Query         012021
Match_columns 472
No_of_seqs    429 out of 2598
Neff          8.1 
Searched_HMMs 46136
Date          Fri Mar 29 07:47:10 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012021.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012021hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0583 Serine/threonine prote 100.0 1.1E-62 2.3E-67  499.5  29.3  340    6-348    13-368 (370)
  2 KOG0575 Polo-like serine/threo 100.0 6.5E-61 1.4E-65  487.9  25.3  263   11-276    19-282 (592)
  3 KOG0615 Serine/threonine prote 100.0 1.7E-61 3.7E-66  471.0  17.5  259    8-269   170-443 (475)
  4 KOG0588 Serine/threonine prote 100.0 2.6E-60 5.6E-65  485.1  20.4  259    9-270    11-270 (786)
  5 KOG0598 Ribosomal protein S6 k 100.0 6.2E-58 1.3E-62  443.0  21.3  259    7-268    22-286 (357)
  6 KOG0616 cAMP-dependent protein 100.0 7.1E-58 1.5E-62  429.3  19.5  256    7-268    41-302 (355)
  7 KOG0592 3-phosphoinositide-dep 100.0 2.6E-57 5.6E-62  454.8  20.9  260    8-268    71-343 (604)
  8 KOG0581 Mitogen-activated prot 100.0 3.4E-55 7.3E-60  424.1  21.9  257    7-270    76-342 (364)
  9 KOG0595 Serine/threonine-prote 100.0 2.8E-54 6.1E-59  421.0  22.1  259    7-270     7-275 (429)
 10 KOG0585 Ca2+/calmodulin-depend 100.0 5.3E-54 1.2E-58  424.6  21.4  269    4-272    91-381 (576)
 11 KOG0605 NDR and related serine 100.0 4.8E-54   1E-58  431.6  21.2  260    7-268   138-450 (550)
 12 KOG0611 Predicted serine/threo 100.0 7.6E-55 1.6E-59  422.4  14.6  264    7-274    50-314 (668)
 13 KOG0694 Serine/threonine prote 100.0 3.8E-53 8.3E-58  435.6  25.6  261    5-268   363-629 (694)
 14 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-54 3.8E-59  396.5   6.0  260    5-269     6-273 (355)
 15 KOG0591 NIMA (never in mitosis 100.0 6.1E-54 1.3E-58  400.0   6.9  248    6-257    15-275 (375)
 16 KOG0661 MAPK related serine/th 100.0 2.7E-52 5.8E-57  413.0  15.0  263    3-271     3-299 (538)
 17 KOG0580 Serine/threonine prote 100.0 1.4E-52 3.1E-57  383.2  12.0  259    5-268    17-278 (281)
 18 KOG0198 MEKK and related serin 100.0 1.4E-51   3E-56  404.1  18.8  259   10-271    17-284 (313)
 19 KOG0593 Predicted protein kina 100.0   3E-52 6.6E-57  392.1  13.4  256    9-267     1-288 (396)
 20 KOG0597 Serine-threonine prote 100.0 4.1E-52 8.9E-57  417.6  14.7  257    9-270     1-258 (808)
 21 PTZ00263 protein kinase A cata 100.0 1.4E-50 3.1E-55  407.4  24.9  256    7-268    15-276 (329)
 22 cd05612 STKc_PRKX_like Catalyt 100.0 2.4E-50 5.2E-55  398.5  22.3  253   10-268     1-259 (291)
 23 KOG0032 Ca2+/calmodulin-depend 100.0 5.5E-50 1.2E-54  406.7  24.9  259    7-269    32-299 (382)
 24 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-49 2.5E-54  399.7  26.6  250   16-268     1-256 (323)
 25 KOG4717 Serine/threonine prote 100.0 5.3E-51 1.2E-55  405.3  16.2  261    8-272    16-279 (864)
 26 KOG0600 Cdc2-related protein k 100.0 4.7E-50   1E-54  399.6  19.8  258    8-268   115-405 (560)
 27 PTZ00426 cAMP-dependent protei 100.0 2.1E-49 4.4E-54  400.9  24.7  258    5-268    25-289 (340)
 28 KOG0610 Putative serine/threon 100.0   8E-50 1.7E-54  390.0  18.2  264    5-269    72-398 (459)
 29 cd05585 STKc_YPK1_like Catalyt 100.0 6.5E-49 1.4E-53  392.2  24.2  249   18-269     1-253 (312)
 30 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-48 3.5E-53  391.4  27.1  254   12-268     1-262 (324)
 31 cd05593 STKc_PKB_gamma Catalyt 100.0   2E-48 4.3E-53  391.7  27.4  250   16-268     1-256 (328)
 32 KOG0578 p21-activated serine/t 100.0 1.1E-49 2.4E-54  402.9  18.1  254    9-268   272-528 (550)
 33 KOG0582 Ste20-like serine/thre 100.0 9.1E-49   2E-53  385.3  23.9  262    6-270    22-300 (516)
 34 cd05595 STKc_PKB_beta Catalyti 100.0 1.7E-48 3.7E-53  391.3  26.5  250   16-268     1-256 (323)
 35 KOG0599 Phosphorylase kinase g 100.0 2.2E-50 4.7E-55  374.6  10.6  257    8-268    15-288 (411)
 36 cd05628 STKc_NDR1 Catalytic do 100.0 1.8E-48 3.8E-53  397.4  25.7  257   10-268     1-298 (363)
 37 KOG0586 Serine/threonine prote 100.0 1.7E-49 3.6E-54  404.8  17.7  261    7-271    53-314 (596)
 38 KOG0659 Cdk activating kinase  100.0   8E-49 1.7E-53  363.4  19.3  255   10-268     2-286 (318)
 39 KOG0690 Serine/threonine prote 100.0 8.5E-50 1.8E-54  378.3  12.6  262    4-268   162-429 (516)
 40 cd05600 STKc_Sid2p_Dbf2p Catal 100.0   3E-48 6.4E-53  390.8  24.7  253   10-268     1-262 (333)
 41 cd05598 STKc_LATS Catalytic do 100.0 5.4E-48 1.2E-52  395.4  26.9  257   10-268     1-306 (376)
 42 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-48 6.3E-53  395.5  24.6  257   10-268     1-301 (364)
 43 cd05631 STKc_GRK4 Catalytic do 100.0 3.1E-48 6.8E-53  382.1  23.9  254   11-268     1-266 (285)
 44 cd05626 STKc_LATS2 Catalytic d 100.0 5.8E-48 1.3E-52  396.1  26.4  258   11-269     2-311 (381)
 45 cd05620 STKc_nPKC_delta Cataly 100.0 4.4E-48 9.4E-53  387.1  24.8  251   16-269     1-254 (316)
 46 cd05587 STKc_cPKC Catalytic do 100.0 5.2E-48 1.1E-52  387.7  25.4  255   11-268     1-262 (324)
 47 cd05590 STKc_nPKC_eta Catalyti 100.0 3.4E-48 7.4E-53  388.6  23.5  250   16-268     1-258 (320)
 48 cd05596 STKc_ROCK Catalytic do 100.0 5.3E-48 1.1E-52  395.0  25.3  262    7-269    40-310 (370)
 49 cd05629 STKc_NDR_like_fungal C 100.0 4.4E-48 9.6E-53  396.3  24.5  257   10-268     1-310 (377)
 50 cd05621 STKc_ROCK2 Catalytic d 100.0 6.6E-48 1.4E-52  394.3  25.2  263    6-269    39-310 (370)
 51 cd05625 STKc_LATS1 Catalytic d 100.0 7.4E-48 1.6E-52  395.3  25.6  257   10-268     1-310 (382)
 52 cd05591 STKc_nPKC_epsilon Cata 100.0   5E-48 1.1E-52  387.3  23.8  250   16-268     1-259 (321)
 53 cd05594 STKc_PKB_alpha Catalyt 100.0 3.7E-48   8E-53  389.0  22.4  250   16-268     1-257 (325)
 54 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.1E-48 8.9E-53  391.7  22.8  257   10-268     1-290 (350)
 55 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-47 3.7E-52  385.0  26.8  258   11-269     1-273 (332)
 56 cd05584 STKc_p70S6K Catalytic  100.0 1.6E-47 3.6E-52  384.0  26.3  251   15-268     1-261 (323)
 57 cd05592 STKc_nPKC_theta_delta  100.0 1.7E-47 3.6E-52  383.0  25.7  250   16-268     1-253 (316)
 58 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-47 3.5E-52  384.0  25.2  255   11-268     1-262 (323)
 59 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-47 3.2E-52  376.6  24.1  254   10-266     1-287 (287)
 60 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-47 3.7E-52  377.4  24.2  253    9-266     4-288 (288)
 61 cd05601 STKc_CRIK Catalytic do 100.0 2.4E-47 5.1E-52  383.6  25.2  257   10-268     1-268 (330)
 62 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-47   4E-52  384.7  24.3  250   16-268     1-267 (329)
 63 cd05570 STKc_PKC Catalytic dom 100.0 3.1E-47 6.8E-52  381.2  25.2  251   16-269     1-258 (318)
 64 cd05627 STKc_NDR2 Catalytic do 100.0 2.1E-47 4.6E-52  388.9  23.8  257   10-268     1-298 (360)
 65 cd05619 STKc_nPKC_theta Cataly 100.0 3.6E-47 7.9E-52  380.5  25.1  251   16-269     1-254 (316)
 66 KOG0660 Mitogen-activated prot 100.0 4.2E-48 9.2E-53  373.3  17.3  260    8-269    20-316 (359)
 67 cd05575 STKc_SGK Catalytic dom 100.0 5.4E-47 1.2E-51  380.2  26.1  250   16-268     1-256 (323)
 68 cd05618 STKc_aPKC_iota Catalyt 100.0 4.1E-47 8.9E-52  382.3  24.6  250   16-268     1-267 (329)
 69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-47   9E-52  377.2  24.1  256    9-269     4-294 (303)
 70 cd05604 STKc_SGK3 Catalytic do 100.0 6.6E-47 1.4E-51  379.9  25.8  250   16-268     1-256 (325)
 71 cd05622 STKc_ROCK1 Catalytic d 100.0 6.8E-47 1.5E-51  387.0  25.5  263    6-269    39-310 (371)
 72 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-46 2.4E-51  377.5  26.4  250   16-268     1-256 (321)
 73 cd05615 STKc_cPKC_alpha Cataly 100.0 7.3E-47 1.6E-51  379.4  24.9  255   11-268     1-262 (323)
 74 cd05582 STKc_RSK_N N-terminal  100.0   4E-47 8.6E-52  380.2  22.0  251   15-269     1-260 (318)
 75 KOG0192 Tyrosine kinase specif 100.0 9.7E-47 2.1E-51  380.0  23.4  250    7-262    38-298 (362)
 76 cd05586 STKc_Sck1_like Catalyt 100.0 4.5E-47 9.7E-52  381.8  20.5  249   18-268     1-258 (330)
 77 cd05617 STKc_aPKC_zeta Catalyt 100.0   4E-46 8.6E-51  374.7  27.3  250   16-268     1-265 (327)
 78 cd05608 STKc_GRK1 Catalytic do 100.0 1.6E-46 3.4E-51  369.0  23.6  248   18-268     1-262 (280)
 79 KOG0663 Protein kinase PITSLRE 100.0 4.5E-47 9.8E-52  361.4  18.5  258    8-269    74-367 (419)
 80 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-46   4E-51  376.6  23.7  250   16-268     1-256 (325)
 81 cd06649 PKc_MEK2 Catalytic dom 100.0 5.8E-46 1.3E-50  374.1  27.4  257    7-270     2-308 (331)
 82 cd05605 STKc_GRK4_like Catalyt 100.0 3.1E-46 6.7E-51  367.9  24.8  254   11-268     1-266 (285)
 83 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-46 5.9E-51  376.2  24.9  256   11-268     1-295 (338)
 84 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-46 9.5E-51  375.0  25.8  258   10-268     1-271 (331)
 85 KOG0201 Serine/threonine prote 100.0 1.8E-48   4E-53  383.0   7.4  255   10-269    13-269 (467)
 86 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-45 3.8E-50  370.7  28.1  258   10-268     1-271 (331)
 87 KOG0594 Protein kinase PCTAIRE 100.0   2E-46 4.3E-51  362.6  20.0  257    9-269    10-308 (323)
 88 PTZ00036 glycogen synthase kin 100.0 5.5E-46 1.2E-50  388.4  24.2  251    8-269    64-357 (440)
 89 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-45   3E-50  371.5  25.7  258   10-268     1-271 (332)
 90 PTZ00283 serine/threonine prot 100.0 9.8E-46 2.1E-50  391.6  25.8  259    8-268    30-302 (496)
 91 cd07862 STKc_CDK6 Catalytic do 100.0 9.6E-46 2.1E-50  364.3  23.5  251   10-266     1-290 (290)
 92 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.7E-45 3.8E-50  366.5  24.4  257    8-269     4-292 (309)
 93 cd05580 STKc_PKA Catalytic dom 100.0 3.2E-45   7E-50  361.1  25.8  253   10-268     1-259 (290)
 94 PLN00034 mitogen-activated pro 100.0 2.2E-45 4.7E-50  373.1  25.2  255    8-269    72-334 (353)
 95 cd07876 STKc_JNK2 Catalytic do 100.0 2.6E-45 5.7E-50  373.3  25.7  256    7-269    18-321 (359)
 96 PTZ00267 NIMA-related protein  100.0 3.4E-45 7.3E-50  386.4  27.2  256    9-268    66-328 (478)
 97 KOG0589 Serine/threonine prote 100.0 1.6E-46 3.5E-51  377.6  16.3  258    9-270     3-265 (426)
 98 cd06650 PKc_MEK1 Catalytic dom 100.0   4E-45 8.8E-50  368.4  25.8  257    7-270     2-306 (333)
 99 PF00069 Pkinase:  Protein kina 100.0 1.1E-45 2.4E-50  356.7  20.8  252   12-266     1-260 (260)
100 KOG0604 MAP kinase-activated p 100.0 9.6E-47 2.1E-51  354.4  12.6  255    5-271    56-330 (400)
101 PHA03212 serine/threonine kina 100.0 2.8E-45 6.1E-50  377.4  24.6  250    7-268    89-381 (391)
102 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-45 3.7E-50  372.1  22.0  256    7-269    12-304 (343)
103 KOG0667 Dual-specificity tyros 100.0 9.5E-46 2.1E-50  380.8  20.1  253    5-268   181-507 (586)
104 cd07853 STKc_NLK Catalytic dom 100.0 2.7E-45 5.9E-50  375.1  23.1  257   11-270     1-295 (372)
105 cd05630 STKc_GRK6 Catalytic do 100.0 6.8E-45 1.5E-49  358.4  25.0  254   11-268     1-266 (285)
106 cd06625 STKc_MEKK3_like Cataly 100.0 8.1E-45 1.8E-49  351.8  24.6  256   10-266     2-263 (263)
107 cd07863 STKc_CDK4 Catalytic do 100.0 6.9E-45 1.5E-49  357.6  23.7  250   11-266     1-288 (288)
108 cd05102 PTKc_VEGFR3 Catalytic  100.0 5.1E-45 1.1E-49  367.7  22.4  254    6-262     3-329 (338)
109 cd07874 STKc_JNK3 Catalytic do 100.0   7E-45 1.5E-49  369.5  23.5  256    7-269    14-317 (355)
110 KOG0986 G protein-coupled rece 100.0 9.1E-46   2E-50  364.1  16.2  258    7-268   182-451 (591)
111 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-44 2.8E-49  354.9  24.0  247   18-268     1-259 (277)
112 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-44 4.7E-49  354.7  25.6  255   11-269     1-267 (285)
113 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-44 3.9E-49  357.7  25.2  256    8-268     4-291 (301)
114 PTZ00284 protein kinase; Provi 100.0 6.8E-45 1.5E-49  383.2  23.4  252    8-270   127-445 (467)
115 KOG0658 Glycogen synthase kina 100.0 1.4E-45 2.9E-50  356.6  16.5  251    8-269    22-312 (364)
116 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-44 2.9E-49  368.8  24.6  255    7-268    21-323 (364)
117 cd08223 STKc_Nek4 Catalytic do 100.0 7.1E-44 1.5E-48  344.0  26.0  252   11-266     1-257 (257)
118 cd06628 STKc_MAPKKK_Byr2_like  100.0 5.4E-44 1.2E-48  347.1  25.0  255   11-266     1-267 (267)
119 KOG0612 Rho-associated, coiled 100.0 8.9E-46 1.9E-50  396.5  13.1  259    9-269    74-344 (1317)
120 cd05574 STKc_phototropin_like  100.0 7.7E-44 1.7E-48  355.4  26.2  258   10-268     1-294 (316)
121 cd06654 STKc_PAK1 Catalytic do 100.0 8.7E-44 1.9E-48  352.5  26.2  255    9-269    19-276 (296)
122 cd07861 STKc_CDK1_euk Catalyti 100.0 6.4E-44 1.4E-48  349.9  24.7  252   11-266     1-285 (285)
123 PHA03207 serine/threonine kina 100.0 4.2E-44 9.1E-49  369.0  24.1  254    5-268    87-380 (392)
