ss_pred cCCCCHHHHHHHHHHhC----CCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHH
Confidence 34489999999999999 999999853 224789999999999999999999 89999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CC-eEEEEcCC------------Chhhh
Q 012015 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP------------EFDSM 174 (473)
Q Consensus 113 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~------------~~~~~ 174 (473)
+||+++|++++|+++.++.+++..+++.+++++++++.+....+.+. .. .++.+... .+.++
T Consensus 82 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (542)
T PRK06018 82 YGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEW 161 (542)
T ss_pred HHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHH
Confidence 99999999999999999999999999999999999998766554321 11 12222211 11222
Q ss_pred hcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHH-HHHHH-hhccCCCCCCCcEEEEecChhhHHhHHHH
Q 012015 175 TMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLT-AAVAS-SFASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (473)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~-~~~~~-~~~~~~~~~~~~~~l~~~pl~~~~g~~~~ 252 (473)
..... ..........+++++++|||||||.||+|.+||++.+ ..... ....+ +...+++++..+|++|.+++...
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~h~~~~~~~ 238 (542)
T PRK06018 162 IAEAD--GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAADTMLPVVPLFHANSWGIA 238 (542)
T ss_pred hccCC--cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCCEEEEecCHHHHhhhHHH
Confidence 11111 0111123455779999999999999999999999743 22222 22233 57788999999999999988766
Q ss_pred HHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhC
Q 012015 253 FRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKF 331 (473)
Q Consensus 253 l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~ 331 (473)
+.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++++.++|++ +
T Consensus 239 ~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~ 317 (542)
T PRK06018 239 FSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M 317 (542)
T ss_pred HhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h
Confidence 78889999998864 578899999999999999999999999998877666667899999999999999999999999 6
Q ss_pred CCCeEEeecCCcccccccccccCCCC---------CCCCCCccccCCCcEEEEEcCCCCCCCCCC--CccEEEEecCccc
Q 012015 332 PKVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIM 400 (473)
Q Consensus 332 ~~~~~~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~ 400 (473)
+.++++.||+||++.++........ .....++|+|.++++++|+| +++++++.+ ..|||+++|+.++
T Consensus 318 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~ 395 (542)
T PRK06018 318 -GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVA 395 (542)
T ss_pred -CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcc
Confidence 8999999999999876554211110 01235789999999999999 678877753 5799999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.||++. +...++.++||+|||+++++++|++++.||.+|+|+++|.+|++.+||.++.++|.|.+|+|+|
T Consensus 396 ~gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 465 (542)
T PRK06018 396 AAYYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIG 465 (542)
T ss_pred hhhhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEe
Confidence 999983 2344557899999999999999999999999999999999999999999999999999999985
No 99
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=9.6e-58 Score=459.64 Aligned_cols=419 Identities=21% Similarity=0.325 Sum_probs=351.6
Q ss_pred HHHHhccc-ccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHh
Q 012015 40 AVDYVSSL-RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (473)
Q Consensus 40 l~~~~~~~-~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 118 (473)
..+.+.+. ++.+ ||++|+++. +..+||.||.++++++|++|.+ .|+++|++|+++++|+.+++++++||+++
T Consensus 6 ~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~~~~ 78 (508)
T TIGR02262 6 AEDLLDRNVVEGR----GGKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGAIRA 78 (508)
T ss_pred HHHHHHHHHhccc----CCceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 34444444 4557 999999987 8899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----C-CeEEEEcCC-----ChhhhhcccCCCcccccc
Q 012015 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDSP-----EFDSMTMSWNSKHELDRA 187 (473)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 187 (473)
|++++|+++.++.+++.++++.+++++++++......+... . ..++..+.. .+.+...... . .....
T Consensus 79 G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 156 (508)
T TIGR02262 79 GIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATES-E-QFKPA 156 (508)
T ss_pred CcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCC-C-ccCCC
Confidence 99999999999999999999999999999998766554321 1 112222221 1222211111 0 11122
Q ss_pred ccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHH-hhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEe
Q 012015 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (473)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~-~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~ 265 (473)
...++++++++|||||||.||+|.++|+++...... ....+ +..++++++..+|++|.+++ ..++.++..|+++++.
T Consensus 157 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 235 (508)
T TIGR02262 157 ATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM 235 (508)
T ss_pred CCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe
Confidence 345688999999999999999999999999887765 23333 67889999999999999988 5567789999999887
Q ss_pred cC-CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcc
Q 012015 266 QR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (473)
Q Consensus 266 ~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE 344 (473)
+. +++..+++.|+++++|.+.++|.++..+++..........++|.+++||+++++++.+.|.+.+ ++++++.||+||
T Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 314 (508)
T TIGR02262 236 GERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTE 314 (508)
T ss_pred CCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccc
Confidence 64 6899999999999999999999999888776543344567899999999999999999999998 789999999999
Q ss_pred cccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCc
Q 012015 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (473)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD 424 (473)
++.+++... ......+++|+|++++.++++| +++.++++|+.|||+++|+.++.||+++++.+...| .++||+|||
T Consensus 315 ~~~~~~~~~--~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD 390 (508)
T TIGR02262 315 MLHIFLSNL--PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGD 390 (508)
T ss_pred cCceeecCC--ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccc
Confidence 987655422 1223456899999999999999 889999999999999999999999999999998877 579999999
Q ss_pred eEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 425 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+++++++|.+++.||.+|++|++|.+|++.+||++|.++++|.++++++
T Consensus 391 ~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~ 439 (508)
T TIGR02262 391 KYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVG 439 (508)
T ss_pred eEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999874
No 100
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.9e-57 Score=444.04 Aligned_cols=394 Identities=27% Similarity=0.349 Sum_probs=337.0
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
||.||.+.++++|+.|.++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999757999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC
Q 012015 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (473)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~ 230 (473)
.....+................. ..... ...........+++++++|||||||.||+|.++|+++..........+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~-~ 157 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELAA-LDDAP-APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRY-G 157 (408)
T ss_pred chhhhccccCCceEEechhhhhh-ccccc-ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhc-C
Confidence 87776654433333333211111 11100 001111113468899999999999999999999999998888877766 6
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCC---HHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCC
Q 012015 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (473)
Q Consensus 231 ~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 307 (473)
....+++++..|++|.+++..++.++..|+++++.+... +..+.+.++++++|.+.++|.+++.+.+... ..++
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~ 234 (408)
T TIGR01733 158 LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALA 234 (408)
T ss_pred CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hccc
Confidence 778899999999999999999999999999999987643 5889999999999999999999999988754 4578
Q ss_pred CceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC-CC--CCCCccccCCCcEEEEEcCCCCCCC
Q 012015 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE-CR--RWGSTGRLSAGLEAKIVDPETGDSL 384 (473)
Q Consensus 308 ~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~--~~~~~G~p~~~~~~~i~d~~~~~~~ 384 (473)
++|.+++||+++++++.+++.+.+++..+.+.||+||++.++........ .. ...++|+|.++++++|+|+ .++++
T Consensus 235 ~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~ 313 (408)
T TIGR01733 235 SLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDD-DLRPV 313 (408)
T ss_pred CceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECC-CCCCC
Confidence 99999999999999999999999966999999999999987753221111 11 2678999999999999995 48999
Q ss_pred CCCCccEEEEecCccccccCCCccccccccCCC------C--eeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHH
Q 012015 385 PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------G--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAEL 456 (473)
Q Consensus 385 ~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~I 456 (473)
+.|+.|||+++|+.++.||+++++.+.+.|..+ + ||+|||++++|++|++++.||.+|+++++|++++|.+|
T Consensus 314 ~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~i 393 (408)
T TIGR01733 314 PVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEI 393 (408)
T ss_pred CCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHH
Confidence 999999999999999999999999998877543 2 99999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceEEE
Q 012015 457 EHLLLSHREVADAAV 471 (473)
Q Consensus 457 E~~l~~~~~v~~~~v 471 (473)
|++|.+++.|.+|+|
T Consensus 394 e~~l~~~~~v~~~~v 408 (408)
T TIGR01733 394 EAALLRHPGVREAVV 408 (408)
T ss_pred HHHHhcCcchhhhcC
Confidence 999999999999986
No 101
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.9e-57 Score=456.55 Aligned_cols=424 Identities=25% Similarity=0.363 Sum_probs=343.2
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
++..+.+.+.++.+ |+++|+.+. +..+||+||.++++++|.+|.+ .|+++||+|+++++|+++++++++||++
T Consensus 18 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~ 90 (545)
T PRK08162 18 LTPLSFLERAAEVY----PDRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPM 90 (545)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 68889999999988 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----C-CeEEEEcC--C-----------ChhhhhcccC
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K-HRTILIDS--P-----------EFDSMTMSWN 179 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~-~~~~~~~~--~-----------~~~~~~~~~~ 179 (473)
+|++++|++++++.+++.++++.+++++++++.+..+.+.+. . .+.+.++. . ++..+.....
T Consensus 91 ~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (545)
T PRK08162 91 AGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGD 170 (545)
T ss_pred hCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCC
Confidence 999999999999999999999999999999998876654421 1 11222221 1 1222211110
Q ss_pred CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhc
Q 012015 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (473)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G 259 (473)
.. ..........+.++++|||||||.||+|+++|+++........... ....+++.++.+|++|.+++...+.....|
T Consensus 171 ~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~ 248 (545)
T PRK08162 171 PD-FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYLWTLPMFHCNGWCFPWTVAARA 248 (545)
T ss_pred cc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeEeccCcHhhhhHHHHHHHHHHc
Confidence 00 0011122345789999999999999999999998876655444444 466788999999999999985555555677
Q ss_pred CeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEee
Q 012015 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (473)
Q Consensus 260 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~ 339 (473)
++.++...+++..+++.++++++|++.++|+++..|++........+.+.+.++++|+++++++.+.+.+. +.++++.
T Consensus 249 g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 249 GTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred cEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 77777778899999999999999999999999999988654443445667778899999999999998875 7899999
Q ss_pred cCCcccccccccccCCCC---------CCCCCCccccCC-CcEEEEEcCCCCCCCCC-C-CccEEEEecCccccccCCCc
Q 012015 340 YGLTESTAGVFRTVGPDE---------CRRWGSTGRLSA-GLEAKIVDPETGDSLPP-G-KEGELSIRGPTIMKGYVGEP 407 (473)
Q Consensus 340 yG~tE~~~~~~~~~~~~~---------~~~~~~~G~p~~-~~~~~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gy~~~~ 407 (473)
||+||+++.+........ .....+.|.+.+ +..++|+|++++.+++. | ..|||+++|+.++.||++++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCCh
Confidence 999998654443211110 011245666655 33578889778888876 3 46999999999999999999
Q ss_pred cccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 408 EVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 408 ~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.+...| .+|||+|||+|++|+||+++++||.||++|++|++|+|.+||.+|.++|.|.+|+|++
T Consensus 407 ~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~ 471 (545)
T PRK08162 407 KATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVA 471 (545)
T ss_pred hhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEe
Confidence 9999888 5799999999999999999999999999999999999999999999999999999975
No 102
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=465.14 Aligned_cols=419 Identities=24% Similarity=0.335 Sum_probs=328.5
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
+++.+.|.+.++.+ |+++|+++.. ..+++||+||.++++++|++|.+ .| .+||+|+++++|++++++
T Consensus 1 ~s~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~ 74 (578)
T PRK05850 1 SSVPSLLRERASLQ----PDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIV 74 (578)
T ss_pred CcHHHHHHHHHhcC----CCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHH
Confidence 36788899889888 9999998631 13789999999999999999998 88 689999999999999999
Q ss_pred HHHHHHHhCCeEecCCC---CCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-------CC-eEEEEcCCChhhhhcccC
Q 012015 111 LYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KH-RTILIDSPEFDSMTMSWN 179 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 179 (473)
+++||+++|++++|+++ ..+.+++.++++++++++++++++..+.+... .. .++.++...+. .
T Consensus 75 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 148 (578)
T PRK05850 75 AFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLD------S 148 (578)
T ss_pred HHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccc------c
Confidence 99999999999999997 55789999999999999999998776655421 01 12222211110 0
Q ss_pred CCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCC-----CCCCCcEEEEecChhhHHhH-HHHH
Q 012015 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSPAVMLFTMPYFHIYGL-FFCF 253 (473)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~g~-~~~l 253 (473)
.. ........++++++++|||||||.||+|.++|+++............ ....++++++.+|++|..++ ..++
T Consensus 149 ~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 227 (578)
T PRK05850 149 PR-GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVC 227 (578)
T ss_pred CC-ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHH
Confidence 00 11112345688999999999999999999999999877655433210 13567899999999999998 5688
Q ss_pred HHhhhcCeEEEecCC----CHHHHHHHHHHcccceEEecHHHHHHHhcCCC---CCCCCCCCceEEEecCCCCCHHHHHH
Q 012015 254 RAAALMETAVVMQRF----DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIMA 326 (473)
Q Consensus 254 ~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~l~~lr~v~~~G~~l~~~~~~~ 326 (473)
.++..|+++++.+++ ++..+++.+++++++....++..+..+..... ....+++++|.+++||+++++++.++
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~ 307 (578)
T PRK05850 228 APILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKR 307 (578)
T ss_pred HHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEeCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHH
Confidence 999999999998642 78999999999999865444344444433221 12345789999999999999999999
Q ss_pred HHHhCC-----CCeEEeecCCcccccccccccCCCC-----------------------CCCCCCccccCCCcEEEEEcC
Q 012015 327 FASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-----------------------CRRWGSTGRLSAGLEAKIVDP 378 (473)
Q Consensus 327 ~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~-----------------------~~~~~~~G~p~~~~~~~i~d~ 378 (473)
|.+.|+ +..+.+.||+||++..+........ .....++|.|. +.+++++|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~ 386 (578)
T PRK05850 308 FADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDP 386 (578)
T ss_pred HHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcC
Confidence 988762 3478999999998754433111000 00011345554 578999997
Q ss_pred CCCCCCCCCCccEEEEecCccccccCCCccccccccCC-----------CCeeecCceEEEccCCcEEEEeccCCeEEEc
Q 012015 379 ETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYK 447 (473)
Q Consensus 379 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~ 447 (473)
+++.+++.|+.|||+++|+.++.||+++++.+.+.|.. ++||+|||+|+++ ||+|++.||.+|+||++
T Consensus 387 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 387 DTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEEC
Confidence 77889999999999999999999999999999988842 5799999999997 99999999999999999
Q ss_pred CeeeChHHHHHHHhcCCCcceEEEc
Q 012015 448 GYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 448 G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
|++|+|.|||.+|.+||.+. |+|+
T Consensus 466 G~~i~p~eIE~~l~~~~~~~-~~v~ 489 (578)
T PRK05850 466 GRNHYPDDIEATIQEITGGR-VAAI 489 (578)
T ss_pred CeecCHHHHHHHHHHhcCCc-EEEE
Confidence 99999999999999999854 6655
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-56 Score=452.25 Aligned_cols=412 Identities=27% Similarity=0.367 Sum_probs=340.2
Q ss_pred ccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecC
Q 012015 46 SLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 46 ~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 125 (473)
..++++ ||++|+++..+++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+++|++++++
T Consensus 5 ~~a~~~----p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQTT----PDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHhhC----CCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 455666 999999886558899999999999999999998 899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC----C--CeEEEEcCC-C------hhhhhcccCCCccccccccCCC
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K--HRTILIDSP-E------FDSMTMSWNSKHELDRAKVCQS 192 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~--~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
++.++.+++.++++.+++++++++........+. . ...+.++.. . +.+.... ..........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 154 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-----LPATPIADES 154 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-----CCCCCCCCcc
Confidence 9999999999999999999999987665543321 1 112222210 0 1111110 0011112334
Q ss_pred CEEEEEccCCCCCCcchhhh--cHHHHHHHH---HHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC
Q 012015 193 DVAAIMYSSGTTGRVKGVML--THRNLTAAV---ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (473)
Q Consensus 193 ~~~~i~~TSGtTG~PK~V~~--sh~~l~~~~---~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~ 267 (473)
+.++++|||||||.||+|++ +|.++.... ......+ ....++++++.+|++|.+++...+.++..|+++++.+.
T Consensus 155 ~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~ 233 (511)
T PRK13391 155 LGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEH 233 (511)
T ss_pred cccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCC
Confidence 57899999999999999995 466553322 2222333 46778999999999999998777889999999999988
Q ss_pred CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccc
Q 012015 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (473)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~ 345 (473)
+++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++++.+ +..+++.||+||+
T Consensus 234 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~ 312 (511)
T PRK13391 234 FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEG 312 (511)
T ss_pred CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccc
Confidence 999999999999999999999999998876543 2334578999999999999999999999988 7889999999999
Q ss_pred ccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCC-CeeecCc
Q 012015 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD-GWMRTGD 424 (473)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-~~~~TgD 424 (473)
+.++.... .......+++|+|+++ .++++| +++++++.|+.|||+++|+ ++.||+++++.+.+.+..+ +||+|||
T Consensus 313 ~~~~~~~~-~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD 388 (511)
T PRK13391 313 LGFTACDS-EEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGD 388 (511)
T ss_pred cceEEecC-ccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCC
Confidence 87655422 1223345799999999 689999 7899999999999999999 8889999999998887665 8999999
Q ss_pred eEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 425 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|+++++|++++.||.||++|++|.+|++.+||.+|.+||.|.+|+|++
T Consensus 389 ~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~ 437 (511)
T PRK13391 389 IGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFG 437 (511)
T ss_pred EEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 9999999999999999999999999999999999999999999999874
No 104
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.2e-58 Score=422.74 Aligned_cols=430 Identities=27% Similarity=0.319 Sum_probs=356.0
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEEC----------CCC-----------ceecHHHHHHHHHHHHHHhHHhcCCC
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLS 93 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~~g~~ 93 (473)
+.-.|+++++.+..+.+ .++.++-.- .+| ..+||.|+..++..+|++|.+ .|++
T Consensus 38 ~g~~Tl~~~~~~~~~k~----g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~-lG~k 112 (678)
T KOG1180|consen 38 PGASTLYELFEECVKKF----GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK-LGLK 112 (678)
T ss_pred CCcccHHHHHHHHHHhc----CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-hCCC
Confidence 44469999999999988 777776210 012 579999999999999999999 9999
Q ss_pred CCCE-EEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-----CCe-EEEE
Q 012015 94 KNDT-AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILI 166 (473)
Q Consensus 94 ~gd~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~ 166 (473)
++++ ++|+++.+.+|..+++||++.+..+|.+...+..+.+.+-|.+++++.++++.+.++++... ..+ +|..
T Consensus 113 ~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~ 192 (678)
T KOG1180|consen 113 PKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYF 192 (678)
T ss_pred CCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEe
Confidence 7776 99999999999999999999999999999999999999999999999999999988866521 122 3444
Q ss_pred cCC--------------------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc
Q 012015 167 DSP--------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA 226 (473)
Q Consensus 167 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~ 226 (473)
+.. +++++...+... ..++.++.++|+|+|+|||||||.||||+++|.|+++.+.....
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~-~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~ 271 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKEN-EIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGE 271 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcC-CCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcc
Confidence 421 133333333222 12344457899999999999999999999999999999999888
Q ss_pred cCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCH--------HHHHHHHHHcccceEEecHHHHHHHhcC
Q 012015 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDL--------KMMLKAVEEFRVTHAAVTPPIVVAMSKG 298 (473)
Q Consensus 227 ~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~--------~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 298 (473)
..+.+.+.|+++.++||.|++.+.+-+.++.-|+.+-..+..+. ..---.+..+|||.+.++|..+.++.+.
T Consensus 272 ~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKg 351 (678)
T KOG1180|consen 272 NVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKG 351 (678)
T ss_pred cCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHH
Confidence 88889999999999999999999888899999998877654211 1112335678999999999998877643
Q ss_pred CCCC-----------------------CCC-------------------CCCceEEEecCCCCCHHHHHHHHHhCCCCeE
Q 012015 299 GSTD-----------------------GYD-------------------LSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (473)
Q Consensus 299 ~~~~-----------------------~~~-------------------l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~ 336 (473)
...+ ... =.+||.+++||+|++++..+.+...+ .+++
T Consensus 352 Vl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv 430 (678)
T KOG1180|consen 352 VLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPV 430 (678)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccc
Confidence 2110 000 03789999999999999999999888 8899
Q ss_pred EeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCC--ccEEEEecCccccccCCCcccccccc
Q 012015 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPTIMKGYVGEPEVTSATL 414 (473)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~~~~gy~~~~~~~~~~~ 414 (473)
.++||.||+++..+. ........+.+|.|++.++++++|.+++.-...+. .|||+|+|+.+++||+++++.|++.|
T Consensus 431 ~qGYGLTEtca~~tv--~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~f 508 (678)
T KOG1180|consen 431 LQGYGLTETCAAATV--LEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDF 508 (678)
T ss_pred cccccccchhcccEe--cChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhc
Confidence 999999999887766 33344556899999999999999987765544444 79999999999999999999999999
Q ss_pred CC-CC--eeecCceEEEccCCcEEEEeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 415 LP-DG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 415 ~~-~~--~~~TgD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.. +| ||+|||+|++.+||.|.|++|++|.+|. +|+.|++.-+|++++..|.|...||.+
T Consensus 509 t~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyA 571 (678)
T KOG1180|consen 509 TVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYA 571 (678)
T ss_pred eecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEec
Confidence 88 88 9999999999999999999999999999 999999999999999999999998864
No 105
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-57 Score=462.65 Aligned_cols=421 Identities=22% Similarity=0.311 Sum_probs=338.6
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECC-C-CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSV-T-GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~-~-~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
.++.+++...++.+ |+.++ ++.. + .+.+||.||.++++++|.+|++ .|+++||+|+++++|+++++++++||
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~ 94 (579)
T PRK09192 21 PTLVEALDYAALGE----AGMNF-YDRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFAC 94 (579)
T ss_pred hhHHHHHHHhhccC----CceEE-EecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHH
Confidence 48999999998887 75544 4432 2 2679999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCC-------HHHHHHHHhhcCCeEEEEccchHHHHhcC--CCe-EEEEcCCChhhhhcccCCCcccc
Q 012015 116 LSLGVIISPANPVNT-------ESEISRQIQLSNPVIAFATSSVVHKLAKL--KHR-TILIDSPEFDSMTMSWNSKHELD 185 (473)
Q Consensus 116 ~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~ 185 (473)
+++|++++|+++..+ .+++.++++.+++++++++....+.+.+. ... .... .+..+...... ...
T Consensus 95 ~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~ 169 (579)
T PRK09192 95 QYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVL---SHAWFKALPEA--DVA 169 (579)
T ss_pred HHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccccccee---ehhhhcccCCC--ccc
Confidence 999999999987543 58999999999999999998776555432 111 1111 12222111110 111
Q ss_pred ccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc-cCCCCCCCcEEEEecChhhHHhHH-HHHHHhhhcCeEE
Q 012015 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMETAV 263 (473)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~g~~-~~l~~l~~G~~~v 263 (473)
.....++++++++|||||||.||+|.++|+++......... .+ +..++++++..+|++|.+++. .++.++..|++++
T Consensus 170 ~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~ 248 (579)
T PRK09192 170 LPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVD 248 (579)
T ss_pred cCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeE
Confidence 22345688999999999999999999999999988877666 44 688899999999999999984 5667788899887
Q ss_pred EecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC---CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCC---
Q 012015 264 VMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIMAFASKFPK--- 333 (473)
Q Consensus 264 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~--- 333 (473)
+.+. .++..+++.+.+++++.++..|..+..+..... ....+++++|.+++||+++++++.+.+.+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~ 328 (579)
T PRK09192 249 YLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGF 328 (579)
T ss_pred eeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCC
Confidence 7652 368899999999999987776665555543321 233568899999999999999999999987631
Q ss_pred --CeEEeecCCcccccccccccCCCC--------------------------CCCCCCccccCCCcEEEEEcCCCCCCCC
Q 012015 334 --VVLVQAYGLTESTAGVFRTVGPDE--------------------------CRRWGSTGRLSAGLEAKIVDPETGDSLP 385 (473)
Q Consensus 334 --~~~~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~~G~p~~~~~~~i~d~~~~~~~~ 385 (473)
..+++.||+||++..++....... .....++|+|+|+++++|+| ++++.++
T Consensus 329 ~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~ 407 (579)
T PRK09192 329 DDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLP 407 (579)
T ss_pred ChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCC
Confidence 358999999999876554221100 01124789999999999999 6788999
Q ss_pred CCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCC
Q 012015 386 PGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHRE 465 (473)
Q Consensus 386 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~ 465 (473)
.|+.|||+++|+.+++||+++ +.+.+.+..++||+|||+|++ ++|+++++||.||+||++|++|+|.|||++|.+||+
T Consensus 408 ~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~ 485 (579)
T PRK09192 408 ERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPE 485 (579)
T ss_pred CCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCC
Confidence 999999999999999999999 667777778999999999999 999999999999999999999999999999999999
Q ss_pred cc--eEEEcC
Q 012015 466 VA--DAAVIP 473 (473)
Q Consensus 466 v~--~~~vvg 473 (473)
|. +|+|++
T Consensus 486 V~~~~~~v~~ 495 (579)
T PRK09192 486 LRSGDAAAFS 495 (579)
T ss_pred ccCCcEEEEE
Confidence 98 888764
No 106
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-56 Score=452.30 Aligned_cols=420 Identities=25% Similarity=0.330 Sum_probs=343.3
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
+|+.+++.+.++++ ||++|+.+. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 3 ~~l~~~~~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~ 75 (533)
T PRK07798 3 WNIADLFEAVADAV----PDRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFK 75 (533)
T ss_pred ccHHHHHHHHHHhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC-----C-eEEEEcCC----------ChhhhhcccCCC
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----H-RTILIDSP----------EFDSMTMSWNSK 181 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~----------~~~~~~~~~~~~ 181 (473)
+|++++|+++.++.+++.++++++++++++++......+.+.. . .++.++.. .++++......
T Consensus 76 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 76 ARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-
Confidence 9999999999999999999999999999999987665554321 1 23333321 22222222111
Q ss_pred ccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--------C------CCCCCcEEEEecChhhHH
Q 012015 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--------P------KRVSPAVMLFTMPYFHIY 247 (473)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--------~------~~~~~~~~l~~~pl~~~~ 247 (473)
.... .....+.++++|||||||.||+|+++|+++..........+ . ....+++++..+|++|..
