Query 012017
Match_columns 473
No_of_seqs 110 out of 203
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 07:44:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012017.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012017hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06963 FPN1: Ferroportin1 (F 100.0 4E-127 9E-132 1005.8 34.2 417 7-444 13-432 (432)
2 KOG2601 Iron transporter [Inor 100.0 9E-110 2E-114 839.0 14.9 450 7-469 38-487 (503)
3 PF05977 MFS_3: Transmembrane 99.6 2.1E-12 4.6E-17 140.2 29.2 352 6-438 20-375 (524)
4 TIGR00900 2A0121 H+ Antiporter 99.3 6.8E-10 1.5E-14 110.5 26.0 341 8-421 11-354 (365)
5 PRK11195 lysophospholipid tran 99.3 4.6E-09 9.9E-14 109.2 32.2 337 7-427 14-353 (393)
6 PRK06814 acylglycerophosphoeth 99.3 7.5E-10 1.6E-14 129.5 27.8 340 13-423 27-389 (1140)
7 PRK10489 enterobactin exporter 99.3 1.5E-09 3.4E-14 112.6 26.1 342 8-429 29-374 (417)
8 TIGR00893 2A0114 d-galactonate 99.1 3.6E-08 7.7E-13 98.3 27.0 379 15-451 12-395 (399)
9 PF07690 MFS_1: Major Facilita 99.1 3.2E-09 7E-14 105.3 18.5 334 15-419 14-350 (352)
10 PRK08633 2-acyl-glycerophospho 99.1 6.8E-08 1.5E-12 112.6 30.9 342 13-427 25-381 (1146)
11 PRK11102 bicyclomycin/multidru 99.1 4.7E-07 1E-11 91.9 32.5 365 15-460 9-376 (377)
12 PRK12307 putative sialic acid 99.1 1.8E-07 3.8E-12 96.9 29.5 153 266-424 220-377 (426)
13 TIGR00901 2A0125 AmpG-related 99.1 4.2E-08 9.1E-13 99.3 23.5 147 266-415 198-356 (356)
14 PRK09874 drug efflux system pr 99.0 1.2E-06 2.7E-11 89.6 32.4 339 37-461 58-403 (408)
15 PRK11128 putative 3-phenylprop 99.0 5.7E-07 1.2E-11 92.6 29.8 179 265-455 196-378 (382)
16 PRK05122 major facilitator sup 99.0 7.9E-07 1.7E-11 91.4 30.0 362 15-463 33-396 (399)
17 PRK11902 ampG muropeptide tran 99.0 2.5E-06 5.5E-11 88.4 32.3 265 141-465 126-396 (402)
18 PRK11551 putative 3-hydroxyphe 98.9 1.2E-06 2.5E-11 90.2 28.3 149 295-451 242-392 (406)
19 PRK11646 multidrug resistance 98.9 1.9E-06 4.1E-11 89.9 29.9 320 23-429 36-359 (400)
20 TIGR00881 2A0104 phosphoglycer 98.9 2.1E-07 4.6E-12 92.9 21.9 344 14-420 12-362 (379)
21 PRK11043 putative transporter; 98.9 7.3E-06 1.6E-10 84.5 33.9 302 36-425 44-352 (401)
22 cd06174 MFS The Major Facilita 98.9 1.8E-06 3.9E-11 84.9 26.7 320 15-441 17-338 (352)
23 PRK10091 MFS transport protein 98.8 4.4E-06 9.5E-11 86.0 29.3 336 36-459 41-380 (382)
24 PRK03545 putative arabinose tr 98.8 6E-06 1.3E-10 85.0 29.9 298 44-436 55-359 (390)
25 PRK11652 emrD multidrug resist 98.8 1.1E-05 2.5E-10 82.8 30.9 306 41-429 51-359 (394)
26 PRK15402 multidrug efflux syst 98.8 1.3E-05 2.8E-10 82.9 31.0 314 41-432 56-373 (406)
27 TIGR00902 2A0127 phenyl propri 98.8 1E-05 2.2E-10 83.4 29.8 174 267-452 198-375 (382)
28 PRK12382 putative transporter; 98.8 1.2E-05 2.6E-10 82.6 28.9 122 296-427 239-362 (392)
29 PRK11273 glpT sn-glycerol-3-ph 98.7 1.6E-05 3.5E-10 84.0 30.5 152 271-428 250-409 (452)
30 TIGR00710 efflux_Bcr_CflA drug 98.7 4.2E-05 9.1E-10 77.3 32.0 307 40-424 47-356 (385)
31 PRK09705 cynX putative cyanate 98.7 1.3E-05 2.8E-10 83.2 28.8 128 294-428 226-354 (393)
32 TIGR00890 2A0111 Oxalate/Forma 98.7 1.3E-05 2.9E-10 79.8 27.6 122 294-423 226-350 (377)
33 TIGR00895 2A0115 benzoate tran 98.7 2.4E-06 5.1E-11 86.1 22.3 115 298-420 275-390 (398)
34 TIGR00883 2A0106 metabolite-pr 98.7 4E-05 8.6E-10 76.9 30.5 133 292-427 238-373 (394)
35 TIGR00891 2A0112 putative sial 98.7 1.9E-05 4.1E-10 80.1 28.3 129 291-427 256-388 (405)
36 TIGR02718 sider_RhtX_FptX side 98.7 0.00011 2.3E-09 75.7 33.1 153 267-423 201-359 (390)
37 TIGR00879 SP MFS transporter, 98.7 1.5E-05 3.3E-10 81.8 26.0 125 296-422 307-437 (481)
38 PRK15403 multidrug efflux syst 98.6 5.9E-05 1.3E-09 79.1 30.2 292 46-417 64-360 (413)
39 PRK11663 regulatory protein Uh 98.6 9.2E-05 2E-09 77.9 30.5 379 18-462 44-430 (434)
40 TIGR00899 2A0120 sugar efflux 98.6 0.00013 2.8E-09 73.6 30.1 122 296-427 222-347 (375)
41 PRK03893 putative sialic acid 98.5 0.00012 2.7E-09 77.4 30.0 126 294-427 296-426 (496)
42 PRK15011 sugar efflux transpor 98.5 0.0002 4.4E-09 74.1 30.7 123 295-427 238-364 (393)
43 PRK14995 methyl viologen resis 98.5 6.2E-05 1.3E-09 80.8 27.5 337 35-417 47-400 (495)
44 PRK10213 nepI ribonucleoside t 98.5 0.00021 4.6E-09 74.3 30.7 297 41-427 63-364 (394)
45 TIGR00711 efflux_EmrB drug res 98.5 5.7E-05 1.2E-09 79.4 26.1 356 17-419 22-399 (485)
46 TIGR00897 2A0118 polyol permea 98.5 0.00011 2.4E-09 76.2 27.9 151 267-427 215-374 (402)
47 PRK10473 multidrug efflux syst 98.5 0.00034 7.5E-09 71.8 30.1 228 43-346 48-277 (392)
48 TIGR00712 glpT glycerol-3-phos 98.5 0.00019 4.1E-09 75.5 28.4 181 270-459 247-436 (438)
49 TIGR00892 2A0113 monocarboxyla 98.4 0.00017 3.8E-09 76.6 28.0 148 269-424 236-389 (455)
50 PRK10406 alpha-ketoglutarate t 98.4 0.001 2.2E-08 69.9 32.8 117 295-415 265-383 (432)
51 TIGR00889 2A0110 nucleoside tr 98.4 0.00016 3.5E-09 76.1 26.8 159 268-429 202-371 (418)
52 PRK10054 putative transporter; 98.4 0.00037 8.1E-09 72.6 29.2 347 20-454 30-381 (395)
53 PRK09528 lacY galactoside perm 98.4 0.00026 5.6E-09 73.8 27.5 118 302-427 256-376 (420)
54 TIGR00792 gph sugar (Glycoside 98.4 0.00018 3.9E-09 74.7 26.1 148 266-420 214-370 (437)
55 PRK11010 ampG muropeptide tran 98.4 0.00083 1.8E-08 72.4 30.8 159 266-437 214-383 (491)
56 TIGR00886 2A0108 nitrite extru 98.3 0.00017 3.8E-09 72.6 23.3 77 270-346 221-299 (366)
57 PRK10504 putative transporter; 98.3 0.00083 1.8E-08 70.9 29.4 142 270-419 257-404 (471)
58 TIGR00894 2A0114euk Na(+)-depe 98.3 0.00012 2.6E-09 77.4 21.7 350 43-456 86-451 (465)
59 PRK15075 citrate-proton sympor 98.2 0.0039 8.4E-08 65.5 30.8 128 295-428 260-393 (434)
60 PRK03699 putative transporter; 98.1 0.0055 1.2E-07 63.4 30.5 55 291-345 223-278 (394)
61 TIGR00788 fbt folate/biopterin 98.1 0.00024 5.2E-09 76.2 20.6 152 270-423 248-406 (468)
62 PRK03633 putative MFS family t 98.1 0.006 1.3E-07 62.7 29.5 112 296-417 223-334 (381)
63 PRK09556 uhpT sugar phosphate 98.1 0.0031 6.7E-08 67.0 28.2 152 271-428 255-411 (467)
64 TIGR00896 CynX cyanate transpo 98.1 0.0033 7.1E-08 63.7 26.7 118 292-417 216-335 (355)
65 PRK10429 melibiose:sodium symp 98.1 0.0028 6E-08 67.8 27.2 149 267-417 224-380 (473)
66 TIGR02332 HpaX 4-hydroxyphenyl 98.1 0.0019 4.1E-08 67.7 25.3 135 292-434 261-400 (412)
67 TIGR00882 2A0105 oligosacchari 98.0 0.012 2.6E-07 60.7 29.8 128 292-428 234-369 (396)
68 COG2814 AraJ Arabinose efflux 98.0 0.011 2.4E-07 62.6 29.7 239 138-453 134-384 (394)
69 TIGR00903 2A0129 major facilit 98.0 0.0038 8.3E-08 64.9 26.1 225 141-427 110-340 (368)
70 PRK10077 xylE D-xylose transpo 98.0 0.0076 1.7E-07 63.4 28.1 117 300-420 298-416 (479)
71 TIGR00898 2A0119 cation transp 98.0 0.0042 9.2E-08 66.1 26.2 115 302-424 352-466 (505)
72 PRK09848 glucuronide transport 97.9 0.0084 1.8E-07 63.2 27.3 149 266-419 220-377 (448)
73 PRK09669 putative symporter Ya 97.9 0.017 3.7E-07 60.9 29.5 146 267-417 222-375 (444)
74 PRK10642 proline/glycine betai 97.9 0.049 1.1E-06 58.4 32.7 130 294-427 271-402 (490)
75 PF13347 MFS_2: MFS/sugar tran 97.9 0.0019 4.1E-08 67.8 21.2 87 264-351 215-303 (428)
76 PRK09952 shikimate transporter 97.9 0.029 6.3E-07 59.3 29.8 154 295-451 272-429 (438)
77 PLN00028 nitrate transmembrane 97.7 0.037 7.9E-07 59.4 27.9 60 278-337 257-317 (476)
78 PF11700 ATG22: Vacuole efflux 97.7 0.12 2.5E-06 56.2 31.8 160 295-460 303-472 (477)
79 TIGR01299 synapt_SV2 synaptic 97.4 0.074 1.6E-06 60.8 27.3 107 310-424 597-704 (742)
80 KOG2615 Permease of the major 97.3 0.0072 1.6E-07 63.7 15.6 116 31-170 66-181 (451)
81 cd06174 MFS The Major Facilita 97.3 0.0095 2.1E-07 58.4 16.0 140 290-436 16-155 (352)
82 PF07690 MFS_1: Major Facilita 97.2 0.0049 1.1E-07 61.0 12.6 145 299-450 22-167 (352)
83 TIGR00887 2A0109 phosphate:H+ 97.2 0.49 1.1E-05 50.8 29.1 124 296-422 311-446 (502)
84 TIGR00900 2A0121 H+ Antiporter 97.1 0.01 2.2E-07 58.9 14.3 143 296-440 22-164 (365)
85 TIGR00881 2A0104 phosphoglycer 97.0 0.0045 9.7E-08 61.7 10.7 148 282-436 4-152 (379)
86 TIGR00893 2A0114 d-galactonate 97.0 0.0047 1E-07 61.5 10.7 135 299-440 20-154 (399)
87 PRK11462 putative transporter; 97.0 0.53 1.2E-05 50.4 26.8 35 308-342 263-297 (460)
88 PRK11902 ampG muropeptide tran 97.0 0.023 5E-07 58.9 15.7 153 282-441 4-166 (402)
89 PRK11551 putative 3-hydroxyphe 96.8 0.025 5.5E-07 58.1 14.5 138 292-437 34-172 (406)
90 TIGR00895 2A0115 benzoate tran 96.8 0.016 3.4E-07 58.4 12.3 122 296-424 40-161 (398)
91 TIGR00710 efflux_Bcr_CflA drug 96.8 0.024 5.2E-07 57.2 13.6 123 295-424 27-149 (385)
92 PRK10489 enterobactin exporter 96.8 0.011 2.3E-07 61.6 11.2 157 266-424 9-166 (417)
93 TIGR00885 fucP L-fucose:H+ sym 96.7 1 2.2E-05 47.4 27.5 149 271-428 229-380 (410)
94 PRK11663 regulatory protein Uh 96.7 0.036 7.7E-07 58.4 14.5 150 277-438 27-179 (434)
95 PRK11102 bicyclomycin/multidru 96.6 0.025 5.4E-07 57.4 12.4 124 294-424 12-135 (377)
96 TIGR00712 glpT glycerol-3-phos 96.6 0.023 5.1E-07 59.7 12.6 122 296-420 49-170 (438)
97 PRK11646 multidrug resistance 96.5 0.049 1.1E-06 56.8 14.0 125 296-427 33-158 (400)
98 PF03825 Nuc_H_symport: Nucleo 96.4 0.17 3.7E-06 53.6 17.5 190 270-461 203-399 (400)
99 TIGR00901 2A0125 AmpG-related 96.4 0.11 2.4E-06 52.5 15.2 128 294-427 9-142 (356)
100 TIGR00897 2A0118 polyol permea 96.3 0.13 2.7E-06 53.5 15.9 119 296-417 36-154 (402)
101 TIGR00891 2A0112 putative sial 96.3 0.12 2.5E-06 52.4 15.0 126 292-424 31-156 (405)
102 PRK12382 putative transporter; 96.1 0.26 5.6E-06 50.6 16.7 130 295-424 37-168 (392)
103 COG2270 Permeases of the major 96.1 1.9 4.2E-05 46.3 23.3 112 296-415 275-388 (438)
104 COG2211 MelB Na+/melibiose sym 96.1 1.7 3.7E-05 47.3 23.2 290 6-362 18-323 (467)
105 COG2271 UhpC Sugar phosphate p 96.0 0.55 1.2E-05 50.4 18.7 179 271-456 249-436 (448)
106 PRK05122 major facilitator sup 96.0 0.16 3.4E-06 52.3 14.4 139 296-437 38-179 (399)
107 PRK10133 L-fucose transporter; 96.0 2.7 5.9E-05 44.6 33.7 79 268-346 252-333 (438)
108 TIGR00880 2_A_01_02 Multidrug 96.0 0.1 2.2E-06 43.9 10.8 111 318-435 8-118 (141)
109 TIGR01299 synapt_SV2 synaptic 96.0 0.37 8.1E-06 55.2 18.4 121 295-422 189-309 (742)
110 PRK10054 putative transporter; 95.9 0.2 4.4E-06 52.1 15.1 125 295-426 29-154 (395)
111 PRK03699 putative transporter; 95.9 0.31 6.6E-06 50.4 16.1 151 280-440 14-166 (394)
112 PRK09874 drug efflux system pr 95.9 0.27 5.9E-06 50.3 15.4 122 294-424 35-162 (408)
113 PRK10504 putative transporter; 95.8 0.15 3.2E-06 53.9 13.7 141 276-424 13-154 (471)
114 TIGR02332 HpaX 4-hydroxyphenyl 95.7 0.21 4.6E-06 52.3 13.9 142 275-424 10-152 (412)
115 PRK11010 ampG muropeptide tran 95.6 0.37 7.9E-06 52.1 15.7 146 293-445 32-183 (491)
116 TIGR00711 efflux_EmrB drug res 95.5 0.16 3.4E-06 53.4 12.5 122 299-427 28-149 (485)
117 PRK03893 putative sialic acid 95.4 0.4 8.6E-06 50.8 15.2 129 300-437 47-175 (496)
118 PRK15462 dipeptide/tripeptide 95.2 0.6 1.3E-05 51.1 15.9 154 290-451 26-185 (493)
119 PRK12307 putative sialic acid 95.2 0.71 1.5E-05 47.8 15.9 123 291-421 31-159 (426)
120 TIGR00886 2A0108 nitrite extru 95.2 0.63 1.4E-05 46.7 15.0 134 281-423 9-145 (366)
121 TIGR00924 yjdL_sub1_fam amino 95.1 5.8 0.00013 42.7 30.6 85 366-450 379-464 (475)
122 PRK10091 MFS transport protein 95.1 0.43 9.3E-06 49.1 13.7 136 284-427 14-150 (382)
123 PRK03633 putative MFS family t 95.1 1.1 2.3E-05 46.1 16.6 147 273-427 6-153 (381)
124 PLN00028 nitrate transmembrane 95.0 0.93 2E-05 48.6 16.5 119 292-419 55-174 (476)
125 KOG2816 Predicted transporter 95.0 1.9 4.1E-05 46.8 18.8 166 279-452 246-421 (463)
126 PRK10473 multidrug efflux syst 94.9 0.54 1.2E-05 48.2 13.9 122 300-428 30-151 (392)
127 PF03209 PUCC: PUCC protein; 94.9 6.5 0.00014 42.0 24.6 304 48-416 29-349 (403)
128 TIGR00879 SP MFS transporter, 94.8 0.82 1.8E-05 46.9 14.9 131 305-439 68-201 (481)
129 TIGR00805 oat sodium-independe 94.7 0.39 8.5E-06 53.9 13.2 92 265-356 321-417 (633)
130 PRK10213 nepI ribonucleoside t 94.7 0.87 1.9E-05 47.4 15.0 133 295-437 42-175 (394)
131 PRK15402 multidrug efflux syst 94.6 1.2 2.7E-05 45.8 15.7 120 296-423 36-156 (406)
132 TIGR00890 2A0111 Oxalate/Forma 94.5 1.2 2.6E-05 44.2 14.8 130 280-419 10-141 (377)
133 PRK11273 glpT sn-glycerol-3-ph 94.4 0.58 1.2E-05 49.5 13.0 119 296-417 51-169 (452)
134 PRK10077 xylE D-xylose transpo 94.3 1.8 3.8E-05 45.6 16.3 123 303-425 50-177 (479)
135 PRK09528 lacY galactoside perm 94.3 0.78 1.7E-05 47.8 13.5 76 269-344 5-82 (420)
136 TIGR01272 gluP glucose/galacto 94.3 1.9 4.2E-05 43.7 15.9 79 271-349 137-219 (310)
137 TIGR00924 yjdL_sub1_fam amino 94.2 1.2 2.5E-05 48.0 15.0 151 294-451 31-188 (475)
138 PRK11652 emrD multidrug resist 94.1 1.6 3.4E-05 44.8 15.2 137 296-442 31-168 (394)
139 PRK09556 uhpT sugar phosphate 94.0 0.55 1.2E-05 49.9 11.8 153 267-423 23-177 (467)
140 TIGR00887 2A0109 phosphate:H+ 94.0 1.2 2.7E-05 47.8 14.6 119 304-425 52-172 (502)
141 TIGR00896 CynX cyanate transpo 93.8 2.3 5E-05 42.9 15.5 122 292-423 19-141 (355)
142 PF03092 BT1: BT1 family; Int 93.5 13 0.00027 39.8 22.4 174 268-455 209-412 (433)
143 PRK11043 putative transporter; 93.4 1.9 4.1E-05 44.4 14.3 116 299-422 32-148 (401)
144 PRK08633 2-acyl-glycerophospho 93.3 1.4 3E-05 52.0 14.7 115 308-426 47-161 (1146)
145 TIGR00880 2_A_01_02 Multidrug 92.9 2.7 5.9E-05 35.0 12.2 125 43-191 8-133 (141)
146 TIGR00885 fucP L-fucose:H+ sym 92.2 3.5 7.6E-05 43.4 14.5 128 292-423 21-149 (410)
147 PF12832 MFS_1_like: MFS_1 lik 92.1 0.62 1.3E-05 38.0 6.8 59 285-343 11-70 (77)
148 TIGR00903 2A0129 major facilit 91.9 3.4 7.3E-05 42.9 13.8 138 292-441 10-149 (368)
149 PRK09705 cynX putative cyanate 91.8 9.2 0.0002 39.6 16.9 121 292-421 28-149 (393)
150 PRK03545 putative arabinose tr 91.8 3.4 7.4E-05 42.4 13.6 131 298-437 34-164 (390)
151 TIGR00899 2A0120 sugar efflux 91.7 3.4 7.4E-05 41.4 13.3 46 295-340 19-65 (375)
152 KOG2533 Permease of the major 91.2 3.4 7.4E-05 45.3 13.5 72 265-336 264-337 (495)
153 PTZ00207 hypothetical protein; 90.8 4.3 9.3E-05 45.5 14.0 119 295-418 48-169 (591)
154 PRK09952 shikimate transporter 90.7 7.4 0.00016 41.0 15.2 98 320-420 76-177 (438)
155 PRK11195 lysophospholipid tran 90.3 5.6 0.00012 41.4 13.6 119 298-426 28-146 (393)
156 TIGR00898 2A0119 cation transp 90.0 5.1 0.00011 42.6 13.3 128 303-440 119-249 (505)
157 TIGR00894 2A0114euk Na(+)-depe 89.9 2.8 6.1E-05 44.2 11.2 116 302-425 70-188 (465)
158 PRK15011 sugar efflux transpor 89.8 7.8 0.00017 40.0 14.2 146 275-437 24-174 (393)
159 TIGR02718 sider_RhtX_FptX side 89.1 7.6 0.00016 39.9 13.4 130 280-412 4-141 (390)
160 PF01306 LacY_symp: LacY proto 88.9 21 0.00046 38.3 16.8 163 292-465 239-410 (412)
161 PRK10406 alpha-ketoglutarate t 88.8 14 0.0003 38.8 15.3 129 311-442 66-204 (432)
162 TIGR00882 2A0105 oligosacchari 88.4 11 0.00023 38.8 14.0 64 282-345 11-75 (396)
163 TIGR00883 2A0106 metabolite-pr 88.3 12 0.00027 37.2 14.0 126 296-424 15-152 (394)
164 PRK10133 L-fucose transporter; 87.8 9.2 0.0002 40.6 13.4 126 294-423 47-172 (438)
165 PRK14995 methyl viologen resis 87.2 14 0.00029 39.8 14.4 148 299-454 32-181 (495)
166 PRK11128 putative 3-phenylprop 86.8 23 0.00049 36.3 15.3 66 273-338 4-69 (382)
167 PRK15034 nitrate/nitrite trans 86.7 23 0.0005 38.6 15.7 130 280-418 41-177 (462)
168 PRK09584 tppB putative tripept 86.0 31 0.00068 37.4 16.5 126 293-424 41-170 (500)
169 KOG0569 Permease of the major 85.7 61 0.0013 35.6 24.9 193 265-463 256-462 (485)
170 COG2807 CynX Cyanate permease 85.7 16 0.00035 38.8 13.3 141 283-433 221-363 (395)
171 TIGR00892 2A0113 monocarboxyla 85.2 16 0.00035 38.8 13.6 125 286-420 32-159 (455)
172 KOG3764 Vesicular amine transp 83.5 28 0.0006 37.7 14.0 316 41-439 114-438 (464)
173 PRK15075 citrate-proton sympor 83.5 38 0.00082 35.5 15.3 117 303-424 45-173 (434)
174 PRK10207 dipeptide/tripeptide 82.1 40 0.00086 36.6 15.2 122 295-422 36-161 (489)
175 TIGR01301 GPH_sucrose GPH fami 82.1 16 0.00034 39.9 12.0 160 296-459 27-221 (477)
176 PRK09584 tppB putative tripept 81.9 82 0.0018 34.2 26.9 35 155-189 160-194 (500)
177 TIGR00902 2A0127 phenyl propri 80.9 38 0.00083 34.7 14.0 59 279-337 10-68 (382)
178 TIGR00889 2A0110 nucleoside tr 80.7 32 0.0007 36.1 13.6 36 36-71 254-289 (418)
179 PRK06814 acylglycerophosphoeth 80.4 47 0.001 39.6 16.2 125 308-439 52-177 (1140)
180 PRK15403 multidrug efflux syst 79.7 26 0.00056 36.7 12.4 125 302-436 45-170 (413)
181 PRK10207 dipeptide/tripeptide 76.8 1.2E+02 0.0025 33.0 29.0 83 372-454 383-476 (489)
182 PF06609 TRI12: Fungal trichot 76.8 1.4E+02 0.003 33.8 21.5 144 265-415 301-452 (599)
183 PF06609 TRI12: Fungal trichot 76.0 44 0.00095 37.7 13.4 172 268-454 34-216 (599)
184 KOG0254 Predicted transporter 75.4 1.3E+02 0.0027 32.6 24.1 146 271-420 292-447 (513)
185 KOG1330 Sugar transporter/spin 75.2 19 0.00042 39.3 9.9 47 36-82 71-117 (493)
186 COG0738 FucP Fucose permease [ 74.7 1.3E+02 0.0028 32.5 31.0 251 24-340 39-304 (422)
187 PF03825 Nuc_H_symport: Nucleo 74.3 11 0.00024 39.9 7.9 49 292-340 21-69 (400)
188 TIGR00806 rfc RFC reduced fola 72.0 52 0.0011 36.4 12.3 156 297-463 49-210 (511)
189 PF01306 LacY_symp: LacY proto 71.3 10 0.00022 40.7 6.7 54 294-347 28-82 (412)
190 COG3263 NhaP-type Na+/H+ and K 68.5 58 0.0013 35.6 11.4 103 313-435 193-296 (574)
191 TIGR00792 gph sugar (Glycoside 67.8 19 0.0004 37.3 7.7 125 296-421 22-153 (437)
192 KOG0255 Synaptic vesicle trans 67.4 1.8E+02 0.004 31.2 26.9 141 280-427 320-465 (521)
193 PF13955 Fst_toxin: Toxin Fst, 63.4 8 0.00017 24.1 2.3 18 157-174 2-19 (21)
194 KOG2532 Permease of the major 63.1 1.6E+02 0.0035 32.0 14.0 141 304-456 69-214 (466)
195 PRK10642 proline/glycine betai 60.6 2.4E+02 0.0051 30.2 16.3 97 317-416 66-166 (490)
196 TIGR00805 oat sodium-independe 60.2 33 0.00071 38.7 8.3 136 291-426 50-230 (633)
197 KOG0569 Permease of the major 55.1 3.3E+02 0.0071 30.1 16.6 115 297-421 43-169 (485)
198 KOG0254 Predicted transporter 54.5 3.1E+02 0.0067 29.6 14.9 140 290-437 63-210 (513)
199 KOG2504 Monocarboxylate transp 54.2 3.4E+02 0.0073 29.9 23.7 177 268-455 292-476 (509)
200 PRK10429 melibiose:sodium symp 52.7 1.3E+02 0.0028 32.0 11.1 115 303-419 37-158 (473)
201 PF05977 MFS_3: Transmembrane 51.8 1.3E+02 0.0029 33.2 11.1 115 305-424 42-159 (524)
202 PRK15034 nitrate/nitrite trans 51.4 3.6E+02 0.0078 29.4 24.3 54 299-352 277-330 (462)
203 TIGR00788 fbt folate/biopterin 47.6 3.8E+02 0.0083 28.7 13.7 109 296-410 48-161 (468)
204 KOG3626 Organic anion transpor 43.0 1.3E+02 0.0028 34.9 9.5 94 268-361 386-484 (735)
205 PF06783 UPF0239: Uncharacteri 42.2 19 0.00042 30.2 2.1 21 337-357 21-42 (85)
206 COG2223 NarK Nitrate/nitrite t 40.5 1.3E+02 0.0028 32.5 8.5 78 282-361 223-305 (417)
207 PRK05326 potassium/proton anti 40.0 3.1E+02 0.0066 30.5 11.8 104 313-434 194-297 (562)
208 PRK09669 putative symporter Ya 39.6 2.9E+02 0.0062 28.9 11.1 116 302-419 39-161 (444)
209 PF11700 ATG22: Vacuole efflux 38.1 5.6E+02 0.012 27.9 15.7 132 318-452 77-240 (477)
210 PRK09848 glucuronide transport 37.9 4.9E+02 0.011 27.2 12.7 29 43-71 274-302 (448)
211 KOG2532 Permease of the major 34.4 6.4E+02 0.014 27.4 16.7 187 264-456 248-448 (466)
212 TIGR00926 2A1704 Peptide:H+ sy 33.2 5.7E+02 0.012 29.2 12.7 37 309-348 28-64 (654)
213 PF05978 UNC-93: Ion channel r 32.4 2.1E+02 0.0047 26.4 7.7 83 323-414 52-135 (156)
214 TIGR00383 corA magnesium Mg(2+ 30.2 1.2E+02 0.0026 30.7 6.2 53 144-198 252-314 (318)
215 PF00083 Sugar_tr: Sugar (and 29.8 4.9 0.00011 41.9 -4.1 131 308-442 46-179 (451)
216 TIGR01667 YCCS_YHJK integral m 28.3 3.2E+02 0.0069 31.6 9.7 51 13-65 5-55 (701)
217 COG2271 UhpC Sugar phosphate p 28.2 8.3E+02 0.018 26.8 12.2 139 270-424 26-173 (448)
218 PF14986 DUF4514: Domain of un 27.6 40 0.00088 26.0 1.6 36 431-466 18-53 (61)
219 PF13347 MFS_2: MFS/sugar tran 27.4 88 0.0019 32.7 4.8 124 302-427 31-164 (428)
220 PF00083 Sugar_tr: Sugar (and 27.2 0.8 1.7E-05 47.9 -10.6 118 299-419 279-400 (451)
221 COG3300 MHYT domain (predicted 24.0 7.4E+02 0.016 24.8 10.2 124 315-448 13-157 (236)
222 TIGR02973 nitrate_rd_NapE peri 23.7 1.6E+02 0.0035 21.6 4.0 26 27-52 15-41 (42)
223 PRK15462 dipeptide/tripeptide 22.7 1E+03 0.023 26.1 15.2 44 156-200 149-192 (493)
224 COG3202 ATP/ADP translocase [E 22.1 9.7E+02 0.021 26.7 11.4 166 14-189 146-366 (509)
225 cd03495 SQR_TypeC_SdhD_like Su 22.0 93 0.002 26.6 3.1 64 264-327 32-98 (100)
226 PF06796 NapE: Periplasmic nit 21.3 1.8E+02 0.0038 22.7 4.1 40 13-52 13-54 (56)
227 PF12832 MFS_1_like: MFS_1 lik 20.2 1.3E+02 0.0028 24.3 3.4 38 31-68 33-70 (77)
No 1
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=4.2e-127 Score=1005.77 Aligned_cols=417 Identities=44% Similarity=0.776 Sum_probs=371.7
Q ss_pred cccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHH
Q 012017 7 INCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVIT 86 (473)
Q Consensus 7 ~~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ 86 (473)
++||| |||||||++|||+++|||||+|+|+|||++++++++|||+||+||||+||+|++|.++++||++|++||+++++
T Consensus 13 ls~w~-dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~ 91 (432)
T PF06963_consen 13 LSTWG-DRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLL 91 (432)
T ss_pred HHHHH-HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 68998 99999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHH
Q 012017 87 LLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITG 166 (473)
Q Consensus 87 ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG 166 (473)
++.....+.++...+..++++++++||++|||+++++|+|||||||+|+++|+ ++|++|||+||||||+||++||+++|
T Consensus 92 l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ckllaPl~vG 170 (432)
T PF06963_consen 92 LLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLFCKLLAPLFVG 170 (432)
T ss_pred HHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76654433222334456667777899999999999999999999999997776 89999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHH
Q 012017 167 FIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA 246 (473)
Q Consensus 167 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (473)
++++++|++++++++++||++|+++||+++++||+++|+|++|+++++++. +.+.++ ......
T Consensus 171 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~-~~~~~~----------------~~~~~~ 233 (432)
T PF06963_consen 171 LLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESES-SSDEES----------------SSESSS 233 (432)
T ss_pred HHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccc-cccccc----------------cccccc
Confidence 999999999999999999999999999999999999999997654442210 000000 000001
Q ss_pred HHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHh
Q 012017 247 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATI 326 (473)
Q Consensus 247 ~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~ 326 (473)
++++.++..+.++ +.++||++|+|||+|+||+|+|+|||||||||++||||++++|+|+++||++||+||++|++||+
T Consensus 234 ~~~~~~~~~~~~~--~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~ 311 (432)
T PF06963_consen 234 DPSILKRLWNPLR--TIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTW 311 (432)
T ss_pred hhhHHHHHHHHHH--HHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1112222223222 23689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCccc
Q 012017 327 LYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN---SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRC 403 (473)
Q Consensus 327 ~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~---~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg 403 (473)
+||+++||+|++|+|+|++++|++||.+|++++|.++ +.++.++|++|+++||+|||+||||++|++||+|||+|||
T Consensus 312 ~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg 391 (432)
T PF06963_consen 312 VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERG 391 (432)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhh
Confidence 9999999999999999999999999999999999988 5799999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHH
Q 012017 404 VVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVV 444 (473)
Q Consensus 404 ~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V 444 (473)
+|||+|+|+||+|||+||+++|++|+|+||+|++++|+++|
T Consensus 392 ~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V 432 (432)
T PF06963_consen 392 AVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV 432 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence 99999999999999999999999999999999999999876
No 2
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-110 Score=838.97 Aligned_cols=450 Identities=54% Similarity=0.858 Sum_probs=401.6
Q ss_pred cccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHH
Q 012017 7 INCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVIT 86 (473)
Q Consensus 7 ~~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ 86 (473)
.+||| ||||||+++|||+.++||||+++|+||++++++++++||+||+|+|+.+|+|++|+++++||+|++++++++..
T Consensus 38 lt~wg-dR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~ 116 (503)
T KOG2601|consen 38 LTTWG-DRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVIT 116 (503)
T ss_pred HhHhh-HhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhh
Confidence 47999 99999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHH
Q 012017 87 LLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITG 166 (473)
Q Consensus 87 ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG 166 (473)
++..+++++.+.|+|..|+++++..|+|++|+++|.+|.+|||||||+.+|++|+.|++|||++|||||.+|+++|+..|
T Consensus 117 ~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg 196 (503)
T KOG2601|consen 117 LLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITG 196 (503)
T ss_pred heeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhc
Confidence 87777788888899999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHH
Q 012017 167 FIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA 246 (473)
Q Consensus 167 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (473)
+|+|++|.+.+|+++++||++|+++||+++.+||+.+|+|+.|+.+|+.|.++++.+..+.+.+-.....+...-..+.+
T Consensus 197 ~Iitfvsl~~~~g~f~~w~~vsm~~ey~ll~~vy~g~palavs~~~k~~rs~~~q~~~~~~~~s~~v~~~~s~~~~~~~~ 276 (503)
T KOG2601|consen 197 LIITFVSLRASAGTFAAWALVSMWVEYWLLISVYIGVPALAVSKGRKNLRSKESQVELRDCQSSFPVAGTHSEGFMTNLA 276 (503)
T ss_pred ccceeechhhhhhhhHHHHHHHHHHHHHHHHHHHhCCcHHhhhcchhhhhhhhheeeeecCCcccccccccceeeecccc
Confidence 99999999999999999999999999999999999999999876666555544444332221111100001000000000
Q ss_pred HHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHh
Q 012017 247 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATI 326 (473)
Q Consensus 247 ~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~ 326 (473)
.+.-.-....+..+.++++.|+.||.||+++|+.+++++|+||+|||.+||+|+.++|.|.+.+|+.||+++..|+.+|.
T Consensus 277 ~~~~~~~~l~~~~~~sF~~~w~~y~nq~vvl~g~slallf~tvl~f~~L~t~~~~~~G~p~~i~gi~~g~Sa~tg~~~tv 356 (503)
T KOG2601|consen 277 SRYGILVILPRFSISSFRSAWRVYFNQEVVLPGVSLALLFFTVLGFGVLMTATLFWPGSPMYIIGIGRGISAGTGLAATV 356 (503)
T ss_pred ccCccccccchhhhHHHHhHHHhhccCeeeehhhHHHHHHHHHHhhheeeeeeeecCCCCceehhhccCcchhhhhhhhh
Confidence 00000012233445567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchh
Q 012017 327 LYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVG 406 (473)
Q Consensus 327 ~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~ 406 (473)
.||++.+|.++.|+|.|+.|.|.. -+.+|.++|++|++.||+|||+|||++||+|||+|||+||+.++
T Consensus 357 ~~~~~~~~~nl~rtg~ws~~sq~s------------v~~isv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~ 424 (503)
T KOG2601|consen 357 HYPLMQSRTNLLRTGLWSFWSQDS------------VSKISVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVF 424 (503)
T ss_pred hcccccCccCCCcceehhhccccc------------chhHHHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhH
Confidence 999999999999999999999975 47899999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhCCccChhhHh
Q 012017 407 GVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLL 469 (473)
Q Consensus 407 gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~~~~rghl~h~~~~~ 469 (473)
|||||||+.||++|++++|++|+|++|+.+++||+.+|.+||++|++|.+|.|.|.+|++|..
T Consensus 425 gvqnsL~~~ldll~~ilvIi~pnp~~F~iltliS~~fVs~g~m~y~~~l~q~~~~~~hl~~~P 487 (503)
T KOG2601|consen 425 GVQNSLNSALDLLKDILVIIVPNPKDFGILTLISFSFVSLGHMFYTFYLAQIRSHNFHLEKIP 487 (503)
T ss_pred hHHHHHHHHHHHHHHhEEEEecCccceeeeeeehhhHhhhhhhhhhhhhhhccccccchhcCc
Confidence 999999999999999999999999999999999999999999999999999999999997763
No 3
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.56 E-value=2.1e-12 Score=140.25 Aligned_cols=352 Identities=18% Similarity=0.168 Sum_probs=219.6
Q ss_pred ccccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHH
Q 012017 6 GINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVI 85 (473)
Q Consensus 6 ~~~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~ 85 (473)
.+|.+| |-|..+|.+.++.++. +|=..+|+.+....+-.++|++.-|-++||.||.|++..+-.++-+. +.. +
T Consensus 20 ~iS~lG-~~~~~va~~wlv~~lt-~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~---~~~--L 92 (524)
T PF05977_consen 20 LISNLG-DWMQTVALAWLVTQLT-GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALV---ALL--L 92 (524)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH---HHH--H
Confidence 367888 9999999999988874 67899999999999999999999999999999999986554443222 222 1
Q ss_pred HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHH
Q 012017 86 TLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAIT 165 (473)
Q Consensus 86 ~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~v 165 (473)
..+...+ ..+-|. +++++.+.++...+..-+.+-.+-+ +.++ ++|.+.|+...-.-..+.++||.+.
T Consensus 93 ~~l~~~~-~~~~~~----Ll~~~fl~g~~~a~~~PA~~A~ip~-----lV~~---~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 93 AVLAFFG-LLSPWL----LLILTFLLGIGSAFFNPAWQAIIPE-----LVPK---EDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHhC-cCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-----hccH---hhHHHHHHHHHHHHHHHHhccchHH
Confidence 1111111 111222 2233445677777766666666554 2233 5699999988888899999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHH
Q 012017 166 GFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAEL 245 (473)
Q Consensus 166 G~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (473)
|.+++..+...+ ...|.+|+.+=..++.+.- | +.+ +++.+ +
T Consensus 160 G~Lva~~G~~~~----f~inalsfl~~i~~l~~~~---~------~~~-----~~~~~-------------------~-- 200 (524)
T PF05977_consen 160 GILVAFFGAAAA----FLINALSFLISILALLRWK---P------PPP-----PSSLP-------------------R-- 200 (524)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcc---c------ccc-----ccccc-------------------h--
Confidence 999997776544 4456666655332222110 0 000 00000 0
Q ss_pred HHHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcC-CchhHHHHHHh-cCCCchHHHHHhHHHHHHHhh
Q 012017 246 AEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEW-EGIPAYIIGIARGISATIGIA 323 (473)
Q Consensus 246 ~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLs-f~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~ 323 (473)
+++.+ ..++|++-..++|.....+..+.++.-.-+ +-.++--|.++ -|.++...|++-+..++-++.
T Consensus 201 ------e~~~~-----~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~ 269 (524)
T PF05977_consen 201 ------ERFFS-----ALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAIL 269 (524)
T ss_pred ------hhhhh-----hHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 00111 124678766777777666655555433221 22233345554 488999999999999999999
Q ss_pred HHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcc
Q 012017 324 ATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDR 402 (473)
Q Consensus 324 gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~R 402 (473)
|+++.|++.+|++..|.-..+......++ .+.++ .+.. .....+++.|.... .+.-+..-++|+.+|++.|
T Consensus 270 Gal~~~~l~~~~~~~~lv~~~~~~~a~~~--~~lal-~~~~~~~~~~l~l~G~~~~-----~~~~~~~t~~Q~~~P~~~~ 341 (524)
T PF05977_consen 270 GALLLPRLRRRLSSRRLVLLASLLFALAL--LLLAL-SPSFWLALIALFLAGAAWI-----IANSSLNTLVQLSVPDWVR 341 (524)
T ss_pred HHHHHHHhhcccCcchhhHHHHHHHHHHH--HHHhc-chHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhCCHHHH
Confidence 99999999999886554333332222111 11111 1211 22334455554322 2344555689999999999
Q ss_pred cchhhhhHHHHHH-HHHHHHHhHHhccCCCcchhHHH
Q 012017 403 CVVGGVQNSLQST-MDLMAYTMGIIISNPQDFWKLIL 438 (473)
Q Consensus 403 g~v~gvq~Sl~sl-f~ll~~v~~Ii~~~P~~F~~lv~ 438 (473)
|+++++.....+. +-+-..+.+.+. +.++....
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la---~~~g~~~a 375 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLA---DHFGVRTA 375 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCHHHH
Confidence 9999987655554 455577777776 44554433
No 4
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=6.8e-10 Score=110.47 Aligned_cols=341 Identities=16% Similarity=0.112 Sum_probs=197.9
Q ss_pred ccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHH
Q 012017 8 NCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITL 87 (473)
Q Consensus 8 ~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~l 87 (473)
+-++ +-+...+.++++.+. ..+-.-.+.......+..+++++..|.+.||..|.++...+.+..-+. +.. . .
T Consensus 11 ~~~~-~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~----~~~-~-~ 82 (365)
T TIGR00900 11 SLIG-TAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL----VAV-L-P 82 (365)
T ss_pred HHHH-HHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH----HHH-H-H
Confidence 3344 667888899988874 456666777777788889999999999999999999876664432222 111 1 1
Q ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHH
Q 012017 88 LFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGF 167 (473)
Q Consensus 88 l~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~ 167 (473)
.. ......+...+.+... +.+....... ....+.-.||. + + +++.+.|+...-......+++|.+.|.
T Consensus 83 ~~-~~~~~~~~~~~~~~~~---l~g~~~~~~~-~~~~~~~~~~~----~--~-~~~~~~~~~~~~~~~~g~~~g~~l~~~ 150 (365)
T TIGR00900 83 FV-ALLGGLNIWQVYVLAG---ILAIAQAFFT-PAYQAMLPDLV----P--E-EQLTQANSLSQAVRSLFYIVGPGIGGL 150 (365)
T ss_pred HH-HHcCCCcHHHHHHHHH---HHHHHHHHHH-HHHHHHHHhcC----C--H-HHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 11 1011122222222221 2222222211 22233344553 1 2 468899999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHH
Q 012017 168 IISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAE 247 (473)
Q Consensus 168 l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (473)
+.+..+.+....+.+...+++...-.. + ..|+- ++ .+.++ .+++..
T Consensus 151 l~~~~g~~~~~~~~~~~~~~~~~~~~~----~--~~~~~-----~~------~~~~~-----------------~~~~~~ 196 (365)
T TIGR00900 151 MYATLGIKWAIWVDAVGFAISALLIVS----V--RIPEL-----AA------SEIQA-----------------LSNAVL 196 (365)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHh----c--ccccC-----CC------ccccc-----------------cchhHH
Confidence 988777766555444433333322111 0 11110 00 00000 000000
Q ss_pred HHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhc-CCc-hhHHHHHHh-cCCCchHHHHHhHHHHHHHhhH
Q 012017 248 KRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVL-SFG-TLMTATLEW-EGIPAYIIGIARGISATIGIAA 324 (473)
Q Consensus 248 ~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVL-sf~-~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~g 324 (473)
+ + ..++++..+++|.+...+...+++.... +.. ..+..|.++ .|+++...|..-....+.++.+
T Consensus 197 ~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (365)
T TIGR00900 197 R--------D-----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLG 263 (365)
T ss_pred H--------H-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 0 0 0234556667776665555444444332 222 334445554 6999999999999999999999
Q ss_pred HhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccc
Q 012017 325 TILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCV 404 (473)
Q Consensus 325 T~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~ 404 (473)
++..+++.||.|..+.-..+......++. ...+.+. +...+..+.++.=+|.=........++||.+|+++||+
T Consensus 264 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (365)
T TIGR00900 264 ALLLGLLGRYFKRMALMTGAIFVIGLAIL---VVGLTPP---NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGR 337 (365)
T ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHH---HHHhhch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999977765554333222221 1111221 12222222222223333455567778999999999999
Q ss_pred hhhhhHHHHHHHHHHHH
Q 012017 405 VGGVQNSLQSTMDLMAY 421 (473)
Q Consensus 405 v~gvq~Sl~slf~ll~~ 421 (473)
..|+.+..+++...+.-
T Consensus 338 ~~~~~~~~~~~~~~~g~ 354 (365)
T TIGR00900 338 VFGAQFSLSHAAWPLGL 354 (365)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998776543
No 5
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.32 E-value=4.6e-09 Score=109.16 Aligned_cols=337 Identities=14% Similarity=0.011 Sum_probs=192.1
Q ss_pred cccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHH
Q 012017 7 INCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVIT 86 (473)
Q Consensus 7 ~~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ 86 (473)
++++| |-+-.++.+..+.+.. .+-...+.....-.+..++++|..|.+.||.+|.|+...+.+.+-++.+ .++
T Consensus 14 ~~~~~-~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~-~~~---- 86 (393)
T PRK11195 14 FSALA-DNALLFAAIALLKELH-YPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL-LML---- 86 (393)
T ss_pred HHHHH-HHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH-HHH----
Confidence 56676 7788888887765553 3334455555666678899999999999999999999888776644311 111
Q ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHH
Q 012017 87 LLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITG 166 (473)
Q Consensus 87 ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG 166 (473)
.. . +. . +... +.|..+.... ....++=+||+ ++ +++.+.|+.+.-......+++|.+.|
T Consensus 87 -~~-~-----~~--~-~~r~---l~G~~~a~~~-pa~~a~i~~~~------~~-~~~~~a~~~~~~~~~~~~~~Gp~lgG 145 (393)
T PRK11195 87 -FG-I-----HP--L-LAYG---LVGIGAAAYS-PAKYGILTELL------PG-EKLVKANGWMEGSTIAAILLGTVLGG 145 (393)
T ss_pred -HH-H-----HH--H-HHHH---HHHHHHHHHH-HHHHHHHHHHc------CH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 0 11 1 1111 1121111111 22344456765 22 57999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHH
Q 012017 167 FIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA 246 (473)
Q Consensus 167 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (473)
.+.++. ......+....-+++. . .+...|+-.. ++ + + .++ + ...
