BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012016
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 116/215 (53%), Gaps = 16/215 (7%)
Query: 195 NYNNLYCNWTDAWIPVNLDHPAT---FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKA 251
N +Y W W P HP + ++ +E K I D+ F++ +Y G
Sbjct: 183 NKTTIYTAWATEWKP--FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIP 240
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSD-LRTLLVATANRSILVV 310
++RGYLLYGPPG+GK+S + A+A L++D+ L L E D L LL ++++++
Sbjct: 241 YRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLL 300
Query: 311 EDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKE 370
ED+D ++R GE N VT SG LN +DG+ SS DERII TTNH E
Sbjct: 301 EDVDSAFQGRER-------SGEVGFHAN-VTFSGLLNALDGVTSS--DERIIFMTTNHPE 350
Query: 371 KLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLG 405
KLDPAL+RPGR+DV ++ TP + + + G
Sbjct: 351 KLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 193 TVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAW 252
TV YN + W P ++ +EQ KI+QD++ F++ +Y G +
Sbjct: 166 TVMYNAVGAEWRQFGFP---RRRRPLSSVVLEQGISEKIVQDVKGFIENPKWYSDRGIPY 222
Query: 253 KRGYLLYGPPGTGKSSLIAAMANYLNFDV-YDLELTELRSNSDLRTLLVATANRSILVVE 311
+RGYLLYGPPG GKSS I A+A L + + S+ L LL +SI+++E
Sbjct: 223 RRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLE 282
Query: 312 DIDCTI---DLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNH 368
D+D DL + P G G ++T SG LN +DG+ S+ + RI+ TTNH
Sbjct: 283 DVDAAFVSRDLNKQNPTAYQGMG-------RLTFSGLLNALDGVAST--EARIVFMTTNH 333
Query: 369 KEKLDPALLRPGRMDVHVHMSYCT 392
++LDPAL+RPGR+DV ++ +CT
Sbjct: 334 IDRLDPALIRPGRVDVKQYVGHCT 357
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 33/239 (13%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPA---TFETLAMEQEQKTKIMQ 233
+EAK + E + K L Y ++ +W HP ++ +++ + I+Q
Sbjct: 170 EEAKEMALEKEEGKTLI--YTSMGTDWR------RFGHPRRKRPISSVILDKGKSELIIQ 221
Query: 234 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT-ELRSN 292
D+++F+ D+Y G ++RGYLLYGPPGTGKSS I A+A L + L L + S+
Sbjct: 222 DVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD 281
Query: 293 SDLRTLLVATANRSILVVEDIDCTI-----DLQDRL-PADIAGEGEGPIQ---------- 336
+ L LL RSI+++EDID I DL + A+ G +Q
Sbjct: 282 TSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSV 341
Query: 337 ---QNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
+ +T SG LN +DG+ +S G RI+ TTNH EKLD L+RPGR+D+ + + C+
Sbjct: 342 SSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCS 398
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 109/177 (61%), Gaps = 12/177 (6%)
Query: 220 TLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNF 279
++ +E +I+ D++ F+ +Y G ++RGYLLYGPPG GKSS I A+A L +
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 280 DVYDLELTELRSNSD--LRTLLVATANRSILVVEDIDCTIDLQDRLPAD--IAGEGEGPI 335
+ + L++ RS SD L LL +SI+++ED+D ++ LP + +A +G G
Sbjct: 250 SICLMSLSD-RSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMG-- 306
Query: 336 QQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCT 392
++T SG LN +DG+ SS + RI+ TTN E+LDPAL+RPGR+D+ ++ +C+
Sbjct: 307 ---RLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCS 358
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 30/273 (10%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPA---TFETLAMEQEQKTKIMQ 233
+E Q+E KT+ +Y W P +P ++ ++Q +I++
Sbjct: 155 RELALQQEEGKTV---------MYTAVGSEWRP--FGYPRRRRPLNSVVLQQGLADRIVR 203
Query: 234 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDV-YDLELTELRSN 292
D++ F+ +Y G ++RGYLLYGPPG GKSS I A+A L + S+
Sbjct: 204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263
Query: 293 SDLRTLLVATANRSILVVEDIDCTI---DLQDRLPADIAGEGEGPIQQNKVTLSGFLNFI 349
L LL +S++++ED+D DL P G G ++T SG LN +
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLG-------RLTFSGLLNAL 316
Query: 350 DGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGIKEH 409
DG+ S+ + RI+ TTNH ++LDPAL+RPGR+D+ ++ YC+ + + +