T Consensus 155 -~~~~-~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 155 -ERDF-GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred -cCCC-CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 1111 11223457899999999999999999999976554322211 0 114668999999999999
Q ss_pred hHHHHHHHhhhcCeEEEec--CCCHHHHHHHHHHcccceEEecHHHHH-HHhcCCC-CCCCCCCCceEEEecCCCCCHHH
Q 012015 248 GLFFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVV-AMSKGGS-TDGYDLSSLETVACGAAPLGKDT 323 (473)
Q Consensus 248 g~~~~l~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~-~l~~~~~-~~~~~l~~lr~v~~~G~~l~~~~ 323 (473)
++..++.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+.+... ....+++++|.+++||+++++++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 233 GQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred hHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9998999999999999998 789999999999999999999986543 3333322 33456789999999999999999
Q ss_pred HHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCcc--ccCCCcEEEEEcCCCCCCCCCCCc--cEEEEecCcc
Q 012015 324 IMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG--RLSAGLEAKIVDPETGDSLPPGKE--GELSIRGPTI 399 (473)
Q Consensus 324 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G--~p~~~~~~~i~d~~~~~~~~~g~~--Gel~v~~~~~ 399 (473)
.+++.+.+++..+++.||+||++.+...... . .....| .+.++..++|+| +++++++.|+. |+++ +++.+
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~---~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~ 386 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVA-K---GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHI 386 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCC-C---CCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCc
Confidence 9999999888999999999999765543211 1 112333 788999999999 67889999887 6665 55678
Q ss_pred ccccCCCccccccccCC---CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 400 MKGYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 400 ~~gy~~~~~~~~~~~~~---~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.||+++++.+.+.|.. ++||+|||++++|++|++++.||.||++|.+|++|++.+||.+|.++|.|.+|+|+|
T Consensus 387 ~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 463 (533)
T PRK07798 387 PLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVG 463 (533)
T ss_pred cccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEe
Confidence 99999999999887743 359999999999999999999999999999999999999999999999999999875
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.3e-56 Score=491.53 Aligned_cols=420 Identities=21% Similarity=0.282 Sum_probs=343.7
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..++.+.+.+.+++++ |++.|+.+. .++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+
T Consensus 630 ~~~~~~~l~~~~~~~~---~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~--g~~~gd~V~i~~~n~~~~~~~~la~~ 703 (1140)
T PRK06814 630 DRTLFEALIEAAKIHG---FKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK--NTPPGENVGVMLPNANGAAVTFFALQ 703 (1140)
T ss_pred cCCHHHHHHHHHHHcC---CCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH
Confidence 4678888888888872 356777653 36899999999999999999964 89999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHh------c--CCCeEEEEcCCC-----hhhhhccc-CCCc
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA------K--LKHRTILIDSPE-----FDSMTMSW-NSKH 182 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~--~~~~~~~~~~~~-----~~~~~~~~-~~~~ 182 (473)
++|++++|++++.+.+++.++++++++++++++++..+... + ...+++.++... ++...... ...+
T Consensus 704 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1140)
T PRK06814 704 SAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFP 783 (1140)
T ss_pred HCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCC
Confidence 99999999999999999999999999999999876543221 1 122333333211 00000000 0000
Q ss_pred cccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCe
Q 012015 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (473)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~ 261 (473)
....+...++++++++|||||||.||+|.++|+++..........+ ...++|++++.+|++|.+++ ..++.++..|++
T Consensus 784 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 862 (1140)
T PRK06814 784 LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVK 862 (1140)
T ss_pred ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCE
Confidence 1111134678999999999999999999999999998887776666 67889999999999999998 778899999999
Q ss_pred EEEecC-CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 262 ~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
+++.+. .+...+.+.++++++|++..+|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ +.++++.|
T Consensus 863 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 863 VFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 998864 56778899999999999999999999887753 345678999999999999999999999988 78999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCee
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 420 (473)
|+||++..+.... +.....+++|+|++++++++.+. .+ .|+.|||+++|+.++.||+++++........+|||
T Consensus 940 G~TE~~~~~~~~~--~~~~~~~~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~ 1012 (1140)
T PRK06814 940 GVTETAPVIALNT--PMHNKAGTVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWY 1012 (1140)
T ss_pred ccccccceEEecC--CCCCCCCcCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeE
Confidence 9999987765432 22334579999999999999873 22 35779999999999999998765433222358999
Q ss_pred ecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 421 ~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+++.|.+|+|++
T Consensus 1013 ~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~ 1065 (1140)
T PRK06814 1013 DTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVS 1065 (1140)
T ss_pred ecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEE
Confidence 99999999999999999999999999999999999999999999999999874
No 108
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-56 Score=478.31 Aligned_cols=414 Identities=17% Similarity=0.182 Sum_probs=325.5
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
.+++.++|.+.++++ ||++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+|+++|+++++++++||+
T Consensus 446 ~~sl~~ll~~~a~~~----pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA~~ 518 (994)
T PRK07868 446 RISLGRIIAEQARDA----PKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAALS 518 (994)
T ss_pred CccHHHHHHHHHHHC----CCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 379999999999999 999999987 7899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCC--------hhhhhcc---cCCCcccc
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE--------FDSMTMS---WNSKHELD 185 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~ 185 (473)
++|++++|++|. .++.++++.++++++|++++....+.....++++++... ....... .......+
T Consensus 519 ~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (994)
T PRK07868 519 RLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELP 595 (994)
T ss_pred hcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccCC
Confidence 999999999985 578999999999999999877766654444555543210 0000000 00000000
Q ss_pred ----ccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHH-HhhhcC
Q 012015 186 ----RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR-AAALME 260 (473)
Q Consensus 186 ----~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~-~l~~G~ 260 (473)
.....++++++|+|| ||||.||++.++|.+...........+ .+.+++++++.+|++|.+++...+. .+..|+
T Consensus 596 ~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~ 673 (994)
T PRK07868 596 GWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGS 673 (994)
T ss_pred cccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhccce
Confidence 011235789999998 577777777778776654443333444 5778999999999999999965544 455555
Q ss_pred eEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeec
Q 012015 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (473)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~y 340 (473)
++++.+.++++.+++.|+++++|+++++|+++..|++.......+++++|.++ |+.+++++.+++.+.++++.+++.|
T Consensus 674 ~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~Y 751 (994)
T PRK07868 674 RIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFF 751 (994)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeee
Confidence 56666779999999999999999999999999999886544445677899876 3449999999999999778999999
Q ss_pred CCcccccccccccCCCCCCCCCCccccCCCc-EEEEE--cC--------CCC--CCCCCCCccEEEEecCccccccCCCc
Q 012015 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIV--DP--------ETG--DSLPPGKEGELSIRGPTIMKGYVGEP 407 (473)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~--d~--------~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~ 407 (473)
|+||++..... . .....+++|+|++++ +++|. |+ ++| +.++.|+.|||+++++.. . +|
T Consensus 752 G~TE~~~~~~~-~---~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p 822 (994)
T PRK07868 752 ATTDGQAVLAN-V---SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DP 822 (994)
T ss_pred ecccccccccc-c---CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-Ch
Confidence 99998754332 1 123557999999998 66653 21 345 567889999999998753 2 34
Q ss_pred ccc--ccccC-CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 408 EVT--SATLL-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 408 ~~~--~~~~~-~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+.+ +..|. .+|||+|||+|++|+||+|+|+||+||+||++|.+|+|.|||++|.+||.|.+|+|+|
T Consensus 823 ~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg 891 (994)
T PRK07868 823 TASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYG 891 (994)
T ss_pred hhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEe
Confidence 332 22342 3799999999999999999999999999999999999999999999999999999985
No 109
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.6e-57 Score=445.21 Aligned_cols=361 Identities=18% Similarity=0.218 Sum_probs=298.8
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCC-CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
.-+.|+||.++++++|+.|++ .|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~ 96 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQI 96 (452)
T ss_pred eecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEE
Confidence 457899999999999999999 887 579999999999999999999999999999999999999999999999999999
Q ss_pred EEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhc
Q 012015 147 FATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA 226 (473)
Q Consensus 147 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~ 226 (473)
+++.+..... .. . . ........+++.++++|||||||.||+|.+||+++.........
T Consensus 97 i~~~~~~~~~---------~~-----~----~----~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~ 154 (452)
T PRK07445 97 WGLDQLKLSH---------PP-----P----L----PSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQR 154 (452)
T ss_pred EecCcccccc---------CC-----C----C----CccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHH
Confidence 9876542210 00 0 0 00011234578999999999999999999999999887776665
Q ss_pred cCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCC
Q 012015 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDL 306 (473)
Q Consensus 227 ~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 306 (473)
.+ ...+ ++.++.+|++|.+|+..++.++..|+++++.+..+.........+++++++.++|++++.+.+.. ...+
T Consensus 155 ~~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l 229 (452)
T PRK07445 155 YF-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWL 229 (452)
T ss_pred Hh-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhh
Confidence 55 3443 46788999999999988889999999999886432222234445788999999999999988632 2347
Q ss_pred CCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCC
Q 012015 307 SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPP 386 (473)
Q Consensus 307 ~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~ 386 (473)
+++|.+++||+++++++.+++.+. ++++++.||+||++..+.............++|+|+++++++|+ .
T Consensus 230 ~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~ 298 (452)
T PRK07445 230 AQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------A 298 (452)
T ss_pred hcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------C
Confidence 899999999999999999988764 78999999999997654432211112234689999999999997 3
Q ss_pred CCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCc
Q 012015 387 GKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREV 466 (473)
Q Consensus 387 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v 466 (473)
|+.|||+|+|+.++.||++++. ..++||+|||+|++|+||++++.||.||+||++|++|+|.+||++|.+||+|
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V 372 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLV 372 (452)
T ss_pred CCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCc
Confidence 5679999999999999997542 2578999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcC
Q 012015 467 ADAAVIP 473 (473)
Q Consensus 467 ~~~~vvg 473 (473)
.+|+|+|
T Consensus 373 ~~a~V~g 379 (452)
T PRK07445 373 QDVCVLG 379 (452)
T ss_pred ceEEEEe
Confidence 9999985
No 110
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.8e-56 Score=446.33 Aligned_cols=402 Identities=28% Similarity=0.381 Sum_probs=334.2
Q ss_pred cEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 012015 59 VALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQI 138 (473)
Q Consensus 59 ~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 138 (473)
.|+++. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+++|++++++++.++.+++.+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 366666 7899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEccchHHHHhcC---CCeEEEEcCC---------------------ChhhhhcccCCCccccccccCCCCE
Q 012015 139 QLSNPVIAFATSSVVHKLAKL---KHRTILIDSP---------------------EFDSMTMSWNSKHELDRAKVCQSDV 194 (473)
Q Consensus 139 ~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
+.+++++++++......+.+. ....+..... ++++.... .........+++
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 154 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ-----QEPYDGPPVPQP 154 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc-----cCccCCCCCCCc
Confidence 999999999987766544321 1122211111 01111000 001112346789
Q ss_pred EEEEccCCCCCCcchhhhcHHHH---HHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHH
Q 012015 195 AAIMYSSGTTGRVKGVMLTHRNL---TAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLK 271 (473)
Q Consensus 195 ~~i~~TSGtTG~PK~V~~sh~~l---~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~ 271 (473)
++++|||||||.||+|.++|... ..........+ +..++++++..+|++|..+....+.++..|+++++.+.+++.
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPE 233 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHH
Confidence 99999999999999999866543 33333333344 678889999999999988876667788999999998888999
Q ss_pred HHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCccccccc
Q 012015 272 MMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (473)
Q Consensus 272 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 349 (473)
.+++.++++++|.+.++|+++..+++... ....+++++|.+++||+++++++.+++.+.+ ++.+++.||+||++.++
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceE
Confidence 99999999999999999999999887543 2344678999999999999999999999988 78899999999999866
Q ss_pred ccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCcccc-ccCCCccccccccCCCCeeecCceEEE
Q 012015 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK-GYVGEPEVTSATLLPDGWMRTGDLCYI 428 (473)
Q Consensus 350 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~TgD~~~~ 428 (473)
+... .......+++|.|+++++++++| +++++++.|+.|||+++++.++. ||+++++.+.+.+ .++||+|||++++
T Consensus 313 ~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~ 389 (509)
T PRK12406 313 FATS-EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYL 389 (509)
T ss_pred ecCc-ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEE
Confidence 5422 12223457899999999999999 67899999999999999998875 9999998887665 7899999999999
Q ss_pred ccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 429 ~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++||++++.||.||+||++|.+|++.+||.+|.++|+|.+|+|++
T Consensus 390 ~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 434 (509)
T PRK12406 390 DADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFG 434 (509)
T ss_pred cCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999999999999999999999874
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-56 Score=447.36 Aligned_cols=397 Identities=30% Similarity=0.418 Sum_probs=333.6
Q ss_pred CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 012015 66 TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 66 ~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (473)
.++.+||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 48999999999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccchHHHHhcC------CCeEEEEcCC------ChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhc
Q 012015 146 AFATSSVVHKLAKL------KHRTILIDSP------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLT 213 (473)
Q Consensus 146 ii~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~s 213 (473)
++++........+. ..+.+.+... .+++..... ........++.++++|||||||.||+|.++
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~ 161 (502)
T PRK08276 87 LIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQ-----PDTPIADETAGADMLYSSGTTGRPKGIKRP 161 (502)
T ss_pred EEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcC-----CCCCCCCCCcceEEEECCCCCCCCceEEEc
Confidence 99988766554321 2222222211 122221110 111123456789999999999999999988
Q ss_pred HHHHHHHH------HHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEe
Q 012015 214 HRNLTAAV------ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 214 h~~l~~~~------~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~ 287 (473)
|.++.... ....... ....++++++.+|++|..++...+.++..|+++++.+.+++..+++.++++++|++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 240 (502)
T PRK08276 162 LPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQL 240 (502)
T ss_pred cCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEe
Confidence 87654322 1111122 2346789999999999999877778999999999998899999999999999999999
Q ss_pred cHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCcc
Q 012015 288 TPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG 365 (473)
Q Consensus 288 ~P~~~~~l~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G 365 (473)
+|+++..+++... ....+++++|.+++||++++.++.+++.+.+ +..+++.||+||++.+++.... ......+++|
T Consensus 241 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~~G 318 (502)
T PRK08276 241 VPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSE-DWLAHPGSVG 318 (502)
T ss_pred hHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCc-cccccCCCcc
Confidence 9999999987653 2345688999999999999999999999988 7889999999999886654321 2233457899
Q ss_pred ccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEE
Q 012015 366 RLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIK 445 (473)
Q Consensus 366 ~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~ 445 (473)
+|+ +++++++| +++.+++.|+.|||+++|+.++.||+++++.+.+.+.+++||+|||+++++++|.+++.||.||++|
T Consensus 319 ~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~ 396 (502)
T PRK08276 319 KAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMII 396 (502)
T ss_pred eec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEE
Confidence 999 88999999 6788999999999999999999999999999999998789999999999999999999999999999
Q ss_pred EcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 446 YKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 446 ~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
++|.+|++.+||.+|.++|+|.+|+|++
T Consensus 397 ~~G~~v~~~~iE~~i~~~~~v~~~~v~~ 424 (502)
T PRK08276 397 SGGVNIYPQEIENLLVTHPKVADVAVFG 424 (502)
T ss_pred eCCEEeCHHHHHHHHHhCCCcceEEEEe
Confidence 9999999999999999999999999874
No 112
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.7e-56 Score=441.36 Aligned_cols=383 Identities=21% Similarity=0.282 Sum_probs=322.7
Q ss_pred CHHHHhccc-ccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 39 SAVDYVSSL-RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 39 ~l~~~~~~~-~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
++.+..... ++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 3 ~~~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~ 75 (458)
T PRK09029 3 IFSDWPWRHWAQVR----PQAIALRLN--DEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQ 75 (458)
T ss_pred hhhcChHHHHHHhC----CCceeeecC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 444444333 5666 999999987 8899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 197 (473)
+|++++|+++..+.+++..+++++++++++++++... .... ... ... .. . ........+++++++
T Consensus 76 ~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~--~~~-----~~~-----~~-~-~~~~~~~~~~~~a~i 140 (458)
T PRK09029 76 CGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL--TSL-----HLQ-----LV-E-GAHAVAWQPQRLATM 140 (458)
T ss_pred cCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc--ccc-----ccc-----cc-c-ccCcccCCCCCeEEE
Confidence 9999999999999999999999999999998876432 1110 000 000 00 0 111223456889999
Q ss_pred EccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHH
Q 012015 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (473)
Q Consensus 198 ~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i 277 (473)
+|||||||.||+|.++|++++.........+ ...++++++..+|++|.+++..++.++..|+++++.+. ..+++.+
T Consensus 141 ~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i 216 (458)
T PRK09029 141 TLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-PFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQAL 216 (458)
T ss_pred EECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-CCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHH
Confidence 9999999999999999999999888777766 67888999999999999998777888999999998764 4566666
Q ss_pred HHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC
Q 012015 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (473)
Q Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 357 (473)
.++|.+..+|+++..+...... ..++|.+++||+++++.+.+++.+. +.++++.||+||++........
T Consensus 217 --~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~--- 285 (458)
T PRK09029 217 --AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA--- 285 (458)
T ss_pred --hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC---
Confidence 3789999999999988876432 3479999999999999999998865 8899999999999865443211
Q ss_pred CCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEE
Q 012015 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (473)
Q Consensus 358 ~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~ 437 (473)
....++|+|+++++++|++ |||+++|+.++.||+++++.+.... .+|||+|||+|++| ||++++.
T Consensus 286 -~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~ 350 (458)
T PRK09029 286 -DGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTIL 350 (458)
T ss_pred -CCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEe
Confidence 1235799999999999987 8999999999999999998876543 67999999999999 9999999
Q ss_pred eccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 438 DRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 438 GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||.||+||++|.+|+|.+||++|.++|+|.||+|+|
T Consensus 351 gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~ 386 (458)
T PRK09029 351 GRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVP 386 (458)
T ss_pred cccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEc
Confidence 999999999999999999999999999999999985
No 113
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-56 Score=429.83 Aligned_cols=433 Identities=23% Similarity=0.282 Sum_probs=356.0
Q ss_pred CCCCCHHHHhcccccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHH
Q 012015 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (473)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~ 110 (473)
...+|..+.+.++..... .++.+|+++... ...+||.|+.+++.++|..|.+ +|+++||+|++++|+.+++++
T Consensus 60 g~~ln~~~n~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~mPm~~e~~i 136 (626)
T KOG1175|consen 60 GAFLNACYNCLDRHIKEK--GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYMPMIPEAVI 136 (626)
T ss_pred cchhhhhHhhhhhhhhhc--CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEeccCChHHHH
Confidence 555788877776654332 277788776421 2458999999999999999996 999999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-------------C------CeEEEEc----
Q 012015 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------------K------HRTILID---- 167 (473)
Q Consensus 111 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------------~------~~~~~~~---- 167 (473)
+.+||.++|++.+++...+++..+..++++++++++++.+........+ . ...+.+.
T Consensus 137 a~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 216 (626)
T KOG1175|consen 137 AMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNR 216 (626)
T ss_pred HHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccc
Confidence 9999999999999999999999999999999999999976543322110 0 0111111
Q ss_pred CCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHH
Q 012015 168 SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (473)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 247 (473)
+..++..+..... .........+++.+|+|||||||.||++.+++....-.............+.|+.++.....|+.
T Consensus 217 d~~~~~~~~~a~~--~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~ 294 (626)
T KOG1175|consen 217 DLFWSLELKKASP--EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWIT 294 (626)
T ss_pred cccHHHHhhhcCC--CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeee
Confidence 1123333222221 22355667789999999999999999999998866555544444444899999999999999999
Q ss_pred hH-HHHHHHhhhcCeEEEec--CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHH
Q 012015 248 GL-FFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKD 322 (473)
Q Consensus 248 g~-~~~l~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~ 322 (473)
+. +..+.+|..|+++++.+ ++++..+++.+.++++|.++..|+.++.|.+.... ..+++++||.+.++||++.++
T Consensus 295 g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~ 374 (626)
T KOG1175|consen 295 GHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPE 374 (626)
T ss_pred ccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcc
Confidence 98 56778999999999985 46999999999999999999999999988776553 344557899999999999999
Q ss_pred HHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCC-CccEEEEecC---c
Q 012015 323 TIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-KEGELSIRGP---T 398 (473)
Q Consensus 323 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g-~~Gel~v~~~---~ 398 (473)
.++++.+.+...+|.+.||+||+|+.++..........+++.+.|.+++.+.|+| ++|+.++.+ +.|+|+++.+ +
T Consensus 375 ~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~ 453 (626)
T KOG1175|consen 375 AWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPG 453 (626)
T ss_pred hHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCcc
Confidence 9999999993336999999999999988754333256789999999999999999 689988886 8899999983 7
Q ss_pred cccccCCCccccccccCC--CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 399 IMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.+++|++|++..+..+.. .|+|.|||.+++|+||+++++||.||+|+++|+|+++.|||+++.+||.|.||+|||
T Consensus 454 ~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg 530 (626)
T KOG1175|consen 454 MFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVG 530 (626)
T ss_pred ccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeec
Confidence 789999999966555545 789999999999999999999999999999999999999999999999999999997
No 114
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9.2e-56 Score=442.98 Aligned_cols=368 Identities=18% Similarity=0.222 Sum_probs=289.2
Q ss_pred eCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch---------HHHHhc-CCCeEEEEcC---
Q 012015 102 STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKLAK-LKHRTILIDS--- 168 (473)
Q Consensus 102 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~-~~~~~~~~~~--- 168 (473)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.. .....+++..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999997642 111111 1112222210
Q ss_pred ----------CChhhhhcccCC-----CccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCC
Q 012015 169 ----------PEFDSMTMSWNS-----KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (473)
Q Consensus 169 ----------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~ 233 (473)
..+.++...... ..........++++++|+|||||||.||||++||++++.........+ ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM-DIQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc-CCCC
Confidence 123332211000 000111122458899999999999999999999999887665444444 5778
Q ss_pred CcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC-CCHHHHHHHHHHcccceEEecHHHHHHHhcCCC--CCCCCCCCce
Q 012015 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLE 310 (473)
Q Consensus 234 ~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr 310 (473)
++++++.+|++|.+++..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++... ....++++||
T Consensus 160 ~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr 239 (499)
T PLN03051 160 GDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLR 239 (499)
T ss_pred CCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhhe
Confidence 8999999999999998778889999999999874 788999999999999999999999999887643 3345688999
Q ss_pred EEEecCCCCCHHHHHHHHHhCC-CCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCC--
Q 012015 311 TVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-- 387 (473)
Q Consensus 311 ~v~~~G~~l~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g-- 387 (473)
.+++||+++++++.+++++.++ +..+++.||+||++..+..... ......+++|+|.++++++|+| +++++++.|
T Consensus 240 ~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~ 317 (499)
T PLN03051 240 VFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL-LQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQP 317 (499)
T ss_pred EEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc-cCCCCCccccCCCCCceEEEEC-CCCCCCCCCCC
Confidence 9999999999999987777431 4789999999998754332111 1223457899999999999999 788999988
Q ss_pred CccEEEEecCcc--ccccCCCccccccccCC--------CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHH
Q 012015 388 KEGELSIRGPTI--MKGYVGEPEVTSATLLP--------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELE 457 (473)
Q Consensus 388 ~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE 457 (473)
+.|||+++|+.+ +.||++++ .+...++. .+||+|||+|++|+||+|+++||.||+||++|++|+|.|||
T Consensus 318 ~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE 396 (499)
T PLN03051 318 CVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIE 396 (499)
T ss_pred cceEEEEecCcCCCCccccCCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHH
Confidence 479999999976 57999765 33322211 12799999999999999999999999999999999999999
Q ss_pred HHHhc-CCCcceEEEcC
Q 012015 458 HLLLS-HREVADAAVIP 473 (473)
Q Consensus 458 ~~l~~-~~~v~~~~vvg 473 (473)
++|.+ ||.|.+|+|||
T Consensus 397 ~~l~~~~p~V~~aavvg 413 (499)
T PLN03051 397 RACDRAVAGIAETAAVG 413 (499)
T ss_pred HHHHhcCCCcceEEEEE
Confidence 99986 99999999985
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-55 Score=445.15 Aligned_cols=417 Identities=23% Similarity=0.334 Sum_probs=337.1
Q ss_pred CHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHh
Q 012015 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (473)
Q Consensus 39 ~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 118 (473)
++.+.+...+..+ |+.+++.+...++.+||.||+++++++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~ 77 (545)
T PRK07768 3 RFTEKMYANARTS----PRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMR 77 (545)
T ss_pred hHHHHHHHHhhCC----CcceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHc
Confidence 5788888888888 999999887667899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHH-------HHHHhhcCCeEEEEccchHHHHhcC---CCeEEEEcCCChhhhhcccCCCccccccc
Q 012015 119 GVIISPANPVNTESEI-------SRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAK 188 (473)
Q Consensus 119 G~~~v~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (473)
|++++++++..+.+++ ..+++.++++.+++++......... ....+ .++++..... .....
T Consensus 78 g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~----~~~~~ 148 (545)
T PRK07768 78 GASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVL-----TVADLLAADP----IDPVE 148 (545)
T ss_pred CccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCcee-----ehhhhcccCC----CCcCC
Confidence 9999999988776444 4567778999999987654433221 11221 2223322111 12233
Q ss_pred cCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCC-cEEEEecChhhHHhHH-HHHHHhhhcCeEEEec
Q 012015 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSP-AVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQ 266 (473)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~-~~~l~~~pl~~~~g~~-~~l~~l~~G~~~v~~~ 266 (473)
..++++++++|||||||.||+|.++|+++........... +.... +++++.+|++|..++. .++.++..|+++++..
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-EFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-CCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 4578999999999999999999999999988877666665 45554 8999999999999984 4667899999988876
Q ss_pred C----CCHHHHHHHHHHcccceEEecHHHHHHHhcCC----CCCCCCCCCceEEEecCCCCCHHHHHHHHHh---C--CC
Q 012015 267 R----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG----STDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PK 333 (473)
Q Consensus 267 ~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~---~--~~ 333 (473)
+ .++..+.+.+++++++++..+|..+..+.... .....+++++|.++++|+++++++.+++.+. + +.
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 4 26788999999999999888887776665432 1224668899999999999999999999874 3 22
Q ss_pred CeEEeecCCcccccccccccCCC------------------------CCCCCCCccccCCCcEEEEEcCCCCCCCCCCCc
Q 012015 334 VVLVQAYGLTESTAGVFRTVGPD------------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (473)
Q Consensus 334 ~~~~~~yG~tE~~~~~~~~~~~~------------------------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~ 389 (473)
..+++.||+||++..+....... ......++|+|+++++++++| ++++++++|+.
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~ 386 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGV 386 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCE
Confidence 35999999999987654322110 011235799999999999999 77899999999
Q ss_pred cEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceE
Q 012015 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (473)
Q Consensus 390 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (473)
|||+++|+.+++||++.+.... .+..+|||+|||+++++++|+++++||.||+||++|.+|++.+||.+|.++|+|.++
T Consensus 387 Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~ 465 (545)
T PRK07768 387 GVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPG 465 (545)
T ss_pred EEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccc
Confidence 9999999999999998654443 344678999999999999999999999999999999999999999999999999997
Q ss_pred EEc
Q 012015 470 AVI 472 (473)
Q Consensus 470 ~vv 472 (473)
+|+
T Consensus 466 ~vv 468 (545)
T PRK07768 466 NAV 468 (545)
T ss_pred eEE
Confidence 765
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3e-54 Score=426.32 Aligned_cols=375 Identities=26% Similarity=0.394 Sum_probs=316.0
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+..++++++++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCC
Q 012015 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (473)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~ 230 (473)
...... + ....+..+....... .........+++++++|||||||.||+|.++|+++..........+ +
T Consensus 80 ~~~~~~-------~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~ 148 (436)
T TIGR01923 80 LLEEKD-------F--QADSLDRIEAAGRYE-TSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL-G 148 (436)
T ss_pred cccccc-------e--eecchHhhhhccccc-ccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc-C
Confidence 642111 0 000111111111100 1112234567899999999999999999999999998888777776 7
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCce
Q 012015 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (473)
Q Consensus 231 ~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 310 (473)
..+++++++.+|++|.+++..++.++..|+++++.+.++ .+++.++++++|++.++|+++..+++..... +++|
T Consensus 149 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~l~ 222 (436)
T TIGR01923 149 FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN----ENLR 222 (436)
T ss_pred CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----CceE
Confidence 888999999999999999988899999999999987653 8999999999999999999999998865422 6899
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCcc
Q 012015 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (473)
Q Consensus 311 ~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~G 390 (473)
.++++|+++++++.+.+++. +..+++.||+||++..+......... ...++|+|++++++++.+.+. ++.|
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~i~~~~~------~~~G 293 (436)
T TIGR01923 223 KILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLH-ARPDVGRPLAGREIKIKVDNK------EGHG 293 (436)
T ss_pred EEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccc-cccCCCccCCCcEEEEEeCCC------CCce
Confidence 99999999999999988775 89999999999998765543222222 223599999999999844122 2679
Q ss_pred EEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEE
Q 012015 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (473)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (473)
||+++|+.++.||+++++.+...+ .++||+|||++++++||++++.||.||++|++|.+|++.+||++|.++|.|.+|+
T Consensus 294 el~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 372 (436)
T TIGR01923 294 EIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAV 372 (436)
T ss_pred EEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEE
Confidence 999999999999999888876655 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcC
Q 012015 471 VIP 473 (473)
Q Consensus 471 vvg 473 (473)
|++
T Consensus 373 v~~ 375 (436)
T TIGR01923 373 VVP 375 (436)
T ss_pred EeC
Confidence 975
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-52 Score=411.48 Aligned_cols=344 Identities=19% Similarity=0.206 Sum_probs=298.2
Q ss_pred EEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhh
Q 012015 61 LINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL 140 (473)
Q Consensus 61 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 140 (473)
+++. ++++||+||.++++++|+.|. .++++|++|+++++|+++++++++|++++|++++|+++..+.+++..++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~--~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~ 77 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ--FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKR 77 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHh
Confidence 4556 789999999999999999985 589999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHH
Q 012015 141 SNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA 220 (473)
Q Consensus 141 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~ 220 (473)
+++++++++..... .. . .....++++++++|||||||.||+|.++|+++...
T Consensus 78 ~~~~~~i~~~~~~~-----------~~---------------~--~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~ 129 (414)
T PRK08308 78 AGCHGLLYGESDFT-----------KL---------------E--AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDRE 129 (414)
T ss_pred CCCCEEEecCcccc-----------cc---------------c--CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHH
Confidence 99999998763110 00 0 01134578999999999999999999999999988
Q ss_pred HHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCC
Q 012015 221 VASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG 299 (473)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 299 (473)
.......+ ....+++.+..+|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|.++++|+++..+.+..