T Consensus 146 ~l~~~~-~~~~~~i~~~~~~~~~----~----~~~~l~~~~~---~~--~--~--~~~---------------~--~~~- 189 (393)
T PRK11195 146 ALADPH-AEAALAVCALIYLLAA----L----FNLFIPRLGA---RR--P--G--QSW---------------N--PIA- 189 (393)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHH----H----HHhcCCCCcc---cc--c--c--cCC---------------C--HHH-
Confidence 998753 2222222111111111 1 1122342110 00 0 0 000 0 000
Q ss_pred HHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHH-HhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhH
Q 012017 247 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALL-FFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAA 324 (473)
Q Consensus 247 ~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalL-Y~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~g 324 (473)
..+. ..++++.-+++|.+..++....+ ++........+..|+.. -|+++...|..-+..++.++.|
T Consensus 190 -------~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g 257 (393)
T PRK11195 190 -------LLRD-----FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVG 257 (393)
T ss_pred -------HHHH-----HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Confidence 0000 02334555677776655544333 32222222233456654 5999999999999999999999
Q ss_pred HhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCc-cc
Q 012017 325 TILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESD-RC 403 (473)
Q Consensus 325 T~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~-Rg 403 (473)
++..+++.+|.+..+.-..++.. .. +..+ .. +.+ + .........+.=+|...++...+..+|+..||+. +|
T Consensus 258 ~~~~~~l~~~~~~~~~~~~g~~~-~~-~~~~-~~-~~~-~---~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g 329 (393)
T PRK11195 258 AGAAARLVTLETVLRVLPAGILM-GL-VVLL-MA-LQH-S---LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAG 329 (393)
T ss_pred HHHHHHHhcCCcccchHHHHHHH-HH-HHHH-HH-HHh-H---HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccch
Confidence 99999999888765543333211 00 0000 11 111 1 1222223333444667778888888999777654 79
Q ss_pred chhhhhHHHHHHHHHHHHHhHHhc
Q 012017 404 VVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 404 ~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
++.|+.+..+++...+...+.-..
T Consensus 330 ~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 330 HSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred hHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999877766665443
No 6
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.30 E-value=7.5e-10 Score=129.48 Aligned_cols=340 Identities=10% Similarity=0.026 Sum_probs=188.7
Q ss_pred cchhHHHHHHHHHHhcCCch-----hHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHH
Q 012017 13 CRMWEFSVGLYMISVWPDSL-----LFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITL 87 (473)
Q Consensus 13 dRmweFav~L~L~~l~p~sL-----l~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~l 87 (473)
|.+-.+++........-++. ...++...+-.+..++++|..|.+.||++|.++++......-...+.+. +..
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~---~~~ 103 (1140)
T PRK06814 27 DNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI---YGF 103 (1140)
T ss_pred HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 55566665433332222222 3345555556677789999999999999999987766554433322111 111
Q ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHH
Q 012017 88 LFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGF 167 (473)
Q Consensus 88 l~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~ 167 (473)
.. .++..+.+ +..+.|..+.... -...++=+||+. + +.+.+.|+.+.-...+..+++|.+.|+
T Consensus 104 ~~------~s~~~l~~---~~~l~gi~~a~~~-p~~~a~l~~~~~----~---~~~~~a~~~~~~~~~ig~~igp~l~g~ 166 (1140)
T PRK06814 104 HL------NSVPLLFA---ALFLMGIHSALFG-PIKYSILPDHLN----K---DELLGANALVEAGTFIAILLGTIIGGL 166 (1140)
T ss_pred HH------hhHHHHHH---HHHHHHHHHHhhc-hHHHHhhHhhcC----c---cccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 11 12222222 2223333333332 234445577752 2 468999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHH
Q 012017 168 IISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAE 247 (473)
Q Consensus 168 l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (473)
+....+.....++.....++.++. . ..+|.-. .. + .+.+. +. ...
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~----~~--~---~~~~~---------------~~-~~~-- 211 (1140)
T PRK06814 167 ATISGNFVILVALLMGIAVLGWLA----S----LFIPKTG----NA--A---PDLKI---------------DR-NII-- 211 (1140)
T ss_pred HHhccccHHHHHHHHHHHHHHHHH----H----hhCCCCC----CC--C---CCCee---------------cc-chH--
Confidence 998777655442222222222111 1 1122110 00 0 00000 00 000
Q ss_pred HHHHHHHHhhhcccccccchhhhhhccchhh-hHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHH
Q 012017 248 KRWRWKIIDWISNAPCVGAWQVYLKQEVVLP-GVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAAT 325 (473)
Q Consensus 248 ~~~~~~~~~~l~~~~~~~~w~~Y~~q~vfla-slalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT 325 (473)
+ . ...+|+.-+++|.+.. .++..+.++..-++...+..|++. .|.++...|.+-+.-++.+++|.
T Consensus 212 ----~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 212 ----R----S-----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred ----H----H-----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 0 0 0245666677775544 444444444433344466778877 49999999999999999999999
Q ss_pred hhHHHHHhhhhhhhHHHHHHHHHHH-HHHHHHH---------------HhhccchhHHHHHHHhhhhhhcchhhhhhhhh
Q 012017 326 ILYPILQSRISTLRTGLWSIWSQWF-CLLICVA---------------SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSV 389 (473)
Q Consensus 326 ~~~p~l~~riGlvrtGl~~l~~Q~~-~L~~~v~---------------s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v 389 (473)
++..++.++.+..+...++...-.+ ++.++.. .++...+.+ .+..+.++.=+|.-.+-...
T Consensus 279 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~ 355 (1140)
T PRK06814 279 FLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW---RILIDLFGLAAAGGLYIVPL 355 (1140)
T ss_pred HHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH---HHHHHHHHHHHHHHHhHHHH
Confidence 9999998776544432322222111 1112211 111111111 11122222224556666678
Q ss_pred hhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 390 IQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 390 ~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
.-++|+.+|+++||++.|+.+.++++.-.+.-++
T Consensus 356 ~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 356 FAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999988865544443
No 7
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=1.5e-09 Score=112.57 Aligned_cols=342 Identities=16% Similarity=0.107 Sum_probs=187.7
Q ss_pred ccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHH
Q 012017 8 NCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITL 87 (473)
Q Consensus 8 ~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~l 87 (473)
+.++ +-+..+..+.++.+... +-.-.+.......+..++.++..|.+.||.+|.+++....+..-++. .. ...
T Consensus 29 ~~~~-~~~~~~~~~~~~~~~~~-s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~----~~-~~~ 101 (417)
T PRK10489 29 SIFG-LGLLGVAVPVQIQMMTG-STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGF----IG-LAL 101 (417)
T ss_pred HHHH-HHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHH----HH-HHH
Confidence 3444 56777888888877643 44456666667778888899999999999999988665543332221 11 000
Q ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHH
Q 012017 88 LFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGF 167 (473)
Q Consensus 88 l~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~ 167 (473)
.... ..+++..+.++. .+.+........+. .+.-.||+ +. +.+.+.|+...-.......++|.+.|.
T Consensus 102 ~~~~--~~~~~~~l~~~~---~~~g~~~~~~~~~~-~~~~~~~~----~~---~~~~~~~~~~~~~~~~g~~~g~~l~g~ 168 (417)
T PRK10489 102 NAFL--PEPSLLAIYLLG---LWDGFFGSLGVTAL-LAATPALV----GR---ENLMQAGAITMLTVRLGSVISPALGGL 168 (417)
T ss_pred HHHc--CCCcHHHHHHHH---HHHHHHHHHHHHHH-hhhhhhcc----CH---HHHHHHHHHHHHHHhHHHHhHHHHHHH
Confidence 0010 112222222211 12222222222121 12222332 22 457888888888899999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHH
Q 012017 168 IISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAE 247 (473)
Q Consensus 168 l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (473)
+.+..+++....+.++..+++.+. + ...|+..++ + ++. + +..++
T Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~----~----~~l~~~~~~---~---------~~~-~--------------~~~~~- 212 (417)
T PRK10489 169 LIAAGGVAWNYGLAAAGTFITLLP----L----LRLPALPPP---P---------QPR-E--------------HPLRS- 212 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHH----H----HhCCCCCCC---C---------ccc-c--------------cchHH-
Confidence 987666555544433333333222 1 123321100 0 000 0 00000
Q ss_pred HHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHh
Q 012017 248 KRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATI 326 (473)
Q Consensus 248 ~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~ 326 (473)
..++++..+++|.+...+...+++...-++......|+++ .|+++...|..-+..++.++.+.+
T Consensus 213 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 277 (417)
T PRK10489 213 ---------------LLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGAL 277 (417)
T ss_pred ---------------HHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHH
Confidence 0123444566666554444433332223444455668888 799999999999999999999999
Q ss_pred hHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH--HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccc
Q 012017 327 LYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV--AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCV 404 (473)
Q Consensus 327 ~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~--s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~ 404 (473)
+.+++.+|.+..|.-..+..... ++...+....+.. ....++.| +|.=.......-++||.+|++.||+
T Consensus 278 ~~~~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~p~~~~g~ 348 (417)
T PRK10489 278 TSGWLAHSARPGLLMLLSTLGSF----LAVGLFGLMPMWILAVLCLALFG-----YLSAISSLLQYTLLQTQTPDEMLGR 348 (417)
T ss_pred HHHHhhhccCcchHHHHHHHHHH----HHHHHHHccchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 99999887664443333322222 1111121111111 11122222 2221233444568899999999999
Q ss_pred hhhhhHHHHHHHHH-HHHHhHHhccC
Q 012017 405 VGGVQNSLQSTMDL-MAYTMGIIISN 429 (473)
Q Consensus 405 v~gvq~Sl~slf~l-l~~v~~Ii~~~ 429 (473)
++|+.++.+++-.. -..+.+.+...
T Consensus 349 ~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 349 INGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 99999998886554 44455566543
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=3.6e-08 Score=98.28 Aligned_cols=379 Identities=15% Similarity=0.105 Sum_probs=189.4
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccc
Q 012017 15 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 94 (473)
Q Consensus 15 mweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~ 94 (473)
+..++.+.+..+ +.-+---.+.....-.+..++.++..|.+.||..|.++...+.+..-+. +. .+.. .
T Consensus 12 ~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~---~~~~-~--- 79 (399)
T TIGR00893 12 NLSFAAPMLQED-LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TG---LQAF-A--- 79 (399)
T ss_pred hhhHhHHHHHHh-hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HH---HHHH-H---
Confidence 345556664444 3334444455555566777888899999999999999876654422221 11 1111 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhH
Q 012017 95 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 174 (473)
Q Consensus 95 ~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~ 174 (473)
.++..+.+... +.|.-..... ....+.-.||. + +++..+.++...-.-....+++|.+.|.+....++
T Consensus 80 -~~~~~~~~~~~---l~g~~~~~~~-~~~~~~~~~~~----~---~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 147 (399)
T TIGR00893 80 -GAYVSLYILRV---LLGAAEAPFF-PGIILIVASWF----P---ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW 147 (399)
T ss_pred -cCHHHHHHHHH---HHHHHHHhhh-hHHHHHHHHhC----C---HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc
Confidence 12222222211 1121111111 11122223342 1 24577888888888888999999999988776676
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHH
Q 012017 175 QASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKI 254 (473)
Q Consensus 175 ~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (473)
+......++..++...+-+.+ .+..|+-. +.. ++++.+...+. . ..+.++..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~----~~~~~~~~~~~--~----~~~~~~~~~---------- 200 (399)
T TIGR00893 148 QWAFIIEGVLGIIWGVLWLKF----IPDPPQKA---KWL----TEEEKYIVVGG--L----LAEQQGKGP---------- 200 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhhe----ecCCCCcc---ccC----CHHHHhhcchh--h----ccccccccc----------
Confidence 655554444444433322211 11111100 000 00000000000 0 000000000
Q ss_pred HhhhcccccccchhhhhhccchhhhHHHHHHHh-hhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHH
Q 012017 255 IDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQ 332 (473)
Q Consensus 255 ~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~-TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~ 332 (473)
+......++..+++|.+...+...+++. ..-.+......|+++ .|+++...|..-+...+.++.+.+...++.
T Consensus 201 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 275 (399)
T TIGR00893 201 -----STPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLS 275 (399)
T ss_pred -----cCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0011234555666665544443333333 333455556677775 699999999999999999999999999999
Q ss_pred hhhhhhhHHHHH--HHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhH
Q 012017 333 SRISTLRTGLWS--IWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN 410 (473)
Q Consensus 333 ~riGlvrtGl~~--l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~ 410 (473)
+|+|-.+.-+.. ...-...+..+...+..+. .......+......-.+ .++......+++|.+|+++||+..|+.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (399)
T TIGR00893 276 DLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-VNIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLIN 353 (399)
T ss_pred HHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHH
Confidence 998865411111 0111111112222222210 01111111112221122 2245667778999999999999999999
Q ss_pred HHHHHHHHHHHHh-HHhccCCCcchhHHHHHHHHHHHHHHHH
Q 012017 411 SLQSTMDLMAYTM-GIIISNPQDFWKLILISVIVVTLAAILY 451 (473)
Q Consensus 411 Sl~slf~ll~~v~-~Ii~~~P~~F~~lv~iS~~~V~~a~~~y 451 (473)
..+++...+.-.+ +.+...-.++.+...+.......+...+
T Consensus 354 ~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 354 SLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9998887665444 3443322224444433333334444333
No 9
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.12 E-value=3.2e-09 Score=105.27 Aligned_cols=334 Identities=19% Similarity=0.215 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccc
Q 012017 15 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 94 (473)
Q Consensus 15 mweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~ 94 (473)
+.....+.++.+-+.-+-.-.+.......+...++++..|.+.||..|.+++..+.+..-++ +. +..+.
T Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~----- 82 (352)
T PF07690_consen 14 IISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG----SL--LLAFA----- 82 (352)
T ss_dssp HHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH----HH--HHHHH-----
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH----HH--Hhhhh-----
Confidence 34455554444444334444666666677788999999999999999999887776544443 11 11111
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhH
Q 012017 95 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 174 (473)
Q Consensus 95 ~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~ 174 (473)
.+.+ .+.+.. .+.+........+ ..+.-.||. ++ ++..+.|+.+.-......+++|.+.|.+.+..+.
T Consensus 83 ~~~~-~~~~~~---~l~g~~~~~~~~~-~~~~i~~~~----~~---~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~ 150 (352)
T PF07690_consen 83 SNFW-LLLIAR---FLLGIGSGFFSPA-SNALIADWF----PP---EERGRAFGILSAGFSLGSILGPLLGGFLISYFGW 150 (352)
T ss_dssp CCHH-HHHHHH---HHHHHHHHHHHHH-HHHHHHHCC----CT---CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH
T ss_pred hhHH-HHhhhc---ccccccccccccc-ccccccccc----hh---hhhhhccccccchhhhhhhcccchhhhhhhcccc
Confidence 1222 222222 1223333233222 233334553 22 3578999999999999999999999999877776
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHH
Q 012017 175 QASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKI 254 (473)
Q Consensus 175 ~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (473)
+....+.++..+++.+.=+.+ .| ++++++ + .+.++ +++.+.
T Consensus 151 ~~~~~~~~~~~~~~~il~~~~-------~~---~~~~~~-~----~~~~~---------------~~~~~~--------- 191 (352)
T PF07690_consen 151 RWAFLISAILSLIAAILFILF-------LP---EPPPPR-E----RESPK---------------ESESKK--------- 191 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHCC-------C------STTT-T------SST---------------TTT--H---------
T ss_pred ccccccccchhhhhhhhHhhh-------hh---hccccc-c----ccccc---------------cccccc---------
Confidence 666666666666654321111 11 000000 0 00000 000000
Q ss_pred HhhhcccccccchhhhhhccchhhhHHHHHHH-hhhcCCchhHHHHH-HhcCCC-chHHHHHhHHHHHHHhhHHhhHHHH
Q 012017 255 IDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATL-EWEGIP-AYIIGIARGISATIGIAATILYPIL 331 (473)
Q Consensus 255 ~~~l~~~~~~~~w~~Y~~q~vflaslalalLY-~TVLsf~~lmtaYl-~~~G~s-~~~ig~~Rg~gav~Gl~gT~~~p~l 331 (473)
++...+.|+...++|.++..+...+++ +..-++......|+ +..|++ ....|.+-++..+.++.+.++.+++
T Consensus 192 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 266 (352)
T PF07690_consen 192 -----PKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRL 266 (352)
T ss_dssp -----HHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----ccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001123588888888665222222222 22333555666674 457999 7999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHH
Q 012017 332 QSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS 411 (473)
Q Consensus 332 ~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~S 411 (473)
.+|+|..+.-.+.......+. ..........+......+.++.-+|.-....+...++||.+|+++||++.|+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 342 (352)
T PF07690_consen 267 SDRFGRRRRLLIAILLLILGA----LGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNS 342 (352)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH----HHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHHH----HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999998666555444332222 1111111111122222233333334445577888999999999999999999999
Q ss_pred HHHHHHHH
Q 012017 412 LQSTMDLM 419 (473)
Q Consensus 412 l~slf~ll 419 (473)
.+++...+
T Consensus 343 ~~~~~~~i 350 (352)
T PF07690_consen 343 IGSLGGII 350 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98876543
No 10
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=6.8e-08 Score=112.55 Aligned_cols=342 Identities=14% Similarity=0.097 Sum_probs=183.8
Q ss_pred cchhHHHHHHHHHHhcCC--chhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhh
Q 012017 13 CRMWEFSVGLYMISVWPD--SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFF 90 (473)
Q Consensus 13 dRmweFav~L~L~~l~p~--sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~ 90 (473)
|++-..++..++..-+.. +-...++...+-.+..+++++..|.+.||..|.+++..+.+++-+..+.... ...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~----~~~- 99 (1146)
T PRK08633 25 DLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVL----AYY- 99 (1146)
T ss_pred HHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHH----HHH-
Confidence 555555555555443332 3344566666777778899999999999999999887776544333221111 111
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhh
Q 012017 91 SSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIIS 170 (473)
Q Consensus 91 ~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t 170 (473)
. .++.. +++...+.|....+.. ....+.=.||+ .+ +.+.+.|+...-.-.+..+++|++.|.+..
T Consensus 100 ~----~~~~~---l~~~r~l~G~~~~~~~-~~~~~~i~~~~----~~---~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 100 L----GWFWL---AFAVTFLLGAQSAIYS-PAKYGIIPELV----GK---ENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred H----ccHHH---HHHHHHHHHHHHHhhc-hHHHhhhHHhc----Cc---ccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11111 1111122232222222 11223444553 22 457889999999999999999999999976
Q ss_pred h--------hhHHH--HHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCcccccccccccc
Q 012017 171 F--------VSLQA--SAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDE 240 (473)
Q Consensus 171 ~--------~s~~~--~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (473)
. ..... ...+.....++.+ .+.. ..|+.....+. .+ +. . .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~-------~~-~~--~------------~ 214 (1146)
T PRK08633 165 SVNGNTPSEILGRIAPAGLVLLAVAVLGL----IFAY----RLPKVPAAAPE-------VF-DK--K------------K 214 (1146)
T ss_pred hhccccccccccchHHHHHHHHHHHHHHH----HHHh----cCcCCCCCCcc-------cc-cc--c------------c
Confidence 5 11111 1111111111111 1111 12321110000 00 00 0 0
Q ss_pred chhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhH-HHHHHHhhhcCCchhHHHHHHh-cCCCch-HHHHHhHHH
Q 012017 241 NNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGV-SLALLFFTVLSFGTLMTATLEW-EGIPAY-IIGIARGIS 317 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflasl-alalLY~TVLsf~~lmtaYl~~-~G~s~~-~ig~~Rg~g 317 (473)
.... + ....+|+.-+++|.+...+ +..+.++....+...+..|++. .|+++. ..|.+-+..
T Consensus 215 ~~~~---~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~ 278 (1146)
T PRK08633 215 YLFP---K-------------LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAAS 278 (1146)
T ss_pred cccH---H-------------HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHH
Confidence 0000 0 0023455556666544433 3333333322333455667765 699999 999999999
Q ss_pred HHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q 012017 318 ATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLV 397 (473)
Q Consensus 318 av~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V 397 (473)
.+..+.|.++..++.+|.+..+.-.++.....+++. ...+.+ +...++.+..+.-+|.-++......++|+.+
T Consensus 279 ~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 351 (1146)
T PRK08633 279 AIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLF---LLPTAP----SLASVLVLFFLFGFSAGLFIVPLNALIQFRA 351 (1146)
T ss_pred HHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHH---HHHHhh----hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC
Confidence 999999999999999999865544333332222211 111111 1222223333333444555666778999999
Q ss_pred CCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 398 PESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 398 ~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
|+++||++.|+.+.++++...+...++.++
T Consensus 352 p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 352 PEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred CccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988775554444433
No 11
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=4.7e-07 Score=91.89 Aligned_cols=365 Identities=16% Similarity=0.180 Sum_probs=177.3
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccc
Q 012017 15 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 94 (473)
Q Consensus 15 mweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~ 94 (473)
+|.-..+.+..+. .-+---.+..--.-.+..++.++..|.+.||..|.+.+..+.+..-+. +.. +...
T Consensus 9 ~~~p~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~----~~~---~~~~---- 76 (377)
T PRK11102 9 MYLPALPVIAADF-GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALA----AVA---CALA---- 76 (377)
T ss_pred HHhccHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHH----HHH---HHHH----
Confidence 4445555555554 223233333334445556677888899999999988876554433322 111 1111
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHh-hhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhh
Q 012017 95 STNFIAFVLLVILTNISGAVGVIST-LAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 173 (473)
Q Consensus 95 ~~~~~~~~~l~~l~~~~~~i~~Las-~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s 173 (473)
+++..+.+... +.+....... .... .-.||. +. +.+.+.++...-.--....++|.+.|.+....+
T Consensus 77 -~~~~~~~~~~~---l~g~~~~~~~~~~~~--~~~~~~----~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 143 (377)
T PRK11102 77 -QTIDQLIYMRF---LHGLAAAAASVVINA--LMRDMF----PK---EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS 143 (377)
T ss_pred -ccHHHHHHHHH---HHHHHHHHHHHHHHH--HHHHhc----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 12222212111 1111111111 1122 223332 12 346777777767777888999999999887667
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHH
Q 012017 174 LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWK 253 (473)
Q Consensus 174 ~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (473)
.+......+...++....=+++ .|+-. +++ .++ + .+ .+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~--------~~~--~------------~~-~~~~------- 183 (377)
T PRK11102 144 WHAIFWVLALAAILAAALVFFF-------IPETL---PKE--------RRQ--P------------FH-LRTT------- 183 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-------CCccC---ccc--------ccC--C------------CC-hHHH-------
Confidence 6665555555554443332211 12100 000 000 0 00 0000
Q ss_pred HHhhhcccccccchhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHH-HhcCCCchHHHHHhHHHHHHHhhHHhhHHHH
Q 012017 254 IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATL-EWEGIPAYIIGIARGISATIGIAATILYPIL 331 (473)
Q Consensus 254 ~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl-~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l 331 (473)
.+.++..+++|.++.......+++.. ..+-....-|. ...|+++...|..-+...+.++.+.+...++
T Consensus 184 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 253 (377)
T PRK11102 184 ----------IRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF 253 (377)
T ss_pred ----------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233344455433322222222221 11111111233 3469999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHH
Q 012017 332 QSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS 411 (473)
Q Consensus 332 ~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~S 411 (473)
.+|+|..|.=..+...+.++.......-..+.+... +..++...=.+.=..--.....+||..| ++||+.+++.+.
T Consensus 254 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 329 (377)
T PRK11102 254 VRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWA---LVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGT 329 (377)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHH
Confidence 999998776555555444332211111111111111 1111111000000111122335677766 689999888777
Q ss_pred HHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 012017 412 LQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRK 460 (473)
Q Consensus 412 l~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~~~~rg 460 (473)
.+... -..+-.++.....+..+...........++.++..|.+|+++
T Consensus 330 ~~~~~--g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (377)
T PRK11102 330 LRFGI--GAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYLYASRPKK 376 (377)
T ss_pred HHHHH--HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 65433 233333333344455566655555555555556666665554
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.08 E-value=1.8e-07 Score=96.91 Aligned_cols=153 Identities=13% Similarity=0.157 Sum_probs=97.1
Q ss_pred chhhhhhccchhhhHHHHHHHhhhc----CCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHH
Q 012017 266 AWQVYLKQEVVLPGVSLALLFFTVL----SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTG 341 (473)
Q Consensus 266 ~w~~Y~~q~vflaslalalLY~TVL----sf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtG 341 (473)
+|+..+++|.+...+.+.++++... +....+..|+++.|+++...+..-.+..+.++.++++.+++.+|+|..|.-
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 4566677776655444333333322 234456778888999999999999999999999999999999999977665
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 342 LWSIWSQWFCLLICVASIWIHN-SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 342 l~~l~~Q~~~L~~~v~s~~~~~-~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
..+.....+.+. .....+. +.......+.|+...-.|.+. ...-++||.+|+++||+..|+..++.++-..+.
T Consensus 300 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~g 373 (426)
T PRK12307 300 SIGLLMSFLFIF---PLFRIPQDNYLLLGACLFGLMATNVGVGG---LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFN 373 (426)
T ss_pred HHHHHHHHHHHH---HHHHHccccHHHHHHHHHHHHHhcccHhH---HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHH
Confidence 555444322211 1111221 112122233333333334332 233467899999999999999998888877666
Q ss_pred HHhH
Q 012017 421 YTMG 424 (473)
Q Consensus 421 ~v~~ 424 (473)
..++
T Consensus 374 p~~~ 377 (426)
T PRK12307 374 SMAA 377 (426)
T ss_pred HHHH
Confidence 5444
No 13
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.06 E-value=4.2e-08 Score=99.27 Aligned_cols=147 Identities=14% Similarity=0.052 Sum_probs=91.9
Q ss_pred chhhhhhccc---hhhhHHHHHHHh-hhcCCchhHHHHHHhcCCCchHHHHHhHH-HHHHHhhHHhhHHHHHhhhhhhhH
Q 012017 266 AWQVYLKQEV---VLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYIIGIARGI-SATIGIAATILYPILQSRISTLRT 340 (473)
Q Consensus 266 ~w~~Y~~q~v---flaslalalLY~-TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~-gav~Gl~gT~~~p~l~~riGlvrt 340 (473)
++++.+++|. ++.-+...++|. ..-+....+..|+++.|+++..+|..-+. +.+.++.|.++.+++.+|+|.-|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3444555553 333333333332 22234456778888899999999988875 557889999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchh-------HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHH
Q 012017 341 GLWSIWSQWFCLLICVASIWIHNSL-------VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQ 413 (473)
Q Consensus 341 Gl~~l~~Q~~~L~~~v~s~~~~~~~-------~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~ 413 (473)
-.++...+...... ..+..... .+...+....++.=++.=.+..+..-++||..|+++||+..|+.++++
T Consensus 278 l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 278 LLLFGIVQALTNAG---FVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHHH---HHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 55555544332211 11111000 112222333333333334566677889999999999999999999887
Q ss_pred HH
Q 012017 414 ST 415 (473)
Q Consensus 414 sl 415 (473)
++
T Consensus 355 ~~ 356 (356)
T TIGR00901 355 AL 356 (356)
T ss_pred hC
Confidence 64
No 14
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.01 E-value=1.2e-06 Score=89.61 Aligned_cols=339 Identities=14% Similarity=0.128 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHH
Q 012017 37 IYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGV 116 (473)
Q Consensus 37 vygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~ 116 (473)
.......+...+++|..|.+.||..|.+....+.+..- +++.+ +.. .+++..+.+..+ +.+....
T Consensus 58 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~----~~~~~---~~~-----~~~~~~~~~~~~---~~g~~~~ 122 (408)
T PRK09874 58 LVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG----IVMVL---MGL-----AQNIWQFLILRA---LLGLLGG 122 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH----HHHHH---HHH-----HhhHHHHHHHHH---HHHHhhh
Confidence 33334556678889999999999999887655433211 11111 111 112332222221 1122111
Q ss_pred HHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 012017 117 ISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLF 196 (473)
Q Consensus 117 Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l 196 (473)
........ -.||+ .+ ++..+.|+...-......+++|.+.|.+.+..+.+.+..+.++..++..+.-++++
T Consensus 123 ~~~~~~~~--~~~~~----~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 123 FVPNANAL--IATQV----PR---NKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred hHHhHHHH--HHHhc----CH---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 12332 11 34677788887788888999999999998876766665555555444443322221
Q ss_pred HHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccch
Q 012017 197 MSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVV 276 (473)
Q Consensus 197 ~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vf 276 (473)
| + +.+ +.+ ++ +..+ .+ +. ..++++|.+
T Consensus 194 -------~---~--~~~-----~~~-~~----------------~~~~--~~----------------~~-~~~~~~~~~ 220 (408)
T PRK09874 194 -------R---E--NFQ-----PVS-KK----------------EMLH--MR----------------EV-VTSLKNPKL 220 (408)
T ss_pred -------c---c--Ccc-----ccc-ch----------------hhhH--HH----------------HH-HHhCcCCch
Confidence 1 0 000 000 00 0000 00 00 112333333
Q ss_pred -hhhHHHHHHHhhhc-CCchhHHHHHHhcCCCchH----HHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHH
Q 012017 277 -LPGVSLALLFFTVL-SFGTLMTATLEWEGIPAYI----IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWF 350 (473)
Q Consensus 277 -laslalalLY~TVL-sf~~lmtaYl~~~G~s~~~----ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~ 350 (473)
+..+...+++.... .+...+..|..+.+.+... .|..-++..+.++.+.....++.+|+|..|.-..+......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 300 (408)
T PRK09874 221 VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Confidence 22222233332222 3445566777776544433 33433344444556666677899999987766655544332
Q ss_pred HHHHHHHHhhccchh-HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccC
Q 012017 351 CLLICVASIWIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISN 429 (473)
Q Consensus 351 ~L~~~v~s~~~~~~~-~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~ 429 (473)
+..+ ..+.+... .....++.|+.. -.+-...+..+|+..|+++||++.|..++.+++...+-..++-..-+
T Consensus 301 ~~~~---~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 301 LLIP---MSFVQTPLQLGILRFLLGAAD-----GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred HHHH---HHHhccHHHHHHHHHHHHhhh-----HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 2221 11222211 112222333322 22334455677889999999999999999998887666655433322
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 012017 430 PQDFWKLILISVIVVTLAAILYTFHLYRIRKH 461 (473)
Q Consensus 430 P~~F~~lv~iS~~~V~~a~~~y~~~~~~~rgh 461 (473)
--.+...-.+..+....+ ..+..+..|+|.|
T Consensus 373 ~~g~~~~f~~~~~~~l~~-~~~~~~~~~~~~~ 403 (408)
T PRK09874 373 NYGFRAVFLVTAGVVLFN-AVYSWNSLRRRRI 403 (408)
T ss_pred hcchhHHHHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 122223333333333333 3444444444444
No 15
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.01 E-value=5.7e-07 Score=92.60 Aligned_cols=179 Identities=14% Similarity=0.092 Sum_probs=110.9
Q ss_pred cchhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH
Q 012017 265 GAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 343 (473)
Q Consensus 265 ~~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~ 343 (473)
.+|++-+|+|.++..+...+++... .++...+.-|+.+.|+++..+|.+-+++.+.++.+.+..+++.+|.|..|.=..
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~ 275 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL 275 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 3567778888877666555554332 345556667988899999999999999999999999999999999998776444
Q ss_pred HHHHHHHHHHHHHHHhhccchh-HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH--HHH
Q 012017 344 SIWSQWFCLLICVASIWIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD--LMA 420 (473)
Q Consensus 344 ~l~~Q~~~L~~~v~s~~~~~~~-~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~--ll~ 420 (473)
+.....++.. .. .+.+++. .-...++.|+. .|+ +=.+..+.+|+. |++++++..|..+++++..- +-.
T Consensus 276 ~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~g~~---~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 276 SAICGVVRWG--LM-GSTTALPWLIVIQILHCGT---FTV--CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHHHHHHHH--HH-HhhhhHHHHHHHHHHHHHH---HHH--HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4433322211 11 1122221 11122222222 222 233455667775 77778888887766655443 346
Q ss_pred HHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012017 421 YTMGIIISNPQDFWKLILISVIVVTLAAILYTFHL 455 (473)
Q Consensus 421 ~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~ 455 (473)
.+.+.+. +.++...+...+.+...+.+...|+
T Consensus 347 ~i~G~l~---~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK11128 347 VLSGFLY---QHLGAGVFWVMALVALPALFIRPKV 378 (382)
T ss_pred HHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHh
Confidence 6666776 4556666666666666665655554
No 16
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.99 E-value=7.9e-07 Score=91.39 Aligned_cols=362 Identities=15% Similarity=0.127 Sum_probs=173.3
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccc
Q 012017 15 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 94 (473)
Q Consensus 15 mweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~ 94 (473)
|=....+.++.+-+..|-...+.......+..+++++..|.+.||..|.|++..+.+.--++ +.... +.... .
T Consensus 33 ~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~----~~~~~-~~~~~--~ 105 (399)
T PRK05122 33 LPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS----GLLYL-LAGLL--A 105 (399)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH----HHHHH-Hhhhh--h
Confidence 34445666665555556666777777778888999999999999999999987775533222 11111 11110 0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhH
Q 012017 95 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 174 (473)
Q Consensus 95 ~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~ 174 (473)
+.....+..+++.-.+.|+-.-....+.. +.-.||+ .+ +++.+.++...--.....+++|.+.|.+....+.
T Consensus 106 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~-~~~~~~~----~~---~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 177 (399)
T PRK05122 106 AWPVLSLLLLLLGRLLLGIGESLAGTGSI-LWGIGRV----GA---LHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 177 (399)
T ss_pred ccchhHHHHHHHHHHHHHhhHHhhcchHH-HHHHhhc----Ch---hhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence 00001111122121233333222222211 1112332 12 3456666655444566778999999999887676
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHH
Q 012017 175 QASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKI 254 (473)
Q Consensus 175 ~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (473)
+....+.... +++. .+ .....|+-. +. ++ + .. ++++
T Consensus 178 ~~~~~~~~~~---~~~~-~~----~~~~~~~~~-----------~~--~~--~---------------~~----~~~~-- 213 (399)
T PRK05122 178 AGLGLLIMLL---ALLG-LL----LARPRPAVP-----------PV--KG--E---------------RL----PFRR-- 213 (399)
T ss_pred HHHHHHHHHH---HHHH-HH----HHhcCCCCC-----------CC--Cc--c---------------ch----hHHH--
Confidence 5433222221 1111 01 111112100 00 00 0 00 0000
Q ss_pred HhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh
Q 012017 255 IDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSR 334 (473)
Q Consensus 255 ~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r 334 (473)
.++.++.... .+.+..+..-+.......|++++|++.. +..-+.-.+.++.+.+...++.+|
T Consensus 214 -----------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r 275 (399)
T PRK05122 214 -----------VLGRVWPYGM-----GLALASIGFGTIATFITLYYAARGWDGA--ALALTLFGVAFVGARLLFGNLINR 275 (399)
T ss_pred -----------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcccccc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111111 1111111111112234456777777433 333344555667788889999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHH
Q 012017 335 ISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQ 413 (473)
Q Consensus 335 iGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~ 413 (473)
+|..|.-..+.......+... . ..++... -...++.|+..+ ..-.+....++|.+|+++||++.|+-+..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~G~~~~-----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 347 (399)
T PRK05122 276 LGGLRVAIVSLLVEILGLLLL--W-LAPSPWMALIGAALTGFGFS-----LVFPALGVEAVKRVPPQNRGAALGAYSVFL 347 (399)
T ss_pred hccHHHHHHHHHHHHHHHHHH--H-HhccHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 998776655554433322111 1 1222111 111223333222 222334456677899999999999999888
Q ss_pred HHHHH-HHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhCCcc
Q 012017 414 STMDL-MAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLF 463 (473)
Q Consensus 414 slf~l-l~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~~~~rghl~ 463 (473)
++... ...+.+.+...- .+.+...+... +...+.....+.+++++|-+
T Consensus 348 ~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 348 DLSLGITGPLAGLVASWF-GYPSIFLAAAL-AALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHc-CHHHHHHHHHH-HHHHHHHHHHHhcccccccC
Confidence 87753 455556555321 12222223322 23333455556677777754
No 17
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.95 E-value=2.5e-06 Score=88.39 Aligned_cols=265 Identities=13% Similarity=0.037 Sum_probs=144.0
Q ss_pred hhhhhhhhhhhhhHhhhhhhhhHHHHHHhhh-hhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCC
Q 012017 141 EALTKMNSIIRRIDLTCKLLAPAITGFIISF-VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMP 219 (473)
Q Consensus 141 ~~La~~Na~mRRIDL~ckllaPl~vG~l~t~-~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~ 219 (473)
+++.+.|+...-=--...+++|.+.+.+.+. .+.+....+.++..++..... ...|+-. ++ +
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~--------~~~~e~~----~~-~---- 188 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT--------LWAPEPE----VP-A---- 188 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH--------HhcCCCc----cc-c----
Confidence 3467777776644456788888888888774 367766665555444433221 1122100 00 0
Q ss_pred cccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcC-CchhHHH
Q 012017 220 IDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTA 298 (473)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLs-f~~lmta 298 (473)
++ + + ... ++ ..+++++.+|+|.+..-+...++|..... +.....-
T Consensus 189 ---~~--~------------~--~~~------~~---------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 234 (402)
T PRK11902 189 ---RP--P------------R--SLG------EA---------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT 234 (402)
T ss_pred ---cc--c------------c--hhH------HH---------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 00 0 0 000 00 02456778888888776666555543222 2223334
Q ss_pred HHHh-cCCCchHHHHHhH-HHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHhhh
Q 012017 299 TLEW-EGIPAYIIGIARG-ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY-MLMVGV 375 (473)
Q Consensus 299 Yl~~-~G~s~~~ig~~Rg-~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~-~l~~gi 375 (473)
|+.+ .|+++..+|..-+ .+.+.++.|+++.+++.+|+|..|.-.++...+..+........+.+.+.+... ..+..-
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 4544 7999999999875 466778999999999999999888766665555443222211112222211111 111111
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHH-HHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFH 454 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~l-l~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~ 454 (473)
...=++.-..-.....+.|+.+|.++++..++ .+++-.+ ...+.+.+. ++|++.......++.....+. .
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~G~l~---~~~G~~~~f~~~~~~~~~~~~--~ 385 (402)
T PRK11902 315 LCGGMGTAAFVALLMALCNRSFSATQYALLSA----LASVGRVYVGPTSGYLV---EAYGWPGFYLMTVVIALPGLA--L 385 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH----HHHHHHHHHHHHHHHHH---HHhChHHHHHHHHHHHHHHHH--H
Confidence 23333445566777889999999887654333 3333332 334555555 567877655555544433222 2
Q ss_pred HHHhhCCccCh
Q 012017 455 LYRIRKHLFHF 465 (473)
Q Consensus 455 ~~~~rghl~h~ 465 (473)
.+|.++|+=|-
T Consensus 386 ~~~~~~~~~~~ 396 (402)
T PRK11902 386 LWLMRGTIGRY 396 (402)
T ss_pred HHHHhhhcccc
Confidence 24555665444
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.92 E-value=1.2e-06 Score=90.24 Aligned_cols=149 Identities=14% Similarity=0.044 Sum_probs=90.7
Q ss_pred hHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHh
Q 012017 295 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAAYMLMV 373 (473)
Q Consensus 295 lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~s~~~l~~ 373 (473)
.+..|+++.|+++...|..-+...+.++.+.+...++.+|+|..|.=.........++. .....++.. .....++.
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLA---ALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---HHHhcCcHHHHHHHHHHH
Confidence 35568888999999999999999999999999999999999977654433322222211 111122211 11112222
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhccCCCcchhHHHHHHHHHHHHHHHH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIIISNPQDFWKLILISVIVVTLAAILY 451 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y 451 (473)
|... . +..-...-+.||.+|+++||+..|+.++..++...+. .+.+.+............+...+...+..+.
T Consensus 319 g~~~--~---~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 319 GLFV--V---GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHH--H---hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 2211 1 1222334577899999999999999999998877554 4445555443344444444444444444333
No 19
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=1.9e-06 Score=89.86 Aligned_cols=320 Identities=10% Similarity=0.072 Sum_probs=163.5
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHH
Q 012017 23 YMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFV 102 (473)
Q Consensus 23 ~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~ 102 (473)
++.+-..-+..-.+..-..-.+..+++++..|++.||..|.+++..+.+..-++. . .+.. . +++..+.
T Consensus 36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~----~---~~~~-~----~~~~~l~ 103 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF----A---TMAI-A----HEPWLLW 103 (400)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH----H---HHHH-h----ccHHHHH
Confidence 3333333344444444444456667778999999999999998776655433321 1 1111 1 1222211
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHH
Q 012017 103 LLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLA 182 (473)
Q Consensus 103 ~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~ 182 (473)
+.. .+.+.-+.+...+.. +.-.||+ +|+++.+.++..+-.+.....++|.+.|.+. ..+++....+.+
T Consensus 104 ~~~---~l~g~~~~~~~~~~~-~~~~~~~-------~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~ 171 (400)
T PRK11646 104 LSC---ILSGLGGTLFDPPRT-ALVIKLI-------RPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGA 171 (400)
T ss_pred HHH---HHHHHHHHHHHHHHH-HHHHHhc-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 111 122322222222211 1123442 2256889999999999999999999999998 456665555555
Q ss_pred HHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccc
Q 012017 183 IWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAP 262 (473)
Q Consensus 183 ~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 262 (473)
...++..+...+. .|+-. ++ + ++ .+
T Consensus 172 ~~~~~~~i~~~~~-------~~~~~----~~-----~---~~------------------~~------------------ 196 (400)
T PRK11646 172 VLFVLAAAFNAWL-------LPAYK----LS-----T---VR------------------TP------------------ 196 (400)
T ss_pred HHHHHHHHHHHHh-------CCccc----cc-----c---cc------------------hh------------------
Confidence 5444443332221 12100 00 0 00 00
Q ss_pred cccchhhhhhccchhhhHHHHH-HHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhH-HhhHHHHHhhhhhhhH
Q 012017 263 CVGAWQVYLKQEVVLPGVSLAL-LFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAA-TILYPILQSRISTLRT 340 (473)
Q Consensus 263 ~~~~w~~Y~~q~vflaslalal-LY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~g-T~~~p~l~~riGlvrt 340 (473)
..++|+..+++|.++....... +++...+.-..+-.|+++.|.++..+|.+-++.++.++.+ .....+..+|.+..|.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 276 (400)
T PRK11646 197 VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR 276 (400)
T ss_pred hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 0124555566665543222222 2211111111233467777778888888866655555533 3445556666665443
Q ss_pred HHHHHHHHHHHHHHHHHHh-hccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH
Q 012017 341 GLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 341 Gl~~l~~Q~~~L~~~v~s~-~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
-..+.... .++.... +.+. . ..+....++.=+|.-..+.....++|+.+|+++||++.|..+...++...+
T Consensus 277 ~~~~~~~~----~~~~~~l~~~~~--~--~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i 348 (400)
T PRK11646 277 LMAGLLIM----SLSMFPIGMVSN--L--QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI 348 (400)
T ss_pred HHHHHHHH----HHHHHHHHHhhh--H--HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh
Confidence 22222211 1111111 1121 1 111112222223444555566788999999999999999988888777654
Q ss_pred H-HHhHHhccC
Q 012017 420 A-YTMGIIISN 429 (473)
Q Consensus 420 ~-~v~~Ii~~~ 429 (473)
- .+.+.+...
T Consensus 349 g~~l~G~l~~~ 359 (400)
T PRK11646 349 GYIGGGWLFDL 359 (400)
T ss_pred cccchHHHHHH
Confidence 4 444555544
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.92 E-value=2.1e-07 Score=92.89 Aligned_cols=344 Identities=12% Similarity=0.089 Sum_probs=171.0
Q ss_pred chhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhccc
Q 012017 14 RMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSL 93 (473)
Q Consensus 14 RmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~ 93 (473)
..+.++.+.+..+ +.-+---.+...-.-.+..++..+..|.+.||..|.+.+..+.+..-++ +. ++.. .
T Consensus 12 ~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~---~~~~-~-- 80 (379)
T TIGR00881 12 KNFALAMPYLVEE-IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIV----NL---FFGF-S-- 80 (379)
T ss_pred HhhhhhhHHHHHH-hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHH----HH---HHHH-h--
Confidence 3456666654443 3434444555555666777788999999999999998876654432222 11 1111 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhh-HHHHHHhhhh
Q 012017 94 KSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAP-AITGFIISFV 172 (473)
Q Consensus 94 ~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaP-l~vG~l~t~~ 172 (473)
+++..+.+... +.+....... ....++-.||. .+ ++..+.++...-......+++| ++.+.+....
T Consensus 81 --~~~~~~~~~~~---~~g~~~~~~~-~~~~~~~~~~~----~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00881 81 --TSLWVMAALWA---LNGIFQGMGW-PPCGRTVTKWF----SR---SERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY 147 (379)
T ss_pred --hhHHHHHHHHH---HHHhhccccC-CchHHHHHHhc----CH---hhheeeEeehhccchhHHHHHHHHHHHHHHhcC
Confidence 12222222111 1121111111 11122223443 11 3456666666666777888888 5656555555
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHH
Q 012017 173 SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRW 252 (473)
Q Consensus 173 s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (473)
+.+....+.++..++...+-.+ . .|+-.++++.+ +.+.+. +++.+ ++.+..+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~-----~~~~~~-~~~~~--------~~~~~~~~~~---- 202 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICFL----L---LRDSPQSCGLP-----PAEEMP-NEEPD--------GDAEKKEEEL---- 202 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHhe----e---eCCCccccccC-----ccccCc-ccccc--------cccccccccc----
Confidence 5555444433333332222111 1 12111100000 000000 00000 0000000000
Q ss_pred HHHhhhcccccccchhhhhhccch-hhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHH
Q 012017 253 KIIDWISNAPCVGAWQVYLKQEVV-LPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPI 330 (473)
Q Consensus 253 ~~~~~l~~~~~~~~w~~Y~~q~vf-laslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~ 330 (473)
......++..+++|.+ ...++..+.|+...++......|+.+ .|+++...|..-+...+.++.+.++.++
T Consensus 203 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 274 (379)
T TIGR00881 203 --------TKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGW 274 (379)
T ss_pred --------cchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHH
Confidence 0001234445566644 44555566666555666677788876 5999999999999999999999999999
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-cc-hhHH--HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchh
Q 012017 331 LQSRISTLRTGLWSIWSQWFCLLICVASIWI-HN-SLVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVG 406 (473)
Q Consensus 331 l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~-~~-~~~s--~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~ 406 (473)
+.+|.+.-|........-.. ...++...+. +. +... ...++.|. ...+.-.....+.+|.+|+++||+..
