Your job contains 1 sequence.
>012016
MDTSATSAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFS
SQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVD
VFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAK
SVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVK
RKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLV
ATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDER
IIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGIKEHILFEEIEELIS
TTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRKIHEESTESQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012016
(473 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 1453 1.4e-157 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 1301 1.0e-132 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 1082 1.6e-109 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 1057 7.2e-107 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 1047 8.3e-106 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 1023 2.9e-103 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 1007 1.4e-101 1
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 849 1.5e-89 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 598 7.2e-88 2
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 839 9.2e-86 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 848 1.0e-84 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 568 1.3e-84 2
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 838 1.2e-83 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 821 7.4e-82 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 821 7.4e-82 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 790 4.0e-81 2
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 790 5.1e-81 2
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 811 8.5e-81 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 801 9.7e-80 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 796 3.3e-79 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 796 3.3e-79 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 646 2.6e-63 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 578 4.2e-56 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 382 2.4e-35 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 346 1.6e-31 1
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 333 3.8e-30 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 327 1.6e-29 1
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 324 3.4e-29 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 321 7.1e-29 1
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 321 7.1e-29 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 319 1.2e-28 1
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 313 5.1e-28 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 307 8.2e-27 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 312 5.1e-26 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 303 6.6e-26 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 302 1.1e-25 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 304 1.8e-25 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 303 2.7e-25 1
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 303 6.9e-25 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 187 1.8e-24 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 292 9.5e-24 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 204 4.8e-23 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 282 8.4e-23 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 282 4.2e-22 1
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 268 1.8e-21 2
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 251 6.6e-21 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 242 6.5e-20 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 194 1.3e-19 2
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 178 1.8e-19 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 250 1.1e-18 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 250 1.1e-18 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 195 9.3e-15 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 193 1.5e-14 1
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 212 3.0e-14 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 184 1.7e-11 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 184 2.0e-11 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 184 2.8e-11 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 184 2.8e-11 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 184 2.8e-11 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 184 2.8e-11 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 184 2.8e-11 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 184 2.8e-11 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 184 2.8e-11 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 184 2.8e-11 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 183 3.6e-11 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 187 3.6e-11 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 183 3.6e-11 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 182 4.7e-11 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 180 6.3e-11 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 176 2.2e-10 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 176 2.2e-10 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 175 2.3e-10 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 175 2.9e-10 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 174 3.0e-10 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 179 3.1e-10 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 173 3.9e-10 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 176 4.1e-10 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 171 7.1e-10 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 171 7.1e-10 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 171 8.7e-10 1
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 149 9.2e-10 1
POMBASE|SPCC576.10c - symbol:rpt3 "19S proteasome regulat... 169 9.9e-10 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 169 1.0e-09 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 169 1.0e-09 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 170 1.1e-09 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 170 1.1e-09 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 171 1.2e-09 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 168 1.4e-09 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 173 1.5e-09 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 173 1.5e-09 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 168 1.7e-09 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 168 1.7e-09 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 168 1.7e-09 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 170 1.8e-09 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 167 1.8e-09 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 167 1.8e-09 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 167 1.8e-09 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 167 1.8e-09 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 167 1.8e-09 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 167 1.8e-09 1
WARNING: Descriptions of 368 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 1453 (516.5 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 279/472 (59%), Positives = 365/472 (77%)
Query: 3 TSATSAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQ 62
+ ++SAE++LATAKT+L+TAASVAAT MLAR++ +D LP E+ Y + R FSSQ
Sbjct: 46 SDSSSAESRLATAKTVLTTAASVAATAMLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQ 105
Query: 63 LTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVF 122
+TI+I+E +G A N++++AA+ YL K SPS +RIKVSK EKEN+ N+++E DE+VVD +
Sbjct: 106 MTIIIEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTY 165
Query: 123 NGIKLKWVLVCRQVESRSFNHS---STNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEA 179
NG+K +W+L CR VES+ F++ ++ ++++VR FEL F KK+KDV + SYLP + K A
Sbjct: 166 NGVKFQWILHCRHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPFMVKRA 225
Query: 180 KSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFV 239
++QE KT+KI T++ N+Y N++DAW V LDHP+TF+TLAM+ + KT +M+DL++FV
Sbjct: 226 TLMKQEKKTLKIFTLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFV 285
Query: 240 KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLL 299
KR+D+Y+RVGKAWKRGYLLYGPPGTGKSSLIAAMAN+LNFD+YDLELT + +NS+LR LL
Sbjct: 286 KRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLL 345
Query: 300 VATANRSILVVEDIDCTIDLQDRL---PADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSC 356
+ATANRSIL+VEDIDC+++L+DR P + + E P + KVTLSG LNFIDGLWSSC
Sbjct: 346 IATANRSILIVEDIDCSLELKDRTSDEPPRESDDIEDP-RYKKVTLSGLLNFIDGLWSSC 404
Query: 357 GDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXX 416
GDERII+FTTN+KEKLD ALLRPGRMD+H+HMSYCTPS FK LA NYL
Sbjct: 405 GDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYLEIKEHRLFSKIE 464
Query: 417 XXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRKIHEE 468
T+VTPAEVAEQLMRND + VL GLIEFLKVK+ E+E K + +E
Sbjct: 465 EGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVKKIENEQDKAKTEKQE 516
Score = 104 (41.7 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 421 TTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRKIHEE 468
T V EV EQL+RND + VL GL+E LK K+ ED+ K + HEE
Sbjct: 527 TDSVVKKEVDEQLVRNDRVDKVLEGLVELLKAKKIEDDQDKAK--HEE 572
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
Identities = 251/456 (55%), Positives = 347/456 (76%)
Query: 5 ATSAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLT 64
++S+E+ LATAKT L+ ASVAA +LAR+V +D +P E+ +Y R+F + FS Q+T
Sbjct: 2 SSSSESHLATAKTALTAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMT 61
Query: 65 IVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNG 124
VI+E G NQ+++AA+ YL K S S +RIKV+KLEK+++ ++++E DE+VVD+F+G
Sbjct: 62 AVIEEFGGFEHNQVFEAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDG 121
Query: 125 IKLKWVLVCRQVESRSFNHS---STNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKS 181
+KL W+LVCR V+ + F + ++ ++++VR +EL+F KK+K++V+ SYLP V ++A S
Sbjct: 122 VKLSWILVCRHVDKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAAS 181
Query: 182 VQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKR 241
++Q+ KT+KI TV+ +++ W V LDHP+TF TLA++ E K +++DL+RFV+R
Sbjct: 182 IKQKFKTLKIFTVD------SYSVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQR 235
Query: 242 KDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVA 301
K +Y RVGKAWKRGYLLYGPPGTGKSSLIAA+AN+LNFD+YDL+LT L +N++LR LL++
Sbjct: 236 KGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMS 295
Query: 302 TANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERI 361
TANRSILVVEDIDC+I+L+DR D E P+ + VTLSG LNF+DGLWSSCG+ERI
Sbjct: 296 TANRSILVVEDIDCSIELKDR-STD--QENNDPLHKT-VTLSGLLNFVDGLWSSCGNERI 351
Query: 362 IVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXST 421
IVFTTN++EKLDPALLRPGRMD+H+HMSYCTP+ FK+LA+NYL
Sbjct: 352 IVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVLASNYLEIQDHILFEQIEEFIRE 411
Query: 422 TQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKED 457
+VTPAEVAEQLMR+D + VL GL+EFLK K++ D
Sbjct: 412 IEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAKKQID 447
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 221/456 (48%), Positives = 313/456 (68%)
Query: 17 TILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHDGLAKN 76
++ S AS+ +ML R++ D +P +++ YF L +F S LT++IDE+ GL +N
Sbjct: 13 SLFSAYASLTGFLMLFRSMLHDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRN 72
Query: 77 QIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQV 136
Q++DAA++YL K P +R++V K+ K+ H IS+E E+++D F ++KW V
Sbjct: 73 QVFDAAEMYLRSKIGPETERLRVGKIPKQKHFTISIERGEEILDTFEESEVKWSYV---- 128
Query: 137 ESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNY 196
+S N ++ RY+ELTF KK +D V+ SYL V E++ +++ + +K+ +
Sbjct: 129 --QSENEKGDKVK---RYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYS--- 180
Query: 197 NNLYCNWTDA------WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGK 250
++Y + D W +NL+HP+TF+TLAM+ K KI+ DLERF+KRK++Y+RVGK
Sbjct: 181 RDVYASDDDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGK 240
Query: 251 AWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVV 310
AWKRGYLLYGPPGTGKSSLIAAMANYL FDV+DLEL+ + N +L+ +L++T NRSILV+
Sbjct: 241 AWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVI 300
Query: 311 EDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKE 370
EDIDC +++DR + + + I+ KVTLSG LNFIDGLWSS GDERIIVFTTNHKE
Sbjct: 301 EDIDCNAEVRDR---EAENQEDEQIK-GKVTLSGILNFIDGLWSSFGDERIIVFTTNHKE 356
Query: 371 KLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXX--XXXXXXSTTQVTPAE 428
+LDPALLRPGRMDVH++MSYCT GF+ L +NYLG +T+VTPAE
Sbjct: 357 RLDPALLRPGRMDVHINMSYCTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAE 416
Query: 429 VAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRK 464
+AE+LM++DD ++VL G+I F++ KRK E +K +K
Sbjct: 417 LAEELMQDDDTDVVLRGVISFVE-KRKV-ERSKTKK 450
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 211/468 (45%), Positives = 306/468 (65%)
Query: 12 LATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRK-FCNRFSSQLTIVIDEH 70
L + ++ + AS+A +M+ R++A +L+P +QD+ Y LR F SS LT+ ID+
Sbjct: 7 LPSPTSVFTAYASMAGYMMMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDD 66
Query: 71 DGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWV 130
+ N+IY AA+ YL K SP R+++SK K+ HVN+ + E V DV+ ++L W
Sbjct: 67 NMGMNNEIYRAAQTYLSTKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWR 126
Query: 131 LVCRQVESRSFN------------HSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKE 178
V + + + + YFEL+F KK+KD+++ SY+P +E +
Sbjct: 127 FVTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNSYVPYIESK 186
Query: 179 AKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERF 238
AK ++ E + + + ++N +L W V L+HP+TFET+AME + K +++DL+RF
Sbjct: 187 AKEIRDERRILMLHSLN--SL------RWESVILEHPSTFETMAMEDDLKRDVIEDLDRF 238
Query: 239 VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTL 298
++RK++Y+RVGKAWKRGYLLYGPPGTGKSSL+AAMANYL FDVYDL+L + +SDLR L
Sbjct: 239 IRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRL 298
Query: 299 LVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGD 358
L+AT NRSILV+EDIDC +DL +R+ + G+ G Q +TLSG LNFIDGLWSSCGD
Sbjct: 299 LLATRNRSILVIEDIDCAVDLPNRIEQPVEGKNRGE-SQGPLTLSGLLNFIDGLWSSCGD 357
Query: 359 ERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXX 418
ERII+FTTNHK++LDPALLRPGRMD+H++M +C+ GFK LA+NYLG
Sbjct: 358 ERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDAAMPHRLFPE 417
Query: 419 XSTT----QVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKP 462
+TPA+VAE+LM+++D ++ L GL+ L+ R + +++ P
Sbjct: 418 IERLIDGEVMTPAQVAEELMKSEDADVALEGLVNVLEKMRLKSKESNP 465
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 221/470 (47%), Positives = 311/470 (66%)
Query: 7 SAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIV 66
S N + ++ + AS+ +ML R++ D +P ++ Y L +F S LT+V
Sbjct: 4 SISNISLSPSSLFTAYASLTGFLMLFRSLFNDEVPERLRSYITDLLNRFFTPKSKNLTMV 63
Query: 67 IDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIK 126
IDE G +NQ++DAA+VYL K P R++V KL K+ H I +E E+++D F +
Sbjct: 64 IDEIIGFKRNQVFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSE 123
Query: 127 LKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQES 186
L+W V ES N +S Q + RY+ELTF KK +D V+ SYL V E++ +++
Sbjct: 124 LRWTYV----ESE--NEAS---QKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDL 174
Query: 187 KTIKILT--VNYNNLYCNWTDA-WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKD 243
+ +K+ + V + A W +NL+HP+TFETLAM+ K KI+ D+ERF+KR++
Sbjct: 175 RAVKLYSRDVRASKDDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRRE 234
Query: 244 YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATA 303
+Y+RVGKAWKRGYLLYGPPGTGKSSLIAAMANYL FDV+DLEL+ + N+ L+++L++T
Sbjct: 235 FYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTT 294
Query: 304 NRSILVVEDIDCT-IDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERII 362
NRSILV+EDIDC+ ++ DR + EG +VTLSG LNF+DGLWSS GDERII
Sbjct: 295 NRSILVIEDIDCSSAEVVDREADEYQEYEEG--YYGRVTLSGLLNFVDGLWSSFGDERII 352
Query: 363 VFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXX--XXXXXXS 420
VFTTNHKE+LDPALLRPGRMD+H++MSYCT GF+ L +NYLG
Sbjct: 353 VFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLGGLNHPLCEEIEALID 412
Query: 421 TTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRKIHEEST 470
+T+VTPAE+AE+LM+ DD ++VL G++ F V+ ++ E +K +++ E ST
Sbjct: 413 STEVTPAELAEELMQEDDTDVVLRGVVSF--VENRKVEISKTKEL-EGST 459
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 207/465 (44%), Positives = 303/465 (65%)
Query: 17 TILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHDGL-AK 75
++ ST AS+ VM+ + + ++P +Q++ + L+ F SS LT+ ID+ +
Sbjct: 12 SMFSTYASMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSSMYIP 71
Query: 76 NQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQ 135
+++Y AA+ YL K SP+ R+ +++ E V + + E V DV+NGIKLKW + R
Sbjct: 72 DELYAAAQAYLSTKISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLARN 131
Query: 136 VESRSFNHSSTNIQAQVRY--FELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILT 193
+ + Q ++ EL+F KK++D+V+ SY+P VE +AK V + + +K+
Sbjct: 132 KNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKM-- 189
Query: 194 VNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWK 253
+ Y + W VN HP+TF+T+AM + K +++DL+RFV RKD+Y+RVGKAWK
Sbjct: 190 ----HCYSHMAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWK 245
Query: 254 RGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDI 313
RGYLLYGPPGTGKSSL+AAMANYL FD+YDL+L ++ ++ LR+LL+AT N SIL++EDI
Sbjct: 246 RGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDI 305
Query: 314 DCTIDLQDRL-PADIAGEGEGPIQQNK-VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEK 371
DC++DL RL P + G +Q +K +TLSG LN IDGLWSSCG+ERII+FTTN+KEK
Sbjct: 306 DCSVDLPTRLQPPTETSQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEK 365
Query: 372 LDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXX-----XXXXXSTTQVTP 426
LDPALLRPGRMD+H++M +C+ GFK LA+NYLG +TP
Sbjct: 366 LDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLIDGHVLTP 425
Query: 427 AEVAEQLMRNDDPELVLNGLIEFLKVKRKE----DEDAKPRKIHE 467
A+VAE+LM+++D + L GL++ LK KR E D+++K +K+ E
Sbjct: 426 AQVAEELMKDEDADAALEGLVKVLKRKRLEPKKCDDESKMKKLKE 470
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 203/454 (44%), Positives = 292/454 (64%)
Query: 12 LATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEH- 70
L + +S AS+ VM+ + +P +Q+Y L F + S LT++ID+H
Sbjct: 7 LPSLAPFVSAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTLIIDDHI 66
Query: 71 -DGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKW 129
+G+ N++Y AA+VY+ K + + +R+++S+ E +VNI E V D++ GI++KW
Sbjct: 67 KNGMY-NELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKW 125
Query: 130 VLVCRQVESRSFNHSSTNIQAQV--RYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESK 187
+S ++ + + EL+F KK+ ++V+ SY+P VE +AK + E K
Sbjct: 126 RFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERK 185
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRR 247
+K+ Y+ YC W VNL+HP+TF+T+AM +E K +M DL+RF++RKD+Y+R
Sbjct: 186 ILKM----YS--YCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKR 239
Query: 248 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSI 307
VGK WKRGYLLYGPPGTGK+SL+AA+ANYL FD+YDL+L +R ++DLR LL+ T N SI
Sbjct: 240 VGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSI 299
Query: 308 LVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTN 367
L+VEDIDC +DL RL + +G + +TLSG L IDGLWSSCGDERI++FTT
Sbjct: 300 LLVEDIDCAVDLHTRLQPKTQDDTKG---SSMLTLSGLLTCIDGLWSSCGDERIVIFTTT 356
Query: 368 HKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQ---V 424
HKE+LDPALLRPGRMD+H+HM +C FK LA+NYLG + +
Sbjct: 357 HKERLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVL 416
Query: 425 TPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDE 458
TPA+VAE+LM+N+DP++ L GL++ LK KR E E
Sbjct: 417 TPAQVAEELMKNEDPDVALEGLVKVLKRKRLELE 450
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 849 (303.9 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 162/324 (50%), Positives = 227/324 (70%)
Query: 83 KVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKW-VLVCRQVESRSF 141
+ YL K SP ++++++ +VN+ + E V DV+ GI+LKW L R ++
Sbjct: 55 QAYLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTTVV 114
Query: 142 NHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYC 201
+ + FEL+F KK+KD+V+ SY+ VE++AK +++E + IK+ + Y
Sbjct: 115 GEETEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKM------HSYS 168
Query: 202 NWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGP 261
++T W V +HP+TF T+AM + K+ +M+DL+RF+KRKDYY+RVGKAWKR Y LYGP
Sbjct: 169 SYTLRWQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGP 228
Query: 262 PGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQD 321
PGTGKSSL+AAMANYL FD+YDL+L ++ ++ LR+LL+AT N SIL+VEDIDC++DL
Sbjct: 229 PGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDLPT 288
Query: 322 RLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGR 381
RL G P +TLSG LN IDGLWSSCGDERI++FTTN+KE LDPALLRPG
Sbjct: 289 RLQPATTTLG-APKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGC 347
Query: 382 MDVHVHMSYCTPSGFKLLAANYLG 405
MD+H+++ +C+ GFK+LA+NYLG
Sbjct: 348 MDMHIYLGHCSFEGFKILASNYLG 371
Score = 64 (27.6 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 12 LATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKF 55
L + T+ ST AS+A +M+ + + ++P IQ++ + ++ F
Sbjct: 7 LPSPATMFSTYASLAGYIMMIKPMIHTIIPRPIQNFVFSYIKSF 50
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 598 (215.6 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 123/297 (41%), Positives = 189/297 (63%)
Query: 27 ATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHD---GLAKNQIYDAAK 83
A++M +V R +PY+I+DY K S+ + I E+ GL K+Q YD +
Sbjct: 16 ASLMFFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIR 75
Query: 84 VYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNH 143
YL K++ QR+K ++ + + +S+++ E V DVF G+K+ W L + ++
Sbjct: 76 NYLSSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSLSVWKSNDQA--D 133
Query: 144 SSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNW 203
SS + RY L+F +Y++++ +YL V +E K + +++ K+ T N + Y W
Sbjct: 134 SS-----EKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAW 188
Query: 204 TDA-WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPP 262
+ W V DHPATFETLAM+ E+K + +DL +F K KDYYR+VGK WKRGYLL+GPP
Sbjct: 189 REGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPP 248
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDL 319
GTGKS++I+AMAN+L +DVYDLELT ++ NS+L+ L++ T +SI+V+EDIDC++DL
Sbjct: 249 GTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDL 305
Score = 299 (110.3 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 65/136 (47%), Positives = 85/136 (62%)
Query: 336 QQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+++KVTLSG LN IDGLWS+C E+IIVFTTN+ +KLDPAL+R GRMD H+ MSYC
Sbjct: 339 RESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEA 398
Query: 396 FKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRN---DDPELVLNGLIEFLKV 452
FK+LA NYL T ++PA+VAE LM DD ++ L L++ L
Sbjct: 399 FKVLAKNYLEIESHDLFGEIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSL-- 456
Query: 453 KRKEDEDAKPRKIHEE 468
E+E K +K+ EE
Sbjct: 457 ---EEEKEKAKKLAEE 469
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 839 (300.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 187/473 (39%), Positives = 282/473 (59%)
Query: 18 ILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEH--DGLAK 75
I + + M + + +P + Y K S + I E+ +GL +
Sbjct: 7 IWGITGTTVTSFMFFWAIYKQYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKR 66
Query: 76 NQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQ 135
+Q YD+ + YL K++ +R+K ++ + + SM+ E++ D F G+K+KW +
Sbjct: 67 SQAYDSIRNYLASKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKV 126
Query: 136 VESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVN 195
++ +S N+ + + + R+F L+F ++++ ++I +YL V +E K++ ++ K+ T N
Sbjct: 127 IQPQS-NYGQRSSEER-RHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNN 184
Query: 196 YNNLYCNWTDA-WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKR 254
+ + W W V HPATFETLAM+ E+K I +DL +F K KDYY++VGK WKR
Sbjct: 185 SSQEWYPWRSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKR 244
Query: 255 GYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDID 314
GYLL+GPPGTGKS++IAA+AN+L++DVYDLELT ++ NS+L+ LL+ T ++SI+V+EDID
Sbjct: 245 GYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDID 304
Query: 315 CTIDL----QDRLPADIAGEGE----G---PI---QQNKVTLSGFLNFIDGLWSSCGDER 360
C++DL + + D +GE G P +Q+KVTLSG LN IDGLWS+C E+
Sbjct: 305 CSLDLTGQRKKKKEEDEEEDGEEKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEK 364
Query: 361 IIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXS 420