T Consensus 130 ~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~ 208 (414)
T PRK08308 130 IEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLL 208 (414)
T ss_pred HHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcC
Confidence 87766666 56788999999999999998 66889999999999998899999999999999999999999999998764
Q ss_pred CCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCC
Q 012015 300 STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPE 379 (473)
Q Consensus 300 ~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 379 (473)
... .+++.++++|+++++++.+++++. ..++++.||+||++.+... ......+++|+|++++++++.+ +
T Consensus 209 ~~~----~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~----~~~~~~~~~G~p~~~~~~~~~~-~ 277 (414)
T PRK08308 209 PGT----FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSIC----PDMKSHLDLGNPLPHVSVSAGS-D 277 (414)
T ss_pred Ccc----ccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeec----CCCCCCCccCccCCCeEEEEec-C
Confidence 321 368899999999999999999987 5689999999999864432 1123456899999999999876 2
Q ss_pred CCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHH
Q 012015 380 TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHL 459 (473)
Q Consensus 380 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~ 459 (473)
.++.|||++++ .++||+|||+|++++||+++++||.||+||++|++|+|.+||.+
T Consensus 278 ------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~ 332 (414)
T PRK08308 278 ------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDV 332 (414)
T ss_pred ------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHH
Confidence 35579999974 25799999999999999999999999999999999999999999
Q ss_pred HhcCCCcceEEEcC
Q 012015 460 LLSHREVADAAVIP 473 (473)
Q Consensus 460 l~~~~~v~~~~vvg 473 (473)
|.++|+|.+|+|++
T Consensus 333 l~~~~~v~~a~v~~ 346 (414)
T PRK08308 333 MLRLPGVQEAVVYR 346 (414)
T ss_pred HHhCCCeeEEEEEe
Confidence 99999999999874
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-52 Score=387.51 Aligned_cols=424 Identities=23% Similarity=0.297 Sum_probs=348.3
Q ss_pred CCCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHH
Q 012015 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (473)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 116 (473)
..|+.+.+.++++++ |+++|+++.++.+.+||+|+.++++++|+.|.. .|++.||+|+++|+|.++++..+||++
T Consensus 76 ~~ti~~~F~~~vrr~----p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLa 150 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQ----PDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLA 150 (649)
T ss_pred CCcHHHHHHHHHHhC----CCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHH
Confidence 379999999999999 999999998667899999999999999999999 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC-------CCeEEEEcC----CChhhhhcccCCCcc--
Q 012015 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHRTILIDS----PEFDSMTMSWNSKHE-- 183 (473)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~~~~~~~-- 183 (473)
++|++...||++...+.+.|.++.++++++|++++....+.+. .+.....+. ...+++....+....
T Consensus 151 KlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~ 230 (649)
T KOG1179|consen 151 KLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHP 230 (649)
T ss_pred hhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCC
Confidence 9999999999999999999999999999999999988776654 122222221 123333322221111
Q ss_pred ---ccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhc
Q 012015 184 ---LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (473)
Q Consensus 184 ---~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G 259 (473)
......+-.++++.+|||||||.||+.+++|.............+ +...+|+++..+|++|..+. ..+..++..|
T Consensus 231 vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~G 309 (649)
T KOG1179|consen 231 VPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-GMTADDVVYTTLPLYHSAAGILGIGGCLLHG 309 (649)
T ss_pred CCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEcchhHHHHHHHHHHHHHHhcC
Confidence 112233456789999999999999999999999988887677777 89999999999999998887 8899999999
Q ss_pred CeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEee
Q 012015 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (473)
Q Consensus 260 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~ 339 (473)
+|+++-++|+...+|+.+.+|++|++...--+++-|++.+.....+-..+|..+ |..+.+++++.|.+.|+..++.+.
T Consensus 310 aT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~ 387 (649)
T KOG1179|consen 310 ATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEF 387 (649)
T ss_pred ceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999999999999876666566777776 777999999999999966779999
Q ss_pred cCCcccccccccccCCCCCCCCCCccc------cCCCcEEEEEcCCCCC----------CCCCCCccEEEEe--cCcc--
Q 012015 340 YGLTESTAGVFRTVGPDECRRWGSTGR------LSAGLEAKIVDPETGD----------SLPPGKEGELSIR--GPTI-- 399 (473)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~------p~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~--~~~~-- 399 (473)
||+||......+... ..+.+|+ -+--+++.-.|+++++ +|++|+.|.+.-+ ....
T Consensus 388 YgaTEgn~~~~N~d~-----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~ 462 (649)
T KOG1179|consen 388 YGATEGNSNLVNYDG-----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLR 462 (649)
T ss_pred eccccCcceeeeecC-----ccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchh
Confidence 999998765544221 1222222 2222333334556664 5678999966432 2333
Q ss_pred -ccccCCCccccccccCC------CCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEc
Q 012015 400 -MKGYVGEPEVTSATLLP------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 400 -~~gy~~~~~~~~~~~~~------~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
+.||.+.++.+.+.... |-||.|||+-.+|+.|++||.+|..|.+..+|++|+..|+|++|..+..++||.|.
T Consensus 463 ~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VY 542 (649)
T KOG1179|consen 463 SFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVY 542 (649)
T ss_pred hhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEE
Confidence 78999988777765432 44999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q 012015 473 P 473 (473)
Q Consensus 473 g 473 (473)
|
T Consensus 543 G 543 (649)
T KOG1179|consen 543 G 543 (649)
T ss_pred E
Confidence 6
No 119
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-45 Score=380.23 Aligned_cols=410 Identities=22% Similarity=0.273 Sum_probs=344.8
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 117 (473)
.++.+.|.+.++.. |++.|+.+. +..+||+++..+++++|+.|.+ .|+++++.|+++++++.+++++++|+++
T Consensus 227 ~~i~~~f~~~a~~~----p~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilk 299 (642)
T COG1020 227 LTIHLLFEEQAATT----PDAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLK 299 (642)
T ss_pred chHHHHHHHHHHhC----CCceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999988 8999999999999999999998 8999999999999889999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEE
Q 012015 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (473)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 197 (473)
+|+.++|++|.++.+++.++++.++++.+++............. +.++..... .... ........+++.+|+
T Consensus 300 aG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~-~~~~~~~~~~~~ayi 371 (642)
T COG1020 300 AGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDALSE-----IPDT-DPIPQALLGDALAYI 371 (642)
T ss_pred cCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccccccc-----CCcc-CcccccCCCCCeEEE
Confidence 99999999999999999999999999999998433221111111 111111110 0000 111123345889999
Q ss_pred EccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC---CCHHHHH
Q 012015 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (473)
Q Consensus 198 ~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~---~~~~~~~ 274 (473)
+|||||||.||||..+|+++.....+....+ .....++++...++.+..+...++.++..|+++++.+. .++..+.
T Consensus 372 iytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~ 450 (642)
T COG1020 372 IYTSGSTGQPKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALL 450 (642)
T ss_pred EEccCCCCCCCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHH
Confidence 9999999999999999999998777766666 78888899999999888888999999999999999874 5899999
Q ss_pred HHHHHcccceEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCC-CCeEEeecCCccccccccc
Q 012015 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFR 351 (473)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~ 351 (473)
+.+.++++|.+..+|.++..+...... .......+|.+++||+.++.++.+++....+ ...+.+.||.||+......
T Consensus 451 ~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~ 530 (642)
T COG1020 451 ELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPS 530 (642)
T ss_pred HHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheee
Confidence 999999999999999999999876221 1222345999999999999999999988764 4689999999996655544
Q ss_pred ccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccC
Q 012015 352 TVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDED 431 (473)
Q Consensus 352 ~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~ 431 (473)
...........++|+|++|.+++|+| +.+++++.|..||+++.|.++.+||+++|+.|.+.|..+.+|+|||++++..|
T Consensus 531 ~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~d 609 (642)
T COG1020 531 FPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLAD 609 (642)
T ss_pred EEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCC
Confidence 33222222246899999999999999 88999999999999999999999999999999999976568999999999999
Q ss_pred CcEEEEeccCCeEEEcCeeeChHHHHHHHhcCC
Q 012015 432 GFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHR 464 (473)
Q Consensus 432 g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~ 464 (473)
|.+.++||.|+++|++|++|.+.|||..+.++|
T Consensus 610 g~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 610 GALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 999999999999999999999999999998875
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.9e-45 Score=390.82 Aligned_cols=398 Identities=16% Similarity=0.132 Sum_probs=304.7
Q ss_pred CCCCCCCCCHHHHhcccccCCCCCCCCCcEEEEC---CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc
Q 012015 31 LPPEDAPISAVDYVSSLRATLPWRDDDTVALINS---VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (473)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~ 107 (473)
+|.+....|+.+++.+.++++ |+++|+... +..+++||+|+.++++++|.+|.+ +|+++||+|+|+++|+++
T Consensus 420 ~~~~~~~~Tl~dll~~~a~~~----pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~E 494 (1452)
T PTZ00297 420 YNPLAGVRSLGEMWERSVTRH----STFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRN 494 (1452)
T ss_pred CCCcccCCCHHHHHHHHHHHC----CCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHH
Confidence 333344469999999999999 999999642 223689999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcC---CC-eEEEEcCC--------------
Q 012015 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KH-RTILIDSP-------------- 169 (473)
Q Consensus 108 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~-~~~~~~~~-------------- 169 (473)
|+++.+||+++|+++||+.+ +.+++.+++++++++++|++.+....+.+. .. .+++++..
T Consensus 495 wvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i 572 (1452)
T PTZ00297 495 IVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNI 572 (1452)
T ss_pred HHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCc
Confidence 99999999999999999975 467899999999999999998877766543 22 24444321
Q ss_pred ---ChhhhhcccCCCccccccccCCCCEEEEEc---cCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEec
Q 012015 170 ---EFDSMTMSWNSKHELDRAKVCQSDVAAIMY---SSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTM 241 (473)
Q Consensus 170 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~ 241 (473)
.++++...+............+++++.++| ||||||.||||++||+|++..+....... ....+++++++.+
T Consensus 573 ~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 573 TLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFT 652 (1452)
T ss_pred ceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEec
Confidence 134444332211111122335678888885 99999999999999999999888765421 2345789999999
Q ss_pred ChhhHHhHHHHHHHhhhcCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCC-------------------
Q 012015 242 PYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD------------------- 302 (473)
Q Consensus 242 pl~~~~g~~~~l~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------- 302 (473)
|++|+++....+.++..|+++.. +++..+++.|++++||+++++|++++++.......
T Consensus 653 PLaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k 729 (1452)
T PTZ00297 653 PFAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLR 729 (1452)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999998777888999999864 47899999999999999999999999776432110
Q ss_pred -----CCCC------------------CCceEEEecCC--CCCHHHHHHHHHhCCCCeEEeecCCcccccccccccCCCC
Q 012015 303 -----GYDL------------------SSLETVACGAA--PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (473)
Q Consensus 303 -----~~~l------------------~~lr~v~~~G~--~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 357 (473)
.... .++|.+++||. +++..+. . ++++...||.||+. +.+.. .
T Consensus 730 ~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~---~~~~~--~ 797 (1452)
T PTZ00297 730 SRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVF---FLPSE--G 797 (1452)
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEee---eecCC--C
Confidence 0000 36888888873 5543332 2 56788899999953 22111 1
Q ss_pred CCCCCCccccCCCcEEEEEcC-CCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEccCCcEEE
Q 012015 358 CRRWGSTGRLSAGLEAKIVDP-ETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (473)
Q Consensus 358 ~~~~~~~G~p~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~l~~ 436 (473)
.. ...|.|+|+++++|.+. +.+. .+..|||++++ .++|+.|.+.+ +||+ +||+|+|
T Consensus 798 ~~--~~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr~-------~kdpe~T~e~~--~gW~---------~dG~L~I 854 (1452)
T PTZ00297 798 VF--CVDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLAK-------KGEPRRTLPIA--AQWK---------RDRTLRL 854 (1452)
T ss_pred Cc--ccCCeecCceEEEEcccccccC---CCCCCeEEEEE-------CCChHHHHHhh--CcCc---------cCCeEEE
Confidence 11 23499999999999873 2222 12369999963 47898888743 5664 6999999
Q ss_pred EeccCCeEEE-cCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 437 VDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 437 ~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
+||++|+||. +|++|.|..||.++..+|.|.+++|+|
T Consensus 855 idRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~G 892 (1452)
T PTZ00297 855 LGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYA 892 (1452)
T ss_pred EeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEe
Confidence 9999999999 999999999999999999999999987
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.3e-40 Score=314.58 Aligned_cols=253 Identities=30% Similarity=0.469 Sum_probs=217.4
Q ss_pred ccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEe--
Q 012015 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-- 265 (473)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~-- 265 (473)
...++++++++|||||||.||+|.++|+++..........+ ...++++..+|++|.+++..++.++..|+++++.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 34468899999999999999999999999988877655543 3457889999999999998888899999998873
Q ss_pred -cCCCHHHHHHHHHHcc--cceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCC
Q 012015 266 -QRFDLKMMLKAVEEFR--VTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (473)
Q Consensus 266 -~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~ 342 (473)
..+++..+++.+++++ .++...+|..+..++.... ....++++|.+++||+++++++.+++.+. ++++++.||+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~ 184 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGM 184 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccC
Confidence 4578999999999998 5666778888877766543 23457899999999999999999998864 8999999999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeec
Q 012015 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (473)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 422 (473)
||++..+. ..|.|++++++++.+ |||+++|+.++.||+++++.+ .|..+|||+|
T Consensus 185 TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~T 238 (358)
T PRK07824 185 SETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRT 238 (358)
T ss_pred CccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCceec
Confidence 99875432 358899999999844 999999999999999988754 3556789999
Q ss_pred CceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEcC
Q 012015 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 423 gD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
||+|++ ++|++++.||.||+||++|++|+|.+||.+|.++|+|.+|+|+|
T Consensus 239 GDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~ 288 (358)
T PRK07824 239 DDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFG 288 (358)
T ss_pred ccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 999999 89999999999999999999999999999999999999999985
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=5.6e-34 Score=272.25 Aligned_cols=232 Identities=21% Similarity=0.214 Sum_probs=187.3
Q ss_pred CCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCC--CCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEecCC
Q 012015 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKR--VSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (473)
Q Consensus 192 ~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~--~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~~~ 268 (473)
+..++++|||||||.||+|.++|+++..........+ +. ...+++++.+|++|.+++ +.++.++..|+++++.+.+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 5588999999999999999999999988777665554 33 334689999999999887 6678899999999999888
Q ss_pred CHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccc
Q 012015 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (473)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 348 (473)
++..+++.++.. |++.++|++++.+.+.. .+++++|. ++||+++++++.+++++. +...+++.||+||++++
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 888888888653 89999999999997653 34677775 678999999999999886 23479999999999875
Q ss_pred cccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEE
Q 012015 349 VFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI 428 (473)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~ 428 (473)
++.. .....|+|+|++++.+ + ++.. .| ...|++|||++++
T Consensus 246 ~~~~-------~~~~~~~~~p~~~~~~-~--~~~~-----------~g-------------------~~~~~~tgD~g~~ 285 (386)
T TIGR02372 246 GLRE-------APDDPFRLLPDLACFA-D--TLSS-----------AG-------------------LARRLDLQDRLAW 285 (386)
T ss_pred cccc-------CCCCCcccCCCccccC-C--CccC-----------CC-------------------ccceeecCceEEE
Confidence 5431 1124567788776543 1 1110 01 1236899999999
Q ss_pred ccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcceEEEc
Q 012015 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (473)
Q Consensus 429 ~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (473)
|++|+|+++||+||+||++|++|+|.+||++|.+||+|.+|+|+
T Consensus 286 d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~ 329 (386)
T TIGR02372 286 DKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVR 329 (386)
T ss_pred cCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEE
Confidence 99999999999999999999999999999999999999999875
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.4e-33 Score=276.46 Aligned_cols=258 Identities=24% Similarity=0.292 Sum_probs=201.6
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHh---hccCCCCCCCcEEEEecChhhHH-hHHHHHHHhhhcCeEEEe
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS---FASSPKRVSPAVMLFTMPYFHIY-GLFFCFRAAALMETAVVM 265 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~-g~~~~l~~l~~G~~~v~~ 265 (473)
..++.+++++||||||.||++.++|+++..+.... .... +..++|++++..+..+.. ++...+.+...|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 34578889999999999999999999987654332 2223 677888888766544322 233455677889999888
Q ss_pred cCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCC--CCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCc
Q 012015 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYD--LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (473)
Q Consensus 266 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~--l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~t 343 (473)
...+++.+++.|+++++|+++++|+.+..|++.....+.+ ..++|.+++|||++++++.+.+.+.| ++++++.||+|
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 7777899999999999999999999999888754433322 35899999999999999999999998 78999999999
Q ss_pred ccccccccccCCCCCCCCCCccccC--CCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeee
Q 012015 344 ESTAGVFRTVGPDECRRWGSTGRLS--AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (473)
Q Consensus 344 E~~~~~~~~~~~~~~~~~~~~G~p~--~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (473)
|+++........ . . ..|.++ +++.++|+|+++++++++|+.|||++++. +.+.+ +.+||+
T Consensus 231 E~~~~~~~~~~~-~-~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~------------~~~~~-p~~ry~ 292 (422)
T TIGR02155 231 EVIGPGVAMECV-E-T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL------------TKEAL-PVIRYR 292 (422)
T ss_pred hhcCCceeeccc-c-c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC------------Ccccc-ceeeEE
Confidence 985321111110 0 1 112233 35678899977899999999999999863 22333 567999
Q ss_pred cCceEEEccC-C-----cEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcc
Q 012015 422 TGDLCYIDED-G-----FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVA 467 (473)
Q Consensus 422 TgD~~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~ 467 (473)
|||+++++++ | .+++.||.||+|+++|.+|+|.+||.+|.++|+|.
T Consensus 293 TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~ 344 (422)
T TIGR02155 293 TRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELS 344 (422)
T ss_pred cCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcC
Confidence 9999999876 4 57899999999999999999999999999999997
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.98 E-value=8.5e-30 Score=251.50 Aligned_cols=430 Identities=17% Similarity=0.244 Sum_probs=312.1
Q ss_pred CCHHHHhcccccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHH
Q 012015 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~l 113 (473)
.++.|+|.++++.+ ||.+|+..- .+..++||++|.++|.+++..|+.+..+++||+|++++++++|++++++
T Consensus 770 ~~ile~Lq~R~a~t----p~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 770 LTILEILQWRAAKT----PDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHhhcC----CCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHH
Confidence 68999999999999 999999763 2347999999999999999999987889999999999999999999999
Q ss_pred HHHHhCCeEecCCCCC------CHHHHHHHHhhcCCeEEEEccchHHHHhcCC---------CeEEEEcCCChhhhhccc
Q 012015 114 SLLSLGVIISPANPVN------TESEISRQIQLSNPVIAFATSSVVHKLAKLK---------HRTILIDSPEFDSMTMSW 178 (473)
Q Consensus 114 A~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 178 (473)
||+.+|.+++|+.|.- +...+..+++.+++..|++++.....++... ...+. +.+++..-....
T Consensus 846 ~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~-~~~~~~~t~~k~ 924 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLIL-VLPKLPETIRKR 924 (1363)
T ss_pred HHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhh-cccccchhhhhh
Confidence 9999999999998854 3467889999999999999988776665321 11111 111111000100
Q ss_pred -----CCCccccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhHHHHH
Q 012015 179 -----NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF 253 (473)
Q Consensus 179 -----~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~l 253 (473)
......++....++.+|++-+.--++|.--++.++|..+++.........+...+...+.+..|.+.+.-+..+|
T Consensus 925 ~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcL 1004 (1363)
T KOG3628|consen 925 KKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCL 1004 (1363)
T ss_pred hhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHH
Confidence 001122233445678999999888999999999999999998888777775555555666655555544447889
Q ss_pred HHhhhcCeEEEecC----CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCC------ceEEEecCCCCCHHH
Q 012015 254 RAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS------LETVACGAAPLGKDT 323 (473)
Q Consensus 254 ~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~------lr~v~~~G~~l~~~~ 323 (473)
...+.|.+.+++++ .++..|+..++++++.-++.+-..+..+.+.......+++. .-.+...-+.....+
T Consensus 1005 lgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~al 1084 (1363)
T KOG3628|consen 1005 LGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIAL 1084 (1363)
T ss_pred HHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHH
Confidence 99999999888875 47899999999999999988888887777654433333321 123334455666677
Q ss_pred HHHHHHhCCCC-----eEEeecCCcccccccccccCCC-------------------------CCCCCCCccccCCCcEE
Q 012015 324 IMAFASKFPKV-----VLVQAYGLTESTAGVFRTVGPD-------------------------ECRRWGSTGRLSAGLEA 373 (473)
Q Consensus 324 ~~~~~~~~~~~-----~~~~~yG~tE~~~~~~~~~~~~-------------------------~~~~~~~~G~p~~~~~~ 373 (473)
.+.+.+.|... .+--.|+.----.++....... ........|...+++++
T Consensus 1085 i~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i 1164 (1363)
T KOG3628|consen 1085 IASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDI 1164 (1363)
T ss_pred HHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCccccccee
Confidence 88888776211 2333344332222222211000 00001123888899999
Q ss_pred EEEcCCCCCCCCCCCccEEEEecCccccccCCCccccc-cccC---------CCCeeecCceEEEcc------C----Cc
Q 012015 374 KIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTS-ATLL---------PDGWMRTGDLCYIDE------D----GF 433 (473)
Q Consensus 374 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~-~~~~---------~~~~~~TgD~~~~~~------~----g~ 433 (473)
.|++|++-.+|.+|+.||||+.|..-+.+|+...+..+ ..|. ..+|-||||+|+... . .-
T Consensus 1165 ~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~ 1244 (1363)
T KOG3628|consen 1165 AIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDL 1244 (1363)
T ss_pred EEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeee
Confidence 99999999999999999999999888887765422211 1111 235999999999842 2 25
Q ss_pred EEEEeccCCeEEEcCeeeChHHHHHHH-hcCCCcceEEEc
Q 012015 434 LFIVDRLKDLIKYKGYQVAPAELEHLL-LSHREVADAAVI 472 (473)
Q Consensus 434 l~~~GR~~d~i~~~G~~v~~~~IE~~l-~~~~~v~~~~vv 472 (473)
||++|-.++.+.++|.+.+|.+||.-+ +.||.|.+|+|+
T Consensus 1245 LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF 1284 (1363)
T KOG3628|consen 1245 LYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVF 1284 (1363)
T ss_pred EEEeecccceeeecCcccCcchHHHHHHHhcccccceeeE
Confidence 899999999999999999999999966 578999999986
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.9e-28 Score=238.89 Aligned_cols=256 Identities=16% Similarity=0.161 Sum_probs=188.9
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeEEEec
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~v~~~ 266 (473)
..++++.+.+||||||.||+|.+||+++..........+ .+..++|+++...|..+..+. ...+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 456788999999999999999999999876654433221 267788999998888776555 34456677888765443
Q ss_pred CCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCC--CCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcc
Q 012015 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (473)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE 344 (473)
. ....++.|++++++++.++|+.+..+++.....+. ...++|.+++|||++++++.+.+.+.| ++++++.||+||
T Consensus 164 ~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE 240 (445)
T TIGR03335 164 K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTE 240 (445)
T ss_pred c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhh
Confidence 3 34668999999999999999988877764433332 246899999999999999999999988 899999999999
Q ss_pred cccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCc
Q 012015 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (473)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD 424 (473)
++....+ ........+.+.+.++|+|++++.++++|+.|||++++-...- ......+ --|+|||
T Consensus 241 ~~~~~~c-------~~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~------~r~~~Pl---iRYrtgD 304 (445)
T TIGR03335 241 GTMCGEC-------QAVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG------ERCGSLL---INYDTED 304 (445)
T ss_pred hhheEEe-------cCCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC------ccCCceE---EEeecCc
Confidence 8632211 1111222333567899999888889999999999998743100 0000111 1399999
Q ss_pred eEEEcc-C----C----cEEEEeccCCeEEEcCeeeChHHHHHHHhcCC
Q 012015 425 LCYIDE-D----G----FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHR 464 (473)
Q Consensus 425 ~~~~~~-~----g----~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~ 464 (473)
++++.. + | .+...||.||+++++|.+|+|.+||++|.+++
T Consensus 305 ~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~ 353 (445)
T TIGR03335 305 TTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRE 353 (445)
T ss_pred eEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccC
Confidence 999732 2 2 24557999999999999999999999999953
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=5.7e-26 Score=201.14 Aligned_cols=205 Identities=13% Similarity=0.055 Sum_probs=157.1
Q ss_pred hcccccCCCCCCCCCcEEEEC-C---CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhC
Q 012015 44 VSSLRATLPWRDDDTVALINS-V---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (473)
Q Consensus 44 ~~~~~~~~~~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 119 (473)
+...++++ |+++|++.. + +++++||+||.++++++|+.|++.+|+++||+|+|+++|+++++++++|++++|
T Consensus 2 ~~~~~~~~----p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G 77 (227)
T TIGR03089 2 LSPLLAAD----PASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTG 77 (227)
T ss_pred hhhhhhhC----CCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 34556667 999999753 1 234799999999999999999862599999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEc-----C----------CChhhhhcccCCCccc
Q 012015 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILID-----S----------PEFDSMTMSWNSKHEL 184 (473)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~ 184 (473)
++++|++ .+++++++++++......... ..+.+. . .++........ ...
T Consensus 78 ~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 141 (227)
T TIGR03089 78 VEVVLAG-------------DPDADVVVTGPDRLAAAAGSG-EVVALSLDPLGRRVAGELPPGVIDFAPEVRVHG--DQF 141 (227)
T ss_pred CEEEeCC-------------CCCCCEEEeCcchhhhcccCC-ceEEEeccccccCCCCCCCCcccchhhhhhccC--CCC
Confidence 9999995 688999999988777654222 222221 0 01111111110 011
Q ss_pred ccc-ccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHhH-HHHHHHhhhcCeE
Q 012015 185 DRA-KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (473)
Q Consensus 185 ~~~-~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~-~~~l~~l~~G~~~ 262 (473)
.+. ...++|++.++||||+ +|+++.... ... +..++|+++ .+|++|.+|+ ..++.++..|+++
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~ 206 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSL 206 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceE
Confidence 112 3456899999999986 566655544 222 578899999 9999999999 6789999999999
Q ss_pred EEecCCCHHHHHHHHHHcccc
Q 012015 263 VVMQRFDLKMMLKAVEEFRVT 283 (473)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t 283 (473)
++.++|++..+++.|+++|+|
T Consensus 207 v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 207 VLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999987
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=5.1e-26 Score=231.82 Aligned_cols=422 Identities=17% Similarity=0.135 Sum_probs=269.1
Q ss_pred CHHHHhcccccCCCCCCCCCcEEEEC----CC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH
Q 012015 39 SAVDYVSSLRATLPWRDDDTVALINS----VT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (473)
Q Consensus 39 ~l~~~~~~~~~~~~~~~p~~~a~~~~----~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~ 112 (473)
++..-+.+.+.+. |...+..+- .. -..+||++....++.+++.|.. .|...|+.|++++..+.++++..
T Consensus 37 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v 111 (1032)
T KOG1178|consen 37 TLEDSFRRELAEA----PENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSV 111 (1032)
T ss_pred chhhHHHHHHhhc----ccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeee
Confidence 4555666667777 666665432 11 2689999999999999999999 89999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCC----HHHHHHHHhh-cCCeEEEEccchHHHHh--cC--CCeEEEEcCCChhhhhcccCCCcc
Q 012015 113 FSLLSLGVIISPANPVNT----ESEISRQIQL-SNPVIAFATSSVVHKLA--KL--KHRTILIDSPEFDSMTMSWNSKHE 183 (473)
Q Consensus 113 lA~~~~G~~~v~l~~~~~----~~~l~~~l~~-~~~~~ii~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~ 183 (473)
++++++|..+++++|+++ ++.+..+... .....-+......-.+. +. +..+... ...+..+ ......
T Consensus 112 ~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~---~~~~~~ 187 (1032)
T KOG1178|consen 112 FAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMV---LHNEDT 187 (1032)
T ss_pred eehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhh---hccCCC
Confidence 999999999999999999 3322222111 11112222221111111 00 1111111 1112211 111112
Q ss_pred ccccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh-hhHHhHHHHHHHhhhcCeE
Q 012015 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY-FHIYGLFFCFRAAALMETA 262 (473)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~pl-~~~~g~~~~l~~l~~G~~~ 262 (473)
........+..+.+.||||+||.||+|..+|..+.....+....+ .....++.-..... ++..-.......+..|..+
T Consensus 188 r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l 266 (1032)
T KOG1178|consen 188 REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-PPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNL 266 (1032)
T ss_pred cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-CcCccchhhhhheeecccchHHHHhhHhhcCcee
Confidence 223345567789999999999999999999999999998888877 45555543111112 2222223344555556555
Q ss_pred EEecCC---CHHHHHHHHHHcccceEEecHHHHHHHhcCCCCC-------------CCCCCCceEEEecCCCCCHHHHHH
Q 012015 263 VVMQRF---DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD-------------GYDLSSLETVACGAAPLGKDTIMA 326 (473)
Q Consensus 263 v~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------~~~l~~lr~v~~~G~~l~~~~~~~ 326 (473)
..+... .+.++...+++++++..+.+|++.++++...... ....+.|+....+|++....++..