T Consensus 275 l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~g~~~ 348 (379)
T TIGR00881 275 LSDKLFNGRRGPLAVFFMAL-IIVSLLVYWLNPAANPLMDLICLFALGF-----LVYGPQMLIGVIASELAPKKAAGTAA 348 (379)
T ss_pred HHHHHcCCcchHHHHHHHHH-HHHHHHHHhcCcchhHHHHHHHHHHHHH-----HHhhhhHHHHHHHHHhcCcchhHHHH
Confidence 99886543332222221111 1122222222 11 1111 12222222 12233333445778999999999999
Q ss_pred hhhHHHHHHHHHHH
Q 012017 407 GVQNSLQSTMDLMA 420 (473)
Q Consensus 407 gvq~Sl~slf~ll~ 420 (473)
|+.++.+++...+.
T Consensus 349 g~~~~~~~~g~~~~ 362 (379)
T TIGR00881 349 GFVGFFAYLGGILA 362 (379)
T ss_pred HHHHHhhhhhhhhh
Confidence 99998888776544
No 21
>PRK11043 putative transporter; Provisional
Probab=98.91 E-value=7.3e-06 Score=84.46 Aligned_cols=302 Identities=16% Similarity=0.101 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 012017 36 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVG 115 (473)
Q Consensus 36 svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~ 115 (473)
+...-.-.+...+.++..|.+.||..|.+.+..+.+.--+ ++.. .. .. +++..+.+... +.|.-.
T Consensus 44 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~~~~---~~-~~----~~~~~l~~~~~---l~G~~~ 108 (401)
T PRK11043 44 SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFAL----GSLG---ML-WV----ESAAQLLVLRF---VQAVGV 108 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHH----HHHH---HH-Hh----cCHHHHHHHHH---HHHhhh
Confidence 3344444556677889999999999999887655432221 1111 11 11 12222221111 111111
Q ss_pred HHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHH
Q 012017 116 VISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWL 195 (473)
Q Consensus 116 ~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 195 (473)
.... ....+.-.||.. + ++..+.++..-.+-.....++|.+.|.+....+.+.......+..++..++-++
T Consensus 109 ~~~~-~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~- 179 (401)
T PRK11043 109 CSAA-VIWQALVIDRYP----A---QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR- 179 (401)
T ss_pred HHHH-HHHHHHHHHhcC----c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH-
Confidence 1111 112233455531 2 345666666666777888899999999988778777666666665554433111
Q ss_pred HHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccc
Q 012017 196 FMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEV 275 (473)
Q Consensus 196 l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~v 275 (473)
.|+ +++++ ++ + .. ..+|++-+++|.
T Consensus 180 -------~~~---~~~~~---------~~----------------~-~~-------------------~~~~~~~~~~~~ 204 (401)
T PRK11043 180 -------LKP---SKKAR---------KQ----------------S-QD-------------------ALTFKQLLKSKT 204 (401)
T ss_pred -------cCC---CCCcc---------cc----------------c-hH-------------------HHHHHHHHcChh
Confidence 110 00000 00 0 00 011222223332
Q ss_pred hhhhH-H---HHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHH
Q 012017 276 VLPGV-S---LALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFC 351 (473)
Q Consensus 276 flasl-a---lalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~ 351 (473)
++..+ . ....+++ +.....-|++..|+++...|..-....+..+.|.+...++.+|+|..|.-.+.+.....+
T Consensus 205 ~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~ 281 (401)
T PRK11043 205 YLGNVLIFAACSAAFFA---WLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVS 281 (401)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 22111 1 1111222 222334567778999999998877777788889999999999999776544444444444
Q ss_pred HHHHHH-HhhccchhHHHHH--HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHH
Q 012017 352 LLICVA-SIWIHNSLVAAYM--LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGI 425 (473)
Q Consensus 352 L~~~v~-s~~~~~~~~s~~~--l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~I 425 (473)
...... ....+........ .+.|. +....-........+..|+ +||+..|+.+++++..-...-..+=
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g 352 (401)
T PRK11043 282 VIAIWLASLLSHPSLVPLLIPFCVMAA-----ANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVS 352 (401)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 332221 1111111111111 11111 1122222223333344554 7999999999998877554444433
No 22
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.88 E-value=1.8e-06 Score=84.91 Aligned_cols=320 Identities=18% Similarity=0.162 Sum_probs=188.9
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccc
Q 012017 15 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 94 (473)
Q Consensus 15 mweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~ 94 (473)
++....+.++.+. ..+---.+.......+..++..+..|.+.||..|.+.+..+.+..-++ ... +...
T Consensus 17 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~----~~~---~~~~---- 84 (352)
T cd06174 17 LLSPALPLLAEDL-GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG----SLL---LAFA---- 84 (352)
T ss_pred hhHhhHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH----HHH---HHHh----
Confidence 4555666666654 334455677777778888999999999999999999766665443332 111 1110
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhH
Q 012017 95 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 174 (473)
Q Consensus 95 ~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~ 174 (473)
+++..+.+.. .+.+....... ...-+.-.||. ++ +++.+.++...-.......++|.+.+.+.+..+.
T Consensus 85 -~~~~~~~~~~---~l~g~~~~~~~-~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 85 -SSLWLLLVGR---FLLGLGGGALY-PAAAALIAEWF----PP---KERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152 (352)
T ss_pred -ccHHHHHHHH---HHHHccccccc-HhHHHHHHHhC----Cc---cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1222222211 12222222111 12223333442 22 3568888888889999999999999999887666
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHH
Q 012017 175 QASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKI 254 (473)
Q Consensus 175 ~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (473)
+....+.+...+++...-+++. |.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-------~~------------------------------------------------- 176 (352)
T cd06174 153 RWLFLILAILGLLLALLLLFLL-------RL------------------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HH-------------------------------------------------
Confidence 6665555555555444432221 00
Q ss_pred HhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhc-CCCchHHHHHhHHHHHHHhhHHhhHHHHHh
Q 012017 255 IDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWE-GIPAYIIGIARGISATIGIAATILYPILQS 333 (473)
Q Consensus 255 ~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ 333 (473)
.....+...+.++..-.+...+..|.++. |.++...|..-+...+.++.+.+..+++.+
T Consensus 177 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 236 (352)
T cd06174 177 --------------------LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSD 236 (352)
T ss_pred --------------------HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111111222333456677765 899999999999999999999999999999
Q ss_pred hhhhhh-HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHH
Q 012017 334 RISTLR-TGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSL 412 (473)
Q Consensus 334 riGlvr-tGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl 412 (473)
|+|..+ .-..+.....++.. ...+.+. ...+..+..+--++--........++||.+|+++|++..|+.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~---~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 237 RLGRRRLLLLIGLLLAALGLL---LLALAPS----LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred HHHhhhHHHHHHHHHHHHHHH---HHHHhcc----HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 999876 43333333222221 1112221 122222333333444455667888999999999999999999999
Q ss_pred HHHHHHHHHHhHHhccCCCcchhHHHHHH
Q 012017 413 QSTMDLMAYTMGIIISNPQDFWKLILISV 441 (473)
Q Consensus 413 ~slf~ll~~v~~Ii~~~P~~F~~lv~iS~ 441 (473)
+++...+...+.-..-+...+.+...+..
T Consensus 310 ~~~~~~i~~~i~g~l~~~~~~~~~~~~~~ 338 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTGGYGGVFLILA 338 (352)
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 99988776655544333333444333333
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.84 E-value=4.4e-06 Score=86.02 Aligned_cols=336 Identities=11% Similarity=0.097 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 012017 36 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVG 115 (473)
Q Consensus 36 svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~ 115 (473)
+...-...+..++..+..|.+.||..|.+++..+.+..-++.. ++.. . +++..+.+.-. +.|.-+
T Consensus 41 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-------l~~~-~----~~~~~l~~~r~---l~G~~~ 105 (382)
T PRK10091 41 GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA-------MFTL-S----SSYLMLAIGRL---VSGFPH 105 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH-------HHHH-h----CcHHHHHHHHH---HHHhhh
Confidence 3333444666778889999999999999998776554332211 1111 1 12222222111 222221
Q ss_pred HHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHH
Q 012017 116 VISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWL 195 (473)
Q Consensus 116 ~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 195 (473)
..........+ .||. ++ ++..+.++.+.-.=.....++|.+.|.+.+..+++....+.+...++...+-
T Consensus 106 ~~~~~~~~~~~-~~~~----~~---~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~--- 174 (382)
T PRK10091 106 GAFFGVGAIVL-SKII----KP---GKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI--- 174 (382)
T ss_pred HHHHHHHHHHH-HHhC----Ch---HHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH---
Confidence 11111222223 3442 22 2344555544433345567788888988877777777666666555544321
Q ss_pred HHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccc
Q 012017 196 FMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEV 275 (473)
Q Consensus 196 l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~v 275 (473)
+...|+-++ + ++ . ..+ +. ++ .+++|.
T Consensus 175 ----~~~lp~~~~----~---------~~--~---------------~~~--~~-----------------~~-~~~~~~ 200 (382)
T PRK10091 175 ----YFWVPDIRD----E---------AK--G---------------GLR--EQ-----------------FH-FLRSPA 200 (382)
T ss_pred ----HHhCCCCCc----c---------cc--c---------------CHH--HH-----------------HH-HhcChH
Confidence 122343110 0 00 0 000 00 00 111121
Q ss_pred hhhhH-HHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 012017 276 VLPGV-SLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLL 353 (473)
Q Consensus 276 flasl-alalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~ 353 (473)
+..-+ ...+-+.....+......|+.+ .|+++...|.+-.+..+.++.+.+..+++.+|+|..|.-.++...+.+.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHH
Confidence 11111 1111122222222223456654 699999999999999999999999999999999988776666554433221
Q ss_pred HHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhh-hhhccccCCCcccchhhhhHHHHHHHH-HHHHHhHHhccCCC
Q 012017 354 ICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI-QQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIISNPQ 431 (473)
Q Consensus 354 ~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~-qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll~~v~~Ii~~~P~ 431 (473)
. .....+... ..+....+.-.|+.+.....+ -..|+..|+++++...+ +. ..++-. +-..+.+.++-.-.
T Consensus 281 ~--~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~~Gp~~~G~l~~~~~ 352 (382)
T PRK10091 281 M--LFFFGGMKT----ASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG-QI-AFNLGSAIGAYCGGMMLTLGL 352 (382)
T ss_pred H--HHHHHhhHH----HHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH-HH-HHHHHHHHHHHHhHHHHHccc
Confidence 1 111112111 112222233345555554332 35666666666665433 22 233333 33445556664434
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012017 432 DFWKLILISVIVVTLAAILYTFHLYRIR 459 (473)
Q Consensus 432 ~F~~lv~iS~~~V~~a~~~y~~~~~~~r 459 (473)
.+.....++...+..+......+.+|+|
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PRK10091 353 AYNYVALPAALLSFAAMSSLLLYGRYKR 380 (382)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 4555555555555555555555655544
No 24
>PRK03545 putative arabinose transporter; Provisional
Probab=98.83 E-value=6e-06 Score=85.01 Aligned_cols=298 Identities=13% Similarity=0.120 Sum_probs=154.8
Q ss_pred HHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHhhhh
Q 012017 44 ASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGV-ISTLAG 122 (473)
Q Consensus 44 ~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~-Las~a~ 122 (473)
+...++.+..|.+.||..|.|++..+.+. .++++.. +.. . +++..+.+... +.|...- ......
T Consensus 55 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~----~~~~~~~---~~~-~----~~~~~l~~~r~---~~G~~~~~~~~~~~ 119 (390)
T PRK03545 55 WVVALMSLPLMLLTSNVERRKLLIGLFVL----FIASHVL---SAL-A----WNFTVLLISRI---GIAFAHAIFWSITA 119 (390)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHH----HHHHHHH---HHH-h----ccHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 34456677789999999999987666432 1212211 111 1 12222222211 1121111 111222
Q ss_pred hhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 012017 123 TILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKG 202 (473)
Q Consensus 123 ~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~ 202 (473)
++. -||. .+ +++.+.++.+.--.-....++|.+.+.+.+..+++......++..++....-+ ..
T Consensus 120 ~~i--~~~~----~~---~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~-------~~ 183 (390)
T PRK03545 120 SLA--IRVA----PA---GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI-------KL 183 (390)
T ss_pred HHH--HHhC----Ch---hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH-------Hh
Confidence 222 2332 22 45788888888888899999999999998877887776665555444332221 11
Q ss_pred ccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHH
Q 012017 203 IPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSL 282 (473)
Q Consensus 203 vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslal 282 (473)
.|+.. + ++ + .+ .+++++.+++|.+...+..
T Consensus 184 ~~~~~-----~---------~~--~---------------~~-------------------~~~~~~~~~~~~~~~~~~~ 213 (390)
T PRK03545 184 LPLLP-----S---------EH--S---------------GS-------------------LKSLPLLFRRPALVSLYLL 213 (390)
T ss_pred CCCCC-----C---------CC--c---------------ch-------------------HHHHHHHHhCcHHHHHHHH
Confidence 23110 0 00 0 00 0112334555544433333
Q ss_pred HHHHhh-hcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH-h
Q 012017 283 ALLFFT-VLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-I 359 (473)
Q Consensus 283 alLY~T-VLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s-~ 359 (473)
.+++.. ..+....+..|+.+ .|+|+...|..-..-.+.++.+++..+++.+|.|. |.-.+..... ..+... .
T Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~-~~~~~~~~~~----~~~~~~l~ 288 (390)
T PRK03545 214 TVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPS-GFLLIAIALL----LVCLLLLL 288 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHHH----HHHHHHHH
Confidence 222221 11222345567776 59999999999888888999999999999999984 3222222111 111111 1
Q ss_pred hccchhH--HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHH-HHHHhHHhccCCCcchhH
Q 012017 360 WIHNSLV--AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGIIISNPQDFWKL 436 (473)
Q Consensus 360 ~~~~~~~--s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~l-l~~v~~Ii~~~P~~F~~l 436 (473)
..+.+.. ....++.|+ |.-.+....+..+|+..| ++||++.|..+++.++--. -..+.+.+. +++++-
T Consensus 289 ~~~~~~~~~~~~~~l~g~-----~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~---~~~g~~ 359 (390)
T PRK03545 289 PAANSEWHLSVLSIFWGI-----AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVS---LHLGLS 359 (390)
T ss_pred HHhchHHHHHHHHHHHHH-----HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccChh
Confidence 1111111 112222232 233344445566777666 4889998988887665332 334444444 455553
No 25
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.81 E-value=1.1e-05 Score=82.83 Aligned_cols=306 Identities=14% Similarity=0.132 Sum_probs=148.7
Q ss_pred HHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH-Hh
Q 012017 41 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVI-ST 119 (473)
Q Consensus 41 ~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~L-as 119 (473)
.-.+..+++.+..|.+.||..|.+.+..+.+..-++ .. . ... . +++..+.+... +.+..... ..
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~----~~--~-~~~-~----~~~~~l~~~~~---~~g~~~~~~~~ 115 (394)
T PRK11652 51 AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG----TL--V-ALF-A----HSLTVLIAASA---IQGLGTGVGGV 115 (394)
T ss_pred HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH--H-HHH-H----ccHHHHHHHHH---HHHhhhhHHHH
Confidence 344556677889999999999999876654432221 11 1 111 1 12222222111 12211111 11
Q ss_pred hhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 012017 120 LAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSV 199 (473)
Q Consensus 120 ~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 199 (473)
.+. ..-+|+. . + +++.+.|+...---....+++|.+.|.+.+..+.+....+.+...++....-++
T Consensus 116 ~~~--~~~~~~~----~--~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~----- 181 (394)
T PRK11652 116 MAR--TLPRDLY----E--G-TQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMAR----- 181 (394)
T ss_pred HHH--HHHHHhc----C--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHH-----
Confidence 122 2224442 1 2 456777777766667777899999999887667766655555444432222111
Q ss_pred HhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhh
Q 012017 200 YKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPG 279 (473)
Q Consensus 200 Y~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflas 279 (473)
..|+-. + . ++ + +.+ . .++++.-+++|.+..-
T Consensus 182 --~~~~~~-----~------~--~~--~--------------~~~-~-----------------~~~~~~~~~~~~~~~~ 212 (394)
T PRK11652 182 --WMPETR-----P------A--DA--R--------------RTR-V-----------------LASYRTLLSNRRFNCY 212 (394)
T ss_pred --hCCccC-----c------c--cc--c--------------hhH-H-----------------HHHHHHHHcChHHHHH
Confidence 123110 0 0 00 0 000 0 1223333444443333
Q ss_pred HHHHHHHhhhc-CCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012017 280 VSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA 357 (473)
Q Consensus 280 lalalLY~TVL-sf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~ 357 (473)
+...++++..+ .|......|+.+ .|+++...|..-....+..+.+.++..++.+|.| |...+++............
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (394)
T PRK11652 213 LLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWI 290 (394)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 32223332221 122223336665 6999999999888888888899999999999998 2222222221111111111
Q ss_pred HhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccC
Q 012017 358 SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISN 429 (473)
Q Consensus 358 s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~ 429 (473)
..+.... +...+..+.++.=+|.=..--..+...||.+|+ ++|+.+++.++.+++.-.+.-.++-...+
T Consensus 291 ~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 291 PGWFGVM--NVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-LAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHhccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 1111100 111111121111111111223344556777774 78999999998888776554444333433
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.80 E-value=1.3e-05 Score=82.90 Aligned_cols=314 Identities=15% Similarity=0.175 Sum_probs=153.6
Q ss_pred HHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 012017 41 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTL 120 (473)
Q Consensus 41 ~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~ 120 (473)
.-.+...+..+..|.+.||..|.+++..+...- ++++. .... . +++..+..... +.+........
T Consensus 56 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~----~~~~~---~~~~-~----~~~~~l~~~~~---l~G~~~~~~~~ 120 (406)
T PRK15402 56 AYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF----ILTCL---AILL-A----QSIEQFTLLRF---LQGIGLCFIGA 120 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH----HHHHH---HHHH-H----ccHHHHHHHHH---HHHhHhhhHHH
Confidence 334456677789999999999999876654321 11111 1111 1 12222222111 11211111111
Q ss_pred hhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 012017 121 AGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVY 200 (473)
Q Consensus 121 a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY 200 (473)
.. .+.-.|+. ++ +...+.++.+.-.-.....++|.+.|.+.+..+++....+.++...++...- +
T Consensus 121 ~~-~~~i~~~~----~~---~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~-------~ 185 (406)
T PRK15402 121 VG-YAAIQESF----EE---ADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL-------W 185 (406)
T ss_pred HH-HHHHHHHh----Ch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH-------H
Confidence 11 12223442 11 3445666666555566778999999999887777766666565555544321 1
Q ss_pred hhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhh-h
Q 012017 201 KGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLP-G 279 (473)
Q Consensus 201 ~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vfla-s 279 (473)
...|+-. +++ ++ + .+.. + ..++++.-+++|.+.. .
T Consensus 186 ~~~~~~~---~~~---------~~--~--------------~~~~-~---------------~~~~~~~~~~~~~~~~~~ 221 (406)
T PRK15402 186 RAMPETA---GRV---------GE--K--------------LSLK-E---------------LGRDYKLVLKNRRFVAGA 221 (406)
T ss_pred HhCCCCC---ccc---------cc--c--------------ccHH-H---------------HHHHHHHHHcCcHHHHHH
Confidence 1223110 000 00 0 0000 0 0123445556664433 3
Q ss_pred HHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHH-HHH
Q 012017 280 VSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLI-CVA 357 (473)
Q Consensus 280 lalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~-~v~ 357 (473)
++..+.++...++......|+.+ .|+++...|..-....+..+.|.++..++.+|.|..|.=..+...+..-+.. ...
T Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~ 301 (406)
T PRK15402 222 LALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334433333444445566654 6999999988877666777888999999999999766544444333222211 111
Q ss_pred HhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH-HHHhHHhccCCCc
Q 012017 358 SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM-AYTMGIIISNPQD 432 (473)
Q Consensus 358 s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll-~~v~~Ii~~~P~~ 432 (473)
....+.+... ++.++++-=+|.=..........|. +++++||+++++-+..+.+...+ ..+.+.+......
T Consensus 302 ~~~~~~~~~~---~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 302 TVISSHAYLW---LTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGN 373 (406)
T ss_pred HHcccccHHH---HHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCch
Confidence 1111111111 1111111111111111111222332 45689999999988888776533 3444444444443
No 27
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.79 E-value=1e-05 Score=83.40 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=104.8
Q ss_pred hhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 267 WQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 267 w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
++..+|+|.++.-+...+++... -++.....-|+++.|+++..+|..-+++++.++.+-+..+++.+|+|..|.=.++.
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~ 277 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISA 277 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHH
Confidence 45567777666655555554444 34555666789899999999999999999999999999999999999877655444
Q ss_pred HHHHHHHHHHHHHhhccchh-HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHH--HHHHHH
Q 012017 346 WSQWFCLLICVASIWIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYT 422 (473)
Q Consensus 346 ~~Q~~~L~~~v~s~~~~~~~-~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf--~ll~~v 422 (473)
......... .++ .++.. +-..-++-|+.. | .+=.+..+.+|+. |+++|+...|+.+++..-. -....+
T Consensus 278 ~~~~~~~~~--~~~-~~~~~~~~~~q~l~g~~~---~--~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 278 IACVGRWAI--IGA-IEAFPLIFLLQILHCGTF---A--VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred HHHHHHHHH--HHh-HhhHHHHHHHHHHHHHHH---H--HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333221 111 12111 111111111111 1 1223366777877 9999988777766543332 223566
Q ss_pred hHHhccCCCcchhHHHHHHHHHHHHHHHHH
Q 012017 423 MGIIISNPQDFWKLILISVIVVTLAAILYT 452 (473)
Q Consensus 423 ~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~ 452 (473)
.+.+. +.++..+....+.+...+.+..
T Consensus 349 ~G~l~---~~~g~~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 349 AGFIY---PTLGAGTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHH---HhccHHHHHHHHHHHHHHHHHH
Confidence 66666 3445555555555555554443
No 28
>PRK12382 putative transporter; Provisional
Probab=98.75 E-value=1.2e-05 Score=82.60 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=71.1
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-AAYMLMVG 374 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s~~~l~~g 374 (473)
...|+.+.|+++. +..-....+.++.+.+..+++.+|.|..|.-.++.......... ..+.++... -...++.|
T Consensus 239 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 239 VSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL---LWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH---HHHcccHHHHHHHHHHHH
Confidence 3457777777654 33334455566778889999999999887766666554443321 112232211 11122222
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH-HHHhHHhc
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM-AYTMGIII 427 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll-~~v~~Ii~ 427 (473)
+..+ ..-....-.++|..|+++||+..|+.++..++-..+ ..+.+.+.
T Consensus 314 ~~~~-----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 314 AGCS-----LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred HHHH-----hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 112233345677789999999999999988876544 44555554
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.75 E-value=1.6e-05 Score=83.99 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=87.5
Q ss_pred hhccchh-hhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHH
Q 012017 271 LKQEVVL-PGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 348 (473)
Q Consensus 271 ~~q~vfl-aslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q 348 (473)
++.|.++ ..++..+.|....++......|+++ .|++....+..-.+.++.++.+++++.++.+|++.-|-....+..
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~- 328 (452)
T PRK11273 250 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF- 328 (452)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH-
Confidence 3445443 4444455554445666678889987 699999998888888888899999999999998532221111111
Q ss_pred HHHHHHHHHHhhc-c-chhHH--HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HH-HHH
Q 012017 349 WFCLLICVASIWI-H-NSLVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LM-AYT 422 (473)
Q Consensus 349 ~~~L~~~v~s~~~-~-~~~~s--~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll-~~v 422 (473)
..+...+...++. + +.... ..++..|.... |... ...-..+|.+|+++||+.+|+.+.+.++.. +. ..+
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~---~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v 403 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIY--GPVM---LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAI 403 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHH--hHHH---HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhh
Confidence 1222222222222 1 11111 11222222110 1110 111245789999999999999998887764 32 566
Q ss_pred hHHhcc
Q 012017 423 MGIIIS 428 (473)
Q Consensus 423 ~~Ii~~ 428 (473)
.+.+..
T Consensus 404 ~g~l~~ 409 (452)
T PRK11273 404 VGYTVD 409 (452)
T ss_pred HHHHHH
Confidence 666663
No 30
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.74 E-value=4.2e-05 Score=77.30 Aligned_cols=307 Identities=13% Similarity=0.110 Sum_probs=152.0
Q ss_pred HHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHh
Q 012017 40 AVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVIST 119 (473)
Q Consensus 40 l~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las 119 (473)
-.-.+..++..+..|.+.||..|.+++..+.+..-+ ++. .+... +++..+.+... +.+.......
T Consensus 47 ~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~----~~~---~~~~~-----~~~~~~~~~~~---l~g~~~~~~~ 111 (385)
T TIGR00710 47 TLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL----SSL---GLALS-----NNIETLLVLRF---VQAFGASAGS 111 (385)
T ss_pred HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH----HHH---HHHHH-----ccHHHHHHHHH---HHHcchhHHH
Confidence 334455678889999999999999887655332111 111 11111 12222222111 2222222221
Q ss_pred hhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 012017 120 LAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSV 199 (473)
Q Consensus 120 ~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 199 (473)
.+ ..++-.||.. + +++.+.++...-.......++|.+.|.+.+..+.+....+.++..++....=++
T Consensus 112 ~~-~~~~~~~~~~----~---~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 178 (385)
T TIGR00710 112 VI-SQALVRDIYP----G---EELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF----- 178 (385)
T ss_pred HH-HHHHHHHhcC----c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----
Confidence 11 1223345532 2 457788888888889999999999999988777766655555444443322111
Q ss_pred HhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhh
Q 012017 200 YKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPG 279 (473)
Q Consensus 200 Y~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflas 279 (473)
..|+-. ++ +.++ ...+. .+.++.-+++|.+...
T Consensus 179 --~~~~~~----~~-------~~~~------------------~~~~~----------------~~~~~~~~~~~~~~~~ 211 (385)
T TIGR00710 179 --ILPETL----PY-------EARI------------------QISTY----------------FETFLLLLKSKMFWGY 211 (385)
T ss_pred --hCCCCC----CC-------cccC------------------CHHHH----------------HHHHHHHHcCchhHHH
Confidence 122110 00 0000 00000 0112222334433322
Q ss_pred -HHHHHHHhhhcCCchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012017 280 -VSLALLFFTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA 357 (473)
Q Consensus 280 -lalalLY~TVLsf~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~ 357 (473)
+...+.+....++......|+. ..|+++...|..-+...+.++.+.++.+++.+|+|..|.-.++.....+.......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222333554 57999999999999999999999999999999999877655544333332221111
Q ss_pred HhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HHHHHhH
Q 012017 358 SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMG 424 (473)
Q Consensus 358 s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll~~v~~ 424 (473)
....+.+... .+.......=+|.-..=........|..| ++||+.+++.++.++... +...+++
T Consensus 292 ~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 292 TAILGLGSWA--MIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHhccchHH--HHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 11111111112222111222233344445 689999999888877543 3334444
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.74 E-value=1.3e-05 Score=83.20 Aligned_cols=128 Identities=15% Similarity=0.189 Sum_probs=82.6
Q ss_pred hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 012017 294 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~ 373 (473)
..+-.|+.++|+++...|..-++-.+.++.|.+..+++.+|.|..+.-..++..+.... ....+.+.+......++.
T Consensus 226 ~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~l~ 302 (393)
T PRK09705 226 AWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGF---CGFIWLPLQLPVLWAMVC 302 (393)
T ss_pred HHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH---HHHHHccchHHHHHHHHH
Confidence 34567888899999999999999999999999999999999997766555544332211 112233332222223333
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhcc
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIIIS 428 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~~ 428 (473)
|+... +. +-.+....+|+..|+++||++.|+.+++.++...+. .+.+.+..
T Consensus 303 g~g~g--~~--~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~ 354 (393)
T PRK09705 303 GLGLG--GA--FPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS 354 (393)
T ss_pred HHhcc--ch--HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33221 11 223444566776677899999999999988876555 34445553
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.73 E-value=1.3e-05 Score=79.84 Aligned_cols=122 Identities=11% Similarity=0.019 Sum_probs=76.6
Q ss_pred hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-H--HHH
Q 012017 294 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-A--AYM 370 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s--~~~ 370 (473)
+....|.++.|+++...+..-.+..+.++.+++..+++.+|+|..+.-.++......++.. ..+.+.... . ...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 302 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAA---MLFIPMLNDVLFLATV 302 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH---HHHcccchhHHHHHHH
Confidence 3445577788999999998888889999999999999999999766644444333322221 112221111 0 111
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
++.|.... +.+. ...-+++|.+|+++||+..|+.++.+++...+--.+
T Consensus 303 ~~~g~~~g--~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 350 (377)
T TIGR00890 303 ALVFFTWG--GTIS---LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLI 350 (377)
T ss_pred HHHHHHhc--cchh---ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 12222111 1111 223467888999999999999999888876655443
No 33
>TIGR00895 2A0115 benzoate transport.
Probab=98.73 E-value=2.4e-06 Score=86.10 Aligned_cols=115 Identities=12% Similarity=0.093 Sum_probs=73.4
Q ss_pred HHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHhhhh
Q 012017 298 ATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAAYMLMVGVA 376 (473)
Q Consensus 298 aYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~s~~~l~~gi~ 376 (473)
-|.+..|+++...|..-+...+.++.+.++.+++.+|+|..+........-..+.. .....++.. .....++.|
T Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g-- 349 (398)
T TIGR00895 275 KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVL---VGSTLFSPTLLLLLGAIAG-- 349 (398)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH---HHHHhhCHHHHHHHHHHHH--
Confidence 44556799999999999999999999999999999999965332222221111111 111122111 112222223
Q ss_pred hhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 377 TSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 377 ~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
++.-........+++|.+|+++||+..|+.++..++...+-
T Consensus 350 ---~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 390 (398)
T TIGR00895 350 ---FFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIG 390 (398)
T ss_pred ---HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445566788999999999999999888887765543
No 34
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.71 E-value=4e-05 Score=76.94 Aligned_cols=133 Identities=14% Similarity=0.062 Sum_probs=77.4
Q ss_pred CchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012017 292 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~ 370 (473)
+...+..|.+ ..|+++...+..-....+.++.+..+..++.+|+|..|.-.........+..+.......+.+. ..
T Consensus 238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 314 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSF---TL 314 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCch---HH
Confidence 3444566774 4699999999988888899999999999999999976643322222111111111111111111 11
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHH-HHH-HHHHHhHHhc
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TMD-LMAYTMGIII 427 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~s-lf~-ll~~v~~Ii~ 427 (473)
++....+.-++.-.+--..+.+++|.+|+++|++..|+...+.+ +.. +...+.+.+.
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 12222222223333444566788999999999999988655543 333 3344455554
No 35
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.71 E-value=1.9e-05 Score=80.08 Aligned_cols=129 Identities=12% Similarity=0.154 Sum_probs=80.2
Q ss_pred CCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH--H
Q 012017 291 SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV--A 367 (473)
Q Consensus 291 sf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~--s 367 (473)
+....+..|+++ .|+++...|..-+...+.++.++++.+++.+|+|..|.=..+....... +...+..+.+.. .
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 332 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLL---IIPVFAIGANVAVLG 332 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHH---HHHHHHhCCchHHHH
Confidence 444556778775 6999999999999999999999999999999999876544443322111 111111122211 1
Q ss_pred HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH-hHHhc
Q 012017 368 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT-MGIII 427 (473)
Q Consensus 368 ~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v-~~Ii~ 427 (473)
...++.+... .|.+. .....+||.+|+++||++.|+.+.+.++...+.-. .+.+.
T Consensus 333 ~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 333 LGLFFQQMLV--QGIWG---ILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred HHHHHHHHHH--ccchh---hHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222211 12232 22346789999999999999998888876554443 33444
No 36
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.67 E-value=0.00011 Score=75.74 Aligned_cols=153 Identities=16% Similarity=0.033 Sum_probs=90.2
Q ss_pred hhhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHHhcCCCchHHHHHhHHHHH-HHhhHHhhHHHHHhhhhhhhHHHHH
Q 012017 267 WQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIPAYIIGIARGISAT-IGIAATILYPILQSRISTLRTGLWS 344 (473)
Q Consensus 267 w~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~~~G~s~~~ig~~Rg~gav-~Gl~gT~~~p~l~~riGlvrtGl~~ 344 (473)
++..+|+|.+..-+...++|.... +..+...-|+++.|+++..+|..-+...+ .++.+.+..+++.+|+|..|.-.++
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG 280 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 455677777666666666665432 23334456888999999999999988764 5668899999999999988877766
Q ss_pred HHHHHHHHHHHH--HHhhccchhHHHHH--HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 345 IWSQWFCLLICV--ASIWIHNSLVAAYM--LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 345 l~~Q~~~L~~~v--~s~~~~~~~~s~~~--l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
...+.+...... ...+...+...... .+.+... | ..+-......++...|++++|+..+..++++++-..+-
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 281 VGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT---G-ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 655532222221 11121111111111 1111100 0 11122223334444455889999999999988776554
Q ss_pred HHh
Q 012017 421 YTM 423 (473)
Q Consensus 421 ~v~ 423 (473)
-.+
T Consensus 357 ~~~ 359 (390)
T TIGR02718 357 SSI 359 (390)
T ss_pred HHH
Confidence 433
No 37
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.65 E-value=1.5e-05 Score=81.81 Aligned_cols=125 Identities=10% Similarity=-0.007 Sum_probs=74.7
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh----HHHHHH
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL----VAAYML 371 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~----~s~~~l 371 (473)
..-|+.+.|++....+..-....+.++.++++.+++.+|+|..+.-..+.....+++.......+...+. .+...+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 3445567899998888888888899999999999999999977665555444333332222111111110 011111
Q ss_pred Hhhhhhhcchhhhhh--hhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 372 MVGVATSRLGLWMFD--LSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 372 ~~gi~~SR~GLW~fD--L~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
...... .+.+++- ....-+++|..|+++||+..|+.+..+++...+.-.
T Consensus 387 ~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~ 437 (481)
T TIGR00879 387 VFILLF--IAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGF 437 (481)
T ss_pred HHHHHH--HHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 1112211 222234588899999999999999988887755443
No 38
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.63 E-value=5.9e-05 Score=79.09 Aligned_cols=292 Identities=14% Similarity=0.150 Sum_probs=142.7
Q ss_pred HHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012017 46 IALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTIL 125 (473)
Q Consensus 46 ~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~Ia 125 (473)
..++.+..|.+.||..|.+++-.+.++.-++ +. . ... .+++..+.+.-. +.|+.+-..... .-+
T Consensus 64 ~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~----~~--~-~~~-----a~~~~~l~~~r~---l~Gi~~~~~~~~-~~~ 127 (413)
T PRK15403 64 GMALQWLLGPLSDRIGRRPVLITGALIFTLA----CA--A-TLF-----TTSMTQFLIARF---IQGTSICFIATV-GYV 127 (413)
T ss_pred HHHHHHhhhHHHHHcCchHHHHHHHHHHHHH----HH--H-HHH-----cCCHHHHHHHHH---HHHHHHHHHHHH-HHH
Confidence 3455667899999999999876664422221 11 1 111 122222222211 222222221211 223
Q ss_pred hccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc
Q 012017 126 IEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPA 205 (473)
Q Consensus 126 vERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~ 205 (473)
.-+||. ++ ++..+.++.+--.-.+...++|++.|.+.++.+++....+.++..+++++.-.+ ..|+
T Consensus 128 ~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~-------~lp~ 193 (413)
T PRK15403 128 TVQEAF----GQ---TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL-------AMPE 193 (413)
T ss_pred HHHHhc----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-------hCCC
Confidence 445552 11 345666776666667889999999999988778887777767666665432211 2232
Q ss_pred hhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhh-HHHHH
Q 012017 206 LAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPG-VSLAL 284 (473)
Q Consensus 206 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflas-lalal 284 (473)
-. +++ ++ + .+... ..++|+.-+++|.+... +...+
T Consensus 194 ~~---~~~---------~~--~--------------~~~~~----------------~~~~~~~ll~~~~~~~~~l~~~~ 229 (413)
T PRK15403 194 TV---KRG---------AV--P--------------FSAKS----------------VLRDFRNVFRNRLFLTGAATLSL 229 (413)
T ss_pred Cc---ccc---------CC--C--------------CChHH----------------HHHHHHHHHcCHHHHHHHHHHHH
Confidence 11 000 00 0 00000 01233444566655543 33344
Q ss_pred HHhhhcCCchhHHHHHHhc-CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHH-HHHHHHHhhcc
Q 012017 285 LFFTVLSFGTLMTATLEWE-GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFC-LLICVASIWIH 362 (473)
Q Consensus 285 LY~TVLsf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~-L~~~v~s~~~~ 362 (473)
.+....+|....-.|+++. |+++...|..-..-...++.++.+..++.+|.+-.|.-......+... ++......+.+
T Consensus 230 ~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~ 309 (413)
T PRK15403 230 SYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWP 309 (413)
T ss_pred HHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4444444444445577765 899999888765555555666777777655443333211111122222 22222222223
Q ss_pred chhHHHHHHHhhhhhhcchhhhhhhhhh--hhhccccCCCcccchhhhhHHHHHHHH
Q 012017 363 NSLVAAYMLMVGVATSRLGLWMFDLSVI--QQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 363 ~~~~s~~~l~~gi~~SR~GLW~fDL~v~--qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
.+. ..+..++++.=+|.-..--... -+.|.++| +|+++|+.+.++...-
T Consensus 310 ~~~---~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~---~G~a~a~~~~~~~~~~ 360 (413)
T PRK15403 310 HVW---LWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP---KGTVSASLNMVILMVM 360 (413)
T ss_pred ccH---HHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC---CcHHHHHHHHHHHHHH
Confidence 221 1122233333333333322222 24555554 6999999888887663
No 39
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.59 E-value=9.2e-05 Score=77.89 Aligned_cols=379 Identities=12% Similarity=0.064 Sum_probs=172.4
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccch
Q 012017 18 FSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTN 97 (473)
Q Consensus 18 Fav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~ 97 (473)
+..+.++.+ +.-|---.+.....-.+...++++..|.+.||..|.+++..+.+. .+.+. + +.... ++
T Consensus 44 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~------~~~~~-~-~~~~~----~~ 110 (434)
T PRK11663 44 AAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA------TGIIN-I-LFGFS----SS 110 (434)
T ss_pred HhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH------HHHHH-H-HHHHH----hH
Confidence 334444443 233433445555555667788899999999999998876544321 11111 1 11111 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHH
Q 012017 98 FIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQAS 177 (473)
Q Consensus 98 ~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~ 177 (473)
+..+.+.. .+.+...-... ....++-.||. .+ ++..+..+.+--.-.....++|.+.|.+....+++..
T Consensus 111 ~~~l~~~~---~l~g~~~g~~~-~~~~~~~~~~~----~~---~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 111 LWAFALLW---VLNAFFQGWGW-PVCAKLLTAWY----SR---TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHHHHH---HHHHHHHHccc-hHHHHHHHHhC----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 22211111 11122121111 11122333553 11 3455556655555578889999999999887777766
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhh
Q 012017 178 AMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDW 257 (473)
Q Consensus 178 ~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (473)
..+.+...++..+.-.++ .++.|.-. +.++.+ +.++ +. .+ .+++ .+.+..++
T Consensus 180 f~~~~i~~~~~~~~~~~~----~~~~p~~~--~~~~~~-----~~~~--~~-~~-----~~~~--~~~~~~~~------- 231 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWR----LRDKPQAM--GLPSVG-----EWRH--DA-LE-----LAQQ--QEGAGLSR------- 231 (434)
T ss_pred HHHHHHHHHHHHHHHHHH----cCCCHhhc--CCCCcc-----cccc--cc-cc-----cchh--ccccCCCh-------
Confidence 555555444332221211 12222100 000000 0000 00 00 0000 00000000
Q ss_pred hcccccccchhh-hhhcc-chhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh
Q 012017 258 ISNAPCVGAWQV-YLKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSR 334 (473)
Q Consensus 258 l~~~~~~~~w~~-Y~~q~-vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r 334 (473)
.+.++. .+++| +++..++..+.|+.-.++...+..|++. .|+++...+..-+.-.+.++.|.++..++-+|
T Consensus 232 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr 305 (434)
T PRK11663 232 ------KEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK 305 (434)
T ss_pred ------hhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 011111 23344 3333444444444333344455678854 69999988887777778888899999999888
Q ss_pred hh-hhhHHHHHHHHHHHHHHHHHHHh-hccc-hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHH
Q 012017 335 IS-TLRTGLWSIWSQWFCLLICVASI-WIHN-SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS 411 (473)
Q Consensus 335 iG-lvrtGl~~l~~Q~~~L~~~v~s~-~~~~-~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~S 411 (473)
++ -.|....-.. ..+...+.... ..+. +......++.++...-.|.... ..-...|..|+++||+..|+.++
T Consensus 306 ~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~g~~~g~~~~ 380 (434)
T PRK11663 306 LFNGNRGPMNLIF--AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQML---IGMAAAECSHKEAAGAATGFVGL 380 (434)
T ss_pred hccCCccHHHHHH--HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHH---HHHHHHhcccHhhHHhHHHHHHH
Confidence 72 1121110000 00111111111 1121 1111111111111110111100 11245677889999999999999
Q ss_pred HHHHHHHH-HHHhHHhccCCCcchhHHH-HHHHHHHHHHHHHHHHHHHhhCCc
Q 012017 412 LQSTMDLM-AYTMGIIISNPQDFWKLIL-ISVIVVTLAAILYTFHLYRIRKHL 462 (473)
Q Consensus 412 l~slf~ll-~~v~~Ii~~~P~~F~~lv~-iS~~~V~~a~~~y~~~~~~~rghl 462 (473)
+.++-..+ ..+.+.+.. +++|... ...+.+...+.+.+....|.|.|.
T Consensus 381 ~~~~g~~~~p~~~g~l~~---~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 381 FAYLGAALSGYPLAKVLE---IWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHhcccHHHHHH---hcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 99887755 355555553 3444322 222233333334445556666664
No 40
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.58 E-value=0.00013 Score=73.56 Aligned_cols=122 Identities=20% Similarity=0.193 Sum_probs=68.8
Q ss_pred HHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHH--HHH
Q 012017 296 MTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY--MLM 372 (473)
Q Consensus 296 mtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~--~l~ 372 (473)
+..|+. ..|.++...|..-+.....++.+.+..+++.+|+|.-|.-.++...-.. +........+.+... .++
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 297 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVA----FYTGLAADNSLWALLMLQLL 297 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 445664 4699999999988888888888889999999999977654443322111 111111111111111 111
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhc
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIII 427 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~ 427 (473)
.|... |. .--......||..|+ +|++..|..+...++-..+. .+.+.+.
T Consensus 298 ~g~~~---g~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 298 NAIFI---GI--LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred HHHHH---HH--HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12211 11 111233456777766 56788888888777665543 3444444
No 41
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.54 E-value=0.00012 Score=77.44 Aligned_cols=126 Identities=10% Similarity=0.035 Sum_probs=81.7
Q ss_pred hhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc-chhHHH--H
Q 012017 294 TLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH-NSLVAA--Y 369 (473)
Q Consensus 294 ~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~-~~~~s~--~ 369 (473)
..+..|++ ..|+++..+|.+-....+.++.+.+++.++.+|+|..|.-..+......... .....+ .+.... .
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLII---PVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH---HHhhccccHHHHHHHH
Confidence 45677886 6799999999999999999999999999999999977664443332222111 111111 111111 1
Q ss_pred HHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhc
Q 012017 370 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIII 427 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~ 427 (473)
.++.+... .| .......++||.+|+++||+..|+.++..++...+. .+.+.+.
T Consensus 373 ~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~ 426 (496)
T PRK03893 373 LFFQQMLG--QG---ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIA 426 (496)
T ss_pred HHHHHHHh--cc---cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHh
Confidence 11111111 12 123445688999999999999999999999877654 4445555
No 42
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.53 E-value=0.0002 Score=74.13 Aligned_cols=123 Identities=13% Similarity=0.095 Sum_probs=70.0
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM-LM 372 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~-l~ 372 (473)
.+..|+++ .|+++...|.+-+...+.++.+.++..++.+|+|.-|.-..+...-... .....+.+++...... ++
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCF---YAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHhhHHHHHHHHHH
Confidence 45567765 5999999999888888888899999999999999776544332211111 1111122222111111 11
Q ss_pred hhhhhhcchhhhhhhh-hhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhc
Q 012017 373 VGVATSRLGLWMFDLS-VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIII 427 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~-v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~ 427 (473)
.++ .+++-.. ..-.+||..|+ +||+..|..++..++--.+. .+.+++.
T Consensus 315 ~~~------~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~ 364 (393)
T PRK15011 315 NAI------YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVA 364 (393)
T ss_pred HHH------HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111111 12345777775 59999998877777654443 3344444
No 43
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.53 E-value=6.2e-05 Score=80.83 Aligned_cols=337 Identities=11% Similarity=0.056 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 012017 35 AAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAV 114 (473)
Q Consensus 35 ~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i 114 (473)
.+.|.+. ..++.+..|++.||..|.+++..+++..-+.. . .+.. .+++..+.+.-. +.|.-
T Consensus 47 ~~~~~l~----~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~----~--~~~~------a~~~~~li~~r~---l~G~g 107 (495)
T PRK14995 47 IDIYSLV----MAGMVLPMGALGDRIGFKRLLMLGGTLFGLAS----L--AAAF------SPTASWLIATRA---LLAIG 107 (495)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH----H--HHHH------cCCHHHHHHHHH---HHHHH
Confidence 3445444 34455677999999999999877766443331 1 1111 122333222211 12222
Q ss_pred HHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHH
Q 012017 115 GVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYW 194 (473)
Q Consensus 115 ~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 194 (473)
......+....+.+++. ++ +++.+.++.+.-.-.....++|.+.|.+.++.+++....+.....++....-++
T Consensus 108 ~~~~~~~~~~~l~~~~~------~~-~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 108 AAMIVPATLAGIRATFT------EE-KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHcC------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 22111122223334331 22 567888899988899999999999999999888776655544444443332111
Q ss_pred HHHHHHhhccchhhchhhhhccCCCcccccccC-C------ccccccccccccchhHHHHH-------HHHHHHHhhhcc
Q 012017 195 LFMSVYKGIPALAESSQRRIRRSMPIDMEQSTS-M------PRERESLLSHDENNAELAEK-------RWRWKIIDWISN 260 (473)
Q Consensus 195 ~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~ 260 (473)
..|+=. +++. ++.|....-- . .....+ ...+...+....- .......++.+.