IIVFTTN +KLDPAL+R GRMD H+ MSYC FK+LA NYL
Sbjct: 365 IIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEIERKLE 424
Query: 421 TTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKEDEDAKPRKIHEESTESQ 473
T ++PA+VAE LM D E + I+ L VK E+E K RK+ EE + +
Sbjct: 425 ETDMSPADVAETLMPKSDEEDA-DICIKRL-VKTLEEEKEKARKLAEEEEKKK 475
Score = 285 (105.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 67/154 (43%), Positives = 92/154 (59%)
Query: 336 QQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+Q+KVTLSG LN IDGLWS+C E+IIVFTTN +KLDPAL+R GRMD H+ MSYC
Sbjct: 340 KQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEA 399
Query: 396 FKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLM-RND--DPELVLNGLIEFLKV 452
FK+LA NYL T ++PA+VAE LM ++D D ++ + L++ L+
Sbjct: 400 FKVLAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMPKSDEEDADICIKRLVKTLEE 459
Query: 453 -------------KRKEDEDAKPRKIHEESTESQ 473
K+K +++AK K EE+ E +
Sbjct: 460 EKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKK 493
Score = 38 (18.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 448 EFLKVKRKEDEDAKPRKIHEESTESQ 473
E K+K+ E+ + K +K E+ + +
Sbjct: 479 EAKKMKKAEEAEEKKKKTEEDEKKEK 504
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 181/418 (43%), Positives = 261/418 (62%)
Query: 54 KFCNRFSSQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISME 113
KF N FS + I E++ N +D + YLG K + + ++ S++ + + ++
Sbjct: 52 KFINFFSPYVQINFSEYEDYRVNHAFDPIETYLGAKATDKAKHLRASQVRESK--GLVLK 109
Query: 114 SDE-QVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYL 172
DE +V D + GI++ W ++E+ S + + +LTF ++ +D+V SY+
Sbjct: 110 RDETKVRDEYEGIRVWW-----EMETDSAGYKT---------LKLTFHRRSRDIVTNSYI 155
Query: 173 PCVEKEAKSVQQESKTIKILTVNYNNLYCNW----TDAWIPVNLDHPATFETLAMEQEQK 228
V +E KS+ ++K +K+ T NN +W T W ++ +HPATFETLAM+ ++K
Sbjct: 156 KYVVEEGKSIDAKNKKMKLFT---NNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKK 212
Query: 229 TKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTE 288
+I+ DL F KDYY+++GKAWKRGYLLYGPPGTGKS++IAAMAN LN+ +YDLELT
Sbjct: 213 EQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTA 272
Query: 289 LRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAG------EGEGPIQQNK--V 340
+++NS+LR +L AT+N+SI+V+EDIDC++DL + + +G+ ++NK V
Sbjct: 273 IQNNSELRKILTATSNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQDNEENKSFV 332
Query: 341 TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLA 400
TLSG LNFIDG+WS+CG ERIIVFTTNH KLDPAL+R GRMD+H+ +SYCT FK LA
Sbjct: 333 TLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLA 392
Query: 401 ANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLM---RNDDPELVLNGLIEFLKVKRK 455
NYL T + PA+VAE LM R D + LN LIE L+ K+K
Sbjct: 393 KNYLDLDSHPLFSKIESLMKETNIAPADVAENLMKKNRETDADGSLNDLIESLERKKK 450
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 568 (205.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 116/311 (37%), Positives = 193/311 (62%)
Query: 16 KTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNR----FSSQLTIVIDEHD 71
K ++ AS+ + +++ + + P E++ F KF NR FSS I E D
Sbjct: 2 KEYWTSLASLLGVLAFCQSLMQSIFPPELR----FAFLKFFNRIFHVFSSYCYFDITEID 57
Query: 72 GLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVL 131
G+ N++Y+A ++YL S + R+ +++ + + + +++ +VD FNG+ + W
Sbjct: 58 GVNTNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEH 117
Query: 132 VCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKI 191
V Q ++++F + + + R F L KK K +++ SYL + + A ++++++ +
Sbjct: 118 VVTQRQTQTF--AWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLL 175
Query: 192 LTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKA 251
T + + W V HP+TFETLAM+ +K +IM DL+ F + + +Y++ G+A
Sbjct: 176 YTNSRGGSLDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRA 235
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVE 311
WKRGYLLYGPPGTGKSS+IAAMANYL +D+YDLELTE+ SNS+LR LL+ T+++SI+V+E
Sbjct: 236 WKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIE 295
Query: 312 DIDCTIDLQDR 322
DIDC+I+L +R
Sbjct: 296 DIDCSINLTNR 306
Score = 298 (110.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 66/141 (46%), Positives = 84/141 (59%)
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G GE N +TLSG LNF DGLWS CG ERI VFTTNH EKLDPALLR GRMD+H++M
Sbjct: 334 GSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYM 393
Query: 389 SYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTT----QVTPAEVAEQLMRND-DPELVL 443
S+C K+L NYLG ++TPA+V+E L++N D E +
Sbjct: 394 SFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVEKAEMTPADVSEALIKNRRDKEKAI 453
Query: 444 NGLIEFLKVKRKED-EDAKPR 463
L+E LK + + + +D K R
Sbjct: 454 RELLEDLKSRGERNVKDGKLR 474
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 185/481 (38%), Positives = 280/481 (58%)
Query: 10 NKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFR-LRKFCNRFSSQLTIVID 68
+++ + + S S +A ML RT+ +++P I++Y + + F + F S T VI+
Sbjct: 6 SQVPSVSAVFSLYTSFSAITMLFRTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIE 65
Query: 69 EHDGLAKNQIYDAAKVYLGKKTSP-SVQRIKVSKLEKENHV---NISMESDEQVVDVFNG 124
+ +NQ + AA+VYL + S ++ V +N + + + +++D F G
Sbjct: 66 QRWEFVENQTFRAAEVYLPTCLAGLSTGKLLVGSSNLKNPAAEPKLGIPVNTKIIDNFEG 125
Query: 125 IKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQ 184
I L+W L VE++ + + RYF LT K++++ ++ Y + K A+ +
Sbjct: 126 IHLEWTL--HSVETKKY-------LPEKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMS 176
Query: 185 ESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDY 244
+ +KI T YN W A +H TFETLA+E + K ++ DL+ F K KD+
Sbjct: 177 HRENLKIYT--YNQDRSKWESAIF----EHHTTFETLAVEPDLKKTLIDDLDAFSKGKDF 230
Query: 245 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATAN 304
++ VG+AWKRGYLLYGPPGTGKSS++AA+AN++ + +YDL++ +R + +LR +L +T N
Sbjct: 231 FKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKN 290
Query: 305 RSILVVEDIDCTIDL----QDRLPADIAGEGEGPIQQNK------VTLSGFLNFIDGLWS 354
RSIL++EDIDC D Q + + GE +G Q+ K ++LSG LNF+DGLWS
Sbjct: 291 RSILLIEDIDCGADASRRRQSKKKEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDGLWS 350
Query: 355 SCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXX 414
SCG+E+II+FTTNHKEKLDPALLRPGRMDVH+ M CTP FK L A YL
Sbjct: 351 SCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVLFDP 410
Query: 415 XXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKR-KEDEDAKPRKIHE-ESTES 472
TPAEV +QLM + + ++ L GL EFL+ K+ K+ ED+ + E E E+
Sbjct: 411 IEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENKKLKKGEDSSVEEEGEIEDAET 470
Query: 473 Q 473
+
Sbjct: 471 K 471
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 180/439 (41%), Positives = 271/439 (61%)
Query: 33 RTVARDLLPYEIQDY-FYFRLR-KFCNRFSSQLTIVIDEHDGLAKNQIYDAAKVYLGKKT 90
R ++ L IQ F R +F N FS + I +++ N + A + YLG K
Sbjct: 30 RIAIKEFLISTIQQLSFVQRFSDRFINFFSPYVEISFSQYEDYQFNHAFAAIETYLGAKA 89
Query: 91 SPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQA 150
+ + ++ S++ KE+ + + +V D + G + W ++E+ S +
Sbjct: 90 TDKAKHLRASQV-KESKGLVLKRDETKVRDEYEGGTVWW-----EMETDSTGY------- 136
Query: 151 QVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDA---- 206
R F+LTF ++ +D+V SY+ V +E KS+Q +SK +K+ T NN +W +
Sbjct: 137 --RTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFT---NNPSSHWGTSKKSF 191
Query: 207 WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGK 266
W ++ +HPA+F TLAM+ ++K +I+ DL F K+YY+++GKAWKRGYLL+GPPGTGK
Sbjct: 192 WRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGK 251
Query: 267 SSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPAD 326
S++IAAMAN+LN+ +YDLELT +R+NS+LR LL AT+++SI+V+EDIDC++DL + +
Sbjct: 252 STMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKE 311
Query: 327 -----IAGEGEGPIQQNK--VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRP 379
+GE +++K VTLSG LNFIDG+WS+CG ERII+FTTNH EKLDPAL+R
Sbjct: 312 KNLMTSREDGEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRR 371
Query: 380 GRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRND-- 437
GRMD+H+ +SYC+ FK+LA NYL T++ PA+VAE LM+ +
Sbjct: 372 GRMDMHIELSYCSFEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLMKKNTE 431
Query: 438 -DPELVLNGLIEFLKVKRK 455
D + L LI+ L+ K+K
Sbjct: 432 IDADGSLKDLIQALEGKKK 450
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 173/437 (39%), Positives = 264/437 (60%)
Query: 16 KTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHDGLAK 75
K ++ AS+ + +++ + P E++ KF FS+ I E DG+
Sbjct: 2 KEYWTSLASLLGVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEIDGVNT 61
Query: 76 NQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQ 135
N++Y+A ++YL S + R+ +++ + V + +++ +VD FN + + W + Q
Sbjct: 62 NELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQ 121
Query: 136 VESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVN 195
++++F + + + R F L KK K++++ SYL + ++A +++ ++ + T +
Sbjct: 122 RQTQTF--AWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNS 179
Query: 196 YNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRG 255
+ W V HP+TF+TLAM+ +K +IM+DL+ F + + +Y R G+AWKRG
Sbjct: 180 RGGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRG 239
Query: 256 YLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDC 315
YLLYGPPGTGKSS+IAAMANYL +D+YDLELTE++SNS+LR LL+ T+++SI+V+EDIDC
Sbjct: 240 YLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDC 299
Query: 316 TIDLQDRL----------PADIAGEGEGPI--QQNKVTLSGFLNFIDGLWSSCGDERIIV 363
+I+L +R P + G G G N +TLSG LNF DGLWS CG ERI V
Sbjct: 300 SINLTNRNKKQSTGSYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDGLWSCCGSERIFV 359
Query: 364 FTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTT- 422
FTTNH EKLDPALLR GRMD+H+HMSYCT S K+L NYLG +
Sbjct: 360 FTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVV 419
Query: 423 ---QVTPAEVAEQLMRN 436
++TPA+V+E L++N
Sbjct: 420 DRAEITPADVSEALIKN 436
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 790 (283.2 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 169/415 (40%), Positives = 254/415 (61%)
Query: 12 LATAKTILSTAASVAATVMLARTVARDLLPY---EIQDYFYFRLRKFCNRFSSQLTIVID 68
+A + + S AT+M T+ + P +++ + Y R F RF + I
Sbjct: 1 MAMMGQLWTNTGSALATLMFVYTIFKQFFPLFGPQLEPFLY---RLF-GRFYPYIQITFH 56
Query: 69 EHDG--LAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIK 126
E+ G +++ Y + YL K +S +++K + + + +SM+ E++ D F GI+
Sbjct: 57 EYSGEHFKRSEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIR 116
Query: 127 LKWVLVCRQVESRSFN-HSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQE 185
+ W +SF+ + N + RY+ L F ++ ++V+I YL V +E K+++Q+
Sbjct: 117 VWWQSKKEGATRQSFSFYPEAN---EKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQK 173
Query: 186 SKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYY 245
++ K+ + + N W V +HPATF+TLAME+ +K +I DL +F K KDYY
Sbjct: 174 NRERKLYSNTPGQSHGN-NSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYY 232
Query: 246 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANR 305
+++GKAWKRGYLL+GPPGTGKS++IAAMAN+L +DVYDLELT ++ N+ LR LL+ T+ +
Sbjct: 233 KKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAK 292
Query: 306 SILVVEDIDCTIDL--QDRLPADIAGEG--------------EGPIQQNKVTLSGFLNFI 349
SI+V+EDIDC+++L Q + + +G EG +++KVTLSG LNFI
Sbjct: 293 SIIVIEDIDCSLNLTGQRKKKEEEEEDGDDKNTIEKKMMMKNEGENKESKVTLSGLLNFI 352
Query: 350 DGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYL 404
DGLWS+CG ERIIVFTTN +KLDPAL+R GRMD H+ MSYC FK+LA NYL
Sbjct: 353 DGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKVLAKNYL 407
Score = 323 (118.8 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 73/149 (48%), Positives = 91/149 (61%)
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
+ EG +++KVTLSG LNFIDGLWS+CG ERIIVFTTN +KLDPAL+R GRMD H+ MS
Sbjct: 333 KNEGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMS 392
Query: 390 YCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQV--TPAEVAEQLMRNDDPE---LVLN 444
YC FK+LA NYL ++ TPA+V E L+ + E L
Sbjct: 393 YCCFEAFKVLAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLK 452
Query: 445 GLIEFLKVKRKEDEDAKPRKIHEESTESQ 473
LIE LK +E E+AK +K+ EE E Q
Sbjct: 453 RLIEALK---EEKEEAK-KKVEEEEEEKQ 477
Score = 43 (20.2 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 451 KVKRKEDEDAKPRKIHEES 469
KVK E E K +KI EE+
Sbjct: 482 KVKEIEAEKEKKKKIEEEN 500
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 790 (283.2 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 167/408 (40%), Positives = 251/408 (61%)
Query: 18 ILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHDG--LAK 75
+ + S A+++ T+ PY ++++F + + I E+ G +
Sbjct: 7 VWTNTGSALASLVFIYTIFERFFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGERFKR 66
Query: 76 NQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQ 135
+ +YDA + YL K +S +++ + ++ + +SM+ E++ D F G+K+ W Q
Sbjct: 67 SDVYDAIQSYLSKDSSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQ 126
Query: 136 VESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVN 195
ESR+ + ++ R++ L F ++ ++V+ YL V E K+++ +++ K+ +
Sbjct: 127 SESRAISFYPKADES--RFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYS-- 182
Query: 196 YNNLYCNWTD----AWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKA 251
NN NW+ W V +HPATF+TLAME ++K +I DL +F KDYY+++GKA
Sbjct: 183 -NNPSQNWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKA 241
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVE 311
WKRGYLL+GPPGTGKS++IAAMAN L +DVYDLELT ++ N++LR LL+ T+ +SI+V+E
Sbjct: 242 WKRGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIE 301
Query: 312 DIDCTIDL--QDRLPADIA-GEGE-GPIQQ-----------NKVTLSGFLNFIDGLWSSC 356
DIDC++DL Q + D E E PI++ +KVTLSG LNFIDGLWS+C
Sbjct: 302 DIDCSLDLTGQRKQKKDEEEDEDETSPIEKQMKKDQGENKGSKVTLSGLLNFIDGLWSAC 361
Query: 357 GDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYL 404
G ERIIVFTTN +KLDPAL+R GRMD H+ MSYC FK+LA NYL
Sbjct: 362 GGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYL 409
Score = 314 (115.6 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 78/171 (45%), Positives = 101/171 (59%)
Query: 311 EDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKE 370
ED D T ++ ++ D GE +G +KVTLSG LNFIDGLWS+CG ERIIVFTTN +
Sbjct: 321 EDEDETSPIEKQMKKD-QGENKG----SKVTLSGLLNFIDGLWSACGGERIIVFTTNFID 375
Query: 371 KLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQV-----T 425
KLDPAL+R GRMD H+ MSYC FK+LA NYL +V T
Sbjct: 376 KLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMT 435
Query: 426 PAEVAEQLMRNDD---PELVLNGLIEFLKVKRKEDEDAKPRKIHEESTESQ 473
PA+V E L++ + E+ L LIE LK +E E+AK R+I +E + +
Sbjct: 436 PADVGENLLKKSEVETKEICLKRLIEALK---EEKEEAK-RRIEDEEKKKK 482
Score = 42 (19.8 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 447 IEFLKVKRKEDEDAKPRKIHEESTESQ 473
IE + K+KE+E+ K +K E+ + +
Sbjct: 474 IEDEEKKKKEEEEIKRKKREEKKIKKE 500
Score = 40 (19.1 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 451 KVKRKEDEDAKPRKIHEESTE 471
++KRK+ E+ K +K +E E
Sbjct: 486 EIKRKKREEKKIKKEEKEEKE 506
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 176/404 (43%), Positives = 251/404 (62%)
Query: 54 KFCNRFSSQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISME 113
K FS I E +G N + A K YLG K + V+ +K +++ KEN +++ ++
Sbjct: 51 KILEFFSPYAYIRFREIEGYRYNYAFAAVKTYLGAKVNSEVKNLKGNQV-KEN-MSLDLK 108
Query: 114 SDE-QVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYL 172
D+ ++ + + G+K+ W + R V+ + + LTF + DVV GSYL
Sbjct: 109 RDDVKIEEEYEGVKMWWEIF-RCVKGK-------------KICRLTFHRSNWDVVTGSYL 154
Query: 173 PCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDA----WIPVNLDHPATFETLAMEQEQK 228
V +E KS++ K + +L NN NW + W +HPATF+TLAM+ ++K
Sbjct: 155 RYVVEEGKSIKARKKKVMVLM---NNPSLNWKTSMKGLWTCTEFEHPATFDTLAMDIDKK 211
Query: 229 TKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTE 288
+I +DL F K+YY R+GKAWKRGYLLYGPPGTGKS++IAAMAN + +++YDLELT
Sbjct: 212 DEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTS 271
Query: 289 LRSNSDLRTLLVATANRSILVVEDIDCTIDLQ-DRLPADIAGEGEGPIQQNKVTLSGFLN 347
+ +N +L+ LL+AT N+SI+V+EDIDC++DL +R D+ G+ EG + N VTLSG LN
Sbjct: 272 IGNNWELKKLLIATTNKSIIVIEDIDCSLDLTGEREVKDLKGDKEGK-KSNAVTLSGLLN 330
Query: 348 FIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXX 407
FIDG+WS+CG ERI+VFTTNH KLD AL+R GRMD+H+ +SYCT FK+LA NYL
Sbjct: 331 FIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTFGAFKILAKNYLNID 390
Query: 408 XXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFLK 451
T++TPA+VAE +M + + L GLI L+
Sbjct: 391 SHHLFGEIESLLKETKITPADVAEHMMAKE-VDGSLKGLIRALE 433
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 174/423 (41%), Positives = 259/423 (61%)
Query: 55 FCNRFSSQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMES 114
F N FS + I E D + NQ + A YL K + + ++ S++ KE+ + +
Sbjct: 58 FTNLFSPYVEIHFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQV-KESKGLVLKRN 116
Query: 115 DEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPC 174
+ +V D + G + W R V+ N + RY++LTF + + ++ SY+
Sbjct: 117 EAKVRDEYKGANVWWE---RVVD----NDGN-------RYYKLTFHNRARTLITNSYIKY 162
Query: 175 VEKEAKSVQQESKTIKILTVNYNNLYCNWT---DAWIPVNLDHPATFETLAMEQEQKTKI 231
V +E KS+ ++K ++ T NNL W + W + +HPA+F+TLAM+ ++K +I
Sbjct: 163 VVEEGKSIIVKNKQTRLFT---NNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEI 219
Query: 232 MQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRS 291
+ DL F K+YY+++GKAWKRGYLLYGPPGTGKS++I+AMAN LN+++YDLELT +++
Sbjct: 220 VNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKN 279
Query: 292 NSDLRTLLVATANRSILVVEDIDCTIDL-QDRLPADIAGE---GEGPIQQNKVTLSGFLN 347
NS+L+ LL AT+++SI+V+EDIDC+ D +R+ + G+ +N VTLSG LN
Sbjct: 280 NSELKKLLTATSSKSIIVIEDIDCSADFTSNRIKKESNSRERYGKEDKDENSVTLSGLLN 339
Query: 348 FIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYL--- 404
FIDG+WS+CG ERI+VFTTNH EKLDPAL+R GRMD+H+ +SYCT FK+LA NYL
Sbjct: 340 FIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDLD 399
Query: 405 GXXXXXXXXXXXXXXSTTQVTPAEVAEQLM-RND--DPELVLNGLIEFLKVKRKEDEDAK 461
G T+++PA+VAE LM RN D + LN LI L+ + + +
Sbjct: 400 GDDAHPLFSEIKALLEETKISPADVAENLMARNQQIDVDKSLNLLISALEEENQYQRSQQ 459
Query: 462 PRK 464
+K
Sbjct: 460 EKK 462
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 170/470 (36%), Positives = 279/470 (59%)
Query: 27 ATVMLARTVARDLLPYEIQDYFYFRLRKFCNRF----SSQLTIVIDEH--DGLAKNQIYD 80
A++M + + +PY++++Y ++K+ ++ S+ + I E+ +GL+K++ YD
Sbjct: 2 ASIMFLWPMYKQFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYD 61
Query: 81 AAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQVESRS 140
YL ++ +R+K + E + + ++ DE VV VF G+ + W V +
Sbjct: 62 EIGNYLSSISTARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVW---SSTVVDKE 118
Query: 141 FNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLY 200
H+S + RY LTF ++D++ +Y+ V +E K + +++ K+ T N ++ Y
Sbjct: 119 DKHNSK----EGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSY 174
Query: 201 CNWTDA-WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLY 259
+W + W V +H A+FETL M+ ++K +I +DL +F K KDYYR+V K WKRGYLL+
Sbjct: 175 SSWWEGLWSNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLF 234
Query: 260 GPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDL 319
GPPGTGKS++I+A+AN+L +DVYDLELT ++ N++L+ L++ T +SI+V+EDIDC+++L
Sbjct: 235 GPPGTGKSTMISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLEL 294
Query: 320 --------------QDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT 365
+++ A+ G + N VTLSG LN IDGLWS+C DE+II+FT
Sbjct: 295 TEHRKKKKEEDEDKEEKKEAENLKRVSGNNESN-VTLSGLLNAIDGLWSACSDEKIIIFT 353
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQVT 425
TN + LDPAL+R GRMD H+ MSYC FK+LA NYL V+
Sbjct: 354 TNFVDNLDPALIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDVS 413
Query: 426 PAEVAEQLMRN---DDPELVLNGLIEFLKVKRKEDEDAKPRKIHEESTES 472
PA+VAE LM DD ++ L++ L+ ++K+ + + RK +++ ++
Sbjct: 414 PADVAENLMPKSDEDDADICFRRLVKSLEEEKKKKIEKEARKNKKKAEDN 463
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 180/461 (39%), Positives = 274/461 (59%)
Query: 20 STAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLTIVIDEHDGLAKNQIY 79
+T AS+ + +T+ + + P E++ F L + + FSS + I E DG+ N++Y
Sbjct: 6 TTMASLLGMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVNTNELY 65
Query: 80 DAAKVYLGKK--------TSPSVQRIKVSKLEKENHVNISMESDEQVVDVFNGIKLKW-- 129
+A ++YL +S + R+ ++++ + V + +++++ DVFNG+ + W
Sbjct: 66 NAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTILWEH 125
Query: 130 VLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTI 189
V+V RQV+S S+ + + R F L K+ K +V+ SYL + +++ +++ ++
Sbjct: 126 VVVQRQVQSFSWRP----MPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEE- 180
Query: 190 KILTVNYNNLYCNW-TDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRV 248
++L N + + + W V HP+TF+TLAM+ E+K +IM+DL F + +Y++
Sbjct: 181 RLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKT 240
Query: 249 GKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL 308
G+AWKRGYLLYGPPGTGKSSLIAAMANYL +D+YDLELTE+++NS+LR LL+ T+++SI+
Sbjct: 241 GRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSII 300
Query: 309 VVEDIDCTIDLQDRL------------PADIAGEG-EGPIQQNKVTLSGFLNFIDGLWSS 355
V+EDIDC+I L R P G G E P + VTLSG LNF DGLWS
Sbjct: 301 VIEDIDCSISLTKRGKNKKKNGSYEYDPGLTNGSGLEEP--GSSVTLSGLLNFTDGLWSC 358
Query: 356 CGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXX 415
CG E+I VFTTNH EKLD AL+R GRMD+HVHM +C K+L NYL
Sbjct: 359 CGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMDSVV 418
Query: 416 XXXXST----TQVTPAEVAEQLMRN-DDPELVLNGLIEFLK 451
++TPA+V+E L+RN D E + ++ LK
Sbjct: 419 LKEMEECVEEAEITPADVSEVLIRNRSDAEKAVREIVSVLK 459
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 129/247 (52%), Positives = 172/247 (69%)
Query: 223 MEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVY 282
ME E K +++DL+ F KD+++ VG+AWKRGYLLYGPPGTGKSSL+AA+AN++N+ +Y
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 283 DLELTELRSNSDLRTLLVATANRSILVVEDIDCT-IDLQDRLP-ADIAGEGEGPIQQNK- 339
DL++ ++ ++ LR +L +T NRSIL++ED+DC+ D R D GE ++ K
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGENQNKKKKK 120
Query: 340 ---VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGF 396
VTLSG LNF+DGLWSSC +ERII+FTTNHKEKLDPALLRPGRMDVH+ M YCTP F
Sbjct: 121 DPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVF 180
Query: 397 KLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKR-- 454
K LAA YL + TPAE+ E+LM + DP++ L GL+EFL+ K+
Sbjct: 181 KKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESKKMT 240
Query: 455 KEDEDAK 461
KE D++
Sbjct: 241 KESVDSE 247
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 142/410 (34%), Positives = 218/410 (53%)
Query: 53 RKFCNRFSS-QLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKL---EKENHV 108
RK + F Q V + +D + +N +Y KVY+ + S++ + L +K N +
Sbjct: 39 RKIIDWFHVYQFYKVPEFNDNVQENHLYQ--KVYMYLNSLSSIENSDFTNLFTGKKSNEI 96
Query: 109 NISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVI 168
+ ++ ++ V D F G ++ W+ N + R F L K K ++
Sbjct: 97 ILRLDRNQVVGDEFLGARVCWI-----------NGEDED---GARNFVLKIRKADKRRIL 142
Query: 169 GSYLPCVEKEAKSVQQESKTIKI-LTVNYN---NLYCNWTDAWIPVNLDHPATFETLAME 224
GSYL + + ++Q + +K+ + V + N W + DHP TF+ +AME
Sbjct: 143 GSYLQHIHTVSDELEQRNTELKLFINVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIAME 202
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
+ K K+ DLE F+K K YY R+G+ WKR YLLYGP GTGKSS +AAMAN+L++DVYD+
Sbjct: 203 TDLKNKVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDI 262
Query: 285 ELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSG 344
+L+++ +SDL+ LL+ T +S++V+ED+D + + V LSG
Sbjct: 263 DLSKVVDDSDLKMLLLQTRGKSVIVIEDLDRHLSTKS----------------TAVNLSG 306
Query: 345 FLNFIDGLWSSC-GDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANY 403
LNF D + SSC DERI+VFT KE++DPA+LRPGR+DVH+H C + FK LA NY
Sbjct: 307 ILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNY 366
Query: 404 LGXXXXXXXXXXXXXXST-TQVTPAEVAEQLMRN-DDPELVLNGLIEFLK 451
LG ++PAE+ E ++ N + P L +I L+
Sbjct: 367 LGVKEHKLFSQVEGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQ 416
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 77/211 (36%), Positives = 133/211 (63%)
Query: 108 VNISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVV 167
+N+ + + D++ G KLKW + V+ + NI Q FEL F +K++D+V
Sbjct: 69 INLDFVEEREFDDIYQGAKLKWRIF---VDKNNIG----NIPKQC--FELRFDEKHRDLV 119
Query: 168 IGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQ 227
SY+P VE +AK ++ + + +++ T Y + D W LDH ++FET+ M+++
Sbjct: 120 FDSYIPFVESKAKEIKSKKRILEMHT------YSHCCDTWETKILDHHSSFETIVMKEDL 173
Query: 228 KTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT 287
K +++ D++ F+ ++D+Y+RVG+ W R YLL+G PG GK+SL+AA+A YLNFDVY++
Sbjct: 174 KRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNIT-Q 232
Query: 288 ELRSNSDLRTLLVATANRSILVVEDIDCTID 318
++++ D R L+ + SIL+VEDID +++
Sbjct: 233 GVKTDFDTRRLIRRVEDSSILLVEDIDTSLE 263
Score = 198 (74.8 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 60/198 (30%), Positives = 101/198 (51%)
Query: 282 YDL-ELTE-LRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNK 339
+D+ +T+ ++++ D R L+ + SIL+VEDID ++ EG +K
Sbjct: 225 FDVYNITQGVKTDFDTRRLIRRVEDSSILLVEDIDTSL--------------EG----SK 266
Query: 340 VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLL 399
V LS L+ + WS+ G R+++FTTN+KE+ D LL RM++ ++M +C FK L