T Consensus 267 ~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s 346 (1032)
T KOG1178|consen 267 LVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTS 346 (1032)
T ss_pred ecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhh
Confidence 555332 3789999999999999999999988887654321 111247899999999999999997
Q ss_pred HHHhCCCCeEEeecCCcccccccccccCCC--CCCCC---CCccccCC----CcEEEEEcCCCCCCCCCCCccEEEE---
Q 012015 327 FASKFPKVVLVQAYGLTESTAGVFRTVGPD--ECRRW---GSTGRLSA----GLEAKIVDPETGDSLPPGKEGELSI--- 394 (473)
Q Consensus 327 ~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~---~~~G~p~~----~~~~~i~d~~~~~~~~~g~~Gel~v--- 394 (473)
+...+...-...-|+.++..+.+......+ ..... ..+++-.. .....+.. ..+.+.+.++.+....
T Consensus 347 ~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~ 425 (1032)
T KOG1178|consen 347 TFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQ 425 (1032)
T ss_pred hhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceeecccc
Confidence 777764444555588888777665432111 00000 11111111 11122222 3334443333222222
Q ss_pred -ecCccccccCCCccccccccC-----CCCeeecCceEEEccCCcEEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcce
Q 012015 395 -RGPTIMKGYVGEPEVTSATLL-----PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD 468 (473)
Q Consensus 395 -~~~~~~~gy~~~~~~~~~~~~-----~~~~~~TgD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~ 468 (473)
.+.++..|| ..++.....+. .+..|+|||+|+..++|.+.+.||.|++||++|+|+.+.||++++..+|.|.+
T Consensus 426 ~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~ 504 (1032)
T KOG1178|consen 426 NLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKE 504 (1032)
T ss_pred cccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhh
Confidence 223334442 23333222211 13479999999998999999999999999999999999999999999999999
Q ss_pred EEEc
Q 012015 469 AAVI 472 (473)
Q Consensus 469 ~~vv 472 (473)
+.++
T Consensus 505 ~itl 508 (1032)
T KOG1178|consen 505 AITL 508 (1032)
T ss_pred hhee
Confidence 8764
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.93 E-value=1.2e-24 Score=202.57 Aligned_cols=261 Identities=27% Similarity=0.335 Sum_probs=203.3
Q ss_pred ccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecCh-hhHHhHHHHHHHhhhcCeEEE
Q 012015 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPY-FHIYGLFFCFRAAALMETAVV 264 (473)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl-~~~~g~~~~l~~l~~G~~~v~ 264 (473)
....++...+-.||||||+|+.+.+++..+..+...+.+.+ .+...+|++....-. .+..|+....++-..|++++.
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456677799999999999999999999887776655544 356677776654442 122333444555667887777
Q ss_pred ecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCC--CCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCC
Q 012015 265 MQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (473)
Q Consensus 265 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~ 342 (473)
..+-+.+.-+++++.+++|++.++|+.+..|++...+.+ ..-.++|.+++|+|++++++++.+.+.| ++..++.||+
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecccc
Confidence 766788999999999999999999999999998876654 3345899999999999999999999999 9999999999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeec
Q 012015 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (473)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 422 (473)
||..+.... ++.......-..+...+.|+||++++.+++|+.|||+++.-. ++.+ +---|+|
T Consensus 245 tE~~g~g~~-----eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-PlIRYrt 306 (438)
T COG1541 245 TEGFGPGAG-----ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PLIRYRT 306 (438)
T ss_pred ccccCCccc-----ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ceEEEEc
Confidence 999766411 112212333455778899999999999999999999997622 1111 1124999
Q ss_pred CceEEEccC----Cc-----EEEEeccCCeEEEcCeeeChHHHHHHHhcCCCcc
Q 012015 423 GDLCYIDED----GF-----LFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVA 467 (473)
Q Consensus 423 gD~~~~~~~----g~-----l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~ 467 (473)
||+.....+ |+ -.+.||.||++++.|.+|+|..||.+|.+.+.+.
T Consensus 307 gDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~ 360 (438)
T COG1541 307 GDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVT 360 (438)
T ss_pred CCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCC
Confidence 999999653 32 4699999999999999999999999999999887
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.75 E-value=1.5e-16 Score=158.73 Aligned_cols=421 Identities=14% Similarity=0.172 Sum_probs=283.3
Q ss_pred CHHHHhcccccCCCCCCCCCcEEEEC-CCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHH
Q 012015 39 SAVDYVSSLRATLPWRDDDTVALINS-VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYF 113 (473)
Q Consensus 39 ~l~~~~~~~~~~~~~~~p~~~a~~~~-~~~--~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~l 113 (473)
+....+..+...+ +..+|.+.- +.| ..+||..+..++.+.|+.-+.+-|+.++|+|.++...+ .++++..+
T Consensus 95 d~~avl~~~~nhs----~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~ 170 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHS----ATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLF 170 (1363)
T ss_pred chHHHHHhhccCC----CCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhc
Confidence 4455555554444 556666543 123 68999999999999999444448999999999987554 89999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHhcCCCeEEEEcCCChhhhhcccCCCc--------ccc
Q 012015 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKH--------ELD 185 (473)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 185 (473)
+|..+|.+.+|+.+..+.+++..+++..+.+++++............ -..++......+.... ...
T Consensus 171 gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~------~~~s~~k~v~~w~t~~~k~~~~~~k~~ 244 (1363)
T KOG3628|consen 171 GCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDN------SPVSLAKAVAWWKTNDFKGNYTKDKIK 244 (1363)
T ss_pred cccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc------CcccHHHHHHhhhcccccceeehhhcc
Confidence 99999999999999999999999999999999998776554433211 1122333222222110 111
Q ss_pred ccccCCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhcc-------------------CCCCCCCcEEEEecChhhH
Q 012015 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS-------------------SPKRVSPAVMLFTMPYFHI 246 (473)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~-------------------~~~~~~~~~~l~~~pl~~~ 246 (473)
.+..... ..+|-||++++|.--|+..+|+ +..+.+..... ....+..+.++..+.....
T Consensus 245 ~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~ 322 (1363)
T KOG3628|consen 245 KPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQ 322 (1363)
T ss_pred CCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccc
Confidence 1112222 7899999999999888988888 43332221111 1234556677776666666
Q ss_pred HhH-HHHHHHhhhcCeEEEecC---CCHHHHHHHHHHcccceEEecHHHHHHHhcCCCC-----------CCCCCCCceE
Q 012015 247 YGL-FFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-----------DGYDLSSLET 311 (473)
Q Consensus 247 ~g~-~~~l~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----------~~~~l~~lr~ 311 (473)
.|+ +.++.+++.|.+.+.+++ +.+..+.+.+.++|.+++..-...+......... +..+++++|.
T Consensus 323 lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~ 402 (1363)
T KOG3628|consen 323 LGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKG 402 (1363)
T ss_pred cchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceee
Confidence 777 779999999999999886 6788999999999999988775555544432211 2246889999
Q ss_pred EEecCCCCCHHHHHHHHHhC----CCCe-----------------EEeecCCcccccccccccCCC--C-----------
Q 012015 312 VACGAAPLGKDTIMAFASKF----PKVV-----------------LVQAYGLTESTAGVFRTVGPD--E----------- 357 (473)
Q Consensus 312 v~~~G~~l~~~~~~~~~~~~----~~~~-----------------~~~~yG~tE~~~~~~~~~~~~--~----------- 357 (473)
+.+.-..+..+..+-....+ +... .+..-+.+|.+.......... .
T Consensus 403 C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~ 482 (1363)
T KOG3628|consen 403 CMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEA 482 (1363)
T ss_pred eEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccc
Confidence 99999888887655444332 1111 122223345444333221100 0
Q ss_pred ----------CC-----CCCCccccCC-CcEEEEEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCC-----
Q 012015 358 ----------CR-----RWGSTGRLSA-GLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP----- 416 (473)
Q Consensus 358 ----------~~-----~~~~~G~p~~-~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~----- 416 (473)
.. ....+|+..| ++.+.++++++...|.++++|||||.++++..+|+.-+..|...|..
T Consensus 483 L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s 562 (1363)
T KOG3628|consen 483 LKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVES 562 (1363)
T ss_pred cccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccc
Confidence 00 0112355444 45678889899999999999999999999999999777776655531
Q ss_pred -------CCeeecCceEEEccCCcEEEEeccCCeEE-EcCeeeChHH----------HHHHHhcCCCcceEEEc
Q 012015 417 -------DGWMRTGDLCYIDEDGFLFIVDRLKDLIK-YKGYQVAPAE----------LEHLLLSHREVADAAVI 472 (473)
Q Consensus 417 -------~~~~~TgD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~----------IE~~l~~~~~v~~~~vv 472 (473)
..+.|||-+|++++ |.+|++|-++|++. +.|.+.+..+ |+.+.+..+.|-+++++
T Consensus 563 ~~~~~~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf 635 (1363)
T KOG3628|consen 563 SGKPPSNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAF 635 (1363)
T ss_pred cCCCCccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeee
Confidence 23899999999965 45666665555554 4777766544 66777788888888765
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.66 E-value=9.5e-15 Score=140.31 Aligned_cols=241 Identities=16% Similarity=0.129 Sum_probs=151.3
Q ss_pred EEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEe--cChhhHHhHHHHHHHhhhcCeEEEec-CC
Q 012015 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFT--MPYFHIYGLFFCFRAAALMETAVVMQ-RF 268 (473)
Q Consensus 194 ~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~--~pl~~~~g~~~~l~~l~~G~~~v~~~-~~ 268 (473)
...+..||||||.|-.+..+......+........ .+...++++... .+. +. +..+... ...+...+ ..
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~l---y~~~~~~--~~~~~~~~l~~ 174 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NL---YQSVNNR--WISLDFFDLLA 174 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hH---HHHHHhc--cceeeecCCCc
Confidence 45577899999999999999887654443322222 123333333332 111 11 1111111 11011111 14
Q ss_pred CHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCeEEeecCCcccccc
Q 012015 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (473)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 348 (473)
+.+.+++.|++++++++.+.|+.+..|++.....+.+ .+++.++++||+++++..+.+.+.| ++++++.||+|| |.+
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~l 251 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFL 251 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hhe
Confidence 6789999999999999999999999999875544433 4789999999999999999999999 899999999999 543
Q ss_pred cccccCCCCCCCCCCccccCCCcEEE--EEcCCCCCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceE
Q 012015 349 VFRTVGPDECRRWGSTGRLSAGLEAK--IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLC 426 (473)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~p~~~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~ 426 (473)
+..+ . .+..----..+.++ ++|++ ++ +..+|++=. + ....+. -|+|||++
T Consensus 252 a~eC------~-~g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~------n----~~~PlI---RYrtGD~~ 303 (430)
T TIGR02304 252 ASTC------R-CGTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFT------R----TTQPIV---RYRLNDIL 303 (430)
T ss_pred EEec------C-CCCEEEccccEEEEeeEECCC-Cc-------eEEEEecCC------C----ccceEE---eeeCCCEE
Confidence 3221 1 11121112233444 77733 32 334444311 1 001111 39999999
Q ss_pred EEccC----Cc----E-EEEeccCCeEEE---cCee--eChHHHHHH-HhcCCCcceEEE
Q 012015 427 YIDED----GF----L-FIVDRLKDLIKY---KGYQ--VAPAELEHL-LLSHREVADAAV 471 (473)
Q Consensus 427 ~~~~~----g~----l-~~~GR~~d~i~~---~G~~--v~~~~IE~~-l~~~~~v~~~~v 471 (473)
...++ |. + .+.||.+|++++ +|.. |.|..|+.+ +...+.|.+.-+
T Consensus 304 ~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi 363 (430)
T TIGR02304 304 VESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRV 363 (430)
T ss_pred EeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEE
Confidence 88544 32 3 388999999996 4544 588889887 445688877644
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.27 E-value=5.8e-10 Score=104.96 Aligned_cols=228 Identities=17% Similarity=0.197 Sum_probs=137.5
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHH---hhccCCCCCC-CcEEEEecChhh---HHhH--HHHHHHhhhcC
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS---SFASSPKRVS-PAVMLFTMPYFH---IYGL--FFCFRAAALME 260 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~---~~~~~~~~~~-~~~~l~~~pl~~---~~g~--~~~l~~l~~G~ 260 (473)
..+++..++.||||||.|--+.+.+..+..+... ....+..... ...++...|-.. ..+. ...+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 3456778899999999886566665555444322 2232212222 233344344321 1111 22233334444
Q ss_pred eEEEec--CCCHHHHHHHHH----HcccceEEecHHHHHHHhcCCCCCCC--CCC-CceEEEecC------CCCC-HHHH
Q 012015 261 TAVVMQ--RFDLKMMLKAVE----EFRVTHAAVTPPIVVAMSKGGSTDGY--DLS-SLETVACGA------APLG-KDTI 324 (473)
Q Consensus 261 ~~v~~~--~~~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~-~lr~v~~~G------~~l~-~~~~ 324 (473)
. .... .+|.+.+...+. +.++..+++.|.++-.+....++.+. .|+ ..+.+-.|| +.++ .++.
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 4 3443 367777776664 45678889988866655554443333 343 455666665 5675 5888
Q ss_pred HHHHHhCCC---CeEEeecCCcccccccccccCCCCCCCCCCccccCCCcEEEEEcCCCCCCCCCCCccEEEEecCcccc
Q 012015 325 MAFASKFPK---VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK 401 (473)
Q Consensus 325 ~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 401 (473)
+.+.+.|+. ..+++.||+||.....+.. ... -..+|-. +.|+|+++.++++.|+.|-|-+-.+...
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~---~~~------~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~- 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYEC---GHG------HFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT- 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeC---CCC------cccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-
Confidence 888888822 3799999999976554331 111 1122222 7778999999999999999988665432
Q ss_pred ccCCCccccccccCCCCeeecCceEEEccC--------CcEEEEeccCC
Q 012015 402 GYVGEPEVTSATLLPDGWMRTGDLCYIDED--------GFLFIVDRLKD 442 (473)
Q Consensus 402 gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~--------g~l~~~GR~~d 442 (473)
. .-+...|.|+|.+..+ .++.++||.+.
T Consensus 315 s-------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 315 S-------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred C-------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 1 1233679999988654 27999999763
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.16 E-value=5.3e-11 Score=111.89 Aligned_cols=52 Identities=29% Similarity=0.373 Sum_probs=49.3
Q ss_pred CCCeeecCceEEE-ccCCcEEEEeccCCeEEEcC---eeeChHHHHHHHhcCCCcceEEEcC
Q 012015 416 PDGWMRTGDLCYI-DEDGFLFIVDRLKDLIKYKG---YQVAPAELEHLLLSHREVADAAVIP 473 (473)
Q Consensus 416 ~~~~~~TgD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~IE~~l~~~~~v~~~~vvg 473 (473)
.+|||+|||+|++ |+||+|+|.||.+ +| ++|+|. ||++|.+||+|.||+|||
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvg 262 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIAL 262 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEE
Confidence 6899999999998 7999999999998 88 799999 999999999999999986
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.22 E-value=2.4e-05 Score=78.41 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=78.8
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCe-EEeecCCcccccccccccCCCCCCCCCCccccCCCc-EEEEEcCCC---
Q 012015 306 LSSLETVACGAAPLGKDTIMAFASKFPKVV-LVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIVDPET--- 380 (473)
Q Consensus 306 l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~-~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~d~~~--- 380 (473)
.++|+.+.+.+..-.....+.+++.+++.. +...|++||+ .+.+. .. .. ...+.+.++. -.+-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~-~~---~~--~~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIP-LD---PE--DPGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEE-S----CC--C--EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEe-cC---CC--CCceEeecCCeEEEEEeccCCcc
Confidence 578997766555555566778888887654 4468999995 32222 11 11 1222333322 334444222
Q ss_pred -----C-----CCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEcc--CC--cEEEEeccCCeEEE
Q 012015 381 -----G-----DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE--DG--FLFIVDRLKDLIKY 446 (473)
Q Consensus 381 -----~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~--~g--~l~~~GR~~d~i~~ 446 (473)
. ..+..|+.-||+|+..+ |.| -|+.||+++... ++ .+.|+||.+.++.+
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l 401 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL 401 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-S
T ss_pred cccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeec
Confidence 1 24567888899997642 222 299999999842 34 69999999999999
Q ss_pred cCeeeChHHHHHHHhcC
Q 012015 447 KGYQVAPAELEHLLLSH 463 (473)
Q Consensus 447 ~G~~v~~~~IE~~l~~~ 463 (473)
.|++++-.+|+.++.+.
T Consensus 402 ~gEkl~e~~v~~av~~~ 418 (528)
T PF03321_consen 402 FGEKLSEEQVQEAVARA 418 (528)
T ss_dssp SS--EEHHHHHHHHHHH
T ss_pred ceeecCHHHHHHHHHHH
Confidence 99999999999998764
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.21 E-value=0.00037 Score=69.63 Aligned_cols=138 Identities=14% Similarity=0.112 Sum_probs=87.7
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe-ecCCcccccccccccCCCCCCCCCCccccCCCcE-EEEEcCCCC--
Q 012015 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLE-AKIVDPETG-- 381 (473)
Q Consensus 306 l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~-~~i~d~~~~-- 381 (473)
.++++.|.+.-..-.......++..+++.++.. .|++||+-..+ . ..+ .+..........|+.. .+.++.+++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~gi-n-l~p-~~~p~~~sy~L~p~~~yFEFip~~~~~~ 368 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGI-N-LKP-LSDPSDVSYTLLPNMAYFEFLPVDKNNG 368 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEe-c-cCc-CCCccCCceeecCCcEEEEEeecCCCcc
Confidence 577888776555556677778877778887665 89999953322 1 111 1111112233334442 333322211
Q ss_pred ---------------------------CCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEc----c
Q 012015 382 ---------------------------DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----E 430 (473)
Q Consensus 382 ---------------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~----~ 430 (473)
..++.|+.-||+|+.-+ |.+ -|+.||+.++. .
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~GF~n~ 431 (606)
T PLN02247 369 EVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVTGFYNN 431 (606)
T ss_pred cccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCC
Confidence 13456777788886521 111 28999999873 3
Q ss_pred CCcEEEEeccCCeEEEcCeeeChHHHHHHHhcC
Q 012015 431 DGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSH 463 (473)
Q Consensus 431 ~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~ 463 (473)
--.|.|++|.+.+..+.|++++-.++..++.+.
T Consensus 432 ~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 432 APQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred CceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 357999999999999999999999998877653
No 135
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=98.09 E-value=0.00041 Score=69.17 Aligned_cols=138 Identities=16% Similarity=0.154 Sum_probs=86.2
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCeEEe-ecCCcccccccccccCCCCCCCCCCccccCCCcE-EEEEcCCC---
Q 012015 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLE-AKIVDPET--- 380 (473)
Q Consensus 306 l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~-~~i~d~~~--- 380 (473)
.++++.|.+.-..-.......++..+++.++.. .|++||+-..+ . ..+ .+..........|+.. .+.++.+.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~gi-n-l~P-~~~p~~~sy~L~p~~~yFEFip~~~~~~ 379 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGV-N-LNP-LCKPSEVSYTLIPTMAYFEFLPVHRNNG 379 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEe-c-cCC-CCCcccceeeecCCcEEEEEeeccCccc
Confidence 577888776655556666677777777877664 79999953322 1 111 1111112223334442 23332111
Q ss_pred ----------------C-----CCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEc----cCCcEE
Q 012015 381 ----------------G-----DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----EDGFLF 435 (473)
Q Consensus 381 ----------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~----~~g~l~ 435 (473)
+ ..++.|+.-||+|+.-+ |.+ -|+.||+.++. ..-.|.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P~~~ 442 (612)
T PLN02620 380 VTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAPQFS 442 (612)
T ss_pred ccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCceEE
Confidence 1 12456777888886521 111 28999999884 335799
Q ss_pred EEeccCCeEEEcCeeeChHHHHHHHhcC
Q 012015 436 IVDRLKDLIKYKGYQVAPAELEHLLLSH 463 (473)
Q Consensus 436 ~~GR~~d~i~~~G~~v~~~~IE~~l~~~ 463 (473)
|++|.+-+..+.|++++-.++..++.+.
T Consensus 443 Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 443 FICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EEeecCceeecccccCCHHHHHHHHHHH
Confidence 9999999999999999999988777643
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.05 E-value=0.00026 Score=71.33 Aligned_cols=133 Identities=16% Similarity=0.129 Sum_probs=81.0
Q ss_pred CCC---ceEEEecCCCCCHHHHHHHHHhCCCC-eEEeecCCcccccccccccCCCCCCCCCCccc--cCCCcEEEEEcCC
Q 012015 306 LSS---LETVACGAAPLGKDTIMAFASKFPKV-VLVQAYGLTESTAGVFRTVGPDECRRWGSTGR--LSAGLEAKIVDPE 379 (473)
Q Consensus 306 l~~---lr~v~~~G~~l~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~--p~~~~~~~i~d~~ 379 (473)
.++ +..+..||-. .-...++..+++. .+...|++||+- +.+.. . .. ..+...+. .+.+.-.+-++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~-~gi~~-~-~~-~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESY-FGINL-N-PM-CKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceE-EEeec-C-CC-CCCCCcceEecCCcEEEEeeecc
Confidence 466 5555555543 5556666666655 455789999953 22221 1 00 01111111 1223444444211
Q ss_pred -C------------CCCCCCCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEcc----CCcEEEEeccCC
Q 012015 380 -T------------GDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE----DGFLFIVDRLKD 442 (473)
Q Consensus 380 -~------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~----~g~l~~~GR~~d 442 (473)
. -..++.|+.-+|+|+..+ |.| -|+.||++++.. --.|.|+||.+.
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~ 436 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKNV 436 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCCc
Confidence 1 123456777888886521 111 299999999843 237899999999
Q ss_pred eEEEcCeeeChHHHHHHHhc
Q 012015 443 LIKYKGYQVAPAELEHLLLS 462 (473)
Q Consensus 443 ~i~~~G~~v~~~~IE~~l~~ 462 (473)
++.+.|+++.-.+++.++.+
T Consensus 437 ~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 437 LLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred ceecccccCCHHHHHHHHHH
Confidence 99999999999999998876
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.72 E-value=0.088 Score=50.61 Aligned_cols=87 Identities=17% Similarity=0.116 Sum_probs=72.8
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
-+|+.|+..-+..+|+.|.. .|..+||+|.++..-+ ..-+-..+|+.++|+.++|+.+ -..+.-..++++.++.+|
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tvI 186 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTVI 186 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcEE
Confidence 59999999999999999998 8999999999876522 2227788999999999999987 344566778999999999
Q ss_pred EEccchHHHHh
Q 012015 147 FATSSVVHKLA 157 (473)
Q Consensus 147 i~~~~~~~~~~ 157 (473)
.+.++....+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99998776554
No 138
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=89.67 E-value=2.7 Score=41.35 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=66.2
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
.+|..++......++..+.. .|+++||++....+.+. ......++....|+.++++++.. .+.+...+++.++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 47888887777777777776 89999999887665443 22334677889999999887654 5777889999999999
Q ss_pred EEccchHHHH
Q 012015 147 FATSSVVHKL 156 (473)
Q Consensus 147 i~~~~~~~~~ 156 (473)
+..+.....+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9888776544
No 139
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=89.27 E-value=3.7 Score=40.71 Aligned_cols=82 Identities=12% Similarity=0.188 Sum_probs=61.9
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (473)
..+|..++...+...+..+.. .|+.+||++.+..+.+.. .....+|+..+|+.++|... ......+++..++.+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~ 179 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTG 179 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCE
Confidence 358999999888888888877 899999999998866543 23455788899998887653 234466788899988
Q ss_pred EEEccchH
Q 012015 146 AFATSSVV 153 (473)
Q Consensus 146 ii~~~~~~ 153 (473)
++......
T Consensus 180 l~~~ps~l 187 (445)
T TIGR03335 180 IVASVFKL 187 (445)
T ss_pred EEECHHHH
Confidence 87765543
No 140
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=84.85 E-value=6.2 Score=34.97 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=54.1
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHH
Q 012015 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESE 133 (473)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~ 133 (473)
++.+|++... +. .|...+...+ .. .++.++|++. .+|-.. .+...+++++.+|+..+.+ +.+++++
T Consensus 149 ~~D~a~l~yT-sg-~~~~~~~~~~-------~~-~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~ 216 (227)
T TIGR03089 149 ATAPALVAGG-GE-WTGAELVAAA-------RA-AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPAR 216 (227)
T ss_pred CCcceeeecc-cc-ccHHHHHHHH-------hh-cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHH
Confidence 5677776542 22 2444433322 34 7889999999 887665 4445789999999998887 6899999
Q ss_pred HHHHHhhcCC
Q 012015 134 ISRQIQLSNP 143 (473)
Q Consensus 134 l~~~l~~~~~ 143 (473)
+-..+++.++
T Consensus 217 ~l~~i~~~~v 226 (227)
T TIGR03089 217 LDQIAETERV 226 (227)
T ss_pred HHHHHHhhcC
Confidence 9888888765
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.94 E-value=17 Score=36.51 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=70.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH-HHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~ 127 (473)
++.++++.. .+| ..+|++.+...+..... . .+++++|++....+....+ ....++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 456666643 223 35899998876666554 3 6789999998877654322 3344558889999887766
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. +...+...+++.++.++++.+.....+.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 270 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLL 270 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHH
Confidence 4 8899999999999999999888776654
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.77 E-value=14 Score=37.25 Aligned_cols=97 Identities=21% Similarity=0.179 Sum_probs=70.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .+| ..+|+..+...+..+... .+++++|++...++... .+...+++++..|+.+++.
T Consensus 165 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 165 PDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEY----LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHh----hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 567776543 223 368999887665554332 57789999988776543 3455678999999988875
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
+..+++.+...+++.++.++...+.....+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 270 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLL 270 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHH
Confidence 5678889999999999999998887776554
No 143
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=76.84 E-value=25 Score=35.87 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=69.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .|| ..+|++.+...+.... .. .++.++|++...+|-. ..+...++..+..|+..+...
T Consensus 182 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 182 PEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KF-FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred cCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---Hh-cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 677877653 233 4689998876654433 23 5778899888777632 233344677788898887665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
...+++.+...+++.++.++...+.....+.
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 5678889999999999999998887766543
No 144
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=74.80 E-value=12 Score=36.34 Aligned_cols=98 Identities=21% Similarity=0.259 Sum_probs=69.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
+++++++.. .+| ..+|++.+...+..+. +....+++ |++...+|-+. .++..+++++..|+..+..+
T Consensus 154 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 154 PDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp TTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred ccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeeccccccccccccccccccccccccccc
Confidence 678887653 233 4689999999988877 44312333 66655555543 33367899999999999887
Q ss_pred CCCC--HHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
.... ++.+...+++.++.++++.+.....+.
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 262 (417)
T PF00501_consen 230 PFDLFDPESLLELISRYKPTILFAVPSMLEALL 262 (417)
T ss_dssp SHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHH
T ss_pred cccccccccchhccccccccccccccccccccc
Confidence 6544 567788999999999999888777664
No 145
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=74.21 E-value=41 Score=32.47 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=71.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 127 (473)
+++++++.. .+| ..+|++.+...+..+.. . .+++++|++....+.... .+..+++.+..|+..+..+.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 566776642 222 45788888877766655 2 566889999887765544 45567888888988887776
Q ss_pred CCC--HHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
... ...+..++++.++..+++.+.....+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 555 788899999999999999888776654
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=72.93 E-value=36 Score=34.70 Aligned_cols=84 Identities=4% Similarity=0.035 Sum_probs=62.1
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCC--CCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (473)
..+|++.+...+..+. ...+++++|++....+- +..++..+++.+..|+..+......++..+...+++.++.+
T Consensus 217 v~~s~~~l~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~ 292 (559)
T PRK08315 217 ATLTHRNILNNGYFIG----EAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTA 292 (559)
T ss_pred EEeeHHHHHHHHHHHH----HhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeE
Confidence 4688888865555433 33678999998877664 34555667888999998886666778888889999999999
Q ss_pred EEEccchHHH
Q 012015 146 AFATSSVVHK 155 (473)
Q Consensus 146 ii~~~~~~~~ 155 (473)
+...+.....
T Consensus 293 ~~~~P~~~~~ 302 (559)
T PRK08315 293 LYGVPTMFIA 302 (559)
T ss_pred EecchHHHHH
Confidence 9887765543
No 147
>PLN03051 acyl-activating enzyme; Provisional
Probab=70.86 E-value=41 Score=33.85 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=66.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 127 (473)
++.+|++.. .|| ..+|++.+...+... ... .++.++|++...+|-+.. .+..+++++..|+..+..+.