Sbjct: 317 DGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAP 374
Query: 410 ILFEEIEE--LISTTQVTPAEVAEQLM-RNDDP 439
L E E L +T Q++PA+V M +DP
Sbjct: 375 SLAENFAEHVLRATNQISPAQVQGYFMLYKNDP 407
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 177 KEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPA---TFETLAMEQEQKTKIMQ 233
+E Q+E KT+ +Y W P +P ++ +EQ +I++
Sbjct: 155 RELALQQEEGKTV---------MYTAVGSEWRP--FGYPRRRRPLNSVVLEQGVTERIVR 203
Query: 234 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDV-YDLELTELRSN 292
D+ F+ +Y G ++RGYLLYGPPG GKSS I A+A L + S+
Sbjct: 204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSD 263
Query: 293 SDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ---NKVTLSGFLNFI 349
L LL +S++++ED+D L D+A E PI+ ++T SG LN +
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLA--AENPIKYQGLGRLTFSGLLNAL 316
Query: 350 DGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGIKEH 409
DG+ S+ + RI+ TTNH ++LDPAL+RPGR+D+ ++ +C+ + + +
Sbjct: 317 DGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQAT 374
Query: 410 ILFEEIEE--LISTTQVTPAEVAEQLM--RNDDPELVLN 444
L E + L +TTQ++PA+V M +ND + N
Sbjct: 375 SLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQN 413
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 26/284 (9%)
Query: 176 EKEAKSVQQESKTIKILTVNYNNLYCNWTDAWIPVNLDHPATFETLAMEQEQKTKIMQDL 235
E A ++QQE TV Y + W P +++ ++Q +I++D+
Sbjct: 153 EARALALQQEEGK----TVMYTAVGSEWRTFGYP---RRRRPLDSVVLQQGLADRIVKDI 205
Query: 236 ERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDV-YDLELTELRSNSD 294
F+ +Y G ++RGYLLYGPPG GKSS I A+A L + S+
Sbjct: 206 REFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDR 265
Query: 295 LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ---NKVTLSGFLNFIDG 351
L LL +S++++ED+D L D+A E PI+ ++T SG LN +DG
Sbjct: 266 LNHLLSVAPQQSLVLLEDVDAAF-----LSRDLA--VENPIKYQGLGRLTFSGLLNALDG 318
Query: 352 LWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGIKEHIL 411
+ S+ + RI+ TTN+ ++LDPAL+RPGR+D+ ++ YC+ + + + L
Sbjct: 319 VAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSL 376
Query: 412 FEEIEE--LISTTQVTPAEVAEQLM--RNDDPELVLNGLIEFLK 451
E E L +T++++PA+V M +ND V N IE L+
Sbjct: 377 AENFAEHVLKATSEISPAQVQGYFMLYKNDPMGAVHN--IESLR 418
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 11/175 (6%)
Query: 220 TLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNF 279
++ ++ K I+ D+ F+K +Y G ++RGYLLYGPPG+GK+S I A+A L++
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 280 DVYDLELTELRSNSD-LRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQN 338
++ L L+E D L L+ RSIL++EDID + + + GE +
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQ-------TGEQGFHSS 339
Query: 339 KVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTP 393
VT SG LN +DG+ SS +E I TTNH EKLD A++RPGR+D V + TP
Sbjct: 340 -VTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATP 391
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+ ++ + + K+K+++D++ F+ + +YR G ++RGYLLYG PG GKSSLI A+A
Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGE 244
Query: 277 LNFDVYDLELTELR-SNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPI 335
LN D+ + L+ + + LL +SIL++EDID ++
Sbjct: 245 LNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSH---RDNVDSNNNNSN 301
Query: 336 QQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPS 394
N +T SG LN +DG+ S G RI+ TTN E LD AL+R GR+D+ + +S T S
Sbjct: 302 NNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNATKS 358
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 17/227 (7%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
D P TFE +A +E ++ + ++ F+K + Y+ +G +G LL GPPGTGK+ L A
Sbjct: 245 DLPTTFEDVAGIEEAVDEVREVVD-FLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKA 303
Query: 273 MANYLNFDVYDLELTELR------SNSDLRTLLVATANRSILVVEDIDCTIDLQDRLPAD 326
+A + L ++ + +R + NR+ ++ ID D L
Sbjct: 304 IAGEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCII-----FIDELDALGKS 358