Sbjct: 267 VALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKTL 323
Query: 400 AANYLGXXXXXXXXXXXX-----XXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFLKVKR 454
A+NYLG VTP +V E+LM++ D ++ L L+ + K
Sbjct: 324 ASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRYSSSKE 383
Query: 455 KEDEDAKPRKIHEESTES 472
+ D +I EE+ ++
Sbjct: 384 NDHIDDDLPQIPEETRKN 401
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 80/215 (37%), Positives = 116/215 (53%)
Query: 195 NYNNLYCNWTDAWIPVNLDHPAT---FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKA 251
N +Y W W P HP + ++ +E K I D+ F++ +Y G
Sbjct: 183 NKTTIYTAWATEWKPFG--HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIP 240
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVV 310
++RGYLLYGPPG+GK+S + A+A L++D+ L L E D L LL ++++++
Sbjct: 241 YRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLL 300
Query: 311 EDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKE 370
ED+D ++R GE N VT SG LN +DG+ SS DERII TTNH E
Sbjct: 301 EDVDSAFQGRER-------SGEVGFHAN-VTFSGLLNALDGVTSS--DERIIFMTTNHPE 350
Query: 371 KLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLG 405
KLDPAL+RPGR+DV ++ TP + + + G
Sbjct: 351 KLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 99/318 (31%), Positives = 157/318 (49%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESK 187
KW+ +VE RS ++Q + +TF D I + +E EA+ + + +
Sbjct: 111 KWI----RVE-RSREMQMIDLQTGTPWESVTFTALGTDRKI--FFNILE-EARELALQQE 162
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRR 247
K TV Y + W P P ++ +EQ +I++D+ F+ +Y
Sbjct: 163 EGK--TVMYTAVGSEWRPFGYP-RRRRP--LNSVVLEQGLADRIVRDIREFIDNPKWYTD 217
Query: 248 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRS 306
G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +S
Sbjct: 218 RGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQS 277
Query: 307 ILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFT 365
++++ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+ T
Sbjct: 278 LVLLEDVDAAF-----LSRDLAAENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMT 330
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXX-XXXXXXXXXXXXSTTQ 423
TNH ++LDPAL+RPGR+D+ ++ +C+ ++ Y G +TTQ
Sbjct: 331 TNHVDRLDPALIRPGRVDLKEYVGHCSRWQLTQMFQRFYPGQAPSLAESFADRALQATTQ 390
Query: 424 VTPAEVAEQLMR-NDDPE 440
++PA+V M +DPE
Sbjct: 391 ISPAQVQGYFMLYKNDPE 408
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 99/323 (30%), Positives = 157/323 (48%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESK 187
KW+ +VE RS ++Q + +TF D + + +E EA+ + + +
Sbjct: 111 KWI----RVE-RSREMQMIDLQTGTPWESVTFTALGTDRKV--FFNILE-EARELALQQE 162
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRR 247
K TV Y + W P P T ++ + Q +I++D+ F+ +Y
Sbjct: 163 EGK--TVMYTAMGSEWRPFGYP-RRRRPLT--SVVLGQGLADRIVRDVREFIDNPKWYTD 217
Query: 248 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRS 306
G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +S
Sbjct: 218 RGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQS 277
Query: 307 ILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFT 365
++++ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+ T
Sbjct: 278 LVLLEDVDAAF-----LSRDLAAENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMT 330
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXXXXXXXXXXXXXXS-TTQ 423
TNH ++LDPAL+RPGR+D+ ++ YC+ ++ Y G TTQ
Sbjct: 331 TNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQMFQRFYPGQAPSLAEAFAGRVLQVTTQ 390
Query: 424 VTPAEVAEQLM--RNDDPELVLN 444
++PA+V M +ND + N
Sbjct: 391 ISPAQVQGYFMLYKNDPAGAIHN 413
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESK 187
KW+ +VE RS ++Q + +TF D + + +E EA+ + + +
Sbjct: 111 KWI----RVE-RSREMQMIDLQTGTPWESVTFTALGTDRKV--FFNILE-EARELALQQE 162
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRR 247
K TV Y + W P P ++ +EQ +I++D+ F+ +Y
Sbjct: 163 EGK--TVMYTAVGSEWRPFGYP-RRRRP--LNSVVLEQGVTERIVRDIREFIDNPKWYID 217
Query: 248 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRS 306
G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +S
Sbjct: 218 RGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQS 277
Query: 307 ILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFT 365
++++ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+ T
Sbjct: 278 LVLLEDVDAAF-----LSRDLAAENPIKYQGLGRLTFSGLLNALDGVAST--EARIVFMT 330
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXXXXXXXXXXXXXX-STTQ 423
TNH ++LDPAL+RPGR+D+ ++ +C+ ++ Y G +TTQ
Sbjct: 331 TNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFADRVLQATTQ 390
Query: 424 VTPAEVAEQLM--RNDDPELVLN 444
++PA+V M +ND + N
Sbjct: 391 ISPAQVQGYFMLYKNDPAGAIQN 413
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 101/348 (29%), Positives = 169/348 (48%)
Query: 97 IKVSKLEKEN-HVNISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYF 155
++ S L+ E+ ++ E + F + KW+ +VE RS ++Q +
Sbjct: 79 VETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWI----RVE-RSREMQMIDLQTGTPWE 133
Query: 156 ELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHP 215
+TF D + + +E EA+ + + + K TV Y + W P P
Sbjct: 134 SVTFTALGTDRKV--FFNILE-EARELALQQEEGK--TVMYTAVGSEWRPFGYP-RRRRP 187
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
++ ++Q +I++D++ F+ +Y G ++RGYLLYGPPG GKSS I A+A
Sbjct: 188 --LNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAG 245
Query: 276 YLNFDVYDLELTELRSNSD-LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGP 334
L + L LT+ + D L LL +S++++ED+D L D+A E
Sbjct: 246 ELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENPVK 300
Query: 335 IQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTP 393
Q ++T SG LN +DG+ S+ + RI+ TTNH ++LDPAL+RPGR+D+ ++ YC+
Sbjct: 301 YQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSH 358
Query: 394 SGF-KLLAANYLGXX-XXXXXXXXXXXXSTTQVTPAEVAEQLM--RND 437
++ Y G +T Q++PA+V M +ND
Sbjct: 359 WQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKND 406
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 101/331 (30%), Positives = 161/331 (48%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKD-VVIGSYLPCVEKEAKSVQQES 186
KW+ V R E + ++Q + +TF D V + L E A ++QQE
Sbjct: 111 KWIRVERNREMQM-----VDLQTGTPWESVTFTALGTDRKVFFNILE--EARALALQQEE 163
Query: 187 KTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYR 246
TV Y + W P P +++ ++Q +I++D+ F+ +Y
Sbjct: 164 GK----TVMYTAVGSEWRTFGYP-RRRRP--LDSVVLQQGLADRIVKDIREFIDNPKWYI 216
Query: 247 RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANR 305
G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +
Sbjct: 217 DRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ 276
Query: 306 SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVF 364
S++++ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+
Sbjct: 277 SLVLLEDVDAAF-----LSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFM 329
Query: 365 TTNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXX-XXXXXXXXXXXXSTT 422
TTNH ++LDPAL+RPGR+D+ ++ YC+ ++ Y G +T+
Sbjct: 330 TTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATS 389
Query: 423 QVTPAEVAEQLM--RNDDPELVLNGLIEFLK 451
Q++PA+V M +ND + N +E L+
Sbjct: 390 QISPAQVQGYFMLYKNDPMGAIHN--VESLR 418
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 86/281 (30%), Positives = 143/281 (50%)
Query: 169 GSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQK 228
G Y +E EA+ + E+ K TV Y + W P P ++ +++
Sbjct: 146 GIYFDILE-EARQLALEATEGK--TVLYTAMGAEWRPFGHP-RRRRPTG--SVVLDRGTS 199
Query: 229 TKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTE 288
+I+ D + F+K +Y + G ++RGYLLYGPPG GKSS I A+A L + V L L+E
Sbjct: 200 QRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSE 259
Query: 289 LRSNSD-LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLN 347
D L LL +SI+++EDID ++ P + +G N++T SG LN
Sbjct: 260 RGLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAF-DG---LNRITFSGLLN 315
Query: 348 FIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXX 407
+DG+ S+ + RI+ TTN+ ++LDPAL+RPGR+D+ ++ YCT + + N+
Sbjct: 316 CLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASS 373
Query: 408 XXXXXXXXXXXXST--TQVTPAEVAEQLMRN--DDPELVLN 444
++ +PA++ M++ P+ V++
Sbjct: 374 DTTKAEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVID 414
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 313 (115.2 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 101/331 (30%), Positives = 163/331 (49%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKD-VVIGSYLPCVEKEAKSVQQES 186
KW+ +VE R+ + ++Q + +TF D V + L E A ++QQE
Sbjct: 111 KWI----RVE-RNRDMQMVDLQTGTPWESVTFTALGTDRKVFFNILE--EARALALQQEE 163
Query: 187 KTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYR 246
TV Y + W P P +++ ++Q +I++D+ F+ +Y
Sbjct: 164 GK----TVMYTAVGSEWRTFGYP-RRRRP--LDSVVLQQGLADRIVKDIREFIDNPKWYI 216
Query: 247 RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANR 305
G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +
Sbjct: 217 DRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ 276
Query: 306 SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVF 364
S++++ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+
Sbjct: 277 SLVLLEDVDAAF-----LSRDLAVENPIKYQGLGRLTFSGLLNALDGVAST--EARIVFM 329
Query: 365 TTNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXX-XXXXXXXXXXXXSTT 422
TTN+ ++LDPAL+RPGR+D+ ++ YC+ ++ Y G +T+
Sbjct: 330 TTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATS 389
Query: 423 QVTPAEVAEQLM--RNDDPELVLNGLIEFLK 451
+++PA+V M +ND V N IE L+
Sbjct: 390 EISPAQVQGYFMLYKNDPMGAVHN--IESLR 418
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 307 (113.1 bits), Expect = 8.2e-27, P = 8.2e-27
Identities = 74/204 (36%), Positives = 117/204 (57%)
Query: 193 TVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAW 252
TV Y + W P P + ++ +E +I+ D++ F+ +Y G +
Sbjct: 166 TVMYTAMGAEWRPFGFP-RRRRPLS--SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPY 222
Query: 253 KRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD--LRTLLVATANRSILVV 310
+RGYLLYGPPG GKSS I A+A L + + + L++ RS SD L LL +SI+++
Sbjct: 223 RRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSD-RSLSDDRLNHLLSVAPQQSIILL 281
Query: 311 EDIDCTIDLQDRLPAD--IAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNH 368
ED+D ++ LP + +A +G G ++T SG LN +DG+ SS + RI+ TTN
Sbjct: 282 EDVDAAFVSRELLPTENPLAYQGMG-----RLTFSGLLNALDGVASS--EARIVFMTTNF 334
Query: 369 KEKLDPALLRPGRMDVHVHMSYCT 392
E+LDPAL+RPGR+D+ ++ +C+
Sbjct: 335 IERLDPALVRPGRVDLKQYVGHCS 358
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 312 (114.9 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 72/191 (37%), Positives = 112/191 (58%)
Query: 204 TDAWIPV-NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPP 262
T W P + T +++ +++ K +I++D++ F+ + +Y G ++RGYLLYGPP
Sbjct: 234 TATWTPFGDPRRKRTLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPP 293
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVVEDIDCTIDLQD 321
GTGKSS I A+A L++D+ L L+E D L LL R+++++ED+D +
Sbjct: 294 GTGKSSFIQAVAGELDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLLEDVDAAFSNR- 352
Query: 322 RLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGR 381
R D E + VT SG LN +DG+ S+ +ERI+ TTNH E+LD AL+RPGR
Sbjct: 353 RTQTD-----EDGYRGANVTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGR 405
Query: 382 MDVHVHMSYCT 392
+D+ V + T
Sbjct: 406 VDMTVRIGELT 416
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 303 (111.7 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 75/219 (34%), Positives = 121/219 (55%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLE 236
+E QQE +TI Y + W P P + ++ +E+ ++++D++
Sbjct: 155 RELALQQQEGRTIM-----YTAMGTEWRQFGFP-RRRRPLS--SVVLEKGVSERLVEDVK 206
Query: 237 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-- 294
F+ +Y G ++RGYLLYGPPG GKSS I A+A L + L L++ RS SD
Sbjct: 207 EFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSD-RSLSDDR 265
Query: 295 LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ-QNKVTLSGFLNFIDGLW 353
L LL +SI+++ED+D + D+A E Q ++T SG LN +DG+
Sbjct: 266 LNYLLSVAPQQSIILLEDVDAAF-----VSRDLAAENPAMYQGMGRLTFSGLLNALDGVA 320
Query: 354 SSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
S+ + RI+ TTN+ ++LDPAL+RPGR+D+ ++ +C+
Sbjct: 321 ST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCS 357
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 302 (111.4 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 77/220 (35%), Positives = 122/220 (55%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLE 236
+E QQE +TI Y + W P P + ++ +E+ ++++D++
Sbjct: 155 RELALQQQEGRTIM-----YTAMGTEWRQFGFP-RRRRPLS--SVVLEKGVSERLVEDVK 206
Query: 237 RFVKRKDYYRRVGKA-WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD- 294
F+ +Y GKA +RGYLLYGPPG GKSS I A+A L + L L++ RS SD
Sbjct: 207 EFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSD-RSLSDD 265
Query: 295 -LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ-QNKVTLSGFLNFIDGL 352
L LL +SI+++ED+D + D+A E Q ++T SG LN +DG+
Sbjct: 266 RLNYLLSVAPQQSIILLEDVDAAF-----VSRDLAAENPAMYQGMGRLTFSGLLNALDGV 320
Query: 353 WSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
S+ + RI+ TTN+ ++LDPAL+RPGR+D+ ++ +C+
Sbjct: 321 AST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCS 358
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 91/330 (27%), Positives = 153/330 (46%)
Query: 128 KWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPKKYKDVVIGSYLPCVEKEAKSVQQESK 187
+W+ V RQ E + + +T DV + +E+ AK ++
Sbjct: 130 RWIKVERQREKQVIQRDGIRTPFET----VTLTTLGSDVKF--FKRMLEQSAKEAIDNAE 183
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRR 247
T ++ Y + W +P E++ ++ ++++D + F+ +Y
Sbjct: 184 TGLVI---YQAVGPQWIRFGVPRK---KRDIESVILDGRICEELVEDFQEFISSATWYAD 237
Query: 248 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRS 306
G ++RGYL YGPPGTGKSS I+A+A++ + V L L+E + D L LL S
Sbjct: 238 RGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDDRLNHLLNTAPPNS 297
Query: 307 ILVVEDIDCT-IDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT 365
++++EDID + +D + A +G ++VT SG LN +DG+ +C +ER+ T
Sbjct: 298 VVILEDIDAAFVSREDPMSNHPAYQG-----LSRVTFSGLLNALDGV--ACAEERLTFMT 350
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGF-KLLAANYLGXXXXXXXXXXXXXXST--T 422
TN+ E+LDPAL+RPGR+D + T K+ + Y S T
Sbjct: 351 TNYVERLDPALIRPGRVDRKQYFGNATDGMLSKMFSRFYRQPSDSVLADEFVKRVSEHKT 410
Query: 423 QVTPAEVAEQ-LMRNDDPELVLNGLIEFLK 451
+++PA + LM DP L+ + K
Sbjct: 411 ELSPAMIQGHFLMYKQDPRAALDNIKNMFK 440
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 303 (111.7 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 78/217 (35%), Positives = 122/217 (56%)
Query: 178 EAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATF-ETLAMEQEQKTKIMQDLE 236
EAKS+ +++ K TV ++ +W W P ++ +++ I+ D++
Sbjct: 177 EAKSLALKAREGK--TV----IFTSWGPEWRPFGQPRSKRLLGSVILDEGIAENIVNDVK 230
Query: 237 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-L 295
F+ ++Y + G ++RGYLLYGPPG+GK+S I A+A L++++ L L+E D L
Sbjct: 231 DFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRL 290
Query: 296 RTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSS 355
L+ NRSIL++ED+D + +++ +G N VT SG LN +DG+ S+
Sbjct: 291 NHLMNHIPNRSILLLEDVDAAFNKREQT------NDQG--FNNGVTFSGLLNALDGVASA 342
Query: 356 CGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
+E I TTNH EKLDPALLRPGR+D V + T
Sbjct: 343 --EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNAT 377
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 303 (111.7 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 80/233 (34%), Positives = 126/233 (54%)
Query: 175 VEKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQD 234
V EA ++ + ++ K T YN +W +P P ++ E+ K I++D
Sbjct: 199 VFSEAHALAKSAQAGK--TPVYNIQGMSWAQLGLP-RRKRPLA--SVVFEKGLKEAIVED 253
Query: 235 LERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD 294
++ F+ R +Y G ++R YLL+GPPG+GKSS I A+A L++++ + L E D
Sbjct: 254 VQDFLSRHQWYADRGIPYRRTYLLHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDD 313
Query: 295 -LRTLLVATANRSILVVEDIDCTI-DLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGL 352
L +L+ RSIL++ED+D + Q+ P +G VT SG LN +DG+
Sbjct: 314 KLANMLMRLPPRSILLLEDVDVAFGNRQEMSPDGYSGA--------TVTYSGLLNVLDGM 365
Query: 353 WSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLG 405
+ G++RI TTN+ E+LDPAL+RPGR+DV V + TP L + + G
Sbjct: 366 --AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEATPEQAAELWSRFYG 416
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 187 (70.9 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 215 PATFETLAMEQEQKTKIMQDLERFV--KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
P T+ +++ QK + D++ ++ + + +Y G ++RGYLL+GPPGTGK+SL A
Sbjct: 270 PRALSTVVLDKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFA 329
Query: 273 MANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEG 331
A L ++Y L L+ + D L L R I+++ED+DC Q R P + +
Sbjct: 330 AAGLLGLELYLLNLSSKSLDEDELMALFTDLPTRCIVLLEDVDCAGMSQKRTPGSSSNDD 389
Query: 332 EG 333
G
Sbjct: 390 NG 391
Score = 171 (65.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 318 DLQDRLPADIAGE---GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDP 374
+LQ++ + +G G G ++ V+LSG LN IDG+ ++C + RI+V TTNH EKLDP
Sbjct: 397 ELQEQGEGNSSGTTTGGTGVFEKQGVSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDP 454
Query: 375 ALLRPGRMDVHVHMSYCTPSGFK-LLAANY 403
AL+RPGR+D+ + + T S K L +A Y
Sbjct: 455 ALVRPGRIDLSIAFGHSTTSDIKELFSAIY 484
Score = 43 (20.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 19 LSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCN 57
++ A +TV+L + +D +I+DY + R R++ N
Sbjct: 266 MARAPRALSTVVLDKA-QKDAFIDDIKDYLHPRTRRWYN 303
Score = 41 (19.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLR 296
LIAA A Y+ +Y+L S +++R
Sbjct: 64 LIAATARYIYSQLYNLFQEHCISTAEIR 91
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 292 (107.8 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 80/217 (36%), Positives = 116/217 (53%)
Query: 178 EAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLER 237
EAK + KT + TV Y + W P ++ ++ K I+ D+
Sbjct: 190 EAKDIAL--KTTEGKTVIYTSFGPEWRKFGQP---KAKRMLPSVILDSGIKEGILDDVYD 244
Query: 238 FVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LR 296
F+K +Y G ++RGYLLYGPPG+GK+S I A+A L++++ L L+E D L
Sbjct: 245 FMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLN 304
Query: 297 TLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSC 356
L+ RSIL++EDID + + + GE +G + VT SG LN +DG+ SS
Sbjct: 305 HLMNNMPERSILLLEDIDAAFNKRSQ-----TGE-QG--FHSSVTFSGLLNALDGVTSS- 355
Query: 357 GDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTP 393
+E I TTNH EKLD A++RPGR+D V + TP
Sbjct: 356 -EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATP 391
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 204 (76.9 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLE 236
+EAK + E + K T+ Y ++ +W P P + ++ +++ + I+QD++
Sbjct: 170 EEAKEMALEKEEGK--TLIYTSMGTDWRRFGHP-RRKRPIS--SVILDKGKSELIIQDVK 224
Query: 237 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT-ELRSNSDL 295
+F+ D+Y G ++RGYLLYGPPGTGKSS I A+A L + L L + S++ L
Sbjct: 225 KFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSL 284
Query: 296 RTLLVATANRSILVVEDIDCTI 317
LL RSI+++EDID I
Sbjct: 285 NQLLATAPQRSIILLEDIDSAI 306
Score = 133 (51.9 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 340 VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
+T SG LN +DG+ +S G RI+ TTNH EKLD L+RPGR+D+ + + C+
Sbjct: 348 LTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCS 398
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 282 (104.3 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 77/246 (31%), Positives = 126/246 (51%)
Query: 155 FELTFPKKYKDVVIGSYLPCVEKEAKSVQQESKTIKI-LTVNYNNLYCNWTDA-WIPVNL 212
F++ ++ + I +Y + + QE+ T+ + + +Y N + W
Sbjct: 121 FDMGAGAPFESISISTYKSNAQL-INQLLQEAMTLSLNRDIGKTVIYINGGNGNW--ERF 177
Query: 213 DHPATFETLA---MEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 269
+P + +L+ + + K+K+++D++ F+ + +YR G ++RGYLLYG PG GKSSL
Sbjct: 178 GNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSL 237
Query: 270 IAAMANYLNFDVYDLELTELR-SNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIA 328
I A+A LN D+ + L+ + + LL +SIL++EDID R D
Sbjct: 238 INAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFK-SHRDNVDSN 296
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
N +T SG LN +DG+ S G RI+ TTN E LD AL+R GR+D+ + +
Sbjct: 297 NNNSN--NNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKV 352
Query: 389 SYCTPS 394
S T S
Sbjct: 353 SNATKS 358
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 282 (104.3 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 65/193 (33%), Positives = 107/193 (55%)
Query: 207 WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGK 266
W + + +++ +++ K++ DL F+ K +Y G ++RGYLLYGPPG+GK
Sbjct: 236 WECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGK 295
Query: 267 SSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPAD 326
+S I +MA + + +++ + ++ +++ +ILV+EDID + A
Sbjct: 296 TSFILSMAGNFGKSISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDIDAVFVKRKNNSA- 354
Query: 327 IAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
AG + +T SG LN IDGL SS D RI++ TTNH E+L PAL+RPGR+D+ V
Sbjct: 355 -AGN-------DVLTFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLKV 404
Query: 387 HMSYCTPSGFKLL 399
Y + +L+
Sbjct: 405 KFDYASNHQIELM 417
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 268 (99.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 70/226 (30%), Positives = 124/226 (54%)
Query: 188 TIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVK--RKDYY 245
T++ +YN + W D+ I L +T+ +++ K ++ D+ ++ +D+Y
Sbjct: 229 TVRTCKKSYNGAH--W-DSTI---LRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFY 282
Query: 246 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANR 305
+ G ++RGYLL+GPPGTGK+SL A+A+ ++Y L + L ++ +L ++ R
Sbjct: 283 HQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELPPR 342
Query: 306 SILVVEDIDCT-IDLQDRLPADIAG------EGEGPIQQN-----KVTLSGFLNFIDGLW 353
I+++EDID I ++ L A + G + + ++N + TLSG LN +DG+
Sbjct: 343 CIILLEDIDAVGIPRRNELAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDGVA 402
Query: 354 SSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLL 399
S G RI+ T+N +KLDPAL+RPGR+D + + +L+
Sbjct: 403 SQEG--RIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQESARLM 446
Score = 53 (23.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 424 VTPAEVAEQLMRN-DDPELVLNGLIEFLKVKRKEDEDAKPRKIHEESTESQ 473
VTPA + L+ + DP +G+ +F+K + + E+A+ + + T+++
Sbjct: 515 VTPALIQGFLLSHRSDPLAARDGIQDFIKDEMLKLEEAREKALRARETKAR 565
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 251 (93.4 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 51/83 (61%), Positives = 60/83 (72%)
Query: 326 DIAGEGEGPIQQNK----VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGR 381
D G GE ++ K V+LSG L F+DGLWS+ +ERII+FTTNHKEKLDPA LRPG+
Sbjct: 9 DEGGNGEKQNKKKKNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGK 68
Query: 382 MDVHVHMSYCTPSGFKLLAANYL 404
MDVH+ M YCTP FK L A YL
Sbjct: 69 MDVHILMDYCTPVVFKKLDALYL 91
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 242 (90.2 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 59/203 (29%), Positives = 109/203 (53%)
Query: 44 IQDYFYFRLRKFCNRFSSQLTIVIDEH--DGLAKNQIYDAAKVYLGKKTSPSVQRIKVSK 101
I+ Y Y K S+ + I +E+ +GL K++ +D YL K++ R+K ++
Sbjct: 30 IEKYIY----KLMGWVSNSVHIKFNEYSGEGLEKSEAFDTIHNYLSTKSTALGNRLKANE 85
Query: 102 LEKENHVNISMESDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVRYFELTFPK 161
+K + +S++ E V DVF G+K+KW R+ +++S + A+ RY L+F
Sbjct: 86 SKKSKSLVLSLDDHETVEDVFQGVKVKWSSSVRENQNQSSTNRDKGF-AERRYLTLSFHS 144
Query: 162 KYKDVVIGSYLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWT--DAWIPVNLDHPATFE 219
++++++ +YL V +E K + + + K+ T N ++ + +W W V+ DHPAT E
Sbjct: 145 RHREMITTTYLDHVLREGKEIGLKKRERKLYTNNSSHEWISWRLGTNWSNVSFDHPATLE 204
Query: 220 TLAMEQEQKTKIMQDLERFVKRK 242
T AM+ E K K ++ + +RK
Sbjct: 205 TFAMDPE-KNKAEKEAWKKRRRK 226
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 194 (73.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 49/134 (36%), Positives = 73/134 (54%)
Query: 206 AWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKD--YYRRVGKAWKRGYLLYGPPG 263
AW V T+ ++QEQKT ++ D+ +++ K +Y G +RGYL +GPPG
Sbjct: 257 AWREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPG 316
Query: 264 TGKSSLIAAMANYLNFDVYDLELTELR-SNSDLRTLLVATANRSILVVEDIDCTIDLQDR 322
TGK+SL A+A ++Y + L E + S+ DL TL R I+++EDID T + R
Sbjct: 317 TGKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDID-TAGMS-R 374
Query: 323 LPADIAGEG--EGP 334
+I E EGP
Sbjct: 375 AEGEIRTETKTEGP 388
Score = 115 (45.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G G Q+ +++SG LN IDG+ + G RI + TTN E LD AL+R GR+D+ V
Sbjct: 403 GRGHGDDQKG-ISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQV 457
Score = 49 (22.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 7/40 (17%), Positives = 22/40 (55%)
Query: 114 SDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVR 153
SDE + +FNG+ + +++ +++ + + I+ + +
Sbjct: 345 SDEDLSTLFNGLPRRCIVLLEDIDTAGMSRAEGEIRTETK 384