124 cd06615 PKc_MEK Catalytic doma 100.0 9.5E-44 2.1E-48  354.2  25.8  253   10-269     1-293 (308)
125 cd05578 STKc_Yank1 Catalytic d 100.0 4.2E-44   9E-49  346.4  21.6  252   11-266     1-258 (258)
126 cd06655 STKc_PAK2 Catalytic do 100.0 1.7E-43 3.7E-48  350.5  26.3  255   10-270    19-276 (296)
127 KOG0607 MAP kinase-interacting 100.0 3.4E-45 7.3E-50  346.4  13.1  256   12-270    79-368 (463)
128 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.3E-43   5E-48  341.8  26.3  255   10-266     1-267 (267)
129 cd06656 STKc_PAK3 Catalytic do 100.0   1E-43 2.2E-48  352.2  23.6  257    9-271    18-277 (297)
130 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.4E-43 5.2E-48  345.7  25.8  254   10-266     1-286 (286)
131 cd07868 STKc_CDK8 Catalytic do 100.0 7.6E-44 1.6E-48  355.7  22.7  246   15-266     6-317 (317)
132 cd06609 STKc_MST3_like Catalyt 100.0 1.4E-43 3.1E-48  345.9  23.7  256   10-270     1-258 (274)
133 cd06611 STKc_SLK_like Catalyti 100.0 9.4E-44   2E-48  348.3  22.5  256    9-269     4-268 (280)
134 cd05609 STKc_MAST Catalytic do 100.0 2.4E-43 5.3E-48  350.4  25.6  258   10-268     1-278 (305)
135 cd08529 STKc_FA2-like Catalyti 100.0 3.6E-43 7.9E-48  338.6  26.0  252   11-266     1-256 (256)
136 cd06631 STKc_YSK4 Catalytic do 100.0 2.4E-43 5.2E-48  342.4  24.9  254   11-266     1-265 (265)
137 cd07839 STKc_CDK5 Catalytic do 100.0 5.7E-44 1.2E-48  350.3  20.7  252   11-266     1-284 (284)
138 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-43 2.3E-48  356.7  23.1  255   13-268     1-312 (327)
139 PHA03211 serine/threonine kina 100.0 1.5E-43 3.3E-48  370.4  25.0  250    8-268   167-460 (461)
140 cd08218 STKc_Nek1 Catalytic do 100.0 3.3E-43   7E-48  339.5  25.0  252   11-266     1-256 (256)
141 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-43 4.5E-48  346.2  23.9  254   11-267     1-286 (286)
142 PTZ00266 NIMA-related protein  100.0 1.8E-43 3.9E-48  388.6  26.0  262    3-269     6-301 (1021)
143 cd06619 PKc_MKK5 Catalytic dom 100.0 2.9E-43 6.4E-48  345.3  24.9  250   10-269     1-259 (279)
144 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-43   7E-48  347.0  25.2  261    4-269     6-275 (292)
145 cd06643 STKc_SLK Catalytic dom 100.0   4E-43 8.6E-48  344.5  25.2  255   11-270     6-269 (282)
146 cd06637 STKc_TNIK Catalytic do 100.0 2.2E-43 4.7E-48  343.8  23.0  253    8-266     4-272 (272)
147 cd06646 STKc_MAP4K5 Catalytic  100.0 1.9E-43   4E-48  343.6  22.4  253    8-265     7-267 (267)
148 cd06629 STKc_MAPKKK_Bck1_like  100.0 4.6E-43 9.9E-48  341.8  25.0  256   11-266     2-272 (272)
149 PHA02988 hypothetical protein; 100.0 3.6E-43 7.8E-48  346.2  24.4  245   11-263    19-275 (283)
150 cd05572 STKc_cGK_PKG Catalytic 100.0 3.5E-43 7.6E-48  340.7  23.9  247   18-268     1-257 (262)
151 cd05633 STKc_GRK3 Catalytic do 100.0 3.4E-43 7.3E-48  345.3  24.0  248   17-268     1-260 (279)
152 cd06645 STKc_MAP4K3 Catalytic  100.0 1.6E-43 3.6E-48  344.0  21.5  252    9-265     8-267 (267)
153 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.5E-43 3.2E-48  347.5  21.2  254   10-266     1-286 (286)
154 KOG0696 Serine/threonine prote 100.0   9E-45 1.9E-49  353.0  12.0  261    5-268   344-611 (683)
155 cd06622 PKc_MAPKK_PBS2_like Ca 100.0   2E-43 4.3E-48  347.1  21.8  255   10-270     1-269 (286)
156 cd07841 STKc_CDK7 Catalytic do 100.0 3.8E-43 8.2E-48  347.1  23.9  258   11-271     1-290 (298)
157 cd06630 STKc_MEKK1 Catalytic d 100.0 3.1E-43 6.8E-48  341.7  22.5  256   11-267     1-268 (268)
158 cd06651 STKc_MEKK3 Catalytic d 100.0 7.8E-43 1.7E-47  339.5  25.2  256   10-267     2-265 (266)
159 KOG0579 Ste20-like serine/thre 100.0   3E-45 6.4E-50  371.2   8.2  254   10-269    32-295 (1187)
160 cd05096 PTKc_DDR1 Catalytic do 100.0 5.4E-43 1.2E-47  347.6  24.3  253    7-262     2-300 (304)
161 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-43 4.9E-48  344.3  21.1  256   10-266     1-280 (280)
162 cd05106 PTKc_CSF-1R Catalytic  100.0 2.3E-43 4.9E-48  361.4  21.7  254    7-263    35-368 (374)
163 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-42 3.3E-47  334.8  26.3  252   11-266     1-256 (256)
164 cd06639 STKc_myosinIIIB Cataly 100.0   2E-42 4.3E-47  341.0  27.5  254    8-267    20-291 (291)
165 cd06917 STKc_NAK1_like Catalyt 100.0 6.9E-43 1.5E-47  341.4  23.8  256   11-270     2-262 (277)
166 cd05606 STKc_beta_ARK Catalyti 100.0 8.3E-43 1.8E-47  342.2  24.2  249   17-269     1-261 (278)
167 cd05048 PTKc_Ror Catalytic Dom 100.0 4.9E-43 1.1E-47  343.6  22.3  253    8-263     3-279 (283)
168 cd06640 STKc_MST4 Catalytic do 100.0 5.5E-43 1.2E-47  342.8  22.6  257    9-270     3-260 (277)
169 PHA03209 serine/threonine kina 100.0 3.2E-43 6.9E-48  358.0  21.6  246    9-268    65-356 (357)
170 cd08220 STKc_Nek8 Catalytic do 100.0 1.3E-42 2.8E-47  334.8  24.6  251   11-266     1-256 (256)
171 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-42 4.2E-47  336.3  25.8  256   10-267     2-265 (265)
172 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-42 3.5E-47  335.3  25.1  251    9-265     2-262 (262)
173 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-42 3.7E-47  334.6  25.1  248   11-263     1-252 (255)
174 cd05577 STKc_GRK Catalytic dom 100.0 8.2E-43 1.8E-47  341.6  23.1  247   18-268     1-259 (277)
175 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-42 3.2E-47  334.4  24.4  253   11-266     1-258 (258)
176 cd07845 STKc_CDK10 Catalytic d 100.0 9.9E-43 2.1E-47  346.5  23.9  258    8-269     5-296 (309)
177 cd05104 PTKc_Kit Catalytic dom 100.0   5E-43 1.1E-47  359.0  22.3  254    7-263    32-370 (375)
178 cd07833 STKc_CDKL Catalytic do 100.0   1E-42 2.3E-47  341.6  23.4  255   10-266     1-288 (288)
179 cd07860 STKc_CDK2_3 Catalytic  100.0 6.4E-43 1.4E-47  342.9  21.9  252   11-266     1-284 (284)
180 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-42 2.6E-47  340.8  23.7  252    8-266    14-282 (282)
181 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-42 2.5E-47  338.1  23.3  252    9-266     5-275 (275)
182 cd07849 STKc_ERK1_2_like Catal 100.0   1E-42 2.2E-47  351.0  23.7  260    8-270     3-299 (336)
183 cd05579 STKc_MAST_like Catalyt 100.0 7.1E-43 1.5E-47  337.4  21.6  250   18-268     1-262 (265)
184 KOG4236 Serine/threonine prote 100.0 3.8E-44 8.3E-49  357.2  12.9  249   16-271   570-827 (888)
185 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-42 3.6E-47  337.5  24.2  251    8-262     3-260 (266)
186 cd06658 STKc_PAK5 Catalytic do 100.0 6.1E-43 1.3E-47  345.9  21.3  255   10-270    22-279 (292)
187 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-42 3.3E-47  344.0  24.1  257    8-266    10-310 (310)
188 cd06638 STKc_myosinIIIA Cataly 100.0 2.3E-42 4.9E-47  339.3  24.7  253    8-266    16-286 (286)
189 cd07844 STKc_PCTAIRE_like Cata 100.0 1.9E-42 4.1E-47  340.9  24.2  253    9-266     4-291 (291)
190 cd07850 STKc_JNK Catalytic dom 100.0 2.3E-42   5E-47  350.9  25.2  257    7-270    13-318 (353)
191 cd06641 STKc_MST3 Catalytic do 100.0 2.7E-42 5.9E-47  337.9  24.7  255   11-270     5-260 (277)
192 cd06612 STKc_MST1_2 Catalytic  100.0 1.6E-42 3.5E-47  334.1  22.6  250    9-266     2-256 (256)
193 KOG0614 cGMP-dependent protein 100.0 1.2E-44 2.7E-49  359.8   7.9  258    7-268   417-682 (732)
194 KOG0197 Tyrosine kinases [Sign 100.0   4E-43 8.6E-48  354.3  18.9  241   11-261   207-455 (468)
195 cd08217 STKc_Nek2 Catalytic do 100.0 3.4E-42 7.3E-47  332.7  24.4  252   11-266     1-265 (265)
196 cd06626 STKc_MEKK4 Catalytic d 100.0 5.1E-42 1.1E-46  332.1  25.8  255   11-266     1-264 (264)
197 cd07867 STKc_CDC2L6 Catalytic  100.0 1.3E-42 2.8E-47  346.4  22.1  247   14-266     5-317 (317)
198 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.2E-42 6.9E-47  348.7  25.2  256    8-270    13-305 (343)
199 KOG4279 Serine/threonine prote 100.0 3.3E-43 7.1E-48  359.5  17.7  249   17-271   582-840 (1226)
200 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-42 7.7E-47  339.4  24.3  254   10-267     1-295 (295)
201 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-42   3E-47  336.6  20.9  252   10-268     1-262 (265)
202 cd07836 STKc_Pho85 Catalytic d 100.0 3.6E-42 7.7E-47  337.4  24.0  251   11-266     1-284 (284)
203 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.6E-43 1.2E-47  342.5  18.1  255   10-269     4-259 (277)
204 cd07831 STKc_MOK Catalytic dom 100.0 3.4E-42 7.4E-47  336.9  23.7  248   12-266     1-282 (282)
205 cd06647 STKc_PAK_I Catalytic d 100.0 2.7E-42 5.8E-47  341.3  22.7  256    9-270    18-276 (293)
206 cd08228 STKc_Nek6 Catalytic do 100.0 6.8E-42 1.5E-46  332.3  25.1  251   10-263     2-261 (267)
207 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.1E-42 8.8E-47  347.6  24.4  257    8-268     3-305 (342)
208 cd05062 PTKc_IGF-1R Catalytic  100.0 4.7E-42   1E-46  336.0  23.4  255    6-263     2-274 (277)
209 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.3E-42 1.6E-46  337.0  25.0  252   10-266     5-291 (291)
210 cd07843 STKc_CDC2L1 Catalytic  100.0 2.5E-42 5.3E-47  340.7  21.6  254    9-266     4-293 (293)
211 cd06659 STKc_PAK6 Catalytic do 100.0 3.1E-42 6.7E-47  341.7  22.4  255   11-271    22-279 (297)
212 cd05611 STKc_Rim15_like Cataly 100.0 4.4E-42 9.5E-47  332.6  22.9  246   16-268     2-256 (260)
213 cd06648 STKc_PAK_II Catalytic  100.0 1.2E-41 2.6E-46  335.2  26.2  254   11-270    20-276 (285)
214 cd05061 PTKc_InsR Catalytic do 100.0 7.3E-42 1.6E-46  336.9  24.4  259    6-267     2-284 (288)
215 PLN00009 cyclin-dependent kina 100.0   1E-41 2.2E-46  336.5  25.2  257    9-269     1-290 (294)
216 cd08225 STKc_Nek5 Catalytic do 100.0 6.2E-42 1.3E-46  330.2  23.1  252   11-266     1-257 (257)
217 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.1E-42 8.9E-47  337.8  22.2  255    9-270     4-273 (284)
218 cd05090 PTKc_Ror1 Catalytic do 100.0 8.1E-42 1.8E-46  335.3  24.2  252    9-263     4-279 (283)
219 cd05093 PTKc_TrkB Catalytic do 100.0   8E-42 1.7E-46  336.6  24.1  250    9-262     4-274 (288)
220 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-41 2.4E-46  330.9  24.7  251    7-263     3-258 (263)
221 cd05032 PTKc_InsR_like Catalyt 100.0 1.1E-41 2.3E-46  332.8  24.7  254    7-263     3-274 (277)
222 cd05049 PTKc_Trk Catalytic dom 100.0 3.9E-42 8.4E-47  336.4  21.6  251    9-262     4-276 (280)
223 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-41 2.4E-46  333.7  24.7  255   10-270     1-268 (283)
224 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-41 3.6E-46  326.2  25.3  252   11-266     1-258 (258)
225 cd07851 STKc_p38 Catalytic dom 100.0 4.5E-42 9.8E-47  347.4  22.5  256    7-269    12-304 (343)
226 cd07835 STKc_CDK1_like Catalyt 100.0 4.9E-42 1.1E-46  336.5  21.8  251   12-266     1-283 (283)
227 cd07842 STKc_CDK8_like Catalyt 100.0 5.9E-42 1.3E-46  341.0  22.7  255   11-266     1-316 (316)
228 cd06623 PKc_MAPKK_plant_like C 100.0 1.5E-41 3.3E-46  328.5  24.9  254   10-268     1-261 (264)
229 cd06606 STKc_MAPKKK Catalytic  100.0   2E-41 4.4E-46  325.2  25.6  254   11-266     1-260 (260)
230 cd05108 PTKc_EGFR Catalytic do 100.0 8.1E-42 1.8E-46  341.4  23.6  251    9-263     6-264 (316)
231 KOG0574 STE20-like serine/thre 100.0 5.2E-45 1.1E-49  342.6   0.3  251   11-269    34-289 (502)
232 KOG4645 MAPKKK (MAP kinase kin 100.0   2E-44 4.4E-49  390.4   4.7  259    9-268  1234-1499(1509)
233 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-41 5.4E-46  324.8  25.7  252   11-266     1-254 (254)
234 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-41 3.4E-46  337.8  25.1  257    6-269    11-273 (307)
235 cd05033 PTKc_EphR Catalytic do 100.0 1.9E-41 4.1E-46  329.5  25.1  252    9-263     3-261 (266)
236 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-41 2.9E-46  330.9  23.8  250   12-263     1-268 (273)
237 cd05084 PTKc_Fes Catalytic dom 100.0   1E-41 2.2E-46  328.5  22.7  244   16-262     1-248 (252)
238 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.3E-42 1.6E-46  345.0  22.6  257    8-268     3-296 (337)
239 cd07864 STKc_CDK12 Catalytic d 100.0 9.4E-42   2E-46  337.6  23.0  259    5-266     2-302 (302)
240 cd05088 PTKc_Tie2 Catalytic do 100.0   1E-41 2.3E-46  338.7  23.3  251    7-263     4-276 (303)
241 cd05054 PTKc_VEGFR Catalytic d 100.0 4.2E-42 9.1E-47  347.1  20.6  255    6-263     3-329 (337)
242 cd07855 STKc_ERK5 Catalytic do 100.0   6E-42 1.3E-46  345.1  21.4  260    8-269     3-300 (334)
243 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.6E-41 3.5E-46  343.7  24.6  256    8-270    15-307 (345)
244 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.2E-41 9.2E-46  326.9  26.4  255   10-266     2-264 (264)
245 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.6E-41 3.4E-46  332.5  23.5  253    8-263     4-274 (277)
246 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.8E-41 3.9E-46  337.3  24.1  255    6-263    14-295 (307)
247 cd05091 PTKc_Ror2 Catalytic do 100.0 6.5E-42 1.4E-46  335.8  20.6  253    8-263     3-279 (283)
248 cd06624 STKc_ASK Catalytic dom 100.0 2.8E-41 6.1E-46  328.7  24.8  248   14-266    12-268 (268)