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG 193 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC
Confidence 466766542 233 467887765543322 223 578889988766654332 23456788899999887765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
...++.+...+++.++.++...+.....+.
T Consensus 194 ~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 194 APLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred CCCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 566788899999999999998877765543
No 148
>PRK12583 acyl-CoA synthetase; Provisional
Probab=70.70 E-value=53 Score=33.45 Aligned_cols=96 Identities=11% Similarity=0.114 Sum_probs=67.2
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCC--CCcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++. +.+| ..+|++.+...+..+... .+++++|++....+- ....+..+++++..|+.++...
T Consensus 200 ~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 200 RDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES----LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH----hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 55566543 2233 468898886655544332 577889998877653 3556677788899999887545
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (473)
...++..+...+++.++..++..+.....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~ 304 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPTMFIA 304 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHHHHHH
Confidence 56778888899999999999887765543
No 149
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=69.12 E-value=36 Score=34.96 Aligned_cols=98 Identities=9% Similarity=0.047 Sum_probs=69.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .|| ..+|++.+...+.... .. .++.++|++....+... .....+++.+..|+..+...
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK---YV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---Hh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 566776542 233 3688888765443333 33 57788998766654442 23456788899999888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
...+++.+...+++.++.++...+.....+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7788999999999999999998887776654
No 150
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=69.06 E-value=57 Score=29.91 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=60.2
Q ss_pred CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCC----CHHHHHHHHhhcC
Q 012015 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----TESEISRQIQLSN 142 (473)
Q Consensus 67 ~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~ 142 (473)
+..+-.+-+ -|...+|..|++ . |..|..++.+....... .+...|..+..++... +.+++..+++..+
T Consensus 9 ~~~iG~GHv-~Rcl~LA~~l~~-~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~ 80 (279)
T TIGR03590 9 SSEIGLGHV-MRCLTLARALHA-Q----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEK 80 (279)
T ss_pred CccccccHH-HHHHHHHHHHHH-C----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcC
Confidence 344444444 467889999976 3 44677666655554433 3357787777775433 3557888899999
Q ss_pred CeEEEEcc-----chHHHHhcCCCeEEEEcCC
Q 012015 143 PVIAFATS-----SVVHKLAKLKHRTILIDSP 169 (473)
Q Consensus 143 ~~~ii~~~-----~~~~~~~~~~~~~~~~~~~ 169 (473)
++++|+|. +....++....+++++|+.
T Consensus 81 ~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 81 FDILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 99999985 2334444445566777653
No 151
>PLN02246 4-coumarate--CoA ligase
Probab=66.58 E-value=48 Score=33.69 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=68.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
|++++++.. .|| ..+|++.+...+...........++.++|++....+-.. .+...+++.+..|+.++..+
T Consensus 178 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 257 (537)
T PLN02246 178 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP 257 (537)
T ss_pred ccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 677776542 233 458888887665554443333367889999988776432 22344677888999988875
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
..+.+.+...+++.++.++...+.....+
T Consensus 258 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 258 -KFEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred -CCCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 46788888999999999888777665544
No 152
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=64.29 E-value=82 Score=32.26 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=67.7
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 127 (473)
++++|++. +.|| ..+|+..+...+.... .. .++.++|++....|-.. ..+...++.+..|+..+.. +
T Consensus 171 ~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 171 PDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 66777654 2333 3688888866544433 23 57789998887776432 2234567888889887765 5
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
.+++..+...+++.++.++...+.....+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 678889999999999999998887766553
No 153
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=64.24 E-value=66 Score=31.75 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=69.9
Q ss_pred CCCcEEEEC---CC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeC--CCCcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
||..+.+.. .| +.++|.-++.+.+..++.. .|+...+++++-.| +..-.++..+|++..|+..|.-.
T Consensus 233 pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r----~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~ 308 (596)
T KOG1177|consen 233 PDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGAR----AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA 308 (596)
T ss_pred CCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHH----hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC
Confidence 666665442 22 3689999999988877754 46665444443222 22344667788888999999989
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
|.+.+...-+.+.+.++..++..+...-.+.
T Consensus 309 ~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 309 PSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred CCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 9999999999999999999998876654443
No 154
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=63.13 E-value=72 Score=32.05 Aligned_cols=85 Identities=12% Similarity=0.083 Sum_probs=64.9
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
..+|+..+...+...... .+++++|++...++-+.. .+..+++++..|+..+.. +...++.+...+++.++.++
T Consensus 179 v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY----LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred EEEecHHHHHHHHHHHHH----hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 468999887766655533 466889999888875543 345678889999998866 45678889999999999999
Q ss_pred EEccchHHHHh
Q 012015 147 FATSSVVHKLA 157 (473)
Q Consensus 147 i~~~~~~~~~~ 157 (473)
...+.....+.
T Consensus 254 ~~~P~~~~~l~ 264 (515)
T TIGR03098 254 AAVPPLWAQLA 264 (515)
T ss_pred ecChHHHHHHH
Confidence 99888776654
No 155
>PRK08308 acyl-CoA synthetase; Validated
Probab=62.85 E-value=74 Score=30.96 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=67.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.++++.. .+| ..+|++.+...+..+... .++..+|++...+|-. ..++..++..+..|+..+..+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA----LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh----hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 566666542 233 468999888766555543 4567888887776554 334566788899999887664
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..++..+...+++.++.+++..+.....+.
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 205 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLMLHILG 205 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHHHHHH
Confidence 456778888899999999888877665553
No 156
>PRK08316 acyl-CoA synthetase; Validated
Probab=61.39 E-value=81 Score=31.72 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=67.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .+| ..+|++.+...+. ..... .++++++++...+|-.. .+...+++++..|+..++.+
T Consensus 170 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~---~~~~~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~ 245 (523)
T PRK08316 170 DDDLAQILYTSGTESLPKGAMLTHRALIAEYV---SCIVA-GDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD 245 (523)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH---HHHHH-hCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec
Confidence 456665542 222 4688888765533 33444 67899999988776543 23344667788899988764
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..+++.+...+++.++.++.+.+.....+.
T Consensus 246 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 275 (523)
T PRK08316 246 -APDPELILRTIEAERITSFFAPPTVWISLL 275 (523)
T ss_pred -CCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 457888999999999999998887665443
No 157
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=60.77 E-value=48 Score=31.84 Aligned_cols=64 Identities=14% Similarity=0.027 Sum_probs=48.4
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHhhcCCeEEEE
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~ii~ 148 (473)
..+.-.|+. +++++||-|.+ .+.-+++..=+++..|+.+|.+|- +.+++.++..+... .++||.
T Consensus 60 ~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 60 AALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 344445666 68999996654 578899999999999999998764 46788999888764 555653
No 158
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.68 E-value=60 Score=33.01 Aligned_cols=88 Identities=14% Similarity=0.020 Sum_probs=60.3
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
..+|...+...+ .+..+....++.++|++..+.|-... .....++.+.+|+.++...+..+++.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 357777664322 23333333678889998877654322 233346778899988877777889999999999999999
Q ss_pred EEccchHHHHh
Q 012015 147 FATSSVVHKLA 157 (473)
Q Consensus 147 i~~~~~~~~~~ 157 (473)
...+.....+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 88777665543
No 159
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=60.52 E-value=57 Score=31.86 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=66.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 127 (473)
+++++++.. .+| ..+|++.+...+..++.. .+++++|++....+-.. ..+..+++.+..|+..+..++
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 185 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKEN----LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhh----cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch
Confidence 456666532 223 368999988776665543 57799999988776432 223356788899998887754
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. +.+...+++.++.++...+.....+.
T Consensus 186 ~---~~~~~~l~~~~~t~~~~~P~~l~~l~ 212 (436)
T TIGR01923 186 F---NQLLEMIANERVTHISLVPTQLNRLL 212 (436)
T ss_pred H---HHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 3 37788899999999988877665554
No 160
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=59.68 E-value=63 Score=32.83 Aligned_cols=96 Identities=8% Similarity=0.006 Sum_probs=67.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++++|++-. .+| ..+|++.+...+...... .++.++|++...++-.. .+...+++.+..|+.++..+
T Consensus 189 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 189 PDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW----SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh----hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 567777643 233 468898887766544332 46688898877765432 24456778899999888775
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
..+...+...+++.++.++...+.....+
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 56788888999999999988877666544
No 161
>PRK06188 acyl-CoA synthetase; Validated
Probab=59.62 E-value=87 Score=31.62 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=69.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV 128 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 128 (473)
++++|++.. .+| ..+|+..+...+.... .. .++..++++...++-+......+++.+..|+..+..+ .
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~ 241 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQL---AE-WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-K 241 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-C
Confidence 445666543 222 3578888776554333 23 6778899998888777666666778888899888775 4
Q ss_pred CCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 129 NTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 129 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
.++..+...+++.++.++...+.....+.
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~ 270 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPTMIYALL 270 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHHHHHHHH
Confidence 67888999999999999998777665543
No 162
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=59.62 E-value=14 Score=25.99 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=35.7
Q ss_pred HHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEe
Q 012015 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (473)
Q Consensus 83 a~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 123 (473)
.++|.+..|++.|+.++.+.....|....+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 46788878999999999999999999999999999986543
No 163
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=59.55 E-value=89 Score=33.22 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=64.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCC--CCcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .|| ..+|++.+...+..+.. . .++.++|++...+|- ...+...+++.+..|+.++..+
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 567776542 233 46899888776655443 2 577899998887764 3445556788899999888766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVH 154 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (473)
.......+...+++.++.++...+....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 467 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLG 467 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHH
Confidence 4455566677788888888776655443
No 164
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=57.79 E-value=97 Score=30.79 Aligned_cols=97 Identities=15% Similarity=0.102 Sum_probs=67.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 127 (473)
+++++++.. .+| ..+|++.+...+... ... .++.++|++...+|-... .+..+++.+..|+.++..+
T Consensus 140 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~---~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 140 LDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGS---ALN-LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHH---HHh-cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 566766542 233 358888776543322 223 588999999988764322 2334577778899888665
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..++..+...+++.++.++...+.....+.
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 577899999999999999999887776554
No 165
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=57.56 E-value=28 Score=33.33 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=44.4
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHhhcCCeEEEE
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~ii~ 148 (473)
..+--.|.. +|+++||.|++- ..-+....-|+..+|+.+|.+|- ..+++.++..+..-. ++|+.
T Consensus 51 ~Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 51 SALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 444455666 899999998875 56677888999999999998764 357788888876444 55554
No 166
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=57.14 E-value=94 Score=31.21 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=67.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .+| ..+|++.+...+... .....+++++|++...++-.. .+...+++.+..|+..+..+
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELY---ARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHH---hHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 566776543 222 468888887655432 223368899999877766443 23345667788899888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (473)
...+...+...+++.++.++...+.....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 77788899999999999999988765543
No 167
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.08 E-value=56 Score=31.53 Aligned_cols=62 Identities=13% Similarity=-0.008 Sum_probs=41.1
Q ss_pred HHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 012015 82 LASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 82 la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (473)
+...+.. +++++||.|.+- ++.+.....++...|+.+++++.+ .+.+.+...+.. +.++|+.
T Consensus 59 L~~~l~a-l~~~pGd~Viv~---~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 59 LEMAALL-LDIQPGDEVIMP---SYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHHHH-cCCCCcCEEEEC---CCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3333444 578999998763 345666677778889988877543 456777776653 5666664
No 168
>PRK07638 acyl-CoA synthetase; Validated
Probab=54.48 E-value=1.3e+02 Score=30.07 Aligned_cols=85 Identities=8% Similarity=0.123 Sum_probs=62.1
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (473)
..+|.+.+...+...+ .. .+++++|++....+-... ++...+..+..|+..+.. +..++..+...+++.++.++
T Consensus 161 v~~s~~~~~~~~~~~~---~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEecHHHHHHHHHHH---Hh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 4678887766554433 33 677899999876654432 345566778889988855 56788899999999999999
Q ss_pred EEccchHHHHh
Q 012015 147 FATSSVVHKLA 157 (473)
Q Consensus 147 i~~~~~~~~~~ 157 (473)
...+.....+.
T Consensus 236 ~~~P~~~~~l~ 246 (487)
T PRK07638 236 YTVPTMLESLY 246 (487)
T ss_pred EeCcHHHHHHH
Confidence 99888776665
No 169
>PRK07470 acyl-CoA synthetase; Validated
Probab=54.44 E-value=1.2e+02 Score=30.61 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=63.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecC-CC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA-NP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~ 127 (473)
++.+|++.. .+| ..+|++.+...+......+. .+..++|++...++-+..+-...+..+..|+..+.+ ..
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 566776643 233 46888888654433222221 256788888888776544333334445556655544 34
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..+++.+...+++.++.++...+.....+.
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 678889999999999999999888776553
No 170
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.50 E-value=1.3e+02 Score=30.98 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=65.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH-HHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~ 127 (473)
++.++++.. .+| ..+|++.+...+..+. .... .++.+++++...+|-...+ ....++.+..|+..+...+
T Consensus 180 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 180 ETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDS-LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred ccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhh-cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 566666542 233 4678888765443332 1223 6788899988877654332 2345777888988877666
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHH
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHK 155 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (473)
..++..+...+++.++.++...+.....
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 285 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQ 285 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHH
Confidence 7788999999999999999887765543
No 171
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=53.42 E-value=1e+02 Score=30.59 Aligned_cols=48 Identities=8% Similarity=-0.129 Sum_probs=34.1
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHH-HHHhCCeEe--------------cCCCCCCHHHHHHHHhhcC
Q 012015 90 TRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIIS--------------PANPVNTESEISRQIQLSN 142 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v--------------~l~~~~~~~~l~~~l~~~~ 142 (473)
.++++||.| .+..++...-| +...|++++ |...+++.+.++..++...
T Consensus 112 l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 112 IAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred hCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 688999965 44555555555 788888777 3344678899999887543
No 172
>PLN02614 long-chain acyl-CoA synthetase
Probab=53.03 E-value=88 Score=32.93 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=67.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHH-hcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~-~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 125 (473)
|+.+|++-. .|| ..+|++.+...+..+...+.. ..++.++|++..++|-. .+.. ..+.++..|+.++..
T Consensus 222 ~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~ 300 (666)
T PLN02614 222 KSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFW 300 (666)
T ss_pred CCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEe
Confidence 677776542 233 568999988776665544421 02567889988887754 3333 345567788887765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. .++..+...++..++.+++.-+.....+.
T Consensus 301 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 330 (666)
T PLN02614 301 R--GDVKLLIEDLGELKPTIFCAVPRVLDRVY 330 (666)
T ss_pred C--CCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 3 46788899999999999998887766543
No 173
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=53.00 E-value=1.2e+02 Score=31.64 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=66.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH--HHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI--PILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~ 126 (473)
+++++++-. .|| ..+|.+.+.. .++..+....+++++|++....+-+... ...+++.+..|+..+..+
T Consensus 231 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~ 307 (628)
T TIGR02316 231 SNEPSYILYTSGTTGKPKGVQRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYE 307 (628)
T ss_pred CCCcEEEEECCCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeC
Confidence 566776542 233 3466665532 2233333336788999887776655432 455788899999888665
Q ss_pred C---CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 P---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. ..++..+..++++.++.++.+.+.....+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 341 (628)
T TIGR02316 308 GLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLK 341 (628)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 3 335788889999999999999887776554
No 174
>PRK07529 AMP-binding domain protein; Validated
Probab=52.28 E-value=1.2e+02 Score=31.79 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=66.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
+|.+|++.. .|| ..+|++.+...+..++.. .++.++|++...+|-. ...+..+++.+..|+.++...
T Consensus 212 ~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 212 PDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALL----LGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred cCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHh----cCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 577776653 223 468888887665444432 5668899988777643 244556788899999888765
Q ss_pred CC-C-C---HHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PV-N-T---ESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~-~-~---~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
+. + + ...+..++++.++.+++..+.....+.
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 323 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALL 323 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 42 2 1 246667889999999998887766554
No 175
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=52.24 E-value=1.5e+02 Score=30.21 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=67.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .|| ..+|+..+...+.... .. .++++++++....+-.. .++..+++.+..|+..+..+
T Consensus 196 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 196 PDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ER-LGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HH-hCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 567776542 233 3678888766555433 33 67788999888776543 24556788889999887654
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..+.+.+...+++.++..++..+.....+.
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 567888999999999998887766655443
No 176
>PLN02565 cysteine synthase
Probab=51.87 E-value=1.2e+02 Score=28.61 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=61.4
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcC-CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 012015 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (473)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 136 (473)
++.+-....+-+=||++= -+..+-..+.+ .| +.+|....+....+..-+..-+++..+|..++.+-|...+.....
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~-~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 107 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEE-KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRI 107 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHH-cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHH
Confidence 444444322344455542 22333333334 35 478866666777788888888899999998887777777778888
Q ss_pred HHhhcCCeEEEEccc
Q 012015 137 QIQLSNPVIAFATSS 151 (473)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (473)
.++..+++++++++.
T Consensus 108 ~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 108 ILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHcCCEEEEeCCC
Confidence 999999999998763
No 177
>PLN02736 long-chain acyl-CoA synthetase
Probab=51.04 E-value=1.4e+02 Score=31.38 Aligned_cols=100 Identities=11% Similarity=-0.009 Sum_probs=69.8
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++...++-.--+ +...++++..|+.++.+. .+.++.+...+++.+++.++.
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 368887776665544433 2678889888777754322 255678888899988764 578899999999999999999
Q ss_pred cHHHHHHHhcCCCCCCCCCCCceEEEec
Q 012015 288 TPPIVVAMSKGGSTDGYDLSSLETVACG 315 (473)
Q Consensus 288 ~P~~~~~l~~~~~~~~~~l~~lr~v~~~ 315 (473)
.+..+..+..... .++.++.++..
T Consensus 157 ~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 157 VPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CHHHHHHHHHHhh----cCCCceEEEEE
Confidence 9887766654321 23456665543
No 178
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=50.89 E-value=78 Score=30.49 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=38.1
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 012015 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (473)
.++++||.|.+-. +.+.....++...|+.++.++.+ .+.+.++..+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~---~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 5678999987744 44556667778889988777532 567788877754 5666653
No 179
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=50.42 E-value=1.7e+02 Score=29.12 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=38.9
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC---CCCHHHHHHHHhhcCCeEEEEccc
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
.+||+|++=- +-+.-+.-+.-..|+.+++++. .+.++.++..++..+++++.+.+.
T Consensus 177 ~pGd~v~vE~---PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 177 DPGDTVLVED---PTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCEEEEcC---CCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 5788877643 3444455555555666655543 678899999999989999998765
No 180
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=50.12 E-value=44 Score=26.81 Aligned_cols=41 Identities=5% Similarity=0.046 Sum_probs=32.6
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCC---CCcHHHHHHHHHHhCCe
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTN---SIEIPILYFSLLSLGVI 121 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~---~~~~~~~~lA~~~~G~~ 121 (473)
+.+++.|.+ +|+.+++.|.+++.. +.....+++.+-.+|..
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 567788888 899999999999965 56666777777888854
No 181
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=49.13 E-value=1.5e+02 Score=31.10 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=64.5
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHH-HHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTR-RTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~-~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 127 (473)
++.+|++- +.|| ..+|.+.+.. .....+ ...+++++|++....+.+......+++.+..|+..+..+.
T Consensus 262 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELG----LHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHH----HhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 46666553 2233 3577765532 222222 2257789999887766665544456788999999887653
Q ss_pred ---CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 ---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..++..+..++++.++.++.+.+.....+.
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 246788889999999999888777665553
No 182
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.85 E-value=1.7e+02 Score=29.70 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=72.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCC--CCcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .|| ..+|++.+...+..+...+.. .+++.|++...+|- ..-+...+++.+..|+..+...
T Consensus 170 ~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~--~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 170 PDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG--GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc--cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 677777642 222 468999999887777776653 26888886666653 4566677888889999988877
Q ss_pred C-CCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 P-VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+ .++++.+...+.+.++..+...+.....+
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~l 278 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLREL 278 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHH
Confidence 5 68898888888888877777666655543
No 183
>PRK07787 acyl-CoA synthetase; Validated
Probab=48.80 E-value=1.7e+02 Score=29.00 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=66.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCC--CCcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .+| ..+|+..+...+..++.. +++.++|++...++- ...++..+++.+..|+.++...
T Consensus 127 ~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 127 PDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA----WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh----cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 566766542 223 367998887766555432 567888987666543 3345667889999999988765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..++..+...++ .++..+...+.....+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 467888888888 88888887776665443
No 184
>PLN03052 acetate--CoA ligase; Provisional
Probab=48.33 E-value=1.1e+02 Score=32.61 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=63.5
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 127 (473)
++.++++- +.|| ..+|.+.+...+ ...... .+++++|++....+-+.. ....+++.+..|+..+..+.
T Consensus 355 ~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~---~~~~~~-~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g 430 (728)
T PLN03052 355 VEAFTNILFSSGTTGEPKAIPWTQLTPLRAA---ADAWAH-LDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNG 430 (728)
T ss_pred CCCcEEEEecCCCCCCCceEEECchHHHHHH---HHHHHh-cCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCC
Confidence 46666553 2233 356776553332 222233 688999988766554432 22345688999999987765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
......+..++++.++.++.+.+..+..+.
T Consensus 431 ~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~ 460 (728)
T PLN03052 431 SPLGRGFAKFVQDAKVTMLGTVPSIVKTWK 460 (728)
T ss_pred CCCCChHHHHHHHHCCCEEEECHHHHHHHH
Confidence 444456888999999999998887776654
No 185
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=48.09 E-value=1.3e+02 Score=34.07 Aligned_cols=98 Identities=12% Similarity=0.123 Sum_probs=69.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
+|.+|++-. .|| ..+|.+.+...+..... . .++.++|++...+|-. ..+...+++.+..|+..+...
T Consensus 781 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 781 PDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---V-FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---h-cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 677877643 223 46888888776665443 2 5678899887766532 333444677788898888776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
...+.+.+.+.+++.++.++...+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6678889999999999999998887766543
No 186
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=47.68 E-value=72 Score=32.19 Aligned_cols=78 Identities=12% Similarity=-0.029 Sum_probs=61.3
Q ss_pred HHHHHHHHHhHHhcCCCCCCEEEEEeC--CCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHH
Q 012015 77 RRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH 154 (473)
Q Consensus 77 ~~~~~la~~L~~~~g~~~gd~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (473)
.|.-+.|..+...+|+++.|+|-+.+| ++...++.+-+|+..|+++| |...+++..+-.-..+.++.++-.--+...
T Consensus 265 ~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIGElcR 343 (649)
T KOG1179|consen 265 LRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIGELCR 343 (649)
T ss_pred HHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHHHHHH
Confidence 445555664433478999999999876 67888899999999999987 778999999999999999998876555444
Q ss_pred H
Q 012015 155 K 155 (473)
Q Consensus 155 ~ 155 (473)
-
T Consensus 344 Y 344 (649)
T KOG1179|consen 344 Y 344 (649)
T ss_pred H
Confidence 3
No 187
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=47.41 E-value=1.8e+02 Score=29.35 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=66.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH--HH-HHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI--PI-LYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~--~~-~~lA~~~~G~~~v~l 125 (473)
++++|++-. .+| ..+|...+...+..... . .++.++|++...+|....+ .. ..++++..|+..+..
T Consensus 182 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 182 SDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---h-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 677777542 233 46888888766555332 3 6778899988877654322 22 367788889887754
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+...+..+...+++.++.++...+.....+
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 455677788889999999999887776544
No 188
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=46.78 E-value=1.9e+02 Score=26.12 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=45.9
Q ss_pred HHHHHH-HHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHh------C--CeEecCCCC---CCHHHHHHHHh
Q 012015 72 FSEFTR-RTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL------G--VIISPANPV---NTESEISRQIQ 139 (473)
Q Consensus 72 y~el~~-~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~l~~~l~ 139 (473)
+..+.+ ..+++.+.+.+..-+.+|++|+|.+.=+.+..+.+..+... | ..++-++.. ++.+.+..+.+
T Consensus 5 ~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~ 84 (258)
T PRK10696 5 FNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLE 84 (258)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHH
Confidence 334433 34555566666234578999999999999998887766443 2 234445543 23344455555
Q ss_pred hcCCeEEEE
Q 012015 140 LSNPVIAFA 148 (473)
Q Consensus 140 ~~~~~~ii~ 148 (473)
..+..+.+.
T Consensus 85 ~lgI~~~v~ 93 (258)
T PRK10696 85 SLGVPYHIE 93 (258)
T ss_pred HhCCCEEEE
Confidence 555555443
No 189
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=46.24 E-value=1.6e+02 Score=27.21 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=45.5
Q ss_pred cC-CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc
Q 012015 90 TR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 90 ~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
.| +.+|++| +....+..-...-+++.+.|..+..+-|...+......++..++++++++..
T Consensus 51 ~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 51 RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 35 4677776 5666777777778888889987766666555455677889999999998764
No 190
>PRK06839 acyl-CoA synthetase; Validated
Probab=46.06 E-value=2.9e+02 Score=27.45 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=65.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc--HHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 126 (473)
++++|++.. .+| ..+|++.+...+.. .... .++.++|++...+|-... +....++.+..|+..+. .
T Consensus 148 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~---~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~ 222 (496)
T PRK06839 148 ESASFIICYTSGTTGKPKGAVLTQENMFWNALN---NTFA-IDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-P 222 (496)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHH---HHHH-cCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-c
Confidence 567776542 223 35788887543332 2334 678899998887765432 22344677888887664 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
...+++.+...+++.++.++...+.....+.
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 253 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQALI 253 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHHH
Confidence 5678888899999999999998877766554
No 191
>PLN02574 4-coumarate--CoA ligase-like
Probab=45.92 E-value=2.2e+02 Score=29.11 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=64.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEE-eCCC--CcHHHHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVL-STNS--IEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~-~~~~--~~~~~~~lA~~~~G~~~v~l 125 (473)
++.+|++.. .|| ..+|++.+...+..+........+...++.+.+. +|-. ..+...+++.+..|+..+..
T Consensus 197 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 276 (560)
T PLN02574 197 QDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVM 276 (560)
T ss_pred cCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEe
Confidence 566776543 233 4689999888777666544332333334444443 3321 12223455677789888866
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
+ ..+++.+...+++.++.++...+.....+.
T Consensus 277 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 307 (560)
T PLN02574 277 R-RFDASDMVKVIDRFKVTHFPVVPPILMALT 307 (560)
T ss_pred c-CCCHHHHHHHHHHcCCeEEecCCHHHHHHH
Confidence 4 578899999999999999988887766554
No 192
>PRK06164 acyl-CoA synthetase; Validated
Probab=45.30 E-value=1.6e+02 Score=29.89 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=69.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 127 (473)
++.++++.. .+| ..+|.+.+...+..++.. +++.+++++...+|-+. -.+..+++.+..|+.++.. +
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 566777652 223 468888887766655544 46678999988876542 2234578888889888765 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
......+...+++.++.+++..+..+..+.
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 677888899999999999998887766553
No 193
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=45.10 E-value=1.3e+02 Score=31.56 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=67.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHH-hcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~-~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 125 (473)
+|.+|++-. .|| ..+|.+.+...+..+...+.. ...+.++|++..++|-. .+... .+.++..|+.++..
T Consensus 219 ~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~ 297 (660)
T PLN02861 219 KTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFW 297 (660)
T ss_pred CCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEe
Confidence 677776542 233 468999988777666554421 02356788888877643 34333 34467889887765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. .++..+...++..++.+++..+.....+.
T Consensus 298 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 327 (660)
T PLN02861 298 Q--GDIRYLMEDVQALKPTIFCGVPRVYDRIY 327 (660)
T ss_pred C--CCHHHHHHHHHHhCCcEEeechHHHHHHH
Confidence 3 46788889999999999998887776553
No 194
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=44.81 E-value=1.7e+02 Score=30.42 Aligned_cols=97 Identities=12% Similarity=0.150 Sum_probs=68.6
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH-HHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY-FSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~-lA~~~~G~~~v~l~~ 127 (473)
||.+|.+- +.|| .-+||+-|...+..+...+. -++++|++..++|-.--+=-++ .++...|.+.+. .
T Consensus 190 ~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~--~ 264 (613)
T COG1022 190 PDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL--F 264 (613)
T ss_pred ccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE--e
Confidence 88887653 2233 57999999999998887764 2689999999998654333332 444444444332 3
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
..+...+..-+...+|.+++.-+...+.+.