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 178 (67.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 206 AWIPVNLDHPAT-FETLAMEQEQKTKIMQDLERFVKRKD--YYRRVGKAWKRGYLLYGPP 262
+W V + P T+ ++Q+QKT ++ D+ +++ + +Y G +RGYL +GPP
Sbjct: 270 SWTSV-ANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPP 328
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTELR-SNSDLRTLLVATANRSILVVEDID 314
GTGK+SL A+A D+Y + L E + S DL L R ++++EDID
Sbjct: 329 GTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDID 381
Score = 132 (51.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 33/75 (44%), Positives = 43/75 (57%)
Query: 318 DLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALL 377
DL L +GE Q ++LSG LN IDG+ S G R+++ TTN E LD AL+
Sbjct: 424 DLARALKGGRGSDGE----QKGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALI 477
Query: 378 RPGRMDVHVHMSYCT 392
RPGR+D+ V S T
Sbjct: 478 RPGRVDLQVAFSNAT 492
Score = 39 (18.8 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 114 SDEQVVDVFNGIKLKWVLVCRQVESRSFNHSSTNIQAQVR 153
S+E + ++FN + + V++ +++ + I VR
Sbjct: 358 SEEDLSNLFNCLPRRCVVLLEDIDTAGLTRTEEKIGHSVR 397
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 250 (93.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/214 (31%), Positives = 111/214 (51%)
Query: 199 LYCNWTDAWIPV-NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYL 257
+Y ++ W P N + ++ + + I+ D++ F+ +Y G ++R YL
Sbjct: 196 VYKSFGPEWRPFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYL 255
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATAN-RSILVVEDIDCT 316
L+GPPG GKSSLI A+A Y +F++ + + ++ D L+AT ++IL++EDID
Sbjct: 256 LHGPPGCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFI 315
Query: 317 I-----------DLQDRLPADI-AG-EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIV 363
D + I G I+ V+ SG LN +DG+ ++ +ERII
Sbjct: 316 FINDPIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIF 373
Query: 364 FTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFK 397
TTN+ EKL P L+RPGR+D+ + + Y +K
Sbjct: 374 MTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYK 407
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 250 (93.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/214 (31%), Positives = 111/214 (51%)
Query: 199 LYCNWTDAWIPV-NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYL 257
+Y ++ W P N + ++ + + I+ D++ F+ +Y G ++R YL
Sbjct: 196 VYKSFGPEWRPFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYL 255
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATAN-RSILVVEDIDCT 316
L+GPPG GKSSLI A+A Y +F++ + + ++ D L+AT ++IL++EDID
Sbjct: 256 LHGPPGCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFI 315
Query: 317 I-----------DLQDRLPADI-AG-EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIV 363
D + I G I+ V+ SG LN +DG+ ++ +ERII
Sbjct: 316 FINDPIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIF 373
Query: 364 FTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFK 397
TTN+ EKL P L+RPGR+D+ + + Y +K
Sbjct: 374 MTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYK 407
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 195 (73.7 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVV 310
++RGYLLYGPPG GKSS I A+A L + L LT+ + D L LL +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 311 EDIDCTIDLQDRLPADIAGEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHK 369
ED+D L D+A E Q ++T SG LN +DG+ S+ + RI+ TTNH
Sbjct: 64 EDVDAAF-----LSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHV 116
Query: 370 EK 371
++
Sbjct: 117 DR 118
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 193 (73.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 54/174 (31%), Positives = 89/174 (51%)
Query: 270 IAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVVEDIDCTIDLQDRLPADIA 328
+ ++A L + L LT+ + D L LL +S++++ED+D L D+A
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLA 76
Query: 329 GEGEGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVH 387
E Q ++T SG LN +DG+ S+ + RI+ TTNH ++LDPAL+RPGR+D+ +
Sbjct: 77 VENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEY 134
Query: 388 MSYCTPSGF-KLLAANYLGXX-XXXXXXXXXXXXSTTQVTPAEVAEQLM--RND 437
+ YC+ ++ Y G +T Q++PA+V M +ND
Sbjct: 135 VGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKND 188
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 212 (79.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 55/198 (27%), Positives = 95/198 (47%)
Query: 207 WIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKR--KDYYRRVGKAWKRGYLLYGPPGT 264
W + T+ ++ +K ++ D+ +++ + +Y G ++RGYL GPPGT
Sbjct: 204 WNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGT 263
Query: 265 GKSSLIAAMANYLNFDVYDLELTELR-SNSDLRTLLVATANRSILVVEDIDC---TIDLQ 320
GK+SL +A+A D+Y L L + S S L + ++++EDID T+
Sbjct: 264 GKTSLSSALAGVFGLDIYVLSLLDPNISESHFLRLFSEVPTQCVVLLEDIDAAGMTLKRA 323
Query: 321 DRLP--ADIAGEGE---------GPIQQNKVTLSGFLNFIDGLWSSCGDE-RIIVFTTNH 368
+ P AD + P+ + T ++ + E RI++ TTN
Sbjct: 324 NEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEGRILIMTTNA 383
Query: 369 KEKLDPALLRPGRMDVHV 386
+ LDPAL+RPGR+D+H+
Sbjct: 384 PQDLDPALIRPGRVDMHI 401
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 110 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 169
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 170 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 227
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 228 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 275
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/176 (32%), Positives = 95/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E +K + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 129 STYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 188
Query: 276 YLN---FDVYDLELTE--LRSNSDL-RTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + V EL + + S + R L V SI+ +++ID +I R+ D
Sbjct: 189 HTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRI--DS 244
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
AG G+ +Q+ + L LN +DG + + I+ TN + LDPALLRPGR+D
Sbjct: 245 AGSGDSEVQRTMLEL---LNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGRID 295
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 181 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 298
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 299 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 182 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 299
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 300 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 183 (69.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ + + Q ++ + +E + +YY +G +G +LYG PGTGK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 277 LN---FDVYDLELTELRSNSDLRTL--LVATANRSILVVEDIDCTIDLQDRLPADIAGEG 331
+ +L + +S R + + A + ID ID D + G
Sbjct: 241 TSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFID-EIDAVGTKRFDTSSRG 299
Query: 332 EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
E +Q+ TL LN +DG + S GD +II+ TN + LDPAL+RPGR+D + +
Sbjct: 300 EQEVQR---TLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGRIDRKIEL 351
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 187 (70.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 64/176 (36%), Positives = 89/176 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A E K +IM+ + +F+K +Y R+G RG +L GPPGTGK+ L A A
Sbjct: 295 FADVAGVDEAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANRS---ILVVEDIDCTIDLQDRLPADIA 328
N V E E+ S +R L ATA ++ I+ +++ID + R
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLF-ATARKNAPCIIFIDEIDAIGKARGR------ 406
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT-TNHKEKLDPALLRPGRMD 383
G G + + TL+ L +DG SS E I+VF TN + LDPALLRPGR D
Sbjct: 407 GGQFGSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFD 459
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 183 (69.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 61/175 (34%), Positives = 91/175 (52%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 182 (69.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 62/175 (35%), Positives = 94/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID + + R ++
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-VGTK-RYDSNSG 299
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 300 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 180 (68.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 58/176 (32%), Positives = 94/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E VK + + +G A +G +LYGPPGTGK+ L A+A+
Sbjct: 141 STYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 200
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL + +R L V SI+ +++ID +I R+
Sbjct: 201 HTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRVEGSS 258
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG SS D +II+ TN + LDPALLRPGR+D
Sbjct: 259 GGDSE--VQRTMLEL---LNQLDGFESS-KDIKIIM-ATNRLDILDPALLRPGRID 307
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 62/175 (35%), Positives = 93/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYG PGTGK+ L A+AN
Sbjct: 183 TYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 62/175 (35%), Positives = 93/175 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYG PGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L R L VA + SI+ +++ID I + R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA-IGTK-RYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ + L LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQRTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 57/176 (32%), Positives = 95/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E VK + + +G A +G +LYGPPGTGK+ L A+A+
Sbjct: 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 204
Query: 276 YLN---FDVYDLELTE--LRSNSDL-RTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + V EL + + S + R L V SI+ +++ID +I R+
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-STRVEG-- 260
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+G G+ +Q+ + L LN +DG +S + I+ TN + LDPALLRPGR+D
Sbjct: 261 SGGGDSEVQRTMLEL---LNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRID 311
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 175 (66.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 66/192 (34%), Positives = 101/192 (52%)
Query: 204 TDAWIPVNLDHPATFETLA----MEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLY 259
TD + V A ET A ++Q Q +I + +E + +YY +G +G +LY
Sbjct: 170 TDPMVSVMKLEKAPQETYADVGGLDQ-QIQEIKEAVELPLTHPEYYEEMGIRPPKGVILY 228
Query: 260 GPPGTGKSSLIAAMANYLNFDVYDLELTELRSN--SD----LRTLL-VATANR-SILVVE 311
G PGTGK+ L A+AN + + +EL D +R L VA N SI+ ++
Sbjct: 229 GCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFID 288
Query: 312 DIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEK 371
+ID + + R ++ GE E IQ+ + L LN +DG + S GD ++++ TN E
Sbjct: 289 EIDA-VGTK-RYDSNSGGERE--IQRTMLEL---LNQLDG-FDSRGDVKVLM-ATNRIES 339
Query: 372 LDPALLRPGRMD 383
LDPAL+RPGR+D
Sbjct: 340 LDPALIRPGRID 351
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 174 (66.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/176 (30%), Positives = 93/176 (52%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + ++Q +I + +E VK + + +G +G LLYGPPGTGK+ L A+A+
Sbjct: 142 STYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAH 201
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +I R +
Sbjct: 202 HTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRSDSS- 258
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G G+ +Q+ + L LN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 259 GGSGDSEVQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 309
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/179 (31%), Positives = 90/179 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K ++M+ + +F++ + Y ++G RG +L GPPGTGK+ L A A
Sbjct: 372 FKDVAGMAEAKQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 278 NFDVYDL---ELTELRSN---SDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAG 329
Y + E E+ S +R L A N SI+ V++ID + + G
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSK------G 484
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + TL+ L +DG +S D +++ TN + LD AL+RPGR D HVH+
Sbjct: 485 NATGANDERETTLNQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDRHVHI 541
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/176 (31%), Positives = 93/176 (52%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 145 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 204
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL + +R L V SI+ +++ID +I R+ +
Sbjct: 205 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRIESGS 262
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 263 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 311
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 176 (67.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 59/176 (33%), Positives = 93/176 (52%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
TF+ +A + K ++ + ++ +++ ++R+G +G LL GPPGTGK+ L A+A
Sbjct: 173 TFDDVAGMENPKMELKEIVD-YLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 276 ----YLNFDVYD-LELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
+L+ +E+ +R L ATA +S + ID +D R AG
Sbjct: 232 ADVTFLSISASQFIEMFVGVGAGRVRDLF-ATAKKSAPSIIFID-ELDAVGRSRG--AGL 287
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L+ +DG S DE I++ TN + LDPALLRPGR D HV
Sbjct: 288 GGGHDEREQ-TLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDRHV 340
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 171 (65.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/176 (30%), Positives = 95/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E +K + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +I R+ +
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SARMESG- 274
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+G G+ +Q+ + L LN +DG +S ++ ++ TN + LD ALLRPGR+D
Sbjct: 275 SGNGDSEVQRTMLEL---LNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 171 (65.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/176 (30%), Positives = 95/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E +K + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +I R+ +
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SARMESG- 274
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+G G+ +Q+ + L LN +DG +S ++ ++ TN + LD ALLRPGR+D
Sbjct: 275 SGNGDSEVQRTMLEL---LNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 171 (65.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK +++ +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 141 STYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 200
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID + RL
Sbjct: 201 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID---SIGSRLEGGS 257
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 258 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 306
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 149 (57.5 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLE 236
+EA+ + + + K TV Y + W P P ++ ++Q +I++D++
Sbjct: 32 EEARELALQQEEGK--TVMYTAVGSEWRPFGYP-RRRRP--LNSVVLQQGLADRIVRDVQ 86
Query: 237 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-L 295
F+ +Y G ++RGYLLYGPPG GKSS I A+A L + L LT+ + D L
Sbjct: 87 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 146
Query: 296 RTLL 299
LL
Sbjct: 147 NHLL 150
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 169 (64.5 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 57/173 (32%), Positives = 86/173 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYD 283
QK ++ + +E + + D YR++G RG LLYGPPGTGK+ L+ A+AN NF V
Sbjct: 142 QKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVG 201
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q+
Sbjct: 202 SEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQRI 257
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM-SY 390
+ L L +DG G ++ TN + LDPALLRPGR+D + SY
Sbjct: 258 LIEL---LTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/179 (30%), Positives = 88/179 (49%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
N + + + EQ ++ + +E + Y+RVG +G LLYGPPGTGK+ L
Sbjct: 129 NSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLA 188
Query: 271 AAMANYLNFDVYDLELTELRSN--SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIA 328
AMA+ +N + + ++ + + ++ N + E C I D + A I
Sbjct: 189 RAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYA---KEHQPCII-FMDEIDA-IG 243
Query: 329 GE--GEGPIQQNKV--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G +G ++ TL LN +DG + G+ +II+ TN + LDPAL+RPGR+D
Sbjct: 244 GRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLD 300
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/179 (30%), Positives = 88/179 (49%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
N + + + EQ ++ + +E + Y+RVG +G LLYGPPGTGK+ L
Sbjct: 129 NSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLA 188
Query: 271 AAMANYLNFDVYDLELTELRSN--SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIA 328
AMA+ +N + + ++ + + ++ N + E C I D + A I
Sbjct: 189 RAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYA---KEHQPCII-FMDEIDA-IG 243
Query: 329 GE--GEGPIQQNKV--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G +G ++ TL LN +DG + G+ +II+ TN + LDPAL+RPGR+D
Sbjct: 244 GRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLD 300
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/172 (34%), Positives = 92/172 (53%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
+ Q +I + +E + + Y +G +G +LYGPPGTGK+ L A+AN + V
Sbjct: 199 ESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRV 258
Query: 282 YDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + L L R + VA + SI+ +++ID + + R A GE E IQ
Sbjct: 259 VGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA-VGTK-RYEATSGGERE--IQ 314
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ + L LN +DG + S GD ++I+ TN + LDPAL+RPGR+D + +
Sbjct: 315 RTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/172 (34%), Positives = 92/172 (53%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
+ Q +I + +E + + Y +G +G +LYGPPGTGK+ L A+AN + V
Sbjct: 199 ESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRV 258
Query: 282 YDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + L L R + VA + SI+ +++ID + + R A GE E IQ
Sbjct: 259 VGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA-VGTK-RYEATSGGERE--IQ 314
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ + L LN +DG + S GD ++I+ TN + LDPAL+RPGR+D + +
Sbjct: 315 RTMLEL---LNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 171 (65.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 59/181 (32%), Positives = 92/181 (50%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K +IM+ + F+K Y+++G +G +L GPPGTGK+ L A A
Sbjct: 352 TFKDVAGMDEAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGE 410
Query: 277 LNFDVYDL---ELTELRSN---SDLRTLLV-ATANRSILV-VEDIDCTIDLQDRLPADIA 328
+ Y + + E+ S +R L A AN +V +++ID + R
Sbjct: 411 AGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSR------ 464
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT-TNHKEKLDPALLRPGRMDVHVH 387
G ++N TL+ L +DG S+ G ++VF TN + LDPALLRPGR D ++
Sbjct: 465 GGFHNDEREN--TLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIY 519
Query: 388 M 388
+
Sbjct: 520 V 520
Score = 49 (22.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 33/130 (25%), Positives = 55/130 (42%)
Query: 6 TSAENKLATAKTILSTAASVAATVM--LARTVARDLL--------PYEIQDYFYFRLRKF 55
+S+ N L T K + STA++ A T L + R L+ P I D R
Sbjct: 2 SSSSNILKTTKILFSTASNNATTKKSRLISYLNRSLINNNENNKIPQSIIDNNNNSNRNI 61
Query: 56 --CNRFSSQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISME 113
CN +SS I E++ L ++I K + P + + ++ + EN +++
Sbjct: 62 LKCNIYSSFNNNKI-ENNKLFISEIQSNFKRFSSSSPPPKSPKDEDNEKKFENEKETTVK 120
Query: 114 SDEQVVDVFN 123
D+ DV N
Sbjct: 121 QDKNKNDVEN 130
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/176 (30%), Positives = 94/176 (53%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E +K + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 142 STYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 201
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L + SI+ +++ID +I R +
Sbjct: 202 HTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID-SIG-SSRGESG- 258
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+G G+ +Q+ + L LN +DG S+ + ++ TN + LDPALLRPGR+D
Sbjct: 259 SGGGDSEVQRTMLEL---LNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRID 309
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 57/198 (28%), Positives = 98/198 (49%)
Query: 215 PATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P FE +A E K ++++ ++ F+K ++ Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 275 NYLNFD-VYDL--ELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPAD 326
N +Y E E+ + + L A A SI+ +++ID R
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGG--KRSSGS 261
Query: 327 IAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+ G G+ +++ TL+ L +DG ++ +++ TN + LD ALLRPGR D V
Sbjct: 262 VNGAGQ---REHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 387 HMSYCTPSGFKLLAANYL 404
++ +G K + Y+
Sbjct: 317 YVPLPDINGRKKILEIYI 334
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 57/198 (28%), Positives = 98/198 (49%)
Query: 215 PATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P FE +A E K ++++ ++ F+K ++ Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 275 NYLNFD-VYDL--ELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPAD 326
N +Y E E+ + + L A A SI+ +++ID R
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGG--KRSSGS 261
Query: 327 IAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+ G G+ +++ TL+ L +DG ++ +++ TN + LD ALLRPGR D V
Sbjct: 262 VNGAGQ---REHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 387 HMSYCTPSGFKLLAANYL 404
++ +G K + Y+
Sbjct: 317 YVPLPDINGRKKILEIYI 334
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q ++ + +E VK + + +G + +G LLYGPPGTGK+ L A+A+
Sbjct: 176 STYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +I Q I
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQR-----I 289
Query: 328 AGE-GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE G+ +Q+ T+ LN +DG S+ + ++ TN + LD ALLRPGR+D
Sbjct: 290 EGEHGDSEVQR---TMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRID 341
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q ++ + +E VK + + +G + +G LLYGPPGTGK+ L A+A+
Sbjct: 176 STYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +I Q I
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQR-----I 289
Query: 328 AGE-GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE G+ +Q+ T+ LN +DG S+ + ++ TN + LD ALLRPGR+D
Sbjct: 290 EGEHGDSEVQR---TMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRID 341
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 61/167 (36%), Positives = 90/167 (53%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
+ Q +I + +E + + Y +G +G +LYG PGTGK+ L A+AN + V
Sbjct: 194 EAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV 253
Query: 282 YDLELTE--LRSNSDL-RTLL-VAT-ANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + L L R L VA + SI+ +++ID + + R A+ GE E IQ
Sbjct: 254 VGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDA-VGTK-RYDANSGGERE--IQ 309
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ + L LN +DG + S GD ++I+ TN E LDPALLRPGR+D
Sbjct: 310 RTMLEL---LNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/183 (33%), Positives = 90/183 (49%)
Query: 211 NLDHPA-TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 269
N+D P TF +A E K ++ + +E F+K ++ ++ +G +G LL GPPGTGK+ L
Sbjct: 150 NMDKPTITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKGILLIGPPGTGKTLL 208
Query: 270 IAAMANYLN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRL 323
A+A F + E E+ S +R L A ++ + ID ID R
Sbjct: 209 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF-DQAKKNAPCIIFID-EIDAVGRQ 266
Query: 324 PADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
AG G G ++ + TL+ L +DG I++ TN + LDPALLRPGR D
Sbjct: 267 RG--AGLGGGHDEREQ-TLNQILVEMDGF--DTDTSVIVIAATNRPDILDPALLRPGRFD 321
Query: 384 VHV 386
V
Sbjct: 322 RRV 324
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 263
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 264 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 152 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 211
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 212 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 269
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 270 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 318
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 172 (65.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 59/189 (31%), Positives = 96/189 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A E K +IM+ + F+K + ++++G RG +L GPPGTGK+ L A A
Sbjct: 401 FSDVAGMDEAKVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGES 459
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANRS---ILVVEDIDCTIDLQDRLPADIA 328