Query: 327 IAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+G G + + TL+ L +DG S+ G I+V TN E LDPALLRPGR D HV
Sbjct: 359 RSGSVVGGHDEREQTLNALLVEMDGFDSNSG--VIVVAATNRPETLDPALLRPGRFDRHV 416
Query: 387 HMSYCTPSGFKLLAANYLGIKEHILFEEIEELISTTQVTPAEVAEQL 433
+ +G + + A ++ +++ +E EL +T V L
Sbjct: 417 LVDRPDVAGREEILAVHV---KNVKLDETVELKGIASITSGFVGADL 460
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 18/178 (10%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A + K ++ Q+L +++ D + RVG RG LL GPPGTGK+ L A+A
Sbjct: 174 TFDEVAGQTNAKREV-QELVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAGE 232
Query: 277 LNFDVYDLELTEL------RSNSDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
+ Y + +E S +R L +A N SI+ ++++D + A
Sbjct: 233 AGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRG------A 286
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G G ++ + TL+ L +DG + D I++ TN + LDPAL+RPGR D HV
Sbjct: 287 GYGGGHDEREQ-TLNQILAEMDGF--AGHDAVIVLAATNRPDVLDPALMRPGRFDRHV 341
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 35/205 (17%)
Query: 269 LIAAMANYLNFDVYDLELTELRSNSDLRTLLVA-TANRSILVVEDIDCTID--------- 318
+I A++ + ++ L L ++ +++L LL A +ILV+EDIDC +
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60
Query: 319 -------------LQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT 365
L++++ AD + E + +K+TLSG LN +DG+++S G RI++ T
Sbjct: 61 ETVVEKVTDDKSTLENKILADQLKKVE---KVSKLTLSGILNSLDGIFNSEG--RIVIMT 115
Query: 366 TNHKEKLDPALLRPGRMDVHVHMSYCTPSGFKLLAANYLGIKEHILFEEIEELISTTQVT 425
TNH E LDPAL+R GR+D+ + S C + N+ G +I I + +
Sbjct: 116 TNHSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYGKNAD---SDILSKIPSDIYS 172
Query: 426 PAEVAEQLMR-NDDPELVLNGLIEF 449
PA V+ L+ ++PE N LIE
Sbjct: 173 PAHVSGLLLSYRNNPE---NSLIEL 194
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A E K +IM+ +F+K +Y R+G RG +L GPPGTGK+ L A A
Sbjct: 295 FADVAGVDEAKEEIME-FVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 278 NFDVYDLELTELR------SNSDLRTLLVATANRS---ILVVEDIDCTIDLQDRLPADIA 328
N + +E S +R L ATA ++ I+ +++ID + R
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLF-ATARKNAPCIIFIDEIDAIGKARGR------ 406
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFT-TNHKEKLDPALLRPGRMDVHV 386
G G + + TL+ L +DG SS E I+VF TN + LDPALLRPGR D +
Sbjct: 407 GGQFGSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQI 462
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A E+K + M +L F+K+ Y +G A +G LL GPPGTGK+ L A+A
Sbjct: 173 TFKDVAGNTEEKEE-MTELIDFLKQPQKYETIGAAIPKGVLLEGPPGTGKTLLAKALAGE 231
Query: 277 LNFDVYDLELTEL------RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIA 328
+ Y + +E S +RTL + +L +++ID L
Sbjct: 232 ASVPFYAVSGSEFVEMYVGVGASRVRTLFKEAKLNAPCVLFIDEIDV-------LGGKRG 284
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G G Q+ TL+ L +DG + G I++ TN + LD ALLRPGR D
Sbjct: 285 GNSSGGNQEKDQTLNQLLTEMDGFTQAKG--IIVIGATNRADMLDAALLRPGRFD 337
>sp|O34703|YJOB_BACSU Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168)
GN=yjoB PE=1 SV=1
Length = 423
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 29/161 (18%)
Query: 228 KTKIMQDLERFVKR-KDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
K +I + +++F K +Y+ +KRG LLYGPPG GK++L+ ++A ++ V ++
Sbjct: 194 KKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDAPVAYWQI 253
Query: 287 TELRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLS 343
TE S+ + + A A R ++LV+EDID +P D+ S
Sbjct: 254 TEFTSSETIEEVFQA-ARRLAPAVLVIEDIDS-------MPEDVR--------------S 291
Query: 344 GFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALL-RPGRMD 383
FLN +DG S G ++ TTN+ E++DP L+ R GR D
Sbjct: 292 FFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRAGRFD 330
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 226 EQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
EQ +I + +E+ +K + + +VG +G LLYGPPGTGK+ L A+AN+ + L