T Consensus 181 -------~l~~~~---~~~~---~~~d~~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~ 246 (495)
T PRK14995 181 -------YVPRQA---GRRD---QPLNLGHALMLIVAILLLVYSAKT-ALKGFLSLWVTSLTLLTGALLLGLFIRTQLAA 246 (495)
T ss_pred -------hCCCCC---CCCC---CCCChHhHHHHHHHHHHHHHHHHh-ccccCCchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 223211 0000 0001000000 0 000000 0000000000000 000000111111
Q ss_pred cccccchhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh
Q 012017 261 APCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTL 338 (473)
Q Consensus 261 ~~~~~~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv 338 (473)
..+.-+++ -+++|.+..+....+++... .++.....-|++. +|+++...|..-..-.+....+..+.+++.+|+|.-
T Consensus 247 ~~p~~~~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~ 325 (495)
T PRK14995 247 SRPMIDMR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR 325 (495)
T ss_pred CCCCcCHH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 11223344 46778887776666555443 3555556668776 799999999999988888889999999999999974
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH
Q 012017 339 RTGLWSIWSQWFCLLICVASIWIH-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 339 rtGl~~l~~Q~~~L~~~v~s~~~~-~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
+.-..+.......+ ........ .+... .....++.=+|.=..-...+...|+.+|++++|..+|+.+..+++-.
T Consensus 326 ~~~~~g~~~~~~~~--~~l~~~~~~~~~~~---~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 326 LVATGGMALSALSF--YGLAMTDFSTQQWQ---AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HHHHHHHHHHHHHH--HHHHHhcCCCchHH---HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 43222332222111 11111111 11111 11223333334333444566788999999999999999888877764
No 44
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.53 E-value=0.00021 Score=74.33 Aligned_cols=297 Identities=12% Similarity=0.125 Sum_probs=152.7
Q ss_pred HHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH-h
Q 012017 41 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVIS-T 119 (473)
Q Consensus 41 ~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~La-s 119 (473)
+-.....+.++..|.+.||..|.+.+..+.+..-++ +.. ..+. ++...+.++-. +.|...... .
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~~--~~~~------~~~~~l~~~r~---l~G~~~g~~~~ 127 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CLL--VSFA------NSFSLLLIGRA---CLGLALGGFWA 127 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HHH--HHHH------ChHHHHHHHHH---HHHHhhHHHHH
Confidence 445666778899999999999999987777654332 111 1111 12222222211 112222111 1
Q ss_pred hhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 012017 120 LAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSV 199 (473)
Q Consensus 120 ~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 199 (473)
.+.. +-.||+ ++ +++.+.|+.+.-.=-...+++|.+.+.+....+++....+.+....+.. .+ +
T Consensus 128 ~~~~--~i~~~~----~~---~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~---l~----~ 191 (394)
T PRK10213 128 MSAS--LTMRLV----PP---RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI---FW----I 191 (394)
T ss_pred HHHH--HHHHHc----CH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH---HH----H
Confidence 1222 224664 22 4567777777666677889999999999887787776655554333221 11 2
Q ss_pred HhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhh
Q 012017 200 YKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPG 279 (473)
Q Consensus 200 Y~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflas 279 (473)
+...|+.. + +.++ .. ++++.-+++|.++..
T Consensus 192 ~~~~p~~~-----~-------~~~~------------------~~--------------------~~~~~~l~~~~~~~~ 221 (394)
T PRK10213 192 IKSLPSLP-----G-------EPSH------------------QK--------------------QNTFRLLQRPGVMAG 221 (394)
T ss_pred HHHCCCCC-----c-------cccc------------------ch--------------------hHHHHHhcCHHHHHH
Confidence 22334210 0 0000 00 011122344544433
Q ss_pred H-HHHHHHhhhcCCch-hHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012017 280 V-SLALLFFTVLSFGT-LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA 357 (473)
Q Consensus 280 l-alalLY~TVLsf~~-lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~ 357 (473)
+ ...+.+....++.. ...-|.+..|+++..+|..-....+.++.++++..++.+|.+ .+.-.+.......+ .++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~--~~~l 298 (394)
T PRK10213 222 MIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVS--ALVL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHH--HHHH
Confidence 2 22233332222222 123466667999999999888888888999999999999843 22222222111111 1111
Q ss_pred Hhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HHHHHhHHhc
Q 012017 358 SIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 427 (473)
Q Consensus 358 s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll~~v~~Ii~ 427 (473)
..+.+.. ......++.| +|--.+-.+-+..+|+.+|+ +++..++...+..++-. +-..+.+.++
T Consensus 299 ~~~~~~~~~~~~~~~l~G-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~ 364 (394)
T PRK10213 299 TLWGSDKIVATGVAIIWG-----LTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYAL 364 (394)
T ss_pred HHHhhhHHHHHHHHHHHH-----HHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222211 1111122222 23334445555678998974 56778887777766554 4445555665
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.51 E-value=5.7e-05 Score=79.35 Aligned_cols=356 Identities=12% Similarity=0.049 Sum_probs=172.8
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccc
Q 012017 17 EFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKST 96 (473)
Q Consensus 17 eFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~ 96 (473)
..+.|.+..++.. +.--.+.....-.+..++..+..|++.||..|.+.+..+.+..-++ +. . +. . .+
T Consensus 22 ~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~-~~-~----~~ 88 (485)
T TIGR00711 22 NVAIPTIAGDLGS-SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG----SL--L-CG-V----AP 88 (485)
T ss_pred HHHHHHHHHhcCC-ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH----HH--H-Hh-C----cC
Confidence 3455555555432 3333444445556777788899999999999999876665433222 11 1 11 1 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHH
Q 012017 97 NFIAFVLLVILTNISGAVGVI-STLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQ 175 (473)
Q Consensus 97 ~~~~~~~l~~l~~~~~~i~~L-as~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~ 175 (473)
++..+.+... +.|..... ..... +.-.||. +|+...+.++...-.-.....++|.+.|.+.+..+.+
T Consensus 89 ~~~~l~~~~~---~~G~~~~~~~~~~~--~~i~~~~-------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 89 NLELMIIFRV---IQGFGGGPLIPLSF--STLLNIY-------PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred CHHHHHHHHH---HHHhhhhhHHHHHH--HHHHHHC-------CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 3333222211 11211111 11122 2223442 1244566677766667778889999999998876766
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCccccccc----C---Ccccccccccccc-chhHHHH
Q 012017 176 ASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQST----S---MPRERESLLSHDE-NNAELAE 247 (473)
Q Consensus 176 ~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~-~~~~~~~ 247 (473)
....+.+...++....=+++ .|+-. ++++ + +.|..... . .....++ .++++ .++....
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~-------~~~~~--~~~~-~---~~d~~g~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 222 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFI-------LPRDK--PAAS-E---NFDFLGLLLLSVGLGSLLYGLSE-GPERGWFDSNEIL 222 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHH-------cCCcc--cccc-C---CCcHHHHHHHHHHHHHHHHHHhh-CCCCCCCCchHHH
Confidence 55444444433333221111 22100 0000 0 00000000 0 0000000 00000 0000000
Q ss_pred H-------HHHHHHHhhhcccccccchhhhhhccchhh-hHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHH
Q 012017 248 K-------RWRWKIIDWISNAPCVGAWQVYLKQEVVLP-GVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISA 318 (473)
Q Consensus 248 ~-------~~~~~~~~~l~~~~~~~~w~~Y~~q~vfla-slalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~ga 318 (473)
. .......++.+++.+..+++. +++|.+.. .+...+.++...+.......|+.+ .|+++...|..-....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~ 301 (485)
T TIGR00711 223 ILSITGLVAIIAFVVWELTDDNPLVDLRL-FKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG 301 (485)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCccCHHH-HcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0 000000111111122334444 44554443 344444444444444455667776 6999999999999889
Q ss_pred HHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-hccc-hhHH--HHHHHhhhhhhcchhhhhhhhhhhhhc
Q 012017 319 TIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHN-SLVA--AYMLMVGVATSRLGLWMFDLSVIQQMQ 394 (473)
Q Consensus 319 v~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~-~~~~-~~~s--~~~l~~gi~~SR~GLW~fDL~v~qi~Q 394 (473)
+..+.+..+..++.+|+|..+.-.++......... ...+ +.++ +... ...++.|+ |.=.+-.......|
T Consensus 302 ~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~g~-----g~~~~~~~~~~~~~ 374 (485)
T TIGR00711 302 LAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFY--WRAFTFTPDTPFLAIALPQFIRGF-----GMGCFFMPLTTIAL 374 (485)
T ss_pred HHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH--HHhccCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 99999999999999999976654443332211111 1111 1121 1111 11222222 22122234556778
Q ss_pred cccCCCcccchhhhhHHHHHHHHHH
Q 012017 395 DLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 395 e~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
+.+|+++||+.+|+.+..+++-..+
T Consensus 375 ~~~~~~~~g~~~~~~~~~~~~g~~i 399 (485)
T TIGR00711 375 SGLPPHKIARGSSLSNFTRQLGGSI 399 (485)
T ss_pred hcCCHHHHhHHHHHHHHHHHHHHHH
Confidence 8899999999999999888876544
No 46
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.50 E-value=0.00011 Score=76.24 Aligned_cols=151 Identities=12% Similarity=0.133 Sum_probs=85.6
Q ss_pred hhhhhhccchhhh-HHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH-H
Q 012017 267 WQVYLKQEVVLPG-VSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW-S 344 (473)
Q Consensus 267 w~~Y~~q~vflas-lalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~-~ 344 (473)
++.-+++|.++.. ++..+.+....++......|+++.|+++...+..-+...+.++.+++...++.+|+|..|.-.+ +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 294 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFG 294 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 3334455544433 2222223333344445567888899999999988888889999999999999999996553221 1
Q ss_pred HHHHHHHHHHHHHHhhc----cchhH--HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHH
Q 012017 345 IWSQWFCLLICVASIWI----HNSLV--AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 418 (473)
Q Consensus 345 l~~Q~~~L~~~v~s~~~----~~~~~--s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~l 418 (473)
......+ +....+. .++.. -...++.|+..+ .+ ...++.++| +++++||+..|+.+...++...
T Consensus 295 ~l~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~-----~~-~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~ 364 (402)
T TIGR00897 295 GVGCGIF---TLALYYIPQHFGHSFAVALIIAIALGIFLA-----GY-VPLAAVFPT-LAPKHKGAAMSVLNLSAGLSAF 364 (402)
T ss_pred HHHHHHH---HHHHHHHHHccCCcHHHHHHHHHHHHHHHH-----HH-HHHHHHHHh-hCcchhHHHHHHHHHHHHHHHH
Confidence 1111111 1111111 11111 122233333332 21 233456666 4556899999999888888765
Q ss_pred HHH-HhHHhc
Q 012017 419 MAY-TMGIII 427 (473)
Q Consensus 419 l~~-v~~Ii~ 427 (473)
+.- +.+.+.
T Consensus 365 ~gp~i~g~l~ 374 (402)
T TIGR00897 365 LAPAIAVLFI 374 (402)
T ss_pred HHHHHHHHHH
Confidence 444 444555
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.47 E-value=0.00034 Score=71.83 Aligned_cols=228 Identities=15% Similarity=0.101 Sum_probs=116.6
Q ss_pred HHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhh
Q 012017 43 SASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAG 122 (473)
Q Consensus 43 ~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~ 122 (473)
.+..++..+..|.+.||..|.+.+..+.+.- ++++. +.... ++...+.+... +.+........ .
T Consensus 48 ~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~----~i~~~----~~~~~----~~~~~~~~~~~---l~g~~~~~~~~-~ 111 (392)
T PRK10473 48 LAGMAAAMLFAGKIADRSGRKPVAIPGAALF----IIASL----LCSLA----ETSSLFLAGRF---LQGIGAGCCYV-V 111 (392)
T ss_pred HHHHHHHHHhHhHHHHHhCChHHHHHHHHHH----HHHHH----HHHHh----CcHHHHHHHHH---HHHhhhhHHHH-H
Confidence 3455677899999999999988765443221 11111 11111 12222211111 11221111111 1
Q ss_pred hhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 012017 123 TILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKG 202 (473)
Q Consensus 123 ~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~ 202 (473)
..+.-+||. ++ +.+.+.++...-+-....+++|++.+.+.+..+++....+.++..++....-++.
T Consensus 112 ~~~~i~~~~------~~-~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~------- 177 (392)
T PRK10473 112 AFAILRDTL------DD-RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFI------- 177 (392)
T ss_pred HHHHHHHHc------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHH-------
Confidence 112223332 22 4567777777777778889999999988776676666555555555444332221
Q ss_pred ccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHH
Q 012017 203 IPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSL 282 (473)
Q Consensus 203 vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslal 282 (473)
.|+-. ++ +.++ + . ... + ..++.+++|.++..+..
T Consensus 178 ~~~~~----~~-------~~~~--~------------~--~~~--~-----------------~~~~~~~~~~~~~~~~~ 211 (392)
T PRK10473 178 LKETR----PA-------RAPA--A------------S--SKP--R-----------------ENSESLLNRFFLSRLVI 211 (392)
T ss_pred cCCCC----Cc-------ccCC--c------------c--chH--H-----------------HHHHHHhCHHHHHHHHH
Confidence 12100 00 0000 0 0 000 0 00112333333322222
Q ss_pred HHHH-hhhcCCchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH
Q 012017 283 ALLF-FTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 346 (473)
Q Consensus 283 alLY-~TVLsf~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~ 346 (473)
..+. .....+-....-|+. ..|+++...|..-....+.++.+.+..+++.+|+|..|.-.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 212 TTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 2221 111222222223444 459999999998888889999999999999999998766554443
No 48
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.45 E-value=0.00019 Score=75.54 Aligned_cols=181 Identities=13% Similarity=0.114 Sum_probs=98.8
Q ss_pred hhhccchhhhHHHHHH-HhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHH
Q 012017 270 YLKQEVVLPGVSLALL-FFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 347 (473)
Q Consensus 270 Y~~q~vflaslalalL-Y~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~ 347 (473)
.+++|.+.......++ |....++......|+++ .|+++...|..-.+-.+.++.++++..++.+|+|.-|....+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 326 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFF 326 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHH
Confidence 3456655444333333 33323455566788887 599999999888888888999999999999999644322222211
Q ss_pred HHHHHHHHHHHhhc-c--chhHH-HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-H-HHH
Q 012017 348 QWFCLLICVASIWI-H--NSLVA-AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-L-MAY 421 (473)
Q Consensus 348 Q~~~L~~~v~s~~~-~--~~~~s-~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-l-l~~ 421 (473)
-.. ...++..++. + ..... ..++..|. +.++-=.......+|..|+++||+..|+.++..++.. . -.+
T Consensus 327 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~ 400 (438)
T TIGR00712 327 MTL-VTIAVIVYWMNPAGNPLVDMICMIVIGF-----LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 400 (438)
T ss_pred HHH-HHHHHHHHHhcCCCchHHHHHHHHHHHH-----HHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcch
Confidence 111 1111222222 1 11111 11222222 2222111112245678899999999999998877653 3 356
Q ss_pred HhHHhccCCCcchhHH-HHHHHHHHHHHHHHHHHHHHhh
Q 012017 422 TMGIIISNPQDFWKLI-LISVIVVTLAAILYTFHLYRIR 459 (473)
Q Consensus 422 v~~Ii~~~P~~F~~lv-~iS~~~V~~a~~~y~~~~~~~r 459 (473)
+.+.+.. ++++-. +.-...+.+.+..+..++.++.
T Consensus 401 l~G~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 401 IVGYTVD---FFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred hHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6666664 334322 2333344445555666555543
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.44 E-value=0.00017 Score=76.62 Aligned_cols=148 Identities=13% Similarity=0.118 Sum_probs=88.1
Q ss_pred hhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh--hhhhhHHHHHH
Q 012017 269 VYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSR--ISTLRTGLWSI 345 (473)
Q Consensus 269 ~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r--iGlvrtGl~~l 345 (473)
.++++|.|+..+....+.... .+.-.....|+.+.|+++...|.+-++..+.++.++....++.+| ++..|.-+++.
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 367888776555544443322 233334567888899999999999888888888888888888765 33333222221
Q ss_pred --HHHHHHHHHHHHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 346 --WSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 346 --~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
.....++.. .. ..++. ......++.|+ |.-+...+...+++|.+|+++||+..|+-++.+++-..+--.
T Consensus 316 ~~~~~~l~~ll--~~-~~~~~~~~~i~~~~~G~-----~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~ 387 (455)
T TIGR00892 316 ALLFNGLTHLL--CA-LAGDYTGLVIYCIFFGL-----SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPP 387 (455)
T ss_pred HHHHHHHHHHH--HH-HhchHHHHHHHHHHHHH-----HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccc
Confidence 111111111 11 11211 11222333332 333445567778889999999999999999888887655443
Q ss_pred hH
Q 012017 423 MG 424 (473)
Q Consensus 423 ~~ 424 (473)
+.
T Consensus 388 i~ 389 (455)
T TIGR00892 388 LA 389 (455)
T ss_pred ce
Confidence 33
No 50
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.42 E-value=0.001 Score=69.92 Aligned_cols=117 Identities=11% Similarity=0.056 Sum_probs=67.1
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW-IHNSLVAAYMLM 372 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~-~~~~~~s~~~l~ 372 (473)
-+-.|+.+ .|++....+..-.+..+.+..+..+..++.+|+|.-|.-.+....=..+..+...... .+.+.....++.
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVM 344 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 35567765 6999999998888888888888888899999999766544332210001111110011 111121111111
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST 415 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl 415 (473)
.+... .|... ....-..+|..|++.||+..|+.+++.+.
T Consensus 345 ~~~~~--~~~~~--~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 345 CALLI--VSFYT--SISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred HHHHH--HHHHH--HHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 11111 11111 12334578999999999999999988765
No 51
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.42 E-value=0.00016 Score=76.06 Aligned_cols=159 Identities=13% Similarity=0.072 Sum_probs=91.3
Q ss_pred hhhhhccchhhhHHHHHHHhhhcCC-chhHHHHHHhcCCCc--------hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh
Q 012017 268 QVYLKQEVVLPGVSLALLFFTVLSF-GTLMTATLEWEGIPA--------YIIGIARGISATIGIAATILYPILQSRISTL 338 (473)
Q Consensus 268 ~~Y~~q~vflaslalalLY~TVLsf-~~lmtaYl~~~G~s~--------~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv 338 (473)
+...|+|.|..-+...++...+..+ ......|+.+.|+++ ..+|..-++..+.++.+.+..+++.+|+|..
T Consensus 202 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r 281 (418)
T TIGR00889 202 FILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK 281 (418)
T ss_pred HHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 3345566554433333332221111 122345776667654 6789999999999999999999999999987
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhH-HHHHHHH
Q 012017 339 RTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN-SLQSTMD 417 (473)
Q Consensus 339 rtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~-Sl~slf~ 417 (473)
+.=..+.....++.. +.... +....+...++.+.++--++.=.+..+...++.|..|+++||+..|+.+ +.+++-.
T Consensus 282 ~~l~~~~~~~~v~~~--l~~~~-~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 282 KVMLLSLVAWALRFG--FFAYG-DPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred HHHHHHHHHHHHHHH--HHHHc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 765555544333221 11111 1111112222222222222212334566778899999999999999986 4555554
Q ss_pred HH-HHHhHHhccC
Q 012017 418 LM-AYTMGIIISN 429 (473)
Q Consensus 418 ll-~~v~~Ii~~~ 429 (473)
.+ ..+.+.+...
T Consensus 359 ~iGp~l~G~l~~~ 371 (418)
T TIGR00889 359 LLGYILSGVMVEK 371 (418)
T ss_pred HHHHHHHHHHHHH
Confidence 43 4555566654
No 52
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=0.00037 Score=72.57 Aligned_cols=347 Identities=10% Similarity=0.053 Sum_probs=161.9
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhH
Q 012017 20 VGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFI 99 (473)
Q Consensus 20 v~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~ 99 (473)
.+.++.+-+.-+-.-++...-.-.+..+++.+..|++.||..|.+++..+.+..-+ ++.. +... +++.
T Consensus 30 l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~----~~~~---~~~~-----~~~~ 97 (395)
T PRK10054 30 MTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS----GFIA---IPLV-----NNVT 97 (395)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH----HHHH---HHHH-----hHHH
Confidence 34555554443444444444444567788899999999999998877666543321 1211 1111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHH
Q 012017 100 AFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAM 179 (473)
Q Consensus 100 ~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~ 179 (473)
.+.++.. +.++...... -.+ ..|+.-..+ |++..+.++..+-.+-..-.++|.+.|.+.. .+++....
T Consensus 98 ~~~~~~~---~~g~~~~~~~----~~~-~~~~~~~~~---~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~ 165 (395)
T PRK10054 98 LVVLFFA---LINCAYSVFS----TVL-KAWFADNLS---STSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFW 165 (395)
T ss_pred HHHHHHH---HHHHHHHHHH----HHH-HHHHHHhcC---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHH
Confidence 2111111 1121111111 111 222221222 2457788888888889999999999999875 45444333
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhc
Q 012017 180 TLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWIS 259 (473)
Q Consensus 180 ~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (473)
+.++.-++...+=++++ |+-+ ++ + + ++ + +.. . .
T Consensus 166 ~~~~~~~i~~i~~~~~~-------~~~~----~~-~-----~-~~--~--------------~~~---~--~-------- 198 (395)
T PRK10054 166 LAAICSAFPLVFIQIWV-------QRSE----KA-I-----A-TE--T--------------GSV---W--S-------- 198 (395)
T ss_pred HHHHHHHHHHHHHHHHH-------hccc----cc-c-----c-cc--h--------------hhh---h--h--------
Confidence 33333333322211111 1100 00 0 0 00 0 000 0 0
Q ss_pred ccccccchhhhhhccchhhh-HHHHHHHhh---hcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh
Q 012017 260 NAPCVGAWQVYLKQEVVLPG-VSLALLFFT---VLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI 335 (473)
Q Consensus 260 ~~~~~~~w~~Y~~q~vflas-lalalLY~T---VLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri 335 (473)
.+.-+++|.++.- +...+..+. ..++-..+.......|.++..+|.+-...++..+...+...++.+|.
T Consensus 199 -------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 271 (395)
T PRK10054 199 -------PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA 271 (395)
T ss_pred -------hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC
Confidence 0112344433322 222222222 22222222222245677888888888888877777766666777777
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHH
Q 012017 336 STLRTGLWSIWSQWFCLLICVASIW-IHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS 414 (473)
Q Consensus 336 GlvrtGl~~l~~Q~~~L~~~v~s~~-~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~s 414 (473)
|..+.=.++...... +...+. ..++ ...+....+..=+|-...--+....+++.+|++.||+..|+++...-
T Consensus 272 ~~~~~l~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 344 (395)
T PRK10054 272 NIRPLMTAGTLCFVI----GLVGFIFSGNS---LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWL 344 (395)
T ss_pred CchhHHHHHHHHHHH----HHHHHHHcchH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHHHHH
Confidence 654432333222221 111111 1111 11112222222234333333455678888999999999887642211
Q ss_pred HHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012017 415 TMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFH 454 (473)
Q Consensus 415 lf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~ 454 (473)
-.-+-.++.+.+. ++++.-...=+.++..+.......
T Consensus 345 G~~~Gp~~~G~l~---~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 345 GAAINPLVSGVIL---TTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHH---HHcChhhHHHHHHHHHHHHHHHHH
Confidence 2234455555665 345543333334444444444444
No 53
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.40 E-value=0.00026 Score=73.77 Aligned_cols=118 Identities=8% Similarity=0.002 Sum_probs=67.4
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHhhhhhhcc
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVA-AYMLMVGVATSRL 380 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s-~~~l~~gi~~SR~ 380 (473)
.++.+...+|..-++..+.+..+.+..+++.+|+|..|.-.++......... ... +.+++..- ...++.|+
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~--l~~-~~~~~~~~~~~~~l~g~----- 327 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRII--GSG-FATGPLEVSILKLLHAF----- 327 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHH--HHH-hcccHHHHHHHHHHHHH-----
Confidence 4577778899999999999999999999999999987765444433222111 111 22322211 11111111
Q ss_pred hhhhhhhhhhhhhccccCCCcccchhhh-hHHHHHHHHHH-HHHhHHhc
Q 012017 381 GLWMFDLSVIQQMQDLVPESDRCVVGGV-QNSLQSTMDLM-AYTMGIII 427 (473)
Q Consensus 381 GLW~fDL~v~qi~Qe~V~e~~Rg~v~gv-q~Sl~slf~ll-~~v~~Ii~ 427 (473)
+.=.+-.+....++|..|++.|++..++ .+...++-..+ ..+.+.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 1001122344677888999999887655 33333443333 44445554
No 54
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.40 E-value=0.00018 Score=74.67 Aligned_cols=148 Identities=13% Similarity=0.124 Sum_probs=77.2
Q ss_pred chhhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH
Q 012017 266 AWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 343 (473)
Q Consensus 266 ~w~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~ 343 (473)
.++.-+++|.+...+...+++.... .+.....-|.+. .| ++...+.+-++..+.++.+..+.+++.+|+|..++-.+
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAG 292 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3444455665554444444433221 222222223332 23 45677777888889999999999999999997766555
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccC-------CCcccchhhhhHHHHHHH
Q 012017 344 SIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVP-------ESDRCVVGGVQNSLQSTM 416 (473)
Q Consensus 344 ~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~-------e~~Rg~v~gvq~Sl~slf 416 (473)
+........ ....+.+++.. .+....++.=+|.=........+++|.+| ++++|..+|+.+..+++-
T Consensus 293 ~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g 366 (437)
T TIGR00792 293 GILLMVLGY---LIFFFAGSNLP---LILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLG 366 (437)
T ss_pred HHHHHHHHH---HHHHHcchhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHH
Confidence 543332221 11122222211 11111222222222222333445556554 456788888888887777
Q ss_pred HHHH
Q 012017 417 DLMA 420 (473)
Q Consensus 417 ~ll~ 420 (473)
..+.
T Consensus 367 ~~lg 370 (437)
T TIGR00792 367 QALA 370 (437)
T ss_pred HHHH
Confidence 5443
No 55
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.35 E-value=0.00083 Score=72.44 Aligned_cols=159 Identities=16% Similarity=0.072 Sum_probs=93.5
Q ss_pred chhhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHH-hcCCCchHHHHHh-HHHHHHHhhHHhhHHHHHhhhhhhhHHH
Q 012017 266 AWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLE-WEGIPAYIIGIAR-GISATIGIAATILYPILQSRISTLRTGL 342 (473)
Q Consensus 266 ~w~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~-~~G~s~~~ig~~R-g~gav~Gl~gT~~~p~l~~riGlvrtGl 342 (473)
++++++++|-+..-+...++|.... .....+..|+. ..|+++..+|..- ..+.+.++.|.++.+++.+|+|..|.-.
T Consensus 214 ~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~ 293 (491)
T PRK11010 214 PLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM 293 (491)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3555666665444444445554322 22335666765 4799999999997 6888999999999999999999877655
Q ss_pred HHHHHHHHHHHHH-HHHhhccchhHH--HHHHH----hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH
Q 012017 343 WSIWSQWFCLLIC-VASIWIHNSLVA--AYMLM----VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST 415 (473)
Q Consensus 343 ~~l~~Q~~~L~~~-v~s~~~~~~~~s--~~~l~----~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl 415 (473)
.+...+.++.... .... .+.+... ...++ .|+.. -+..-++.+.+|++.+++..|+.+++.++
T Consensus 294 i~~~l~~l~~l~~~~l~~-~~~~~~~l~~~~~l~~~~~g~~~---------~~~~a~~~~l~~~~~~~t~~gl~~s~~~l 363 (491)
T PRK11010 294 IFGILQGVSNAGYWLLSI-TDKNLYSMGAAVFFENLCGGMGT---------AAFVALLMTLCNKSFSATQFALLSALSAV 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 5555554432211 1112 1222211 11222 22211 12234556667777788888888887777
Q ss_pred HHH-HHHHhHHhccCCCcchhHH
Q 012017 416 MDL-MAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 416 f~l-l~~v~~Ii~~~P~~F~~lv 437 (473)
-.. ...+.+.+. ++++|..
T Consensus 364 g~~~~~~~~G~l~---~~~G~~~ 383 (491)
T PRK11010 364 GRVYVGPVAGWFV---EAHGWPT 383 (491)
T ss_pred HHHHHHHHHHHHH---HHhChHH
Confidence 654 455556665 3455544
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.32 E-value=0.00017 Score=72.55 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=54.3
Q ss_pred hhhccch-hhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH
Q 012017 270 YLKQEVV-LPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 346 (473)
Q Consensus 270 Y~~q~vf-laslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~ 346 (473)
.+++|.+ +..+...+.+....++...+..|+++ .|+++...|.+-.+..+.++.++...+++.+|+|..|.-..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 299 (366)
T TIGR00886 221 VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFL 299 (366)
T ss_pred HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHH
Confidence 3445543 33444333333334555666678876 59999999999999999999999999999999998765555444
No 57
>PRK10504 putative transporter; Provisional
Probab=98.32 E-value=0.00083 Score=70.86 Aligned_cols=142 Identities=6% Similarity=-0.048 Sum_probs=89.6
Q ss_pred hhhccchhhhHHHHHHHhhhcC-CchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHH
Q 012017 270 YLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 347 (473)
Q Consensus 270 Y~~q~vflaslalalLY~TVLs-f~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~ 347 (473)
.+++|.|...+...+++....+ ......-|++. .|+++...|..-....+.++.+.++.+++.+|+|..|.-.++...
T Consensus 257 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~ 336 (471)
T PRK10504 257 LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG 336 (471)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 5778888888777777665432 22234446664 799999999998888888888889999999999987664444332
Q ss_pred HHHHHHHHHHHhhcc-ch-hHH--HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH
Q 012017 348 QWFCLLICVASIWIH-NS-LVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 348 Q~~~L~~~v~s~~~~-~~-~~s--~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
-.+. +....+.+ .+ ... ...++.| +|--..--..+-++++.+|+++||..+|+.+..+++-..+
T Consensus 337 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 404 (471)
T PRK10504 337 LALV---SLLFMLVALLGWYYLLPFVLFLQG-----MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI 404 (471)
T ss_pred HHHH---HHHHHhccccccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH
Confidence 2211 11111221 11 111 1122222 2222223345667788999999999999988888776443
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.27 E-value=0.00012 Score=77.37 Aligned_cols=350 Identities=13% Similarity=0.068 Sum_probs=164.6
Q ss_pred HHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhh
Q 012017 43 SASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAG 122 (473)
Q Consensus 43 ~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~ 122 (473)
....++.++..|.+.||..|.+++-.+.++--+ ++.+ ...... .++..+.+ .-.+.|..+-....+
T Consensus 86 ~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~----~~~~--~~~~~~----~~~~~l~~---~r~~~G~~~~~~~~~- 151 (465)
T TIGR00894 86 FYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSV----ISIV--IPWAAG----GGIALVVF---CRVIQGLAQGSVSPA- 151 (465)
T ss_pred HHHHHHHHcchHHHHHHhCcchhhHHHHHHHHH----HHHH--HHHHHH----cCchHHHH---HHHHHHHhcccchhh-
Confidence 345677788889999999998876555432111 1111 000000 11111111 111222222211111
Q ss_pred hhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhh-hHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 012017 123 TILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFV-SLQASAMTLAIWTTVTVWVEYWLFMSVYK 201 (473)
Q Consensus 123 ~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~l~~VY~ 201 (473)
....-.||. +++...+.++...---.+...++|.+.|.+.... +.+....+.+++.++-.++ ....++
T Consensus 152 ~~~~~~~~~-------~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~----~~~~~~ 220 (465)
T TIGR00894 152 THKIIVKWA-------PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLL----WFVFPA 220 (465)
T ss_pred HHHHHHhcC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHH----HHHHhc
Confidence 112333452 2245778888877667788899999999987763 6655544444443332221 111222
Q ss_pred hccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHH
Q 012017 202 GIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVS 281 (473)
Q Consensus 202 ~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflasla 281 (473)
..|+-+++.+ +.+.+. ..+...++-.+.+....|+..+++|.+.....
T Consensus 221 ~~p~~~~~~~-------~~~~~~-------------------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (465)
T TIGR00894 221 DDPSIHPCIS-------KFEKKY-------------------------INSSLQGQKGSTRQSLPIKAIPKSLPVWAIWF 268 (465)
T ss_pred CCcccCCCCC-------HHHHHH-------------------------HHhhcccccCCCCCCCCHHHHhcCHHHHHHHH
Confidence 2232110000 000000 00000000000000235777777774443333
Q ss_pred -HHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh----hHHHHHHHHHHHH-HHH
Q 012017 282 -LALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTL----RTGLWSIWSQWFC-LLI 354 (473)
Q Consensus 282 -lalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv----rtGl~~l~~Q~~~-L~~ 354 (473)
....|+..-.+-.-+-.|+++ .|++....|..-++..+.++.+.++..++.+|++.- |... .......+ +.+
T Consensus 269 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ 347 (465)
T TIGR00894 269 AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAA-RKIFNGIGGLGP 347 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH-HHHHHHHHHHHH
Confidence 333333322344456678876 599999999998888888888888888888776522 1111 11111111 111
Q ss_pred HHHHh---h-ccchhHHHHHHHhhhhhhcchhhhhhhhhh-hhhccccCCCcccchhhhhHHHHHHHHHHHHHhHH-hcc
Q 012017 355 CVASI---W-IHNSLVAAYMLMVGVATSRLGLWMFDLSVI-QQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGI-IIS 428 (473)
Q Consensus 355 ~v~s~---~-~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~-qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~I-i~~ 428 (473)
++..+ . ..........+..+.... |.. .... ...||..|+ .+|.++|+.+...++...+.-.++= +..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~---~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 348 GIFAYALPYLSAAFYLTIIILTLANAVS--SGP---LAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHh--hhh---hhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 11111 1 111122222222222111 111 1111 233454554 8999999999999988776655443 332
Q ss_pred C--CCcchhHHHHHHHHHHHHHHHHHHHHH
Q 012017 429 N--PQDFWKLILISVIVVTLAAILYTFHLY 456 (473)
Q Consensus 429 ~--P~~F~~lv~iS~~~V~~a~~~y~~~~~ 456 (473)
. +.+|...-.+..+....+.++|....+
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 2 133555555555555555555554433
No 59
>PRK15075 citrate-proton symporter; Provisional
Probab=98.19 E-value=0.0039 Score=65.54 Aligned_cols=128 Identities=10% Similarity=-0.015 Sum_probs=74.3
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-H--HHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-A--AYM 370 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s--~~~ 370 (473)
.+..|+++ .|+++.+.+..-.+..+.++.++.+..++.+|+|..|.=.++......+..+ +.....+.+.. . ...
T Consensus 260 ~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 338 (434)
T PRK15075 260 YTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYP-ALSWLVAAPSFARMLAVE 338 (434)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-HHHHHHcCCchHHHHHHH
Confidence 46678876 6999998888877788888899999999999999766544433222211111 11111111111 1 111
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHH--HHHHHHhHHhcc
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIIS 428 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf--~ll~~v~~Ii~~ 428 (473)
++.+.. .|. +.-......+|.+|+++||+..|+.+++.+.. -+..++.+.+..
T Consensus 339 ~~~~~~---~g~--~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 339 LWLSFL---YGS--YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHHHH---HHH--HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 222222 121 22223356789999999999999877665542 234455555543
No 60
>PRK03699 putative transporter; Provisional
Probab=98.15 E-value=0.0055 Score=63.40 Aligned_cols=55 Identities=7% Similarity=-0.091 Sum_probs=44.2
Q ss_pred CCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 291 SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 291 sf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
++...+..|+++ .|+++.+.|..-+.-.+.+..|.++.+++.+|+|..|.-....
T Consensus 223 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~ 278 (394)
T PRK03699 223 TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLA 278 (394)
T ss_pred HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Confidence 444556778865 5999999999888888888999999999999999877654443
No 61
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.13 E-value=0.00024 Score=76.23 Aligned_cols=152 Identities=6% Similarity=-0.061 Sum_probs=97.2
Q ss_pred hhhccchhhhHHHHHH-HhhhcCCchhHHHHH---HhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 270 YLKQEVVLPGVSLALL-FFTVLSFGTLMTATL---EWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 270 Y~~q~vflaslalalL-Y~TVLsf~~lmtaYl---~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
.+++|....-+.+.++ |...-+. ...-|. ...|+++..+|...+.+++.++.|.+.+.++.+|+|..+.=.++.
T Consensus 248 ~l~~~~i~~~l~fifl~~~~~~~~--~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~ 325 (468)
T TIGR00788 248 AIQLLEIAKPLIFIFLSYANLPGA--SGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTT 325 (468)
T ss_pred HHhcHHHHHHHHHHHHHHhhcCCC--CceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 3788887777777777 7643222 222122 357999999999999999999999999999999999777766666
Q ss_pred HHHHHHHHHHH--HHhhccchhHH-HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 346 WSQWFCLLICV--ASIWIHNSLVA-AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 346 ~~Q~~~L~~~v--~s~~~~~~~~s-~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
..+..+...-. ..-|.....++ .....+..++--++-=..-+....++++.+|++++|+..|+.+|++++-.++.-.
T Consensus 326 ~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 326 LLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 55544332211 11111000000 0011111112222222233445788899999999999999999999998877665
Q ss_pred h
Q 012017 423 M 423 (473)
Q Consensus 423 ~ 423 (473)
+
T Consensus 406 ~ 406 (468)
T TIGR00788 406 L 406 (468)
T ss_pred H
Confidence 3
No 62
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.10 E-value=0.006 Score=62.70 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=69.5
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
...|++++|+++..+|..=+...+.++.+.+...++.+|+|..+.-..+......+... +. +........++.|.
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~----~~-~~~~~~~~~~l~g~ 297 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIA----ML-SQAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHH----Hh-hhHHHHHHHHHHHH
Confidence 55688889999999999999999999999999999999999866544444443332211 11 11111111122222
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
. -. ..--+.+..+.|.+|+++++..++..+...++-.
T Consensus 298 ~--~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~ 334 (381)
T PRK03633 298 A--GF---TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGS 334 (381)
T ss_pred H--HH---hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Confidence 1 11 1223455556788888888877777665555444
No 63
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.10 E-value=0.0031 Score=67.03 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=89.9
Q ss_pred hhcc-chhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHH
Q 012017 271 LKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 348 (473)
Q Consensus 271 ~~q~-vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q 348 (473)
+++| .+...+...+.|..-.++...+..|+++ .|+++...+..-..-.+.++.|..+..++.+|+|.-|.-.......
T Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~ 334 (467)
T PRK09556 255 LKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALA 334 (467)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 4555 3444455555555444555667779976 6999998888877777888999999999999998765433322222
Q ss_pred HHHHHHHHHHhhccchh-HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH-H-HHHHHHhHH
Q 012017 349 WFCLLICVASIWIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST-M-DLMAYTMGI 425 (473)
Q Consensus 349 ~~~L~~~v~s~~~~~~~-~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl-f-~ll~~v~~I 425 (473)
..++...... ..+... .....+..|... .|.... ..-...|.+|+++||+.+|+-+...++ - -+..++.+.
T Consensus 335 ~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~--~~~~~~---~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 335 LIIFTLGVYQ-HATSEYMYLASLFALGFLV--FGPQLL---IGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHHHH-hcCcHHHHHHHHHHHHHHH--hhHHHH---HHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 2111111111 111111 123333344321 111111 112445899999999999999999886 3 355666666
Q ss_pred hcc
Q 012017 426 IIS 428 (473)
Q Consensus 426 i~~ 428 (473)
+..
T Consensus 409 i~~ 411 (467)
T PRK09556 409 IAD 411 (467)
T ss_pred Hhc
Confidence 665
No 64
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.08 E-value=0.0033 Score=63.70 Aligned_cols=118 Identities=16% Similarity=0.088 Sum_probs=71.5
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhh-HHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLR-TGLWSIWSQWFCLLICVASIWIHNSLVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvr-tGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~ 370 (473)
+...+..|+++.|+++...|..-++..+.++.+++...++.+|+|..| .-.++......+... ..+.+........
T Consensus 216 ~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG---LLFAPMHGLWAWA 292 (355)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH---HHHhhhhHHHHHH
Confidence 334456788889999999999999999999999999999999996443 444444444333221 1222221111122
Q ss_pred HHhhhhhhcchhhhh-hhhhhhhhccccCCCcccchhhhhHHHHHHHH
Q 012017 371 LMVGVATSRLGLWMF-DLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 371 l~~gi~~SR~GLW~f-DL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
.+.|+ |.-.. -...+.+.|+..+++++|...|+.+++-++..
T Consensus 293 ~l~g~-----~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 335 (355)
T TIGR00896 293 LVLGL-----GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLA 335 (355)
T ss_pred HHHHH-----hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 22232 22221 22334445566667778898888777666544
No 65
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.07 E-value=0.0028 Score=67.76 Aligned_cols=149 Identities=11% Similarity=0.018 Sum_probs=77.2
Q ss_pred hhhhhhccchhhhHHHHHHHhhhcC-CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 267 WQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 267 w~~Y~~q~vflaslalalLY~TVLs-f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
|+.-++++-|+--+...+++..... +.+.+.-|.+...-++...+.+-++.++.++.+..+.+++.+|+|.-|+-.++.
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~ 303 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS 303 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 3434455555555555555543221 222333344444446677788888888899999999999999999887755554
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCC--cc-----cchhhhhHHHHHHHH
Q 012017 346 WSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES--DR-----CVVGGVQNSLQSTMD 417 (473)
Q Consensus 346 ~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~--~R-----g~v~gvq~Sl~slf~ 417 (473)
....++........+.+.. +...++...++.-+|.=.+-.....+++|.+|++ +. |.++|++.-.+.+..
T Consensus 304 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 304 IFPVLSCGVLLLMGLAAPH--NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHHHHHHHHHHHHhccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH
Confidence 4322221111111011211 1112222222222333333344566788888743 23 336666555555444
No 66
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.07 E-value=0.0019 Score=67.69 Aligned_cols=135 Identities=13% Similarity=0.151 Sum_probs=76.7
Q ss_pred CchhHHHHHHhc--CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhH-HHHHHHHHHHHHHHHHHHhhccchhHHH
Q 012017 292 FGTLMTATLEWE--GIPAYIIGIARGISATIGIAATILYPILQSRISTLRT-GLWSIWSQWFCLLICVASIWIHNSLVAA 368 (473)
Q Consensus 292 f~~lmtaYl~~~--G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrt-Gl~~l~~Q~~~L~~~v~s~~~~~~~~s~ 368 (473)
+..-+-.|+.+. |+++...|.+-..-.+.++.|+++..++.+|+|..|. -..........+ ++. ...+.+....
T Consensus 261 ~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 337 (412)
T TIGR02332 261 INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW--LLA-SATDHNLIQL 337 (412)
T ss_pred HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH--HHH-HhcCCHHHHH
Confidence 334455688763 6788888888888888899999999999999985442 122222222211 111 1122222221
Q ss_pred HHHHhhhhhhcchhhhhhhh-hhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhccCCCcch
Q 012017 369 YMLMVGVATSRLGLWMFDLS-VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIIISNPQDFW 434 (473)
Q Consensus 369 ~~l~~gi~~SR~GLW~fDL~-v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~~~P~~F~ 434 (473)
..+..+. +|-.. ... .....+|..|+++|++..|+.+...++-..+. ++.+.+......+.
T Consensus 338 ~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~ 400 (412)
T TIGR02332 338 LGIIMAS----MGSFS-AMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFN 400 (412)
T ss_pred HHHHHHH----HHhhh-hhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCc
Confidence 1111111 11111 111 12333677899999999999999988876554 45556665444333
No 67
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.01 E-value=0.012 Score=60.71 Aligned_cols=128 Identities=6% Similarity=0.036 Sum_probs=70.2
Q ss_pred CchhHHHHHHh----cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH-hhccchhH
Q 012017 292 FGTLMTATLEW----EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHNSLV 366 (473)
Q Consensus 292 f~~lmtaYl~~----~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s-~~~~~~~~ 366 (473)
++..+..|++. .|.+...+|..-+++++.+..+....+++.+|+|..|.=..+...-. +.... .+.+++..
T Consensus 234 ~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~----l~~~~~~~~~~~~~ 309 (396)
T TIGR00882 234 FDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMS----VRIIGSSFATTALE 309 (396)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH----HHHHHHHhcCChHH
Confidence 43445566654 36777889999999999999999999999999997765433332211 11111 12222221
Q ss_pred -HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhh-hHHHHHHH-HHHHHHhHHhcc
Q 012017 367 -AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGV-QNSLQSTM-DLMAYTMGIIIS 428 (473)
Q Consensus 367 -s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gv-q~Sl~slf-~ll~~v~~Ii~~ 428 (473)
....++.|+.. ++ .-....+..++..|++.|++..++ .+...++- -+...+.+.+..
T Consensus 310 ~~~~~~l~g~~~---~~--~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~ 369 (396)
T TIGR00882 310 VVILKMLHAFEV---PF--LLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD 369 (396)
T ss_pred HHHHHHHHHHHH---HH--HHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH
Confidence 12222223221 00 011233456777788877776655 33334443 333455556653
No 68
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.011 Score=62.56 Aligned_cols=239 Identities=15% Similarity=0.160 Sum_probs=145.5
Q ss_pred CCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccC
Q 012017 138 HPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRS 217 (473)
Q Consensus 138 ~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~ 217 (473)
+++.+++.+|.-+ =...++++=+..++-++.+++.+..++.+.+++.+...+ +..| . ++.+ +
T Consensus 134 ~~~~Aiaiv~~G~----tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~-------~~lP---~-~~~~-~-- 195 (394)
T COG2814 134 KRGRALALVFTGL----TLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLW-------KLLP---P-SEIS-G-- 195 (394)
T ss_pred chhhHHHHHHHHH----HHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-------HhCC---C-ccCC-C--
Confidence 3445677777766 356677777777777778899999999998888776644 4566 1 1000 0
Q ss_pred CCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHH
Q 012017 218 MPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMT 297 (473)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmt 297 (473)
..+ . +. ..-..-+|+|-.+.++...++.++ +..+
T Consensus 196 ----~~~--~---------------~~--------------------~~~~~~l~~p~v~~~l~~t~l~~~-----g~F~ 229 (394)
T COG2814 196 ----SLP--G---------------PL--------------------RTLLRLLRRPGVLLGLLATFLFMT-----GHFA 229 (394)
T ss_pred ----CCC--c---------------ch--------------------hHHHHHhcCchHHHHHHHHHHHHc-----chhh
Confidence 000 0 00 000112566666666665555544 5454
Q ss_pred HHHH-------hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012017 298 ATLE-------WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 370 (473)
Q Consensus 298 aYl~-------~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~ 370 (473)
.|-| ..|++++.++..--+=-+.|+.|+++.-++.+| +..|+-......+...+.. ..++...+ ..
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~--l~~~~~~~----~~ 302 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA--LTFTGASP----AL 302 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH--HHHhcchH----HH
Confidence 4433 369999999998888888889999999999999 9888877765655544332 22222222 11
Q ss_pred HHhhhhhhcchhhhhhhh-hhhhhccccCC---CcccchhhhhHHHHHHH-HHHHHHhHHhccCCCcchhHHHHHHHHHH
Q 012017 371 LMVGVATSRLGLWMFDLS-VIQQMQDLVPE---SDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVT 445 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~-v~qi~Qe~V~e---~~Rg~v~gvq~Sl~slf-~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~ 445 (473)
.+..+.+ |+|-.. ..|..|..+-+ +.++..++...+--|+- -+-..+-+++..+ --....-+.+...+.