F V E E+ S +R L A A ++ I+ +++ID I + R + +
Sbjct: 460 GVPFFSVSGSEFVEMFVGVGPSRVRDLF-ANARKNTPCIIFIDEIDA-IG-KSRSAKNFS 516
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + + TL+ L +DG +S D+ +++ TN + LD AL+RPGR D H+ +
Sbjct: 517 GGND----ERESTLNQILTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFDRHISI 570
Query: 389 SYCTPSGFK 397
T G K
Sbjct: 571 DRPTMDGRK 579
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 154 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 213
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 214 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 271
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 272 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 154 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 213
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID +I RL
Sbjct: 214 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRLEGGS 271
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 272 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 58/184 (31%), Positives = 91/184 (49%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
D +F+ +A E K +IM+ + F+K Y ++G RG +L GPPGTGK+ L A
Sbjct: 282 DIKISFKNVAGCDEAKQEIMEFVH-FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKA 340
Query: 273 MANYLN---FDVYDLELTELRSN---SDLRTLLVATANR--SILVVEDIDCTIDLQDRLP 324
A N V E E+ S +R L + SI+ +++ID I ++R
Sbjct: 341 TAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA-IG-KERGK 398
Query: 325 ADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
G G + + TL+ L +DG +S D+ +++ TN + LD AL+RPGR D
Sbjct: 399 GGALG---GANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDR 453
Query: 385 HVHM 388
H+ +
Sbjct: 454 HIQI 457
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 61/167 (36%), Positives = 89/167 (53%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
+ Q +I + +E + + Y +G +G +LYG PGTGK+ L A+AN + V
Sbjct: 194 EAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV 253
Query: 282 YDLELTE--LRSNSDL-RTLL-VAT-ANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + L L R L VA + SI+ +++ID + + R A GE E IQ
Sbjct: 254 VGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDA-VGTK-RYDAHSGGERE--IQ 309
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ + L LN +DG + S GD ++I+ TN E LDPALLRPGR+D
Sbjct: 310 RTMLEL---LNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 165 (63.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 71/256 (27%), Positives = 121/256 (47%)
Query: 148 IQAQVRYF-ELTFPKKYKDVVI-----GSYLPCVEK--EAKSVQQESKT-IKILTVNYNN 198
+Q Q Y E+ P V++ G Y+ V+K K V S+ ++ + +
Sbjct: 60 LQEQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHK 119
Query: 199 LYCNWTDAWIPVNLDH--P-ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRG 255
+ N D + + L P +T+E + +Q +I + +E VK + + +G +G
Sbjct: 120 ILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKG 179
Query: 256 YLLYGPPGTGKSSLIAAMANYLNFDVYDLELTEL------RSNSDLRTLLVATANR--SI 307
LLYGPPGTGK+ L A+A++ + +EL + +R L V SI
Sbjct: 180 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 239
Query: 308 LVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTN 367
+ +++ID +I RL G G+ +Q+ + L LN +DG ++ + ++ TN
Sbjct: 240 IFMDEID-SIG-SARLET---GTGDSEVQRTMLEL---LNQLDGFEATKNIK--VIMATN 289
Query: 368 HKEKLDPALLRPGRMD 383
+ LD ALLRPGR+D
Sbjct: 290 RIDVLDQALLRPGRID 305
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LL+GPPGTGK+ L A+A+
Sbjct: 156 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAH 215
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL +R L V SI+ +++ID +I R+
Sbjct: 216 HTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRVEGSS 273
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 274 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 322
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 73/229 (31%), Positives = 113/229 (49%)
Query: 170 SYLPCVEKEAK----SVQQESKTIKILTVNYNNLYCNWTDAWIPV-NLDHPAT--FETLA 222
S L V+KE SV KT+ I+ V ++ D + V +D T + +
Sbjct: 131 SILSFVDKELLEPGCSVLLHHKTMSIVGVLQDD-----ADPMVSVMKMDKSPTESYSDIG 185
Query: 223 MEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---F 279
+ Q +I + +E + + Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 186 GLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFL 245
Query: 280 DVYDLELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGP 334
+ EL + L L R + VA N SI+ +++ID I + R ++ GE E
Sbjct: 246 RIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDA-IGTK-RYDSNSGGERE-- 301
Query: 335 IQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
IQ+ + L LN +DG + GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 302 IQRTMLEL---LNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRID 345
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 58/184 (31%), Positives = 91/184 (49%)
Query: 211 NLDH--PA--TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGK 266
N+ H P T+ + +Q ++ + +E + + + RVG +G LLYGPPGTGK
Sbjct: 129 NMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGK 188
Query: 267 SSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRL 323
+ L A+A+ L D ++ S++ + + +A R + D I D +
Sbjct: 189 TLLARAVASQL-----DANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEI 243
Query: 324 PADIAGE--GEGPIQQNKV--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRP 379
A I G EG ++ TL LN +DG + S G ++I+ TN + LDPALLRP
Sbjct: 244 DA-IGGRRFSEGTSADREIQRTLMELLNQMDG-FDSLGQVKMIM-ATNRPDSLDPALLRP 300
Query: 380 GRMD 383
GR+D
Sbjct: 301 GRLD 304
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 52/176 (29%), Positives = 91/176 (51%)
Query: 224 EQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LNF-- 279
++E K K+++ ++ ++ D ++ +G + +G LLYGPPG K+ A+A LNF
Sbjct: 504 QEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLA 563
Query: 280 ----DVYDLELTELRSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAGEGEG 333
++++ + E S +R + A+ SI+ ++ID + D G+
Sbjct: 564 VKGPEIFNKYVGE--SERAIREIFRKARAASPSIIFFDEIDA-------IAGDRDGDSST 614
Query: 334 PIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
N L+ LN IDG+ G +IV TN ++DPALLRPGR+D H++++
Sbjct: 615 TAASN--VLTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHIYVA 666
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 51/187 (27%), Positives = 81/187 (43%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
NL T++ + +Q + +E + + G + RG LL+GPPGTGK+ L+
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 271 AAMANYLNFDVYDLELTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADI 327
+AN + + + + S + L T N R I + +I D + + I
Sbjct: 281 RCVAN----SITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDS-I 335
Query: 328 A----GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDE-RIIVF-TTNHKEKLDPALLRPGR 381
A + G + V + L +DG+ GD RI+V TN +D AL RPGR
Sbjct: 336 APSRTSDDSGETESRVV--AQLLTVMDGM----GDNGRIVVIGATNRPNSIDSALRRPGR 389
Query: 382 MDVHVHM 388
D V +
Sbjct: 390 FDQEVEI 396
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 53/165 (32%), Positives = 85/165 (51%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
QK +I + +E + D Y+++G RG LLYGPPGTGK+ L+ A+AN +
Sbjct: 174 QKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNG 233
Query: 287 TEL------RSNSDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
+E +R + +A N +I+ +++ID R A + E +Q
Sbjct: 234 SEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 287
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++I+ TN + LDPALLRPGR+D
Sbjct: 288 RILLE-LLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLD 329
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 132 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 186
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 187 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 245
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 246 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 293
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 57/184 (30%), Positives = 87/184 (47%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ + EQ ++ + +E +K + ++RVG +G LLYGPPGTGK+ L A+A
Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238
Query: 277 L--NFDVYDLE-LTELRSNSDLRTLLVATANRSILVVEDIDCTI--DLQDRLPADIAGEG 331
+ NF + + R + A E C I D D + EG
Sbjct: 239 IGANFIFSPASGIVDKYIGESARIIREMFAYAK----EHEPCIIFMDEVDAIGGRRFSEG 294
Query: 332 EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYC 391
++ + TL L +DG + + G +II+ TN + LDPALLRPGR+D V +
Sbjct: 295 TSADREIQRTLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLDRKVEIPLP 352
Query: 392 TPSG 395
+G
Sbjct: 353 NEAG 356
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 194
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 253
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 254 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 163 (62.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 146 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 200
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 201 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 259
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 260 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 307
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 154 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 208
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 267
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 268 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 154 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 208
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 267
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 268 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LLYGPPGTGK+ L A+A+ L D
Sbjct: 154 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCN 208
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S+S + + +A R + D I D + A I G EG ++
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 267
Query: 341 --TLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHM 388
TL LN +DG + R+ ++ TN + LDPALLRPGR+D +H+
Sbjct: 268 QRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 162 (62.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 57/165 (34%), Positives = 79/165 (47%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVY 282
EQ ++ + +E +K + + RVG +G LLYGPPGTGK+ L A+A L NF V
Sbjct: 139 EQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVV 198
Query: 283 DLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
+ + R + E C I D + A I G EG ++
Sbjct: 199 SSAIVDKYIGESARIIREMFGYAK----EHEPCVI-FMDEIDA-IGGRRFSEGTSADREI 252
Query: 341 --TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
TL LN +DG + G +II+ TN + LDPALLRPGR+D
Sbjct: 253 QRTLMELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLD 295
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 166 (63.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 61/177 (34%), Positives = 82/177 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K M+ +E F+K+ + + VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLV-ATANRSILVVEDIDCTIDLQDRLPADIAG 329
F + E E+ S +R L A N +V D ID R G
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD---EIDAVGRQRGTGIG 333
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G +Q TL+ L +DG + G I+V TN + LD ALLRPGR D V
Sbjct: 334 GGNDEREQ---TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 385
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 166 (63.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 61/177 (34%), Positives = 82/177 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K M+ +E F+K+ + + VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLV-ATANRSILVVEDIDCTIDLQDRLPADIAG 329
F + E E+ S +R L A N +V D ID R G
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD---EIDAVGRQRGTGIG 340
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G +Q TL+ L +DG + G I+V TN + LD ALLRPGR D V
Sbjct: 341 GGNDEREQ---TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 392
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 166 (63.5 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 213 DH-P-ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
DH P T++ + Q I + +E +KR + ++ G + RG LLYGPPGTGK+ +
Sbjct: 310 DHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIA 369
Query: 271 AAMANYLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDR 322
A+AN + V + E+ S S LR + + R SI+ ++++D ++
Sbjct: 370 KAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREG 429
Query: 323 LPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGR 381
++ + +V S L +DG+ S + +++V TN LD AL RPGR
Sbjct: 430 AQNEV---------EKRVVAS-LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGR 479
Query: 382 MDVHVHM 388
D + +
Sbjct: 480 FDKEIEI 486
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 166 (63.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 74/256 (28%), Positives = 114/256 (44%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+F +A + K ++ Q++ F+K D Y +G +G LL GPPGTGK+ L A+A
Sbjct: 260 SFADVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318
Query: 277 LNFDVYDL---ELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
+ E EL S +R L +++ +V ID ID R AG
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVF-ID-EIDAVGRQRG--AGM 374
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSY 390
G G ++ + T++ L +DG + G I++ TN + LD ALLRPGR D V +
Sbjct: 375 GGGNDEREQ-TINQLLTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGRFDRQVTVDR 431
Query: 391 CTPSG-FKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEF 449
+G K+L + G T T A++ + LM N+ +L E
Sbjct: 432 PDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADL-QNLM-NE--AAILAARREL 487
Query: 450 LKVKRKEDEDAKPRKI 465
++ + E DA R I
Sbjct: 488 KEISKDEISDALERII 503
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 162 (62.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 54/165 (32%), Positives = 85/165 (51%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LL+GPPGTGK+ L A+A+ L D
Sbjct: 157 EQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL-----DCN 211
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S++ + + +A R + D I D + A I G EG ++
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDA-IGGRRFSEGTSADREI 270
Query: 341 --TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
TL LN +DG + S G ++I+ TN + LDPALLRPGR+D
Sbjct: 271 QRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLD 313
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 162 (62.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 54/165 (32%), Positives = 85/165 (51%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ ++ + +E + + ++RVG +G LL+GPPGTGK+ L A+A+ L D
Sbjct: 157 EQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL-----DCN 211
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S++ + + +A R + D I D + A I G EG ++
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDA-IGGRRFSEGTSADREI 270
Query: 341 --TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
TL LN +DG + S G ++I+ TN + LDPALLRPGR+D
Sbjct: 271 QRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLD 313
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 162 (62.1 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 53/165 (32%), Positives = 84/165 (50%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
QK +I + +E + + D Y ++G RG LLYGPPGTGK+ L+ A+AN +
Sbjct: 163 QKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRING 222
Query: 287 TEL------RSNSDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
+E +R + +A N +I+ +++ID R A + E +Q
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 276
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + ++I+ TN + LDPALLRPGR+D
Sbjct: 277 RILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 162 (62.1 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 53/165 (32%), Positives = 84/165 (50%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
QK +I + +E + + D Y ++G RG LLYGPPGTGK+ L+ A+AN +
Sbjct: 163 QKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRING 222
Query: 287 TEL------RSNSDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
+E +R + +A N +I+ +++ID R A + E +Q
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 276
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + ++I+ TN + LDPALLRPGR+D
Sbjct: 277 RILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 162 (62.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 57/174 (32%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
+E + ++Q +I + +E +K + + +VG +G LLYGPPGTGK+ L A+A
Sbjct: 169 YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATET 228
Query: 278 N---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIAG 329
N V EL + + + L + A SI+ +++ID R A G
Sbjct: 229 NATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIA--AKRTDALTGG 286
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E +Q+ TL L +DG + + GD +II TN + LDPA+LRPGR D
Sbjct: 287 DRE--VQR---TLMQLLAEMDG-FDARGDVKIIG-ATNRPDILDPAILRPGRFD 333
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 158 (60.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 56/187 (29%), Positives = 91/187 (48%)
Query: 208 IPVNLDHPATFETLAMEQEQKTKIMQDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGT 264
+ VN D ETL E + + K M+ +E V K+ + +G +G L+YGPPGT
Sbjct: 116 VGVNKDSYLILETLPTEYDSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 175
Query: 265 GKSSLIAAMANYLNFDVYDL---ELTELRSNSDLRTL--LVATANR---SILVVEDIDCT 316
GK+ L A A L +L ++ + + A A SI+ ++++D
Sbjct: 176 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA- 234
Query: 317 IDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPAL 376
I + R ++ AG+ E +Q+ + L LN +DG + + ++ TN + LDPAL
Sbjct: 235 IGTK-RFDSEKAGDRE--VQRTMLEL---LNQLDGFQPNTQVK--VIAATNRVDILDPAL 286
Query: 377 LRPGRMD 383
LR GR+D
Sbjct: 287 LRSGRLD 293
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 74/256 (28%), Positives = 114/256 (44%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A + K ++ Q++ F+K D Y +G +G LL GPPGTGK+ L A+A
Sbjct: 248 TFGDVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 277 LNFDVYDL---ELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
+ E EL S +R L +++ +V ID ID R AG
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVF-ID-EIDAVGRQRG--AGM 362
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSY 390
G G ++ + T++ L +DG + G I++ TN + LD ALLRPGR D V +
Sbjct: 363 GGGNDEREQ-TINQLLTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGRFDRQVTVDR 419
Query: 391 CTPSG-FKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEF 449
+G ++L + G T T A++ + LM N+ +L E
Sbjct: 420 PDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADL-QNLM-NE--AAILAARREL 475
Query: 450 LKVKRKEDEDAKPRKI 465
++ + E DA R I
Sbjct: 476 KEISKDEISDALERII 491
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 164 (62.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 60/176 (34%), Positives = 87/176 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++ + +E F+K Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R L A ++ + ID ID R AG
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLF-EQAKKNAPCIVFID-EIDAVGRQRG--AGL 270
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG S+ G II+ TN + LDPALLRPGR D H+
Sbjct: 271 GGGHDEREQ-TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 164 (62.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 60/176 (34%), Positives = 87/176 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++ + +E F+K Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R L A ++ + ID ID R AG
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLF-EQAKKNAPCIVFID-EIDAVGRQRG--AGL 270
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG S+ G II+ TN + LDPALLRPGR D H+
Sbjct: 271 GGGHDEREQ-TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 165 (63.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 59/176 (33%), Positives = 89/176 (50%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFE +A E K ++ +++ +F+K + ++G +G LL GPPGTGK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R L V + ++ ID ID R AG
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIF-ID-EIDAVGRHRG--AGL 265
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG S+ G I++ TN + LDPALLRPGR D V
Sbjct: 266 GGGHDEREQ-TLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQV 318
Score = 43 (20.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 64 TIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQRIKVSKLEKENHVNISMESDEQVVDVFN 123
T+ + ++ + K Y K + K + ++ K+ LEK+ +N+S + +E+ V F+
Sbjct: 51 TVTVQGNEIIGK---YSDGKEFRSYKPTDAMLSEKL--LEKK--INVSAKPEEEKVSWFS 103
Query: 124 GIKLKW 129
I + W
Sbjct: 104 -IFISW 108
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLNFDV 281
QK +I + +E + + D Y ++G RG LLYGPPGTGK+ L+ A+AN ++ +
Sbjct: 180 QKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNG 239
Query: 282 YDLELTELRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
+ L + R + +A N SI+ ++++D +I + R A + E +Q+
Sbjct: 240 SEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD-SIATK-RFDAQTGSDRE--VQRI 295
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ L L +DG S + ++ TN + LDPALLRPGR+D
Sbjct: 296 LIEL---LTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLD 335
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/195 (30%), Positives = 93/195 (47%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K +IM+ + F+K Y ++G RG +L GPPGTGK+ L A A
Sbjct: 347 FKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEA 405
Query: 278 NFDVYDL---ELTELRSN---SDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAG 329
Y + E E+ + +R L A N SI+ +++ID + + G
Sbjct: 406 GVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQK------G 459
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
G + + TL+ L +DG + D +++ TN + LD ALLRPGR D H+++
Sbjct: 460 NFSGANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRFDRHINID 517
Query: 390 YCTPSGFKLLAANYL 404
G K + A +L
Sbjct: 518 KPELEGRKAIFAVHL 532
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/165 (32%), Positives = 85/165 (51%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
+Q ++ + +E + D + RVG + +G LLYGPPGTGK+ L A+A+ + D
Sbjct: 149 QQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM-----DAN 203
Query: 286 LTELRSNSDLRTLLVATAN--RSILV-VEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
++ S++ + + +A R + D I D + A I G EG ++
Sbjct: 204 FLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 262
Query: 341 --TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
TL LN +DG + + G ++I+ TN + LDPALLRPGR+D
Sbjct: 263 QRTLMELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLD 305
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/165 (32%), Positives = 84/165 (50%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
+Q ++ + +E + + + RVG +G LLYGPPGTGK+ L A+A+ N D L+
Sbjct: 147 DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFLK 204
Query: 286 LTELRSNSDLRTLLVATAN--RSIL-VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV 340
+ S++ + + +A R + D I D + A I G EG ++
Sbjct: 205 IV---SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDA-IGGRRFSEGTSADREI 260
Query: 341 --TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
TL LN +DG + G ++I+ TN + LDPALLRPGR+D
Sbjct: 261 QRTLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLD 303
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/165 (30%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK +I + +E + + Y+++G RG LLYGPPGTGK+ L A+AN+ V
Sbjct: 163 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVG 222
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ ++++D R A + E +Q+
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATA--RFDAQTGADRE--VQR- 277
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 278 --ILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLD 318
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 66/214 (30%), Positives = 105/214 (49%)
Query: 181 SVQQESKTIKILTVNYNNLYCNWTDAWIPV-NLDHPAT--FETLAMEQEQKTKIMQDLER 237
SV KT+ ++ V ++ D + V LD T + + + Q +I + +E
Sbjct: 150 SVLLHHKTVAVVGVLQDD-----ADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVEL 204
Query: 238 FVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYDLELTE--LRSN 292
+ + Y +G +G +LYG PGTGK+ L A+AN + + EL + L
Sbjct: 205 PLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 264
Query: 293 SDL-RTLLVATANR--SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFI 349
L R + A+ SI+ +++ID I + R + GE E IQ+ + L LN +
Sbjct: 265 PRLCRQIFQIAADHAPSIVFIDEIDA-IGTK-RYESTSGGERE--IQRTMLEL---LNQL 317
Query: 350 DGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
DG + GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 318 DG-FDDRGDIKVIM-ATNKIESLDPALIRPGRID 349
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 66/228 (28%), Positives = 104/228 (45%)
Query: 213 DHP-ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 271
D P TF +A E ++ + ++ F++ Y+ +G +G LLYGPPGTGK+ L
Sbjct: 156 DMPKTTFADVAGVDEAVEELYE-IKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLAR 214