249 PHA03390 pk1 serine/threonine- 100.0 1.3E-41 2.9E-46  331.9  22.6  244    9-267    13-266 (267)
250 cd00192 PTKc Catalytic domain  100.0 2.4E-41 5.3E-46  325.8  24.1  245   16-263     1-260 (262)
251 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.6E-41   1E-45  331.0  26.5  254   10-270     1-273 (287)
252 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-41 4.8E-46  333.7  24.1  254    7-263     9-287 (293)
253 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.3E-41   5E-46  327.1  23.7  246   10-262     4-253 (256)
254 cd07852 STKc_MAPK15 Catalytic  100.0 8.1E-42 1.7E-46  344.4  21.2  262    6-269     3-301 (337)
255 KOG0577 Serine/threonine prote 100.0 4.8E-43   1E-47  353.4  12.1  252   11-270    27-285 (948)
256 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-41 4.1E-46  330.1  23.1  250   12-263     1-267 (272)
257 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-41 2.9E-46  330.3  22.0  250   10-262     2-260 (267)
258 KOG0596 Dual specificity; seri 100.0 1.3E-42 2.8E-47  349.0  15.0  256    9-268   360-632 (677)
259 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.8E-41 8.2E-46  338.8  25.6  258    8-272     8-297 (328)
260 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-41 3.9E-46  325.6  22.3  246   18-266     1-250 (250)
261 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.8E-41 1.3E-45  325.3  26.0  250   10-262     2-260 (267)
262 PRK13184 pknD serine/threonine 100.0   2E-41 4.4E-46  371.0  25.2  253    9-262     1-284 (932)
263 KOG0603 Ribosomal protein S6 k 100.0 1.4E-42   3E-47  355.9  14.8  244    8-266   320-566 (612)
264 cd05051 PTKc_DDR Catalytic dom 100.0 2.7E-41 5.9E-46  333.3  23.4  252    8-262     3-292 (296)
265 PHA03210 serine/threonine kina 100.0 6.3E-42 1.4E-46  363.3  20.2  262    5-269   143-460 (501)
266 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.9E-41 4.2E-46  349.7  23.2  254    7-263    34-393 (400)
267 KOG0608 Warts/lats-like serine 100.0 4.8E-42   1E-46  348.3  18.2  256   11-268   630-933 (1034)
268 cd07866 STKc_BUR1 Catalytic do 100.0 2.5E-41 5.4E-46  335.4  23.1  260    5-266     3-311 (311)
269 cd05613 STKc_MSK1_N N-terminal 100.0 4.6E-41 9.9E-46  331.2  24.1  258   11-269     1-274 (290)
270 cd05059 PTKc_Tec_like Catalyti 100.0 3.3E-41 7.2E-46  326.2  22.4  247   10-263     4-254 (256)
271 cd07840 STKc_CDK9_like Catalyt 100.0 3.6E-41 7.9E-46  329.9  22.9  252   12-266     1-287 (287)
272 cd05055 PTKc_PDGFR Catalytic d 100.0 4.2E-41 9.2E-46  334.3  23.6  257    4-263    29-297 (302)
273 PTZ00024 cyclin-dependent prot 100.0 2.5E-41 5.5E-46  340.4  22.3  261    8-269     6-319 (335)
274 cd05072 PTKc_Lyn Catalytic dom 100.0 5.4E-41 1.2E-45  325.2  23.7  249    7-262     3-256 (261)
275 cd05109 PTKc_HER2 Catalytic do 100.0 6.5E-41 1.4E-45  328.2  24.5  253    7-263     4-264 (279)
276 cd05148 PTKc_Srm_Brk Catalytic 100.0   2E-41 4.4E-46  327.9  20.6  247    9-262     5-256 (261)
277 cd06657 STKc_PAK4 Catalytic do 100.0 3.7E-41   8E-46  333.3  22.8  254   12-271    22-278 (292)
278 cd05094 PTKc_TrkC Catalytic do 100.0 4.9E-41 1.1E-45  331.5  23.5  251    9-263     4-278 (291)
279 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-41 1.2E-45  326.2  23.4  248    7-262     3-255 (262)
280 cd05089 PTKc_Tie1 Catalytic do 100.0 5.5E-41 1.2E-45  332.3  23.8  248   10-263     2-271 (297)
281 cd05092 PTKc_TrkA Catalytic do 100.0 4.3E-41 9.3E-46  330.1  22.7  252    7-262     2-276 (280)
282 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.4E-41   2E-45  333.4  25.4  255    6-263     8-289 (314)
283 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.3E-41 1.1E-45  325.3  22.9  249    6-262     2-255 (260)
284 cd05045 PTKc_RET Catalytic dom 100.0 5.7E-41 1.2E-45  330.7  23.5  250   11-263     1-282 (290)
285 cd05122 PKc_STE Catalytic doma 100.0 1.6E-40 3.4E-45  317.7  25.8  248   11-265     1-253 (253)
286 cd08530 STKc_CNK2-like Catalyt 100.0 6.6E-41 1.4E-45  322.6  23.4  250   11-266     1-256 (256)
287 cd05068 PTKc_Frk_like Catalyti 100.0 8.8E-41 1.9E-45  323.9  24.2  249    7-262     3-256 (261)
288 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.3E-41   2E-45  327.8  24.5  251    9-262     2-276 (283)
289 KOG1989 ARK protein kinase fam 100.0 8.2E-42 1.8E-46  361.7  18.0  246   10-263    37-307 (738)
290 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.4E-41 1.6E-45  324.1  23.2  248    9-263     3-254 (256)
291 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.6E-41 1.4E-45  332.6  23.4  255    6-263    11-292 (304)
292 cd06616 PKc_MKK4 Catalytic dom 100.0 4.3E-41 9.3E-46  330.8  21.8  254   10-268     4-272 (288)
293 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-40 2.5E-45  327.7  24.5  254    8-268    17-275 (286)
294 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-41   7E-46  338.6  20.9  257   11-269     1-295 (330)
295 cd08226 PK_STRAD_beta Pseudoki 100.0   5E-41 1.1E-45  337.5  22.2  254   16-270     4-315 (328)
296 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.8E-41 2.1E-45  336.2  24.0  256    5-263     7-289 (334)
297 cd05111 PTK_HER3 Pseudokinase  100.0 1.2E-40 2.6E-45  326.9  24.0  252    8-263     5-264 (279)
298 cd05116 PTKc_Syk Catalytic dom 100.0 9.3E-41   2E-45  323.2  22.9  245   16-263     1-251 (257)
299 cd06635 STKc_TAO1 Catalytic do 100.0   2E-40 4.4E-45  331.5  26.0  256    9-271    24-285 (317)
300 cd07879 STKc_p38delta_MAPK13 C 100.0 7.3E-41 1.6E-45  338.5  22.9  254    8-269    13-303 (342)
301 cd05103 PTKc_VEGFR2 Catalytic  100.0 4.3E-41 9.4E-46  340.4  21.3  255    6-263     3-335 (343)
302 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-40 2.7E-45  364.3  26.4  149    9-157     3-152 (669)
303 KOG2345 Serine/threonine prote 100.0 1.9E-42 4.1E-47  318.2  10.1  253    8-263    19-296 (302)
304 cd05065 PTKc_EphR_B Catalytic  100.0 1.5E-40 3.4E-45  323.6  24.2  252    9-263     3-264 (269)
305 KOG0695 Serine/threonine prote 100.0 1.7E-41 3.6E-46  322.9  16.8  259    7-268   247-521 (593)
306 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-40 3.3E-45  322.3  24.1  248    7-262     3-255 (260)
307 cd05097 PTKc_DDR_like Catalyti 100.0 7.6E-41 1.6E-45  330.8  22.2  251    9-262     4-291 (295)
308 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-40 3.2E-45  322.1  23.8  249    6-262     2-255 (260)
309 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-40 6.1E-45  330.0  26.4  255    9-270    20-280 (313)
310 cd05066 PTKc_EphR_A Catalytic  100.0 1.5E-40 3.3E-45  323.5  23.5  251    9-262     3-261 (267)
311 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-40 2.6E-45  327.9  22.8  252    8-262     3-284 (288)
312 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-40 3.5E-45  328.6  23.7  252    8-262     3-292 (296)
313 cd05057 PTKc_EGFR_like Catalyt 100.0 2.7E-40 5.8E-45  323.9  25.0  251    8-262     5-263 (279)
314 cd05583 STKc_MSK_N N-terminal  100.0 1.9E-40   4E-45  326.5  23.5  257   11-268     1-271 (288)
315 cd05034 PTKc_Src_like Catalyti 100.0 3.1E-40 6.6E-45  319.7  24.5  249    7-262     3-256 (261)
316 cd05118 STKc_CMGC Catalytic do 100.0 6.6E-41 1.4E-45  327.7  20.0  251   12-266     1-283 (283)
317 PF07714 Pkinase_Tyr:  Protein  100.0 6.3E-41 1.4E-45  325.6  19.4  247   13-262     2-257 (259)
318 KOG0983 Mitogen-activated prot 100.0 8.9E-42 1.9E-46  317.4  12.4  253   11-270    93-356 (391)
319 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-40 7.3E-45  318.7  23.7  244    8-263     4-252 (256)
320 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.6E-40 3.5E-45  342.8  22.7  255    6-263    33-395 (401)
321 cd05082 PTKc_Csk Catalytic dom 100.0 3.7E-40 7.9E-45  318.7  23.8  243    7-262     3-251 (256)
322 KOG0193 Serine/threonine prote 100.0 1.2E-41 2.6E-46  345.8  13.8  253    5-262   387-648 (678)
323 cd05060 PTKc_Syk_like Catalyti 100.0 4.6E-40 9.9E-45  318.2  24.3  243   16-262     1-250 (257)
324 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.5E-40 1.2E-44  319.4  24.4  254    7-263     2-263 (268)
325 cd06634 STKc_TAO2 Catalytic do 100.0   3E-40 6.6E-45  328.9  22.9  255    8-269    13-273 (308)
326 KOG0662 Cyclin-dependent kinas 100.0 1.1E-41 2.5E-46  299.4  11.1  255   10-268     2-288 (292)
327 cd05115 PTKc_Zap-70 Catalytic  100.0 6.4E-40 1.4E-44  317.9  24.4  243   17-263     2-251 (257)
328 cd07838 STKc_CDK4_6_like Catal 100.0 4.3E-40 9.3E-45  322.6  23.3  249   12-266     1-287 (287)
329 cd07829 STKc_CDK_like Catalyti 100.0 1.7E-40 3.7E-45  324.6  20.3  251   12-266     1-282 (282)
330 cd07857 STKc_MPK1 Catalytic do 100.0 4.8E-40   1E-44  330.9  24.1  257   11-269     1-298 (332)
331 cd05043 PTK_Ryk Pseudokinase d 100.0 5.3E-40 1.1E-44  321.8  23.7  253    7-262     3-271 (280)
332 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-40 3.3E-45  321.8  19.6  252   11-266     1-260 (260)
333 cd05041 PTKc_Fes_like Catalyti 100.0 5.7E-40 1.2E-44  315.9  23.2  244   16-263     1-248 (251)
334 cd05047 PTKc_Tie Catalytic dom 100.0 6.2E-40 1.3E-44  320.0  23.6  242   16-263     1-264 (270)
335 cd05112 PTKc_Itk Catalytic dom 100.0 9.6E-40 2.1E-44  315.3  24.1  247   10-263     4-254 (256)
336 cd06618 PKc_MKK7 Catalytic dom 100.0 7.9E-40 1.7E-44  323.7  23.8  259    4-268     9-278 (296)
337 cd07830 STKc_MAK_like Catalyti 100.0 3.5E-40 7.6E-45  323.1  21.0  249   12-266     1-283 (283)
338 cd05040 PTKc_Ack_like Catalyti 100.0 8.2E-40 1.8E-44  315.9  23.3  243   16-262     1-253 (257)
339 KOG4721 Serine/threonine prote 100.0   2E-41 4.4E-46  340.4  12.3  241    7-263   121-364 (904)
340 cd08216 PK_STRAD Pseudokinase  100.0 3.2E-40   7E-45  328.8  20.9  247   22-270    12-302 (314)
341 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-39 3.5E-44  315.1  24.9  249    6-262     2-255 (260)
342 cd05046 PTK_CCK4 Pseudokinase  100.0 7.8E-40 1.7E-44  319.5  22.9  251    9-263     4-272 (275)
343 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.8E-40 3.9E-45  321.6  18.0  238   16-263     1-256 (258)
344 smart00219 TyrKc Tyrosine kina 100.0 1.2E-39 2.6E-44  313.9  23.6  247   12-262     1-256 (258)
345 KOG0584 Serine/threonine prote 100.0 4.9E-41 1.1E-45  343.3  14.3  254    9-269    38-302 (632)
346 cd05085 PTKc_Fer Catalytic dom 100.0   2E-39 4.3E-44  312.0  24.4  243   16-263     1-247 (250)
347 KOG1035 eIF-2alpha kinase GCN2 100.0 5.8E-41 1.3E-45  362.1  14.5  255    8-267   477-875 (1351)
348 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-39 4.1E-44  316.2  23.7  251    8-263     4-261 (270)
349 cd05576 STKc_RPK118_like Catal 100.0 4.1E-40   9E-45  315.6  18.3  228   21-266     4-237 (237)
350 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.5E-39 3.3E-44  316.3  22.1  238   16-263     1-260 (262)
351 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-39 3.6E-44  316.4  22.4  244   16-262     1-265 (269)
352 cd05044 PTKc_c-ros Catalytic d 100.0 1.6E-39 3.4E-44  316.1  21.2  244   16-262     1-265 (269)
353 cd05110 PTKc_HER4 Catalytic do 100.0 2.5E-39 5.5E-44  321.5  22.9  251    9-263     6-264 (303)
354 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.7E-39 5.8E-44  317.8  22.9  250   11-263     5-279 (284)
355 KOG0671 LAMMER dual specificit 100.0 5.4E-41 1.2E-45  325.2  10.4  254    4-268    83-411 (415)
356 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.7E-39 3.8E-44  318.1  21.0  237   17-263     2-272 (274)
357 KOG0194 Protein tyrosine kinas 100.0 7.1E-40 1.5E-44  335.3  18.5  252    7-262   154-415 (474)
358 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.1E-39 1.1E-43  315.4  23.7  251    9-263     3-279 (284)
359 cd05083 PTKc_Chk Catalytic dom 100.0 3.3E-39 7.2E-44  311.6  22.0  241    9-263     5-250 (254)
360 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.7E-39   1E-43  313.4  23.2  244   16-262     1-265 (269)
361 KOG0666 Cyclin C-dependent kin 100.0 5.3E-41 1.2E-45  317.0   8.9  262    9-272    23-346 (438)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 5.2E-39 1.1E-43  311.2  23.0  245   16-263     1-255 (262)
363 PHA02882 putative serine/threo 100.0 6.3E-39 1.4E-43  317.5  23.6  255    5-262     7-291 (294)
364 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.2E-39   9E-44  313.8  21.8  250   12-263     1-268 (273)
365 cd08528 STKc_Nek10 Catalytic d 100.0   8E-39 1.7E-43  311.3  23.2  249   11-263     1-266 (269)
366 KOG1187 Serine/threonine prote 100.0 5.5E-39 1.2E-43  325.3  20.8  246   10-262    75-347 (361)
367 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.7E-39 1.5E-43  309.4  20.4  235   16-262     1-256 (259)
368 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-38 2.5E-43  312.0  21.7  250   10-262     4-278 (284)
369 cd05086 PTKc_Aatyk2 Catalytic  100.0 3.2E-38 6.9E-43  307.7  22.6  244   16-262     1-264 (268)
370 KOG1026 Nerve growth factor re 100.0 4.6E-39 9.9E-44  339.5  15.9  250    9-261   485-756 (774)
371 KOG0669 Cyclin T-dependent kin 100.0 1.1E-40 2.3E-45  307.0   2.8  268    1-270     8-322 (376)