Sbjct: 186 EQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLA 245
Query: 286 LTEL------RSNSDLRTL--LVATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQ 337
EL +R L L SI+ +++ID + R D A G+ +Q+
Sbjct: 246 APELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDA---IGARRMRD-ATSGDREVQR 301
Query: 338 NKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
TL+ L +DG + D ++I TN K+ LDPALLRPGR D H+ + G
Sbjct: 302 ---TLTQLLAEMDG-FDPLDDIKVIA-ATNRKDILDPALLRPGRFDRHIKIPLPDEEG 354
>sp|C8W731|FTSH_ATOPD ATP-dependent zinc metalloprotease FtsH OS=Atopobium parvulum
(strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)
GN=ftsH PE=3 SV=1
Length = 644
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
D TF+ +A ++E K MQ++ F+K D Y+ +G RG LL GPPGTGK+ + A
Sbjct: 178 DTGITFKDVAGQEEAKES-MQEIVSFLKTPDKYKEIGARCPRGALLVGPPGTGKTLIAKA 236
Query: 273 MANYLN---FDVYDLELTEL---RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLP 324
+A F + E E+ R + +R L ++ I+ +++ID + R
Sbjct: 237 VAGEAGVPFFQIAGSEFVEMFVGRGAAKVRDLFKQANEKAPCIIFIDEIDA---VGKRRD 293
Query: 325 ADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
A + E + TL+ L+ +DG + G +++ TN E LD ALLRPGR D
Sbjct: 294 ASLNSNDE-----REQTLNQLLSEMDGFDNHKG--IVVLAATNRPETLDKALLRPGRFDR 346
Query: 385 HV 386
+
Sbjct: 347 RI 348
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
AT+E + EQ +I + +E +K + + +G A +G ++YGPPGTGK+ L A+A+
Sbjct: 153 ATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAH 212
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL + +R L V SI+ +++ID +
Sbjct: 213 HTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTE----- 267
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+G G + + L LN +DG S+ + I+ TN + LDPALLRPGR+D
Sbjct: 268 GGKGGGDSEVQRTMLE-LLNQLDGFESTQNIK--IIMATNRIDILDPALLRPGRID 320
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A +E K + +Q++ +F+K ++R+G +G LL GPPGTGK+ L A+A
Sbjct: 152 TFQDVAGIEEAKEE-LQEVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGE 210
Query: 277 LNFDVYDLELTELRSNSDLRTLLVATANRS--------------ILVVEDIDCTIDLQDR 322
N ++L S SD + V I+ +++ID +
Sbjct: 211 ANVPFFNL------SGSDFVEMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHRG- 263
Query: 323 LPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRM 382
AG G G ++ + TL+ L +DG S+ G I+V TN + LDPALLRPGR
Sbjct: 264 -----AGLGGGHDEREQ-TLNQLLVEMDGFESTEG--VIMVAATNRPDVLDPALLRPGRF 315
Query: 383 DVHV 386
D V
Sbjct: 316 DRQV 319
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A E+E K ++ Q ++ F+K Y R+G RG LL GPPGTGK+ L A+A
Sbjct: 249 TFADVAGEEEAKAELAQVVD-FLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGE 307
Query: 277 LNFDVYDLELTEL------RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIA 328
+ + +E S +R L SI+ ++++D + A
Sbjct: 308 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQR------FA 361
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G G G ++ + TL+ L +DG + + +++ TN + LDPALLRPGR D V
Sbjct: 362 GLGVGNDEREQ-TLNQLLVEMDGFEAHT--DVVVIAATNRPDVLDPALLRPGRFDRQV 416
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAA 272
ATF +A E KT++ + ++ F+K + Y ++G RG LL GPPGTGK+ L IA
Sbjct: 152 ATFRDVAGNAEAKTELSEIVD-FLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAG 210
Query: 273 MANYLNFDVYDLELTEL---RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADI 327
A+ F E E+ + +R L + ++ ++++D ++ L +
Sbjct: 211 EASVPFFSASGSEFVEMFVGVGAARVRDLFSQAREKGACLVFIDELDAVGKVRG-LGGSV 269
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVH 387
G E + TL+ L +DG + +++ TN E LDPALLRPGR D VH
Sbjct: 270 GGHDE-----REQTLNQLLTEMDGFDAHTA--MVVIGATNRAEILDPALLRPGRFDRRVH 322
Query: 388 M 388
+
Sbjct: 323 I 323
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+E + +EQ ++ + +E + R + + VG G LLYGPPGTGK+ L A+AN
Sbjct: 148 TYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGIDPPSGVLLYGPPGTGKTMLAKAVANQ 207
Query: 277 LNFDVYDLELTEL------RSNSDLRTLL-VATANR-SILVVEDIDCTIDLQDRLPADIA 328
N + +EL +R L VA N +++ +++ID + D