Query: 272 AMANYLN---FDVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRL 323
A+A F + + E+ S +R L S I+ V++ID + Q
Sbjct: 215 AVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA-VGRQRG- 272
Query: 324 PADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
AG G G ++ + TL+ L +DG G I++ TN + LDPALLRPGR D
Sbjct: 273 ----AGLGGGHDEREQ-TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGRFD 325
Query: 384 VHVHMSYCTPSGFK-LLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVA 430
+ +S +G + +L + G T +T A++A
Sbjct: 326 RQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLA 373
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/176 (32%), Positives = 90/176 (51%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K ++ +++ F++ + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R + A ++ + ID ID R AG
Sbjct: 213 AGVPFFTISGSDFVEMFVGVGASRVRDMF-EQAKKNAPCIVFID-EIDAVGRHRG--AGY 268
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG ++ G II+ TN K+ LDPALLRPGR D +V
Sbjct: 269 GGGNDEREQ-TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/176 (32%), Positives = 90/176 (51%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K ++ +++ F++ + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R + A ++ + ID ID R AG
Sbjct: 213 AGVPFFTISGSDFVEMFVGVGASRVRDMF-EQAKKNAPCIVFID-EIDAVGRHRG--AGY 268
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG ++ G II+ TN K+ LDPALLRPGR D +V
Sbjct: 269 GGGNDEREQ-TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/204 (28%), Positives = 92/204 (45%)
Query: 193 TVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAW 252
T NN+ N T+ F + E K ++ +++ F++ ++ R+G
Sbjct: 241 TSGLNNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEEL-EEIVDFLRDPTHFTRLGGKL 299
Query: 253 KRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL---ELTELRSNSDLRTL--LVATANR-- 305
RG LL GPPGTGK+ L A+A N + + + E+ + + L A A +
Sbjct: 300 PRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQA 359
Query: 306 -SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF 364
SI+ ++++D I Q R D A + + Q V L GF D + +
Sbjct: 360 PSIIFIDELDA-IG-QKRNARDAAHMRQ-TLNQLLVDLDGFSKNED-----LAHPVVFIG 411
Query: 365 TTNHKEKLDPALLRPGRMDVHVHM 388
TN E LDPAL RPGR D H+H+
Sbjct: 412 ATNFPESLDPALTRPGRFDRHIHV 435
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/166 (33%), Positives = 86/166 (51%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
+Q ++ + +E + + + RVG +G LLYGPPGTGK+ L A+A+ N D L+
Sbjct: 146 DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFLK 203
Query: 286 LTELRSNSDLRTLLVATAN--RSIL--VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNK 339
+ S++ + + +A R + E C I D + A I G EG +
Sbjct: 204 VV---SSAIIDKYIGESARLIREMFNYAREHQPCII-FMDEIDA-IGGRRFSEGTSADRE 258
Query: 340 V--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ TL LN +DG + + G ++I+ TN + LDPALLRPGR+D
Sbjct: 259 IQRTLMELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLD 302
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 62/187 (33%), Positives = 89/187 (47%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K ++ Q++ F+K+ + + VG +G LL GPPGTGK+ L A+A
Sbjct: 171 FDDVAGIDEAKEEL-QEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 278 N---FDVYDLELTELRSN---SDLRTLLV-ATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + E E+ S +R L A N L+ D ID R AG
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID---EIDAVGRQRG--AGI 284
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSY 390
G G ++ + TL+ L +DG + G II+ TN + LD AL+RPGR D V +
Sbjct: 285 GGGNDEREQ-TLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGRFDRQVMVDA 341
Query: 391 CTPSGFK 397
SG K
Sbjct: 342 PDYSGRK 348
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
+E + +E K ++++ ++ V + +++ G + RG L YGPPGTGK+ L A+AN
Sbjct: 498 WEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC 557
Query: 278 --NF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAG 329
NF V EL + S S++R + A ++ ++++D + D G
Sbjct: 558 AANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGG 617
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ + Q L +DG+ S ++ TN E+LD AL+RPGR+D V++
Sbjct: 618 ASDRVVNQ-------LLTEMDGMTSK--KNVFVIGATNRPEQLDAALVRPGRLDTLVYV 667
Score = 140 (54.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q +I + +E ++ ++ +G RG L+YGPPGTGK+ + A+AN + +
Sbjct: 231 RKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLI 290
Query: 285 ELTEL------RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ S S+LR S I+ +++ID +++ G ++
Sbjct: 291 NGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--------NGEVE 342
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+ V S L +DG+ +++ TN +DPAL R GR D V + P+G
Sbjct: 343 RRVV--SQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/166 (33%), Positives = 85/166 (51%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
+Q ++ + +E + + + RVG +G LLYGPPGTGK+ L A+A+ N D L+
Sbjct: 146 DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFLK 203
Query: 286 LTELRSNSDLRTLLVATAN--RSIL--VVEDIDCTIDLQDRLPADIAGE--GEGPIQQNK 339
+ S++ + + +A R + E C I D + A I G EG +
Sbjct: 204 VV---SSAIIDKYIGESARLIREMFNYAREHQPCII-FMDEIDA-IGGRRFSEGTSADRE 258
Query: 340 V--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ TL LN +DG + G ++I+ TN + LDPALLRPGR+D
Sbjct: 259 IQRTLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLD 302
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 137 (53.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 5 ATSAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFS---- 60
A++ K+ + I S S++A +L +T+ + +P I+D+ + KF + FS
Sbjct: 2 ASNLFTKIPSLSAIFSVYTSLSAFTILFKTILYEFIPVNIRDFI---ISKFTDYFSFYLN 58
Query: 61 SQLTIVIDEHDGLAKNQIYDAAKVYLGKKTSPSVQR-IKVSKLEKENHV---NISMESDE 116
S T +I+E NQ + AA+VYL S R + VS + +N + +
Sbjct: 59 SNFTFIIEEQSDYVMNQTFRAAQVYLPTLLSRITTRSLLVSSSDLKNPMAKPKFGIPVKA 118
Query: 117 QVVDVFNGIKLKWVLV 132
+++D F GI+L+W L+
Sbjct: 119 KIIDEFEGIRLEWTLL 134
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 61/202 (30%), Positives = 99/202 (49%)
Query: 193 TVNYNNLYCNWTDAWIPV-NLDHPAT--FETLAMEQEQKTKIMQDLERFVKRKDYYRRVG 249
TV+ + +D + V LD T + + + Q ++ + +E + + Y +G
Sbjct: 175 TVSVVGVLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMG 234
Query: 250 KAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSN--SD----LRTLLVATA 303
+G +LYG PGTGK+ L A+AN + + +EL D +R + A
Sbjct: 235 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAA 294
Query: 304 NR--SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERI 361
SI+ +++ID I + R + GE E IQ+ + L LN +DG + GD ++
Sbjct: 295 EHAPSIVFIDEIDA-IGTK-RYDSTSGGERE--IQRTMLEL---LNQLDG-FDDRGDVKV 346
Query: 362 IVFTTNHKEKLDPALLRPGRMD 383
I+ TN E LDPAL+RPGR+D
Sbjct: 347 IM-ATNKIETLDPALIRPGRID 367
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/188 (29%), Positives = 96/188 (51%)
Query: 212 LDHPATF-ETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
L+ P + + ++E KTK+ + ++ ++ + + R+G + +G LLYGPPG K+
Sbjct: 508 LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTA 567
Query: 271 AAMANY--LNF------DVYDLELTELRSNSDLRTLL--VATANRSILVVEDIDCTIDLQ 320
A+A +NF ++++ + E S +R + +A SI+ ++ID
Sbjct: 568 KALATESGINFLAVKGPEIFNKYVGE--SERAIREIFRKARSAAPSIIFFDEIDALSP-- 623
Query: 321 DRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPG 380
DR +G N V L+ LN IDG+ G +IV TN +++D ALLRPG
Sbjct: 624 DR-------DGSSTSAANHV-LTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPG 673
Query: 381 RMDVHVHM 388
R+D H+++
Sbjct: 674 RLDRHIYV 681
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 47/180 (26%), Positives = 80/180 (44%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
NL P ++ + ++ + +E + + + G + RG LL+GPPGTGK+ L+
Sbjct: 237 NLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLL 296
Query: 271 AAMANYLNFDVYDLELTELRSN--SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIA 328
+AN N V + + S + L N + I ID D + + A
Sbjct: 297 RVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSI-IFIDEIDSIAPNRA 355
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ G ++ V L +DG+ + G + +++ TN +DPAL RPGR D V +
Sbjct: 356 NDDSGEVESRVVAT--LLTLMDGM-GAAG-KVVVIAATNRPNSVDPALRRPGRFDQEVEI 411
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/177 (28%), Positives = 94/177 (53%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q ++++ + + K+ + ++G +G LLYGPPGTGK+ + A A N L
Sbjct: 176 EKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKL 235
Query: 285 ---ELTELRSNSDLRT-----LLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
+L ++ + LL + I+ +++ID I + R ++++G+ E +Q
Sbjct: 236 AGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDA-IGTK-RFDSEVSGDRE--VQ 291
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
+ + L LN +DG +SS D+RI ++ TN + LDPAL+R GR+D + + T
Sbjct: 292 RTMLEL---LNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 172 STYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 231
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL +R L V SI+ +++ID +I R+
Sbjct: 232 HTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-SSRVEGSR 289
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 290 GGDSE--VQRTMLEL---LNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 338
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 53/165 (32%), Positives = 85/165 (51%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG LLYGPPGTGK+ L A+A++ + V
Sbjct: 158 QKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVG 217
Query: 284 LELTE--LRSNSDL-RTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + L L R + +A N +I+ +++ID R A + E +Q+
Sbjct: 218 SEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIAT--KRFDAQTGADRE--VQR- 272
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
L LN +DG S + ++ TN ++ LDPALLRPGR+D
Sbjct: 273 --ILMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLD 313
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 156 (60.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/183 (31%), Positives = 87/183 (47%)
Query: 210 VNLDHPA--TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKS 267
++L+ P F + +Q ++ + +E +K + ++RVG +G LLYGPPGTGK+
Sbjct: 126 MSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKT 185
Query: 268 SLIAAMANYL--NF-DVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLP 324
L A+A+ + NF V + + R + E C I D +
Sbjct: 186 LLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK----EHEPCII-FMDEID 240
Query: 325 ADIAGE--GEGPIQQNKV--TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPG 380
A I G EG ++ TL LN +DG + G +II+ TN + LDPALLR G
Sbjct: 241 A-IGGRRFSEGTSADREIQRTLMELLNQLDG-FDYLGKTKIIM-ATNRPDTLDPALLRAG 297
Query: 381 RMD 383
R+D
Sbjct: 298 RLD 300
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/187 (30%), Positives = 95/187 (50%)
Query: 205 DAWI-PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPG 263
DA + P+ L + TFE + +E K ++ Q++ F+K + +G +G LL GPPG
Sbjct: 264 DAAVDPIQLKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPHKFTVLGGKLPKGILLVGPPG 321
Query: 264 TGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQD 321
TGK+ L A+A + Y +E ++ + A+ RS+ + C I + D
Sbjct: 322 TGKTLLARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRSLFREAKANAPCVIFI-D 377
Query: 322 RLPADIAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRP 379
L + + G+ E P+ ++ T++ L +DG + G +I+ TN E LD AL+RP
Sbjct: 378 ELDS-VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRP 434
Query: 380 GRMDVHV 386
GR D+ V
Sbjct: 435 GRFDMQV 441
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 64/191 (33%), Positives = 93/191 (48%)
Query: 204 TDAWIPV-NLDHPAT--FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYG 260
TD I V LD T + + + Q +I + +E + + Y +G +G +LYG
Sbjct: 173 TDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYG 232
Query: 261 PPGTGKSSLIAAMANYLN---FDVYDLELTE--LRSNSDL-RTLLVATANRS--ILVVED 312
PGTGK+ L A+AN + V EL + L L R L A S I+ +++
Sbjct: 233 APGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDE 292
Query: 313 IDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKL 372
ID I + R A E E IQ+ + L LN +DG +S D ++I+ TN L
Sbjct: 293 IDA-IGTK-RYDAQSGAERE--IQRTMLEL---LNQLDGFDTSQRDIKVIM-ATNRISDL 344
Query: 373 DPALLRPGRMD 383
DPAL+RPGR+D
Sbjct: 345 DPALIRPGRID 355
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 57/187 (30%), Positives = 95/187 (50%)
Query: 205 DAWI-PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPG 263
DA + P+ L + TFE + +E K ++ Q++ F+K + +G +G LL GPPG
Sbjct: 269 DAAVDPIQLKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPHKFTVLGGKLPKGILLVGPPG 326
Query: 264 TGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQD 321
TGK+ L A+A + Y +E ++ + A+ RS+ + C I + D
Sbjct: 327 TGKTLLARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRSLFREAKANAPCVIFI-D 382
Query: 322 RLPADIAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRP 379
L + + G+ E P+ ++ T++ L +DG + G +I+ TN E LD AL+RP
Sbjct: 383 ELDS-VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRP 439
Query: 380 GRMDVHV 386
GR D+ V
Sbjct: 440 GRFDMQV 446
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 68/246 (27%), Positives = 108/246 (43%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFE + E K ++ + +E F+K + + +G +G LL GPPGTGK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQELKEVVE-FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 277 LN---FDVYDLELTEL---RSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F E E+ + +R L A R+ V+ ID D + A
Sbjct: 357 AKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVI-----FIDEIDSVGAKRTNS 411
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSY 390
P T++ L+ +DG + G I++ TN ++ LD ALLRPGR DV V +S
Sbjct: 412 VLHPYANQ--TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVST 467
Query: 391 CTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLIEFL 450
+G K + + YL T+ T A++ E ++ ++G E +
Sbjct: 468 PDFTGRKEILSLYLTKILHDEIDLDMLARGTSGFTGADL-ENMINQAALRAAIDGA-ETV 525
Query: 451 KVKRKE 456
+K E
Sbjct: 526 SMKHLE 531
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 159 (61.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 58/172 (33%), Positives = 86/172 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A E+K ++++ +E F+K + VG +G LL GPPGTGK+ L A+A
Sbjct: 161 FRDVAGADEEKQELVEVVE-FLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEA 219
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEG 331
F + + E+ S +R L A ++ + ID ID R AG G
Sbjct: 220 GVPFFSISGSDFVEMFVGVGASRVRDLF-ENAKKNAPCIIFID-EIDAVGRQRG--AGLG 275
Query: 332 EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G ++ + TL+ L +DG ++ G II+ TN + LDPALLRPGR D
Sbjct: 276 GGHDEREQ-TLNQLLVEMDGFGANEGI--IIIAATNRPDILDPALLRPGRFD 324
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/179 (30%), Positives = 89/179 (49%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 302 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 360
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L V + IL +++ID + R + G
Sbjct: 361 NVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGR--GNFGG 418
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ E Q+N TL+ L +DG + +++ TN + LDPAL+RPGR D +++
Sbjct: 419 QSE---QEN--TLNQLLVEMDGF--NTATNVVVLAGTNRPDILDPALMRPGRFDRQIYI 470
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DVYD 283
QK ++ + +E + + Y ++G G L+YGPPGTGK+ L+ A+AN + F V
Sbjct: 146 QKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVG 205
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N SI+ ++++D R A + E +Q
Sbjct: 206 SEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIAT--KRFDAQTGADRE--VQ-- 259
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG S + ++ TN + LDPALLRPGR+D
Sbjct: 260 RILLE-LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLD 301
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DVYD 283
QK ++ + +E + + Y ++G G L+YGPPGTGK+ L+ A+AN + F V
Sbjct: 146 QKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVG 205
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N SI+ ++++D R A + E +Q
Sbjct: 206 SEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIAT--KRFDAQTGADRE--VQ-- 259
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG S + ++ TN + LDPALLRPGR+D
Sbjct: 260 RILLE-LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLD 301
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 60/195 (30%), Positives = 97/195 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A +E K ++++ ++ F+K + + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-ANRSILVVED----IDCTIDLQDRLPADIAGEG 331
N + + S SD + V A+R + E C I + D + A G
Sbjct: 215 ANVPFFSI------SGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFV-DEIDAVGRHRG 267
Query: 332 ---EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + TL+ L +DG S+ G +I+ TN + LDPALLRPGR D V +
Sbjct: 268 IGLGGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTI 325
Query: 389 SYCTPSGF-KLLAAN 402
S +G K++A +
Sbjct: 326 SIPDINGREKIIAVH 340
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 60/195 (30%), Positives = 97/195 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A +E K ++++ ++ F+K + + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-ANRSILVVED----IDCTIDLQDRLPADIAGEG 331
N + + S SD + V A+R + E C I + D + A G
Sbjct: 215 ANVPFFSI------SGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFV-DEIDAVGRHRG 267
Query: 332 ---EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + TL+ L +DG S+ G +I+ TN + LDPALLRPGR D V +
Sbjct: 268 IGLGGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTI 325
Query: 389 SYCTPSGF-KLLAAN 402
S +G K++A +
Sbjct: 326 SIPDINGREKIIAVH 340
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 55/183 (30%), Positives = 93/183 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA--N 275
F+ +A E K +I + ++ ++K + ++G RG LL GPPG GK+ L A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVD-YLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 276 YLNF-DVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAG 329
+ F + E E+ S +R L +R+ I+ +++ID I + A G
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDA-IGRKRSEGAGAGG 401
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
G + + TL+ L +DG+ S G+ +++ +TN + LD ALLRPGR D H+ +
Sbjct: 402 GFGGGSGEEEQTLNQLLVEMDGMGS--GNGVVVLASTNRADVLDKALLRPGRFDRHISID 459
Query: 390 YCT 392
T
Sbjct: 460 LPT 462
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 47/161 (29%), Positives = 81/161 (50%)
Query: 232 MQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL---ELTE 288
+Q+L +++K D + ++G G LL GPPG GK+ + A+A Y + E E
Sbjct: 442 LQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 501
Query: 289 LR---SNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGE-GEGPIQQNKVTL 342
+ ++ +R L A N+ S++ +++ID + + + + + Q+ + TL
Sbjct: 502 VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTL 561
Query: 343 SGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ L +DG G I + TN ++ LDPALLRPGR D
Sbjct: 562 NQLLIELDGF--DTGKGVIFLGATNRRDLLDPALLRPGRFD 600
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 155 (59.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 51/177 (28%), Positives = 93/177 (52%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q ++++ + + K+ + ++G +G LLYGPPGTGK+ + A A N L
Sbjct: 177 EKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKL 236
Query: 285 ---ELTELRSNSDLRTL-----LVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
+L ++ + + L I+ +++ID I + R ++++G+ E +Q
Sbjct: 237 AGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDA-IGTK-RFDSEVSGDRE--VQ 292
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
+ + L LN +DG +SS DERI ++ TN + LDPAL+R GR+D + + T
Sbjct: 293 RTMLEL---LNQLDG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 51/179 (28%), Positives = 84/179 (46%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
+E + E K + + ++ V + + + G + RG L YGPPGTGK+ L A+AN
Sbjct: 495 WEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC 554
Query: 278 --NF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAG 329
NF V EL + S S++R + A I+ ++++D + D G
Sbjct: 555 AANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGG 614
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ + Q L +DG+ S ++ TN E+LDPAL RPGR+D +++
Sbjct: 615 ASDRVVNQ-------LLTEMDGMTSK--KNVFVIGATNRPEQLDPALCRPGRLDSLIYV 664
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q +I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN + +
Sbjct: 228 RKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLI 287
Query: 285 ELTEL------RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ S S+LR S I+ +++ID +++ G ++
Sbjct: 288 NGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--------NGEVE 339
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+ V S L +DG+ +++ TN +DPAL R GR D V + P+G
Sbjct: 340 RRVV--SQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 394
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 228 KTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDL 284
K ++ + +E V D Y++ G A +G L +GPPGTGK+ L A+A + NF V
Sbjct: 497 KNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGP 556
Query: 285 ELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNK 339
EL + S S++R + A +++ ++++D + D G + + Q
Sbjct: 557 ELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQ-- 614
Query: 340 VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
L +DG+ + ++ TN +++DPALLRPGR+D +++
Sbjct: 615 -----LLTEMDGM--NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q +I + +E ++ ++ +G +G L+YGPPGTGK+ + A+AN + +
Sbjct: 221 KKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLI 280
Query: 285 ELTEL------RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ S S+LR A N SI+ +++ID +D+ G ++
Sbjct: 281 NGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT--------NGEVE 332
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+ V S L +DG+ +++ TN +DPAL R GR D V
Sbjct: 333 RRVV--SQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREV 378
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 228 KTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDL 284
K ++ + +E V D Y++ G A +G L +GPPGTGK+ L A+A + NF V
Sbjct: 497 KNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGP 556
Query: 285 ELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNK 339
EL + S S++R + A +++ ++++D + D G + + Q
Sbjct: 557 ELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQ-- 614
Query: 340 VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
L +DG+ + ++ TN +++DPALLRPGR+D +++
Sbjct: 615 -----LLTEMDGM--NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q +I + +E ++ ++ +G +G L+YGPPGTGK+ + A+AN + +
Sbjct: 221 KKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLI 280
Query: 285 ELTEL------RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ S S+LR A N SI+ +++ID +D+ G ++
Sbjct: 281 NGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT--------NGEVE 332
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+ V S L +DG+ +++ TN +DPAL R GR D V
Sbjct: 333 RRVV--SQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREV 378
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 159 (61.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 48/180 (26%), Positives = 88/180 (48%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + E K ++ + +E V D Y + G + +G L YGPPGTGK+ L A+A
Sbjct: 485 TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATE 544
Query: 277 L--NF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
+ NF V EL + S S++R + A +++ ++++D + D
Sbjct: 545 VSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAG 604
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + Q L +DG+ + ++ TN +++DPA+LRPGR+D +++
Sbjct: 605 GASDRVVNQ-------LLTEMDGM--NAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYV 655
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
++Q +I + +E ++ ++ +G RG L+YGPPGTGK+ + A+AN + +
Sbjct: 220 RKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLI 279
Query: 285 ELTEL------RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ S S+LR A N +I+ +++ID +D+ G ++
Sbjct: 280 NGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT--------NGEVE 331
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+ V S L +DG+ +++ TN +DPAL R GR D V + +G
Sbjct: 332 RRVV--SQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 60/175 (34%), Positives = 90/175 (51%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVG-KAWKRGYLLYGPPGTGKSSLIAAMANY 276
F+ +A +E K +IM+ + F+K Y+ +G K K+G +L GPPGTGK+ L A A
Sbjct: 98 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGE 156
Query: 277 LN---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIA 328
N V E E+ + +R L +A N IL +++ID + R +
Sbjct: 157 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFG 214
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E Q+N TL+ L +DG ++ +I+ TN + LDPALLRPGR D
Sbjct: 215 GQSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFD 262
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 158 (60.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 54/181 (29%), Positives = 83/181 (45%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
++D F + E K ++ +++ +++ + R+G +G LL GPPGTGK+ L