372 KOG1151 Tousled-like protein k 100.0   2E-39 4.4E-44  318.0  11.3  264    7-270   460-748 (775)
373 KOG4250 TANK binding protein k 100.0 4.1E-39 8.9E-44  332.9  13.1  241   10-255    13-296 (732)
374 PLN03225 Serine/threonine-prot 100.0   1E-37 2.2E-42  334.0  20.5  254    7-269   129-456 (566)
375 KOG0587 Traf2- and Nck-interac 100.0 1.1E-37 2.3E-42  327.9  18.7  254    9-269    18-288 (953)
376 KOG1095 Protein tyrosine kinas 100.0 3.2E-37   7E-42  336.1  21.8  251    9-262   691-956 (1025)
377 smart00220 S_TKc Serine/Threon 100.0 1.2E-36 2.5E-41  288.6  21.7  239   22-266     1-244 (244)
378 KOG0670 U4/U6-associated splic 100.0 1.6E-38 3.5E-43  316.9   8.4  255    4-268   426-751 (752)
379 KOG0668 Casein kinase II, alph 100.0 5.1E-38 1.1E-42  285.7   8.4  251    8-269    36-328 (338)
380 KOG1006 Mitogen-activated prot 100.0 3.3E-38 7.1E-43  292.6   5.5  252   12-270    66-334 (361)
381 PLN03224 probable serine/threo 100.0 1.4E-35 3.1E-40  311.0  23.1  261    7-268   142-505 (507)
382 KOG1290 Serine/threonine prote 100.0 3.9E-35 8.5E-40  291.5  17.9  134    4-142    71-221 (590)
383 KOG0199 ACK and related non-re 100.0 6.8E-36 1.5E-40  306.7  12.9  255    9-267   109-372 (1039)
384 KOG0665 Jun-N-terminal kinase  100.0 3.1E-36 6.7E-41  286.2   9.3  253    7-267    14-314 (369)
385 KOG1152 Signal transduction se 100.0 7.8E-36 1.7E-40  301.1  11.1  201   10-214   561-771 (772)
386 KOG4278 Protein tyrosine kinas 100.0 4.7E-35   1E-39  296.8  15.4  241   12-261   269-517 (1157)
387 PLN00113 leucine-rich repeat r 100.0 8.2E-35 1.8E-39  332.2  17.1  237   10-263   690-947 (968)
388 KOG1094 Discoidin domain recep 100.0 6.5E-35 1.4E-39  294.7  14.2  255    8-268   536-803 (807)
389 KOG0196 Tyrosine kinase, EPH ( 100.0 3.4E-35 7.3E-40  305.2  12.2  250   10-263   629-887 (996)
390 KOG0664 Nemo-like MAPK-related 100.0 3.6E-36 7.8E-41  279.8   4.1  257   12-271    55-351 (449)
391 KOG4257 Focal adhesion tyrosin 100.0 7.8E-35 1.7E-39  295.7  13.4  244   12-262   391-644 (974)
392 KOG0576 Mitogen-activated prot 100.0 4.9E-35 1.1E-39  299.7   8.9  255    9-269    14-277 (829)
393 KOG1027 Serine/threonine prote 100.0 8.7E-35 1.9E-39  304.8  10.1  244   14-269   513-773 (903)
394 KOG3653 Transforming growth fa 100.0 2.9E-34 6.2E-39  284.8  11.5  244   10-261   210-497 (534)
395 KOG2052 Activin A type IB rece 100.0 1.4E-33 3.1E-38  278.0  15.3  248    7-262   208-498 (513)
396 KOG1345 Serine/threonine kinas 100.0 3.8E-34 8.2E-39  266.3   9.7  255    7-270    21-294 (378)
397 KOG0200 Fibroblast/platelet-de 100.0 2.3E-32   5E-37  295.4  21.2  252    7-262   293-574 (609)
398 KOG1167 Serine/threonine prote 100.0 2.9E-33 6.3E-38  274.8  11.7  256    6-268    32-386 (418)
399 cd00180 PKc Catalytic domain o 100.0   2E-31 4.3E-36  246.1  20.9  212   18-264     1-215 (215)
400 KOG0984 Mitogen-activated prot 100.0 2.1E-32 4.5E-37  245.8  11.2  211   11-228    47-269 (282)
401 smart00221 STYKc Protein kinas 100.0 5.9E-31 1.3E-35  247.5  20.9  218   12-233     1-223 (225)
402 KOG1025 Epidermal growth facto 100.0 3.9E-32 8.5E-37  283.3  13.7  247   12-262   698-952 (1177)
403 KOG0590 Checkpoint kinase and  100.0 1.2E-31 2.6E-36  287.0   5.2  260    9-269   316-591 (601)
404 PLN00181 protein SPA1-RELATED; 100.0 1.3E-30 2.9E-35  291.2   9.3  199   66-268    28-270 (793)
405 COG0515 SPS1 Serine/threonine  100.0 3.7E-27 7.9E-32  230.3  24.0  255   12-269     2-281 (384)
406 PRK09188 serine/threonine prot 100.0 8.1E-28 1.8E-32  242.7  17.0  172    5-186    13-195 (365)
407 KOG1024 Receptor-like protein  100.0 3.2E-28   7E-33  236.5  12.4  253    7-262   281-550 (563)
408 smart00750 KIND kinase non-cat  99.9 3.8E-28 8.1E-33  221.5  10.3  158   95-268     1-170 (176)
409 KOG1164 Casein kinase (serine/  99.9 1.1E-26 2.3E-31  233.3  20.8  248   11-263    19-293 (322)
410 KOG0603 Ribosomal protein S6 k  99.9 9.4E-29   2E-33  254.3   4.2  238   17-268     1-248 (612)
411 KOG1163 Casein kinase (serine/  99.9 6.1E-27 1.3E-31  215.1  15.3  250    4-260     9-277 (341)
412 KOG1165 Casein kinase (serine/  99.9 1.8E-26   4E-31  220.5  16.3  247    7-260    25-292 (449)
413 PRK10359 lipopolysaccharide co  99.9 5.3E-25 1.2E-29  207.8  12.5  176    6-206    27-216 (232)
414 cd05147 RIO1_euk RIO kinase fa  99.9 3.2E-24   7E-29  198.9  13.7  142   15-160     2-168 (190)
415 KOG0606 Microtubule-associated  99.9 1.1E-24 2.3E-29  234.2   9.8  220    8-268    81-320 (1205)
416 KOG0590 Checkpoint kinase and   99.9 3.9E-25 8.4E-30  237.0   6.1  259    9-268    19-291 (601)
417 cd05145 RIO1_like RIO kinase f  99.9 2.2E-23 4.7E-28  193.5  15.0  143   14-160     1-168 (190)
418 PF14531 Kinase-like:  Kinase-l  99.9 1.5E-23 3.2E-28  203.7  10.0  234   11-254    13-288 (288)
419 PRK12274 serine/threonine prot  99.9   7E-23 1.5E-27  189.8  13.0  192   12-215     4-210 (218)
420 PRK10345 hypothetical protein;  99.9 7.4E-22 1.6E-26  185.4  14.3  132   15-154     7-154 (210)
421 KOG4158 BRPK/PTEN-induced prot  99.9 1.7E-22 3.6E-27  197.4   7.8  250    8-258   155-505 (598)
422 KOG1240 Protein kinase contain  99.9 2.7E-23 5.8E-28  223.7   2.2  248   11-263    24-291 (1431)
423 smart00090 RIO RIO-like kinase  99.8 8.6E-21 1.9E-25  182.0  13.7  143   12-159    30-198 (237)
424 KOG0195 Integrin-linked kinase  99.8 1.1E-21 2.5E-26  183.2   5.7  242    8-261   188-440 (448)
425 KOG1166 Mitotic checkpoint ser  99.8 1.7E-20 3.7E-25  205.6  11.7  236    9-260   697-946 (974)
426 PRK14879 serine/threonine prot  99.8 1.6E-19 3.4E-24  169.8  15.6  137   16-158     2-143 (211)
427 cd05144 RIO2_C RIO kinase fami  99.8   2E-19 4.4E-24  167.8  11.4  139   12-160    17-176 (198)
428 TIGR03724 arch_bud32 Kae1-asso  99.8 6.1E-19 1.3E-23  164.3  12.3  133   17-158     1-138 (199)
429 PRK09605 bifunctional UGMP fam  99.8 1.9E-18   4E-23  185.2  14.2  140   10-159   333-477 (535)
430 cd05119 RIO RIO kinase family,  99.8 2.4E-18 5.2E-23  158.6  11.5  139   14-159     1-164 (187)
431 KOG1033 eIF-2alpha kinase PEK/  99.8 2.2E-19 4.8E-24  182.2   2.5  248    9-266   243-515 (516)
432 PF03822 NAF:  NAF domain;  Int  99.7 7.8E-19 1.7E-23  129.6   4.3   60  310-369     1-63  (63)
433 PRK01723 3-deoxy-D-manno-octul  99.7 1.7E-17 3.7E-22  159.4  13.8  137   16-158    37-191 (239)
434 KOG1023 Natriuretic peptide re  99.7 1.1E-17 2.3E-22  172.6  11.4  199   64-262     1-219 (484)
435 cd05120 APH_ChoK_like Aminogly  99.7 1.8E-16   4E-21  139.0  12.8  132   14-158     2-138 (155)
436 KOG0606 Microtubule-associated  99.7 2.1E-17 4.6E-22  178.6   2.6  261    8-269   802-1098(1205)
437 KOG0601 Cyclin-dependent kinas  99.6 3.5E-16 7.6E-21  161.7   5.0  257    7-268   111-384 (524)
438 TIGR01982 UbiB 2-polyprenylphe  99.6 1.2E-14 2.5E-19  151.5  10.9  141   16-160   123-308 (437)
439 PRK04750 ubiB putative ubiquin  99.5 2.8E-15 6.1E-20  158.3   4.3  144    9-160   119-315 (537)
440 cd05146 RIO3_euk RIO kinase fa  99.5   4E-13 8.7E-18  124.4  13.4  141   15-160     2-175 (197)
441 cd05151 ChoK Choline Kinase (C  99.5 2.4E-13 5.2E-18  122.9  11.1  127   15-157     3-135 (170)
442 KOG1243 Protein kinase [Genera  99.5 6.5E-13 1.4E-17  138.9  13.7  171   28-210    30-201 (690)
443 KOG0601 Cyclin-dependent kinas  99.4 6.9E-14 1.5E-18  144.8   5.1  253    5-267   260-518 (524)
444 KOG1266 Protein kinase [Signal  99.3 1.2E-12 2.6E-17  126.2   5.5  201   64-268   121-336 (458)
445 cd05154 ACAD10_11_like Acyl-Co  99.3 2.5E-11 5.4E-16  114.3  13.0  139   16-157     4-205 (223)
446 COG3642 Mn2+-dependent serine/  99.3 6.3E-11 1.4E-15  106.8  11.9  134   16-158     2-140 (204)
447 KOG3087 Serine/threonine prote  99.2   2E-10 4.3E-15  103.2  12.1  144   14-159    11-166 (229)
448 KOG3741 Poly(A) ribonuclease s  99.2 4.8E-10   1E-14  114.4  14.2  210   23-263   289-521 (655)
449 PF01163 RIO1:  RIO1 family;  I  99.1 2.8E-10 6.1E-15  104.9  10.7  128   25-159     1-156 (188)
450 KOG2137 Protein kinase [Signal  99.1 4.5E-11 9.8E-16  125.8   4.2  153  117-270   107-272 (700)
451 PRK15123 lipopolysaccharide co  99.0 4.1E-09 8.8E-14  102.8  14.5  131   25-157    37-193 (268)
452 COG0478 RIO-like serine/threon  99.0 2.7E-09 5.8E-14  101.7  11.3  137   12-157    93-250 (304)
453 COG4248 Uncharacterized protei  98.8 4.5E-08 9.9E-13   98.0  13.7  232   13-259    14-292 (637)
454 PF06293 Kdo:  Lipopolysacchari  98.8 8.5E-08 1.9E-12   90.1  13.3  104   55-158    56-170 (206)
455 PF06176 WaaY:  Lipopolysacchar  98.8 1.3E-07 2.8E-12   88.5  14.1  141    7-157    28-182 (229)
456 PRK09902 hypothetical protein;  98.7   2E-07 4.2E-12   87.0  12.7  137   19-157    27-178 (216)
457 COG1718 RIO1 Serine/threonine   98.6 9.8E-07 2.1E-11   83.6  13.8  138   17-160    55-217 (268)
458 TIGR02172 Fb_sc_TIGR02172 Fibr  98.6 8.4E-07 1.8E-11   84.6  13.2  132   16-157     7-181 (226)
459 PF01636 APH:  Phosphotransfera  98.6 8.5E-07 1.8E-11   83.7  12.9  136   15-157     2-196 (239)
460 COG0661 AarF Predicted unusual  98.5 4.7E-07   1E-11   95.7  11.4  143   16-161   131-317 (517)
461 KOG0576 Mitogen-activated prot  98.4 5.1E-08 1.1E-12  102.1   0.4  237   12-268   244-489 (829)
462 cd05150 APH Aminoglycoside 3'-  98.3   6E-06 1.3E-10   79.3  11.8   74   17-98      5-80  (244)
463 PLN02876 acyl-CoA dehydrogenas  98.3 1.1E-05 2.5E-10   91.0  15.4   82   14-97     42-131 (822)
464 PF10707 YrbL-PhoP_reg:  PhoP r  98.2 2.1E-05 4.6E-10   73.2  13.5  130   16-152     7-165 (199)
465 KOG1035 eIF-2alpha kinase GCN2  98.2 5.8E-06 1.2E-10   92.3  10.1  202   56-269   228-440 (1351)
466 COG2112 Predicted Ser/Thr prot  98.2 1.2E-05 2.6E-10   72.5   9.6  129   13-158    25-155 (201)
467 PF13095 FTA2:  Kinetochore Sim  98.2 3.7E-05 8.1E-10   71.3  13.1  128   10-156    37-206 (207)
468 cd05155 APH_ChoK_like_1 Unchar  98.1 2.8E-05   6E-10   74.4  10.6   73   16-98      3-82  (235)
469 KOG1235 Predicted unusual prot  98.1 2.3E-05 5.1E-10   82.8  10.8  141   16-161   167-357 (538)
470 PF12260 PIP49_C:  Protein-kina  97.9 5.5E-05 1.2E-09   70.0   9.3   99   58-160     7-113 (188)
471 PRK10593 hypothetical protein;  97.8 0.00041 8.9E-09   68.9  14.8   78   13-97     17-100 (297)
472 PRK09550 mtnK methylthioribose  97.8  0.0003 6.4E-09   72.5  13.9   79   15-95     31-116 (401)
473 cd05157 ETNK_euk Ethanolamine   97.8 0.00021 4.6E-09   68.1  11.8   75   15-97      3-79  (235)
474 KOG1826 Ras GTPase activating   97.8 8.5E-07 1.8E-11  100.5  -5.7  208   58-268  1277-1497(2724)
475 TIGR02721 ycfN_thiK thiamine k  97.8 0.00015 3.2E-09   70.3  10.2  131   17-157     3-174 (256)
476 cd05153 HomoserineK_II Homoser  97.8 0.00026 5.7E-09   69.9  12.2  135   15-157    19-204 (296)
477 KOG2268 Serine/threonine prote  97.8 2.6E-05 5.6E-10   76.6   4.7  134   12-155    94-248 (465)
478 PF02149 KA1:  Kinase associate  97.8 6.3E-05 1.4E-09   52.7   5.4   42  386-428     3-45  (47)
479 TIGR00938 thrB_alt homoserine   97.7 0.00042 9.2E-09   69.1  12.0  136   15-157    27-216 (307)
480 COG3173 Predicted aminoglycosi  97.6 0.00068 1.5E-08   67.5  12.1  139   13-159    28-229 (321)
481 cd05156 ChoK_euk Choline Kinas  97.5   0.001 2.2E-08   66.0  11.5   75   15-97      3-84  (302)
482 PRK05231 homoserine kinase; Pr  97.5  0.0025 5.5E-08   63.7  14.4  135   15-157    27-216 (319)
483 PLN02756 S-methyl-5-thioribose  97.3   0.003 6.5E-08   65.0  12.8   77   14-94     36-119 (418)
484 KOG2270 Serine/threonine prote  97.2  0.0035 7.7E-08   62.9  11.0  141   14-158   148-313 (520)
485 cd05152 MPH2' Macrolide 2'-Pho  97.1  0.0061 1.3E-07   59.9  12.2   30  129-158   186-216 (276)
486 KOG1093 Predicted protein kina  97.1  0.0012 2.6E-08   68.7   7.0  163   55-271    27-202 (725)
487 TIGR01767 MTRK 5-methylthiorib  97.1  0.0037 8.1E-08   63.3  10.3   77   17-95      2-85  (370)
488 TIGR02906 spore_CotS spore coa  96.8   0.014   3E-07   57.9  12.2   29  128-157   187-215 (313)
489 PRK12396 5-methylribose kinase  96.8  0.0057 1.2E-07   62.7   8.8   79   15-95     34-118 (409)
490 PLN02236 choline kinase         96.7   0.014   3E-07   59.2  11.5  136   14-157    40-230 (344)
491 PLN02421 phosphotransferase, a  96.4   0.034 7.3E-07   56.1  11.6  135   15-157    19-212 (330)
492 PF03881 Fructosamin_kin:  Fruc  96.2   0.063 1.4E-06   53.0  12.3   75   13-95     20-97  (288)
493 PF01633 Choline_kinase:  Choli  96.2   0.015 3.3E-07   54.5   7.4   29  129-157   144-173 (211)
494 COG5072 ALK1 Serine/threonine   96.1   0.024 5.2E-07   57.0   8.2   86   69-159   284-371 (488)
495 TIGR02904 spore_ysxE spore coa  96.0    0.12 2.5E-06   51.6  13.1   29  129-157   197-225 (309)
496 COG2334 Putative homoserine ki  95.9   0.093   2E-06   52.8  11.7  133   17-157    33-227 (331)
497 PRK11768 serine/threonine prot  95.6    0.34 7.3E-06   48.7  14.6   71   21-96     36-113 (325)
498 PF07387 Seadorna_VP7:  Seadorn  95.4   0.058 1.3E-06   50.8   7.6   84   55-154   103-188 (308)
499 PTZ00384 choline kinase; Provi  95.2    0.12 2.6E-06   53.2  10.1   76   14-97     54-136 (383)
500 PRK06148 hypothetical protein;  94.6    0.28   6E-06   57.0  12.0  135   16-157    31-235 (1013)