Sbjct: 208 TNASFIKMAGSELVHKFIGEGAKLVRDLFEVARENEPAVIFIDEIDAIASKR----TDSK 263
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G+ +Q+ T+ L +DG + G+ RII TN + LDPA+LRPGR D + +
Sbjct: 264 TSGDAEVQR---TMMQLLAEMDG-FDERGNIRIIA-ATNRFDMLDPAILRPGRFDRLIEV 318
Query: 389 SYCTPSGFKL---LAANYLGIKEHILFEEIEEL 418
G ++ + + + + + F E+ E+
Sbjct: 319 PKPNEDGREIIFQIHTRKMNVSDDVDFVELAEM 351
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 24/184 (13%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A +E K ++ Q+L F+K ++++G +G L+ GPPGTGK+ L A+A
Sbjct: 151 TFKDVAGVEEAKEEV-QELVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGE 209
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-----------ANRSILVVEDIDCTIDLQDRLPA 325
+ + + S SD + V A R + ID ID R
Sbjct: 210 ADVPFFSI------SGSDFVEMFVGVGASRVRDMFEQARRHAPCIVFID-EIDAVGRARG 262
Query: 326 DIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVH 385
G G +Q TL+ L +DG+ S G I++ TN K+ LDPALLRPGR D
Sbjct: 263 TGLGGGHDEREQ---TLNALLVEMDGIESQEG--VIVIAATNRKDVLDPALLRPGRFDRE 317
Query: 386 VHMS 389
V ++
Sbjct: 318 VRVN 321
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T++ + +Q +I + +E VK + + +G A +G +LYGPPGTGK+ L A+A+
Sbjct: 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 204
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + EL + +R L V SI+ +++ID + +
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR----VEG 260
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
+G G+ +Q+ T+ LN +DG +S + I+ TN + LDPALLRPGR+D
Sbjct: 261 SGGGDSEVQR---TMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRID 311
>sp|B1ZMG6|FTSH_OPITP ATP-dependent zinc metalloprotease FtsH OS=Opitutus terrae (strain
DSM 11246 / PB90-1) GN=ftsH PE=3 SV=1
Length = 614
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 31/188 (16%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+F ++A E K ++ + +E F++ +R+ G +G LL GPPGTGK+ L A+A
Sbjct: 172 SFSSVAGCDEAKDEVYEVVE-FLRDPARFRQTGGRMPKGVLLVGPPGTGKTMLAKAVAGE 230
Query: 277 LNFDVYDLELTELRSNSDLRTLLVAT-ANR-------------SILVVEDIDCTIDLQDR 322
+ Y L S SD L V A+R SI+ +++ID I Q
Sbjct: 231 ARANFYSL------SGSDFVELYVGVGASRVRSLFKKARETAPSIIFIDEIDA-IGRQRS 283
Query: 323 LPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPGR 381
A E G Q++ TL+ L +DG S D+ ++VF TN + +D ALLRPGR
Sbjct: 284 -----AAESGGAQQEHDQTLNALLVAMDGFDS---DDAVVVFGATNRPDTMDRALLRPGR 335
Query: 382 MDVHVHMS 389
D V +
Sbjct: 336 FDRQVSVG 343
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 17/172 (9%)
Query: 232 MQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTEL-- 289
+Q++ F+K + ++++G +G LL GPPGTGK+ L A+A + + + +E
Sbjct: 209 LQEIVDFLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGEADVPFFSVNGSEFIQ 268
Query: 290 ----RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLS 343
S +R L + SI+ +++ID + AG G G ++ + TL+
Sbjct: 269 MFVGVGASRVRDLFKTAKEQSPSIIFIDEIDAVGRQRG------AGLGGGHDEREQ-TLN 321
Query: 344 GFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTPSG 395
L +DG + I++ TN + LDPALLRPGR D HV + T G
Sbjct: 322 QILGEMDGFGGAQA--VIVIAATNRPDVLDPALLRPGRFDRHVTVGRPTMKG 371
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 218 FETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMA 274
F+ +A E K + +Q++ F+K+ + + +G RG LL GPPGTGK+ L IA A
Sbjct: 210 FDDVAGIDEAKEE-LQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEA 268
Query: 275 NYLNFDVYDLELTEL---RSNSDLRTLL-VATANRSILV-VEDIDCTIDLQDRLPADIAG 329
F + E E+ S +R L A N LV +++ID + G
Sbjct: 269 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRG------VG 322
Query: 330 EGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMS 389
G G ++ + TL+ L +DG + G I++ TN + LD ALLRPGR D V +
Sbjct: 323 YGGGNDEREQ-TLNQLLTEMDGFEGNSGI--IVIAATNRPDVLDLALLRPGRFDRQVTVD 379
Query: 390 YCTPSGFKLLAANYLGIKEHILFEEIEELISTTQVTPAEVAEQLMRNDDPELVLNGLIEF 449
Y G +L+ A + K+ L EE+ +L + + TP L VLN F
Sbjct: 380 YPDVQGRELILAIHAQNKK--LHEEV-QLAAIARRTPGFTGADLAN------VLNEAAIF 430