T Consensus 303 ~~~~~~~-----wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~ 376 (394)
T COG2814 303 ALALLFL-----WGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLL 376 (394)
T ss_pred HHHHHHH-----HHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHH
Confidence 1222222 877765 55666766655 78888888877776665 4455666677755 444444455555555
Q ss_pred HHHHHHHH
Q 012017 446 LAAILYTF 453 (473)
Q Consensus 446 ~a~~~y~~ 453 (473)
.+..+...
T Consensus 377 ~a~~~~~~ 384 (394)
T COG2814 377 LALLLALL 384 (394)
T ss_pred HHHHHHHH
Confidence 55443333
No 69
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.01 E-value=0.0038 Score=64.86 Aligned_cols=225 Identities=12% Similarity=0.068 Sum_probs=111.8
Q ss_pred hhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCc
Q 012017 141 EALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPI 220 (473)
Q Consensus 141 ~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~ 220 (473)
++..+.++.+.--=-...+++|++.+.+....+.+....+.++..++..++=+ ..+|+-. +.+
T Consensus 110 ~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~-------~~lp~~p---~~~------- 172 (368)
T TIGR00903 110 ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL-------AALPALP---FQA------- 172 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH-------HHcCCCC---CCC-------
Confidence 45677777776666778889999999998777888766665666555443322 2234211 000
Q ss_pred ccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhh-hcCCchhHHHH
Q 012017 221 DMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFT-VLSFGTLMTAT 299 (473)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~T-VLsf~~lmtaY 299 (473)
++ . .+ .++. .+.|++-+++|.++.-....+.+.. .-++..-+-+|
T Consensus 173 --~~--~------------~~-~~~~-----------------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 173 --AE--G------------FG-FKDA-----------------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred --CC--C------------cc-hHHH-----------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00 0000 0124555666644333322222222 23555567889
Q ss_pred HHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh---hhhhHHHH-HHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 300 LEWEGIPAYIIGIARGISATIGIAATILYPILQSRI---STLRTGLW-SIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 300 l~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri---GlvrtGl~-~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
++++|++.. .|..-.+..+.|..+. +++..|. |..+.-.. ....-. +.++...+..++..... +.++
T Consensus 219 L~~~g~s~~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a---~~~~~~~~~~~~~~~~~--~~~l 289 (368)
T TIGR00903 219 LRPAGLEDI-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIA---AFFLALAFELNRLALFA--FIGI 289 (368)
T ss_pred HHHCCCChH-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHH---HHHHHHHHccccHHHHH--HHHH
Confidence 988898864 5555444445554443 4444443 32111110 110000 11111111222222111 1111
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HHHHHhHHhc
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 427 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll~~v~~Ii~ 427 (473)
+=++.-..=-....+.||..|++.||+..|+.++..++.. ....+...+.
T Consensus 290 --~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 290 --AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred --HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 1121111111244678999999999999999999999988 4444444444
No 70
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.98 E-value=0.0076 Score=63.42 Aligned_cols=117 Identities=12% Similarity=0.061 Sum_probs=68.7
Q ss_pred HHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-HH-HHHHHhhhhh
Q 012017 300 LEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VA-AYMLMVGVAT 377 (473)
Q Consensus 300 l~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~s-~~~l~~gi~~ 377 (473)
....|++...-+..-....+.++.++++..++.+|+|.-+.-.++.....++..........+... .. ..+++.+...
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 377 (479)
T PRK10077 298 FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF 377 (479)
T ss_pred HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 355788766555554556667788899999999999966555555555444432221111111111 11 1111111111
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
+ . .+.-...-+++|..|+++||+..|+.++.+++...+.
T Consensus 378 ~--~--~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 416 (479)
T PRK10077 378 A--M--SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFV 416 (479)
T ss_pred h--c--cccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 1123345678999999999999999999999888654
No 71
>TIGR00898 2A0119 cation transport protein.
Probab=97.97 E-value=0.0042 Score=66.12 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=65.5
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcch
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLG 381 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~G 381 (473)
..|.+...... +.++.++.+.++..++.+|+|..+.-.++.....+++. ...+.++.... .......+...+
T Consensus 352 ~~~~~~~~~~~---~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l---~~~~~~~~~~~--~~~~~~~~~~~~ 423 (505)
T TIGR00898 352 NLGGNIYLDLF---ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALL---LLLFVPVDLYF--LRTALAVLGKFG 423 (505)
T ss_pred ccCCChHHHHH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHcCCCchH--HHHHHHHHHHHH
Confidence 34555444444 33456677888888999999977665555544433322 22233322111 111111222222
Q ss_pred hhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 382 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 382 LW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
.=+.--....+.+|..|++.||+..|+-+....+..++.-.+.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~ 466 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV 466 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH
Confidence 2111124456778999999999999999998888876664443
No 72
>PRK09848 glucuronide transporter; Provisional
Probab=97.93 E-value=0.0084 Score=63.21 Aligned_cols=149 Identities=11% Similarity=0.008 Sum_probs=80.7
Q ss_pred chhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH
Q 012017 266 AWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 343 (473)
Q Consensus 266 ~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~ 343 (473)
.++.-++++.|.......++++.. ..+.....-|++. .|.++..-+..-..+.+..+.++.+.+++.+|+|.-|.=.+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 355566777776665555555443 2343333334443 46655544444444466677889999999999997766555
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCc-------ccchhhhhHHHHHHH
Q 012017 344 SIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESD-------RCVVGGVQNSLQSTM 416 (473)
Q Consensus 344 ~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~-------Rg~v~gvq~Sl~slf 416 (473)
+.....+. ++...+.+.. +...++....+.=+|.-.+-.....+..|.+|++| +|..+|+++-.+.+-
T Consensus 300 g~~~~~i~---~~~~~~~~~~--~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 300 GALLGTCG---YLLFFWVSVW--SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHH---HHHHHHcCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 54332221 1222233321 11222233333344555555555556677777653 477777766666555
Q ss_pred HHH
Q 012017 417 DLM 419 (473)
Q Consensus 417 ~ll 419 (473)
..+
T Consensus 375 ~ai 377 (448)
T PRK09848 375 QAI 377 (448)
T ss_pred HHH
Confidence 443
No 73
>PRK09669 putative symporter YagG; Provisional
Probab=97.92 E-value=0.017 Score=60.92 Aligned_cols=146 Identities=10% Similarity=-0.045 Sum_probs=71.9
Q ss_pred hhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCC-CchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 267 WQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGI-PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 267 w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~-s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
++.-++++.|+.-+...+++.......+.+..|.....+ ++...+.+-..+.+.++.++.+.+++.+|+|-.|+=.++.
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~ 301 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTI 301 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 344455665555555444443322222223334322222 2334456667778888999999999999999876655544
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCC-------cccchhhhhHHHHHHHH
Q 012017 346 WSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES-------DRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 346 ~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~-------~Rg~v~gvq~Sl~slf~ 417 (473)
.....+ ++..++.+... ...++...++.-+|....-....-++=|.+|++ +.|.++|+.+..+++-.
T Consensus 302 ~~~~~~---~~~~~~~~~~~--~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 302 VAFVIL---SALIFFIPPSN--VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL 375 (444)
T ss_pred HHHHHH---HHHHHHhCcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH
Confidence 332211 22222222111 222233333444444443333333443444432 23556666665555554
No 74
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.89 E-value=0.049 Score=58.43 Aligned_cols=130 Identities=10% Similarity=-0.005 Sum_probs=69.2
Q ss_pred hhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 012017 294 TLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 372 (473)
Q Consensus 294 ~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~ 372 (473)
..+..|+++ .|+++...+..-....+..+.+..+..++.+|+|--+.-..+...-.++..++.... ..++ ...++
T Consensus 271 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~ 346 (490)
T PRK10642 271 TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI-NSNV---IGLIF 346 (490)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-hCCC---HHHHH
Confidence 346678865 599887766655555666677888889999999976543333221111111111111 1111 11122
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHH-HHHHHHhHHhc
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 427 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf-~ll~~v~~Ii~ 427 (473)
.+..+..++.-++--.......|..|++.||+..|+-+.+..+. -+..++.+.+.
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~ 402 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV 402 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222221222234456667789999999888755555544 34455665554
No 75
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.87 E-value=0.0019 Score=67.78 Aligned_cols=87 Identities=10% Similarity=0.046 Sum_probs=59.2
Q ss_pred ccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHH-HHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHH
Q 012017 264 VGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTAT-LEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTG 341 (473)
Q Consensus 264 ~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaY-l~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtG 341 (473)
++.++.-+++|-|.--+...+++......-..+..| .+. -|-+ ...+.+-.+..+.++.+..+.|++.||+|..|+=
T Consensus 215 ~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~ 293 (428)
T PF13347_consen 215 RDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY 293 (428)
T ss_pred ccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh
Confidence 456677777777776666666654443332323333 333 2433 6778888899999999999999999999999876
Q ss_pred HHHHHHHHHH
Q 012017 342 LWSIWSQWFC 351 (473)
Q Consensus 342 l~~l~~Q~~~ 351 (473)
..+......+
T Consensus 294 ~~~~~~~~~~ 303 (428)
T PF13347_consen 294 IIGLLLAALG 303 (428)
T ss_pred hhhHHHHHHH
Confidence 6666654443
No 76
>PRK09952 shikimate transporter; Provisional
Probab=97.85 E-value=0.029 Score=59.26 Aligned_cols=154 Identities=8% Similarity=0.044 Sum_probs=82.9
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~ 373 (473)
.+..|+++ .|+++...+....+..+.++.++.+.+++.+|+|.-|.-.++......+..+........++.. .++.
T Consensus 272 ~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 348 (438)
T PRK09952 272 FALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFW---IVFF 348 (438)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHH---HHHH
Confidence 34557754 6888886665555666677888889999999999877766554433332222211111111111 1111
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHH-HHH-HHHHHhHHhccCC-CcchhHHHHHHHHHHHHHHH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TMD-LMAYTMGIIISNP-QDFWKLILISVIVVTLAAIL 450 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~s-lf~-ll~~v~~Ii~~~P-~~F~~lv~iS~~~V~~a~~~ 450 (473)
+..+.-++....--...-++.|.+|.+.|++..|+-+++.+ +.- +.-++.+.+.... .++.............+...
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 22222222222222244567788999999999998877755 332 3444555554422 23434444333333444444
Q ss_pred H
Q 012017 451 Y 451 (473)
Q Consensus 451 y 451 (473)
+
T Consensus 429 ~ 429 (438)
T PRK09952 429 A 429 (438)
T ss_pred H
Confidence 3
No 77
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.69 E-value=0.037 Score=59.36 Aligned_cols=60 Identities=10% Similarity=0.048 Sum_probs=43.0
Q ss_pred hhHHHHHHHhhhcCCchhHHHHHHhc-CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhh
Q 012017 278 PGVSLALLFFTVLSFGTLMTATLEWE-GIPAYIIGIARGISATIGIAATILYPILQSRIST 337 (473)
Q Consensus 278 aslalalLY~TVLsf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGl 337 (473)
..+.+.+.+....++.+....|+..+ |+++...+.+-.+-.+.++.+.++..++..|+|-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~ 317 (476)
T PLN00028 257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAAR 317 (476)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33333333333344555567788764 9999999988888888888899999999888874
No 78
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.69 E-value=0.12 Score=56.23 Aligned_cols=160 Identities=14% Similarity=0.160 Sum_probs=92.9
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh--hHHHHHHHHHHHHHHHHHHHhhc----cchhHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTL--RTGLWSIWSQWFCLLICVASIWI----HNSLVA 367 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv--rtGl~~l~~Q~~~L~~~v~s~~~----~~~~~s 367 (473)
.+.-|..+ -|++..++.++--+..++++.|+++++++.+|+|.- |+-+..+.+=..+...+...++. ..+.+.
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~ 382 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWE 382 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHH
Confidence 35557774 599999999999999999999999999999999987 66665554432222222222222 111222
Q ss_pred --HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-HHhHHhccCCCcchhHHHHHHHHH
Q 012017 368 --AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIIISNPQDFWKLILISVIVV 444 (473)
Q Consensus 368 --~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-~v~~Ii~~~P~~F~~lv~iS~~~V 444 (473)
...++.|+... |.|++. .-++-|.+|+.+.+.++|..+=.......+- .+.+.+.-...+-++.. .+....
T Consensus 383 f~~~a~~~G~~~G--~~qs~s---Rs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~-~~l~~l 456 (477)
T PF11700_consen 383 FWVLAVLIGLFMG--GIQSAS---RSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGF-LFLLVL 456 (477)
T ss_pred HHHHHHHHHHHhh--hHHHHH---HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-HHHHHH
Confidence 12222222221 123322 3477788999999999998877776666554 33445544444444433 333333
Q ss_pred HHHHHHHHHHHHHhhC
Q 012017 445 TLAAILYTFHLYRIRK 460 (473)
Q Consensus 445 ~~a~~~y~~~~~~~rg 460 (473)
...++.....+..+||
T Consensus 457 f~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 457 FLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHhhccchhh
Confidence 3333333344444443
No 79
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.45 E-value=0.074 Score=60.85 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=68.6
Q ss_pred HHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHhhhhhhcchhhhhhhh
Q 012017 310 IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-AAYMLMVGVATSRLGLWMFDLS 388 (473)
Q Consensus 310 ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s~~~l~~gi~~SR~GLW~fDL~ 388 (473)
+.+.-.++.+.++.|.++..++..|+|-.+.-+.+...-.++..+. .+.++... -...++.|.... +.|. +
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~---~~~~s~~~ll~~~~l~g~~~~--~~~~---~ 668 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFL---SFGNSESAMIALLCLFGGLSI--AAWN---A 668 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHH--HHHH---H
Confidence 4555678888999999999999999997776555544433332211 12222111 111112222111 2333 3
Q ss_pred hhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 389 VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 389 v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
...++-|..|.++||+..|+.+++..+--++.-.++
T Consensus 669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~ 704 (742)
T TIGR01299 669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIF 704 (742)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677889999999999999999999998877665
No 80
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.31 E-value=0.0072 Score=63.73 Aligned_cols=116 Identities=22% Similarity=0.306 Sum_probs=67.8
Q ss_pred chhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHH
Q 012017 31 SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNI 110 (473)
Q Consensus 31 sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~ 110 (473)
+-...+.-|=.=++.+.+-+|..|+|-|++-|.+++-.++. +++++.. +.. .++++ .+.+..=.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~----~va~s~l-----l~~---~S~~F---~afv~aR~l 130 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLI----GVALSYL-----LWA---LSRNF---AAFVLARFL 130 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHH----HHHHHHH-----HHH---HHHHH---HHHHHHHHh
Confidence 55666677777778889999999999999999999866643 2333322 111 11222 122211123
Q ss_pred HHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhh
Q 012017 111 SGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIIS 170 (473)
Q Consensus 111 ~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t 170 (473)
.|+..-.=++...|.-| +..+.++|-.++.+|..- .+--+++|++.|.+..
T Consensus 131 ~Gi~kgnl~v~rAiisd-----V~sek~r~l~ms~v~~a~----~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 131 GGIFKGNLSVIRAIISD-----VVSEKYRPLGMSLVGTAF----GLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccCchHHHHHHHHh-----hcChhhccceeeeeehhh----hcchhhcchhhhHHHh
Confidence 33333222223333222 112334556677777665 6677899999999976
No 81
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.31 E-value=0.0095 Score=58.44 Aligned_cols=140 Identities=15% Similarity=0.092 Sum_probs=100.6
Q ss_pred cCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012017 290 LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 369 (473)
Q Consensus 290 Lsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~ 369 (473)
-.+......|.++.|.++.++|..-+...+..+.+.....++.+|+|.-|.=.++......+....... + +..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~---~----~~~ 88 (352)
T cd06174 16 GLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA---S----SLW 88 (352)
T ss_pred hhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh---c----cHH
Confidence 345567778888999999999999999999999999999999999998775555555444333322211 2 223
Q ss_pred HHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhH
Q 012017 370 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKL 436 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~l 436 (473)
.++.+..+.-+|.=.++.+...++.|..|++||+...|......++...+...++-..-+..+.++.
T Consensus 89 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 155 (352)
T cd06174 89 LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWL 155 (352)
T ss_pred HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3333444444555556778888999999999999999999999998888777666555444333433
No 82
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.19 E-value=0.0049 Score=61.05 Aligned_cols=145 Identities=18% Similarity=0.144 Sum_probs=105.0
Q ss_pred HHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhh
Q 012017 299 TLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVAT 377 (473)
Q Consensus 299 Yl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~ 377 (473)
++. +-|+++.++|..-+...+....+.....++.+|+|.-|.-..+.....++...+. +.++ ...++.+..+
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~l 94 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA---FASN----FWLLLIARFL 94 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH---HHCC----HHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh---hhhh----HHHHhhhccc
Confidence 444 4599999999999999999999999999999999988877777777766622222 2222 1134444445
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHHHH
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAIL 450 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~ 450 (473)
.-+|-=.++.+...++.|..|++||+...|...+..++-.++...++-.+.+--.+.+..++.......+..+
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 5555556788888999999999999999999999999999998888777763333444544444444444443
No 83
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.17 E-value=0.49 Score=50.84 Aligned_cols=124 Identities=8% Similarity=-0.009 Sum_probs=65.7
Q ss_pred HHHHHHhcCCCchHH-----------HH-HhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc
Q 012017 296 MTATLEWEGIPAYII-----------GI-ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN 363 (473)
Q Consensus 296 mtaYl~~~G~s~~~i-----------g~-~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~ 363 (473)
+..++++.|+++..- .+ .-.+..+..+.+.++..++.+|+|--+.-+.+.....+++.+-........
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~ 390 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS 390 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445666778765311 11 122344455678888899999999766655555554444321111110001
Q ss_pred hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 364 SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 364 ~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
+......+.......-.|.+. ....+..|..|.+.||+..|+.+.++.+...+.-.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 391 THGFLAIYVLAQFFANFGPNA---TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred hhHHHHHHHHHHHHHhcCCCc---hhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 111111111111112222222 11223468889999999999999999988765533
No 84
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.13 E-value=0.01 Score=58.91 Aligned_cols=143 Identities=10% Similarity=0.048 Sum_probs=92.6
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
+.-|..+.|.++.++|..-+...+....+.....++.+|+|.-|.=+++......+.......-..++ .+...++.+.
T Consensus 22 ~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 99 (365)
T TIGR00900 22 LPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG--LNIWQVYVLA 99 (365)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC--CcHHHHHHHH
Confidence 34488888999999999999999999999999999999999877655554443332222111111111 1222222222
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILIS 440 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS 440 (473)
.+.-+|-=.++.+..-++.|..|++||+..+|..++..++-.++...++-.+-+...+.+...+.
T Consensus 100 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 100 GILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 23233322456667778889999999999999999999988877766654443333334433333
No 85
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.04 E-value=0.0045 Score=61.73 Aligned_cols=148 Identities=9% Similarity=-0.070 Sum_probs=92.7
Q ss_pred HHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 012017 282 LALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI 361 (473)
Q Consensus 282 lalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~ 361 (473)
+.+.|+..-+++..+..+.++-|+++.++|..-+...+....+.+...++.+|+|.-|.=.++.....++.... .+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~ 80 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF---GFS 80 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH---HHh
Confidence 34445444455555444444459999999999999999999999999999999998776555544433332221 122
Q ss_pred cchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHH-HhHHhccCCCcchhH
Q 012017 362 HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY-TMGIIISNPQDFWKL 436 (473)
Q Consensus 362 ~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~-v~~Ii~~~P~~F~~l 436 (473)
+ +...++.+..+.-+|.=..+....-++.|..|+++|+...|..++.+++-..+.. +.+....+.....+.
T Consensus 81 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T TIGR00881 81 T----SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWV 152 (379)
T ss_pred h----hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhH
Confidence 2 1222222222222222233455566889999999999999999988888877766 344333333344443
No 86
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.03 E-value=0.0047 Score=61.48 Aligned_cols=135 Identities=14% Similarity=-0.055 Sum_probs=88.9
Q ss_pred HHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhh
Q 012017 299 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATS 378 (473)
Q Consensus 299 Yl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~S 378 (473)
+.++-|+++.++|..-+...+....+.....++.+|+|.-|.=..+......+... ..+.++ ...++.+..+.
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~l~ 92 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL---QAFAGA----YVSLYILRVLL 92 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHH---HHHHcC----HHHHHHHHHHH
Confidence 44456999999999999999999999999999999999766655444332222111 111221 12222222222
Q ss_pred cchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHH
Q 012017 379 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILIS 440 (473)
Q Consensus 379 R~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS 440 (473)
-+|.=.+..+...++.|..|+++|+...|.-.+..++-.++...++-...+...+++.-.+.
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 154 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIE 154 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 23333456677788999999999999999999999988877766655444444455444433
No 87
>PRK11462 putative transporter; Provisional
Probab=97.01 E-value=0.53 Score=50.39 Aligned_cols=35 Identities=6% Similarity=-0.154 Sum_probs=25.5
Q ss_pred hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHH
Q 012017 308 YIIGIARGISATIGIAATILYPILQSRISTLRTGL 342 (473)
Q Consensus 308 ~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl 342 (473)
...+.+-+...+.++.|+.+.|++.+|+|--+.-.
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~ 297 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFW 297 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 34455556666778889999999999998655433
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.98 E-value=0.023 Score=58.94 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=94.5
Q ss_pred HHHHHhh-hc--CCc-hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh-----hhhhHHHHHHHHHHHHH
Q 012017 282 LALLFFT-VL--SFG-TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRTGLWSIWSQWFCL 352 (473)
Q Consensus 282 lalLY~T-VL--sf~-~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri-----GlvrtGl~~l~~Q~~~L 352 (473)
+..||++ -+ +|- +.+-.|+.++|+|.++||.+..++.. ....++..++.+|+ |--|. |-+..|..+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~--~l~~~~~~~~ 79 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRG--WLLLTQVGLA 79 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchh--HHHHHHHHHH
Confidence 5667776 22 332 35566999999999999999888887 57777788888888 54443 3344444443
Q ss_pred HHHHHHhhcc-chhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCC
Q 012017 353 LICVASIWIH-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQ 431 (473)
Q Consensus 353 ~~~v~s~~~~-~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~ 431 (473)
+..+...+.+ ...+.. ++..+++.+ ..-=..|.+..-++=|.+|++||+..++.+..-+++-.++.-.+.....+.
T Consensus 80 l~~~~l~~~~~~~~~~~-l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~- 156 (402)
T PRK11902 80 ASIAAMAFCPPHAALWP-LAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR- 156 (402)
T ss_pred HHHHHHHhcCccchHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc-
Confidence 2222222332 121111 222222223 333457888888888999999999999999988888777765555444321
Q ss_pred cchhHHHHHH
Q 012017 432 DFWKLILISV 441 (473)
Q Consensus 432 ~F~~lv~iS~ 441 (473)
.++|-...-+
T Consensus 157 ~~gw~~~f~i 166 (402)
T PRK11902 157 VLGWGNTYLL 166 (402)
T ss_pred ccCHHHHHHH
Confidence 1356544433
No 89
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=96.84 E-value=0.025 Score=58.13 Aligned_cols=138 Identities=14% Similarity=0.027 Sum_probs=91.4
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~ 370 (473)
++.....+.++.|+++..+|..-+...+..+.+.+...++.+|+|.-|.-.++.....++...+ .+.++. ..-...
T Consensus 34 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 110 (406)
T PRK11551 34 AGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT---AQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH---HHhccHHHHHHHH
Confidence 3444555667789999999999999999999999999999999998877666554333322211 112211 111222
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv 437 (473)
++.|+..+ ...-....+++|.+|+++||..+|+.+...++-..+...++....+..++.+..
T Consensus 111 ~l~G~~~~-----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (406)
T PRK11551 111 LLTGVGLG-----GALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIF 172 (406)
T ss_pred HHHHhhHH-----HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 22233211 223445667889999999999999999988888888777765555544444433
No 90
>TIGR00895 2A0115 benzoate transport.
Probab=96.80 E-value=0.016 Score=58.38 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=84.8
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
+..+.+..|+++..+|..-+...+..+.+.+...++.+|+|.-|.-.++......+.... .+.+ + ...++.+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~ 112 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC---ALAT-N---VTQLLILR 112 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHcc-c---hHHHHHHH
Confidence 334445679999999999999999999999999999999997766555554443332221 1222 1 12223333
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
.+.-+|.=..+-+...++.|..|+++|+...|.....+++-..+...++
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 3334454456677788899999999999999999988888776665554
No 91
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.78 E-value=0.024 Score=57.21 Aligned_cols=123 Identities=14% Similarity=0.060 Sum_probs=83.2
Q ss_pred hHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 012017 295 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 374 (473)
Q Consensus 295 lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~g 374 (473)
....+.++.|+++..+|..-+...+....+.....++.+|+|.-|.-..+...-..... ...+.++ ...++.+
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~ 99 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL---GLALSNN----IETLLVL 99 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH---HHHHHcc----HHHHHHH
Confidence 34445667899999999999999999999999999999999986665544332222111 1112221 1122222
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
..+.-+|.=.++.+...+++|..|+++|+...|..++..++...+...++
T Consensus 100 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 149 (385)
T TIGR00710 100 RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLG 149 (385)
T ss_pred HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344445677788899999999999999999998888776654444
No 92
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.77 E-value=0.011 Score=61.57 Aligned_cols=157 Identities=6% Similarity=-0.020 Sum_probs=94.0
Q ss_pred chhhhhhccchhhhHHHHHHHhhhcCCchh-HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHH
Q 012017 266 AWQVYLKQEVVLPGVSLALLFFTVLSFGTL-MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWS 344 (473)
Q Consensus 266 ~w~~Y~~q~vflaslalalLY~TVLsf~~l-mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~ 344 (473)
+++...+++.+..-+...+++....++-.. ...|.++.+.++.++|..-+...+..+.+.....++.+|+|.-|.=..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~ 88 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLA 88 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEeh
Confidence 344444555555544444444443333332 3335566788999999999999999999999999999999977654444
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 345 IWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 345 l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
......+........+...+. ...++....+.-++-=.+..+.+-+++|.+|+++|++.+|..+...++...+-..++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 166 (417)
T PRK10489 89 RGTCGLGFIGLALNAFLPEPS--LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALG 166 (417)
T ss_pred HHHHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHH
Confidence 444333322221111211111 111222222222222234455677899999999999999998877777666555443
No 93
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.72 E-value=1 Score=47.44 Aligned_cols=149 Identities=11% Similarity=0.031 Sum_probs=75.1
Q ss_pred hhccchhhhHHHHHHHhhhc-CCchhHHHHHHhcCCC--chHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHH
Q 012017 271 LKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIP--AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 347 (473)
Q Consensus 271 ~~q~vflaslalalLY~TVL-sf~~lmtaYl~~~G~s--~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~ 347 (473)
+|+|.+.......++|..+- +...-...|+...+.+ +..-+.+-+..-.....|-++..++.+|++..|.=.+....
T Consensus 229 ~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~ 308 (410)
T TIGR00885 229 ARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAII 308 (410)
T ss_pred HhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 45565555566666776653 4445577788765432 22222122222233356777778888888877653333332
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 348 QWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 348 Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
. .+.++...+.++...-..+.+.|...|-+ | -+.--+..+..+++.+....++.++. ----++..+++.+.
T Consensus 309 ~---~~~~ll~~~~~~~~~~~~l~~~glf~s~~--f---p~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~ 379 (410)
T TIGR00885 309 G---MALCLGSIFAGGHVGLYCLTLCSAFMSLM--F---PTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFII 379 (410)
T ss_pred H---HHHHHHHHHcCChHHHHHHHHHHHHHHHH--H---HHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHH
Confidence 2 22333334444422222333334333332 4 35556666667766655556666654 22233445555555
Q ss_pred c
Q 012017 428 S 428 (473)
Q Consensus 428 ~ 428 (473)
-
T Consensus 380 d 380 (410)
T TIGR00885 380 D 380 (410)
T ss_pred H
Confidence 3
No 94
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.68 E-value=0.036 Score=58.37 Aligned_cols=150 Identities=13% Similarity=-0.007 Sum_probs=95.8
Q ss_pred hhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 012017 277 LPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV 356 (473)
Q Consensus 277 laslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v 356 (473)
...++..+.|++..+++..+-.+.++.|+|+.++|..=+...+....+.+...++.+|+|..|.-.++...-.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~--- 103 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI--- 103 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH---
Confidence 34455566666666777777778888999999999999999999899999999999999987654444333222211
Q ss_pred HHhhccchhHHHH--HHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH-hHHhccCCCcc
Q 012017 357 ASIWIHNSLVAAY--MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT-MGIIISNPQDF 433 (473)
Q Consensus 357 ~s~~~~~~~~s~~--~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v-~~Ii~~~P~~F 433 (473)
..-+.+ +..... .++.|+... . .--+...+++|..|+++||...|..++.+++-..+.-. .+.+. +++
T Consensus 104 ~~~~~~-~~~~l~~~~~l~g~~~g-~----~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~---~~~ 174 (434)
T PRK11663 104 LFGFSS-SLWAFALLWVLNAFFQG-W----GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA---LHY 174 (434)
T ss_pred HHHHHh-HHHHHHHHHHHHHHHHH-c----cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hcc
Confidence 111112 111111 111222111 1 11345568889999999999999999998888776544 33333 245
Q ss_pred hhHHH
Q 012017 434 WKLIL 438 (473)
Q Consensus 434 ~~lv~ 438 (473)
+|-..
T Consensus 175 gw~~~ 179 (434)
T PRK11663 175 GWRYG 179 (434)
T ss_pred cHHHH
Confidence 55443
No 95
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.62 E-value=0.025 Score=57.39 Aligned_cols=124 Identities=10% Similarity=0.049 Sum_probs=86.7
Q ss_pred hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 012017 294 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~ 373 (473)
+.+-.|.++.|+|+.++|..-+...+....+.....++.+|+|.-|.-.++......+...+. +.++ .. .+..
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~---~~~~-~~---~~~~ 84 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA---LAQT-ID---QLIY 84 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH---HHcc-HH---HHHH
Confidence 345667788899999999999999999999999999999999987776666655544443332 2221 11 1112
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
+..+.-+|-=.++.....+++|..|+++|+...|..+...++...+...++
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 135 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIG 135 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222333356667778889999999999999998887777766655444
No 96
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.62 E-value=0.023 Score=59.74 Aligned_cols=122 Identities=10% Similarity=-0.082 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
...|+++.|+++..+|..-+...+....+.....++.+|+|.-|.=..+......+...... .+....+...+....
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~ 125 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGF---VPWATSSIAIMFVLL 125 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhc---cccccchHHHHHHHH
Confidence 34577778999999999999999999999999999999999766544444333333222211 111001112222222
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
.+.+++-=...-.....+-|..|+++||..+|+.+...++...+.
T Consensus 126 ~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~ 170 (438)
T TIGR00712 126 FLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIP 170 (438)
T ss_pred HHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHH
Confidence 222222111112344556678999999999999999888876553
No 97
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.50 E-value=0.049 Score=56.82 Aligned_cols=125 Identities=16% Similarity=0.107 Sum_probs=85.4
Q ss_pred HHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 012017 296 MTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 374 (473)
Q Consensus 296 mtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~g 374 (473)
+..|+. ..|+|+..+|..-+...+.+........++.+|+|.-|.-.++..........+ .+.+ +.+. +..+
T Consensus 33 ~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~---~~~~-~~~~---l~~~ 105 (400)
T PRK11646 33 ISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM---AIAH-EPWL---LWLS 105 (400)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH---HHhc-cHHH---HHHH
Confidence 444554 469999999999999888888888888999999998777666665544433322 1222 2211 1122
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
.++.-+|-=.+..+.+-++++.+|+++||...|...+..++...+--.++-..
T Consensus 106 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l 158 (400)
T PRK11646 106 CILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL 158 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222346677788899999999999999999999998887766555333
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.42 E-value=0.17 Score=53.63 Aligned_cols=190 Identities=16% Similarity=0.133 Sum_probs=108.9
Q ss_pred hhhccchhhhHHHHHHHhhhcC-CchhHHHHHHhcC-CCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHH
Q 012017 270 YLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEWEG-IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 347 (473)
Q Consensus 270 Y~~q~vflaslalalLY~TVLs-f~~lmtaYl~~~G-~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~ 347 (473)
-+|+|.++.=+..+++.-.-.+ +.+-..-|+++.| ++...+|+..++|++.|+.-=+..+++.||+|..+.=+.+...
T Consensus 203 llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~ 282 (400)
T PF03825_consen 203 LLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVA 282 (400)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3566655544444444333232 2234556999988 9999999999999999999999999999999987654433332
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH--HHHHHhHH
Q 012017 348 QWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD--LMAYTMGI 425 (473)
Q Consensus 348 Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~--ll~~v~~I 425 (473)
. .+--.+.+...++......+.+.+..+==+--=.|=.+..+.+++.+|++.|++.-|.-+++.+-.. +-.++-+.
T Consensus 283 ~--~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 283 Y--AVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred H--HHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 1122222333222222222222211111110012345678899999999999877666666554332 22344455
Q ss_pred hcc---CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 012017 426 IIS---NPQDFWKLILISVIVVTLAAILYTFHLYRIRKH 461 (473)
Q Consensus 426 i~~---~P~~F~~lv~iS~~~V~~a~~~y~~~~~~~rgh 461 (473)
+.. .+.-|.|..+..+.++........++...+++|
T Consensus 361 l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 361 LYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 442 334577777776666655554444444444454
No 99
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.36 E-value=0.11 Score=52.49 Aligned_cols=128 Identities=9% Similarity=0.114 Sum_probs=77.2
Q ss_pred hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh-----hhhhHHHHHHHHHHHHHHHH-HHHhhccchhHH
Q 012017 294 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRTGLWSIWSQWFCLLIC-VASIWIHNSLVA 367 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri-----GlvrtGl~~l~~Q~~~L~~~-v~s~~~~~~~~s 367 (473)
.....++++.|+|..++|..-.++...+ . .+++.++.+|+ |--|. |-+..|....... ...++.+....
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~-~~~~g~~~Dr~~~~~~Grr~~--~l~~~~~~~~~~~~~l~~~~~~~~l- 83 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLVGLPYS-L-KFLWSPLVDTVYLPFFGRRRS--WLVLTQVLLLSLLLILSFLVPSTDL- 83 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHH-H-HHHHHHHHhcccCCCCCccHH--HHHHHHHHHHHHHHHHHcCCcchhH-
Confidence 3567788889999999999965543333 3 55555666666 53333 3334444333322 22333221111
Q ss_pred HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 368 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 368 ~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
..+...++..+ ++-=..|.+..-++-|.+|++||+..+|.+.+-.++-.++.-.++..+
T Consensus 84 ~~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 84 PLLAGLAFLIA-FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222222 223356888888999999999999999999988888887766555433
No 100
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=96.34 E-value=0.13 Score=53.49 Aligned_cols=119 Identities=11% Similarity=-0.008 Sum_probs=78.2
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
...|+++.|+++.++|..-+...+.+..+.+...++.+|+|.-|.-.++......+...+........+.... +..-
T Consensus 36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~ 112 (402)
T TIGR00897 36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI---LLFY 112 (402)
T ss_pred HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH---HHHH
Confidence 4457778899999999999999999999999999999999998877666655544432221111111121111 1111
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
...-+|.=.+-.+..-.+.+.+|++|||+.+|.-++.+++-.
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 154 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGI 154 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 111223222233344566788999999999999888887764
No 101
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.30 E-value=0.12 Score=52.42 Aligned_cols=126 Identities=10% Similarity=-0.055 Sum_probs=81.6
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 371 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l 371 (473)
++.....+.++.|+++..+|..-+...+....+.....++.+|+|.-|.=+++.....+. +....+.+ + ...+
T Consensus 31 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~---~~~~~~~~-~---~~~l 103 (405)
T TIGR00891 31 VALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG---TLACGFAP-G---YITM 103 (405)
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---HHHHHHhc-c---HHHH
Confidence 333445555678999999999999999999999999999999999777544433222221 11112222 1 1122
Q ss_pred HhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 372 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 372 ~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
+.+-.+.-+|-=+++.+...++=|..|+++|+..+|..+...++-..+.-.+.
T Consensus 104 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 104 FIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333343345566666777889999999999998887777666555444
No 102
>PRK12382 putative transporter; Provisional
Probab=96.14 E-value=0.26 Score=50.61 Aligned_cols=130 Identities=15% Similarity=0.056 Sum_probs=79.0
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLM 372 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~ 372 (473)
.+.-|+.+ -|+|+..+|..=+...+....+.....++.+|+|.-|.=+.+......+....+...+.+.. ..+...++
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 34446654 59999999999999999999999999999999998876555544333222211112112211 11222222
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
.+-.+.-+|-=.+..+....++|.+|++||+...|....-.+....+.-.++
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 2222222221122344455778889999999999986655555555544443
No 103
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.13 E-value=1.9 Score=46.30 Aligned_cols=112 Identities=14% Similarity=0.057 Sum_probs=74.1
Q ss_pred HHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHh
Q 012017 296 MTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-AAYMLMV 373 (473)
Q Consensus 296 mtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s~~~l~~ 373 (473)
++.|.+. -|++..++..+-..-.+.++.|++++|+|-+|+|.-+.=..++.+ ..+.|+..++..++.. -.+.++.
T Consensus 275 ~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi---~~~~~~~~~~~~~~~~f~i~gll~ 351 (438)
T COG2270 275 GGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI---LSIAALYLIFLEGELDFWILGLLV 351 (438)
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH---HHHHHHHHHHccccHHHHHHHHHH
Confidence 6678884 699999999999999999999999999999999977654444432 3356667776654311 1112222
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST 415 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl 415 (473)
| +|==|.|+.- .-.+=+.||++|-|+++|.-+=.-..
T Consensus 352 g--~s~G~~qA~S---RSy~~~lvp~~k~~~fFglyaltgra 388 (438)
T COG2270 352 G--TSLGGAQASS---RSYLARLVPKGKEGRFFGLYALTGRA 388 (438)
T ss_pred H--HhcchHHHHH---HHHHHHhCCCccccceeehhhhhhhH
Confidence 2 2222223322 11444679999999998875544333
No 104
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.10 E-value=1.7 Score=47.29 Aligned_cols=290 Identities=17% Similarity=0.211 Sum_probs=140.1
Q ss_pred ccccccccchhHHHHHHHHHHhcCC----chhHHHHHHHHHHHHHHhhccceeecccccchhHH-HHHHHHhhhHHHHHH
Q 012017 6 GINCFGVCRMWEFSVGLYMISVWPD----SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKV-LQIWLVTQNLSFIVA 80 (473)
Q Consensus 6 ~~~c~~~dRmweFav~L~L~~l~p~----sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v-~~~~i~~Qn~sv~~s 80 (473)
|.-|++.+=+|.+. ..||...|+| +.-.++.-=++..+--++..|.+|-.+||.++... -|-+++.=-+..++.
T Consensus 18 g~gd~~~~~~~~~~-~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 18 GLGDFASNFAFGIV-VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred cchhhHHHHHHHHH-HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 33444434455543 4555656665 22333333345556667789999999999874332 444554444443333
Q ss_pred HHHHHHHHhhcc-cc-cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhH----
Q 012017 81 GVSVITLLFFSS-LK-STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRID---- 154 (473)
Q Consensus 81 ~~~~~~ll~~~~-~~-~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRID---- 154 (473)
+. +++..+ .. ..++....+...+. .++-...+|.-+ -|..+++.+ |++.+++|++=.=.-
T Consensus 97 ~~----l~F~~p~~~~~~k~~ya~vtY~l~-------~l~YT~vniPy~-al~~~iT~d--~~ER~~l~s~R~~~~~~g~ 162 (467)
T COG2211 97 AV----LLFITPDFSMTGKLIYALVTYMLL-------GLGYTLVNIPYG-ALGPEITQD--PQERASLTSWRMVFASLGG 162 (467)
T ss_pred HH----HHHcCCCcccCcchHHHHHHHHHH-------HHHHHheeCchh-hcchhhcCC--HHHHHHHHHHHHHHHHHHH
Confidence 33 222221 11 12322221222211 122333333332 245555555 357888888743332
Q ss_pred hhhhhhhhHHHHHHhhh---hhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccc
Q 012017 155 LTCKLLAPAITGFIISF---VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRE 231 (473)
Q Consensus 155 L~ckllaPl~vG~l~t~---~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (473)
+.+.++.|.+++.+-.- .++.... ..|.+.+.+.-+++...+.+++++=+ +. + ++
T Consensus 163 ~l~~~~~~plv~~~g~~~~~~g~~~~~---~~~~vi~~i~~l~~~~~v~ER~~~~~----~~-------~-~~------- 220 (467)
T COG2211 163 LLVAVLFPPLVKLFGGGDKALGYQGTA---LVLGVIGVILLLFCFFNVKERVVETQ----PT-------K-TG------- 220 (467)
T ss_pred HHHHHHHHHHHHHhCCCcchhhHHHHH---HHHHHHHHHHHHHHHHHhhcccCccc----cC-------c-cc-------
Confidence 33333333333333221 1333333 34445555566777777776654000 00 0 00
Q ss_pred cccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCch-hHHHHHHh-cCCCchH
Q 012017 232 RESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGT-LMTATLEW-EGIPAYI 309 (473)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~-lmtaYl~~-~G~s~~~ 309 (473)
.. +++ .+....-++.+-|+-=+...+++++....-+ .++=|... -|-++..
T Consensus 221 ----------~~----~~~-------------~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~ 273 (467)
T COG2211 221 ----------VK----LKL-------------KDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF 273 (467)
T ss_pred ----------cc----ccH-------------HHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH
Confidence 00 000 1112222333333333334444444433333 23333333 4666777
Q ss_pred HHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 012017 310 IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH 362 (473)
Q Consensus 310 ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~ 362 (473)
.+..-..+....+.+...+|++.||+|-.|.=.+++ ....+.++..++.|
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~---~~~~i~~~~~~f~~ 323 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL---LLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH---HHHHHHHHHHHhhc
Confidence 777777777777888999999999999887755542 22233444455555
No 105
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.03 E-value=0.55 Score=50.37 Aligned_cols=179 Identities=13% Similarity=0.169 Sum_probs=117.1
Q ss_pred hhcc-chhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHH
Q 012017 271 LKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 348 (473)
Q Consensus 271 ~~q~-vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q 348 (473)
+++| +++-+++..++|+-=-+-+.=.--|+++ +|+|....+..-++=-+.|+.||++.-++..|+--=|-|.-.+..
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~- 327 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF- 327 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH-
Confidence 5677 8999999999998745555556779997 799999999888888999999999999999988544444444333
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhhhhcchh--hhhhhhhhhhhccccCCCcccchhhhhHHHHHH--HHHHHHHhH
Q 012017 349 WFCLLICVASIWIHNSLVAAYMLMVGVATSRLGL--WMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST--MDLMAYTMG 424 (473)
Q Consensus 349 ~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GL--W~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl--f~ll~~v~~ 424 (473)
++.+.+|++.+|..... +. .+..+++.=+|. ++=++=+--.-=|.+|.+-.|+.+|.-.-..++ ..+-.+.++
T Consensus 328 ~~~i~~~~~~~w~~~~~-~~--~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 328 MLLITASLVLYWLAPNG-SY--LLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHHHHHHHHcCCCc-cH--HHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 34456777788874321 11 111122222222 222222222223778999999999999888888 344455566
Q ss_pred HhccCCCcchhH---HHHHHHHHHHHHHHHHHHHH
Q 012017 425 IIISNPQDFWKL---ILISVIVVTLAAILYTFHLY 456 (473)
Q Consensus 425 Ii~~~P~~F~~l---v~iS~~~V~~a~~~y~~~~~ 456 (473)
.+.-. |+|. +.++.+++.+.-.+...+.+
T Consensus 405 ~i~d~---~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 405 YIADT---WGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred eeEec---CCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 55533 6664 55666666666655555543
No 106
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.00 E-value=0.16 Score=52.26 Aligned_cols=139 Identities=7% Similarity=-0.024 Sum_probs=88.5
Q ss_pred HHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHh
Q 012017 296 MTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-SLVAAYMLMV 373 (473)
Q Consensus 296 mtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~-~~~s~~~l~~ 373 (473)
...|+++ .|.|+.++|..-+...+....+.....++.+|+|.-|.=+.+...-...-..+..+.+.++ ...+...++.
T Consensus 38 l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (399)
T PRK05122 38 LPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLL 117 (399)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Confidence 4456655 5999999999999999999999999999999999888766655543332222222222221 1122333333
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh-HHhccCCCcchhHH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM-GIIISNPQDFWKLI 437 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~-~Ii~~~P~~F~~lv 437 (473)
+-.+.-+|-=.++.+....+.|.+|+++||...|......++-..+...+ +.+.. +++|..
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~g~~~ 179 (399)
T PRK05122 118 GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH---WGGLAG 179 (399)
T ss_pred HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH---cccHHH
Confidence 32333333334566677778899999999999998777666665544443 34442 455544
No 107
>PRK10133 L-fucose transporter; Provisional
Probab=95.98 E-value=2.7 Score=44.61 Aligned_cols=79 Identities=8% Similarity=-0.151 Sum_probs=55.3
Q ss_pred hhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHHh--cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHH
Q 012017 268 QVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW--EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWS 344 (473)
Q Consensus 268 ~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~~--~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~ 344 (473)
+..+++|.+...+...++|.... +...-...|+.+ .|+++...|..-....+.++.|.+...++.+|+|..|.-.++
T Consensus 252 ~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~ 331 (438)
T PRK10133 252 SRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAY 331 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 34456676655544445554332 222234567643 599999999999999999999999999999999987765554
Q ss_pred HH
Q 012017 345 IW 346 (473)
Q Consensus 345 l~ 346 (473)
..
T Consensus 332 ~~ 333 (438)
T PRK10133 332 AL 333 (438)
T ss_pred HH
Confidence 33
No 108
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.97 E-value=0.1 Score=43.95 Aligned_cols=111 Identities=13% Similarity=0.114 Sum_probs=64.3
Q ss_pred HHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q 012017 318 ATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLV 397 (473)
Q Consensus 318 av~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V 397 (473)
.+.++.+....+++.+|+|..|.=..+......+.... .+.+ +.. .+.....+.-++.=..+-......+|..
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~---~~~~-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF---ALSS-NIT---VLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH---HHhc-cHH---HHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 44566778888888999997665444433333222211 1112 111 1111222222222234556667789999
Q ss_pred CCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchh
Q 012017 398 PESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWK 435 (473)
Q Consensus 398 ~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~ 435 (473)
|+++|++.+|..+..+++...+...+.-...+...+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 118 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRA 118 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHH
Confidence 99999999999999998888776655544443333333
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=95.96 E-value=0.37 Score=55.22 Aligned_cols=121 Identities=10% Similarity=0.002 Sum_probs=78.5
Q ss_pred hHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 012017 295 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 374 (473)
Q Consensus 295 lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~g 374 (473)
.+..+....|+++...|.+-+...+..+.|.+++.++..|+|.-+.=++++....++.+++ .+.++ ...++.+
T Consensus 189 ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~---afa~s----~~~llv~ 261 (742)
T TIGR01299 189 VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS---SFVQG----YGFFLFC 261 (742)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH---HHHhh----HHHHHHH
Confidence 3333445679999999999888888888999999999999998877666555443332222 22221 1122222
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
-.+.=+|.=+.-.+..-++-|..|+++||...|.......+-.++...