T Consensus 265 ~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 265 KEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred cCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 456788899999999999999888777654
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=43.13 E-value=1.9e+02 Score=32.80 Aligned_cols=97 Identities=19% Similarity=0.103 Sum_probs=67.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .|| ..+|.+.+...+...+.. .+++++|++...+|-. ..+...++..+..|+..+..+
T Consensus 792 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 792 PDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR----IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh----hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 677776542 233 468999887666655533 5678899988877643 233355677788898888776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
.......+...+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 556667777888999999988877666544
No 196
>PRK13388 acyl-CoA synthetase; Provisional
Probab=42.89 E-value=2.9e+02 Score=28.05 Aligned_cols=95 Identities=11% Similarity=0.063 Sum_probs=62.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .+| ..+|+..+...+..+.. . .+++++|++...++-.. .+...+++.+..|+..+. .
T Consensus 149 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 149 AMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE---R-FGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH---H-hCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 677776542 233 36888888665544432 3 57789999887775432 233445567778887764 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (473)
+..++..+...+++.++.++...+.....
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l~~ 252 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPLAY 252 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHH
Confidence 56778888889999999988765544433
No 197
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=42.78 E-value=2.1e+02 Score=30.63 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=69.1
Q ss_pred hhcHHHHHHHHHHhhccCC-----CCCCC-----------cEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHH
Q 012015 211 MLTHRNLTAAVASSFASSP-----KRVSP-----------AVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMM 273 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~~-----~~~~~-----------~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~ 273 (473)
.+|.+.+...+..+...+. +..++ +++...++-.. -.+...++++..|+..+.+. .+.++.+
T Consensus 91 ~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~lA~~~~Gav~Vpl~~~~~~~el 169 (746)
T PTZ00342 91 YITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADLACMLSGVTTLVMHSKFSIDVI 169 (746)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHHH
Confidence 4677777665555444331 45555 66776665432 22356788889999988874 5789999
Q ss_pred HHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012015 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (473)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G 316 (473)
...+++-++.+++..+..+..+.+... .++.++.++.-+
T Consensus 170 ~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 170 VDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 999999999999998887777765321 245677666543
No 198
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=42.48 E-value=2.4e+02 Score=26.09 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=44.3
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
+.+|+.| +....+..-..+-+++.+.|..+..+-|...+......++..++++++++..
T Consensus 55 ~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 55 LKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3677766 4666777888888888899987766656555556667889999999998754
No 199
>PRK11761 cysM cysteine synthase B; Provisional
Probab=41.99 E-value=2.6e+02 Score=25.92 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=57.4
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcC-CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 012015 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (473)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 136 (473)
++.+-....+.+=|+++ +-+..+...+.+ .| +.+|++|.. ...+..-...-++|...|..+..+-|...+.....
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 34444443334445554 223333333444 35 467777654 56777788888889999987766656555567778
Q ss_pred HHhhcCCeEEEEcc
Q 012015 137 QIQLSNPVIAFATS 150 (473)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (473)
.++..++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 88999999999985
No 200
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=41.74 E-value=2.7e+02 Score=26.97 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=50.1
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (473)
..+|++.+...+..++..+.- ...+.+++..++|-.. .+...++..+.+|+.++... ..++..+...++.. .+
T Consensus 113 V~~sh~~l~~~~~~~~~~~~~--~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~ 187 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKILGE--RPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DL 187 (386)
T ss_pred eEeeHHHHHHHHHHHHHHhCc--CCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CE
Confidence 568999998888777765421 1233456766666542 23344566677898887665 45555544444322 45
Q ss_pred EEEccchHHHH
Q 012015 146 AFATSSVVHKL 156 (473)
Q Consensus 146 ii~~~~~~~~~ 156 (473)
++..+.....+
T Consensus 188 ~~~~P~~l~~l 198 (386)
T TIGR02372 188 IVGTPFIWEQL 198 (386)
T ss_pred EEECcHHHHHH
Confidence 66666555544
No 201
>PLN03013 cysteine synthase
Probab=40.97 E-value=1.8e+02 Score=28.61 Aligned_cols=61 Identities=15% Similarity=0.063 Sum_probs=48.7
Q ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc
Q 012015 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 91 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
.+++|....+....+..-+..-+++...|..++.+-|...+.+....++..++++++++..
T Consensus 170 ~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 170 FISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred CcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 3578866667777888888888899999987777666666777788899999999998754
No 202
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=39.92 E-value=2.4e+02 Score=28.63 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=66.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH---HHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP---ILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l 125 (473)
++.+|++-. .|| ..+|.+.+...+..... . .++.++|++...+|-...+- ...++++..|+..+..
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---h-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 567776532 223 46899998876665433 3 57789999888776543322 2468888999988765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+..+...+...+++.++.++...+.....+
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 445677777889999999988877666544
No 203
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=39.79 E-value=3.3e+02 Score=27.07 Aligned_cols=84 Identities=14% Similarity=0.096 Sum_probs=60.1
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC-cHHHHHHHHHHhCCeEecCCCC--CCHHHHHHHHhhcCCe
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANPV--NTESEISRQIQLSNPV 144 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~ 144 (473)
-.+|++.+...+..+.. . .++..++++....+... ..+..+++++..|+..+..++. .+...+...+...++.
T Consensus 159 v~~s~~~~~~~~~~~~~---~-~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---D-FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLN 234 (502)
T ss_pred EEEecHHHHHHHHHHHH---h-CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCe
Confidence 46888888766554333 2 57788888877665543 2345677889999999887754 4567788888899998
Q ss_pred EEEEccchHHH
Q 012015 145 IAFATSSVVHK 155 (473)
Q Consensus 145 ~ii~~~~~~~~ 155 (473)
.+...+...+.
T Consensus 235 ~~~~~p~~~~~ 245 (502)
T TIGR01734 235 VWVSTPSFVDM 245 (502)
T ss_pred EEEEChhHHHH
Confidence 88887766543
No 204
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=39.79 E-value=1.8e+02 Score=27.96 Aligned_cols=60 Identities=13% Similarity=0.055 Sum_probs=48.1
Q ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 91 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
-+++|....+....+..-+..-++|...|..+..+-|...+......++..++++++++.
T Consensus 106 ~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 106 LITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred CcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 367786555667788888888889999999777776766667778899999999999874
No 205
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=39.72 E-value=2.3e+02 Score=32.69 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=67.9
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH-HHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP-ILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~ 127 (473)
|+.+|++- +.|| ..+|.+.+...+.... +..++.++|++....+-+.+.- .-+++.+..|+..+..++
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ----NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH----HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 66777654 2333 4688887766544333 3368899999998887765543 346778889999887665
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEccchHHH
Q 012015 128 --VNTESEISRQIQLSNPVIAFATSSVVHK 155 (473)
Q Consensus 128 --~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (473)
..++..+...+++.++.++...+.....
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~ 702 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAA 702 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHH
Confidence 3577889999999999998877765543
No 206
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=39.55 E-value=65 Score=17.44 Aligned_cols=19 Identities=21% Similarity=0.525 Sum_probs=15.2
Q ss_pred EccCCcEEEEeccCCeEEE
Q 012015 428 IDEDGFLFIVDRLKDLIKY 446 (473)
Q Consensus 428 ~~~~g~l~~~GR~~d~i~~ 446 (473)
.+++|.+|+..+....|+.
T Consensus 9 v~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EETTSEEEEEECCCTEEEE
T ss_pred EeCCCCEEEEECCCCEEEE
Confidence 4589999999988887764
No 207
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=38.88 E-value=2.6e+02 Score=29.60 Aligned_cols=101 Identities=11% Similarity=-0.030 Sum_probs=69.7
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++...++-..- .+...++++..|+..+.+. .+.++.+...+++.++++++.
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~ 184 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVIC 184 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEE
Confidence 467777766555544432 267788888877765432 2356678888999988775 578899999999999999999
Q ss_pred cHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012015 288 TPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (473)
Q Consensus 288 ~P~~~~~l~~~~~~~~~~l~~lr~v~~~G 316 (473)
....+..+..... .+++++.+++-+
T Consensus 185 ~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 185 DSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred CHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 8877776655321 234566665544
No 208
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=38.81 E-value=1.2e+02 Score=30.89 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=72.5
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH--HHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI--PILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~ 126 (473)
.+.++++- +.|| ...|.+.+.-.....+.+.. .+++||++--..+.++-. ...+++-+.+|+..+..+
T Consensus 170 ~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~---~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~e 246 (528)
T COG0365 170 ADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG---DLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYD 246 (528)
T ss_pred CCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh---CCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeC
Confidence 55666543 2233 35677777666666665543 446899887777666533 344599999999998664
Q ss_pred C--CCCHHHHHHHHhhcCCeEEEEccchHHHHhcCC
Q 012015 127 P--VNTESEISRQIQLSNPVIAFATSSVVHKLAKLK 160 (473)
Q Consensus 127 ~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 160 (473)
. .++++.+..++++.++.++.+.+.....+.+.+
T Consensus 247 g~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g 282 (528)
T COG0365 247 GRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLG 282 (528)
T ss_pred CCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcC
Confidence 3 335899999999999999999998887776544
No 209
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=38.75 E-value=2.2e+02 Score=28.12 Aligned_cols=56 Identities=9% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHH----HHHHHHhhcCCeEEEEcc
Q 012015 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTES----EISRQIQLSNPVIAFATS 150 (473)
Q Consensus 94 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~----~l~~~l~~~~~~~ii~~~ 150 (473)
.|.+|+|..+.+..+-++-+- ..+|..++.+....... .++.++.......++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L-~elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFV-LENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHH-HHCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 577888887543222222222 26788765554444333 333445555556665553
No 210
>PRK07788 acyl-CoA synthetase; Validated
Probab=37.99 E-value=2e+02 Score=29.25 Aligned_cols=84 Identities=7% Similarity=-0.043 Sum_probs=61.1
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC-CCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++...++-.- ..+..+++++..|+..+.++. ...+.+...+++.+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 478887766655544433 25677888887765542 233567888999999988864 67889999999999999988
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87665554
No 211
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=37.93 E-value=2.2e+02 Score=28.96 Aligned_cols=85 Identities=12% Similarity=-0.007 Sum_probs=62.6
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++....|-...+ +..++..+..|+..+.+. ....+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 577777766665554433 2577788888777665433 466788899999988875 468899999999999999998
Q ss_pred cHHHHHHHh
Q 012015 288 TPPIVVAMS 296 (473)
Q Consensus 288 ~P~~~~~l~ 296 (473)
.......+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 877665543
No 212
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=37.71 E-value=1.3e+02 Score=20.35 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=19.2
Q ss_pred CCCeeecCceEEEccCCcEEEEe
Q 012015 416 PDGWMRTGDLCYIDEDGFLFIVD 438 (473)
Q Consensus 416 ~~~~~~TgD~~~~~~~g~l~~~G 438 (473)
.|-|+..||...+...+.+++-+
T Consensus 36 ~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 36 DDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred CCEEECCCCEEEeCCCCEEEEEe
Confidence 57799999999998888887765
No 213
>PLN03102 acyl-activating enzyme; Provisional
Probab=37.63 E-value=1.6e+02 Score=30.22 Aligned_cols=81 Identities=11% Similarity=-0.032 Sum_probs=59.3
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++...+|-.- .....+++.+..|+.++.+. .+..+.+...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 478888776665544433 26778898888877543 22356778888898888775 478899999999999999988
Q ss_pred cHHHH
Q 012015 288 TPPIV 292 (473)
Q Consensus 288 ~P~~~ 292 (473)
.+...
T Consensus 118 ~~~~~ 122 (579)
T PLN03102 118 DRSFE 122 (579)
T ss_pred ChhhH
Confidence 76544
No 214
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=37.56 E-value=1e+02 Score=26.17 Aligned_cols=47 Identities=9% Similarity=-0.066 Sum_probs=35.2
Q ss_pred CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHH
Q 012015 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (473)
Q Consensus 67 ~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 115 (473)
..-+||.|+.+.+.++|..+.+.++ ..+.+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~--~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLA--DENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcC--CCCeEEEEECCCcHHHHHHHHH
Confidence 5678999999999999999998433 2234666677777777777664
No 215
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=37.56 E-value=2.7e+02 Score=32.46 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=66.3
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 127 (473)
|+.+|++- +.|| ..+|.+.+...+..+. +.+++.++|++..+++-+.+ .+..+++.+..|+.++..+.
T Consensus 414 ~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~ 489 (1389)
T TIGR03443 414 PDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMA----KRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTA 489 (1389)
T ss_pred CCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHH----HhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcCh
Confidence 66777653 2333 4688888876654443 33678899998877654432 33457888899998776544
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 128 V--NTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 128 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
. .++..+...+++.++.++...+.....+
T Consensus 490 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 490 DDIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred hhccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 3 3567888999999999998877665544
No 216
>PRK09274 peptide synthase; Provisional
Probab=37.10 E-value=2.7e+02 Score=28.23 Aligned_cols=79 Identities=10% Similarity=-0.022 Sum_probs=56.9
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+......+ .+..+++++...++-... .+...+.++..|+..+.+. ....+.+...+++.++..++
T Consensus 40 ~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i 118 (552)
T PRK09274 40 DELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFI 118 (552)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEE
Confidence 3678888876665544433 267788988888775432 2356788889999888875 46778888889999998887
Q ss_pred ecH
Q 012015 287 VTP 289 (473)
Q Consensus 287 ~~P 289 (473)
..+
T Consensus 119 ~~~ 121 (552)
T PRK09274 119 GIP 121 (552)
T ss_pred ecc
Confidence 754
No 217
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=36.14 E-value=1.5e+02 Score=28.60 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=40.8
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHhhcCCeEEE
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAF 147 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 147 (473)
..+...|.. +++++||.|.+.. ..+.....++...|+.++.++.+ .+.+.++..+.. +.++|+
T Consensus 59 ~al~lal~a-l~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMA-LGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHH-cCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 334445555 6788999877643 34555556777889988776532 467788777753 566665
No 218
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=35.98 E-value=1.6e+02 Score=29.08 Aligned_cols=56 Identities=9% Similarity=0.105 Sum_probs=37.5
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 012015 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 149 (473)
.++++||.|.+-. ..+.....++...|+.+++++.+ .+.+.++..+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999987654 44566667777889988776542 466777776643 55666653
No 219
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=35.51 E-value=2.4e+02 Score=25.55 Aligned_cols=72 Identities=18% Similarity=0.081 Sum_probs=50.8
Q ss_pred CCEEEEEeCCCCcHHHHHHHHHHhCCe---EecCCCCCCHHHHHHHHhhcCCeEEEEccc-----hHHH---HhcCCCeE
Q 012015 95 NDTAFVLSTNSIEIPILYFSLLSLGVI---ISPANPVNTESEISRQIQLSNPVIAFATSS-----VVHK---LAKLKHRT 163 (473)
Q Consensus 95 gd~V~i~~~~~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~---~~~~~~~~ 163 (473)
+.++.+-.-+..+.+. .|.++|.. ++.+.+.++.+.-..++++.+++++++-++ ..++ ..+.+.++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 4556554444444444 67777764 778888899888899999999999999654 2233 33668888
Q ss_pred EEEcCC
Q 012015 164 ILIDSP 169 (473)
Q Consensus 164 ~~~~~~ 169 (473)
++++-+
T Consensus 227 ivI~RP 232 (256)
T TIGR00715 227 IRIARP 232 (256)
T ss_pred EEEeCC
Confidence 887644
No 220
>PRK05852 acyl-CoA synthetase; Validated
Probab=35.50 E-value=4.5e+02 Score=26.53 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=61.0
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEec-CCCCCCHHHHHHHHhhcCCe
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISP-ANPVNTESEISRQIQLSNPV 144 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~ 144 (473)
..+|+..+...+..+... ++++++|++....+-.. .+...+++++..|...+. -....++..+...+++.++.
T Consensus 194 v~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t 269 (534)
T PRK05852 194 VPWTHANIASSVRAIITG----YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGAT 269 (534)
T ss_pred EEecHHHHHHHHHHHHHH----hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCc
Confidence 457888887666655532 56788998887766443 455667788888776553 33456788888899999999
Q ss_pred EEEEccchHHHHh
Q 012015 145 IAFATSSVVHKLA 157 (473)
Q Consensus 145 ~ii~~~~~~~~~~ 157 (473)
.++..+.....+.
T Consensus 270 ~~~~~P~~~~~l~ 282 (534)
T PRK05852 270 WYTAVPTIHQILL 282 (534)
T ss_pred EEEcChHHHHHHH
Confidence 9988887766554
No 221
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=35.22 E-value=1.8e+02 Score=30.55 Aligned_cols=79 Identities=16% Similarity=0.090 Sum_probs=60.2
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+..+...+ .+..++|++...+|..-- .+..++++...|+..+.+. .+..+.+...+++.++++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 3578888876665544433 378899999999887643 2356788889999887774 58899999999999999988
Q ss_pred ecH
Q 012015 287 VTP 289 (473)
Q Consensus 287 ~~P 289 (473)
...
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 754
No 222
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=35.17 E-value=1.3e+02 Score=21.39 Aligned_cols=16 Identities=13% Similarity=0.327 Sum_probs=12.8
Q ss_pred CccccCCCcEEEEEcC
Q 012015 363 STGRLSAGLEAKIVDP 378 (473)
Q Consensus 363 ~~G~p~~~~~~~i~d~ 378 (473)
+-|+|++++++++.+.
T Consensus 6 C~~~P~~~~~V~L~e~ 21 (80)
T PF01060_consen 6 CGGKPAKNVKVKLWED 21 (80)
T ss_pred eCCccCCCCEEEEEEC
Confidence 3478889999999983
No 223
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=34.81 E-value=1.3e+02 Score=27.74 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeE-ecCCCCCCHHHHHHHHhhcCCeEEEEccchHH
Q 012015 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVII-SPANPVNTESEISRQIQLSNPVIAFATSSVVH 154 (473)
Q Consensus 91 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (473)
.+++||.|.-...||.---+.+-=|-..|.-- -.+..+-..+++...|+..+++.||++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 56889999988888866666655566667643 44566778899999999999999999887654
No 224
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=34.74 E-value=2.9e+02 Score=28.45 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=65.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .|| ..+|.+.+...+..+... .++.++|++...+|-.. .+...+++.+..|+..+. .
T Consensus 198 ~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~ 272 (600)
T PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL----LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-R 272 (600)
T ss_pred ccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh----cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-c
Confidence 456666542 233 468999888776665543 56789999988776543 344456667777877765 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+..+...+...+++.++.++...+.....+
T Consensus 273 ~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l 302 (600)
T PRK08279 273 RKFSASRFWDDVRRYRATAFQYIGELCRYL 302 (600)
T ss_pred CCCCHHHHHHHHHHhcceEEeehHHHHHHH
Confidence 567788888889999999988766655544
No 225
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=34.64 E-value=3.3e+02 Score=25.13 Aligned_cols=58 Identities=14% Similarity=0.058 Sum_probs=44.2
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
+.+|+.|.. ...+..-...-++|.+.|..+..+-|...+......++..++++++++.
T Consensus 56 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 56 IKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 467776654 5677778888888889998777666655556667789999999999875
No 226
>PLN02654 acetate-CoA ligase
Probab=34.64 E-value=2e+02 Score=30.23 Aligned_cols=99 Identities=8% Similarity=0.061 Sum_probs=64.9
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc--HHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 126 (473)
++.++++- +.|| ..+|.+.+... .+..+....+++++|++....+-+.- ....+++.+..|+.++..+
T Consensus 274 ~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~ 350 (666)
T PLN02654 274 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVY---TATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFE 350 (666)
T ss_pred CCCceEEEecCCCCCCCceEEecccHHHHH---HHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEEC
Confidence 56666654 2233 34566554321 12222333678999987777665532 2345678899999988776
Q ss_pred C--C-CCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 P--V-NTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~--~-~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. . ..+..+-.++++.++.++.+.+.....+.
T Consensus 351 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 384 (666)
T PLN02654 351 GAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLM 384 (666)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 4 2 35788899999999999999888776654
No 227
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=34.59 E-value=2e+02 Score=27.72 Aligned_cols=64 Identities=9% Similarity=0.048 Sum_probs=41.7
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHhh---cCCeEEE
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQL---SNPVIAF 147 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii 147 (473)
..+...+.. +++++||.|.+-.+ .+....-++...|+.++.++. ..+.+.++..++. -+.++|+
T Consensus 55 ~al~~~l~a-l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 55 SALHIACLA-LGVGPGDRVWTTPI---TFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHH-cCCCCCCEEEeCCc---chHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 344445555 67889999776543 345556677788987776543 2567888887763 3556665
No 228
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=34.47 E-value=82 Score=22.23 Aligned_cols=66 Identities=14% Similarity=0.231 Sum_probs=49.7
Q ss_pred ceecHHHHHHHHHHHH---HHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCe
Q 012015 68 LRVSFSEFTRRTNSLA---SYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPV 144 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la---~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 144 (473)
...||+||.+.-+.++ ..|.+ ..++..|.|+|+-=++... ..++.++...+.+++...+++.+++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k-~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~ 75 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAK-VDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAE 75 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcc-cccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCch
Confidence 3578999887766554 34555 6788899999987666543 2456788888999999999998886
Q ss_pred E
Q 012015 145 I 145 (473)
Q Consensus 145 ~ 145 (473)
+
T Consensus 76 i 76 (88)
T COG4009 76 I 76 (88)
T ss_pred h
Confidence 5
No 229
>PLN02409 serine--glyoxylate aminotransaminase
Probab=34.27 E-value=3.1e+02 Score=26.64 Aligned_cols=75 Identities=13% Similarity=-0.004 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHH-HHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 012015 74 EFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL-YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (473)
Q Consensus 74 el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (473)
++.+..+++...|.+..|...++.| ++..++...+.+ +..++..|-.++..++.........+++..+.+++.+.
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~v-i~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPF-IFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 4444555555555554555544433 443344443333 33344556555555555544444555666666655543
No 230
>PRK10717 cysteine synthase A; Provisional
Probab=33.90 E-value=2.7e+02 Score=26.22 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=44.2
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
+++|+.|.. ...+..-..+-+++.++|..+..+-|...+......++..++++++++.
T Consensus 61 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 61 LKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred CCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 466776544 6677888888888899998766665655566677889999999998875
No 231
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=33.79 E-value=3.8e+02 Score=27.12 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=65.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .+| ..+|++.+...+..... . .+++.+|++...++-.. .++..++..+..|+..+..
T Consensus 194 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 194 PDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE---R-LELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh---h-cCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 677776542 223 35788777665554432 2 56788998888876543 3455567778888876644
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+..++..+...+++.++.++...+.....+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 567888999999999999988776665544
No 232
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=33.74 E-value=72 Score=24.41 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=30.9
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCC
Q 012015 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGV 120 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 120 (473)
..+...+.. .++.+++.|.++|..+.....+...+..+|.
T Consensus 64 ~~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 345566666 7888899999999888777777777777785
No 233
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=33.67 E-value=2.8e+02 Score=26.35 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCC---------CCHHHHHHHHhhcCC
Q 012015 73 SEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV---------NTESEISRQIQLSNP 143 (473)
Q Consensus 73 ~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~~ 143 (473)
.++......++..|.+ . +| |.|.+ ..+..+.+++.+|+...+..++-+... ++.+..++.+.+..-
T Consensus 50 ~~~~~~~~~~~~~~~~-~--~P-d~Vlv-~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 50 KSTGLAIIELADVLER-E--KP-DAVLV-LGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHHH-H--T--SEEEE-ETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHHh-c--CC-CEEEE-EcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhh
Confidence 6677788888888887 3 44 55554 557889999999999999999988765 667778888877765
Q ss_pred eEEEEccchHHHHhcC---CCeEEEEcCCChhhhhcc
Q 012015 144 VIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMS 177 (473)
Q Consensus 144 ~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 177 (473)
-.....+...+++.+. ..++.+++++.++.+...
T Consensus 125 lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~ 161 (346)
T PF02350_consen 125 LHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQN 161 (346)
T ss_dssp EEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHH
T ss_pred hhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHh
Confidence 5555566666666644 346888888877776443
No 234
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=33.59 E-value=3.8e+02 Score=27.06 Aligned_cols=89 Identities=12% Similarity=0.007 Sum_probs=58.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCC-CCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLS-KNDTAFVLSTNSIE-IPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~-~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .|| ..+|++.+...+..+... +++. ++|++...+|-... .+..+++.+..|+..+..+
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR----VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH----hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 667777642 233 468999888776655433 4667 78888877765432 2235677888899887665
Q ss_pred C-CC--CHHHHHHHHhhcCCeEEEE
Q 012015 127 P-VN--TESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 127 ~-~~--~~~~l~~~l~~~~~~~ii~ 148 (473)
. .+ .+..+...+++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 12 4566778888888886644
No 235
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=33.29 E-value=95 Score=23.11 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=36.3
Q ss_pred eecHHHHHHH----HHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCe
Q 012015 69 RVSFSEFTRR----TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (473)
Q Consensus 69 ~~Ty~el~~~----~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 121 (473)
.+.+.++.+. .+.+...+.. .+..+++.|.++|.++.....+...+..+|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556665432 2355666665 67778899999999888777777777788853
No 236
>PRK06060 acyl-CoA synthetase; Validated
Probab=33.17 E-value=3.5e+02 Score=28.69 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=64.9
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++- +.|| ..+|++.+...+..+... . +++.++|++....+-.. .+...++..+..|+..+..+
T Consensus 144 ~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~--~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 220 (705)
T PRK06060 144 GDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRK--A-LRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINS 220 (705)
T ss_pred CCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHH--h-hCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeC
Confidence 56777654 2333 357888877665544321 2 56788888776654332 23345567788898888776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
.......+..++++.++.++...+.....+
T Consensus 221 ~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l 250 (705)
T PRK06060 221 APVTPEAAAILSARFGPSVLYGVPNFFARV 250 (705)
T ss_pred CCCCHHHHHHHHHhcCCeEEeeHHHHHHHH
Confidence 667778888888999999998877666544
No 237
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=32.79 E-value=1.8e+02 Score=30.57 Aligned_cols=67 Identities=12% Similarity=0.014 Sum_probs=48.5
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC--CC-CHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP--VN-TESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~-~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
.+++++|++....+-+......+++.+..|+..+..+. .. ++..+..++++.++.++.+.......+
T Consensus 301 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 370 (652)
T TIGR01217 301 CDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMAC 370 (652)
T ss_pred cCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHH
Confidence 68899999888777665443345688899999887752 32 567888899999999876655554443
No 238
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=32.77 E-value=4.2e+02 Score=27.35 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=62.0
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHH----HHHHHHhCC--eEecCCC------CCCHHHHHH
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL----YFSLLSLGV--IISPANP------VNTESEISR 136 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~----~lA~~~~G~--~~v~l~~------~~~~~~l~~ 136 (473)
.....++.+.+++++..+.+ +++|.|+..-..+-+.+ +.++-++|+ +...++. .++.+.+..
T Consensus 49 P~~l~~m~~a~~ri~~ai~~------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 35567777888888777655 67899998877765543 445566787 2233332 567788887
Q ss_pred HHhhcCCeEEEEccc------hHHHHhcCCCeEEEEcCC
Q 012015 137 QIQLSNPVIAFATSS------VVHKLAKLKHRTILIDSP 169 (473)
Q Consensus 137 ~l~~~~~~~ii~~~~------~~~~~~~~~~~~~~~~~~ 169 (473)
+.+ .+++++|+-+. ......+.+..+|+.|..
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC
Confidence 665 46777776432 333446778888888854
No 239
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=32.45 E-value=3.6e+02 Score=27.33 Aligned_cols=91 Identities=8% Similarity=0.031 Sum_probs=61.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc--HHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++.. .+| ..+|+..+...+..+ ... .++.++|++....+-... ++..+++.+..|+..+...
T Consensus 186 ~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 186 GDELAAVLFTSGTEGLPKGVMLTHNNILASERAY---CAR-LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH---HHh-cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 566766542 223 357888876554432 233 677899998877664432 4456777788899888765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccc
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
..+.+.+...+++.++.+++....
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~~~ 285 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGATP 285 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEeccHH
Confidence 467788888899999988876433
No 240
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=32.36 E-value=3.5e+02 Score=24.83 Aligned_cols=59 Identities=10% Similarity=0.000 Sum_probs=43.8
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV 152 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 152 (473)
++|+.|.. ...+..-...-++|.++|..+..+-|...+......++..++++++++...
T Consensus 51 ~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 51 KPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 35666544 677888888888999999877666565555566678888999999987654
No 241
>PRK13383 acyl-CoA synthetase; Provisional
Probab=31.93 E-value=2.7e+02 Score=28.00 Aligned_cols=84 Identities=12% Similarity=0.029 Sum_probs=59.0
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++...++-.- ..+..++..+..|+..+.++ .+..+.+...+++.+++.++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 367676655554444333 25677888887776432 23356778888999988875 467899999999999999988
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 77665544
No 242
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=31.88 E-value=3.6e+02 Score=25.06 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=45.1
Q ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 91 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
-+++|++| |=...+.--+..-+.|...|..++.+=|..-+.+...+|+..++.+++++.