No 1  
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-62  Score=499.49  Aligned_cols=340  Identities=53%  Similarity=0.893  Sum_probs=278.5

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc--hhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeC
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK--VGMIDQIKREISVMRLVR-HPNVVELYEVMASK   82 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~   82 (472)
                      ....++|++++.||+|+||+|++|.+..+|+.||+|+++++....  ....+.+.+|+.++++++ ||||+++++++.+.
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~   92 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP   92 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence            367889999999999999999999999999999999888764331  135678889999999999 99999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC-CCEEEeeccchhhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH-GNLKVSDFGLSALAE  160 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~-g~vkl~DFGla~~~~  160 (472)
                      +++|+||||+.||+|++++.. +++.|.+++++|+||++|++|||++||+||||||||||+|.+ +++||+|||++....
T Consensus        93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            999999999999999999977 899999999999999999999999999999999999999999 999999999999774


Q ss_pred             cccCCCccccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCC-CHH
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWF-APE  238 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-s~~  238 (472)
                        ..+..+.+.||||.|+|||++.+.+ |.+.++|||||||+||.|++|+.||++.+...++.+|.++.+.+|.++ |++
T Consensus       173 --~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~  250 (370)
T KOG0583|consen  173 --GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPE  250 (370)
T ss_pred             --CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHH
Confidence              3456689999999999999999998 999999999999999999999999999999999999999999999999 999