T Consensus 262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222322233466678888899999999998887777665555443
No 110
>PRK10054 putative transporter; Provisional
Probab=95.95 E-value=0.2 Score=52.11 Aligned_cols=125 Identities=17% Similarity=0.163 Sum_probs=84.2
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~ 373 (473)
.+..|+.+ .|+++..+|..-+...+.++.+.....++.+|+|.-|.=+++.....+. ++...+.++ .....+
T Consensus 29 ~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~--- 101 (395)
T PRK10054 29 FMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG---FIAIPLVNN-VTLVVL--- 101 (395)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH---HHHHHHHhH-HHHHHH---
Confidence 46678876 5999999999999999999999999999999999865544444333221 122222332 111111
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHh
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGII 426 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii 426 (473)
+...--.+.-.+.-+.+....|.+|+++|++..|..++..++.-.+...++-.
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 102 FFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111123345677788888899999999999999999998887766554433
No 111
>PRK03699 putative transporter; Provisional
Probab=95.89 E-value=0.31 Score=50.40 Aligned_cols=151 Identities=13% Similarity=0.082 Sum_probs=90.3
Q ss_pred HHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 012017 280 VSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI 359 (473)
Q Consensus 280 lalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~ 359 (473)
+++.+.....-+++..+..+.++-|+|+..+|..-+...+....+.+..+++.+|+|.-|.-.++.....+... ...
T Consensus 14 ~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~---l~~ 90 (394)
T PRK03699 14 LSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA---GLM 90 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH---HHH
Confidence 44444444444577777777788899999999998888888889999999999999988876665544332222 112
Q ss_pred hccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHH-HhHHhccCCCcchhHH
Q 012017 360 WIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY-TMGIIISNPQDFWKLI 437 (473)
Q Consensus 360 ~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~-v~~Ii~~~P~~F~~lv 437 (473)
+.++. ..-...++.|+..+ . ..-+.+.++.|..|+++||...+..++..++...+.- +.+.+.. +.++|-.
T Consensus 91 ~~~~~~~~~~~~~l~G~~~g-~----~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~gw~~ 163 (394)
T PRK03699 91 FSHSLALFSIAMFVLGVVSG-I----TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA--RSIEWYW 163 (394)
T ss_pred HcchHHHHHHHHHHHHHhhH-h----hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccHHH
Confidence 22221 11122233333221 1 1123445667778999999988887766666544333 2333332 2355654
Q ss_pred HHH
Q 012017 438 LIS 440 (473)
Q Consensus 438 ~iS 440 (473)
..-
T Consensus 164 ~f~ 166 (394)
T PRK03699 164 VYA 166 (394)
T ss_pred HHH
Confidence 433
No 112
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=95.86 E-value=0.27 Score=50.28 Aligned_cols=122 Identities=14% Similarity=0.100 Sum_probs=76.4
Q ss_pred hhHHHHHHhcCCCchH-----HHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHH
Q 012017 294 TLMTATLEWEGIPAYI-----IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVA 367 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~-----ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s 367 (473)
..+..|+++.|+++.. +|..-++..+.+..+.....++.+|+|.-|.-.++........... .+.++. ..-
T Consensus 35 ~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 111 (408)
T PRK09874 35 PFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM---GLAQNIWQFL 111 (408)
T ss_pred hhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH---HHHhhHHHHH
Confidence 3566788888888653 5888888888889999999999999997666554443333222211 111111 111
Q ss_pred HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 368 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 368 ~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
...++.|+.. |. + -.....+.+.+|+++||..+|..+...++-..+...++
T Consensus 112 ~~~~~~g~~~---~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 112 ILRALLGLLG---GF--V-PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHhh---hh--H-HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334321 21 2 33456778889999999999988777777665544444
No 113
>PRK10504 putative transporter; Provisional
Probab=95.84 E-value=0.15 Score=53.87 Aligned_cols=141 Identities=9% Similarity=-0.021 Sum_probs=86.1
Q ss_pred hhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 012017 276 VLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLIC 355 (473)
Q Consensus 276 flaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~ 355 (473)
+...++..+-+++.-.+...+..|.++.|.++...|..-+...+....+.....++.+|+|.-|.-+++...-..+...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 92 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC 92 (471)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 33444444444443344556777888899999999988877777777889999999999998777665544433333222
Q ss_pred HHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 356 VASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 356 v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
. +.++. ..-...++.|+..+=. + -...-.++|..|+++|++..|+.+...++--.+.-.++
T Consensus 93 ~---~~~~~~~l~~~~~l~g~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 93 A---LSGTLNELLLARVLQGVGGAMM--V---PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred H---HhCCHHHHHHHHHHHHhhhHHH--H---HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 1 22211 1111122223221111 1 12344567888999999999998888877766554443
No 114
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=95.66 E-value=0.21 Score=52.28 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=88.2
Q ss_pred chhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 012017 275 VVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLI 354 (473)
Q Consensus 275 vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~ 354 (473)
.+...+++.+-|+.-...+.......++-|+++..+|..-+...+....+.+...++.+|+|.-|.-..++....+....
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 89 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTA 89 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 34445555555655444433333223457999999999999888888888999999999999887655554443332222
Q ss_pred HHHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 355 CVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 355 ~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
+ -+.++. ..-..-++.|+..+= +=.+...+++|..|+++||...|..++..++-..+...++
T Consensus 90 ~---~~~~~~~~l~~~r~l~G~~~~~-----~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 90 T---MFATGPESLYLLRILVGIAEAG-----FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred H---HHhcCHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122221 111122233332221 1134456789999999999999999888887666655543
No 115
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.58 E-value=0.37 Score=52.08 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=87.6
Q ss_pred chhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh-----hhhhHHHHHHHHHHHHHHHH-HHHhhccchhH
Q 012017 293 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRTGLWSIWSQWFCLLIC-VASIWIHNSLV 366 (473)
Q Consensus 293 ~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri-----GlvrtGl~~l~~Q~~~L~~~-v~s~~~~~~~~ 366 (473)
.+.+..|+...|.+...+|.+-.++... .+.++..++..|+ |-.|. |-+..|....... ..++..|..
T Consensus 32 ~~~l~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~gpl~Dr~~~~~~Grrr~--~ll~~~i~~~~~~~~~a~~~~~~-- 105 (491)
T PRK11010 32 SGTLQAWMTVENIDLKTIGFFSLVGQAY--VFKFLWSPLMDRYTPPFLGRRRG--WLLATQLLLLVAIAAMGFLEPGT-- 105 (491)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCCchH--HHHHHHHHHHHHHHHHHHcCCcc--
Confidence 3467789999999999999985555443 5677777888888 64433 3334443332221 122322211
Q ss_pred HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHH
Q 012017 367 AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVT 445 (473)
Q Consensus 367 s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~ 445 (473)
+...+.....+..++-=..|....-+..|..|++|||..+|+...-.++--++.-.+.....+ ..++|-...-+.++.
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~-~~~GWr~~f~i~a~l 183 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD-RYLGWQGMYWLMAAL 183 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHH
Confidence 111111111111222226888888899999999999999999988888777766555544433 135666555444433
No 116
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=95.55 E-value=0.16 Score=53.37 Aligned_cols=122 Identities=13% Similarity=-0.006 Sum_probs=82.7
Q ss_pred HHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhh
Q 012017 299 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATS 378 (473)
Q Consensus 299 Yl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~S 378 (473)
+.+.-|.++..+|..-+.-.+....+...+.++.+|+|.-|.=+.+.....+....+. +.+ +...++.+-.+.
T Consensus 28 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~----~~~~l~~~~~~~ 100 (485)
T TIGR00711 28 IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG---VAP----NLELMIIFRVIQ 100 (485)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh---CcC----CHHHHHHHHHHH
Confidence 4455799999999999999999999999999999999977765555544333322221 122 122233333333
Q ss_pred cchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 379 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 379 R~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
-+|.=..+.+...++.|..|+++||...|...+...+...+...++-..
T Consensus 101 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 101 GFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI 149 (485)
T ss_pred HhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh
Confidence 3443345667778889999999999999988887777666555444333
No 117
>PRK03893 putative sialic acid transporter; Provisional
Probab=95.44 E-value=0.4 Score=50.79 Aligned_cols=129 Identities=12% Similarity=-0.081 Sum_probs=86.3
Q ss_pred HHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhc
Q 012017 300 LEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 379 (473)
Q Consensus 300 l~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR 379 (473)
.+.-|+++...|..-+...+....+.+...++.+|+|.-|.-+.+...... .++...+.+ + ...++.+-.+.-
T Consensus 47 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~---~~~~~~~~~-~---~~~l~~~~~l~G 119 (496)
T PRK03893 47 QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV---GTLACGFAP-G---YWTLFIARLVIG 119 (496)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH---HHHHHHHHh-H---HHHHHHHHHHHH
Confidence 345799999999999999998889999999999999987765555433222 222222222 1 122222222222
Q ss_pred chhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH
Q 012017 380 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 380 ~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv 437 (473)
+|.=+.+.+...+++|..|+++||...|...+.+++.-.+...+.-...+ .++|-.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~w~~ 175 (496)
T PRK03893 120 MGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP--VWGWRA 175 (496)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHH
Confidence 33334567777889999999999999999999888887777766655444 344443
No 118
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.22 E-value=0.6 Score=51.07 Aligned_cols=154 Identities=8% Similarity=-0.002 Sum_probs=95.0
Q ss_pred cCCchhHHHHHHhc-CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 012017 290 LSFGTLMTATLEWE-GIPAYIIGIARGISATIGIAATILYPILQSRI-STLRTGLWSIWSQWFCLLICVASIWIHNSLVA 367 (473)
Q Consensus 290 Lsf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri-GlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s 367 (473)
-+....+..|+.++ |+++...+..-+...+....+.+...++.+|+ |.-|+=+++...+.+..... .. .+.+. .
T Consensus 26 Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll--~~-~~~~~-~ 101 (493)
T PRK15462 26 YGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--GA-SEIHP-S 101 (493)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH--HH-hhcch-h
Confidence 34555678888774 99999999999998888899999999999999 98888777776655432211 11 11110 1
Q ss_pred HHHHHhhhhhhcchhhhhhhhhhhhhccccCCC--cccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH--HHHHHH
Q 012017 368 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES--DRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI--LISVIV 443 (473)
Q Consensus 368 ~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~--~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv--~iS~~~ 443 (473)
. +..++++.=+|.-.+--+..-++.|..|++ +|.+..+......|+...+...++-...+ .++|-. .++...
T Consensus 102 ~--~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~--~~Gw~~~F~iaaig 177 (493)
T PRK15462 102 F--LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE--EYSWAMGFGLAAVG 177 (493)
T ss_pred H--HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh--hhChHHHHHHHHHH
Confidence 1 111111111333333344455677777765 79999999999999887776655544433 344433 333333
Q ss_pred HHHHHHHH
Q 012017 444 VTLAAILY 451 (473)
Q Consensus 444 V~~a~~~y 451 (473)
...|...|
T Consensus 178 m~l~li~~ 185 (493)
T PRK15462 178 MIAGLVIF 185 (493)
T ss_pred HHHHHHHH
Confidence 34444444
No 119
>PRK12307 putative sialic acid transporter; Provisional
Probab=95.21 E-value=0.71 Score=47.77 Aligned_cols=123 Identities=10% Similarity=0.008 Sum_probs=79.8
Q ss_pred CCchhHHHHHH-----hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc-h
Q 012017 291 SFGTLMTATLE-----WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-S 364 (473)
Q Consensus 291 sf~~lmtaYl~-----~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~-~ 364 (473)
++|-.++.|+. +.|+++.+.|..-+...+..+.+.....++.+|+|.-+.=.++.....++...+. +.++ .
T Consensus 31 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~---~~~~~~ 107 (426)
T PRK12307 31 GFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG---LASGVI 107 (426)
T ss_pred HhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH---HHhHHH
Confidence 34444444443 5699999999999998888889999999999999987776666555443332211 1111 0
Q ss_pred hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHH
Q 012017 365 LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY 421 (473)
Q Consensus 365 ~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~ 421 (473)
..-..-++.|+..+ .+.-+...++.|..|+++|+..+|...+-.++-.++..
T Consensus 108 ~l~~~r~l~G~g~g-----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 159 (426)
T PRK12307 108 MLTLSRFIVGMGMA-----GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA 159 (426)
T ss_pred HHHHHHHHHHHHHh-----hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence 11122223332221 24455677888999999999999988776666655543
No 120
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=95.16 E-value=0.63 Score=46.70 Aligned_cols=134 Identities=16% Similarity=0.151 Sum_probs=85.0
Q ss_pred HHHHHHhhhcCCchhHHHHH-HhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 012017 281 SLALLFFTVLSFGTLMTATL-EWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI 359 (473)
Q Consensus 281 alalLY~TVLsf~~lmtaYl-~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~ 359 (473)
+..+=|++-..++.....|+ .+.|+|+..+|..-+...+....+.....++.+|+|.-|.=+++...-.++...+ .
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~---~ 85 (366)
T TIGR00886 9 GFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA---G 85 (366)
T ss_pred HHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH---H
Confidence 33333444445666666545 4579999999999999999999999999999999998776555544433322211 1
Q ss_pred hcc-ch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 360 WIH-NS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 360 ~~~-~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
+.+ +. ..-..-++.|+.. |. +. ..+.++-|..|++||+...+...+.+++-..+...+
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~---~~--~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 145 (366)
T TIGR00886 86 LAVQSYSVLLLLRLFIGIAG---GS--FA-SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFV 145 (366)
T ss_pred HHhhhHHHHHHHHHHHHHhc---hh--hH-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHH
Confidence 112 11 1112223334321 22 22 345567788899999999999888777776554333
No 121
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=95.13 E-value=5.8 Score=42.69 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=47.6
Q ss_pred HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCC-cchhHHHHHHHHH
Q 012017 366 VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQ-DFWKLILISVIVV 444 (473)
Q Consensus 366 ~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~-~F~~lv~iS~~~V 444 (473)
.|...++...++.=+|==....+...+.=+..|++.||+..|+......+-..+.=.+.-...+|. .-+....++....
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTL 458 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHH
Confidence 344444444444445544555555666667789999999999998766665555433333333442 2333344444444
Q ss_pred HHHHHH
Q 012017 445 TLAAIL 450 (473)
Q Consensus 445 ~~a~~~ 450 (473)
..|..+
T Consensus 459 ~~~~~~ 464 (475)
T TIGR00924 459 LVGVVM 464 (475)
T ss_pred HHHHHH
Confidence 444433
No 122
>PRK10091 MFS transport protein AraJ; Provisional
Probab=95.07 E-value=0.43 Score=49.08 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=83.5
Q ss_pred HHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc
Q 012017 284 LLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN 363 (473)
Q Consensus 284 lLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~ 363 (473)
+.......+.+.+..+.++-|+|+..+|..-+...+..+.+.....++.+|+|.-|.=..+......... ...+.++
T Consensus 14 ~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~---l~~~~~~ 90 (382)
T PRK10091 14 GLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA---MFTLSSS 90 (382)
T ss_pred HHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH---HHHHhCc
Confidence 3333333455567777778899999999999999999999999999999999976654444443322221 1222232
Q ss_pred h-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 364 S-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 364 ~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
. ..-..-++.|+..+= +--....+++|..|+++|+...|.-.+.+++...+-..++-..
T Consensus 91 ~~~l~~~r~l~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 91 YLMLAIGRLVSGFPHGA-----FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHhhhHH-----HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 1 111222233332221 1123344667788999999988887777777766644444333
No 123
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.07 E-value=1.1 Score=46.08 Aligned_cols=147 Identities=15% Similarity=0.072 Sum_probs=88.8
Q ss_pred ccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHH
Q 012017 273 QEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCL 352 (473)
Q Consensus 273 q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L 352 (473)
.|.++-.++-.+..+..-.....+..|+.+.|+|+.++|..-+...+....+.....++.+|+|.-|.=..+...-....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444433333322234456777888999999999999999999999999999999999998776555444322211
Q ss_pred HHHHHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 353 LICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 353 ~~~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
. ...+.++. ..-..-++.|+..+ .+=......+.+..|+++||...|.-.+..++--.+--.++-.+
T Consensus 86 ~---~~~~~~~~~~l~~~~~l~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 86 A---GLGLMVGFWSWLAWRFVAGIGCA-----MIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred H---HHHHhccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 11222321 11122233333222 11112234556778888999999887777777766655555444
No 124
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=95.01 E-value=0.93 Score=48.59 Aligned_cols=119 Identities=10% Similarity=0.009 Sum_probs=73.8
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~ 370 (473)
....+..+.+.-|++..++|..-+...+....+.++..++.+|+|.-+.-.++...-.++.. ...+.++. ..-..-
T Consensus 55 ~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~---~~~~~~s~~~l~~~r 131 (476)
T PLN00028 55 AAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVF---CMSLVSSATGFIAVR 131 (476)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH---HHHHhcCHHHHHHHH
Confidence 33444455556799999999887777777778899999999999987665554433222221 11222221 111222
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
++.|+..+ .+ ...+..+-|..|+++||..+|+-++..++...+
T Consensus 132 ~l~G~~~~-----~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~ 174 (476)
T PLN00028 132 FFIGFSLA-----TF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGV 174 (476)
T ss_pred HHHHHHHH-----hh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHH
Confidence 33444332 22 233446678899999999999998877765543
No 125
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.97 E-value=1.9 Score=46.85 Aligned_cols=166 Identities=14% Similarity=0.077 Sum_probs=89.9
Q ss_pred hHHHHHHHhhhcCCch-hHHHHHHhc-CCCchHHHHHhHHHHHHHhhH-HhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 012017 279 GVSLALLFFTVLSFGT-LMTATLEWE-GIPAYIIGIARGISATIGIAA-TILYPILQSRISTLRTGLWSIWSQWFCLLIC 355 (473)
Q Consensus 279 slalalLY~TVLsf~~-lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~g-T~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~ 355 (473)
.+.-.++|+...+-.. ...-|++.+ |.++...+-+-+.....+..+ .+..|.+++.+|.-+....+++.+..++..=
T Consensus 246 ~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~ 325 (463)
T KOG2816|consen 246 LLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLF 325 (463)
T ss_pred HHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHH
Confidence 5556666776654222 345567764 999999998888888888754 5677799999998776666777666554321
Q ss_pred HHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH-------HHhHHhcc
Q 012017 356 VASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-------YTMGIIIS 428 (473)
Q Consensus 356 v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~-------~v~~Ii~~ 428 (473)
..-|.+--.++...+... +++ -=.+.--..=..|+++|+|.+.++-.-++.+..++. |.++....
T Consensus 326 -af~~~~w~~~~~~v~~~~---~~~----~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~ 397 (463)
T KOG2816|consen 326 -AFATETWMMFAAGVVVAL---AGI----VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDL 397 (463)
T ss_pred -HHhccchhhhHHHHHHHh---hcc----hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 111111000111000000 000 000000111134899999999998877777765543 33444555
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHH
Q 012017 429 NPQDFWKLILISVIVVTLAAILYT 452 (473)
Q Consensus 429 ~P~~F~~lv~iS~~~V~~a~~~y~ 452 (473)
.+..|..-.............+|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~ 421 (463)
T KOG2816|consen 398 PGFLFVISSLVLPFAFLAAIPLLA 421 (463)
T ss_pred ccccccccchHHHHHHHHHHHHHH
Confidence 555555544433333333333333
No 126
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=94.92 E-value=0.54 Score=48.19 Aligned_cols=122 Identities=11% Similarity=0.053 Sum_probs=76.6
Q ss_pred HHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhc
Q 012017 300 LEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 379 (473)
Q Consensus 300 l~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR 379 (473)
.++.|.++..+|..-+...+....+.....++.+|+|.-|.=+.+...-.+ ......+.++ . ..++.+-.+.-
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i---~~~~~~~~~~-~---~~~~~~~~l~g 102 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII---ASLLCSLAET-S---SLFLAGRFLQG 102 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH---HHHHHHHhCc-H---HHHHHHHHHHH
Confidence 456799999999999998888888899999999999975543333322211 1111222221 1 11111111222
Q ss_pred chhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhcc
Q 012017 380 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIIS 428 (473)
Q Consensus 380 ~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~ 428 (473)
+|.=.++.....++-|..|+++|+...|.-+...++...+...++-..-
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222345556678888899999999999988888777666655554433
No 127
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=94.90 E-value=6.5 Score=42.05 Aligned_cols=304 Identities=13% Similarity=0.110 Sum_probs=150.6
Q ss_pred hhccceeecccccc------hhHHHHHHHHhhhHHHHHHHHHHHHHHhhc--ccccchhHHHHHHHHHHHHHHHHHHHHh
Q 012017 48 LFGPIVGHWVDKLT------YVKVLQIWLVTQNLSFIVAGVSVITLLFFS--SLKSTNFIAFVLLVILTNISGAVGVIST 119 (473)
Q Consensus 48 ~fg~~vG~~iD~~~------Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~--~~~~~~~~~~~~l~~l~~~~~~i~~Las 119 (473)
.+-+++|+.-|+++ |-+-+......|-...++..-..+ .+..+ +...+.|....+......+.|.--+.++
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~-~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALL-LLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHH-HHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 46789999999999 667777777777776444433322 22211 1111233332222222222221112222
Q ss_pred hh-hhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 012017 120 LA-GTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMS 198 (473)
Q Consensus 120 ~a-~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~ 198 (473)
+. .-...++ -.++++|...+-+=..| +.--+++.+.+|.++.-+|+.-=.-++....++.+.+-...+.+
T Consensus 108 T~~lALl~D~-----~~e~~R~~~v~ivw~Ml----i~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg 178 (403)
T PF03209_consen 108 TSFLALLADL-----APEERRPRVVAIVWVML----IVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG 178 (403)
T ss_pred HHHHHHHHhc-----CCHhhhhhhHHHHHHHH----HHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 1122222 11234443444444444 77888888888888776665332222233333333333333333
Q ss_pred HHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhh
Q 012017 199 VYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLP 278 (473)
Q Consensus 199 VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vfla 278 (473)
+.++.|.-+. +.++ + +....+.|++++++|--.-
T Consensus 179 ~E~r~~~~~~------------~~~~-------------------~---------------~~~f~~a~~~~~~~~~a~~ 212 (403)
T PF03209_consen 179 QEPRRSRRAA------------AAER-------------------P---------------RPPFREAWRQVWASPQARR 212 (403)
T ss_pred cccCCccccc------------CCCC-------------------C---------------CccHHHHHHHHHhCCChhH
Confidence 3333221110 0000 0 0011355667776663222
Q ss_pred hHHHHHHHhhhcCC---chhHHHHHHh-cCCCc---hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHH
Q 012017 279 GVSLALLFFTVLSF---GTLMTATLEW-EGIPA---YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFC 351 (473)
Q Consensus 279 slalalLY~TVLsf---~~lmtaYl~~-~G~s~---~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~ 351 (473)
=+...++. .++| |-+.=-|.-+ -|+|. +.+..+-+.|++.|+..+= -++.+|.|..|+..++...=..+
T Consensus 213 f~~fl~l~--t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g--~~l~~~~~~~~~a~~G~~~~~~~ 288 (403)
T PF03209_consen 213 FFVFLFLG--TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAG--FLLSRRLGKKRTAALGCLLGALA 288 (403)
T ss_pred HHHHHHHH--HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCCCchHHHHHHHHHHHHH
Confidence 22222222 2222 2233345444 36664 3788999999999996653 24667888888877776665555
Q ss_pred HHHHHHHhhcc-chhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHH
Q 012017 352 LLICVASIWIH-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 416 (473)
Q Consensus 352 L~~~v~s~~~~-~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf 416 (473)
+..-+.+-+.+ .......+++.|. |-=.|--+..-.|=+..++++.|..-|.-.+-|.+.
T Consensus 289 f~lii~a~~~~~~~~~~~~~~l~G~-----g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 289 FALIILAGPLGSPWLFRPGVFLLGL-----GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHH-----hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 54433333332 2233333444443 222334444455556667777888888877777765
No 128
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=94.80 E-value=0.82 Score=46.87 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=85.2
Q ss_pred CCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhh
Q 012017 305 IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWM 384 (473)
Q Consensus 305 ~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~ 384 (473)
.+....|..-+...+....+.....++.+|+|.-|.=+.+.........++.. .+.+ .+...++.+-.+.-+|.=.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~r~l~G~~~~~ 143 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGL---AAFA-LSVEMLIVGRVLLGIGVGI 143 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHH---hccc-cchHHHHHHHHHHHhhhhH
Confidence 45899999999999999999999999999999876655555443333332221 1111 1111222222222233223
Q ss_pred hhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH---HhccCCCcchhHHHH
Q 012017 385 FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG---IIISNPQDFWKLILI 439 (473)
Q Consensus 385 fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~---Ii~~~P~~F~~lv~i 439 (473)
+......++.|..|+++||...|..+...++-..+...++ ........+++.-.+
T Consensus 144 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 144 ASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 4455667889999999999999999888888888888877 444444445544444
No 129
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.72 E-value=0.39 Score=53.92 Aligned_cols=92 Identities=11% Similarity=0.108 Sum_probs=64.5
Q ss_pred cchhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHh-cCCCchHHHHHhHHHHH-HHhhHHhhHHHHHhhhhh--hh
Q 012017 265 GAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIARGISAT-IGIAATILYPILQSRIST--LR 339 (473)
Q Consensus 265 ~~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav-~Gl~gT~~~p~l~~riGl--vr 339 (473)
..++.-+++|.|........+...+ -++..-+-.|+.+ .|+++...|..-++..+ .++.|.++..++.+|++. .+
T Consensus 321 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~ 400 (633)
T TIGR00805 321 KIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKK 400 (633)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHH
Confidence 4456678889887776665555444 4677778889986 69999999999887666 457899999999999984 33
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012017 340 TGLWSIWSQWFCLLICV 356 (473)
Q Consensus 340 tGl~~l~~Q~~~L~~~v 356 (473)
.-.+.+....+.++..+
T Consensus 401 ~~~~~~~~~~~~~~~~~ 417 (633)
T TIGR00805 401 AAYFAICLSTLSYLLCS 417 (633)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444433333
No 130
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=94.70 E-value=0.87 Score=47.37 Aligned_cols=133 Identities=14% Similarity=0.036 Sum_probs=88.0
Q ss_pred hHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHh
Q 012017 295 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMV 373 (473)
Q Consensus 295 lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~ 373 (473)
+...+.++.|+++.++|..-+...+....+....+++.+|+|.-|.=.++.....+....+ .+.++. ..-..-++.
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~ 118 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV---SFANSFSLLLIGRACL 118 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH---HHHChHHHHHHHHHHH
Confidence 4556777889999999999999999999999999999999998887776666654432222 122211 111222333
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv 437 (473)
|+..+- +-.....++.|.+|+++|+...|...+-.++--++.-.++-... ++|+|-.
T Consensus 119 G~~~g~-----~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~--~~~gw~~ 175 (394)
T PRK10213 119 GLALGG-----FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG--ELIGWRN 175 (394)
T ss_pred HHhhHH-----HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcCHHH
Confidence 443322 11234456678899999999999998888877666555554443 3455543
No 131
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=94.57 E-value=1.2 Score=45.85 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=75.7
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVG 374 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~g 374 (473)
+..+.++.|+++.+++..-+...+....+.+...++.+|+|.-|.=+.+...-..+...+ .+.++. ..-..-++.|
T Consensus 36 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 36 MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI---LLAQSIEQFTLLRFLQG 112 (406)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHH
Confidence 344667789999999999888888888899999999999998776555543333222221 122211 1112223333
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
+..+ .+.......++|..|+++|++..|+-.+...+...+.-.+
T Consensus 113 ~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 156 (406)
T PRK15402 113 IGLC-----FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLV 156 (406)
T ss_pred hHhh-----hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 2234556677888999999998887776666555444333
No 132
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=94.47 E-value=1.2 Score=44.24 Aligned_cols=130 Identities=9% Similarity=-0.019 Sum_probs=76.5
Q ss_pred HHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 012017 280 VSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI 359 (473)
Q Consensus 280 lalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~ 359 (473)
+.+.+.+....+++.+...+.++-|+|+.++|..-+.-.+....+.....++.+|+|.-|.=..+.....+.. ....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~---~~~~ 86 (377)
T TIGR00890 10 VIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGF---TFYA 86 (377)
T ss_pred HHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHH---HHHH
Confidence 3333333333356666655666679999999999999999999999999999999997766444433322221 1111
Q ss_pred hccchhHH--HHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH
Q 012017 360 WIHNSLVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 360 ~~~~~~~s--~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
+.+ +... ..-++.|+..+ ..-.+....++|..| ++||...|...+..++-.++
T Consensus 87 ~~~-~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 141 (377)
T TIGR00890 87 IAD-SLAALYLTYGLASAGVG-----IAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI 141 (377)
T ss_pred HHH-HHHHHHHHHHHHhHHHH-----HHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH
Confidence 122 1111 11112333222 111223345566666 57999999888777665543
No 133
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=94.40 E-value=0.58 Score=49.53 Aligned_cols=119 Identities=10% Similarity=-0.106 Sum_probs=73.7
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 375 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi 375 (473)
...|+.+.|+++..+|..-+...+.-..+.....++.+|+|.-|.=+++...-.+.... ..+.+....+...++.+.
T Consensus 51 ~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF---MGFVPWATSSIAVMFVLL 127 (452)
T ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHH---HHhhhcccccHHHHHHHH
Confidence 45577767999999999999999998999999999999999877555444332222111 111110000111122222
Q ss_pred hhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 417 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ 417 (473)
.+.+++.=.+.......+.|..|+++||...|+.+.-.++..
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 222222212334455677788899999999998877776653
No 134
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=94.30 E-value=1.8 Score=45.58 Aligned_cols=123 Identities=9% Similarity=-0.009 Sum_probs=76.1
Q ss_pred cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH-hhc----cchhHHHHHHHhhhhh
Q 012017 303 EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWI----HNSLVAAYMLMVGVAT 377 (473)
Q Consensus 303 ~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s-~~~----~~~~~s~~~l~~gi~~ 377 (473)
.|.++.+.|..=+.-.+....+.+...++.+|+|--|.=+.+...-.++...+... ++. +++......++.+=.+
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 38888999998888888888999999999999998887666666544433332221 111 1112222222222222
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHH
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGI 425 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~I 425 (473)
.-+|.=..-....-++.|..|+++||...|....-..+--++.++.+.
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~ 177 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY 177 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222334557889999999999998877665555555555443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=94.28 E-value=0.78 Score=47.75 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=61.4
Q ss_pred hhhhccchhhhHHHHHHHhhhcC-CchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHH
Q 012017 269 VYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWS 344 (473)
Q Consensus 269 ~Y~~q~vflaslalalLY~TVLs-f~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~ 344 (473)
.++++|.+......-++|.-..+ +.+.+..|+++ .|+++.++|..-+...+....+.....++.+|+|.-|.-+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~ 82 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWI 82 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 35677777776555555555444 57788889998 799999999999999999999999999999999987765554
No 136
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.25 E-value=1.9 Score=43.68 Aligned_cols=79 Identities=11% Similarity=0.092 Sum_probs=60.1
Q ss_pred hhccchhhhHHHHHHHhhh-cCCchhHHHHHHhc---CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH
Q 012017 271 LKQEVVLPGVSLALLFFTV-LSFGTLMTATLEWE---GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 346 (473)
Q Consensus 271 ~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~~---G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~ 346 (473)
+++|.+.-++..-++|.-+ -+..+-+..|+.+. |+++..-+..=+........|.++.+++.+|+|..|.-.++..
T Consensus 137 ~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~ 216 (310)
T TIGR01272 137 FQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAF 216 (310)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3455455566666777754 47888899999853 9999999999888888888999999999999998776555544
Q ss_pred HHH
Q 012017 347 SQW 349 (473)
Q Consensus 347 ~Q~ 349 (473)
...
T Consensus 217 l~~ 219 (310)
T TIGR01272 217 LAV 219 (310)
T ss_pred HHH
Confidence 433
No 137
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=94.20 E-value=1.2 Score=48.03 Aligned_cols=151 Identities=10% Similarity=0.014 Sum_probs=87.3
Q ss_pred hhHHHHHHh---cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh-hhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012017 294 TLMTATLEW---EGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 369 (473)
Q Consensus 294 ~lmtaYl~~---~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r-iGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~ 369 (473)
+...-|+.+ .|+++...|..-+.-++.+..+.+...++..| +|.-|+=+++.....+.... .. +.++ ..
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~--~~-~~~~----~~ 103 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM--LA-MSIY----PD 103 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH--HH-hccc----Hh
Confidence 356778876 49999999999999999999999999999988 89988877766554332211 11 1221 11
Q ss_pred HHHhhhhhhcchhhhhhhhhhhhhccccCCC---cccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHH
Q 012017 370 MLMVGVATSRLGLWMFDLSVIQQMQDLVPES---DRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTL 446 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~---~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~ 446 (473)
.+..+.++.-+|-=.+.-+..-++=+..|++ +|+...+.-+...|+-..+...++-..-+-..+.+.-.++......
T Consensus 104 ~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 104 LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 2222333333332223333333332334433 5888888888888887777655543332211233333344444444
Q ss_pred HHHHH
Q 012017 447 AAILY 451 (473)
Q Consensus 447 a~~~y 451 (473)
+...|
T Consensus 184 ~~l~~ 188 (475)
T TIGR00924 184 GLLTF 188 (475)
T ss_pred HHHHH
Confidence 44333
No 138
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=94.13 E-value=1.6 Score=44.84 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=80.7
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhh
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVG 374 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~g 374 (473)
+..+.++.|+|+..+|..-+...+....+...+.++.+|+|.-|.=..+..........+ .+.++. ..-..-++.|
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g 107 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA---LFAHSLTVLIAASAIQG 107 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHH
Confidence 445667789999999999999999889999999999999998765444443322222211 112211 1112223333
Q ss_pred hhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHH
Q 012017 375 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVI 442 (473)
Q Consensus 375 i~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~ 442 (473)
+..+ ........+..|..|+++|+..++..+.-..+..++...++-...+ .++|-....+.
T Consensus 108 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~--~~g~~~~f~~~ 168 (394)
T PRK11652 108 LGTG-----VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT--LFGWRACYLFL 168 (394)
T ss_pred hhhh-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccChHHHHHHH
Confidence 3222 1223334455667788889988887766666666555444433332 34554433333
No 139
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=93.97 E-value=0.55 Score=49.89 Aligned_cols=153 Identities=10% Similarity=-0.058 Sum_probs=94.2
Q ss_pred hhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH
Q 012017 267 WQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 346 (473)
Q Consensus 267 w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~ 346 (473)
|+.++-+=..+..+++.+.|+.--.++..+-...++-|+++.++|..-+...+....+.....++.+|+|.-|.=..++.
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 44444444567777778888877777776666667779999999999888877777888899999999998775443332
Q ss_pred HHHH-HHHHHHH-HhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 347 SQWF-CLLICVA-SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 347 ~Q~~-~L~~~v~-s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
.-.+ +...+.. ..+.+ +...++..-.+..+|-=..=.+...++-|..|++|||...|+..+..++-..+.-.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 103 LSAICMLGFGASLGSGSV----SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 2111 1111111 11111 122222221122221111113455678899999999999999888777766665443
No 140
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=93.95 E-value=1.2 Score=47.76 Aligned_cols=119 Identities=8% Similarity=-0.037 Sum_probs=78.5
Q ss_pred CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHhhhhhhcch
Q 012017 304 GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN--SLVAAYMLMVGVATSRLG 381 (473)
Q Consensus 304 G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~--~~~s~~~l~~gi~~SR~G 381 (473)
..++...+..-+...+..+.+.+...++.+|+|--+.=.++.....++..++.. .+. +..+...++.+-.+.-+|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL---SPGSSPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH---ccCcccchHHHHHHHHHHHHHHH
Confidence 355667888889999999999999999999999877765555544443332222 121 111123333333333333
Q ss_pred hhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHH
Q 012017 382 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGI 425 (473)
Q Consensus 382 LW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~I 425 (473)
.=+.--...-++.|..|+++||...+.......+-.++...++.
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333446678899999999999999988888877776666554
No 141
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=93.79 E-value=2.3 Score=42.95 Aligned_cols=122 Identities=14% Similarity=0.112 Sum_probs=78.4
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-HHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~s~~~ 370 (473)
++..+-.+.++.|+|+.++|..-+...+....+....+++.+|+|.-|.=.++..........+ ..++.. .-...
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~ 94 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR----SAPGTALLFAGT 94 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH----HhccHHHHHHHH
Confidence 4556667777889999999999999999999999999999999998887666655433222211 222211 11112
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
++.|+..+ ..+.+...++.|..| ++||...|.-+..+++--.+...+
T Consensus 95 ~~~g~g~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~ 141 (355)
T TIGR00896 95 ALIGVGIA-----IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAA 141 (355)
T ss_pred HHHHHHHH-----HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHH
Confidence 22232221 122334445556555 589999999888877766554433
No 142
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.45 E-value=13 Score=39.83 Aligned_cols=174 Identities=18% Similarity=0.212 Sum_probs=91.1
Q ss_pred hhhhhcc-chhhhHHHHHHHhhhcCCchhHHHHHHh--cC---CCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHH
Q 012017 268 QVYLKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW--EG---IPAYIIGIARGISATIGIAATILYPILQSRISTLRTG 341 (473)
Q Consensus 268 ~~Y~~q~-vflaslalalLY~TVLsf~~lmtaYl~~--~G---~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtG 341 (473)
...+++| ++.+.+-+-++|....+.+.-+.-|..+ -+ +++..+|..+-+|++.++.|+++|....++...-+.=
T Consensus 209 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~ 288 (433)
T PF03092_consen 209 WRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIF 288 (433)
T ss_pred HHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 3344445 5555552233333333333322233332 45 8999999999999999999999999998888743331
Q ss_pred HHHHHHHHHHHHHHHHHhh----ccchhHHHHHHHhhhhhhcchhhhhhhhhhhhh------------ccccCCCcccch
Q 012017 342 LWSIWSQWFCLLICVASIW----IHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQM------------QDLVPESDRCVV 405 (473)
Q Consensus 342 l~~l~~Q~~~L~~~v~s~~----~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~------------Qe~V~e~~Rg~v 405 (473)
.+ ..+..++.+.. +.+ ++.. .|| -.+ =.|.-|=...+.. =|.-|+..-|++
T Consensus 289 ~~------t~~~~~~~~l~~~~lv~~--~n~~---~Gi-~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~ 355 (433)
T PF03092_consen 289 VV------TTLVSVLASLFDLLLVTR--WNLD---LGI-PDQ-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTV 355 (433)
T ss_pred HH------HHHHHHHHhcccEEEEEE--Eeee---eCc-CCe-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHH
Confidence 11 22222222111 000 0000 000 000 0111122222111 133688888999
Q ss_pred hhhhHHHHHHHHHHHHHhHHhcc--------CCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012017 406 GGVQNSLQSTMDLMAYTMGIIIS--------NPQDFWKLILISVIVVTLAAILYTFHL 455 (473)
Q Consensus 406 ~gvq~Sl~slf~ll~~v~~Ii~~--------~P~~F~~lv~iS~~~V~~a~~~y~~~~ 455 (473)
.|+-.|..|+....+-.++-.+- +=++-++++++....- ...+.+..++
T Consensus 356 yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~-ll~l~ll~lL 412 (433)
T PF03092_consen 356 YALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ-LLPLPLLFLL 412 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH-HHHHHHHHHc
Confidence 99999999999877666554332 2233556666655544 4444454443
No 143
>PRK11043 putative transporter; Provisional
Probab=93.40 E-value=1.9 Score=44.35 Aligned_cols=116 Identities=10% Similarity=-0.010 Sum_probs=70.3
Q ss_pred HHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhhhhh
Q 012017 299 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVAT 377 (473)
Q Consensus 299 Yl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~ 377 (473)
+.++.|.++..+|..-++..+....+.+...++.+|+|.-|.=..+...-..+ +....+.++. ..-...++.|+..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~l~G~~~ 108 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG---SLGMLWVESAAQLLVLRFVQAVGV 108 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHhhh
Confidence 44567999999999999999999999999999999999877644443322221 1122222221 1111122223221
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHH
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
+ ......+.++.|..|+++|+...+.-++..++...+...
T Consensus 109 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 109 C-----SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred H-----HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122334556778889988888777766665555444433
No 144
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=93.32 E-value=1.4 Score=51.96 Aligned_cols=115 Identities=9% Similarity=-0.017 Sum_probs=75.7
Q ss_pred hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhh
Q 012017 308 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDL 387 (473)
Q Consensus 308 ~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL 387 (473)
..+|..-++-.+..+.++..+.++..|+|--|.-+++.....+..+......+.+. ...++.+.++.-+|-=.+..
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~~~~~~~ 122 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW----FWLAFAVTFLLGAQSAIYSP 122 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc----HHHHHHHHHHHHHHHHhhch
Confidence 34566666666667788888899999999888777777666555444443333322 12222222222222223444
Q ss_pred hhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHh
Q 012017 388 SVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGII 426 (473)
Q Consensus 388 ~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii 426 (473)
+..-++.|.+|+++|+..+|......++.-++...++-.
T Consensus 123 ~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~ 161 (1146)
T PRK08633 123 AKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSF 161 (1146)
T ss_pred HHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 555688899999999999999999999888877766543
No 145
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=92.92 E-value=2.7 Score=35.05 Aligned_cols=125 Identities=17% Similarity=0.228 Sum_probs=68.1
Q ss_pred HHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHhhh
Q 012017 43 SASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGV-ISTLA 121 (473)
Q Consensus 43 ~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~-Las~a 121 (473)
....++.++..|.+.||..|.+.........-+. . +.+.. . ++...+.+... +.+.... .....
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~----~---~~~~~-~----~~~~~~~~~~~---~~g~~~~~~~~~~ 72 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLS----T---AMFAL-S----SNITVLIIARF---LQGFGAAFALVAG 72 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHH----H---HHHHH-h----ccHHHHHHHHH---HHHHHHHHHHHhH
Confidence 3456778899999999999988765543322211 1 11111 1 12222211111 1121111 11222
Q ss_pred hhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHH
Q 012017 122 GTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWV 191 (473)
Q Consensus 122 ~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 191 (473)
.....| + .++ +...+.|+...-.......++|.+.|.+.+..+............+.+...
T Consensus 73 ~~~~~~--~----~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 73 AALIAD--I----YPP---EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHH--H----CCh---hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 222222 1 111 346777888888888999999999999988767665555555555555443
No 146
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=92.16 E-value=3.5 Score=43.38 Aligned_cols=128 Identities=11% Similarity=0.074 Sum_probs=91.5
Q ss_pred CchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012017 292 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~ 370 (473)
..+.....++ .-|+|+.+.|..-....+..+.+....+++.+|+|.-|+-..+........... .+.+ ...+...
T Consensus 21 ~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~---~~~~-~~~~~~~ 96 (410)
T TIGR00885 21 ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLF---WPAA-EIMNYTL 96 (410)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH---HHHH-hhccHHH
Confidence 3333344444 469999999999999999999999999999999998777666665433322211 1111 1123445
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
++.+..+..+|.=.++-+..-.+++..|+++|++..+.-++.+++-..+...+
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777888878888888888888999999998888888888777665544
No 147
>PF12832 MFS_1_like: MFS_1 like family
Probab=92.10 E-value=0.62 Score=38.01 Aligned_cols=59 Identities=22% Similarity=0.338 Sum_probs=48.5
Q ss_pred HHhhhcC-CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH
Q 012017 285 LFFTVLS-FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 343 (473)
Q Consensus 285 LY~TVLs-f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~ 343 (473)
+|+..+| +-+-..-|+++.|+|+.++|+..++.-++++.++.+..++.+|.|-.|.-+.
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 3444332 4445667999999999999999999999999999999999999998876554
No 148
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=91.86 E-value=3.4 Score=42.95 Aligned_cols=138 Identities=15% Similarity=0.077 Sum_probs=83.9
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch--hHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS--LVAAY 369 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~--~~s~~ 369 (473)
|+..+....++-|+|+.++|..-+.-.+....+.+...++.+|+|. |.-++....= ...+......+.+ ..-..
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~gr-r~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFK-RWFLFGSLAT---FAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHH---HHHHHHHHHHhccHHHHHHH
Confidence 4455666666779999999998777677677888889999999994 4333322111 1111111111111 11222
Q ss_pred HHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHH
Q 012017 370 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISV 441 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~ 441 (473)
-++.|+.. |.+ ......+.|..|++||++..|+-.+-+++--++...++-..- ++++|-...-+
T Consensus 86 R~l~G~g~---~~~---~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~--~~~gWr~~f~~ 149 (368)
T TIGR00903 86 QLLAALGQ---PFL---LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY--TAGGLQLLIIP 149 (368)
T ss_pred HHHHHhHh---HHH---HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccchHHHHHH
Confidence 23334332 221 334445578899999999999888888888887776665543 35777754433
No 149
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=91.79 E-value=9.2 Score=39.61 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=82.7
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYM 370 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~ 370 (473)
++..+.....+-|+|..++|..=+.-.+....+....+++.+|+|.-|+-+++...-..+...+.. .++. ..-..-
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~---a~~~~~ll~~r 104 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL---YPQSALLLSSA 104 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH---CcchHHHHHHH
Confidence 445555555667999999999999888888899999999999999999988888776655554432 2221 122223
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHH
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY 421 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~ 421 (473)
++.|+..+ ....+...++++..| ++|+.++|...+-.+.--.+--
T Consensus 105 ~l~Gig~~-----~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 105 LLGGVGIG-----IIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred HHHHhHHH-----HHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 34444433 344455566777766 7899999988776655444433
No 150
>PRK03545 putative arabinose transporter; Provisional
Probab=91.77 E-value=3.4 Score=42.44 Aligned_cols=131 Identities=11% Similarity=0.012 Sum_probs=77.8
Q ss_pred HHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhh
Q 012017 298 ATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVAT 377 (473)
Q Consensus 298 aYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~ 377 (473)
.+.++-|+|+..+|..=+...+....+......+.+|+|.-|.=..+...-. +.++...+.++ ... ++.+-..
T Consensus 34 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~~-~~~---l~~~r~~ 106 (390)
T PRK03545 34 DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI---ASHVLSALAWN-FTV---LLISRIG 106 (390)
T ss_pred HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH---HHHHHHHHhcc-HHH---HHHHHHH
Confidence 3455679999999998888877767777777899999998765444433221 22222222332 111 1111111
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv 437 (473)
.-+|-=.+--...-++-+..|++||+...|+..+.+++...+...++-... +.++|-.
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~--~~~gw~~ 164 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG--QYLGWRT 164 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH--HHhcHHH
Confidence 111110112234456778889999999999998888888777655543322 3456543
No 151
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=91.70 E-value=3.4 Score=41.44 Aligned_cols=46 Identities=20% Similarity=0.127 Sum_probs=38.2
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRT 340 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrt 340 (473)
.+.-|+.+ -|.|+..+|..-+...+.+........++.+|+|.-|.
T Consensus 19 ~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~ 65 (375)
T TIGR00899 19 TLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG 65 (375)
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence 44557765 59999999999999999889888888899999997654
No 152
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=91.25 E-value=3.4 Score=45.30 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=59.7
Q ss_pred cchhhhhhcc-chhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhh
Q 012017 265 GAWQVYLKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRIS 336 (473)
Q Consensus 265 ~~w~~Y~~q~-vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riG 336 (473)
.++++=++.| +++-++.+.+...+==+|..-..-|+++ .|+|+...+.+-..-.+.|+.+++++..+..|+.