Sbjct: 219 SMDSSTKFSDVKGVDEAKAEL-EEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLA 277
Query: 271 AAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSI--LVVEDIDCT--IDLQDRLPAD 326
A+A + S S+ + V R + L C+ I D + A
Sbjct: 278 RAIAGEAGVPFFSC------SGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDA- 330
Query: 327 IAGEGEGPIQQN-KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVH 385
I G QQ K+TL+ L +DG + G I+V TN E LD AL+RPGR D H
Sbjct: 331 IGGSRNPKDQQYMKMTLNQMLVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRH 388
Query: 386 V 386
+
Sbjct: 389 I 389
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E+K ++++ +E F+K + +G +G LL GPPGTGK+ L A A
Sbjct: 160 FKDVAGADEEKQELVEVVE-FLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEA 218
Query: 278 N---FDVYDLELTELRSN---SDLRTLLV-ATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R L A N L+ D ID R AG
Sbjct: 219 GVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFID---EIDAVGRQRG--AGL 273
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G G ++ + TL+ L +DG S + II+ TN + LDPALLRPGR D
Sbjct: 274 GGGHDEREQ-TLNQLLVEMDGF--SANEGIIIIAATNRADILDPALLRPGRFD 323
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 166 (63.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 58/183 (31%), Positives = 93/183 (50%)
Query: 210 VNLDHP-ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
V L+ P +E + + E K ++M+ +E K +D ++R+G G L++GPPG K+
Sbjct: 714 VILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTL 773
Query: 269 LIAAMANY--LNF-DVYDLELTEL---RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQ 320
+ A+A+ LNF V EL S +R+L A AN SI+ ++ID ++
Sbjct: 774 MARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIR 833
Query: 321 DRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPG 380
+ E +G ++V +S L +DGL G ++ TN +K+D ALLRPG
Sbjct: 834 GK-------ENDGVSVSDRV-MSQLLVELDGLHQRVGVT--VIAATNRPDKIDSALLRPG 883
Query: 381 RMD 383
R D
Sbjct: 884 RFD 886
Score = 145 (56.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 50/164 (30%), Positives = 80/164 (48%)
Query: 231 IMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTEL- 289
I++D+ K+ +G +G L++GPPGTGK+SL A + + + + E+
Sbjct: 396 ILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEII 455
Query: 290 -----RSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSG 344
S L + + +N + VV ID DL PA G GE Q+ TL
Sbjct: 456 SQYLGESEKALDEVFRSASNATPAVVF-ID---DLDAIAPARKEG-GEELSQRMVATL-- 508
Query: 345 FLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
LN +DG+ S D +++ TN + ++PAL RPGR+D + +
Sbjct: 509 -LNLMDGI--SRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Score = 40 (19.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 5 ATSAENKLATAKTILSTAASVAATVMLARTVARDLLPYEIQDYFYFRLRKFCNRFSSQLT 64
A A + +K LS + VAA++ TV+ L E + F L +
Sbjct: 68 ADVASESIRGSKIWLSETSMVAASLSPGSTVSVSLASPESRFSRSFPLSSIKAEYGDDSE 127
Query: 65 IVIDEHDG--LAKNQIYDAAKVY 85
+I + G ++ ++KV+
Sbjct: 128 SIIADEPGNYFVLTTVFSSSKVF 150
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 54/175 (30%), Positives = 82/175 (46%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NFDVYD 283
EQ ++ + +E +K + + RVG +G LLYGPPGTGK+ L A+A + NF
Sbjct: 179 EQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSP 238
Query: 284 LE-LTELRSNSDLRTLLVATANRSILVVEDIDCTI--DLQDRLPADIAGEGEGPIQQNKV 340
+ + R + A E C I D D + EG ++ +
Sbjct: 239 ASAIVDKYIGESARLIREMFAYAK----EHEPCIIFMDEVDAIGGRRFSEGTSADREIQR 294
Query: 341 TLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
TL LN +DG + + G +II+ TN + LDPALLR GR+D + + +G
Sbjct: 295 TLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 52/175 (29%), Positives = 91/175 (52%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-- 275
F +A E K ++ + ++ ++K + Y+R+G RG LL GPPG GK+ L A+A
Sbjct: 340 FRDVAGLSEAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEA 398
Query: 276 ---YLNFDVYD-LELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEG 331
+L+ + + +E+ + +R L R+ ++ ID ID R + G
Sbjct: 399 QVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIY-ID-EIDAIGRQRSGTESMG 456
Query: 332 EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+G +++ TL+ L +DG+ + G +++ +TN + LD ALLRPGR D H+
Sbjct: 457 QGSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHI 509
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 157 (60.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 272 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 330 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 384
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 442
Query: 385 HV 386
V
Sbjct: 443 QV 444
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 158 (60.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + Q I + +E +K+ + ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANE 410
Query: 277 LNFDVYDLELTELRSN------SDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIA 328
+ V + E+ S + LR + R SI+ ++++D ++ +++
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV- 469
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGRMDVHVH 387
+ +V S L +DG+ S + R++V TN + LD AL RPGR D +
Sbjct: 470 --------EKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 388 M 388
+
Sbjct: 521 I 521
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 272 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 330 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 384
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 442
Query: 385 HV 386
V
Sbjct: 443 QV 444
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 272 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 330 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 384
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 442
Query: 385 HV 386
V
Sbjct: 443 QV 444
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 272 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 330 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 384
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 385 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 442
Query: 385 HV 386
V
Sbjct: 443 QV 444
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 68/301 (22%), Positives = 135/301 (44%)
Query: 123 NGIKLKWV-LVCRQVESRSFNHSSTNIQA----QVRYFELTFPKKYKDVVIGSYLP---- 173
N IK K + L ++E+ S N++S N + + +L+ +K KD + ++
Sbjct: 205 NIIKFKILKLSINKIENNSSNNNSNNNDDCDINSLDFNKLSLKEK-KDNIDNEFIKSIFR 263
Query: 174 -CVEKEAKSVQQESKTIKIL--TVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTK 230
C + K + ++ I T+N NN N ++ I N + F+++ Q +
Sbjct: 264 ICESTKIKLINSNLQSTLICESTINSNNNNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQ 323
Query: 231 IMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTEL- 289
I + ++ + D + G +G LLYGPPGTGK+ L +A N ++ + ++
Sbjct: 324 IRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADIL 383
Query: 290 -----RSNSDLRTLLVATANRS--ILVVEDID--C------TIDLQDRLPADIAGEGEGP 334
+ L+ + A +S I+ ++++D C + +++ R+ + +G
Sbjct: 384 DKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSEVEKRIVGSLLTLMDGV 443
Query: 335 IQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPS 394
+ + G + +G + GD+ I++ TN + +D AL RPGR D + +S
Sbjct: 444 VSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQ 503
Query: 395 G 395
G
Sbjct: 504 G 504
Score = 131 (51.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 65/225 (28%), Positives = 105/225 (46%)
Query: 176 EKEAKSVQQESKTIKILTVNYNNLYCNWT--DAWIPVNLDHPATF-ETLAMEQEQKTKIM 232
EK+ +++Q IK L++N L N + V ++ P F + ++ K K+
Sbjct: 577 EKQEENLQNLLSLIK-LSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLK 635
Query: 233 QDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LNF-DVYDLELTEL 289
+ +E +K + R+G +G LLYGPPG K+ L A+A LNF V EL
Sbjct: 636 EAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSK 695
Query: 290 ---RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSG 344
S +R + A N SIL ++ID L +GEG G +++ +S
Sbjct: 696 WVGESERAVRDIFKKARQNSPSILFFDEID-------GLAISRSGEGSGAVER---VVSQ 745
Query: 345 FLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
L +DG+ I+ TN + +D A+LR GR+D +++S
Sbjct: 746 LLTEMDGIQPLTNVT--IIGATNRPDIIDKAILRAGRIDRILYIS 788
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 158 (60.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + Q I + +E +K+ + ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANE 410
Query: 277 LNFDVYDLELTELRSN------SDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIA 328
+ V + E+ S + LR + R SI+ ++++D ++ +++
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV- 469
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGRMDVHVH 387
+ +V S L +DG+ S + R++V TN + LD AL RPGR D +
Sbjct: 470 --------EKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 388 M 388
+
Sbjct: 521 I 521
Score = 130 (50.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 55/208 (26%), Positives = 89/208 (42%)
Query: 185 ESKTIKILTVNYNNLYCNWTD----AWIPVNLDHP-ATFETLAMEQEQKTKIMQDLERFV 239
+SK ++ + N+ D A V +D P ++ + + K K+ Q +E +
Sbjct: 588 DSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPL 647
Query: 240 KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LNF-DVYDLELTELRSNSDLR 296
K + R+G +G LLYGPPG K+ + A+AN LNF + EL R
Sbjct: 648 KHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESER 707
Query: 297 TLLVATANRSILVVEDIDCTIDLQDRLPADI-AGEGEGPIQQNKVTLSGFLNFIDGLWSS 355
V R V D D L + + G G + L+ L +DG+
Sbjct: 708 A--VREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADR--VLAQLLTEMDGI-EQ 762
Query: 356 CGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ ++ TN +++D AL+RPGR+D
Sbjct: 763 LKNVTVLA-ATNRPDRIDKALMRPGRID 789
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 157 (60.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 306 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 363
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 364 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 418
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 419 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 476
Query: 385 HV 386
V
Sbjct: 477 QV 478
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 325 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 382
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 383 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 437
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 438 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 495
Query: 385 HV 386
V
Sbjct: 496 QV 497
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 330 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTL 387
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 388 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 442
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 443 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 500
Query: 385 HV 386
V
Sbjct: 501 QV 502
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 153 (58.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 54/167 (32%), Positives = 86/167 (51%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
+ Q ++ + +E + + Y +G +G +LYG PGTGK+ L A+AN + V
Sbjct: 190 EAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRV 249
Query: 282 YDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + L L L A+ SI+ +++ID + + R + GE E IQ
Sbjct: 250 VGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDA-VGTK-RYDSQSGGERE--IQ 305
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ + L LN +DG + + D ++I+ TN E LDPAL+RPGR+D
Sbjct: 306 RTMLEL---LNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRID 347
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 160 (61.4 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 56/166 (33%), Positives = 80/166 (48%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LNF-DV 281
++ KT I+ ++ + KD + G + G LLYGPPGTGK+ L A+A LNF V
Sbjct: 664 EDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 722
Query: 282 YDLELTEL---RSNSDLRTLLV-ATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ 337
EL + S ++R + A + R ++ D +L PA A G +
Sbjct: 723 KGPELINMYIGESEKNVRDIFEKARSARPCVIFFD-----ELDSLAPARGASGDSGGVMD 777
Query: 338 NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
V S L IDGL S + I+ +N + +DPALLRPGR D
Sbjct: 778 RVV--SQMLAEIDGL-SDSSQDLFIIGASNRPDLIDPALLRPGRFD 820
Score = 44 (20.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 16/85 (18%), Positives = 37/85 (43%)
Query: 367 NHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTP 426
+++E++ AL R ++ V + Y S K + + G + +V+
Sbjct: 832 SYRERVLKALTRKFKLSEDVSL-Y---SVAKKCPSTFTGADMYALCADAWFQAAKRKVSK 887
Query: 427 AEVAEQLMRNDDPELVLNGLIEFLK 451
++ + DDP+ V+ ++F+K
Sbjct: 888 SDSGDMPTEEDDPDSVVVEYVDFIK 912
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 155 (59.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 57/179 (31%), Positives = 90/179 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y +G +G +L GPPGTGK+ L A A
Sbjct: 151 FKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 209
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 210 NVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 267
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ E Q+N TL+ L +DG ++ +I+ TN + LDPAL+RPGR D +++
Sbjct: 268 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIYI 319
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 156 (60.0 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 55/175 (31%), Positives = 82/175 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++ +++ F+K D Y R+G RG LL G PGTGK+ L A+A
Sbjct: 327 TFADVAGVDEAKEEL-EEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 277 LNFDVYDL---ELTEL---RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIA 328
+ E EL S +R L SI+ +++ID +D ++
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVS 445
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ + + TL+ L +DG SS I++ TN + LDPAL RPGR D
Sbjct: 446 ND------EREQTLNQLLTEMDGFDSSSAV--IVLGATNRADVLDPALRRPGRFD 492
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/182 (29%), Positives = 91/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ QD+ F++ + +G +G LL GPPGTGK+
Sbjct: 286 PVQMKN-ITFEHVKGVEEAKNEL-QDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTL 343
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ C I + D L +
Sbjct: 344 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFKEAKASAPCVIFI-DELDS- 398
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G I++ TN E LD AL+RPGR D+
Sbjct: 399 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IVIGATNFAEALDNALVRPGRFDM 456
Query: 385 HV 386
V
Sbjct: 457 QV 458
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/177 (33%), Positives = 87/177 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E K ++ ++L F++ ++R+G G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGVDEAKEEV-KELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R + ++ ++ ID ID R AG
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIF-ID-EIDAVGRHRG--AGL 268
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT-TNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG G E IIV TN + LDPALLRPGR D V
Sbjct: 269 GGGHDEREQ-TLNQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPGRFDRQV 321
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/174 (33%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 307 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 365
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 366 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 423
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E Q+N TL+ L +DG ++ +I+ TN + LDPALLRPGR D
Sbjct: 424 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFD 470
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/174 (33%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 306 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 422
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E Q+N TL+ L +DG ++ +I+ TN + LDPALLRPGR D
Sbjct: 423 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFD 469
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/174 (33%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 306 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 422
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E Q+N TL+ L +DG ++ +I+ TN + LDPALLRPGR D
Sbjct: 423 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFD 469
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 57/179 (31%), Positives = 90/179 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y +G +G +L GPPGTGK+ L A A
Sbjct: 307 FKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 365
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 366 NVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 423
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ E Q+N TL+ L +DG ++ +I+ TN + LDPAL+RPGR D +++
Sbjct: 424 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIYI 475
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 52/176 (29%), Positives = 94/176 (53%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + +Q ++++ + +KR D ++ +G +G L+YGPPGTGK+ L A A
Sbjct: 179 TYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 238
Query: 277 LNFDVYDL---ELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N L +L ++ + + A A +I+ ++++D I + R ++ +
Sbjct: 239 TNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDA-IGTK-RFDSEKS 296
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ + L LN +DG +SS D+R+ ++ TN + LDPALLR GR+D
Sbjct: 297 GDRE--VQRTMLEL---LNQLDG-FSS--DDRVKVLAATNRVDVLDPALLRSGRLD 344
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 54/182 (29%), Positives = 92/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F++ + +G +G LL GPPGTGK+
Sbjct: 279 PVQMKN-VTFEHVKGVEEAKNEL-QEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTL 336
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 337 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKGNAPCVIFI-DELDS- 391
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T++ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 392 VGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 449
Query: 385 HV 386
V
Sbjct: 450 QV 451
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFD---VYD 283
QK +I + +E + Y+++G RG LL+GPPG GK+ L A+A++ V
Sbjct: 160 QKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVG 219
Query: 284 LELTELRSNSD---LRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + +R L +A N SI+ +++ID R A + E +Q
Sbjct: 220 SEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 273
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
++ L LN +DG + + ++ TN + LDPALLRPGR+D + +
Sbjct: 274 RILLE-LLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLDRKIEL 320
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/186 (30%), Positives = 90/186 (48%)
Query: 211 NLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 270
N+D F +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L
Sbjct: 294 NID--VRFADVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLA 350
Query: 271 AAMANYLN---FDVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDR 322
A A N V E E+ + +R + + IL +++ID + R
Sbjct: 351 KATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGR 410
Query: 323 LPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRM 382
+ G+ E Q+N TL+ L +DG SS +++ TN + LDPAL RPGR
Sbjct: 411 --GHLGGQSE---QEN--TLNQMLVEMDGFNSSTNV--VVLAGTNRPDILDPALTRPGRF 461
Query: 383 DVHVHM 388
D +++
Sbjct: 462 DRQIYI 467
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 53/194 (27%), Positives = 91/194 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T+E + + K ++ + ++ V+ + +R+ G +G L YGPPG GK+ L A+AN
Sbjct: 473 TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 276 -YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
NF + EL + S +++R L A +L +++D + D
Sbjct: 533 CQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAG 592
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G G+ I Q L +DG+ + I+ TN + +DPA+LRPGR+D +++
Sbjct: 593 GAGDRVINQ-------ILTEMDGM--NAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
Query: 389 SYCT-PSGFKLLAA 401
PS +L A
Sbjct: 644 PLPDLPSRVAILKA 657
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/186 (26%), Positives = 91/186 (48%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
++ + ++Q +I + +E ++ ++ +G +G LLYGPPG GK+ + A+AN
Sbjct: 201 YDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANET 260
Query: 278 N---FDVYDLEL-TEL--RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAG 329
F + E+ ++L S S+LR A N SI+ +++ID +++
Sbjct: 261 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT------ 314
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
+G +++ V S L +DGL S I++ TN +DPAL R GR D + ++
Sbjct: 315 --QGEVERRIV--SQLLTLMDGLKSRA--HVIVMGATNRPNSIDPALRRFGRFDREIDIT 368
Query: 390 YCTPSG 395
+G
Sbjct: 369 IPDATG 374
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/154 (31%), Positives = 86/154 (55%)
Query: 239 VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL---ELTELRSNSDL 295
+++ D +R++G +G L++GPPGTGK+ L A A N L +L ++
Sbjct: 205 MQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGA 264
Query: 296 RTLLVATA-----NRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFID 350
+ + A A + +I+ ++++D I + R ++ AG+ E +Q+ + L LN +D
Sbjct: 265 KLVRDAFALAKEKSPAIIFIDELDA-IGTK-RFDSEKAGDRE--VQRTMLEL---LNQLD 317
Query: 351 GLWSSCGDERI-IVFTTNHKEKLDPALLRPGRMD 383
G +SS D+R+ ++ TN + LDPALLR GR+D
Sbjct: 318 G-FSS--DDRVKVIAATNRVDTLDPALLRSGRLD 348
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 130 (50.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 73/253 (28%), Positives = 105/253 (41%)
Query: 146 TNIQAQVRYFELTFPKKYKDVV---IGSYLPCVEKEAKSVQQESKTIK-ILTVNYNNLYC 201
TN+ Y P V+ I S P E+ Q S TIK ++T+ L
Sbjct: 132 TNVYVSPHYVVTVGPNVRAPVLHVEILSVDPVTEEAGLITPQTSVTIKEVITLERYRLLT 191
Query: 202 NWTDAWIPV-NLDHPATFETLAMEQEQKTKIMQDLE-RFVKRKDYYRRVGKAWKRGYLLY 259
T A IPV LD E+L K M DL RF + ++++G + G LL
Sbjct: 192 EDT-AKIPVAGLDDVG--ESL--------KEMVDLPFRFPRT---FKKLGLSVPNGVLLV 237
Query: 260 GPPGTGKSSLIAAMANYLNFDVYDLELTEL------RSNSDLRTLLVATANRSILVVEDI 313
GPPG GK+ L+ A+A + + L S +LR+ V R +
Sbjct: 238 GPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRS--VFEKGREMSCEGPT 295
Query: 314 DCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLD 373
ID D L P ++++ ++ L +DG+ D ++V TN + LD
Sbjct: 296 VLFIDEIDALCPKRGSSNSAP--EDRL-VAQLLTLLDGVGRK--DRMVVVAATNRPDALD 350
Query: 374 PALLRPGRMDVHV 386
PAL RPGR D V
Sbjct: 351 PALRRPGRFDREV 363
Score = 109 (43.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 215 PATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P T+E + ++ K K+ Q +E +K + R+G A +G LLYGP G K++L+ A+A
Sbjct: 459 PITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVA 518
Query: 275 NYLNFDVYDLELTELRSN--SDLRTLLV-----ATANR-SILVVEDIDCTIDLQDRLPAD 326
+ + EL S D +L A AN +I+ +++ID + +
Sbjct: 519 TSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSH---- 574
Query: 327 IAGEGEGPIQQNKVTLSGFLNFIDGL 352
+ G G ++ LS LN +DG+
Sbjct: 575 -SKSGHGVSER---VLSVLLNELDGV 596
Score = 70 (29.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 361 IIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFK 397
++V TN + LD ALLRPGR+D + Y P K
Sbjct: 623 MVVAATNRPDMLDDALLRPGRLD---RVIYIPPPDLK 656
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 63/264 (23%), Positives = 116/264 (43%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T+E + ++ K ++ + ++ V+ D + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
NF + EL + S +++R + A +L +++D + +I
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNI- 590
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G+G G + ++ L +DG+ S I+ TN + +DPA+LRPGR+D +++
Sbjct: 591 GDGGGAADR---VINQILTEMDGM--SIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 389 SYCTP-SGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLI 447
S +L AN T + A++ E R +L + I
Sbjct: 646 PLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRAC--KLAIRESI 703
Query: 448 EFLKVKRKEDEDAKPRKIHEESTE 471
E +++R+ D P + E +
Sbjct: 704 EN-EIRRERDRQTNPSAMEVEEDD 726
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 52/179 (29%), Positives = 86/179 (48%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
++Q +I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 210 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 282 YDLEL-TEL--RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ ++L S S+LR A N +I+ ++++D +++ GE E I
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH----GEVERRI- 324
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+S L +DGL I++ TN +DPAL R GR D V + +G
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/174 (32%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 308 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 424
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E Q+N TL+ L +DG ++ +I+ TN + LDPAL+RPGR D
Sbjct: 425 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFD 471
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 65/265 (24%), Positives = 118/265 (44%)