Query: 450 LKVKRKE 456
+RKE
Sbjct: 431 TARRRKE 437
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 23/197 (11%)
Query: 211 NLDHP-ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 269
+L +P ++E + +E K KI + +E ++ + ++R+G +G LLYGPPGTGK+ L
Sbjct: 203 SLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLL 262
Query: 270 IAAMANYLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQD 321
A+AN + + E+ S +R + SI+ +++ID ++
Sbjct: 263 ARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKRE 322
Query: 322 RLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVF-TTNHKEKLDPALLRPG 380
D+ GE E K ++ L +DG+ G R+IV TN + +DPAL RPG
Sbjct: 323 ----DVTGEVE------KRVVAQLLTLMDGI---KGRGRVIVIGATNRPDAIDPALRRPG 369
Query: 381 RMDVHVHMSYCTPSGFK 397
R D + + G K
Sbjct: 370 RFDREIEIRPPDTKGRK 386
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 228 KTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT 287
K ++ + +E ++ + + + G +G LL+GPPGTGK+ L A+A + +
Sbjct: 496 KQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGP 555
Query: 288 EL------RSNSDLRTLL--VATANRSILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNK 339
E+ S +R + A +++ ++ID ++ L D +G E + Q
Sbjct: 556 EILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRG-LSTD-SGVTERIVNQLL 613
Query: 340 VTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHMSYCTP----SG 395
+ G + ++ +I+ TN + LDPALLRPGR D + Y P +
Sbjct: 614 AEMDGIVPL---------NKVVIIAATNRPDILDPALLRPGRFD---RLIYVPPPDKTAR 661
Query: 396 FKLLAANY--LGIKEHILFEEIEE 417
F++L + + + E + E+I E
Sbjct: 662 FEILKVHTKNVPLAEDVSLEDIAE 685
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
+ P TF +A E K + ++++ ++K D YR +G +G LLYGPPGTGK+ L A
Sbjct: 146 ESPVTFADVAGMDEVKGE-LEEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARA 204
Query: 273 MANYLNFDVYDL------ELTELRSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLP 324
+A + L EL S +R L + I+ +++ID + Q
Sbjct: 205 VAGEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEIDA-VGRQRGSA 263
Query: 325 ADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
A + G E + TL+ L +DG + G I++ TN + LD ALLRPGR D
Sbjct: 264 AVVGGHDE-----REQTLNQLLTEMDGFGAYEG--VIVMAATNRPDVLDKALLRPGRFDR 316
Query: 385 HVHMSYCTPSG 395
+ + +G
Sbjct: 317 QIPVGPPDAAG 327
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 18/176 (10%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK +++ +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 141 STYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 200
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + + +EL +R L V SI+ +++ID + RL
Sbjct: 201 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID---SIGSRLEGGS 257
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ T+ LN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 258 GGDSE--VQR---TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 306
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 232 MQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTEL-- 289
+Q++ F+K + YRR+G +G LL GPPGTGK+ L A A + L +E
Sbjct: 218 LQEIVEFLKTPEKYRRLGGRIPKGVLLVGPPGTGKTLLARATAGEAGVPFFSLSGSEFVE 277
Query: 290 ----RSNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLPADIAGEGEGPIQQNKVTLS 343
+ +R L ++ I+ ++++D L A I G + + + TL+
Sbjct: 278 MFVGVGAARVRDLFAQATQKAPCIVFIDELDA---LGKSRNAGIMGGHD----EREQTLN 330
Query: 344 GFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
L +DG + G II+ TN E LDPALLRPGR D V
Sbjct: 331 QLLAEMDGFDARAG--LIIMGATNRPEILDPALLRPGRFDRQV 371
>sp|P39925|AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AFG3 PE=1 SV=1
Length = 761
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+F+ +A E K +IM+ F+K Y ++G RG +L GPPGTGK+ L A A
Sbjct: 286 SFKNVAGCDEAKQEIME-FVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 277 LN---FDVYDLELTEL---RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADIA 328
N V E E+ S +R L + SI+ +++ID + +