T Consensus 264 ~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 264 KGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 5666677777 6666676666666544688888899999 6799999999999999999999999999999986
No 153
>PTZ00207 hypothetical protein; Provisional
Probab=90.82 E-value=4.3 Score=45.52 Aligned_cols=119 Identities=15% Similarity=0.194 Sum_probs=76.3
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh--hccchhHHHHHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI--WIHNSLVAAYML 371 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~--~~~~~~~s~~~l 371 (473)
.....+++ -|++...++..-++|...|. ..+.+.++..|+|.-+.=+++...-.+.-..+..++ ...++ ...+
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~~~g~-~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l 123 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGIAVGY-FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRL 123 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHH
Confidence 34445554 59999999999888888775 455578889999988776665543332222111110 01122 2222
Q ss_pred HhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHH
Q 012017 372 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 418 (473)
Q Consensus 372 ~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~l 418 (473)
....++.-+|-=.+|.+....+.++.| ++||.+.|+-.+...+-..
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 222333335666678888888888876 6899999999988888774
No 154
>PRK09952 shikimate transporter; Provisional
Probab=90.70 E-value=7.4 Score=41.05 Aligned_cols=98 Identities=8% Similarity=-0.004 Sum_probs=55.0
Q ss_pred HHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch----hHHHHHHHhhhhhhcchhhhhhhhhhhhhcc
Q 012017 320 IGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 395 (473)
Q Consensus 320 ~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~----~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe 395 (473)
.-..|.+++.++-+|+|.-|.=++++..-..+ ++...+.|+- ..+...++.+=.+.-+|.=+.--+...++-|
T Consensus 76 ~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 76 FRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIA---TALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHhhHHHHHHHHHHhhccHHHHHHHHHHHHHH---HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 34477788899999999877655554443332 2222333321 1122222222222222222222345678889
Q ss_pred ccCCCcccchhhhhHHHHHHHHHHH
Q 012017 396 LVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 396 ~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
..|+++||..++....-..+--++.
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999998887766666555554
No 155
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=90.29 E-value=5.6 Score=41.35 Aligned_cols=119 Identities=12% Similarity=0.045 Sum_probs=85.4
Q ss_pred HHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhh
Q 012017 298 ATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVAT 377 (473)
Q Consensus 298 aYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~ 377 (473)
.+.++.|.++..+|..-+...+..........++.+|+|.-|.=+++...+......+.. .+.+ -..-++.|
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~---~~~~--~~~r~l~G--- 99 (393)
T PRK11195 28 ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF---GIHP--LLAYGLVG--- 99 (393)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH---HHHH--HHHHHHHH---
Confidence 346677888889999888888888888888889999999988877777766543332211 1111 11112333
Q ss_pred hcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHh
Q 012017 378 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGII 426 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii 426 (473)
+|-=.+.-+..-++-|.+||+||++.+|.-....++-..+-..++-+
T Consensus 100 --~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 100 --IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred --HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34447777888899999999999999999888888777766555533
No 156
>TIGR00898 2A0119 cation transport protein.
Probab=89.96 E-value=5.1 Score=42.59 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=81.3
Q ss_pred cCCC---chHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhc
Q 012017 303 EGIP---AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 379 (473)
Q Consensus 303 ~G~s---~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR 379 (473)
-|++ +...|..-++..+..+.|.+++.++.+|+|.-|.-+++.....++... ..+.++ . ..++.+-.+.=
T Consensus 119 ~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~---~~~~~~-~---~~~~~~r~l~G 191 (505)
T TIGR00898 119 WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVL---TAFSPN-Y---TVFLVFRLLVG 191 (505)
T ss_pred ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHH---HHHccc-H---HHHHHHHHHHH
Confidence 4666 788888888888888999999999999999877766655554433322 223332 1 11222222222
Q ss_pred chhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHH
Q 012017 380 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILIS 440 (473)
Q Consensus 380 ~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS 440 (473)
+|.=+.-.....++-|.+|+++|+...+.-.....+-.++...++....+ ..++.++.
T Consensus 192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~ 249 (505)
T TIGR00898 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAV 249 (505)
T ss_pred hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHH
Confidence 33334445566678899999999999988766666666665555555443 44444433
No 157
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=89.94 E-value=2.8 Score=44.25 Aligned_cols=116 Identities=10% Similarity=0.030 Sum_probs=74.7
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-cchh--HHHHHHHhhhhhh
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HNSL--VAAYMLMVGVATS 378 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~-~~~~--~s~~~l~~gi~~S 378 (473)
+.|+++...|.+-+.-.+..+.+.+...++.+|+|.-+.-.++...-... +....+. ..+. .-..-++.|+..+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~---~~~~~~~~~~~~~~l~~~r~~~G~~~~ 146 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI---SIVIPWAAGGGIALVVFCRVIQGLAQG 146 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH---HHHHHHHHHcCchHHHHHHHHHHHhcc
Confidence 45889999999999999999999999999999999776555443321111 1111111 0011 1111222232221
Q ss_pred cchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHH
Q 012017 379 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGI 425 (473)
Q Consensus 379 R~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~I 425 (473)
..-.+...++.|..|++||+..+|...+-.++-..+...+.-
T Consensus 147 -----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~ 188 (465)
T TIGR00894 147 -----SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISG 188 (465)
T ss_pred -----cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122356678899999999999999999988887776665543
No 158
>PRK15011 sugar efflux transporter B; Provisional
Probab=89.84 E-value=7.8 Score=40.00 Aligned_cols=146 Identities=16% Similarity=0.164 Sum_probs=72.9
Q ss_pred chhhhHHHHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHh-hHHhhHHHHHhhhhhhhHHHHHHHHHHHHH
Q 012017 275 VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGI-AATILYPILQSRISTLRTGLWSIWSQWFCL 352 (473)
Q Consensus 275 vflaslalalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl-~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L 352 (473)
+|+.+++.++.+ +.+--|+++ -|+++..+|..-+...+.+. .+.+...+ .+|+|..|.-+..... ...
T Consensus 24 ~~~~~~~~~~~~-------p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~--~~~ 93 (393)
T PRK15011 24 AFLTGIAGALQT-------PTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCL--LGV 93 (393)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHH--HHH
Confidence 555555555533 346667766 49999999998776666555 45555555 7888987764332211 111
Q ss_pred HHHHHHhhccchhHHHHHHHhhhhhhcchhhh-hhhhhhhhhccccCCCcc--cchhhhhHHHHHHHHHHHHHhHHhccC
Q 012017 353 LICVASIWIHNSLVAAYMLMVGVATSRLGLWM-FDLSVIQQMQDLVPESDR--CVVGGVQNSLQSTMDLMAYTMGIIISN 429 (473)
Q Consensus 353 ~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~-fDL~v~qi~Qe~V~e~~R--g~v~gvq~Sl~slf~ll~~v~~Ii~~~ 429 (473)
+.+....+.+ +... +++.++... |+.+ ......-+..+..|+++| +..+|..++.+++--.+--.++-...
T Consensus 94 ~~~~~~~~~~-~~~~--l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~- 167 (393)
T PRK15011 94 LACTLFAWNR-NYFV--LLFVGVFLS--SFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA- 167 (393)
T ss_pred HHHHHHHHhh-HHHH--HHHHHHHHH--HHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH-
Confidence 1111111122 1111 112222221 2222 233334445555555544 34556666666666555555554332
Q ss_pred CCcchhHH
Q 012017 430 PQDFWKLI 437 (473)
Q Consensus 430 P~~F~~lv 437 (473)
++|+|-.
T Consensus 168 -~~~gw~~ 174 (393)
T PRK15011 168 -MGFSFTV 174 (393)
T ss_pred -HhcChHH
Confidence 2455554
No 159
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=89.13 E-value=7.6 Score=39.86 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=62.2
Q ss_pred HHHHHHHhhh---cCCc-hhHHHHHHhcCCCchHHHHHh--HHHHHHHhhHHhhH-HHHHhhhhhhhHHHHHHHHHHHHH
Q 012017 280 VSLALLFFTV---LSFG-TLMTATLEWEGIPAYIIGIAR--GISATIGIAATILY-PILQSRISTLRTGLWSIWSQWFCL 352 (473)
Q Consensus 280 lalalLY~TV---Lsf~-~lmtaYl~~~G~s~~~ig~~R--g~gav~Gl~gT~~~-p~l~~riGlvrtGl~~l~~Q~~~L 352 (473)
+.++.||++= .++- +.+-.|++++|+|+.+||.+- ++..+.-+...-+- .+..+|.|..|. |-+..|....
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~--~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS--WVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh--HHHHHHHHHH
Confidence 5667788772 2322 356679999999999999983 33344443322222 223445776665 4444554322
Q ss_pred -HHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHH
Q 012017 353 -LICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSL 412 (473)
Q Consensus 353 -~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl 412 (473)
.......+.+...... .++....+.=+.-=..|.....+.-|..++++++..++.+..=
T Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g 141 (390)
T TIGR02718 82 ACLASLALVGPDVAGAG-WAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAG 141 (390)
T ss_pred HHHHHHHcCCcchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHH
Confidence 2222222222211111 1111111111111123443333444556666777777666543
No 160
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=88.95 E-value=21 Score=38.34 Aligned_cols=163 Identities=12% Similarity=0.091 Sum_probs=88.6
Q ss_pred CchhHHHHHH----hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-H
Q 012017 292 FGTLMTATLE----WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-V 366 (473)
Q Consensus 292 f~~lmtaYl~----~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~ 366 (473)
||.+...|.+ +++.++..+|..-+++++.|...=+..|++.+|+|.-+.=+++-.. .++-... +-+.+++. +
T Consensus 239 fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i--~~iRi~~-~~~~~~~~~i 315 (412)
T PF01306_consen 239 FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVI--MAIRIIG-SGFATNPWVI 315 (412)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH--HHHHHHH-HHT--SHHHH
T ss_pred HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHH--HHHHHHH-HhhhcchHHH
Confidence 7777766665 5678889999999999999999999999999999976542221111 1111111 11222221 1
Q ss_pred HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhh--hHHHHHHHHHHHHHhHHhccCCCcchh-HHHHHHHH
Q 012017 367 AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGV--QNSLQSTMDLMAYTMGIIISNPQDFWK-LILISVIV 443 (473)
Q Consensus 367 s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gv--q~Sl~slf~ll~~v~~Ii~~~P~~F~~-lv~iS~~~ 443 (473)
+..=++=|+ -++ .+=++.-+.+++..|++-..+...+ |.+.|=---+++...+... +++|. .+..-.+.
T Consensus 316 ~~~klLH~~---e~~--l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly---d~~G~~~tylimg~ 387 (412)
T PF01306_consen 316 SLIKLLHAL---EFP--LLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY---DRIGFQHTYLIMGL 387 (412)
T ss_dssp HHHHHHHHH---HHH--HHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHH--HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH---hhcCcHHHHHHHHH
Confidence 111111111 000 1234577888888887643333332 3333433344555555555 55653 34444555
Q ss_pred HHHHHHHHHHHH-HHhhCCccCh
Q 012017 444 VTLAAILYTFHL-YRIRKHLFHF 465 (473)
Q Consensus 444 V~~a~~~y~~~~-~~~rghl~h~ 465 (473)
+.....++..|. +|.++|.+|-
T Consensus 388 iv~~~~li~~f~l~~~~~~~~~~ 410 (412)
T PF01306_consen 388 IVLPFTLISAFTLKKDKKQIVHP 410 (412)
T ss_dssp HHHHHHHHHHHHS--SSSTTCCC
T ss_pred HHHHHHHHheeeecCCCcccccC
Confidence 555566676664 5677777774
No 161
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=88.83 E-value=14 Score=38.81 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=70.9
Q ss_pred HHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch----hHHHHHHHhhhhhhcchhhhhh
Q 012017 311 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVGVATSRLGLWMFD 386 (473)
Q Consensus 311 g~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~----~~s~~~l~~gi~~SR~GLW~fD 386 (473)
+..=+.+.+....|.+++.++.+|+|.-|+=.+++..-...-.. ..+.|+- ..+...++..=.+.-+|.=+.-
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~ 142 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLV---IACLPGYETIGTWAPALLLLARLFQGLSVGGEY 142 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH---HhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhH
Confidence 33335566655688999999999999888766655544322222 2122321 1122222222222222221223
Q ss_pred hhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhcc----CC--CcchhHHHHHHH
Q 012017 387 LSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIIS----NP--QDFWKLILISVI 442 (473)
Q Consensus 387 L~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~----~P--~~F~~lv~iS~~ 442 (473)
-+...++-|..|+++||...++....++.--++...+..+.. +. .+++|-...=+.
T Consensus 143 ~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~ 204 (432)
T PRK10406 143 GTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALG 204 (432)
T ss_pred hhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHH
Confidence 355678889999999999988877666655555444332222 11 257776544333
No 162
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=88.38 E-value=11 Score=38.82 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=48.9
Q ss_pred HHHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHH
Q 012017 282 LALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 345 (473)
Q Consensus 282 lalLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l 345 (473)
..+.|+.-=.+...+..|+.+ .|+++.++|+.-++..+....+.....++.+|+|.-|.=++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~ 75 (396)
T TIGR00882 11 FFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII 75 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 333443322344567788887 5999999999999999999999999999999999766544433
No 163
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=88.32 E-value=12 Score=37.20 Aligned_cols=126 Identities=12% Similarity=0.037 Sum_probs=66.5
Q ss_pred HHHHHHhcCCC---chHHHHHhHHHH-----HHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh--
Q 012017 296 MTATLEWEGIP---AYIIGIARGISA-----TIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-- 365 (473)
Q Consensus 296 mtaYl~~~G~s---~~~ig~~Rg~ga-----v~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-- 365 (473)
+..|+.++.+. +..+|..-+.+. +....+.++..++.+|+|.-|.=+.+.....++...+ .+.++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~---~~~~~~~~~ 91 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI---GLLPSYATI 91 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH---hhCCChhhh
Confidence 44455555433 555655444432 2234567888999999998777665554443332222 2222110
Q ss_pred --HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 366 --VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 366 --~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
.....++.+-.+.=+|.=..+-+...++-|..|+++||...+.......+--++.-.++
T Consensus 92 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 92 GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111111112333455677888999999999988887777666555444
No 164
>PRK10133 L-fucose transporter; Provisional
Probab=87.78 E-value=9.2 Score=40.60 Aligned_cols=126 Identities=14% Similarity=0.067 Sum_probs=84.0
Q ss_pred hhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 012017 294 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373 (473)
Q Consensus 294 ~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~ 373 (473)
.....+-..-|+++.+.|..-+.-.+.-..+.....++.+|+|.-|+=.+++..-.+...++....+.++ ...++.
T Consensus 47 ~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~----~~~ll~ 122 (438)
T PRK10133 47 ILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN----YTLFLV 122 (438)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCC----HHHHHH
Confidence 3444454457999999999999999988999999999999999888877777665555444322222222 233444
Q ss_pred hhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHh
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 423 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~ 423 (473)
+..+.-+|.=..|.+...++.+..|+++|+...+.-.+.+++--.+..++
T Consensus 123 ~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 123 GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455557888888888876666666655555555555555555444
No 165
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=87.18 E-value=14 Score=39.81 Aligned_cols=148 Identities=14% Similarity=0.042 Sum_probs=81.6
Q ss_pred HHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHhhhhh
Q 012017 299 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAAYMLMVGVAT 377 (473)
Q Consensus 299 Yl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~-~s~~~l~~gi~~ 377 (473)
+..+-|.++..++..-+.-.+....+...+.++.+|+|.-|.=+++.....+....|. +.++.. .-..-++.|+..
T Consensus 32 i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~---~a~~~~~li~~r~l~G~g~ 108 (495)
T PRK14995 32 LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA---FSPTASWLIATRALLAIGA 108 (495)
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHH
Confidence 3445578888888777666666566677888999999987776665554443333322 222211 111112233322
Q ss_pred hcchhhhhhhhhhhhh-ccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012017 378 SRLGLWMFDLSVIQQM-QDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFH 454 (473)
Q Consensus 378 SR~GLW~fDL~v~qi~-Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~ 454 (473)
+ .+-.+...++ ++..|+++|+...|+-.+..++-..+--.++-.+-+.-.++|.-++.......+..+...+
T Consensus 109 ~-----~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 109 A-----MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred H-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1222233333 5556889999999998888888776666655444333344455444433333333333333
No 166
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=86.80 E-value=23 Score=36.33 Aligned_cols=66 Identities=20% Similarity=0.150 Sum_probs=49.7
Q ss_pred ccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh
Q 012017 273 QEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTL 338 (473)
Q Consensus 273 q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv 338 (473)
||+.+.+..+-..|++-=-+.+.+.-|+++.|.|..++|..-++..+..+.+......+.+|.|..
T Consensus 4 ~~~~~~~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~ 69 (382)
T PRK11128 4 QPTRWLALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQL 69 (382)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcch
Confidence 666666655544443321234456679999999999999999999999999898888888888863
No 167
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=86.69 E-value=23 Score=38.57 Aligned_cols=130 Identities=14% Similarity=0.127 Sum_probs=83.5
Q ss_pred HHHHHHHhhhcCCchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012017 280 VSLALLFFTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS 358 (473)
Q Consensus 280 lalalLY~TVLsf~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s 358 (473)
+++.+=++....++.+...+-+ .-|+|+.++|..-++-.+.|-..-+.+.++.+|+|.-|.-.++...-. +++...
T Consensus 41 ~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~---i~~~~~ 117 (462)
T PRK15034 41 SCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI---IPCVWL 117 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH---HHHHHH
Confidence 3333333334456666555555 579999999999998888888888888999999999887776665432 222222
Q ss_pred hhc-c---chh--HHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHH
Q 012017 359 IWI-H---NSL--VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 418 (473)
Q Consensus 359 ~~~-~---~~~--~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~l 418 (473)
.+. + .+. .-..-++.|+. -+ .| .+.+..+.+.-|++|||+..|+-...-++--.
T Consensus 118 ~~a~~~~~~s~~~lli~r~l~Gig---g~--~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~ 177 (462)
T PRK15034 118 GIAVQNPNTPFGIFIVIALLCGFA---GA--NF-ASSMGNISFFFPKAKQGSALGINGGLGNLGVS 177 (462)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHH---HH--hH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHH
Confidence 221 1 122 22333444552 22 22 55677788889999999999988655554443
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=85.97 E-value=31 Score=37.38 Aligned_cols=126 Identities=10% Similarity=-0.043 Sum_probs=67.9
Q ss_pred chhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh-hhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012017 293 GTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 370 (473)
Q Consensus 293 ~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r-iGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~ 370 (473)
...+..|+.+ -|+++...+..-+...........++.++.+| +|.-|+=+++.....+....+.. .+.... .
T Consensus 41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~---~~~~~~---~ 114 (500)
T PRK09584 41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW---SGHDAG---I 114 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH---hcccHH---H
Confidence 3457778865 68988877665555443433444678999999 59888877776665544332221 111111 1
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCc--ccchhhhhHHHHHHHHHHHHHhH
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESD--RCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~--Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
+..+.++--+|-=.+--+...++.|..|+++ |+...+..+...++-..+...++
T Consensus 115 l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 115 VYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 1111111111211122344566777776543 44556666667777776664444
No 169
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=85.71 E-value=61 Score=35.64 Aligned_cols=193 Identities=13% Similarity=0.156 Sum_probs=98.9
Q ss_pred cchhhhhhccchhhhHHHHHHHhhhcCCchh------HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh
Q 012017 265 GAWQVYLKQEVVLPGVSLALLFFTVLSFGTL------MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTL 338 (473)
Q Consensus 265 ~~w~~Y~~q~vflaslalalLY~TVLsf~~l------mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv 338 (473)
..++++++.|...-.+.+.+.-....-|+|+ .|..+++.|+++..--..--...+.-+..|++.|++++|+|--
T Consensus 256 ~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 256 ISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred CcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4566677766554443333333333334443 2344567899988766666666667789999999999999932
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccc---h---hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHH
Q 012017 339 RTGLWSIWSQWFCLLICVASIWIHN---S---LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSL 412 (473)
Q Consensus 339 rtGl~~l~~Q~~~L~~~v~s~~~~~---~---~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl 412 (473)
.-=+.+.....+++.+=+....... + +..+...+.-++.==+|+ --.---+..|.+|++.|.+..++-.+.
T Consensus 336 pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~---gpi~~fi~aELf~~~~R~aa~s~~~~~ 412 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGP---GPIPWFIGAELFPQSARSAAQSVATAV 412 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCC---CchhHHHHHHhCCccchHHHHHHHHHH
Confidence 2222222222222221111111111 1 111111111111111111 001223677999999999988888887
Q ss_pred HHHHHHHHHHhHHhccCC-CcchhHHHHHHHHHHHHHHHHHHH-HHHhhCCcc
Q 012017 413 QSTMDLMAYTMGIIISNP-QDFWKLILISVIVVTLAAILYTFH-LYRIRKHLF 463 (473)
Q Consensus 413 ~slf~ll~~v~~Ii~~~P-~~F~~lv~iS~~~V~~a~~~y~~~-~~~~rghl~ 463 (473)
|.+. .++.++.+|-- +.+|-..++=+....+...+|++. +=-.||+-+
T Consensus 413 ~w~~---~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 413 NWLS---NFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHH---HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 7765 45555555543 344444444444444444444432 223666644
No 170
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=85.69 E-value=16 Score=38.83 Aligned_cols=141 Identities=15% Similarity=0.278 Sum_probs=92.3
Q ss_pred HHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-hc
Q 012017 283 ALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WI 361 (473)
Q Consensus 283 alLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~-~~ 361 (473)
+++|-+++++ +-.|+.++|+|+.+-|.+=++..+.++..++..|.+.+|-.-.|.=.... ..|-..+...+ |.
T Consensus 221 S~~~Y~~~~W---LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~---~~~~l~G~~G~~~~ 294 (395)
T COG2807 221 SLLYYIVIGW---LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA---LLLMLVGLVGLLLA 294 (395)
T ss_pred HHHHHHHHHH---HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH---HHHHHHHHHHHHHh
Confidence 5556665554 56678899999999999999999999999999999999866555322111 12222233333 45
Q ss_pred cchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HHHHHhHHhccCCCcc
Q 012017 362 HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIISNPQDF 433 (473)
Q Consensus 362 ~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll~~v~~Ii~~~P~~F 433 (473)
|+..+-...++.|+-.. =.|-++-+-+.++.-++++.+.-+|+-.+.-++.- .--+.++.+...-..|
T Consensus 295 P~~~~~lw~~llG~G~G----~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 295 PGQLPILWALLLGLGQG----GAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred hhhHHHHHHHHHhCccc----hHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 55433333444444211 25888899999999999999999998877776553 3334444444333443
No 171
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=85.19 E-value=16 Score=38.83 Aligned_cols=125 Identities=10% Similarity=0.031 Sum_probs=73.3
Q ss_pred HhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchh
Q 012017 286 FFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL 365 (473)
Q Consensus 286 Y~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~ 365 (473)
|....+++.....+...-|.+...+|..-+.-.+....+..+..++.+|+|.-+.=+.+...- ...++..-+.++ .
T Consensus 32 ~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~---~~~~~~~~~~~~-~ 107 (455)
T TIGR00892 32 YAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA---SLGMILASFSSN-V 107 (455)
T ss_pred HhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH---HHHHHHHHHhhh-H
Confidence 333345666677777788999999999988887777778888899999999765433332221 111222222221 1
Q ss_pred HHHH---HHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 366 VAAY---MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 366 ~s~~---~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
...+ .++.|+..+ .. + .....++-+..| ++|+...|..++-+++.-.+-
T Consensus 108 ~~l~~~~~~l~G~~~~---~~-~-~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~ 159 (455)
T TIGR00892 108 IELYLTAGFITGLGLA---FN-F-QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTL 159 (455)
T ss_pred HHHHHHHHHHHHhcch---hh-h-hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHH
Confidence 1111 123343332 11 1 222344445565 789999999998887765443
No 172
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=83.53 E-value=28 Score=37.68 Aligned_cols=316 Identities=20% Similarity=0.203 Sum_probs=162.7
Q ss_pred HHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhH-HHHHHHHHHHHHHHHHHHHh
Q 012017 41 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFI-AFVLLVILTNISGAVGVIST 119 (473)
Q Consensus 41 ~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~-~~~~l~~l~~~~~~i~~Las 119 (473)
++++.+++.+|.+|.++||..|.--+-..+++--+ |.++ +.+. ++++ ++.+ =.+--+.++...-|+
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~----sTil-Fafg-------~sy~~l~vA-R~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFL----STIL-FAFG-------NSYPMLFVA-RSLQGVGSAFADTSG 180 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHH----HHHH-HHHc-------chhHHHHHH-HHHhhhhHHHHHhhh
Confidence 56778899999999999998665444344332222 2221 2111 1122 2211 111111222223333
Q ss_pred hhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 012017 120 LAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSV 199 (473)
Q Consensus 120 ~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 199 (473)
.+.- ..| ..+ |+ ++=+.|--..--|-|-| ++||-+.|.+..+++..+-.++.+..-++....+++.+.
T Consensus 181 laml--Ad~-----f~~-d~-er~~vmGialgfislG~-lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~-- 248 (464)
T KOG3764|consen 181 LAML--ADV-----FPE-DN-ERGSVMGIALGFISLGV-LVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE-- 248 (464)
T ss_pred HHHH--HHH-----ccc-ch-hhhHHHHHHHHHHhccc-eecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC--
Confidence 2221 111 122 22 33345555666666654 789999999999998877777777777777766655422
Q ss_pred HhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhccchhhh
Q 012017 200 YKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPG 279 (473)
Q Consensus 200 Y~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflas 279 (473)
| .+. ++.+.++ + ..-|+.--.+-+..+.
T Consensus 249 ----p------~~~----~~~~~~~----------------~----------------------~~~~~Ll~dP~I~~~a 276 (464)
T KOG3764|consen 249 ----P------TEM----DPDSTEQ----------------G----------------------TPMWSLLMDPYILLIA 276 (464)
T ss_pred ----c------ccc----Ccccccc----------------C----------------------ccHHHHHhCchHhhhh
Confidence 1 000 0000000 0 0112222222244444
Q ss_pred HHHHHHHhhhcCC-chhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012017 280 VSLALLFFTVLSF-GTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA 357 (473)
Q Consensus 280 lalalLY~TVLsf-~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~ 357 (473)
+++...-++ ++| +++...|-.. -+-+.-++|..---+++.=..||-++-.+..|++-.| |-...+. .++.++.
T Consensus 277 gai~~~n~~-lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~g-l~~~G~~ 351 (464)
T KOG3764|consen 277 GAITFSNSS-LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLGG-LATVGVS 351 (464)
T ss_pred cchhhccch-HHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh---HHHHHHH-HHHHHHH
Confidence 443332222 111 2222333332 2434447888777778888899999999999999765 4443332 2233344
Q ss_pred HhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccc--hhhhhHHHHHHHHHHHHHhH----HhccCCC
Q 012017 358 SIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCV--VGGVQNSLQSTMDLMAYTMG----IIISNPQ 431 (473)
Q Consensus 358 s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~--v~gvq~Sl~slf~ll~~v~~----Ii~~~P~ 431 (473)
+...| ..-+..-+..-....++|-=+.|-+-.-.+|+.|++.+-.- +.|.-.++++..--+.|.++ =..-+--
T Consensus 352 ~~~iP-~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 352 SGPIP-FATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred hchhH-hhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 44333 12223334444555666777889998999999997775441 33444445544444444443 1223344
Q ss_pred cchhHHHH
Q 012017 432 DFWKLILI 439 (473)
Q Consensus 432 ~F~~lv~i 439 (473)
-|.|+..+
T Consensus 431 GF~wl~~i 438 (464)
T KOG3764|consen 431 GFEWLMTI 438 (464)
T ss_pred hHHHHHHH
Confidence 57777644
No 173
>PRK15075 citrate-proton symporter; Provisional
Probab=83.52 E-value=38 Score=35.48 Aligned_cols=117 Identities=9% Similarity=0.009 Sum_probs=64.0
Q ss_pred cCCCchHHHHHhH------HHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHH-----HHHH
Q 012017 303 EGIPAYIIGIARG------ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVA-----AYML 371 (473)
Q Consensus 303 ~G~s~~~ig~~Rg------~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s-----~~~l 371 (473)
-|.++...+.... .+.+....|.+...++.+|+|--|.=+++...-..... ..-+.++ ... ...+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~---l~~~~~~-~~~~~~~~~~~l 120 (434)
T PRK15075 45 FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTL---LIAFVPG-YATIGLAAPLLV 120 (434)
T ss_pred hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHH---HHHhCCc-HHHHHHHHHHHH
Confidence 4666665543321 11222235678889999999987766655543222211 2222332 111 1122
Q ss_pred Hhhhhhhcchhhhhhhh-hhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 372 MVGVATSRLGLWMFDLS-VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 372 ~~gi~~SR~GLW~fDL~-v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
+.+-.+.-+| .+.+.. ...++-|..|+++||...++..+..++.-.+..+++
T Consensus 121 ~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g 173 (434)
T PRK15075 121 LLGRLLQGFS-AGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLG 173 (434)
T ss_pred HHHHHHhhcc-ccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 3332233333 233332 345788999999999999998888777655544433
No 174
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=82.07 E-value=40 Score=36.61 Aligned_cols=122 Identities=11% Similarity=0.000 Sum_probs=70.7
Q ss_pred hHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh-hhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 012017 295 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 372 (473)
Q Consensus 295 lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r-iGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~ 372 (473)
.+.-|+++ -|+++...+..-+.-.......+..+.++-+| +|.-|+=+++.....+...++..+ +.+. ..+.
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~---~~~~---~ll~ 109 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS---LLKP---DLIF 109 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh---ccch---hHHH
Confidence 34556554 47777776655555555555666788999998 999999888877766554444322 1111 1122
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCC--cccchhhhhHHHHHHHHHHHHH
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPES--DRCVVGGVQNSLQSTMDLMAYT 422 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~--~Rg~v~gvq~Sl~slf~ll~~v 422 (473)
.+.++-=+|-=.+--+..-++=|..|++ +|+...+.-..-.|+-..+-..
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 2333323443344444455666667666 4566666666666666655443
No 175
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=82.06 E-value=16 Score=39.93 Aligned_cols=160 Identities=14% Similarity=0.166 Sum_probs=98.3
Q ss_pred HHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHh----hhhhhhHHHHHHHHHHHHHHHHHHHh-hccchh-----
Q 012017 296 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQS----RISTLRTGLWSIWSQWFCLLICVASI-WIHNSL----- 365 (473)
Q Consensus 296 mtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~----riGlvrtGl~~l~~Q~~~L~~~v~s~-~~~~~~----- 365 (473)
++-|+..-|++....+..-..+.+.|+....+.-++.. |+|--|.=+..... ....+...+ +.+...
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~---~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA---LVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH---HHHHHHHHHHhCchhhhhccc
Confidence 55588889999999999999999999999999889987 59977653332111 111111111 111100
Q ss_pred -HHHHHHHhhhhhhcchhhhhhhhhh-------hhhccccCCCcc--cchhhhhHHHHHHHHHHHHHhHHhc------cC
Q 012017 366 -VAAYMLMVGVATSRLGLWMFDLSVI-------QQMQDLVPESDR--CVVGGVQNSLQSTMDLMAYTMGIII------SN 429 (473)
Q Consensus 366 -~s~~~l~~gi~~SR~GLW~fDL~v~-------qi~Qe~V~e~~R--g~v~gvq~Sl~slf~ll~~v~~Ii~------~~ 429 (473)
.+......+++..=+|+|..|++.. -++=|.+|+++| +..++.++.+.++-.++-|+++-+. |.
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 0000001112233345687887654 256778888865 6799999999999999988877543 21
Q ss_pred ---------CCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012017 430 ---------PQDFWKLILISVIVVTLAAILYTFHLYRIR 459 (473)
Q Consensus 430 ---------P~~F~~lv~iS~~~V~~a~~~y~~~~~~~r 459 (473)
|.+++..-.++........ +.+.+..||+
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~-l~t~~~v~E~ 221 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILT-YIALSAVKEN 221 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHH-HHHeeeeecc
Confidence 3466777777666555555 4444434443
No 176
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=81.87 E-value=82 Score=34.16 Aligned_cols=35 Identities=9% Similarity=-0.003 Sum_probs=25.1
Q ss_pred hhhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHH
Q 012017 155 LTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTV 189 (473)
Q Consensus 155 L~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~ 189 (473)
-....++|++.|.+.+..+++.+..+.+....++.
T Consensus 160 ~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 160 NIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 45778999999999887787776655544444444
No 177
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=80.90 E-value=38 Score=34.71 Aligned_cols=59 Identities=17% Similarity=0.194 Sum_probs=44.5
Q ss_pred hHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhh
Q 012017 279 GVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRIST 337 (473)
Q Consensus 279 slalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGl 337 (473)
++.+...|++-=-+.+.+..|+++.|+|+.++|..-+...+....+..+...+.+|.|-
T Consensus 10 ~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~ 68 (382)
T TIGR00902 10 ALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANH 68 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34444444432113445778999999999999999999999999999888888888884
No 178
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=80.70 E-value=32 Score=36.12 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhccceeecccccchhHHHHHHHH
Q 012017 36 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLV 71 (473)
Q Consensus 36 svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~ 71 (473)
+....+..++.+++...+|++.||..|.+.+..+.+
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~ 289 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV 289 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 333344444666777889999999999998766654
No 179
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=80.43 E-value=47 Score=39.58 Aligned_cols=125 Identities=10% Similarity=0.087 Sum_probs=78.7
Q ss_pred hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhhhhhhcchhhhhh
Q 012017 308 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFD 386 (473)
Q Consensus 308 ~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fD 386 (473)
..+++.-++..+..+..+....++..|+|.-|.=.+.......+...+...++.++. ..-...++.|+..+ .+-
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a-----~~~ 126 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSA-----LFG 126 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----hhc
Confidence 457777777777778888888999999997664323333333333333333332211 11223333344333 455
Q ss_pred hhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHH
Q 012017 387 LSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILI 439 (473)
Q Consensus 387 L~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~i 439 (473)
.+..-++-+.+|+++|+..+|..++..++.-++-..++-.+- +.++|....
T Consensus 127 p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~--~~~~~~~~~ 177 (1140)
T PRK06814 127 PIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT--ISGNFVILV 177 (1140)
T ss_pred hHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH--hccccHHHH
Confidence 677778899999999999999999999998887666554332 245665544
No 180
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=79.71 E-value=26 Score=36.70 Aligned_cols=125 Identities=8% Similarity=-0.015 Sum_probs=74.6
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhhhhhhcc
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRL 380 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~SR~ 380 (473)
+-|.++...+..=++-.+.+..+.+...++.+|+|.-|.=+++.....++... ..+.++. ..-..-++.|+..+
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l~~~r~l~Gi~~~-- 119 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA---TLFTTSMTQFLIARFIQGTSIC-- 119 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHH--
Confidence 45777777777777777777788899999999999877655554433322222 2223321 12223344444332
Q ss_pred hhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhH
Q 012017 381 GLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKL 436 (473)
Q Consensus 381 GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~l 436 (473)
... -...-+++|..|+++|++..|.-++..++.-.+...++-..- ++++|-
T Consensus 120 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~--~~~gw~ 170 (413)
T PRK15403 120 --FIA-TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM--HFVHWK 170 (413)
T ss_pred --HHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCHH
Confidence 111 112245778889999999888888887777766655553332 335553
No 181
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=76.80 E-value=1.2e+02 Score=32.99 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=51.3
Q ss_pred HhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc-c-----CC-----CcchhHHHHH
Q 012017 372 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII-S-----NP-----QDFWKLILIS 440 (473)
Q Consensus 372 ~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~-~-----~P-----~~F~~lv~iS 440 (473)
+....+--+|-=.+........++.+|++.+|..+|+-+-.+++-..+.-.++-.. . +| ........++
T Consensus 383 i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 462 (489)
T PRK10207 383 VLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIG 462 (489)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHH
Confidence 33344444566666777788899999999999999998877776655544333111 1 12 2345555556
Q ss_pred HHHHHHHHHHHHHH
Q 012017 441 VIVVTLAAILYTFH 454 (473)
Q Consensus 441 ~~~V~~a~~~y~~~ 454 (473)
...+.+|.+++..+
T Consensus 463 ~~~~~~~v~~~~~~ 476 (489)
T PRK10207 463 LVTLGVAVVMALMV 476 (489)
T ss_pred HHHHHHHHHHHHHH
Confidence 55556666555443
No 182
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=76.78 E-value=1.4e+02 Score=33.82 Aligned_cols=144 Identities=15% Similarity=0.142 Sum_probs=73.1
Q ss_pred cchhhhhhccchhhhHHHHH----HHhhhcCCchhHHHHHHhcCCCc-hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhh
Q 012017 265 GAWQVYLKQEVVLPGVSLAL----LFFTVLSFGTLMTATLEWEGIPA-YIIGIARGISATIGIAATILYPILQSRISTLR 339 (473)
Q Consensus 265 ~~w~~Y~~q~vflaslalal----LY~TVLsf~~lmtaYl~~~G~s~-~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvr 339 (473)
-.++.+-+.+.|.+.+..++ .|+.+..+=.+++.+.+.+.... ...|..-.........|.++.+.+.++++-.|
T Consensus 301 ~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K 380 (599)
T PF06609_consen 301 FPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIK 380 (599)
T ss_pred CCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchh
Confidence 34444433345555433322 34555555566777776554321 12222211222222345577888888888888
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhccch--hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH
Q 012017 340 TGL-WSIWSQWFCLLICVASIWIHNS--LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST 415 (473)
Q Consensus 340 tGl-~~l~~Q~~~L~~~v~s~~~~~~--~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl 415 (473)
--+ .+..++.++... .+.. .+.. ..-.+.++.|+ |.=.......-+.|-.+|+++-|+.+|+-.+..++
T Consensus 381 w~li~~~~~~ta~~Ga-ma~~-~~~n~~~~i~~~~l~g~-----giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~ 452 (599)
T PF06609_consen 381 WQLIFGSVLMTAFCGA-MAAV-RPDNKNAAIAFLVLAGF-----GIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI 452 (599)
T ss_pred HHHHHHHHHHHHHHHH-HHHc-cCCCcchHHHHHHHHHH-----hHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH
Confidence 654 355555443321 1221 2221 22233344443 32223334455778899999999988866665544
No 183
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=76.04 E-value=44 Score=37.72 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=85.9
Q ss_pred hhhhhccchhhhHHHHHHHhh----hcCCchhHHHHHHh-cCCCch--HHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhH
Q 012017 268 QVYLKQEVVLPGVSLALLFFT----VLSFGTLMTATLEW-EGIPAY--IIGIARGISATIGIAATILYPILQSRISTLRT 340 (473)
Q Consensus 268 ~~Y~~q~vflaslalalLY~T----VLsf~~lmtaYl~~-~G~s~~--~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrt 340 (473)
+-|++.|-+.++++...++++ ++...+....|... -|=++. .+.....++.. .+-.+..++...+|- |-
T Consensus 34 ~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~a---v~~~~~G~LSDlfGR-r~ 109 (599)
T PF06609_consen 34 DGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASA---VSFPFVGRLSDLFGR-RY 109 (599)
T ss_pred CCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHH---HHHHhhHHHHHHhcc-hH
Confidence 447889999998875555442 34333444456554 243322 33333333222 222233444445552 22
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 341 GLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 341 Gl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
.+. .-+...+ +..+-. ...-+.-.+..|.++.-+| -+.-....-.++|.+|.+.|+...+. .+..-+..
T Consensus 110 ~~i--~g~~l~v---vG~Iv~-atA~~~~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~~~~~----~~~~~i~~ 178 (599)
T PF06609_consen 110 FFI--IGSLLGV---VGSIVC-ATAQNMNTFIAGMVLYGVG-AGVQELAALAISELVPNKWRGLGLAI----ASIPFIIT 178 (599)
T ss_pred HHH--HHHHHHH---hHHHHh-hcCCcHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhhHhHH----HHHHHHhh
Confidence 221 1122222 222211 1233455667788888888 46666666678999999888764432 22222221
Q ss_pred H----HhHHhccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012017 421 Y----TMGIIISNPQDFWKLILISVIVVTLAAILYTFH 454 (473)
Q Consensus 421 ~----v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~ 454 (473)
. ..+=.+......+|.-.+-......+.++...|
T Consensus 179 ~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 179 TWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred hcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 1 111122334577776666666555555555444
No 184
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=75.41 E-value=1.3e+02 Score=32.65 Aligned_cols=146 Identities=11% Similarity=0.064 Sum_probs=83.9
Q ss_pred hhccchhhhHHHHHHHhhhc-CCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHH
Q 012017 271 LKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQW 349 (473)
Q Consensus 271 ~~q~vflaslalalLY~TVL-sf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~ 349 (473)
.+++.+.......+..+|=. ..-.-.....++.|.+... ...--+-.+..+.+|+++..+.+|+|.-+--++|...+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~ 370 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMS 370 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHH
Confidence 44445555555566666521 2222344457778888654 222233334456778888999999998888888888888
Q ss_pred HHHHHHHHHhhc-cc--------hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 350 FCLLICVASIWI-HN--------SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 350 ~~L~~~v~s~~~-~~--------~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
+|.......+.. .. +.........-+... -++.+-.--.++=|..|.+-|+...+.-.+.|.++....
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f---~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 371 ICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSF---AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHH---hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 887654333222 11 011111111111111 123333333555677899999999999999998887554
No 185
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=75.23 E-value=19 Score=39.34 Aligned_cols=47 Identities=15% Similarity=0.297 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHH
Q 012017 36 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGV 82 (473)
Q Consensus 36 svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~ 82 (473)
..-+.+...+.++++|.-|.+-||++|.+++-..+++=-+++.++..
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f 117 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF 117 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH
Confidence 34577888999999999999999999999987777666666554444
No 186
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=74.70 E-value=1.3e+02 Score=32.52 Aligned_cols=251 Identities=14% Similarity=0.174 Sum_probs=139.5
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 012017 24 MISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVL 103 (473)
Q Consensus 24 L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~ 103 (473)
+.+.|.=|---++..+++--.+=.+.+-.-|..++|..+.+.+-..+.. .++.|. ++++..+..++..|.+
T Consensus 39 l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l----~avg~~-----lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 39 LKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLL----YAVGAA-----LFWPAASSKSYGFFLV 109 (422)
T ss_pred HHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHH----HHHHHH-----HHhhhhhhhhHHHHHH
Confidence 3445555666678888888888888888999999999999987666431 122333 2333223334544432
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhh-----h-----
Q 012017 104 LVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFV-----S----- 173 (473)
Q Consensus 104 l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~-----s----- 173 (473)
.+.++...+.-|=+.+|.-. ..+ ++++ .+=+|||-. .-.-=.--+++|++++.++-+. +
T Consensus 110 --~lFila~Gi~~LetaaNp~v------~~l-g~~~-~a~~rlnl~-q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~ 178 (422)
T COG0738 110 --ALFILASGIGLLETAANPYV------TLL-GKPE-SAAFRLNLA-QAFNGLGAILGPLLGSSLILSGVALTMSAAQIL 178 (422)
T ss_pred --HHHHHHhhhHHHHhccchHH------HHh-CCch-hHHHHHHHH-HHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHH
Confidence 22223344555555555421 111 2221 233444422 2222234478899988887631 1
Q ss_pred -HHH--HHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHH
Q 012017 174 -LQA--SAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRW 250 (473)
Q Consensus 174 -~~~--~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (473)
.+. .+-+-.-+=..+.++-...+...+.+.|++++..++ +.+ +.
T Consensus 179 ~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~--------~~~-------------------~~------ 225 (422)
T COG0738 179 AIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPS--------LGA-------------------SG------ 225 (422)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccc--------ccc-------------------cc------
Confidence 111 111111111222223333444455555544421000 000 00
Q ss_pred HHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhh-cCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhH
Q 012017 251 RWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILY 328 (473)
Q Consensus 251 ~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TV-Lsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~ 328 (473)
..+-.+=+|+|-+.-+.-..+||..+ -..++-+..|+.+ .|+++.+-+.+-..-=+.-+.|=++.
T Consensus 226 -------------~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig 292 (422)
T COG0738 226 -------------SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIG 292 (422)
T ss_pred -------------cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 00223336777777788888999887 5788889999998 89887766665555444555777888
Q ss_pred HHHHhhhhhhhH
Q 012017 329 PILQSRISTLRT 340 (473)
Q Consensus 329 p~l~~riGlvrt 340 (473)
.++++|+...|.
T Consensus 293 ~~lm~~~~~~k~ 304 (422)
T COG0738 293 SALMSRIKPEKY 304 (422)
T ss_pred HHHHHHhCHHHH
Confidence 889999988875
No 187
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=74.27 E-value=11 Score=39.91 Aligned_cols=49 Identities=18% Similarity=0.292 Sum_probs=42.3
Q ss_pred CchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhH
Q 012017 292 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRT 340 (473)
Q Consensus 292 f~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrt 340 (473)
|-+-+..||+++|+|+.+||+.-+++.+..+.+......+.+|.+..|-
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~ 69 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKR 69 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHH
Confidence 4456778999999999999999999999999999888889888865443
No 188
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=71.97 E-value=52 Score=36.38 Aligned_cols=156 Identities=14% Similarity=0.137 Sum_probs=88.8
Q ss_pred HHHHH-hcCCCchH-HHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHH-HhhccchhHHHHHHH
Q 012017 297 TATLE-WEGIPAYI-IGIARGISATIGIAATILYPILQSRISTLRTGLW-SIWSQWFCLLICVA-SIWIHNSLVAAYMLM 372 (473)
Q Consensus 297 taYl~-~~G~s~~~-ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~-~l~~Q~~~L~~~v~-s~~~~~~~~s~~~l~ 372 (473)
+.|+. ..|+++.+ .|..-+.....=.+.-+..-++..|+|.-|.=.. .+.|=..+++.+.+ +++ ..-+.=++
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~----~L~i~R~l 124 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW----HMQLMEVF 124 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 34444 46888887 6766666666656666777778888886553222 11221222222211 111 11111122
Q ss_pred hhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHh--ccCCCcchhHHHHHHHHHHHHHHH
Q 012017 373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGII--ISNPQDFWKLILISVIVVTLAAIL 450 (473)
Q Consensus 373 ~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii--~~~P~~F~~lv~iS~~~V~~a~~~ 450 (473)
.|+.-+ .+-+....+=.++|++||++++|.-++=.++-..+...++-. --.-..|.-|-.||.+++..+. +
T Consensus 125 lGvaEA------~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~-~ 197 (511)
T TIGR00806 125 YSVTMA------ARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSV-F 197 (511)
T ss_pred HHHHHH------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH-H
Confidence 222221 122677788889999999999999888887776666555533 1133455566778888888877 4
Q ss_pred HHHHHHHhhCCcc
Q 012017 451 YTFHLYRIRKHLF 463 (473)
Q Consensus 451 y~~~~~~~rghl~ 463 (473)
...++-+..+-++
T Consensus 198 ~a~~LP~~~~sl~ 210 (511)
T TIGR00806 198 LALFLKRPKRSLF 210 (511)
T ss_pred HHHhCCCCchhhh
Confidence 4555444444333
No 189
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=71.34 E-value=10 Score=40.72 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=44.1
Q ss_pred hhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHH
Q 012017 294 TLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 347 (473)
Q Consensus 294 ~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~ 347 (473)
+...-||.+ .|+++.++|+.=+.++++.+....++..+..|+|.-|.=+|.+..