T Consensus 58 ~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 58 LLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 38899843 444456666777777778898887776766667778899999999999986
No 243
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=31.84 E-value=5e+02 Score=25.37 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCCCEEEEEeCCCCcHHHH----HH-----HHHHhCCeEecCCC---CCCHHHHHHHHhhcCCeEEEEccchH------H
Q 012015 93 SKNDTAFVLSTNSIEIPIL----YF-----SLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVV------H 154 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~----~l-----A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~------~ 154 (473)
++||+|..+....-..+.. -. .-..--.+..++++ ..+.++++.++++.+|++|++..+.. +
T Consensus 108 ~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~~ 187 (399)
T PF00464_consen 108 KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDFK 187 (399)
T ss_dssp -TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---HH
T ss_pred hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCHH
Confidence 6889988765443222111 11 22223345556774 45779999999999999999986532 2
Q ss_pred HHhcC---CCeEEEEcCCChhhhhcccCCCccccccccCCCCEEEEEccCCCC--CCcchhhhcH
Q 012015 155 KLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTT--GRVKGVMLTH 214 (473)
Q Consensus 155 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT--G~PK~V~~sh 214 (473)
.++++ -.-.+..|...+.-++..+.-..+. ... | .+..|.--| |..+|++++.
T Consensus 188 ~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~----~~A-D--vvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 188 RFREIADEVGAYLMADISHIAGLIAGGLFPNPF----PYA-D--VVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp HHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC----CTS-S--EEEEESSGGG-SSS-EEEEES
T ss_pred HHHHHHHhcCcEEEecccccccceehheecCcc----ccc-e--EEEeeccccccccCceEEEEc
Confidence 23222 1234556666666666654321111 111 2 333333333 6677888887
No 244
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=31.44 E-value=3.2e+02 Score=27.81 Aligned_cols=102 Identities=9% Similarity=0.115 Sum_probs=60.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH---HHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP---ILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l 125 (473)
++.++++.. .+| ..+|+..+...+.....++.....+++++.+.+......... ...+..+..|...+.+
T Consensus 207 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 286 (560)
T PRK08751 207 PDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLI 286 (560)
T ss_pred cccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEe
Confidence 566766543 223 458899988877777666543112667776655433222211 1233445556555444
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
........+...+++.++.++...+.....+.
T Consensus 287 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 318 (560)
T PRK08751 287 SNPRDMPGFVKELKKTRFTAFTGVNTLFNGLL 318 (560)
T ss_pred cCcCCHHHHHHHHHhcceeEecChHHHHHHHH
Confidence 44456778888899999988877666554443
No 245
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=31.42 E-value=2.4e+02 Score=27.87 Aligned_cols=55 Identities=25% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCCCCEEEEEeCCCCcHHHHHH--HHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 012015 92 LSKNDTAFVLSTNSIEIPILYF--SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~l--A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 148 (473)
+++||.|.+.. +....-..++ .+.+.|+.+..++...+++.++..++. +.++|++
T Consensus 97 l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 97 CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 46677665522 2222112221 245567777777666666666666653 4455554
No 246
>PRK05857 acyl-CoA synthetase; Validated
Probab=31.34 E-value=3.2e+02 Score=27.73 Aligned_cols=80 Identities=18% Similarity=0.077 Sum_probs=58.1
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+..+...+ .+..+++++...++-... .+..+++.+..|+..+.++ .+..+.+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 3478888876665554433 256778888887765543 3356788889999988875 46788898999998888887
Q ss_pred ecHH
Q 012015 287 VTPP 290 (473)
Q Consensus 287 ~~P~ 290 (473)
..+.
T Consensus 119 ~~~~ 122 (540)
T PRK05857 119 VAPG 122 (540)
T ss_pred Eecc
Confidence 7664
No 247
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=30.81 E-value=72 Score=24.64 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=42.8
Q ss_pred ecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHH--HHHHHh-CCeEecC
Q 012015 70 VSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY--FSLLSL-GVIISPA 125 (473)
Q Consensus 70 ~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~--lA~~~~-G~~~v~l 125 (473)
=|-.++.+.+..+-..+.++.++.+.|.|.+.+.-..++-..+ .|+=+. |...||+
T Consensus 13 nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~Gw~~Vpl 71 (117)
T TIGR01796 13 NEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPAAAARGLPGWTDVPV 71 (117)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHHHHhccCCCCcce
Confidence 4568899999999988888799999999999887777665554 444455 7766665
No 248
>PRK06381 threonine synthase; Validated
Probab=30.72 E-value=1.6e+02 Score=27.60 Aligned_cols=89 Identities=7% Similarity=-0.046 Sum_probs=54.9
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 012015 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (473)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 137 (473)
++.+-....+-+=||++ +.+..+...+.+ .|. +.| +....+..-..+-++|...|..+..+-|...+......
T Consensus 32 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~-~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~ 104 (319)
T PRK06381 32 KIYLKFEGANPTGTQKD--RIAEAHVRRAMR-LGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKE 104 (319)
T ss_pred eEEEEecCCCCccCcHH--HHHHHHHHHHHH-cCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 45555553344444444 222222223334 342 344 45667888888888999999876665555455555678
Q ss_pred HhhcCCeEEEEccchH
Q 012015 138 IQLSNPVIAFATSSVV 153 (473)
Q Consensus 138 l~~~~~~~ii~~~~~~ 153 (473)
++..++++++++....
T Consensus 105 l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 105 MEKYGAEIIYVDGKYE 120 (319)
T ss_pred HHHcCCEEEEcCCCHH
Confidence 9999999999986543
No 249
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=30.45 E-value=87 Score=26.84 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=27.7
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVL 101 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~ 101 (473)
.-+||.++.+.+..+|..+.+ -|.+|.-.|+|.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEEc
Confidence 468999999999999999998 799987555543
No 250
>PLN00011 cysteine synthase
Probab=30.41 E-value=3.8e+02 Score=25.17 Aligned_cols=60 Identities=12% Similarity=-0.040 Sum_probs=45.8
Q ss_pred CCCCC-CEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccc
Q 012015 91 RLSKN-DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (473)
Q Consensus 91 g~~~g-d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (473)
.+.+| +.|. ....+..-...-+++..+|..+..+-|...+......++..++.+++++..
T Consensus 64 ~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 64 LITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 36677 5554 467788888888899999997766656555567778899999999998753
No 251
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=30.32 E-value=1.2e+02 Score=24.35 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=35.4
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEe--CCCCcHHHHHHHHHHhCCeEecC
Q 012015 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLS--TNSIEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~--~~~~~~~~~~lA~~~~G~~~v~l 125 (473)
+...-.++-..+++.+.+.+.+++||.+.++. .+++..+-+...+-..|+.++-|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 34444455567788887756789999998886 45567777777888888877644
No 252
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=30.21 E-value=39 Score=21.10 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=19.3
Q ss_pred eEEEecCCCCCHHHHHHHHHhC
Q 012015 310 ETVACGAAPLGKDTIMAFASKF 331 (473)
Q Consensus 310 r~v~~~G~~l~~~~~~~~~~~~ 331 (473)
+++-++|.|++.+..+.++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 5788999999999998888876
No 253
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=30.03 E-value=4e+02 Score=27.59 Aligned_cols=99 Identities=15% Similarity=0.024 Sum_probs=60.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++-. .|| ..+|++.+...+..+...+.. .+ ..++++...+|-. ..+...++.++..|+.++..+
T Consensus 208 ~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~-~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~ 285 (614)
T PRK08180 208 PDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPF-LA-EEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDD 285 (614)
T ss_pred cCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccc-cC-CCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeC
Confidence 677776542 233 468999988777665544422 11 2456666666533 234456677788898887765
Q ss_pred CCCCH---HHHHHHHhhcCCeEEEEccchHHHH
Q 012015 127 PVNTE---SEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 127 ~~~~~---~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
....+ .++...+++.++.++...+.....+
T Consensus 286 ~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l 318 (614)
T PRK08180 286 GKPTPGGFDETLRNLREISPTVYFNVPKGWEML 318 (614)
T ss_pred CCccchhHHHHHHHHHHhCCcEEechHHHHHHH
Confidence 33333 3455667888999888776655444
No 254
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=30.01 E-value=1.8e+02 Score=28.00 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=47.6
Q ss_pred EEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHH
Q 012015 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH 154 (473)
Q Consensus 99 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (473)
.+++.-+.....+.+++.++|..+..+=|...+...-+.++..++.+++....+.+
T Consensus 117 ViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 117 VIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred eEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 35566778899999999999998888888999999999999999999998766543
No 255
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.01 E-value=2.9e+02 Score=28.23 Aligned_cols=84 Identities=12% Similarity=0.041 Sum_probs=60.6
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+......+ .+..+++++....|-.-. .+...++.+..|+..+.+. .+..+.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 468888866655544433 256788888887776543 3366788888999888775 578899999999999999988
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77655443
No 256
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=29.66 E-value=57 Score=22.53 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=18.2
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEE
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i 100 (473)
.+.|-+-.-+...+-..|++ .|++.||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~-~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRK-AGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHT-TT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHH-cCCCCCCEEEE
Confidence 33444444445556677877 89999999987
No 257
>PRK07514 malonyl-CoA synthase; Validated
Probab=29.45 E-value=2.8e+02 Score=27.62 Aligned_cols=84 Identities=10% Similarity=-0.046 Sum_probs=59.0
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|...+...+......+ .+..+++++....+-.. -....+++.+..|+..+.++ ......+...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 3577777755554444332 26778888887777553 33366788899999888775 46788899999999999988
Q ss_pred ecHHHHHH
Q 012015 287 VTPPIVVA 294 (473)
Q Consensus 287 ~~P~~~~~ 294 (473)
..+.....
T Consensus 106 ~~~~~~~~ 113 (504)
T PRK07514 106 CDPANFAW 113 (504)
T ss_pred EccchhHH
Confidence 87665543
No 258
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=29.27 E-value=3.6e+02 Score=26.64 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=19.2
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecC
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 125 (473)
-.|.+|+|.......+-++-+ +..+|+.++.+
T Consensus 301 l~gkrv~i~g~~~~~~~la~~-L~elGm~v~~~ 332 (435)
T cd01974 301 LHGKKFALYGDPDFLIGLTSF-LLELGMEPVHV 332 (435)
T ss_pred cCCCEEEEEcChHHHHHHHHH-HHHCCCEEEEE
Confidence 357889988765443333323 33789877553
No 259
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=29.22 E-value=72 Score=29.30 Aligned_cols=53 Identities=19% Similarity=0.320 Sum_probs=42.1
Q ss_pred ceecHHHHHH-----HHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCe
Q 012015 68 LRVSFSEFTR-----RTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (473)
Q Consensus 68 ~~~Ty~el~~-----~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 121 (473)
..+.|.++.. ....+...|.+ .|+.++++|.++|.++...-.+++++-.+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFG-RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3567777763 24566666776 89999999999999999999999999888864
No 260
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=29.19 E-value=2.3e+02 Score=26.85 Aligned_cols=77 Identities=13% Similarity=0.040 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHH-HHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 012015 72 FSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP-ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (473)
Q Consensus 72 y~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (473)
|....+..+++...|.+.+|..+. .+.+...++.+.+ .++.+.+..|-.++..++..........++..+++++.++
T Consensus 27 ~~~~~~~~~~~~~~la~~~g~~~~-~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 27 SPEFLALMDEILEGLRYVFQTENG-LTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCC-CEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 444455556666666664565333 3444555544443 3334555566655544443333233455566666665543
No 261
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=29.09 E-value=3.3e+02 Score=26.98 Aligned_cols=58 Identities=16% Similarity=-0.002 Sum_probs=44.2
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
+.+|+.|.- +..+..-...-++|.+.|..+..+-|...+......++..++++++++.
T Consensus 59 ~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 59 LKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 367777544 4678888888889999999777666655556677788999999999874
No 262
>PRK07476 eutB threonine dehydratase; Provisional
Probab=29.00 E-value=3.4e+02 Score=25.49 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=41.1
Q ss_pred EEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH
Q 012015 100 VLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (473)
Q Consensus 100 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (473)
+....+..-..+-+++.+.|..++.+-|...+......++..++++++++....
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 444667788888889999998766665665556677788999999999986543
No 263
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=28.97 E-value=3.1e+02 Score=22.13 Aligned_cols=78 Identities=13% Similarity=0.071 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHhHHh--cCCCCCCEEEEEe-CCCCcHHH-HHHHHHHhCCeEecCCCCC-------CHHHHHHHHhhc
Q 012015 73 SEFTRRTNSLASYLQNV--TRLSKNDTAFVLS-TNSIEIPI-LYFSLLSLGVIISPANPVN-------TESEISRQIQLS 141 (473)
Q Consensus 73 ~el~~~~~~la~~L~~~--~g~~~gd~V~i~~-~~~~~~~~-~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~ 141 (473)
..|.+++..+-....+. ...-+|..|++++ .+|...-+ .-.|+.++|+.++-+++.. +.......+...
T Consensus 15 ~~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~ 94 (142)
T PF02729_consen 15 EALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh
Confidence 44556666666666551 1345677877654 66665544 4567899999999888643 346666777777
Q ss_pred CCeEEEEccc
Q 012015 142 NPVIAFATSS 151 (473)
Q Consensus 142 ~~~~ii~~~~ 151 (473)
++++++-..
T Consensus 95 -~D~iv~R~~ 103 (142)
T PF02729_consen 95 -VDAIVIRHP 103 (142)
T ss_dssp -CSEEEEEES
T ss_pred -hheEEEEec
Confidence 777776433
No 264
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=28.89 E-value=3.8e+02 Score=23.07 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhccCCCCCCCcEEEEecC-hhhHHhH-HHHHHHhhhcCeEE-EecCCCHHHHHHHHHHcccceEEecH--
Q 012015 215 RNLTAAVASSFASSPKRVSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAV-VMQRFDLKMMLKAVEEFRVTHAAVTP-- 289 (473)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~l~~~p-l~~~~g~-~~~l~~l~~G~~~v-~~~~~~~~~~~~~i~~~~~t~~~~~P-- 289 (473)
+..+..+..............+++.+.| =.|..|. ......-..|-.++ +-....++.+.+.+.+.+++++..+-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHhcCCCCCCC--CCCCceEEEecCCCCCHHHHHHH
Q 012015 290 ----PIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAF 327 (473)
Q Consensus 290 ----~~~~~l~~~~~~~~~--~l~~lr~v~~~G~~l~~~~~~~~ 327 (473)
..+..+.+..++... +.+ ++.||.+++.+..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~----i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVK----VMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCe----EEEECCcCCHHHHHHc
No 265
>PTZ00297 pantothenate kinase; Provisional
Probab=28.84 E-value=3.2e+02 Score=31.86 Aligned_cols=83 Identities=14% Similarity=0.197 Sum_probs=60.1
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCC--CcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (473)
..+|++.+...+..++..... .+..++|+...++|=. .+ .++.++++..|+.... .+++.+...++..+|.+
T Consensus 619 VmLTH~Nlla~~~~~~~~~~~-~~~~~~D~~Ls~LPLaHI~e-r~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv 692 (1452)
T PTZ00297 619 VRVTHADVLRDISTLVMTGVL-PSSFKKHLMVHFTPFAMLFN-RVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTI 692 (1452)
T ss_pred EEEeHHHHHHHHHHHhhhccc-cCCCCCCEEEEechHHHHHH-HHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEE
Confidence 579999999998887654221 2346788887777643 33 3456777888988752 35788899999999999
Q ss_pred EEEccchHHHH
Q 012015 146 AFATSSVVHKL 156 (473)
Q Consensus 146 ii~~~~~~~~~ 156 (473)
++.-+...+++
T Consensus 693 ~~~VPrv~ekI 703 (1452)
T PTZ00297 693 LVAAPSLFSTS 703 (1452)
T ss_pred EEecHHHHHHH
Confidence 99877655543
No 266
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=28.12 E-value=2.3e+02 Score=28.94 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=67.6
Q ss_pred hhhhcHHHHHHHHHHhhccCC----CCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccc
Q 012015 209 GVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVT 283 (473)
Q Consensus 209 ~V~~sh~~l~~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t 283 (473)
+..+|++.+......+...+- +..++|++...+|-...+. ...++++..|+.+.... .++...+...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 567888888766655555441 3678999999988765433 45678888898888775 57899999999999999
Q ss_pred eEEecHHHHHHHhcC
Q 012015 284 HAAVTPPIVVAMSKG 298 (473)
Q Consensus 284 ~~~~~P~~~~~l~~~ 298 (473)
.++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999988777776544
No 267
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=28.08 E-value=3.2e+02 Score=27.37 Aligned_cols=82 Identities=7% Similarity=0.007 Sum_probs=58.0
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|...+...+..+...+ .+..+++++....+-.... ...++.++..|+.++.+. .+..+.+...+++.+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 367777765554444322 2677788888877665432 256778888999888775 468899999999999999988
Q ss_pred cHHHHH
Q 012015 288 TPPIVV 293 (473)
Q Consensus 288 ~P~~~~ 293 (473)
.+....
T Consensus 116 ~~~~~~ 121 (517)
T PRK08008 116 SAQFYP 121 (517)
T ss_pred ecchhH
Confidence 776543
No 268
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=27.93 E-value=1.6e+02 Score=27.64 Aligned_cols=90 Identities=11% Similarity=0.000 Sum_probs=56.0
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 012015 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (473)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 137 (473)
++.+-....+-+=|+++- .....+.....+ |..+++.|... ..+..-...-++|.+.|..++.+-|...+......
T Consensus 17 ~i~~K~E~~nptGS~K~R-~a~~~l~~a~~~--g~~~~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 17 NVFLKLENLQPSGSFKIR-GIGHLCQKSAKQ--GLNECVHVVCS-SGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred eEEEEeccCCCcCChHHH-HHHHHHHHHHHh--hcccCCeEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 344444322334445542 123333333332 33345665544 45777777888899999977777666666777888
Q ss_pred HhhcCCeEEEEccc
Q 012015 138 IQLSNPVIAFATSS 151 (473)
Q Consensus 138 l~~~~~~~ii~~~~ 151 (473)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998765
No 269
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=27.75 E-value=4.1e+02 Score=26.94 Aligned_cols=83 Identities=8% Similarity=-0.101 Sum_probs=58.4
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+..+...+ .+..+++++...++-...+ +..++.++..|+..+.+. .....++...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 3578888876665554433 2567788888777665432 256788888999888775 45678889999999998887
Q ss_pred ecHHHHH
Q 012015 287 VTPPIVV 293 (473)
Q Consensus 287 ~~P~~~~ 293 (473)
..+..+.
T Consensus 133 ~~~~~~~ 139 (546)
T PLN02330 133 TNDTNYG 139 (546)
T ss_pred Eccchhh
Confidence 7655443
No 270
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.69 E-value=1.3e+02 Score=24.12 Aligned_cols=92 Identities=10% Similarity=0.054 Sum_probs=51.3
Q ss_pred hhHHhH-HHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEecH------HHHHHHhcCCCCCCCCCCCceEEEec
Q 012015 244 FHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTP------PIVVAMSKGGSTDGYDLSSLETVACG 315 (473)
Q Consensus 244 ~~~~g~-~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P------~~~~~l~~~~~~~~~~l~~lr~v~~~ 315 (473)
.|..|. ......-..|-.++... ...++++.+.+.+++++.+..+- ..+..+.+..+.. .++.+ .+++|
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~--~~~~~-~i~vG 91 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA--GLGDI-LLYVG 91 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc--CCCCC-eEEEE
Confidence 566666 33333445666666664 46789999999999999876542 1223333322222 13344 35566
Q ss_pred CCCC-C----HHHHHHHHHhCCCCeEEeecCC
Q 012015 316 AAPL-G----KDTIMAFASKFPKVVLVQAYGL 342 (473)
Q Consensus 316 G~~l-~----~~~~~~~~~~~~~~~~~~~yG~ 342 (473)
|... + ++..+++++. | +-..|+.
T Consensus 92 G~~~~~~~~~~~~~~~l~~~--G--~~~vf~~ 119 (137)
T PRK02261 92 GNLVVGKHDFEEVEKKFKEM--G--FDRVFPP 119 (137)
T ss_pred CCCCCCccChHHHHHHHHHc--C--CCEEECc
Confidence 6543 3 3444566654 4 3445553
No 271
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=27.66 E-value=4.5e+02 Score=26.12 Aligned_cols=47 Identities=6% Similarity=-0.118 Sum_probs=34.5
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHH-HHHhCCeEecC--C------------CCCCHHHHHHHHhhc
Q 012015 90 TRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA--N------------PVNTESEISRQIQLS 141 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--~------------~~~~~~~l~~~l~~~ 141 (473)
.++++||.| .+..++....+ +...|++++=+ + .+++.+.++..++..
T Consensus 105 l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 105 IAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred hCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 789999977 34667677776 68888877666 2 245788999888753
No 272
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=27.46 E-value=86 Score=27.83 Aligned_cols=40 Identities=28% Similarity=0.543 Sum_probs=23.4
Q ss_pred CCCccEEEEecCccccccCCCccccccccCCCCeeecCceEEEc----------cCCcEEEEecc
Q 012015 386 PGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----------EDGFLFIVDRL 440 (473)
Q Consensus 386 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~----------~~g~l~~~GR~ 440 (473)
+|.++|||++- ||+- .-||+.+.++||.. ..|++||+.+.
T Consensus 172 PgiiaELC~SD---------DP~Y------tTGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~ 221 (239)
T PF03744_consen 172 PGIIAELCWSD---------DPDY------TTGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGS 221 (239)
T ss_pred CcceEEEEecC---------CCCC------ceEEEEeCCcceEECccccccCCCCCCEEEEEeCC
Confidence 68889999853 3322 23556666665541 23677776553
No 273
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=27.30 E-value=2.8e+02 Score=25.48 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=36.2
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC----------CCCHHHHHHHHhh-cCCeEEEEc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP----------VNTESEISRQIQL-SNPVIAFAT 149 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 149 (473)
+++||+|.+.-+ .+...+-++...|+.++.+.+ ..+.+.++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~---~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRN---CHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCC---chHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 478998887643 333445566778987776654 3567888888865 457765543
No 274
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.17 E-value=3.7e+02 Score=26.83 Aligned_cols=84 Identities=8% Similarity=-0.082 Sum_probs=58.2
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|...+...+......+ .+..+++++....+-.. ..+..++.++..|+..+.++ .+....+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 356666655444433333 25677888888776653 33466788999999988775 467788888999999998888
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 76655443
No 275
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=26.78 E-value=3.3e+02 Score=21.77 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 107 EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 107 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
...+....+-..|.-++.+-.+.+++++.....+.+|++|..+.
T Consensus 19 G~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 19 GNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34445556667899999999999999999999999999998764
No 276
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=26.76 E-value=3.7e+02 Score=27.89 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=63.9
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCc--HHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++- +.|| ..+|.+.+.. .++..+....+++++|++....+-+.. ....+++.+..|+..+...
T Consensus 232 ~~d~a~il~TSGTTG~PKgV~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 232 SNEPSYILYTSGTTGKPKGVQRDTGGYAV---ALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred CCCceEEEeecCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 56666654 2333 2355554422 233333333578899988776655442 2456788889999887665
Q ss_pred C---CCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 P---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
. ..++..+..++++.++.++.+.+.....+.
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 342 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLK 342 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 3 235678889999999999999887776554
No 277
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=26.71 E-value=2.8e+02 Score=28.85 Aligned_cols=79 Identities=11% Similarity=0.034 Sum_probs=59.1
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+..+...+ .+..+++++...+|-.-. .+..+++++..|+..+.+. .+..+.+...+++.++..++
T Consensus 97 ~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li 175 (637)
T PRK00174 97 RKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVI 175 (637)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4578888877665554433 367788998888776532 2356788899999988875 57889999999999999988
Q ss_pred ecH
Q 012015 287 VTP 289 (473)
Q Consensus 287 ~~P 289 (473)
...
T Consensus 176 ~~~ 178 (637)
T PRK00174 176 TAD 178 (637)
T ss_pred EcC
Confidence 654
No 278
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=26.65 E-value=2.4e+02 Score=24.99 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=42.1
Q ss_pred CCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccch
Q 012015 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV 152 (473)
Q Consensus 94 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 152 (473)
+++.|.. ...+..-....++|...|..++.+-|...+......++..+++++.++...
T Consensus 49 ~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 49 PKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred CCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 3555444 445677777778888899877766665566777778888999999988763
No 279
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=26.52 E-value=2.7e+02 Score=28.87 Aligned_cols=96 Identities=14% Similarity=0.064 Sum_probs=65.6
Q ss_pred CCCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-
Q 012015 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (473)
Q Consensus 190 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~- 266 (473)
.++.+|++.... .+|. ...+|.+.+...+..+...+ .+..+++++...+|-.- -.+..+++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 345566554221 1221 23578888866665544433 36788999998887653 33466788889999888774
Q ss_pred CCCHHHHHHHHHHcccceEEecH
Q 012015 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (473)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P 289 (473)
.+..+.+...+++.+++.++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~ 168 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITAD 168 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcC
Confidence 57889999999999999988754
No 280
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=26.18 E-value=2.3e+02 Score=23.94 Aligned_cols=44 Identities=11% Similarity=0.072 Sum_probs=28.6
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCC-CEEEEEeCCCCcHHHHHH
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRLSKN-DTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~~~g-d~V~i~~~~~~~~~~~~l 113 (473)
-+|..|+.+++.++|..+.+.+. ..| +.|.+...++-..++..+
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~-~~~~~~vvvgI~~Gg~~fa~~L 52 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYK-DSGSDMVLVGLLRGSFMFMADL 52 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhc-ccCCCeEEEEEecCChHHHHHH
Confidence 47899999999999999987432 113 345555445544444433
No 281
>PRK05850 acyl-CoA synthetase; Validated
Probab=26.15 E-value=6.2e+02 Score=25.86 Aligned_cols=84 Identities=11% Similarity=-0.059 Sum_probs=58.9
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC----CCHHHHHHHHHHcccc
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVT 283 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t 283 (473)
..+|++.+...+......+ .+ .+++++...++-.. -.+..+++.+..|+.++.++. ...+.+...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 3578888866555444333 13 46788877777543 333667888999999988863 3567889999999999
Q ss_pred eEEecHHHHHHH
Q 012015 284 HAAVTPPIVVAM 295 (473)
Q Consensus 284 ~~~~~P~~~~~l 295 (473)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999887766554
No 282
>PRK07798 acyl-CoA synthetase; Validated
Probab=25.75 E-value=6.6e+02 Score=25.10 Aligned_cols=84 Identities=7% Similarity=-0.141 Sum_probs=57.0
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+..+...+ .+..+++++....+-.- -.+...+..+..|+..+..+ ....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 477777765554443333 25677887777665432 22356678888898888775 467788999999999999888
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
.......+
T Consensus 107 ~~~~~~~~ 114 (533)
T PRK07798 107 EREFAPRV 114 (533)
T ss_pred chhhHHHH
Confidence 76654444
No 283
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=25.74 E-value=79 Score=31.21 Aligned_cols=68 Identities=13% Similarity=0.210 Sum_probs=48.6
Q ss_pred cCCCCCCEEEEEeC-CCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 90 TRLSKNDTAFVLST-NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 90 ~g~~~gd~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
.|..+...|...-| -+...+.+=|-=+..-+.++|++.++.-..+..+++..+|+++++.+.+.....
T Consensus 413 ~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~~ 481 (653)
T KOG1138|consen 413 WGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPIP 481 (653)
T ss_pred hcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCCC
Confidence 45555555555444 334444444555666788899999999999999999999999999887665443
No 284
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=25.63 E-value=31 Score=16.03 Aligned_cols=9 Identities=33% Similarity=0.726 Sum_probs=6.4
Q ss_pred ecCCccccc
Q 012015 339 AYGLTESTA 347 (473)
Q Consensus 339 ~yG~tE~~~ 347 (473)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 285
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.32 E-value=5.6e+02 Score=25.86 Aligned_cols=91 Identities=11% Similarity=0.153 Sum_probs=59.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCC-CEEEEEeCCC--CcHHHHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKN-DTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~g-d~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 125 (473)
++.++++.. .+| ..+|++.+...+..+.. . .++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 151 ~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 151 EDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---A-AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---h-cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 567776643 222 46899988765544433 2 566766 7877766543 34455566778889988877
Q ss_pred CCC---CCHHHHHHHHhhcCCeEEEEcc
Q 012015 126 NPV---NTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 126 ~~~---~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
.+. ..+..+..++++.++.++.+..
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 254 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPN 254 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECch
Confidence 653 2556777889999998765443
No 286
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.28 E-value=6.4e+02 Score=25.49 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=55.8
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCC-CCCCEEEEEeCCCC-cHHHHHHHHHHhCCeEecCC-CCCCHHHHHHHHhhcCCeE
Q 012015 69 RVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPAN-PVNTESEISRQIQLSNPVI 145 (473)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~g~-~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~ 145 (473)
.+|+..+...+..+.. . .++ ..++++.+..+... ..+..+++.+..|+..+..+ ...+++.+...+++.++..