Query: 217 TFETLAMEQEQKTKIMQDLERF-VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
T+E + ++ K ++ QDL ++ V+ D + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKREL-QDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 276 --YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADI 327
NF + EL + S +++R + A +L +++D + +I
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNI 590
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVH 387
G+G G + ++ L +DG+ S I+ TN + +DPA+LRPGR+D ++
Sbjct: 591 -GDGGGAADR---VINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 388 MSYCTP-SGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGL 446
+ S +L AN T + A++ E R +L +
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC--KLAIRES 702
Query: 447 IEFLKVKRKEDEDAKPRKIHEESTE 471
IE +++R+ + P + E +
Sbjct: 703 IES-EIRRERERQTNPSAMEVEEDD 726
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 52/179 (29%), Positives = 86/179 (48%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
++Q +I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 210 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 282 YDLEL-TEL--RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ ++L S S+LR A N +I+ ++++D +++ GE E I
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH----GEVERRI- 324
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+S L +DGL I++ TN +DPAL R GR D V + +G
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/174 (32%), Positives = 88/174 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 308 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
N V E E+ + +R L +A N IL +++ID + R + G
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR--GNFGG 424
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+ E Q+N TL+ L +DG ++ +I+ TN + LDPAL+RPGR D
Sbjct: 425 QSE---QEN--TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFD 471
>TAIR|locus:2132922 [details] [associations]
symbol:AT4G28000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00546324 RefSeq:NP_194529.4
UniGene:At.54531 ProteinModelPortal:F4JKF8 SMR:F4JKF8 PRIDE:F4JKF8
EnsemblPlants:AT4G28000.1 GeneID:828913 KEGG:ath:AT4G28000
OMA:GAVMNEL ArrayExpress:F4JKF8 Uniprot:F4JKF8
Length = 830
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 51/181 (28%), Positives = 89/181 (49%)
Query: 208 IPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWK--RGYLLYGPPGTG 265
IP N + TF + E K + + + ++R D ++ G K RG LL+GPPGTG
Sbjct: 508 IPAN-EIGVTFADIGSLDETKESLQELVMLPLRRPDLFK--GGLLKPCRGILLFGPPGTG 564
Query: 266 KSSLIAAMANYLNFDVYDLELTELRSN------SDLRTL--LVATANRSILVVEDIDCTI 317
K+ + A+AN ++ ++ + S ++R L L A + +I+ V+++D +
Sbjct: 565 KTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSML 624
Query: 318 DLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALL 377
+ R+ GE E K+ + F+ DGL S+ GD +++ TN LD A++
Sbjct: 625 GQRTRV-----GEHEA---MRKIK-NEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAII 675
Query: 378 R 378
R
Sbjct: 676 R 676
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/171 (32%), Positives = 79/171 (46%)
Query: 243 DYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTELRSNSDLRTLL 299
+ + RVG +G LLYGPPGTGK+ L A+A+ L NF V + + R +
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVI- 219
Query: 300 VATANRSILVVEDIDCTIDLQDRLPADIAGE--GEGPIQQNKV--TLSGFLNFIDGLWSS 355
D + D + A I G EG ++ TL LN +DG + +
Sbjct: 220 ----REMFGYARDHQPCVIFMDEIDA-IGGRRFSEGTSADREIQRTLMELLNQMDG-FDT 273
Query: 356 CGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG----FKLLAAN 402
+II+ TN + LDPALLRPGR+D + + +G K+ AAN
Sbjct: 274 LSKVKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAAN 323
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 72/291 (24%), Positives = 119/291 (40%)
Query: 171 YLPCVEKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTK 230
+LP + S+ E+ T+K N + D N P +F+ + QE K +
Sbjct: 256 WLPVLLFLVYSLTSETSTVKEANGNKPQYFAKEYDE---TN-QTPTSFDDVKGIQEVKEE 311
Query: 231 IMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELR 290
+ +++ ++ Y +G +G LL G PGTGK+ L A+A L
Sbjct: 312 L-EEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSF----LYTTG 366
Query: 291 SNSDLRTLLVATAN-RSILVV--EDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLN 347
S+ D + + V + R + E C I + + D G+ N+ TL L
Sbjct: 367 SSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDE---IDAVGKSRNTAHHNE-TLLQLLT 422
Query: 348 FIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGXX 407
+DG + + +I+ TN LDPALLRPGR D H+ + G + +YL
Sbjct: 423 EMDGFEGN--SQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKV 480
Query: 408 XXXXXXXXXXXXSTTQ-VTPAEVAEQLMRNDDPELVLNGLIEFLKVKRKED 457
T T A+++ L+ + V NG E + +K+ +D
Sbjct: 481 KHTVEVKADTIARATPGFTGADLSN-LINTAAIKAVQNGK-ETISIKQIDD 529
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/183 (27%), Positives = 93/183 (50%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K ++ + ++ ++K D Y ++G +G LL GPPG GK+ L A+A
Sbjct: 281 FKDVAGMHEAKMEVKEFVD-YLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 339
Query: 278 NFDVYDL---ELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAG 329
+ E E+ + +R+L R+ I+ +++ID + + +++G
Sbjct: 340 QVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDA---VGKKRSTNVSG 396
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
+Q TL+ L +DG+ ++ D I++ +TN + LD AL+RPGR+D H+ +
Sbjct: 397 FANAEEEQ---TLNQLLVEMDGMGTT--DHVIVLASTNRADVLDNALMRPGRLDRHIFID 451
Query: 390 YCT 392
T
Sbjct: 452 LPT 454
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 56/186 (30%), Positives = 90/186 (48%)
Query: 210 VNLDHPAT-FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
VN + P F +A +E K ++ + ++ F+K + Y ++G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 269 LIAAMANYLN---FDVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQ 320
L A+A + F V E+ S +R L + I+ +++ID I +
Sbjct: 227 LAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDA-IG-K 284
Query: 321 DRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPG 380
R + + G + + + TL+ L +DG + I++ TN E LD ALLRPG
Sbjct: 285 SRAASGMMGGND----EREQTLNQLLAEMDGFGTESSPV-IVLAATNRPEVLDAALLRPG 339
Query: 381 RMDVHV 386
R D V
Sbjct: 340 RFDRQV 345
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + Q +I + +E +K+ + ++ G + RG LLYGPPGTGK+ + A+AN
Sbjct: 345 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANE 404
Query: 277 LNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDI-DCTIDLQDRLPADIAGEGEGPI 335
+ V + E+ S T R I + +I D L A + + EG
Sbjct: 405 VGAYVSVINGPEIISKFYGET---EARLRQIFAEATLRHPSIIFIDELDA-LCPKREGAQ 460
Query: 336 QQ-NKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGRMDVHVHM 388
+ K ++ L +DG+ S + +++V TN LD AL RPGR D + +
Sbjct: 461 NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 515
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA--NYLNF-DVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A +F V
Sbjct: 169 QKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVG 228
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N SI+ +++ID R A + E +Q
Sbjct: 229 SEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 282
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG S + ++ TN ++ LDPALLRPGR+D
Sbjct: 283 RILLE-LLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLD 324
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/182 (28%), Positives = 84/182 (46%)
Query: 203 WTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPP 262
W + N A+++ + ++ K ++ D F K + Y ++ WKRG + YGPP
Sbjct: 177 WNKSRELFNSIRKASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPP 236
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDIDCTIDLQDR 322
G GK+ I A N L + + D + L S L + + A S++ +
Sbjct: 237 GNGKTVSIKATMNML-YKLKD-PVPTLYVRS-LVSWMGPEAALSMIFS-------GARAM 286
Query: 323 LPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALL-RPGR 381
P + E I + V S FLN +DGL ++ D ++ +TNH E+LDP + RP R
Sbjct: 287 APCYLVFEDLDSIVNDSVR-SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSR 343
Query: 382 MD 383
D
Sbjct: 344 FD 345
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/182 (30%), Positives = 91/182 (50%)
Query: 209 PVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 268
PV + + TFE + +E K ++ Q++ F+K + +G +G LL GPPGTGK+
Sbjct: 272 PVQMKN-VTFEHVKGVEEAKQEL-QEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVATANRSIL--VVEDIDCTIDLQDRLPAD 326
L A+A + Y +E ++ + A+ R++ + C I + D L +
Sbjct: 330 LARAVAGEADVPFYYASGSEF---DEMFVGVGASRIRNLFREAKANAPCVIFI-DELDS- 384
Query: 327 IAGEG-EGPIQQ-NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
+ G+ E P+ ++ T+ L +DG + G II+ TN E LD AL+RPGR D+
Sbjct: 385 VGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDM 442
Query: 385 HV 386
V
Sbjct: 443 QV 444
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 57/181 (31%), Positives = 89/181 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++++ ++ F+K + ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-ANRSILVVE----DIDCTIDLQDRLPADIAGEG 331
N + + S SD + V A+R + E + C I + D + A G
Sbjct: 213 ANVPFFSI------SGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFI-DEIDAVGRHRG 265
Query: 332 ---EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + TL+ L +DG S+ G II+ TN + LD ALLRPGR D V +
Sbjct: 266 IGLGGGNDEREQTLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTI 323
Query: 389 S 389
S
Sbjct: 324 S 324
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 57/181 (31%), Positives = 89/181 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++++ ++ F+K + ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-ANRSILVVE----DIDCTIDLQDRLPADIAGEG 331
N + + S SD + V A+R + E + C I + D + A G
Sbjct: 213 ANVPFFSI------SGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFI-DEIDAVGRHRG 265
Query: 332 ---EGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G + + TL+ L +DG S+ G II+ TN + LD ALLRPGR D V +
Sbjct: 266 IGLGGGNDEREQTLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTI 323
Query: 389 S 389
S
Sbjct: 324 S 324
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + Q I + +E +K+ + ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 277 LNFDVYDLELTELRSN------SDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIA 328
+ V + E+ S + LR + R SI+ ++++D ++ ++
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV- 469
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGRMDVHVH 387
+ +V S L +DG+ S + +++V TN LD AL RPGR D +
Sbjct: 470 --------EKRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIE 520
Query: 388 M 388
+
Sbjct: 521 I 521
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 228 KTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT 287
K K+ Q +E +K + + R+G +G LLYGPPG K+ + A+AN + ++
Sbjct: 636 KLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGP 695
Query: 288 ELRSN--SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE-GEGPIQQNKVTLSG 344
EL + + + T ++ V I D D L + G G + L+
Sbjct: 696 ELMNKYVGESERAVRETFRKARAVAPSI-IFFDELDALAVERGSSLGAGNVADR--VLAQ 752
Query: 345 FLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
L +DG+ D I+ TN +++D AL+RPGR+D
Sbjct: 753 LLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRID 789
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 62/264 (23%), Positives = 116/264 (43%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T+E + ++ K ++ + ++ V+ D + + G +G L YGPPG GK+ L A+AN
Sbjct: 207 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 266
Query: 276 -YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
NF + EL + S +++R + A +L +++D + +I
Sbjct: 267 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNI- 322
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G+G G + ++ L +DG+ S I+ TN + +DPA+LRPGR+D +++
Sbjct: 323 GDGGGAADR---VINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 377
Query: 389 SYCTP-SGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLI 447
S +L AN T + A++ E R +L + I
Sbjct: 378 PLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC--KLAIRESI 435
Query: 448 EFLKVKRKEDEDAKPRKIHEESTE 471
E +++R+ + P + E +
Sbjct: 436 ES-EIRRERERQTNPSAMEVEEDD 458
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 56/184 (30%), Positives = 86/184 (46%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
D F +A +E K +IM+ + F+K Y+ +G +G +L GPPGTGK+ L A
Sbjct: 287 DIKVKFADVAGCEEAKIEIMEFVN-FLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKA 345
Query: 273 MANYLN---FDVYDLELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRLP 324
A N V E E+ + +R + S IL +++ID R
Sbjct: 346 TAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAV----GRKR 401
Query: 325 ADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
G G Q+N TL+ L +DG +++ I++ TN + LD ALLRPGR D
Sbjct: 402 GGKGGMGGHSEQEN--TLNQLLVEMDG-FTTDESSVIVIAATNRVDILDSALLRPGRFDR 458
Query: 385 HVHM 388
+++
Sbjct: 459 QIYV 462
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + Q +I + +E +K+ + ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 342 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 401
Query: 277 LNFDVYDLELTELRSNSDLRTLLVATANRSILVVEDI-DCTIDLQDRLPADIAGEGEGPI 335
+ V + E+ S T R I + +I D L A + + EG
Sbjct: 402 VGAYVSVINGPEIISKFYGET---EARLRQIFAEATLRHPSIIFIDELDA-LCPKREGAQ 457
Query: 336 QQ-NKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGRMDVHVHM 388
+ K ++ L +DG+ S + +++V TN LD AL RPGR D + +
Sbjct: 458 NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 512
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/177 (32%), Positives = 88/177 (49%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E K ++ + +E +++ ++++G +G L+ GPPGTGK+ L A+A
Sbjct: 150 TFADVAGCDEAKEEVAELVE-YLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208
Query: 277 LN---FDVYDLELTELRSN---SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGE 330
F + + E+ S +R + A ++ + ID ID R AG
Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMF-EQAKKAAPCIIFID-EIDAVGRQRG--AGL 264
Query: 331 GEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT-TNHKEKLDPALLRPGRMDVHV 386
G G ++ + TL+ L +DG G+E IIV TN + LDPALLRPGR D V
Sbjct: 265 GGGHDEREQ-TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 317
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFD---VYD 283
QK +I + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 168 QKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVG 227
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 228 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 281
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 282 RILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 323
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 50/184 (27%), Positives = 95/184 (51%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+F+ +A +E K ++ + ++ ++K D Y ++G +G LL GPPG GK+ L A+A
Sbjct: 298 SFKDVAGMREAKMEVKEFVD-YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATE 356
Query: 277 LNFDVYDL---ELTELRSN---SDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIA 328
+ E E+ + +R+L R+ I+ +++ID + + +++
Sbjct: 357 AQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDA---VGKKRSTNMS 413
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G +Q TL+ L +DG+ ++ D I++ +TN + LD AL+RPGR+D H+ +
Sbjct: 414 GFSNTEEEQ---TLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALMRPGRLDRHIFI 468
Query: 389 SYCT 392
T
Sbjct: 469 DLPT 472
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/180 (27%), Positives = 86/180 (47%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + +EQ K+ + +E + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 36 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 95
Query: 277 LN---FDVYDLELTELRSNSDLRTLL----VATANRSILVVEDIDCTIDLQDRLPADIAG 329
+ V EL + R + +A ++ L+ D ID D
Sbjct: 96 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD---EIDAIGGARFDDGA 152
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
G+ +Q+ + L +N +DG + G+ ++++ TN + LDPAL+RPGR+D + S
Sbjct: 153 GGDNEVQRTMLEL---INQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 207
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 60/189 (31%), Positives = 93/189 (49%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K +IM+ + +F++ Y ++G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 344
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
V E E+ S +R L TA +I+ V++ID I ++R +
Sbjct: 345 GVPFLSVSGSEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVDEIDA-IG-KERGNGRMG 401
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G E ++N TL+ L +DG ++ D +++ TN + LD ALLRPGR D H+ +
Sbjct: 402 GNDE---REN--TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISI 454
Query: 389 SYCTPSGFK 397
G K
Sbjct: 455 DVPDVEGRK 463
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 60/189 (31%), Positives = 93/189 (49%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F+ +A E K +IM+ + +F++ Y ++G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 344
Query: 278 N---FDVYDLELTELRSN---SDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
V E E+ S +R L TA +I+ V++ID I ++R +
Sbjct: 345 GVPFLSVSGSEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVDEIDA-IG-KERGNGRMG 401
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G E ++N TL+ L +DG ++ D +++ TN + LD ALLRPGR D H+ +
Sbjct: 402 GNDE---REN--TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISI 454
Query: 389 SYCTPSGFK 397
G K
Sbjct: 455 DVPDVEGRK 463
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 56/202 (27%), Positives = 92/202 (45%)
Query: 210 VNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 269
V + H +E + E K ++ + ++ V+ D + + G RG L YGPPG GK+ L
Sbjct: 471 VEVPH-VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 270 IAAMAN--YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQD 321
A+AN NF + EL + S +++R + A IL +++D +
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 322 RLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGR 381
D G + I Q L +DG+ + I+ TN + +DPA+LRPGR
Sbjct: 590 GGAGDAGGAADRVINQ-------ILTEMDGMTNK--KNVFIIGATNRPDIIDPAILRPGR 640
Query: 382 MDVHVHMSYCT-PSGFKLLAAN 402
+D +++ PS +L AN
Sbjct: 641 LDQLIYIPLPDMPSRTAILRAN 662
Score = 120 (47.3 bits), Expect = 0.00081, P = 0.00081
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
++Q +I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 212 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANETGAFFFLI 271
Query: 282 YDLEL-TEL--RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ ++L S S+LR A N +I+ ++++D +++ GE E I
Sbjct: 272 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH----GEVERRI- 326
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+S L +DGL +++ TN +D AL R GR D + + +G
Sbjct: 327 -----VSQLLTLMDGLKQRA--HVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTG 378
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 150 (57.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/174 (28%), Positives = 81/174 (46%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q + ++ + + +KR + Y +VG + G LL+GPPG GK+ L A+AN
Sbjct: 531 TWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANE 590
Query: 277 LNFDVYDLELTELRSNSDLRTLLVATANRSILVV-----EDIDCTIDLQDRLPADIAGEG 331
+ ++ EL + V + RSI V + C I D L A +
Sbjct: 591 SRANFISIKGPELLNK------YVGESERSIRQVFTRARASVPCVIFF-DELDALVPRRD 643
Query: 332 EGPIQQNKVTLSGFLNFIDGLWSSCGDER--IIVFTTNHKEKLDPALLRPGRMD 383
+ + ++ L +DGL D R ++ TN + +DPA+LRPGR+D
Sbjct: 644 TSLSESSSRVVNTLLTELDGL----NDRRGIFVIGATNRPDMIDPAMLRPGRLD 693
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 172 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 231
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 232 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 285
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 286 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 327
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 227 QKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYD 283
QK ++ + +E + + Y+++G RG L+YGPPG GK+ L A+A++ V
Sbjct: 173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 232
Query: 284 LELTELRSNSDLRTLL----VATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
E + R + +A N +I+ +++ID R A + E +Q
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT--KRFDAQTGADRE--VQ-- 286
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
++ L LN +DG + + ++ TN + LDPALLRPGR+D
Sbjct: 287 RILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 149 (57.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 226 EQKTKIMQDLERF-VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DV 281
E K +Q+L ++ V+ D + + G RG L YGPPG GK+ L A+AN NF V
Sbjct: 480 ESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 539
Query: 282 YDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
EL + S +++R + +A +L +++D + D G + I
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN 599
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
Q L +DG+ + I+ TN + +DPA+LRPGR+D +++
Sbjct: 600 Q-------ILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYI 642
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/179 (28%), Positives = 85/179 (47%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
++Q +I + +E ++ ++ +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 207 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 266
Query: 282 YDLEL-TEL--RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ ++L S S+LR S I+ +++ID +D+ GE E I
Sbjct: 267 NGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTH----GEVERRI- 321
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+S L +DG+ S I++ TN +DPAL R GR D + + +G
Sbjct: 322 -----VSQLLTLMDGMKKS--SHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 373
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 149 (57.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 57/179 (31%), Positives = 88/179 (49%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A +E K +IM+ + F+K Y+ +G +G LL GPPGTGK+ L A A
Sbjct: 302 FADVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEA 360
Query: 278 N---FDVYDLELTELRSN---SDLRTLL-VATANRS-ILVVEDIDCTIDLQDRLPADIAG 329
V E E+ + +R + +A N IL V++ID + R G
Sbjct: 361 GVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGR--GHFGG 418
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
+ E Q+N TL+ L +DG S+ +++ TN + LDPAL+RPGR D +++
Sbjct: 419 QSE---QEN--TLNQLLVEMDGFNSTTNV--VVLAGTNRPDVLDPALMRPGRFDRQIYI 470
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 62/264 (23%), Positives = 116/264 (43%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T+E + ++ K ++ + ++ V+ D + + G +G L YGPPG GK+ L A+AN
Sbjct: 473 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 276 -YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
NF + EL + S +++R + A +L +++D + +I
Sbjct: 533 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNI- 588
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G+G G + ++ L +DG+ S I+ TN + +DPA+LRPGR+D +++
Sbjct: 589 GDGGGAADR---VINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
Query: 389 SYCTP-SGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLI 447
S +L AN T + A++ E R +L + I
Sbjct: 644 PLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC--KLAIRESI 701
Query: 448 EFLKVKRKEDEDAKPRKIHEESTE 471
E +++R+ + P + E +
Sbjct: 702 ES-EIRRERERQTNPSAMEVEEDD 724
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 62/264 (23%), Positives = 116/264 (43%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T+E + ++ K ++ + ++ V+ D + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTEL---RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
NF + EL + S +++R + A +L +++D + +I
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNI- 590
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G+G G + ++ L +DG+ S I+ TN + +DPA+LRPGR+D +++
Sbjct: 591 GDGGGAADR---VINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 389 SYCTP-SGFKLLAANYLGXXXXXXXXXXXXXXSTTQVTPAEVAEQLMRNDDPELVLNGLI 447
S +L AN T + A++ E R +L + I
Sbjct: 646 PLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC--KLAIRESI 703
Query: 448 EFLKVKRKEDEDAKPRKIHEESTE 471
E +++R+ + P + E +
Sbjct: 704 EN-EIRRERERQTNPSAMEVEEDD 726
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 52/179 (29%), Positives = 86/179 (48%)
Query: 225 QEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
++Q +I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 210 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 282 YDLEL-TEL--RSNSDLRTLLV-ATANR-SILVVEDIDCTIDLQDRLPADIAGEGEGPIQ 336
E+ ++L S S+LR A N +I+ ++++D +++ GE E I
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH----GEVERRI- 324
Query: 337 QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
+S L +DGL I++ TN +DPAL R GR D V + +G
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
WARNING: HSPs involving 218 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 473 459 0.00095 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 468
No. of states in DFA: 616 (65 KB)
Total size of DFA: 278 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.28u 0.09s 40.37t Elapsed: 00:00:02
Total cpu time: 40.33u 0.09s 40.42t Elapsed: 00:00:02
Start: Tue May 21 05:59:26 2013 End: Tue May 21 05:59:28 2013
WARNINGS ISSUED: 2