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCccccc-CCCCCCCCcccccc-c--CCCCCCcccCCCC--CCccccccccccCCCC
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSWFRK-GLVKPSISETEEKE-W--APVDADAVFSPSG--STSTVAESKNELAKPC  312 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~f~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  312 (472)
                      +++||++||.+||.+|+|+.+|++||||+. .............. .  .+...+.......  .......... ...+.
T Consensus       251 ~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  329 (370)
T KOG0583|consen  251 ARSLIEKMLVPDPSTRITLLEILEHPWFQKENPLPSDELPSEVAPSAPSAPSAKDSVSPVETEDEKPLSPTSTP-ESLPL  329 (370)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhhChhhccCCCCCccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence            999999999999999999999999999998 43322111000000 0  0000000000000  0000000000 00356


Q ss_pred             CCCchhhhc-cCCCC--CCCCchhhhhhcccceeeccCC
Q 012021          313 NLNAFDIIS-FSAGF--DLSGLFEEREKRKEVRFTSNKP  348 (472)
Q Consensus       313 ~~~~f~~~~-~s~~~--~ls~l~~~~~~~~~~rf~~~~~  348 (472)
                      .++++++++ ++.+.  +++++++....++..+|.+..+
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (370)
T KOG0583|consen  330 SLNAYDLGSSLSTGINEALSGLFENEKEKEEPRFASLTS  368 (370)
T ss_pred             ccChhhhcccccccccccccccccccccchhhhhhhccc
Confidence            788888887 88888  8999987654456677776654


No 2  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=6.5e-61  Score=487.92  Aligned_cols=263  Identities=37%  Similarity=0.716  Sum_probs=248.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|..++.||+|||++||.+++..+|+.||+|++.+....+....+.+.+||+|++.|+|||||+++++|++.+++|+|+|
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE   98 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE   98 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence            79999999999999999999999999999999999988888889999999999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           91 YVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        91 ~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      +|..++|..++++ +.++|.+++.+++||+.||.|||++||+|||||..||||+++-++||+|||||+.......  .-.
T Consensus        99 LC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E--rk~  176 (592)
T KOG0575|consen   99 LCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE--RKK  176 (592)
T ss_pred             ecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--ccc
Confidence            9999999999875 6899999999999999999999999999999999999999999999999999998775432  246


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~  249 (472)
                      +.||||.|+|||++.+.++. ..+||||+||+||.||.|++||...+..+.|.+|...++.+|..+|.++++||.+||++
T Consensus       177 TlCGTPNYIAPEVl~k~gHs-fEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  177 TLCGTPNYIAPEVLNKSGHS-FEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRP  255 (592)
T ss_pred             eecCCCcccChhHhccCCCC-CchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcC
Confidence            88999999999999988875 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCChhhhhcCcccccCCCCCCCC
Q 012021          250 NPNTRISMTKIMENSWFRKGLVKPSIS  276 (472)
Q Consensus       250 dP~~Rpt~~eil~h~~f~~~~~~~~~~  276 (472)
                      ||.+|||+++||.|+||+.+..+...+
T Consensus       256 ~P~~Rpsl~~vL~h~Ff~~g~~p~~lp  282 (592)
T KOG0575|consen  256 NPSERPSLDEVLDHPFFKSGFTPARLP  282 (592)
T ss_pred             CcccCCCHHHHhcCHhhhCCCcCCCCC
Confidence            999999999999999998877654443


No 3  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.7e-61  Score=471.02  Aligned_cols=259  Identities=39%  Similarity=0.733  Sum_probs=232.5

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchh----hHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVG----MIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~----~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      +.+.|.+.+.||+|+||.|.+|.++.||+.||||++++.+.....    ....+.+|++||+.|+|||||+++++|+..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            567899999999999999999999999999999999988765422    2345789999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC---CCEEEeeccchhhh
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH---GNLKVSDFGLSALA  159 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~---g~vkl~DFGla~~~  159 (472)
                      ..|+||||+.||+|++++.. +.+.|+..+.+++||+.|+.|||++||+||||||+|||+..+   ..+||+|||+|+..
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS  329 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence            99999999999999999865 789999999999999999999999999999999999999766   67999999999987


Q ss_pred             hcccCCCccccccCCCcccChhhhcccCCC--CCcccchhhhHHHHHHhcCCCCCCCCcHHH-HHHHHhccCCCCC--CC
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRRGYD--GSKADIWSCGVILYVLLAGYLPFHDSNLME-MYRKIGKAEFKFP--NW  234 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwSlGvil~~lltG~~Pf~~~~~~~-~~~~i~~~~~~~~--~~  234 (472)
                      .   ....+.+.||||.|+|||++...++.  ..+.|+|||||+||.+++|++||.+..... ++++|.++.+.+-  .|
T Consensus       330 g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w  406 (475)
T KOG0615|consen  330 G---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW  406 (475)
T ss_pred             c---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence            5   34567899999999999999877643  457899999999999999999998866554 8899999987764  34


Q ss_pred             --CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          235 --FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       235 --~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                        ++.++.+||.+||..||+.|||++|+|+||||+..
T Consensus       407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence              79999999999999999999999999999999853


No 4  
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.6e-60  Score=485.12  Aligned_cols=259  Identities=44%  Similarity=0.838  Sum_probs=245.5

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .|-|+++++||.|+-|.|.+|++..||+.+|||++.+...........+.+||.||+.+.|||++++|++++++.++|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            56899999999999999999999999999999999888544445567799999999999999999999999999999999


Q ss_pred             EEecCCCcccchhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVA-KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~-~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      .||++||+||+++. +|+++|.++.++|+||+.|+.|||..+|+||||||+|+|||..+++||+|||+|.+-.   .+..
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~---~gkl  167 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV---PGKL  167 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc---CCcc
Confidence            99999999999985 5899999999999999999999999999999999999999999999999999998643   4567


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhccc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L  247 (472)
                      +.+.||+|.|.|||++.+.+|+|.++||||||||||.||||++||++.+...++.++.++.+.+|..+++++++||++||
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml  247 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRML  247 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +.||.+|+|++||++|||+....
T Consensus       248 ~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  248 DVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             ccCccccccHHHHhhCchhhcCC
Confidence            99999999999999999998654


No 5  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=6.2e-58  Score=442.98  Aligned_cols=259  Identities=36%  Similarity=0.715  Sum_probs=241.0

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +-.+.|++++.||+|+||+||.++.+.|++.+|+|+++|..+.+....+..+.|..||..++||.||+++..|++.+++|
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            44678999999999999999999999999999999999999888778899999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +|+||+.||+|+..+.+ +.++|..++.|+..|+.||.|||++||+||||||||||||.+|+++|+||||++......  
T Consensus       102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~--  179 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG--  179 (357)
T ss_pred             EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC--
Confidence            99999999999999975 899999999999999999999999999999999999999999999999999998654322  


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHh
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLS  244 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~  244 (472)
                      ....+.|||+.|||||++.+.+|+ ..+|.||||+++|+|++|.+||.+.+...++++|.++.. ..|..++++++++|+
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~-~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~  258 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYD-KAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLK  258 (357)
T ss_pred             CccccccCCccccChHHHhcCCCC-cccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHH
Confidence            235678999999999999999987 889999999999999999999999999999999999994 445559999999999


Q ss_pred             cccCCCCCCcC----ChhhhhcCccccc
Q 012021          245 KILDPNPNTRI----SMTKIMENSWFRK  268 (472)
Q Consensus       245 ~~L~~dP~~Rp----t~~eil~h~~f~~  268 (472)
                      ++|..||.+|.    ++.+|.+||||..
T Consensus       259 ~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  259 KLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             HHhccCHHHhcCCCCChHHhhcCccccc
Confidence            99999999996    6889999999985


No 6  
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00  E-value=7.1e-58  Score=429.28  Aligned_cols=256  Identities=40%  Similarity=0.786  Sum_probs=244.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      .-.++|+++++||.|+||+|.+++++.+|..+|+|++++..+.+....+...+|..+|+.+.||.++++++.+.+.+++|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            55678999999999999999999999999999999999999988888999999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +||||++||+|+.++++ ++++|..++.|+.||+.||+|||+++|++|||||||||||.+|.+||+|||+|.....    
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~----  196 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG----  196 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC----
Confidence            99999999999999987 8999999999999999999999999999999999999999999999999999986543    


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~  245 (472)
                       ...+.||||.|+|||++..++|. .++|.|||||++|||++|++||.+.+...+|++|..++..+|..+++++++||++
T Consensus       197 -rT~TlCGTPeYLAPEii~sk~yn-kavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~  274 (355)
T KOG0616|consen  197 -RTWTLCGTPEYLAPEIIQSKGYN-KAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKK  274 (355)
T ss_pred             -cEEEecCCccccChHHhhcCCCC-cchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHH
Confidence             25788999999999999999986 8999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcC-----ChhhhhcCccccc
Q 012021          246 ILDPNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       246 ~L~~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      +|+.|-.+|.     ...+|.+||||+.
T Consensus       275 LL~vD~t~R~gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  275 LLQVDLTKRFGNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             HHhhhhHhhhcCcCCCccccccCccccc
Confidence            9999999994     5779999999985


No 7  
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-57  Score=454.84  Aligned_cols=260  Identities=34%  Similarity=0.700  Sum_probs=242.5

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~   86 (472)
                      -..+|.+++.||+|+|++|++|+++.+++.||||+++|+.+.++...+.+.+|-.+|.+| +||.|++||..|.++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            345899999999999999999999999999999999999998888889999999999999 7999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +|+||+++|+|.++|.+ |.|+|..++.|+.||++||+|||++|||||||||||||||.||+++|+|||.|+.+......
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            99999999999999987 89999999999999999999999999999999999999999999999999999876532211


Q ss_pred             -----------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCC
Q 012021          166 -----------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNW  234 (472)
Q Consensus       166 -----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~  234 (472)
                                 ..-.+.+||..|++||++.... .++.+|||+||||||.|++|.+||.+.+...++++|....+.+|+.
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~  309 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEG  309 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCC
Confidence                       1114578999999999997664 4689999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +++.+++||+++|..||++|+|+++|.+||||..
T Consensus       310 fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  310 FPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             CCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence            9999999999999999999999999999999986


No 8  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=3.4e-55  Score=424.11  Aligned_cols=257  Identities=31%  Similarity=0.548  Sum_probs=232.9

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-EE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-KI   85 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~~   85 (472)
                      +..+..+.+..||+|+.|+||+++++.|++.+|+|++...  .+....+++.+|++|++..+||+||++|+.|..+. .+
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI  153 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence            3445778899999999999999999999999999999433  23466789999999999999999999999999999 59


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      +++||||+||+|.+.+.. |+++|....+++.++++||.|||+ ++|+||||||+|||++..|.+||||||.+...... 
T Consensus       154 sI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             EeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence            999999999999998876 899999999999999999999995 99999999999999999999999999999876543 


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC-----cHHHHHHHHhcc-CCCCCCC-CC
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS-----NLMEMYRKIGKA-EFKFPNW-FA  236 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~-----~~~~~~~~i~~~-~~~~~~~-~s  236 (472)
                         ...+.+||..|||||.+.+..|. .++||||||++++|+++|+.||...     +..+++..|..+ .+.+|.. +|
T Consensus       233 ---~a~tfvGT~~YMsPERi~g~~Ys-~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS  308 (364)
T KOG0581|consen  233 ---IANTFVGTSAYMSPERISGESYS-VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFS  308 (364)
T ss_pred             ---hcccccccccccChhhhcCCcCC-cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCC
Confidence               45788999999999999988876 8899999999999999999999874     677888888885 4667876 99


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +++++||..||++||.+|||+.|+++|||+++..
T Consensus       309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  309 PEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            9999999999999999999999999999998744


No 9  
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=2.8e-54  Score=421.04  Aligned_cols=259  Identities=38%  Similarity=0.679  Sum_probs=235.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      -..++|.+.+.||+|+||+||+|+++.++..||||.+.+.+.. ....+.+..||.||+.++|||||++++++.+++.+|
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            4567899999999999999999999999999999999988753 356788999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC------CCEEEeeccchhhh
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH------GNLKVSDFGLSALA  159 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~------g~vkl~DFGla~~~  159 (472)
                      +|||||+||+|.+++.+ +.++|..++.+++||+.||++||+++|+||||||+||||+.+      -.+||+|||+|+..
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            99999999999999976 699999999999999999999999999999999999999865      35899999999987


Q ss_pred             hcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---CCCCCCC
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---KFPNWFA  236 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~s  236 (472)
                      ..   .....+.||+|.|||||++....|+ .|+|+||+|+|+|++++|+.||+..+..+++..+.++..   .++.+++
T Consensus       166 ~~---~~~a~tlcGSplYMAPEV~~~~~Yd-AKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s  241 (429)
T KOG0595|consen  166 QP---GSMAETLCGSPLYMAPEVIMSQQYD-AKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELS  241 (429)
T ss_pred             Cc---hhHHHHhhCCccccCHHHHHhcccc-chhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhcc
Confidence            63   3456889999999999999888887 799999999999999999999999999999888877653   3456688


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +...+|+...|..+|..|.+..+-+.|+++....
T Consensus       242 ~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  242 NPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             CchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            8889999999999999999999999999987643


No 10 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=5.3e-54  Score=424.57  Aligned_cols=269  Identities=36%  Similarity=0.657  Sum_probs=238.3

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch-----------hhHHHHHHHHHHHHhcCCCCe
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV-----------GMIDQIKREISVMRLVRHPNV   72 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-----------~~~~~~~~Ei~il~~l~hpnI   72 (472)
                      .+....+.|++++.||+|.||+|.+|++..+++.||||++++......           .-.+.+.+||.||+++.||||
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV  170 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV  170 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence            355678899999999999999999999999999999999987543321           124689999999999999999


Q ss_pred             eeEEEEEEeC--CEEEEEEEecCCCcccchhccCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           73 VELYEVMASK--TKIYFVMEYVKGGELFGKVAKGK-LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        73 v~l~~~~~~~--~~~~lV~E~~~gg~L~~~i~~~~-l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      |+|+++..+.  +++|||+|||..|.+...-..+. +++.+++.|+++++.||+|||.+||+||||||.|+||+++|.+|
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence            9999999764  68999999999998865555566 99999999999999999999999999999999999999999999


Q ss_pred             Eeeccchhhhhcc---cCCCccccccCCCcccChhhhcc---cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHH
Q 012021          150 VSDFGLSALAESK---HQDGLLHTTCGTPAYVAPEVINR---RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRK  223 (472)
Q Consensus       150 l~DFGla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~  223 (472)
                      |+|||.+..+...   ..+..+....|||.|+|||.+.+   ..+.+.+.||||+||+||.|+.|++||.+....+++.+
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K  330 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK  330 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence            9999998866332   22234566899999999999977   55778999999999999999999999999999999999