T Consensus 28 pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~ 82 (412)
T PF01306_consen 28 PFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAI 82 (412)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHH
T ss_pred HHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHH
Confidence 346668886 899999999999999999999999999999999998877766544
No 190
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]
Probab=68.50 E-value=58 Score=35.56 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=79.1
Q ss_pred HhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHhhhhhhcchhhhhhhhhhh
Q 012017 313 ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQ 391 (473)
Q Consensus 313 ~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~-~~s~~~l~~gi~~SR~GLW~fDL~v~q 391 (473)
..|+|++.|+.+.++--++.+|+.+- .|+..+..-...|+.=..+-...|| ..++| +.|+.+
T Consensus 193 q~glG~l~G~~gg~l~~~~Inr~nLd-~GL~pil~la~~Ll~fs~t~aiGGsG~LaVY--l~Gll~-------------- 255 (574)
T COG3263 193 QFGLGLLLGLGGGKLLLQLINRINLD-SGLYPILALAGGLLIFSLTGAIGGSGILAVY--LAGLLL-------------- 255 (574)
T ss_pred HhhHHHHHHHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhcCcccHHHH--HHHHHh--------------
Confidence 46899999999999999999999755 8988777655544443334444444 34444 344432
Q ss_pred hhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchh
Q 012017 392 QMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWK 435 (473)
Q Consensus 392 i~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~ 435 (473)
-+.|-..|..+-.+++.+..++.++||.+-=.+-.|+||.-
T Consensus 256 ---GN~~i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~ 296 (574)
T COG3263 256 ---GNRPIRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLP 296 (574)
T ss_pred ---CCCcchhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhH
Confidence 45688889999999999999999999999999999999976
No 191
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=67.80 E-value=19 Score=37.28 Aligned_cols=125 Identities=10% Similarity=0.026 Sum_probs=66.9
Q ss_pred HHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHH---HHHHHHHHHHHHHHHHhhccchh--HHHH
Q 012017 296 MTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGL---WSIWSQWFCLLICVASIWIHNSL--VAAY 369 (473)
Q Consensus 296 mtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl---~~l~~Q~~~L~~~v~s~~~~~~~--~s~~ 369 (473)
+.-|+. .-|+|+..+|..-.++.+.......+.-++..|.+. |-|- |-+.....+.+..+..++.|+.. ....
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~-r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRT-RWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCC-CCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 334444 369999999999999999998888888888887652 2221 22222222222223333344211 1111
Q ss_pred HHHhhhhhhcchhhhhhhhhhhhhcccc-CCCcccchhhhhHHHHHHHHHHHH
Q 012017 370 MLMVGVATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTMDLMAY 421 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~fDL~v~qi~Qe~V-~e~~Rg~v~gvq~Sl~slf~ll~~ 421 (473)
.++....+-.++.=.++....-+.=|.. |++||+..++..+...++--++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~ 153 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVA 153 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111112111112333333444444 678999999988887777655543
No 192
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=67.37 E-value=1.8e+02 Score=31.18 Aligned_cols=141 Identities=12% Similarity=0.077 Sum_probs=72.8
Q ss_pred HHHHHHHhhhcCCchhHHHHHHhcCCC--chHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012017 280 VSLALLFFTVLSFGTLMTATLEWEGIP--AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA 357 (473)
Q Consensus 280 lalalLY~TVLsf~~lmtaYl~~~G~s--~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~ 357 (473)
+....+|.....|+..+.-|......+ ...+.+.-.+....++-+.+.-..+..+.|-...-..+.+.- -+.+..
T Consensus 320 l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~---~~~~~~ 396 (521)
T KOG0255|consen 320 LRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLA---GIGLLL 396 (521)
T ss_pred HHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHH---HHHHHH
Confidence 555555555555555555555542211 112222223333366766666666666666443333333322 222223
Q ss_pred HhhccchhH---HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhc
Q 012017 358 SIWIHNSLV---AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII 427 (473)
Q Consensus 358 s~~~~~~~~---s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~ 427 (473)
..|.+.... -..+-..|-... =.+|+++ .+..-|..|..-|+...|.-+....+-.++...+....
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 397 FGWLPDDLGGWLHWILPLLGKFFI---GSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHhhccchhHHHHHHHHHHHHHH---HHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332111 111111121111 2566666 77777888999999999998888888777666666443
No 193
>PF13955 Fst_toxin: Toxin Fst, type I toxin-antitoxin system; PDB: 2KV5_A.
Probab=63.35 E-value=8 Score=24.13 Aligned_cols=18 Identities=17% Similarity=0.599 Sum_probs=14.4
Q ss_pred hhhhhhHHHHHHhhhhhH
Q 012017 157 CKLLAPAITGFIISFVSL 174 (473)
Q Consensus 157 ckllaPl~vG~l~t~~s~ 174 (473)
..++||+++|.+++-++.
T Consensus 2 ~~iIaPi~VGvvl~l~~~ 19 (21)
T PF13955_consen 2 TTIIAPIVVGVVLTLFDH 19 (21)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ceehhhHHHHHHHHHHHh
Confidence 568999999999875543
No 194
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=63.08 E-value=1.6e+02 Score=32.01 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=80.1
Q ss_pred CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcc--h
Q 012017 304 GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRL--G 381 (473)
Q Consensus 304 G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~--G 381 (473)
.+++.+-|..-+.-+.-.+.+++-.-++.+|+|.-|.=.++. +.-++..++.|- .....+- .++..|+ |
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~------~~sa~~t~l~P~--aa~~~~~-~~~~~R~lqG 139 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISG------LISALLTLLTPL--AASIGFY-LLLVLRFLQG 139 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHH------HHHHHHHHHHHH--HHHhcch-hhHHHHHHhH
Confidence 445556666666666666677777777777777655322211 122223333320 0000000 1223333 2
Q ss_pred h-hhhhhh-hhhhhccccCCCcccchhhhhHHHHHHHHHHHH-HhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 012017 382 L-WMFDLS-VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY-TMGIIISNPQDFWKLILISVIVVTLAAILYTFHLY 456 (473)
Q Consensus 382 L-W~fDL~-v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~-v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~~ 456 (473)
+ -+.|.. .-.+..++.|++||++..++-.+-.++-.++.. +.+.+... +|||.. +-+.+-..|...|..|.+
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~s-ifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPS-IFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCch-HHHHHHHHHHHHHHHHHH
Confidence 1 233433 334667789999999999999999988888877 56666644 788887 445555555556665543
No 195
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=60.61 E-value=2.4e+02 Score=30.17 Aligned_cols=97 Identities=9% Similarity=0.007 Sum_probs=53.0
Q ss_pred HHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccch----hHHHHHHHhhhhhhcchhhhhhhhhhhh
Q 012017 317 SATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVGVATSRLGLWMFDLSVIQQ 392 (473)
Q Consensus 317 gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~----~~s~~~l~~gi~~SR~GLW~fDL~v~qi 392 (473)
+.+.-..|.+.+.++.+|+|.-|+=.+++..-.++..++ -+.|+- .++..+++.+=.+.=+|.=+.=.+..-+
T Consensus 66 ~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~---a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 66 PFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI---GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH---HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 334445788899999999998888777666544333322 122321 1111112211111111111112245567
Q ss_pred hccccCCCcccchhhhhHHHHHHH
Q 012017 393 MQDLVPESDRCVVGGVQNSLQSTM 416 (473)
Q Consensus 393 ~Qe~V~e~~Rg~v~gvq~Sl~slf 416 (473)
+.|..|+++||...+....-..+-
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHH
Confidence 889999999999888765544433
No 196
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=60.22 E-value=33 Score=38.69 Aligned_cols=136 Identities=11% Similarity=0.055 Sum_probs=84.5
Q ss_pred CCchhHHHHHH-hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH-HHHHHHHHHHHHhhcc------
Q 012017 291 SFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW-SQWFCLLICVASIWIH------ 362 (473)
Q Consensus 291 sf~~lmtaYl~-~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~-~Q~~~L~~~v~s~~~~------ 362 (473)
++-+..++-+. .-|+++.+.|.+-+.-.+.-..+.+...++-+|.|--|.=.++.. +=..+++.+..-+..+
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 44444444444 459999999999888888777888888888888886553222222 2223333332221110
Q ss_pred ------------------c-----------------h--hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccch
Q 012017 363 ------------------N-----------------S--LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVV 405 (473)
Q Consensus 363 ------------------~-----------------~--~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v 405 (473)
+ . .....+|+.+-.+.-+|-=.+-.....++-|++|+++|+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 0 0 01123444444444455444445566788899999999999
Q ss_pred hhhhHHHHHHHHHHHHHhHHh
Q 012017 406 GGVQNSLQSTMDLMAYTMGII 426 (473)
Q Consensus 406 ~gvq~Sl~slf~ll~~v~~Ii 426 (473)
.|.-++...+--.+-++++-.
T Consensus 210 ~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 210 IGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred HHHHHHHHHhhhHHHHHHHHH
Confidence 999999888888888777643
No 197
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=55.11 E-value=3.3e+02 Score=30.07 Aligned_cols=115 Identities=15% Similarity=0.073 Sum_probs=60.7
Q ss_pred HHHHHhcC--CCchHHHHHhHHH----HHHHhhHHhhHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHhhccchhHHHH
Q 012017 297 TATLEWEG--IPAYIIGIARGIS----ATIGIAATILYPILQSRISTLRTGLW-SIWSQWFCLLICVASIWIHNSLVAAY 369 (473)
Q Consensus 297 taYl~~~G--~s~~~ig~~Rg~g----av~Gl~gT~~~p~l~~riGlvrtGl~-~l~~Q~~~L~~~v~s~~~~~~~~s~~ 369 (473)
.+|....| .++..+..+.+.- .+-|+.|.++.+++.+|+|-- .++. +.......-..-..+.+.+.. -
T Consensus 43 ~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK-~~l~~~~~l~~~~~~~~~~s~~~~~~----e 117 (485)
T KOG0569|consen 43 ETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK-NALLLSNLLAVLAALLMGLSKSAPSF----E 117 (485)
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHHHHHHHHHHHhhhH----H
Confidence 34444444 4555555555443 455778889999999999955 3333 333332222222223333211 1
Q ss_pred HHHhhhhhhcchhhh-----hhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHH
Q 012017 370 MLMVGVATSRLGLWM-----FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY 421 (473)
Q Consensus 370 ~l~~gi~~SR~GLW~-----fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~ 421 (473)
+ .+.+|+ +++ -+-.+.-.+||--|.+-||..+.+..-.-.+..++..
T Consensus 118 ~----li~GR~-i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 118 M----LILGRL-IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred H----HHHHHH-HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 1 112222 111 2233444678999999999987665555555555443
No 198
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=54.55 E-value=3.1e+02 Score=29.62 Aligned_cols=140 Identities=15% Similarity=0.063 Sum_probs=89.1
Q ss_pred cCCchhHHHHHHhc----CCCc----hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 012017 290 LSFGTLMTATLEWE----GIPA----YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI 361 (473)
Q Consensus 290 Lsf~~lmtaYl~~~----G~s~----~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~ 361 (473)
.|.++.+..+++.. ..+. ...+.+-+.-.+.+..|.+.+.++..++|--++=+.+.....+- .+...+.
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG---~ii~~~a 139 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIG---AIIIALA 139 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH---HHHHHHh
Confidence 45555555555542 1122 23477777777788889999999999999877765544433222 2222222
Q ss_pred cchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcchhHH
Q 012017 362 HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI 437 (473)
Q Consensus 362 ~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv 437 (473)
+ +...+..|=++.-+|.=.....+.-..=|--|.+.||...+...-....--++.|+.....++.. .+|-.
T Consensus 140 ~----~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~-~~Wr~ 210 (513)
T KOG0254|consen 140 P----SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVY-AGWRI 210 (513)
T ss_pred h----hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCC-ccHHH
Confidence 2 56667777777777754444444444444447779999998777777788888899998887752 55553
No 199
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=54.19 E-value=3.4e+02 Score=29.94 Aligned_cols=177 Identities=15% Similarity=0.093 Sum_probs=114.4
Q ss_pred hhhhhccchh-hhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHH
Q 012017 268 QVYLKQEVVL-PGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 346 (473)
Q Consensus 268 ~~Y~~q~vfl-aslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~ 346 (473)
.+.+++|.|+ -.++..+.|+...-|--....|.++.|+++...+..-.+-+++.+.|=++++++..+-..- -.+
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~-----~~~ 366 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR-----ALV 366 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-----hHH
Confidence 4556666554 3445555555544455567779999999999999999999999999999999998877722 223
Q ss_pred HHHHHHHHHH-HHhhccc--h---hHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 347 SQWFCLLICV-ASIWIHN--S---LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 347 ~Q~~~L~~~v-~s~~~~~--~---~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
.+..|++.+. ...+.|- + .....++++-...+...+.. .++=|.++.++-....|.+.=.+.++-+.-
T Consensus 367 ~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~------~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g 440 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTP------VILVDLVGLEKLSNAYGLLLLFQGIGALVG 440 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHcChhhcchHHHHHHHHhHHHHHcC
Confidence 3445544443 3334431 1 12222333334445555544 455566777777778888888887776654
Q ss_pred H-HhHHhccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012017 421 Y-TMGIIISNPQDFWKLILISVIVVTLAAILYTFHL 455 (473)
Q Consensus 421 ~-v~~Ii~~~P~~F~~lv~iS~~~V~~a~~~y~~~~ 455 (473)
- +.+.+.....++......+-....+++.++...-
T Consensus 441 pPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 441 PPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 3 3345555666677777777778888887777654
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=52.73 E-value=1.3e+02 Score=32.03 Aligned_cols=115 Identities=9% Similarity=0.083 Sum_probs=58.0
Q ss_pred cCCCchHHHHHhHHHHHHHhhHHhhHHHHHh----hhhhhhHHHHHHHHHHHHHHHHHHHhhccc-h-hHHHHHHHhhhh
Q 012017 303 EGIPAYIIGIARGISATIGIAATILYPILQS----RISTLRTGLWSIWSQWFCLLICVASIWIHN-S-LVAAYMLMVGVA 376 (473)
Q Consensus 303 ~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~----riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~-~-~~s~~~l~~gi~ 376 (473)
-|+|+..+|..-.++-+.....-.+.-.+.. |.|--|- |-++.-..+.+..+.-++.|+ + ......++...+
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp--~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~ 114 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKP--WILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYI 114 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcch--hHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 4888888888888877777766666666655 5576553 211111111111122222231 1 111111222222
Q ss_pred hhcchhhhhhhhhhhhhcccc-CCCcccchhhhhHHHHHHHHHH
Q 012017 377 TSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 377 ~SR~GLW~fDL~v~qi~Qe~V-~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
+-+++.=.++....-+.=|.. +++||..+++...-..++.-++
T Consensus 115 l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~ 158 (473)
T PRK10429 115 LWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV 158 (473)
T ss_pred HHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 223333333444444444544 6889999999876666655433
No 201
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=51.75 E-value=1.3e+02 Score=33.20 Aligned_cols=115 Identities=15% Similarity=0.208 Sum_probs=72.0
Q ss_pred CCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHH-HHHHHHhhccch--hHHHHHHHhhhhhhcch
Q 012017 305 IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCL-LICVASIWIHNS--LVAAYMLMVGVATSRLG 381 (473)
Q Consensus 305 ~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L-~~~v~s~~~~~~--~~s~~~l~~gi~~SR~G 381 (473)
=|+..+|+......+--++-+..+..+..|+.--|.-++.-.++.+.. .+++....-.-+ .+-...|+.|+ |
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-----~ 116 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-----G 116 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-----H
Confidence 366777777777776666667777777888876666655555554332 223332221111 12233444444 3
Q ss_pred hhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhH
Q 012017 382 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 424 (473)
Q Consensus 382 LW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~ 424 (473)
-=.++.+.+-++.|.||+++....++....-.|+..++-..++
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 3356788888999999999998888877777777777664443
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=51.38 E-value=3.6e+02 Score=29.44 Aligned_cols=54 Identities=15% Similarity=0.019 Sum_probs=37.1
Q ss_pred HHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHH
Q 012017 299 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCL 352 (473)
Q Consensus 299 Yl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L 352 (473)
|+....++...+...-.++.+.+..+..+.-++-+|+|-.|.=.++...-.++.
T Consensus 277 ~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 277 MLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 334456765444333456678888888899999999998887777665544444
No 203
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=47.57 E-value=3.8e+02 Score=28.70 Aligned_cols=109 Identities=9% Similarity=0.001 Sum_probs=59.2
Q ss_pred HHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhh---hHHHHHHHHHHHHH-HHHHHHhhccchhHHHHH
Q 012017 296 MTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTL---RTGLWSIWSQWFCL-LICVASIWIHNSLVAAYM 370 (473)
Q Consensus 296 mtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlv---rtGl~~l~~Q~~~L-~~~v~s~~~~~~~~s~~~ 370 (473)
...|+++ .|+++.+++.+.++-.+--..--+ +..+..|+++. |- |.+..++... ..+....-.+.+.....
T Consensus 48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr--~~l~~~~~l~~~~~~~~l~~~~~~~~~~- 123 (468)
T TIGR00788 48 LSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKR--WYLVLSGLLGSAILYGLLPGKVSSAKVA- 123 (468)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccch--HHHHHHHHHHHHHHHHhcccccchHHHH-
Confidence 3446665 499999999888888777666555 66677777632 33 3334333222 12211111111211111
Q ss_pred HHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhH
Q 012017 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN 410 (473)
Q Consensus 371 l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~ 410 (473)
.....+.=++--..|.+..-++=|..+ +++...++.|.
T Consensus 124 -~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s 161 (468)
T TIGR00788 124 -AAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVS 161 (468)
T ss_pred -HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeee
Confidence 112334445556778877767667666 44455555653
No 204
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.97 E-value=1.3e+02 Score=34.90 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=69.5
Q ss_pred hhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHHhc-CCCchHHHHHhHHHHHHHh-hHHhhHHHHHhhhhh--hhHHH
Q 012017 268 QVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWE-GIPAYIIGIARGISATIGI-AATILYPILQSRIST--LRTGL 342 (473)
Q Consensus 268 ~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl-~gT~~~p~l~~riGl--vrtGl 342 (473)
+.=.+.|+|.--......+..+. |+-.-+==||.+| |.|.+....+-|.=++.+. +|+++.-+++||+-+ ..+..
T Consensus 386 ~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~ 465 (735)
T KOG3626|consen 386 KRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAK 465 (735)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHH
Confidence 44467888887777777776643 5555566689987 9999999998877666665 899999999998765 56777
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 012017 343 WSIWSQWFCLLICVASIWI 361 (473)
Q Consensus 343 ~~l~~Q~~~L~~~v~s~~~ 361 (473)
|.++.-.++++.....+++
T Consensus 466 ~~~~~~~l~l~~~~~~~~i 484 (735)
T KOG3626|consen 466 FVIVCSVLSLLFYSLLFFI 484 (735)
T ss_pred HHHHHHHHHHHHHHHHHEe
Confidence 7777776666665555555
No 205
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=42.23 E-value=19 Score=30.22 Aligned_cols=21 Identities=33% Similarity=0.572 Sum_probs=16.2
Q ss_pred hhhHHHH-HHHHHHHHHHHHHH
Q 012017 337 TLRTGLW-SIWSQWFCLLICVA 357 (473)
Q Consensus 337 lvrtGl~-~l~~Q~~~L~~~v~ 357 (473)
++|=|++ |-++|.+|++++++
T Consensus 21 llRYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 21 LLRYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHHHheee
Confidence 3455555 88999999998876
No 206
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=40.50 E-value=1.3e+02 Score=32.49 Aligned_cols=78 Identities=24% Similarity=0.343 Sum_probs=58.3
Q ss_pred HHHHHhhhc----CCchhHHHHHHhc-CCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 012017 282 LALLFFTVL----SFGTLMTATLEWE-GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV 356 (473)
Q Consensus 282 lalLY~TVL----sf~~lmtaYl~~~-G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v 356 (473)
++++|+-+. +|+....-|++++ |.++..-|..-..++..|-+.=-+.-++..|+|-.|.=++..+. .++...+
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~--~~~~~~~ 300 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVG--MALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHH--HHHHHHH
Confidence 577887764 4777777788886 99999989888888888888888899999999999986665543 2233334
Q ss_pred HHhhc
Q 012017 357 ASIWI 361 (473)
Q Consensus 357 ~s~~~ 361 (473)
.++..
T Consensus 301 l~~~~ 305 (417)
T COG2223 301 LSLFL 305 (417)
T ss_pred HHccc
Confidence 44444
No 207
>PRK05326 potassium/proton antiporter; Reviewed
Probab=39.98 E-value=3.1e+02 Score=30.46 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=59.4
Q ss_pred HhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhh
Q 012017 313 ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQ 392 (473)
Q Consensus 313 ~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi 392 (473)
.-++|.+.|+...+..+++.+|......+...+..=..++.....+-..+.|. -...++.|++.+.-
T Consensus 194 ~~~~g~~~G~~~g~l~~~l~~~~~~~~~~~~~i~~l~~~l~~~~~a~~lg~Sg-~la~~iaGl~l~n~------------ 260 (562)
T PRK05326 194 QFGLGALIGLLGGWLLVQLLNRIALPAEGLYPILVLAGALLIFALTAALGGSG-FLAVYLAGLVLGNR------------ 260 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHHHHHHCCcH-HHHHHHHHHHHhCC------------
Confidence 44678888998889999999888542334332221111222222222233332 35567788887632
Q ss_pred hccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCcch
Q 012017 393 MQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFW 434 (473)
Q Consensus 393 ~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~ 434 (473)
+..++..+...+..+..++..+.|++.=..-+|+++.
T Consensus 261 -----~~~~~~~i~~~~~~l~~l~~~~~Fv~lGl~~~~~~l~ 297 (562)
T PRK05326 261 -----PIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLL 297 (562)
T ss_pred -----cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 2223334556667777777777777765555676664
No 208
>PRK09669 putative symporter YagG; Provisional
Probab=39.56 E-value=2.9e+02 Score=28.94 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=63.0
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhh----hhhhhHHHHHHHHHHHHHHHHHHHhhccch--hHHHHHHHhhh
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQSR----ISTLRTGLWSIWSQWFCLLICVASIWIHNS--LVAAYMLMVGV 375 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~r----iGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~--~~s~~~l~~gi 375 (473)
.-|+|+..+|..-.++.+.....-.+..++..| .|-.|- |-++.-..+.+..+..++.|.. ......+....
T Consensus 39 ~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp--~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 39 VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRP--YLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcch--hHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 358899888888888887777776666666665 454343 2222222222223344555531 11111222222
Q ss_pred hhhcchhhhhhhhhhhhhcccc-CCCcccchhhhhHHHHHHHHHH
Q 012017 376 ATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 376 ~~SR~GLW~fDL~v~qi~Qe~V-~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
.+-..+.-.++....-+.=|.- +++||+..++......++--++
T Consensus 117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i 161 (444)
T PRK09669 117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI 161 (444)
T ss_pred HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2335555556655554444433 5678998888777666664443
No 209
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=38.07 E-value=5.6e+02 Score=27.89 Aligned_cols=132 Identities=15% Similarity=0.209 Sum_probs=70.2
Q ss_pred HHHHhhHHhhHHHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhcc
Q 012017 318 ATIGIAATILYPILQS--RISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 395 (473)
Q Consensus 318 av~Gl~gT~~~p~l~~--riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe 395 (473)
++.++.-.++.|.+-. ..+--|-- +-...-..|...+..-.+++.+.+ .....-.+++-++...--....-.+=|
T Consensus 77 sis~l~~all~P~lGa~aD~~~~Rk~-~l~~~~~~~~~~~~~l~~v~~~~~--~~~~~l~iia~v~~~~~~vfyna~LP~ 153 (477)
T PF11700_consen 77 SISGLLQALLAPFLGAIADYGGRRKR-FLLIFTLLGVLATALLWFVSPGQW--WLALVLFIIANVGYEASNVFYNAYLPD 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcccccchH-HHHHHHHHHHHHHHHHHHhCcchH--HHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 3455666677776633 12222222 223333444444444444432222 112222444556665555555555555
Q ss_pred ccCCCcc--------------------------cchhhhhHHHHHHHHHHHHHhHHhc-cCCCcc---hhHHHHHHHHHH
Q 012017 396 LVPESDR--------------------------CVVGGVQNSLQSTMDLMAYTMGIII-SNPQDF---WKLILISVIVVT 445 (473)
Q Consensus 396 ~V~e~~R--------------------------g~v~gvq~Sl~slf~ll~~v~~Ii~-~~P~~F---~~lv~iS~~~V~ 445 (473)
-.+++++ |+++|.-.++-++-.++..++.+.. -.|++. .+.+-+++..+.
T Consensus 154 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a 233 (477)
T PF11700_consen 154 LARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVA 233 (477)
T ss_pred hcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHH
Confidence 5555555 9999999999999999988876554 344444 344444444444
Q ss_pred HHHHHHH
Q 012017 446 LAAILYT 452 (473)
Q Consensus 446 ~a~~~y~ 452 (473)
.=..+|.
T Consensus 234 ~ww~vfs 240 (477)
T PF11700_consen 234 LWWLVFS 240 (477)
T ss_pred HHHHHHH
Confidence 4333343
No 210
>PRK09848 glucuronide transporter; Provisional
Probab=37.86 E-value=4.9e+02 Score=27.15 Aligned_cols=29 Identities=14% Similarity=0.114 Sum_probs=22.8
Q ss_pred HHHHHhhccceeecccccchhHHHHHHHH
Q 012017 43 SASIALFGPIVGHWVDKLTYVKVLQIWLV 71 (473)
Q Consensus 43 ~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~ 71 (473)
.+..++.++..|++.||.++.+++..+.+
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~ 302 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGAL 302 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34567788899999999998888766654
No 211
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=34.41 E-value=6.4e+02 Score=27.45 Aligned_cols=187 Identities=17% Similarity=0.117 Sum_probs=96.5
Q ss_pred ccchhhhhhccchhhhHHHHHHHhhhc-CCchhHHHHHHh-cCCCchHHHHHhH----HHHHHHhhHHhhHHHHHhhhhh
Q 012017 264 VGAWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARG----ISATIGIAATILYPILQSRIST 337 (473)
Q Consensus 264 ~~~w~~Y~~q~vflaslalalLY~TVL-sf~~lmtaYl~~-~G~s~~~ig~~Rg----~gav~Gl~gT~~~p~l~~riGl 337 (473)
.-+|+.-++.|.+++...-.+-+...+ -+-.-+=+|+++ -|++-..-|.+-+ ...++.+.+-.+.-++.+| ++
T Consensus 248 ~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~l 326 (466)
T KOG2532|consen 248 PVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-IL 326 (466)
T ss_pred CCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC
Confidence 357888888887776654433332210 011112234443 2444333333333 3444555666666667666 54
Q ss_pred hhHHHHHHHHHHHHHHHHHH----Hhhcc-chhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHH
Q 012017 338 LRTGLWSIWSQWFCLLICVA----SIWIH-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSL 412 (473)
Q Consensus 338 vrtGl~~l~~Q~~~L~~~v~----s~~~~-~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl 412 (473)
-.+-.-=+.-=..+..+++. ++... ....+..++..++.++=.-.=+|=.+.+. +.++.-+.+.|+-+-.
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~-----~apq~a~~l~g~~~~~ 401 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQD-----IAPQHAGFVMGIINFV 401 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhh-----ccchHHHHHHHHHHHH
Confidence 22221111111112222222 22222 12345555555554444433344333221 2556678888888877
Q ss_pred HHHHHHHHHH-hHHhcc--CCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 012017 413 QSTMDLMAYT-MGIIIS--NPQDFWKLILISVIVVTLAAILYTFHLY 456 (473)
Q Consensus 413 ~slf~ll~~v-~~Ii~~--~P~~F~~lv~iS~~~V~~a~~~y~~~~~ 456 (473)
-.+.-++.-. .+.+.+ .++|-.+.-++..+....+...|..|..
T Consensus 402 ~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 402 GALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred HHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 7777755444 445554 3568888888888888888888888863
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=33.24 E-value=5.7e+02 Score=29.21 Aligned_cols=37 Identities=8% Similarity=0.053 Sum_probs=27.5
Q ss_pred HHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHH
Q 012017 309 IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 348 (473)
Q Consensus 309 ~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q 348 (473)
..+.+-+++-++++.|.+++ -+++|..||-+++....
T Consensus 28 i~~~f~~l~yl~pilGg~iA---D~~lG~~~tIl~~~ii~ 64 (654)
T TIGR00926 28 LFHTFTYLCYLTPLIGAIIA---DGWLGKFKTILYLSIVY 64 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHH
Confidence 56777888888888888877 56788888877755543
No 213
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=32.37 E-value=2.1e+02 Score=26.38 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=43.4
Q ss_pred hHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCc
Q 012017 323 AATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV-AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESD 401 (473)
Q Consensus 323 ~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~-s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~ 401 (473)
.+.+..|.+.+++|.-++=..+.. |-.+-+++++.|.... -..-.+.|+..+- ||.---+ .+=+.-+|++
T Consensus 52 ~s~l~~P~iv~~lg~K~sm~lg~~----~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~--lW~aqg~---ylt~~s~~~~ 122 (156)
T PF05978_consen 52 ISCLFAPSIVNKLGPKWSMILGSL----GYAIYIASFFYPNSYTLYPASALLGFGAAL--LWTAQGT---YLTSYSTEET 122 (156)
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHH----HHHHHHHHHHhhhHHHHHHHHHHHhhhhHH--hhHhhhH---HHHHcCCHHH
Confidence 556778999999997655333332 2233344455543211 1222233444443 4765422 2224456677
Q ss_pred ccchhhhhHHHHH
Q 012017 402 RCVVGGVQNSLQS 414 (473)
Q Consensus 402 Rg~v~gvq~Sl~s 414 (473)
|++-.|..-++.+
T Consensus 123 ~~~~~~ifw~i~~ 135 (156)
T PF05978_consen 123 IGRNTGIFWAIFQ 135 (156)
T ss_pred HhhHHHHHHHHHH
Confidence 7776666655554
No 214
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=30.18 E-value=1.2e+02 Score=30.66 Aligned_cols=53 Identities=19% Similarity=0.272 Sum_probs=34.7
Q ss_pred hhhhhhhhhhHhhhhhhhhHHHHHHhhhhh----------HHHHHHHHHHHhHHHHHHHHHHHHH
Q 012017 144 TKMNSIIRRIDLTCKLLAPAITGFIISFVS----------LQASAMTLAIWTTVTVWVEYWLFMS 198 (473)
Q Consensus 144 a~~Na~mRRIDL~ckllaPl~vG~l~t~~s----------~~~~~~~i~~~N~~S~~vEy~~l~~ 198 (473)
.++|..||++...+-++.|.- ++.+.+| ...|...+.+..++....-|+++++
T Consensus 252 ~~~N~~mk~LTvvt~IflP~t--~IaGiyGMNf~~mP~l~~~~gy~~~l~~m~~i~~~~~~~fkr 314 (318)
T TIGR00383 252 NKMNEIMKILTVVSTIFIPLT--FIAGIYGMNFKFMPELNWKYGYPAVLIVMAVIALGPLIYFRR 314 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCcccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999963 2322222 3455555555555566666666553
No 215
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=29.81 E-value=4.9 Score=41.90 Aligned_cols=131 Identities=14% Similarity=0.151 Sum_probs=77.2
Q ss_pred hHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhh
Q 012017 308 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDL 387 (473)
Q Consensus 308 ~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL 387 (473)
...+..-+...+-.+.|.++++.+.+|+|--++=..+.....+. ++...+.+.. .+...+..+-.+.=+|.=+.-.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~---~~~~~~~~~~-~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIG---SILIAFAPSY-NNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccc---cccccccccc-cccccccccccccccccccccc
Confidence 35677778888888899999999999999665533333322111 1122222200 1222222222222122212334
Q ss_pred hhhhhhccccCCCcccchhhhhHHHHHHHHHHHHHhHHhccCCCc---chhHHHHHHH
Q 012017 388 SVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQD---FWKLILISVI 442 (473)
Q Consensus 388 ~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~---F~~lv~iS~~ 442 (473)
...-++.|..|+++||...+.+.....+=.++...++....+..+ .+++..+...
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 566678899999999999998888877777777777666655444 4444444433
No 216
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=28.29 E-value=3.2e+02 Score=31.56 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=42.3
Q ss_pred cchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHH
Q 012017 13 CRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKV 65 (473)
Q Consensus 13 dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v 65 (473)
+-.|.++++.+++-. +..++.-.+|....+..+.+|...+...|..+|.+.
T Consensus 5 ~~~~~~~l~v~ia~~--~~~~~~~~~g~~~~~i~l~lG~ia~~l~D~~~~~~~ 55 (701)
T TIGR01667 5 NQKLVYCLPVFIALM--GAELRIWWFGLLFLLIPLCLGIIAAGLDDLDDRLTG 55 (701)
T ss_pred hhHHHHHHHHHHHHH--HHHHHHHHhCCccHHHHHHHhhHhhccCCCCccHHH
Confidence 445778888888875 455666779999999999999999999999998765
No 217
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=28.21 E-value=8.3e+02 Score=26.79 Aligned_cols=139 Identities=12% Similarity=0.088 Sum_probs=78.3
Q ss_pred hhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhh--------hhhHH
Q 012017 270 YLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRIS--------TLRTG 341 (473)
Q Consensus 270 Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riG--------lvrtG 341 (473)
+.-|--+-.=++++..|+|=-+|+-.|-+-..+-|+|-.++|++-+.-.++==.+-++.-.+..|.+ ++-+|
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 3334344456799999999888876555444445599999999876655554567777777877764 44455
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHhhhhhhcc-hhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHHH
Q 012017 342 LWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRL-GLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 420 (473)
Q Consensus 342 l~~l~~Q~~~L~~~v~s~~~~~~~~s~~~l~~gi~~SR~-GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll~ 420 (473)
+..+..=..- |..+|..-..+.-+ ==|+.--|. ..+=.+-|.+|||+.-++=|.=.|+=..+.
T Consensus 106 i~nil~Gfs~---------------s~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~ 169 (448)
T COG2271 106 IVNILFGFSP---------------SLFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALA 169 (448)
T ss_pred HHHHHHhhhh---------------HHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchH
Confidence 4433332211 11111111111000 001111111 122234699999999988777777665554
Q ss_pred HHhH
Q 012017 421 YTMG 424 (473)
Q Consensus 421 ~v~~ 424 (473)
-.++
T Consensus 170 ~~~~ 173 (448)
T COG2271 170 PLVA 173 (448)
T ss_pred HHHH
Confidence 4444
No 218
>PF14986 DUF4514: Domain of unknown function (DUF4514)
Probab=27.56 E-value=40 Score=25.97 Aligned_cols=36 Identities=31% Similarity=0.398 Sum_probs=29.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhCCccChh
Q 012017 431 QDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFD 466 (473)
Q Consensus 431 ~~F~~lv~iS~~~V~~a~~~y~~~~~~~rghl~h~~ 466 (473)
-+|++.++.-...|..++...+.-..-.|+||+..|
T Consensus 18 id~KYa~IGtalGvaisAgFLaLKicmIrkhlfD~d 53 (61)
T PF14986_consen 18 IDIKYAIIGTALGVAISAGFLALKICMIRKHLFDND 53 (61)
T ss_pred eeeeeeeehhHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 368888888888888888887777777899999764
No 219
>PF13347 MFS_2: MFS/sugar transport protein
Probab=27.41 E-value=88 Score=32.67 Aligned_cols=124 Identities=13% Similarity=0.131 Sum_probs=68.6
Q ss_pred hcCCCchHHHHHhHHHHHHHhhHHhhHHHHHh----hhhhhhHHHHHHHHHHHHHHHHHHHhhc-cc--hh-HHHHHHHh
Q 012017 302 WEGIPAYIIGIARGISATIGIAATILYPILQS----RISTLRTGLWSIWSQWFCLLICVASIWI-HN--SL-VAAYMLMV 373 (473)
Q Consensus 302 ~~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~----riGlvrtGl~~l~~Q~~~L~~~v~s~~~-~~--~~-~s~~~l~~ 373 (473)
..|+++..+|..-.++-+.+...-.+.-.+.. |.|-.|- |-+.-...+.+..+.-++. |. +. ....-++.
T Consensus 31 ~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp--~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 31 VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP--WILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccce--EeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence 45999999999999888888766655555555 6664332 2111111222222222223 21 11 11112233
Q ss_pred hhhhhcchhhhhhhhhhhhhccccC-CCcccchhhhhHHHHHHHHH-HHHHhHHhc
Q 012017 374 GVATSRLGLWMFDLSVIQQMQDLVP-ESDRCVVGGVQNSLQSTMDL-MAYTMGIII 427 (473)
Q Consensus 374 gi~~SR~GLW~fDL~v~qi~Qe~V~-e~~Rg~v~gvq~Sl~slf~l-l~~v~~Ii~ 427 (473)
...+-.++.=.+|....-++=|..+ ++||...++.+.....+-.+ ...+...+.
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3333355555555554555555554 56999999999988888774 444444544
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=27.21 E-value=0.8 Score=47.86 Aligned_cols=118 Identities=15% Similarity=0.038 Sum_probs=63.9
Q ss_pred HHHhcCCCch-HHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHhhcc-chhHHHHHHHhhh
Q 012017 299 TLEWEGIPAY-IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV-ASIWIH-NSLVAAYMLMVGV 375 (473)
Q Consensus 299 Yl~~~G~s~~-~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v-~s~~~~-~~~~s~~~l~~gi 375 (473)
..++.|+++. ... .+..+..+.+++..-.+.+|+|--+.=+.+.....+|..+.. ...+.+ ++.......+...
T Consensus 279 i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 355 (451)
T PF00083_consen 279 IFENAGISNSFLAT---LILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFL 355 (451)
T ss_pred cccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceee
Confidence 3345677776 222 233355667777777888888865555555555444433221 122222 2101111111122
Q ss_pred hhhcchhh-hhhhhhhhhhccccCCCcccchhhhhHHHHHHHHHH
Q 012017 376 ATSRLGLW-MFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLM 419 (473)
Q Consensus 376 ~~SR~GLW-~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~ll 419 (473)
.+.-.+.. ++......+..|..|.+.|++..|.-.+...+...+
T Consensus 356 ~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i 400 (451)
T PF00083_consen 356 ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI 400 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccc
Confidence 22222111 333334456689999999999999999988866644
No 221
>COG3300 MHYT domain (predicted integral membrane sensor domain) [Signal transduction mechanisms]
Probab=24.05 E-value=7.4e+02 Score=24.81 Aligned_cols=124 Identities=23% Similarity=0.237 Sum_probs=74.2
Q ss_pred HHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc----------------chhHHHHHHHhhhhhh
Q 012017 315 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH----------------NSLVAAYMLMVGVATS 378 (473)
Q Consensus 315 g~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~----------------~~~~s~~~l~~gi~~S 378 (473)
.++.+.-+.|.+..=.|-+|.. ..+|.+.-+|++.--...-.++|.. ++.....-++..+..|
T Consensus 13 ~la~~va~~a~y~al~l~~r~~-~~~g~~~~~WL~~~a~~~G~gIWatHFVaMLAf~~~ipi~YDp~~T~lSl~iAv~~s 91 (236)
T COG3300 13 ALAVLVAILASYTALDLASRAR-GATGRQSRIWLLLGAFAMGLGIWATHFVAMLAFHPGIPIGYDPFLTGLSLLIAVAGS 91 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hCccchhHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCcccChHHHHHHHHHHHHHH
Confidence 3455666777777777778776 3457777777765544445567752 2456666778889999
Q ss_pred cchhhhhhhhhhhhhccccCCCcccchhhhhH-----HHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHHHHHH
Q 012017 379 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN-----SLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAA 448 (473)
Q Consensus 379 R~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~-----Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V~~a~ 448 (473)
=.||| ++ +-- ++.+|-.++|+-. ++-+.=---..+.+++.-||.-|..-++++..+=..+-
T Consensus 92 ~~al~---vs--~~~----~~~~~~l~Gg~llGlgIAaMHYtGMaA~~~~g~I~y~~~~v~~Svliav~as~~AL 157 (236)
T COG3300 92 AAALW---VS--AAR----LRLYRLLVGGLLLGLGIAAMHYTGMAAMEVQGTIVYDPALVALSVLIAVAASFVAL 157 (236)
T ss_pred HHHHH---HH--hcc----ccccchhHHHHHHhhhHHHHHHhhHHHHHHcceeeechHHHHHHHHHHHHHHHHHH
Confidence 99999 22 222 3334444444332 22222222233445888888888777776665544443
No 222
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=23.69 E-value=1.6e+02 Score=21.59 Aligned_cols=26 Identities=31% Similarity=0.484 Sum_probs=21.6
Q ss_pred hcCC-chhHHHHHHHHHHHHHHhhccc
Q 012017 27 VWPD-SLLFAAIYGAVESASIALFGPI 52 (473)
Q Consensus 27 l~p~-sLl~~svygl~~~~s~i~fg~~ 52 (473)
++|- +...++.|||..=.+++++||.
T Consensus 15 l~PiLsV~~V~~YGF~vWm~Q~~~GpP 41 (42)
T TIGR02973 15 IWPVLSVITVGGYGFAVWMYQILAGPP 41 (42)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4552 7788999999999999999873
No 223
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=22.74 E-value=1e+03 Score=26.08 Aligned_cols=44 Identities=14% Similarity=0.068 Sum_probs=27.2
Q ss_pred hhhhhhhHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 012017 156 TCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVY 200 (473)
Q Consensus 156 ~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY 200 (473)
.--.++|++.|.+....++..+..+.+...++.+ +-+++.++.+
T Consensus 149 lG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l-i~~~~~~~~l 192 (493)
T PRK15462 149 VGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL-VIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH-HHHHHhhhhh
Confidence 3679999999999877777766554333333333 3344444444
No 224
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=22.10 E-value=9.7e+02 Score=26.71 Aligned_cols=166 Identities=18% Similarity=0.250 Sum_probs=99.4
Q ss_pred chhHHHHHHHHHHhcCCchhHH--------------------HHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhh
Q 012017 14 RMWEFSVGLYMISVWPDSLLFA--------------------AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 73 (473)
Q Consensus 14 RmweFav~L~L~~l~p~sLl~~--------------------svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Q 73 (473)
|=|.|+..-.++|+|| ++... +.|++.-+.+-++-|...+.+..+.+++.--...+..|
T Consensus 146 ~~Ws~s~~Yi~aELWg-slV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~ 224 (509)
T COG3202 146 GEWSYSLFYIMAELWG-SLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQ 224 (509)
T ss_pred cchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHH
Confidence 3499999999999998 55444 78888888888888888877777677665555556777
Q ss_pred hHHHHHHHHHHHHHHhhc---------cc-------c--cc----hh---------HHHHHHHHHHHHHHHHHHHHhhhh
Q 012017 74 NLSFIVAGVSVITLLFFS---------SL-------K--ST----NF---------IAFVLLVILTNISGAVGVISTLAG 122 (473)
Q Consensus 74 n~sv~~s~~~~~~ll~~~---------~~-------~--~~----~~---------~~~~~l~~l~~~~~~i~~Las~a~ 122 (473)
++.++..+..++.++.+. +. + .. +. +-|... =++..++-...
T Consensus 225 ~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~-------ial~vl~Y~v~ 297 (509)
T COG3202 225 ILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGA-------IALLVLAYGVS 297 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHH-------HHHHHHHHHHH
Confidence 777666665444333321 00 0 00 00 011111 12223444444
Q ss_pred hhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhH----HHHHHhhhhhHHHHHHHHHHHhHHHH
Q 012017 123 TILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPA----ITGFIISFVSLQASAMTLAIWTTVTV 189 (473)
Q Consensus 123 ~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl----~vG~l~t~~s~~~~~~~i~~~N~~S~ 189 (473)
.--+|=-|=..+...-+ . -..=|+-|-|+|..+.++.-+ ..|.++-..|...++++.=.+-+++-
T Consensus 298 inLvE~~wKs~ik~~~~-~-~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg 366 (509)
T COG3202 298 INLVEGVWKSGIKELYP-T-TNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITG 366 (509)
T ss_pred HHHHHHHHHHhHHHhcC-C-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 45566666555544332 2 234788999999988887443 44556666777776666555555553
No 225
>cd03495 SQR_TypeC_SdhD_like Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit-like; composed of predominantly uncharacterized bacterial proteins with similarity to the E. coli SdhD subunit. One characterized protein is the respiratory Complex II SdhD subunit of the only eukaryotic member, Reclinomonas americana. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. It is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. E. coli SQR is classified as Type C SQRs because it contains two transmembrane subunits and one heme group. The SdhD and SdhC subunits are membrane anchor subunits containing heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is
Probab=21.96 E-value=93 Score=26.57 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=51.4
Q ss_pred ccchhhhhhccc---hhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHhh
Q 012017 264 VGAWQVYLKQEV---VLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATIL 327 (473)
Q Consensus 264 ~~~w~~Y~~q~v---flaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~~ 327 (473)
.+.|+.++++|. +..-+-++.+|..-+|-.....=|-++.+..-..+.....++.+.++.|++.
T Consensus 32 y~~~~~~~~~p~~~i~~~l~l~~~~~H~~~Gm~~IieDYV~~~~~R~~l~~~~~~~~~~~~~~~~~a 98 (100)
T cd03495 32 YAEVVAWLAHPFNAILLILTLVSAFYHARLGMQVVIEDYVHSEGLRLALIIAVKLFAIATAAAGIFA 98 (100)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999994 4444455777778888888888899999988889999999998888887753
No 226
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=21.29 E-value=1.8e+02 Score=22.71 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=31.2
Q ss_pred cchhHHHHHHHHHH-hcCC-chhHHHHHHHHHHHHHHhhccc
Q 012017 13 CRMWEFSVGLYMIS-VWPD-SLLFAAIYGAVESASIALFGPI 52 (473)
Q Consensus 13 dRmweFav~L~L~~-l~p~-sLl~~svygl~~~~s~i~fg~~ 52 (473)
+|-=|.-..+||+- ++|= +...++.|||..=..++++||.
T Consensus 13 ~k~~E~~~flfl~~~l~PiL~v~~Vg~YGF~VWm~Q~~~GpP 54 (56)
T PF06796_consen 13 TKRSELKAFLFLAVVLFPILAVAFVGGYGFIVWMYQIFFGPP 54 (56)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 56666667776665 5673 7788999999999999988873
No 227
>PF12832 MFS_1_like: MFS_1 like family
Probab=20.20 E-value=1.3e+02 Score=24.30 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=30.4
Q ss_pred chhHHHHHHHHHHHHHHhhccceeecccccchhHHHHH
Q 012017 31 SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQI 68 (473)
Q Consensus 31 sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~ 68 (473)
|=.-+++-.-+..+..++..|..|...||..|.+.+..
T Consensus 33 ~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 33 SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 44556667777888999999999999999998887543
Done!