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGK-----G 399
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
G G + + TL+ L +DG +S D+ +++ TN + LD AL+RPGR D H+ +
Sbjct: 400 GALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQI 457
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 145 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 204
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL + +R L V SI+ +++ID R+ +
Sbjct: 205 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS--SRIESGS 262
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ T+ LN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 263 GGDSE--VQR---TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 311
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
++E + +EQ ++ + +E +K+ + + ++G +G LLYGPPGTGK+ L A+A+
Sbjct: 149 SYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHE 208
Query: 277 LNFDVYDLELTEL------RSNSDLRTL--LVATANRSILVVEDIDCTIDLQDRLPADIA 328
N + +E +R + L + SI+ +++ID RL + +
Sbjct: 209 TNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVA--AKRLKSSTS 266
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWS--SCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
G+ E +Q+ TL L +DG S + G IV TN + LDPALLRPGR D +
Sbjct: 267 GDRE--VQR---TLMQLLAELDGFESRGNVG----IVAATNRPDILDPALLRPGRFDRFI 317
Query: 387 HMSYCTPSG 395
+ G
Sbjct: 318 EVPLPNEDG 326
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI--GTKRYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ T+ LN +DG + S GD ++I TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQR---TMLELLNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRID 348
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI--GTKRYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ T+ LN +DG + S GD ++I TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQR---TMLELLNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRID 348
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI--GTKRYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ T+ LN +DG + S GD ++I TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQR---TMLELLNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRID 348
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 213 DHPATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 272
D +F+ +A E KT+ +++ F+K D Y VG +G LL GPPGTGK+ L A
Sbjct: 180 DTGVSFKDIAGIDEAKTE-FEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKA 238
Query: 273 MANYLN---FDVYDLELTELR---SNSDLRTLLVATANRS--ILVVEDIDCTIDLQDRLP 324
+AN + F V E E+ + +R L + + I+ +++ID +
Sbjct: 239 IANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERG--- 295
Query: 325 ADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDV 384
AG G G ++ + TL+ L +DG + G I+V TN + LD ALLRPGR D
Sbjct: 296 ---AGVGGGNDEREQ-TLNQLLTEMDGFKENKG--VIVVGATNRADILDAALLRPGRFDR 349
Query: 385 HVHMS 389
V ++
Sbjct: 350 QVTVN 354
>sp|Q980M1|PAN_SULSO Proteasome-activating nucleotidase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pan
PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHVHM 388
GE IQ+ + L L+ D L D I+ TN + LDPALLRPGR D + +
Sbjct: 248 TSGEREIQRTLMQLLAELDGFDPL-----DNVKIIAATNRIDILDPALLRPGRFDRIIEV 302
Query: 389 SYCTPSGFKLLAANYL---GIKEHI---LFEEIEELISTTQV--TPAEVAEQLMRNDDPE 440
G + YL I+++I L ++ E S + E A +R+ +
Sbjct: 303 PLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNK 362
Query: 441 LVLNGLIEF---LKVKRKEDEDAKPRK 464
+ +N L+E + VKR + E K R+
Sbjct: 363 VTMNDLVEAINKINVKRNKMESMKERR 389
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 22/191 (11%)
Query: 205 DAWIPV--NLDHPA-TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGP 261
D+ IPV + P+ T+ + QK +I + +E + + D YR++G +G LLYGP
Sbjct: 117 DSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGP 176
Query: 262 PGTGKSSLIAAMANYLNFDVYDLELTEL---------RSNSDLRTLLVATANRSILVVED 312
PGTGK+ L+ A+AN+ + +E R D+ L A SI+ +++
Sbjct: 177 PGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAP-SIVFIDE 235