Q ss_pred             HhccCCCCCCC--CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCCC
Q 012021          224 IGKAEFKFPNW--FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLVK  272 (472)
Q Consensus       224 i~~~~~~~~~~--~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~~  272 (472)
                      |......+|..  +.+++++||.+||++||.+|+++.+|..|||.......
T Consensus       331 Ivn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~  381 (576)
T KOG0585|consen  331 IVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDS  381 (576)
T ss_pred             HhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCC
Confidence            99999988876  78999999999999999999999999999999876543


No 11 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00  E-value=4.8e-54  Score=431.55  Aligned_cols=260  Identities=37%  Similarity=0.690  Sum_probs=234.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +-.+.|++++.||+|+||.||+|+.+.||+.+|+|+++|+.....+.++.++.|-+||....+|.||+||..|.+..++|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            34678999999999999999999999999999999999988777788899999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc---
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK---  162 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~---  162 (472)
                      |||||++||++..++.+ +.|+|+.++.|+.+++.|++.+|+.|+|||||||+|+|||..|++||+||||+.-....   
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~  297 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI  297 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence            99999999999998865 89999999999999999999999999999999999999999999999999998633210   


Q ss_pred             -----------------cCCC-------------------------ccccccCCCcccChhhhcccCCCCCcccchhhhH
Q 012021          163 -----------------HQDG-------------------------LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGV  200 (472)
Q Consensus       163 -----------------~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGv  200 (472)
                                       ..+.                         .....+|||.|+|||++.+.+|. ..+|+|||||
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~-~~cDwWSLG~  376 (550)
T KOG0605|consen  298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYG-KECDWWSLGC  376 (550)
T ss_pred             hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCC-ccccHHHHHH
Confidence                             0000                         11234699999999999999986 8999999999


Q ss_pred             HHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCCC--CCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          201 ILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPNW--FAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       201 il~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~--~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      |+||||.|++||...++.+.+++|....  +.+|..  +++++++||.+||. ||.+|..   ++||.+||||+.
T Consensus       377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~  450 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG  450 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence            9999999999999999999999998765  555544  78999999999999 9999985   899999999986


No 12 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=7.6e-55  Score=422.42  Aligned_cols=264  Identities=41%  Similarity=0.754  Sum_probs=248.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      -+..||++.++||.|+||+|.+|.+...|+.||||.|.++++.....+-.+++||+||..|+||||+.+|++|++.+++.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            35679999999999999999999999999999999999999988888889999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +||||..+|+|++++.. +.|+|.+++++|+||++|+.|||.++++|||||.+|||||.|+++||+||||+.++..   .
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~---~  206 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD---K  206 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc---c
Confidence            99999999999999975 7999999999999999999999999999999999999999999999999999988754   4


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~  245 (472)
                      ..+.++||+|.|.+||++.+.+|.++..|-|||||+||.|+.|..||++.+...+.++|.++.+.-|. -+.++.-||+.
T Consensus       207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-~PSdA~gLIRw  285 (668)
T KOG0611|consen  207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-TPSDASGLIRW  285 (668)
T ss_pred             cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-CCchHHHHHHH
Confidence            56899999999999999999999999999999999999999999999999999999999999988776 56678999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccCCCCCC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKGLVKPS  274 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~~~~~~  274 (472)
                      ||-.||.+|.|+.+|-.|=|..=++.-+.
T Consensus       286 mLmVNP~RRATieDiAsHWWvNwgy~~~V  314 (668)
T KOG0611|consen  286 MLMVNPERRATIEDIASHWWVNWGYNMPV  314 (668)
T ss_pred             HHhcCcccchhHHHHhhhheeeccccccc
Confidence            99999999999999999988877665443


No 13 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.8e-53  Score=435.62  Aligned_cols=261  Identities=33%  Similarity=0.641  Sum_probs=245.9

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKT   83 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~   83 (472)
                      +.+-.+.|.+++.||+|+||+|++|..+.+++.+|||+++|..+.....++..+.|.+|+...+ ||.+++++.+|.+++
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE  442 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence            3566789999999999999999999999999999999999999988888999999999998885 999999999999999


Q ss_pred             EEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           84 KIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++|+||||+.||++..++..+.++|..++.|+..++.||.|||++||||||||.+|||||.+|.+||+|||+++....  
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~--  520 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG--  520 (694)
T ss_pred             eEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC--
Confidence            999999999999988888889999999999999999999999999999999999999999999999999999985442  


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLL  243 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li  243 (472)
                      .+....|.||||.|+|||++.+..|. .+.|.|||||+||+||.|..||.+.+..+++..|...++.+|.|+|.++.+++
T Consensus       521 ~g~~TsTfCGTpey~aPEil~e~~Yt-~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il  599 (694)
T KOG0694|consen  521 QGDRTSTFCGTPEFLAPEVLTEQSYT-RAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIM  599 (694)
T ss_pred             CCCccccccCChhhcChhhhccCccc-chhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHH
Confidence            33457899999999999999998886 89999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCcCCh-----hhhhcCccccc
Q 012021          244 SKILDPNPNTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~-----~eil~h~~f~~  268 (472)
                      +++|..||++|..+     .+|..||||+.
T Consensus       600 ~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  600 RRLLRKNPEKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             HHHhccCcccccCCCCCCchhhhhCCcccc
Confidence            99999999999975     68999999986


No 14 
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-54  Score=396.48  Aligned_cols=260  Identities=36%  Similarity=0.738  Sum_probs=235.3

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ...+.+.|++-+.||+|.|+.||.+.+..||+.+|+|+++..+... ...+.+.+|+.|-+.|+||||++|++.+.+.+.
T Consensus         6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~   84 (355)
T KOG0033|consen    6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESF   84 (355)
T ss_pred             ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcCCCcEeehhhhhcccce
Confidence            4567789999999999999999999999999999999998776544 356889999999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC---CCEEEeeccchhhhh
Q 012021           85 IYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH---GNLKVSDFGLSALAE  160 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~---g~vkl~DFGla~~~~  160 (472)
                      .|+|+|++.|++|+.-|.. --++|..+-.+++||+++|.|||.+||+|||+||+|+||-..   .-+||+|||+|....
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence            9999999999999776654 578999999999999999999999999999999999999543   359999999998766


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCC--C--CC
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPN--W--FA  236 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~--~s  236 (472)
                      .   ........|||.|||||++...+|. ..+|||++|||||-|+.|++||.+.+...+|+.|..+.+.+|.  |  ++
T Consensus       165 ~---g~~~~G~~GtP~fmaPEvvrkdpy~-kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is  240 (355)
T KOG0033|consen  165 D---GEAWHGFAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT  240 (355)
T ss_pred             C---ccccccccCCCcccCHHHhhcCCCC-CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC
Confidence            2   2335677899999999999888875 7899999999999999999999999999999999999887765  3  89


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      +++++||++||..||.+|+|+.|.|+|||+.+.
T Consensus       241 ~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  241 PEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             HHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence            999999999999999999999999999999863


No 15 
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=6.1e-54  Score=399.98  Aligned_cols=248  Identities=32%  Similarity=0.595  Sum_probs=223.1

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEE-EEEeCC-
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYE-VMASKT-   83 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~-~~~~~~-   83 (472)
                      ..-...|+|++.||+|+||+||++.+..+|..||.|.+.-... +....+.+..|+.+|++|+|||||++++ .+..++ 
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            3445569999999999999999999999999999999985543 3456678899999999999999999999 454444 


Q ss_pred             EEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCcEEEcCCCCEEEeecc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHS--RG--VCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~--~g--iiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                      .+++|||||.+|+|...|+.     ..++|..+|+++.||+.||..||+  ..  |+||||||.||+|+.+|.+||+|||
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG  173 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG  173 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence            49999999999999998853     469999999999999999999999  45  9999999999999999999999999


Q ss_pred             chhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-CC-
Q 012021          155 LSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-FP-  232 (472)
Q Consensus       155 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-~~-  232 (472)
                      |++.+.....  ..++.+|||.||+||++...+|+ +++||||+||++|||+.-..||.+.+...+..+|..++++ +| 
T Consensus       174 L~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~-~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~  250 (375)
T KOG0591|consen  174 LGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYN-FKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD  250 (375)
T ss_pred             hHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCC-cchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH
Confidence            9998876543  35778999999999999999997 9999999999999999999999999999999999999876 67 


Q ss_pred             CCCCHHHHHHHhcccCCCCCCcCCh
Q 012021          233 NWFAPEVRRLLSKILDPNPNTRISM  257 (472)
Q Consensus       233 ~~~s~~l~~li~~~L~~dP~~Rpt~  257 (472)
                      ..+|.++..+|..|+..||..||+.
T Consensus       251 ~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  251 EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHhhhHHHHHHHHHccCCcccCCCc
Confidence            5689999999999999999999997


No 16 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.7e-52  Score=413.00  Aligned_cols=263  Identities=31%  Similarity=0.525  Sum_probs=230.9

Q ss_pred             CcCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEe
Q 012021            3 NKGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMAS   81 (472)
Q Consensus         3 ~~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~   81 (472)
                      ..-.++++||.++++||.|+||.||+|....+|+.||||.+.+.... .+..-.+ ||+..|++|+ ||||++|.+++.+
T Consensus         3 ~~~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nL-REvksL~kln~hpniikL~Evi~d   80 (538)
T KOG0661|consen    3 LTQVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNL-REVKSLRKLNPHPNIIKLKEVIRD   80 (538)
T ss_pred             ceehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHH-HHHHHHHhcCCCCcchhhHHHhhc
Confidence            44567899999999999999999999999999999999999765533 3333333 8999999999 9999999999987


Q ss_pred             CC-EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           82 KT-KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        82 ~~-~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      .+ .+|+||||++ .+|+++++.  ..|+|..++.|+.||+.||+|+|.+|++|||+||||||+..+..+||+|||||+.
T Consensus        81 ~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARe  159 (538)
T KOG0661|consen   81 NDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLARE  159 (538)
T ss_pred             cCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccc
Confidence            77 9999999995 589999965  4799999999999999999999999999999999999999999999999999998


Q ss_pred             hhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc------------
Q 012021          159 AESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK------------  226 (472)
Q Consensus       159 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~------------  226 (472)
                      ..+...   .+..+.|.+|+|||++...++++.+.|+||+|||++|+.+-++.|.+.+..+...+|..            
T Consensus       160 v~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e  236 (538)
T KOG0661|consen  160 VRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE  236 (538)
T ss_pred             cccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence            776543   57789999999999999999999999999999999999999999999988877777642            


Q ss_pred             -------cCCCCCC-----------CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          227 -------AEFKFPN-----------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       227 -------~~~~~~~-----------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                             -++.+|.           ..++++.++|.+||.+||.+|||+.|+++||||+....
T Consensus       237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA  299 (538)
T ss_pred             HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence                   1233332           25789999999999999999999999999999997654


No 17 
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.4e-52  Score=383.22  Aligned_cols=259  Identities=38%  Similarity=0.722  Sum_probs=243.6

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      .+.-.++|++++.||.|-||.||+|+.+.++-.||+|++.++.+...+...++.+|++|...|+||||+++|++|.+...
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r   96 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR   96 (281)
T ss_pred             cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce
Confidence            34567899999999999999999999999999999999999988887888899999999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           85 IYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      +|+++||...|+|+..+..   .+++|..+..|+.|++.|+.|||.++|+||||||+|+|++.+|.+||+|||-+.....
T Consensus        97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~  176 (281)
T KOG0580|consen   97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  176 (281)
T ss_pred             eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence            9999999999999999973   4699999999999999999999999999999999999999999999999998876542


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHH
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRR  241 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~  241 (472)
                          +.-.+.|||..|.+||...+.+++ ...|+|++|++.||++.|.+||...+..+.|++|.+..+.+|..++.++++
T Consensus       177 ----~kR~tlcgt~dyl~pEmv~~~~hd-~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~d  251 (281)
T KOG0580|consen  177 ----NKRKTLCGTLDYLPPEMVEGRGHD-KFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAAD  251 (281)
T ss_pred             ----CCceeeecccccCCHhhcCCCCcc-chhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHH
Confidence                223688999999999999999887 789999999999999999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCccccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +|.+||..+|.+|.+..|+++|||+..
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHHHHhccCccccccHHHHhhhHHHHh
Confidence            999999999999999999999999975


No 18 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.4e-51  Score=404.15  Aligned_cols=259  Identities=32%  Similarity=0.608  Sum_probs=222.9

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--EEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT--KIYF   87 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~l   87 (472)
                      .+|..++.||+|+||.||++.+..+|+..|||.+......   ..+.+.+|+.+|+.++|||||+++|......  .+++
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP---TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch---hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            4689999999999999999999999999999999776322   2677999999999999999999999854444  7999


Q ss_pred             EEEecCCCcccchhcc-C-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccchhhhhc-cc
Q 012021           88 VMEYVKGGELFGKVAK-G-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLSALAES-KH  163 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla~~~~~-~~  163 (472)
                      +|||++||+|.+++.+ + +++|..++++.+||+.||.|||++||+||||||+|||++. ++.+||+|||++..... ..
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            9999999999999986 4 6999999999999999999999999999999999999999 79999999999887663 11


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-CcHHHHHHHHhccC--CCCCCCCCHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-SNLMEMYRKIGKAE--FKFPNWFAPEVR  240 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-~~~~~~~~~i~~~~--~~~~~~~s~~l~  240 (472)
                      .........|||.|||||++........++|||||||++.||+||..||.. .......-.+....  +.+|.++|++++
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~  253 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAK  253 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHH
Confidence            112234578999999999998633344589999999999999999999987 44444444554443  678999999999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          241 RLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      +||.+||..||++|||++++|+|||.+....
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            9999999999999999999999999987543


No 19 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00  E-value=3e-52  Score=392.11  Aligned_cols=256  Identities=29%  Similarity=0.472  Sum_probs=219.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      |++|+.+.++|+|+||.||+++++.||+.||||.+-.+. .+....+-..|||.+|++++|||+|.++++|..+.++++|
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV   79 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV   79 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence            578999999999999999999999999999999986543 2233445678999999999999999999999999999999