T Consensus 193 ~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~ 268 (542)
T PRK07786 193 VLTHANLTGQAMTCLR---T-NGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTG 268 (542)
T ss_pred hhhHHHHHHHHHHHHH---h-cCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeE
Confidence 5788887665554332 2 455 44555554443221 12355778888998877643 3567889999999999999
Q ss_pred EEEccchHHHHh
Q 012015 146 AFATSSVVHKLA 157 (473)
Q Consensus 146 ii~~~~~~~~~~ 157 (473)
+...+.....+.
T Consensus 269 ~~~~P~~l~~l~ 280 (542)
T PRK07786 269 IFLVPAQWQAVC 280 (542)
T ss_pred EEehHHHHHHHH
Confidence 998887665553
No 287
>PRK08162 acyl-CoA synthetase; Validated
Probab=25.24 E-value=3.1e+02 Score=27.75 Aligned_cols=84 Identities=8% Similarity=-0.067 Sum_probs=60.7
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+......+ .+..+++++...+|-... .+..++..+..|+..+.+. ......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 478888866655544433 257788888887776542 2356778888898888775 467899999999999999988
Q ss_pred cHHHHHHH
Q 012015 288 TPPIVVAM 295 (473)
Q Consensus 288 ~P~~~~~l 295 (473)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 77655433
No 288
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.03 E-value=1e+02 Score=28.93 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=40.9
Q ss_pred eecHHHHHHH------HHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCe
Q 012015 69 RVSFSEFTRR------TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (473)
Q Consensus 69 ~~Ty~el~~~------~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 121 (473)
.+.|.++... ...+...+.+ .|+.+++.|.++|..+.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~-~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQ-EGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4666666432 4567777777 89999999999999999888888998888864
No 289
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=25.02 E-value=7e+02 Score=24.88 Aligned_cols=66 Identities=12% Similarity=0.026 Sum_probs=47.4
Q ss_pred cCCCCCCEEEEEeCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 90 TRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 90 ~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
+++.+++++....+-... .....+..+..|+..+.. +..+++.+...+++.++.+++..+.....+
T Consensus 191 ~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 257 (509)
T PRK12406 191 YGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRL 257 (509)
T ss_pred cCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHH
Confidence 678999988877654322 223334456678776654 467889999999999999999888776554
No 290
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=24.88 E-value=1.4e+02 Score=25.60 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 75 FTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 75 l~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
-.+|.+.+++++.++++++++|...++... |.-++|+ +++...+.-++++|.+.+
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 357888899998887999999988887754 4445555 455666677777776543
No 291
>PRK00901 methylated-DNA--protein-cysteine methyltransferase; Provisional
Probab=24.77 E-value=1.7e+02 Score=24.09 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=16.7
Q ss_pred CceecHHHHHHH------HHHHHHHhHH
Q 012015 67 GLRVSFSEFTRR------TNSLASYLQN 88 (473)
Q Consensus 67 ~~~~Ty~el~~~------~~~la~~L~~ 88 (473)
|++.||+||.++ ++.++..+.+
T Consensus 88 G~t~tY~~lA~~~g~p~a~RAVg~A~~~ 115 (155)
T PRK00901 88 GETRSYKEIAVNIGNPKACRAVGLANNK 115 (155)
T ss_pred CCcCCHHHHHHHHCCCchHHHHHHHHHh
Confidence 899999999885 4456666655
No 292
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=24.74 E-value=5.8e+02 Score=25.19 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=40.6
Q ss_pred CCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCC----------------CHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----------------TESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 94 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----------------~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
.|.+|+|......-+-++-+ +..+|..++-+-... +..++..++++.++.++|.+........
T Consensus 310 ~Gkrvai~~~~~~~~~l~~~-l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~~~dliig~s~~k~~A~ 388 (432)
T TIGR01285 310 GGKKVAIAAEPDLLAAWATF-FTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAAGADLLITNSHGRALAQ 388 (432)
T ss_pred CCCEEEEEcCHHHHHHHHHH-HHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhcCCCEEEECcchHHHHH
Confidence 48899999865543333333 568898776554322 2345566666666666666554433333
Q ss_pred cCCCeEEEEc
Q 012015 158 KLKHRTILID 167 (473)
Q Consensus 158 ~~~~~~~~~~ 167 (473)
+.+...+-+.
T Consensus 389 ~l~ip~ir~g 398 (432)
T TIGR01285 389 RLALPLVRAG 398 (432)
T ss_pred HcCCCEEEec
Confidence 4444444333
No 293
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=24.40 E-value=77 Score=21.91 Aligned_cols=21 Identities=14% Similarity=0.098 Sum_probs=15.7
Q ss_pred HHHHHHhHHhcCCCCCCEEEEE
Q 012015 80 NSLASYLQNVTRLSKNDTAFVL 101 (473)
Q Consensus 80 ~~la~~L~~~~g~~~gd~V~i~ 101 (473)
..+-..|.+ .|++.||.|-|.
T Consensus 43 ~Gv~~~L~~-~G~~~GD~V~Ig 63 (69)
T TIGR03595 43 LGVEDALRK-AGAKDGDTVRIG 63 (69)
T ss_pred CCHHHHHHH-cCCCCCCEEEEc
Confidence 335556666 799999999875
No 294
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=24.36 E-value=7.6e+02 Score=25.93 Aligned_cols=84 Identities=8% Similarity=-0.105 Sum_probs=59.5
Q ss_pred hcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEec
Q 012015 212 LTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVT 288 (473)
Q Consensus 212 ~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 288 (473)
+|.+.+...+..+...+ .+..+++++...++-..- .+...++++..|+..+.+. .+.++.+...++..+++.++..
T Consensus 77 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~ 155 (660)
T PLN02430 77 KTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQ 155 (660)
T ss_pred EEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEEC
Confidence 57777766655544333 267888888877765432 2256778888998888774 5788999999999999999987
Q ss_pred HHHHHHHh
Q 012015 289 PPIVVAMS 296 (473)
Q Consensus 289 P~~~~~l~ 296 (473)
...+..++
T Consensus 156 ~~~~~~~~ 163 (660)
T PLN02430 156 DKKIKELL 163 (660)
T ss_pred HHHHHHHH
Confidence 76444333
No 295
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=24.30 E-value=2.2e+02 Score=30.08 Aligned_cols=57 Identities=12% Similarity=0.167 Sum_probs=39.9
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCC---------C-----HHHHHHHHhhc-CCe----EEEEccc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN---------T-----ESEISRQIQLS-NPV----IAFATSS 151 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~ 151 (473)
+++||.|. +-.|+--.+.. |+..+|+.+|.+.|.. + ++.++..++.. +++ ++|+.+.
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT 307 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST 307 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC
Confidence 47899776 44566555444 9999999999998764 3 67778777654 333 6676654
No 296
>PRK12582 acyl-CoA synthetase; Provisional
Probab=24.10 E-value=3e+02 Score=28.59 Aligned_cols=77 Identities=8% Similarity=-0.070 Sum_probs=54.3
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC-CC-----HHHHHHHHHHccc
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FD-----LKMMLKAVEEFRV 282 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-~~-----~~~~~~~i~~~~~ 282 (473)
.+|.+.+...+......+ .+..+++++...++-. .-.+...+.++..|+..+.+.. +. .+++...+++.++
T Consensus 80 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~ 158 (624)
T PRK12582 80 KVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKP 158 (624)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCC
Confidence 578888876665544433 2677889888887743 2334667888889998888754 22 3788888888888
Q ss_pred ceEEec
Q 012015 283 THAAVT 288 (473)
Q Consensus 283 t~~~~~ 288 (473)
..++..
T Consensus 159 ~~vi~~ 164 (624)
T PRK12582 159 RVVFAQ 164 (624)
T ss_pred cEEEec
Confidence 877764
No 297
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=23.93 E-value=2.2e+02 Score=24.30 Aligned_cols=44 Identities=7% Similarity=0.036 Sum_probs=28.6
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHH
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~l 113 (473)
.-+||.|+.+++.++|..+.+.+ +.-..|.+...++--.++..+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~~--~~~~~vivgi~~Gg~~fa~~L 53 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASDY--AGKSPVVLGVATGAFMFLADL 53 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHHc--CCCCcEEEEEccCCHHHHHHH
Confidence 46899999999999999998732 212234444445544444433
No 298
>PRK06382 threonine dehydratase; Provisional
Probab=23.86 E-value=4.4e+02 Score=25.75 Aligned_cols=55 Identities=5% Similarity=-0.006 Sum_probs=41.5
Q ss_pred EEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH
Q 012015 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (473)
Q Consensus 99 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (473)
.+....+..-..+.++|...|..+..+=|...+......++..+++++++.....
T Consensus 76 vv~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~ 130 (406)
T PRK06382 76 VITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYD 130 (406)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHH
Confidence 3455667777778889999998777666666666667779999999999887543
No 299
>PRK05939 hypothetical protein; Provisional
Probab=23.75 E-value=3.7e+02 Score=26.17 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=28.1
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 148 (473)
+++||.|.+.-..-......+-++-+.|+.+..++.. +.+.++..+.. +.++|++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~v 137 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFV 137 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEE
Confidence 4677776653321112222223345567776666543 45566665542 4555554
No 300
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=23.70 E-value=4e+02 Score=26.07 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=46.0
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecC--CCCCCHHHHHHHHhhcCCeEEEE
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA--NPVNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~ 148 (473)
=+|-+|+.++.=.....+.+..+..+||-+... +|.++.+.....|...+..+.-.
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~ 87 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAW 87 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEe
Confidence 458999999999999999999999999976554 77778888888888888886643
No 301
>PRK09088 acyl-CoA synthetase; Validated
Probab=23.65 E-value=6.5e+02 Score=24.90 Aligned_cols=78 Identities=13% Similarity=-0.043 Sum_probs=55.3
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|.+.+...+......+ .+..+++++...++-... .+...+.++..|+..+.+. ....+.+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 478888866655443333 256778888877766543 2355688888998888775 467888999999999988876
Q ss_pred cH
Q 012015 288 TP 289 (473)
Q Consensus 288 ~P 289 (473)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 54
No 302
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=23.55 E-value=5.7e+02 Score=26.01 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=26.8
Q ss_pred CCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCC----HHHHHHHHhh
Q 012015 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNT----ESEISRQIQL 140 (473)
Q Consensus 94 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~l~~~l~~ 140 (473)
.|.+|+|+...+..+-++-|- ..+|+.++.+-.... .++++.+++.
T Consensus 362 ~GKrvaI~gdpd~~~~l~~fL-~ElGmepv~v~~~~~~~~~~~~l~~ll~~ 411 (515)
T TIGR01286 362 HGKRFAIYGDPDFVMGLVRFV-LELGCEPVHILCTNGTKRWKAEMKALLAA 411 (515)
T ss_pred cCceEEEECCHHHHHHHHHHH-HHCCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 588999998654433333333 378998765533332 3445555554
No 303
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.34 E-value=7.3e+02 Score=24.54 Aligned_cols=84 Identities=11% Similarity=0.070 Sum_probs=59.0
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcH-HHHHHHHHHhCCeEecCCCC--CCHHHHHHHHhhcCCe
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANPV--NTESEISRQIQLSNPV 144 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~ 144 (473)
..+|++.+...+...+.. .++..++++....+-+... +..+++.+..|+..+..+.. .+...+...+++.++.
T Consensus 161 v~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t 236 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED----FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPIN 236 (503)
T ss_pred EEeehHHHHHHHHHHHHH----cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCe
Confidence 468999888766655433 5667888877776654332 34556788889988877653 3567778888999998
Q ss_pred EEEEccchHHH
Q 012015 145 IAFATSSVVHK 155 (473)
Q Consensus 145 ~ii~~~~~~~~ 155 (473)
.+...+.....
T Consensus 237 ~~~~~p~~~~~ 247 (503)
T PRK04813 237 VWVSTPSFADM 247 (503)
T ss_pred EEEeChHHHHH
Confidence 88887766544
No 304
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=23.28 E-value=6.9e+02 Score=25.43 Aligned_cols=100 Identities=7% Similarity=0.066 Sum_probs=61.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcC------CCCCCEEEEEeCCCC---cHHHHHHHHHHhC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTR------LSKNDTAFVLSTNSI---EIPILYFSLLSLG 119 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g------~~~gd~V~i~~~~~~---~~~~~~lA~~~~G 119 (473)
++.+|++.. .+| ..+|++.+...+..+...+.. .+ +..++.+.+..-.-. .+....+.++..|
T Consensus 206 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g 284 (562)
T PRK12492 206 LDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQ-LGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSG 284 (562)
T ss_pred cCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhc-ccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcC
Confidence 456666542 233 468899998888777777653 33 456665544422211 2222344556677
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
...+.+....+...+...++..++.++...+.....+
T Consensus 285 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 321 (562)
T PRK12492 285 NHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVAL 321 (562)
T ss_pred ceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHH
Confidence 7666554445677778888999999888776665544
No 305
>PRK13382 acyl-CoA synthetase; Provisional
Probab=22.63 E-value=5.4e+02 Score=26.04 Aligned_cols=81 Identities=14% Similarity=0.017 Sum_probs=56.7
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEecC-CCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|...+...+..+...+ .+..+++++...++-.-. .+..++..+..|+..+.+.+ ...+.+...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 467777765554444332 256778888887765433 34667888889999888754 57788999999999999887
Q ss_pred cHHHH
Q 012015 288 TPPIV 292 (473)
Q Consensus 288 ~P~~~ 292 (473)
.....
T Consensus 147 ~~~~~ 151 (537)
T PRK13382 147 DEEFS 151 (537)
T ss_pred chhhH
Confidence 65543
No 306
>PLN02356 phosphateglycerate kinase
Probab=22.48 E-value=4.7e+02 Score=25.78 Aligned_cols=56 Identities=9% Similarity=-0.044 Sum_probs=42.1
Q ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 012015 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (473)
Q Consensus 93 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (473)
++|..|. ....+..-+..-++|...|..++.+-|...+.+....++..++++++++
T Consensus 102 ~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 102 FPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred CCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3665544 4556677888888999999877766666656666788999999999985
No 307
>PRK06145 acyl-CoA synthetase; Validated
Probab=22.44 E-value=7.7e+02 Score=24.43 Aligned_cols=97 Identities=8% Similarity=0.090 Sum_probs=64.6
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC--cHHHHHHHHHHhCCeEecCC
Q 012015 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (473)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 126 (473)
++.+|++. +.+| ..+|+..+...+. ..... .++..++++....+-.. .+....++++..|+..+..
T Consensus 148 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~---~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~- 222 (497)
T PRK06145 148 PTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI---DHVIA-LGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH- 222 (497)
T ss_pred ccceEEEEeCCCCCCCCcEEEEecHHHHHHHH---HHHHh-hCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-
Confidence 56777543 2223 4688888865433 23344 68899999887765432 2223345667778876655
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccchHHHHh
Q 012015 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (473)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (473)
+..++..+...+++.++.++...+.....+.
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll 253 (497)
T PRK06145 223 REFDPEAVLAAIERHRLTCAWMAPVMLSRVL 253 (497)
T ss_pred CcCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 4578888889999999999988877665553
No 308
>PRK08638 threonine dehydratase; Validated
Probab=22.41 E-value=4.5e+02 Score=24.84 Aligned_cols=55 Identities=9% Similarity=-0.048 Sum_probs=41.8
Q ss_pred EEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEccchH
Q 012015 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (473)
Q Consensus 99 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (473)
.+....+..-...-++|...|..+..+-|...+......++..++++++++....
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 132 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFN 132 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHH
Confidence 3445667778888889999998777666665566677788999999999876544
No 309
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=22.23 E-value=2.7e+02 Score=23.12 Aligned_cols=20 Identities=15% Similarity=0.195 Sum_probs=18.5
Q ss_pred ecHHHHHHHHHHHHHHhHHh
Q 012015 70 VSFSEFTRRTNSLASYLQNV 89 (473)
Q Consensus 70 ~Ty~el~~~~~~la~~L~~~ 89 (473)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999873
No 310
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=22.15 E-value=4.3e+02 Score=26.88 Aligned_cols=82 Identities=10% Similarity=-0.062 Sum_probs=58.9
Q ss_pred hhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEE
Q 012015 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (473)
Q Consensus 210 V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 286 (473)
..+|.+.+...+..+...+ .+..+++++...++-.. ..+...+..+..|+..+.++ .+..+.+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVL-QYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 3578888876665554433 25677888877766543 22356688899999988775 45788899999999999988
Q ss_pred ecHHHH
Q 012015 287 VTPPIV 292 (473)
Q Consensus 287 ~~P~~~ 292 (473)
......
T Consensus 126 ~~~~~~ 131 (557)
T PRK07059 126 VLENFA 131 (557)
T ss_pred EchhhH
Confidence 766543
No 311
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=22.11 E-value=2.6e+02 Score=26.52 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=42.8
Q ss_pred HhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 85 YLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 85 ~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
.|++ .++++|++|+|..--+.-..+..+|-.. |+.++-++-+. +-....++.+++.++...
T Consensus 158 alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 3455 6899999999998668888888887754 47777665433 333455667777777643
No 312
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=21.69 E-value=2.7e+02 Score=21.28 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=29.3
Q ss_pred HHHHHhHHhcCCCCCCEEEEEeCC-CCcHHHHHHHHHHhCCe
Q 012015 81 SLASYLQNVTRLSKNDTAFVLSTN-SIEIPILYFSLLSLGVI 121 (473)
Q Consensus 81 ~la~~L~~~~g~~~gd~V~i~~~~-~~~~~~~~lA~~~~G~~ 121 (473)
.+.+.+.+ .++.++..|.++|.. +.....+...+...|..
T Consensus 66 ~~~~~~~~-~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGS-LGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHH-cCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 34445556 688889999999988 47776677777777853
No 313
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.55 E-value=6.1e+02 Score=25.81 Aligned_cols=99 Identities=8% Similarity=0.077 Sum_probs=59.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCC---cHHHHHHHHHHhCCeEecC
Q 012015 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI---EIPILYFSLLSLGVIISPA 125 (473)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~---~~~~~~lA~~~~G~~~v~l 125 (473)
++++|++.. .|| ..+|...+...+......+. ..+..++.+.+..-... .+....++.+..|...+..
T Consensus 206 ~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~ 283 (562)
T PRK05677 206 ADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG--SNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILI 283 (562)
T ss_pred ccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc--cCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 677777643 233 35788888766655544332 24455554544322221 2233455667778776666
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccchHHHH
Q 012015 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (473)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (473)
........+...+++.++..+...+.....+
T Consensus 284 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 314 (562)
T PRK05677 284 SNPRDLPAMVKELGKWKFSGFVGLNTLFVAL 314 (562)
T ss_pred cCcccHHHHHHHHHHcCceEEecHHHHHHHH
Confidence 5556778888889999999887766555433
No 314
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=21.47 E-value=3.2e+02 Score=20.56 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=33.3
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEe
Q 012015 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (473)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 123 (473)
..+.+.++.+ .+.+ .+..+.+.|.++|.++...-.+...+.+.|..-+
T Consensus 41 iniP~~~l~~-------~l~~-l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v 88 (104)
T PRK10287 41 INIPLKEVKE-------RIAT-AVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHA 88 (104)
T ss_pred EECCHHHHHH-------HHHh-cCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeE
Confidence 3566665543 3444 5556677899999988887777788888886544
No 315
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=21.42 E-value=4.7e+02 Score=25.23 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=35.8
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC--C----CCHHHHHHHHhhc------CCeEEEEc
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP--V----NTESEISRQIQLS------NPVIAFAT 149 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~ii~~ 149 (473)
+++||.|.+. ...+...+.++...|+.++.++. + .+.+.+...++.. ++++|++.
T Consensus 99 ~~~gd~Vlv~---~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLD---GLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEEC---CCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 3688987664 23444445567778988777654 2 4678888877643 57766654
No 316
>PLN02479 acetate-CoA ligase
Probab=20.93 E-value=5.8e+02 Score=26.01 Aligned_cols=81 Identities=7% Similarity=-0.052 Sum_probs=58.5
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|...+...+..+...+ .+..+++++....+-.- -.+...+..+..|+..+.+. .+..+.+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 467777766555544433 26788888888777543 23356778888998888875 467889999999999999988
Q ss_pred cHHHH
Q 012015 288 TPPIV 292 (473)
Q Consensus 288 ~P~~~ 292 (473)
.+..+
T Consensus 124 ~~~~~ 128 (567)
T PLN02479 124 DQEFF 128 (567)
T ss_pred chhhh
Confidence 76653
No 317
>PF09312 SurA_N: SurA N-terminal domain; InterPro: IPR015391 The correct folding of outer membrane proteins in Gram negative bacteria is facilitated by the survival protein SurA []. This entry represents the domain found at the N terminus of the chaperone SurA. It is a helical domain of unknown function. The C terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. ; PDB: 3RGC_B 2PV3_B 1M5Y_A.
Probab=20.91 E-value=2e+02 Score=22.24 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=23.6
Q ss_pred CCcEEEECCCCceecHHHHHHHHHHHHHHhHH
Q 012015 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQN 88 (473)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~ 88 (473)
|+++.+.. +.-+|+.||.+++..+...+..
T Consensus 2 D~IvAvVn--~eiIt~sel~~~~~~~~~~~~~ 31 (118)
T PF09312_consen 2 DRIVAVVN--DEIITQSELEQRLAQLKAQIQQ 31 (118)
T ss_dssp --EEEEES--SSEEEHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEC--CcCcCHHHHHHHHHHHHHHHHh
Confidence 46666666 8999999999999988887765
No 318
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=20.64 E-value=1.8e+02 Score=24.40 Aligned_cols=76 Identities=5% Similarity=0.069 Sum_probs=40.4
Q ss_pred cCeEEEecCCCHHHHHHHHHHcccceEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC-HHHHHHHHHhCCCCeEE
Q 012015 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG-KDTIMAFASKFPKVVLV 337 (473)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~-~~~~~~~~~~~~~~~~~ 337 (473)
.+.+++.+......+.+.+ ..++..-..-+.++..+++..... ..+..+.||.+-. .+..+.+++.+|+..+.
T Consensus 5 ~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~iv 78 (172)
T PF03808_consen 5 SADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLRIV 78 (172)
T ss_pred hCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeEEE
Confidence 4455555443334444444 333323334444555555543322 2466777776533 45666788888888776
Q ss_pred eec
Q 012015 338 QAY 340 (473)
Q Consensus 338 ~~y 340 (473)
-.+
T Consensus 79 g~~ 81 (172)
T PF03808_consen 79 GYH 81 (172)
T ss_pred Eec
Confidence 544
No 319
>PRK13391 acyl-CoA synthetase; Provisional
Probab=20.54 E-value=8.6e+02 Score=24.26 Aligned_cols=95 Identities=14% Similarity=-0.010 Sum_probs=62.9
Q ss_pred CCCEEEEEccCCCCCCcchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-C
Q 012015 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-R 267 (473)
Q Consensus 191 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~ 267 (473)
++.++.+...++ -.+|.+.+...+..+...+ .+..+++++....+-... .+..++..+..|+..+.+. .
T Consensus 11 p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 11 PDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred CCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEeccccc
Confidence 455565544332 2377777765554444333 256677877776665432 2356778888999888775 4
Q ss_pred CCHHHHHHHHHHcccceEEecHHHHH
Q 012015 268 FDLKMMLKAVEEFRVTHAAVTPPIVV 293 (473)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~ 293 (473)
.....+...+++.++..+...+....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~ 108 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLD 108 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHH
Confidence 67888999999999999888776544
No 320
>PRK06178 acyl-CoA synthetase; Validated
Probab=20.45 E-value=5.3e+02 Score=26.24 Aligned_cols=85 Identities=9% Similarity=-0.036 Sum_probs=59.9
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHhHHHHHHHhhhcCeEEEec-CCCHHHHHHHHHHcccceEEe
Q 012015 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (473)
Q Consensus 211 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~~~~g~~~~l~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (473)
.+|...+...+......+ .+..+++++....+-... .+...+..+..|+..+.+. ......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 467777766555443322 256777888777666543 3356778888898888765 467889999999999999998
Q ss_pred cHHHHHHHh
Q 012015 288 TPPIVVAMS 296 (473)
Q Consensus 288 ~P~~~~~l~ 296 (473)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887665443
No 321
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.45 E-value=1.2e+02 Score=26.69 Aligned_cols=31 Identities=10% Similarity=0.045 Sum_probs=23.0
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHHhhcC
Q 012015 112 YFSLLSLGVIISPANPVNTESEISRQIQLSN 142 (473)
Q Consensus 112 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 142 (473)
+=++.++|+.+++|++..+.+.+..+++..+
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 4467889999999999999999999998765
No 322
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=20.28 E-value=2.6e+02 Score=25.03 Aligned_cols=92 Identities=14% Similarity=0.241 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC--CCCHH---HHHHHHhhcCCeEEE
Q 012015 73 SEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP--VNTES---EISRQIQLSNPVIAF 147 (473)
Q Consensus 73 ~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~---~l~~~l~~~~~~~ii 147 (473)
+++.++.+.+...+.+...-.++ +..+...+...++.-.+++-..+.. -..+ ..++. ++...++..++++||
T Consensus 128 ~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 128 EKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 44444555555555442222233 5667777889988888877666544 1222 33444 455666889999999
Q ss_pred EccchHHH----H-hcCCCeEEEEc
Q 012015 148 ATSSVVHK----L-AKLKHRTILID 167 (473)
Q Consensus 148 ~~~~~~~~----~-~~~~~~~~~~~ 167 (473)
+++....+ + .+.+.+++.++
T Consensus 205 ~e~~~~~~~~~~la~~~g~~vv~ld 229 (256)
T PF01297_consen 205 TEPQFSSKLAEALAKETGVKVVYLD 229 (256)
T ss_dssp EETTS-THHHHHHHHCCT-EEEESS
T ss_pred ecCCCChHHHHHHHHHcCCcEEEeC
Confidence 87654433 2 23455554444
No 323
>PRK05638 threonine synthase; Validated
Probab=20.25 E-value=3.2e+02 Score=27.12 Aligned_cols=90 Identities=12% Similarity=-0.020 Sum_probs=53.3
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 012015 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (473)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 137 (473)
++.+-....+-+-||++=- ....+...+ + .| .+.| +....+..-..+-..+.++|..+..+-|...+......
T Consensus 81 ~l~~K~E~~nPtGSfKdR~-a~~~i~~a~-~-~g---~~~v-v~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~ 153 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRL-ATVAVSYGL-P-YA---ANGF-IVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQ 153 (442)
T ss_pred eEEEEeCCCCCCCChHHHH-HHHHHHHHH-H-cC---CCEE-EEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH
Confidence 4555555445566666622 222233233 3 23 2344 44566777777777778889865555444445555677
Q ss_pred HhhcCCeEEEEccchHH
Q 012015 138 IQLSNPVIAFATSSVVH 154 (473)
Q Consensus 138 l~~~~~~~ii~~~~~~~ 154 (473)
++..+++++.++....+
T Consensus 154 ~~~~GA~vi~v~~~~~~ 170 (442)
T PRK05638 154 MIAFGAKIIRYGESVDE 170 (442)
T ss_pred HHhcCcEEEEECCCHHH
Confidence 88899999999765443
No 324
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=20.17 E-value=6.2e+02 Score=23.91 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=30.1
Q ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHhCCeEecCCC----CCCHHHHHHHHhhcCCeEEEE
Q 012015 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP----VNTESEISRQIQLSNPVIAFA 148 (473)
Q Consensus 92 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~ii~ 148 (473)
+++||.|++-.| .+.....++-..|+.+++++. ..+.+.+...+...++++++.
T Consensus 97 ~~~gd~Vlv~~p---~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l 154 (351)
T PRK14807 97 INKGDVVIYPHP---SFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFL 154 (351)
T ss_pred cCCCCEEEEeCC---ChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 367788776533 233334445566776555532 245566666665556666653
No 325
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.09 E-value=3.6e+02 Score=20.57 Aligned_cols=38 Identities=11% Similarity=-0.049 Sum_probs=31.1
Q ss_pred HHHHHhCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcc
Q 012015 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (473)
Q Consensus 113 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (473)
..+-..|..++.+.++.+.+++...+.+.+|++|..+.
T Consensus 21 ~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 21 RALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 33445788888889999999999999999999887653
No 326
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.05 E-value=1e+02 Score=20.30 Aligned_cols=19 Identities=42% Similarity=0.777 Sum_probs=13.7
Q ss_pred cCceEEEccCCcEEEEecc
Q 012015 422 TGDLCYIDEDGFLFIVDRL 440 (473)
Q Consensus 422 TgD~~~~~~~g~l~~~GR~ 440 (473)
-|.+.|.++||.+.+.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567788888888888763
Done!