Query: 313 IDCTIDLQDRLPADIAGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKL 372
+D R A + + E +Q+ + L LN +DG + + ++ TN + +
Sbjct: 236 VDSIA--TKRFDASTSADRE--VQRVLIEL---LNQMDGFDPAANVK--VIMATNRADTI 286
Query: 373 DPALLRPGRMD 383
DPALLRPGR+D
Sbjct: 287 DPALLRPGRLD 297
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID R ++
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAI--GTKRYDSNSG 300
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ T+ LN +DG + S GD ++I+ TN E LDPAL+RPGR+D
Sbjct: 301 GERE--IQR---TMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>sp|C3NFW6|PAN_SULIN Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|C3N7K8|PAN_SULIY Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|C3MY47|PAN_SULIM Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|C3MRF1|PAN_SULIL Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|C4KIR6|PAN_SULIK Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|C3MZI6|PAN_SULIA Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
M.16.27) GN=pan PE=3 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 274
T+ + +EQ ++ + +E +K+ + +R +G +G LLYGPPGTGK+ L A+A
Sbjct: 132 TYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATE 191
Query: 275 -NYLNFDVYDLELTELRSNSDLRTL--LVATANR---SILVVEDIDCTIDLQDRLPADIA 328
N + V E + R + L A R SI+ +++ID R+ DI
Sbjct: 192 SNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI--GAKRI--DIG 247
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE IQ+ TL L +DG + D I+ TN + LDPALLRPGR D
Sbjct: 248 TSGEREIQR---TLMQLLAELDGF--NPLDNVKIIAATNRIDILDPALLRPGRFD 297
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 216 ATFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
+T+E + +Q +I + +E VK + + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 142 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 201
Query: 276 YLNFDVYDLELTEL------RSNSDLRTLLVATANR--SILVVEDIDCTIDLQDRLPADI 327
+ + +EL + +R L V SI+ +++ID R+ +
Sbjct: 202 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSI--GSSRIESGS 259
Query: 328 AGEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
G+ E +Q+ T+ LN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 260 GGDSE--VQR---TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 308
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 238 FVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTELRSNSDLRT 297
F++ + Y+++G +G LL GPPGTGK+ L A+A + L S SD
Sbjct: 240 FLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSL------SGSDFVE 293
Query: 298 LLVATANRSILVVEDI--------DCTIDLQDRLPADIAGEGEGPI---QQNKVTLSGFL 346
+ V V D+ C I + D L A G G + + + TL+ L
Sbjct: 294 MFVGVGAAR---VRDMFQQAEAKAPCIIFI-DELDALGKSRGAGIMGGHDEREQTLNALL 349
Query: 347 NFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHV 386
+DG S+ G I++ TN E LDPALLRPGR D HV
Sbjct: 350 VEMDGFGSNSG--VIVMAATNRPETLDPALLRPGRFDRHV 387
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 217 TFETLAMEQEQKTKIMQDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + Q +I + +E + +YY +G +G +LYGPPGTGK+ L A+AN
Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 277 LN---FDVYDLELTE--LRSNSDLRTLLVATANR---SILVVEDIDCTIDLQDRLPADIA 328
+ V EL + L L L A SI+ +++ID R ++
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAV--GTKRYDSNSG 299
Query: 329 GEGEGPIQQNKVTLSGFLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMD 383
GE E IQ+ T+ LN +DG + S GD ++I TN E LDPAL+RPGR+D
Sbjct: 300 GERE--IQR---TMLELLNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRID 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,188,863
Number of Sequences: 539616
Number of extensions: 6997395
Number of successful extensions: 30013
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 362
Number of HSP's that attempted gapping in prelim test: 28120
Number of HSP's gapped (non-prelim): 1704
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)