Q ss_pred             EEecCCCcccchhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVA-KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~-~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +|||+..-|..+-+ .+++++..++.|++|++.|+.|||+++++|||||||||||+.+|.+||||||+|+.....  ...
T Consensus        80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--gd~  157 (396)
T KOG0593|consen   80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--GDN  157 (396)
T ss_pred             eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC--cch
Confidence            99997754443333 267999999999999999999999999999999999999999999999999999987642  234


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-------------------
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-------------------  228 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-------------------  228 (472)
                      .+..+.|.+|+|||.+.+...++.+.||||+||++.||++|.+.|++.+..+....|.+.-                   
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G  237 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG  237 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence            6778899999999999987667899999999999999999999999987766655553210                   


Q ss_pred             CCCC------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          229 FKFP------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       229 ~~~~------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      ..+|            +.++.-+.+|+.+||..||.+|++.++++.||+|.
T Consensus       238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence            0111            12456788999999999999999999999999994


No 20 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00  E-value=4.1e-52  Score=417.60  Aligned_cols=257  Identities=33%  Similarity=0.628  Sum_probs=240.7

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +++|.+.+.||+|+||.||+|+.+.+.+.||+|.++|..... .....+.+|++|++.++|||||.++++|++..++++|
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-KELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-HHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence            578999999999999999999999999999999999876543 5678899999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +||+.| +|+.++.. +.++|+.++.++.+++.||.|||+++|+|||+||.|||++.+|.+|+||||+|+....+  ...
T Consensus        80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--t~v  156 (808)
T KOG0597|consen   80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--TSV  156 (808)
T ss_pred             ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC--cee
Confidence            999987 99999976 78999999999999999999999999999999999999999999999999999977653  234


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhccc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L  247 (472)
                      +....|||.|||||++.+..|+ ..+|+||||||+||+++|++||...+...+...|.......|...+..+.+|+..+|
T Consensus       157 ltsikGtPlYmAPElv~e~pyd-~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL  235 (808)
T KOG0597|consen  157 LTSIKGTPLYMAPELVEEQPYD-HTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLL  235 (808)
T ss_pred             eeeccCcccccCHHHHcCCCcc-chhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHh
Confidence            6677899999999999988887 889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      .+||.+|.|-.+++.|||.+...
T Consensus       236 ~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  236 IKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             hcChhhcccHHHHhcChHHhhhh
Confidence            99999999999999999998644


No 21 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00  E-value=1.4e-50  Score=407.38  Aligned_cols=256  Identities=37%  Similarity=0.750  Sum_probs=233.9

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+++.+|
T Consensus        15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY   94 (329)
T ss_pred             CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence            34678999999999999999999999999999999998765444455677899999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +||||+.|++|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......   
T Consensus        95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---  171 (329)
T PTZ00263         95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR---  171 (329)
T ss_pred             EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC---
Confidence            99999999999998865 67999999999999999999999999999999999999999999999999998755321   


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~  245 (472)
                        ..+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+..+...+|.++++.+++||.+
T Consensus       172 --~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  248 (329)
T PTZ00263        172 --TFTLCGTPEYLAPEVIQSKGHG-KAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKG  248 (329)
T ss_pred             --cceecCChhhcCHHHHcCCCCC-CcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHH
Confidence              2356899999999999877764 8999999999999999999999998888889999989999999999999999999


Q ss_pred             ccCCCCCCcCC-----hhhhhcCccccc
Q 012021          246 ILDPNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       246 ~L~~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      ||+.||.+|++     ++++++||||+.
T Consensus       249 ~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        249 LLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            99999999997     799999999976


No 22 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=2.4e-50  Score=398.47  Aligned_cols=253  Identities=32%  Similarity=0.670  Sum_probs=230.6

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            47999999999999999999999999999999997654433344567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+.+++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......     .
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~  155 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----T  155 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----c
Confidence            99999999999865 67999999999999999999999999999999999999999999999999998765321     2


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+||+.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+......+|..+++.+++||++||+
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~  234 (291)
T cd05612         156 WTLCGTPEYLAPEVIQSKGHN-KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLV  234 (291)
T ss_pred             ccccCChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcC
Confidence            346799999999999877764 8999999999999999999999999888889999988899999999999999999999


Q ss_pred             CCCCCcCC-----hhhhhcCccccc
Q 012021          249 PNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      .||.+|++     ++++++||||+.
T Consensus       235 ~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         235 VDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             CCHHHccCCccCCHHHHhcCccccC
Confidence            99999995     999999999975


No 23 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=5.5e-50  Score=406.73  Aligned_cols=259  Identities=39%  Similarity=0.741  Sum_probs=236.6

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKI   85 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~   85 (472)
                      -+..+|++++.||+|.||.||.++++.||+.+|+|++.+.........+.+.+|+.||+++. |||||.++++|++.+.+
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            34568999999999999999999999999999999999887765555678999999999998 99999999999999999


Q ss_pred             EEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC----CCEEEeeccchhhhhc
Q 012021           86 YFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH----GNLKVSDFGLSALAES  161 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~----g~vkl~DFGla~~~~~  161 (472)
                      |+|||++.||+|++.+....++|..+..+++|++.++.|||+.||+||||||+|+|+...    +.+|++|||+|.....
T Consensus       112 ~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            999999999999999976569999999999999999999999999999999999999543    4799999999987765


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC--CC--CCH
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP--NW--FAP  237 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~--~~--~s~  237 (472)
                         ....++.||||.|+|||++...+|. ..+||||+|+++|.|++|..||.+.+....+.++..+.+.++  .|  ++.
T Consensus       192 ---~~~~~~~~Gtp~y~APEvl~~~~y~-~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~  267 (382)
T KOG0032|consen  192 ---GERLHTIVGTPEYVAPEVLGGRPYG-DEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE  267 (382)
T ss_pred             ---CceEeeecCCccccCchhhcCCCCC-cccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence               3457889999999999999877775 899999999999999999999999999888889999887654  33  789


Q ss_pred             HHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          238 EVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       238 ~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .++++|++||..||.+|+|+.++|+|||++..
T Consensus       268 ~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  268 SAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            99999999999999999999999999998753


No 24 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=1.1e-49  Score=399.66  Aligned_cols=250  Identities=38%  Similarity=0.677  Sum_probs=225.3

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+.|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999999999999999998765444445567789999999999999999999999999999999999999


Q ss_pred             cccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           96 ELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        96 ~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      +|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......  .......+||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt  158 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcccceecC
Confidence            99988865 67999999999999999999999999999999999999999999999999998743221  1223456899


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCc
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTR  254 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~R  254 (472)
                      +.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+......+|..+++++.+||.+||..||++|
T Consensus       159 ~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         159 PEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             ccccChhhhcCCCCC-ccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHc
Confidence            999999999877765 8999999999999999999999998888888888888888999999999999999999999999


Q ss_pred             C-----ChhhhhcCccccc
Q 012021          255 I-----SMTKIMENSWFRK  268 (472)
Q Consensus       255 p-----t~~eil~h~~f~~  268 (472)
                      |     ++.++++||||+.
T Consensus       238 ~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         238 LGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCC
Confidence            9     8999999999976


No 25 
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=5.3e-51  Score=405.27  Aligned_cols=261  Identities=41%  Similarity=0.736  Sum_probs=242.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      +.|=|.+.+.||+|-|+.|.+|++.-||+.||||++++.+... -....+.+|+.-|+.++|||||+||++..+.+++|+
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            4556999999999999999999999999999999999988654 334678899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE-cCCCCEEEeeccchhhhhcccC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL-DEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl-d~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+|+-.+|+|+++|.+  ..+.|+.+++||.||+.|+.|||+..++||||||+|+.+ ..-|-+||.|||++..+...  
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--  172 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--  172 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--
Confidence            9999999999999965  579999999999999999999999999999999999865 56789999999998876543  


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~  244 (472)
                       ..+.+.||+..|.|||++.+..|+.++.||||||||||-|++|++||...+..+....|....+..|..++.+.++||.
T Consensus       173 -~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~  251 (864)
T KOG4717|consen  173 -KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQ  251 (864)
T ss_pred             -chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHH
Confidence             3478999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCcCChhhhhcCcccccCCCC
Q 012021          245 KILDPNPNTRISMTKIMENSWFRKGLVK  272 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f~~~~~~  272 (472)
                      .||..||++|.+.++|..++|++.+...
T Consensus       252 sMLvRdPkkRAslEeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  252 SMLVRDPKKRASLEEIVSTSWLQAGDRG  279 (864)
T ss_pred             HHHhcCchhhccHHHHhccccccCCCCC
Confidence            9999999999999999999999976543


No 26 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=4.7e-50  Score=399.62  Aligned_cols=258  Identities=33%  Similarity=0.551  Sum_probs=227.0

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKI   85 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~   85 (472)
                      ..+.|+.+++||+|+||.||+|++..+|+.||+|.+..+.. +.+......|||.||++|+||||++|.+...+.  ..+
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            35679999999999999999999999999999999987653 345667788999999999999999999998776  789


Q ss_pred             EEEEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+|+||++. +|.-++...  +|++.+++.|+.||+.||+|||++||+|||||..|||||.+|++||+|||||+++....
T Consensus       194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            999999965 788888774  79999999999999999999999999999999999999999999999999999876644


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc----------CCCCC-
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA----------EFKFP-  232 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~----------~~~~~-  232 (472)
                      . ..++..+-|.+|+|||.+.+...++.+.|+||+||||.||++|++.|.+.+..+...+|.+.          ...+| 
T Consensus       273 ~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~  351 (560)
T KOG0600|consen  273 S-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH  351 (560)
T ss_pred             C-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence            3 33667788999999999999887789999999999999999999999999988888777431          01111 


Q ss_pred             ------------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 ------------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 ------------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                        ..+++.+.+|+..||..||.+|.|+.++|+++||..
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                              125778999999999999999999999999999954


No 27 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00  E-value=2.1e-49  Score=400.93  Aligned_cols=258  Identities=31%  Similarity=0.621  Sum_probs=232.9

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCC-cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTG-MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g-~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ..+-.++|++.+.||+|+||.||+|.+..++ ..||+|.+.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            4456778999999999999999999976654 789999997765444455677889999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ..|+||||+.||+|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~-  183 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT-  183 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence            99999999999999999865 6799999999999999999999999999999999999999999999999999875432 


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRL  242 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~l  242 (472)
                          ...+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+..+...+|..+++++.++
T Consensus       184 ----~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  258 (340)
T PTZ00426        184 ----RTYTLCGTPEYIAPEILLNVGHG-KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHL  258 (340)
T ss_pred             ----CcceecCChhhcCHHHHhCCCCC-ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence                12456899999999999876664 8999999999999999999999999888889999998888999999999999


Q ss_pred             HhcccCCCCCCcC-----ChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      |++||+.||.+|+     |++++++||||..
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            9999999999996     8999999999975


No 28 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=8e-50  Score=389.96  Aligned_cols=264  Identities=32%  Similarity=0.537  Sum_probs=236.8

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      +.+-.+.|++++.||.|.-|+||+|+.+.++..+|+|+++++.........++..|..||+.++||.++.||..|+++..
T Consensus        72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~  151 (459)
T KOG0610|consen   72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY  151 (459)
T ss_pred             CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence            45566789999999999999999999999999999999999988776777889999999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           85 IYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      .|++||||+||+|..+.++   +.+++..++.|+..++.||+|||..|||+||||||||||-++|+|.|+||.|+.....
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~  231 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV  231 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence            9999999999999888765   4699999999999999999999999999999999999999999999999998753210


Q ss_pred             ---------------------------------ccCC---------------------CccccccCCCcccChhhhcccC
Q 012021          162 ---------------------------------KHQD---------------------GLLHTTCGTPAYVAPEVINRRG  187 (472)
Q Consensus       162 ---------------------------------~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~  187 (472)
                                                       ....                     ......+||-.|+|||++.+.+
T Consensus       232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G  311 (459)
T KOG0610|consen  232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG  311 (459)
T ss_pred             CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence                                             0000                     0112346999999999999999


Q ss_pred             CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCC--CCHHHHHHHhcccCCCCCCcCC----hhhhh
Q 012021          188 YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNW--FAPEVRRLLSKILDPNPNTRIS----MTKIM  261 (472)
Q Consensus       188 ~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~s~~l~~li~~~L~~dP~~Rpt----~~eil  261 (472)
                      .. .++|.|+|||++||||.|..||.+.+..+.+.+|......+|..  ++..+++||+++|.+||++|..    +.||.
T Consensus       312 Hg-sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  312 HG-SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             CC-chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence            85 89999999999999999999999999999999999988888764  6789999999999999999998    99999


Q ss_pred             cCcccccC
Q 012021          262 ENSWFRKG  269 (472)
Q Consensus       262 ~h~~f~~~  269 (472)
                      +||||+..
T Consensus       391 ~HpFF~gV  398 (459)
T KOG0610|consen  391 RHPFFEGV  398 (459)
T ss_pred             cCccccCC
Confidence            99999863


No 29 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00  E-value=6.5e-49  Score=392.20  Aligned_cols=249  Identities=36%  Similarity=0.642  Sum_probs=224.2

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999999999999999999765544444566788999999999999999999999999999999999999999


Q ss_pred             cchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCc
Q 012021           98 FGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPA  176 (472)
Q Consensus        98 ~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~  176 (472)
                      .+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  ......+||+.
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~  158 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPE  158 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--CccccccCCcc
Confidence            998865 689999999999999999999999999999999999999999999999999987543221  22345689999


Q ss_pred             ccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcC-
Q 012021          177 YVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRI-  255 (472)
Q Consensus       177 y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rp-  255 (472)
                      |+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+......+|..+++++.++|.+||..||.+|| 
T Consensus       159 y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~  237 (312)
T cd05585         159 YLAPELLLGHGYT-KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLG  237 (312)
T ss_pred             cCCHHHHcCCCCC-CccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCC
Confidence            9999999887765 78999999999999999999999998888889998888899999999999999999999999997 


Q ss_pred             --ChhhhhcCcccccC
Q 012021          256 --SMTKIMENSWFRKG  269 (472)
Q Consensus       256 --t~~eil~h~~f~~~  269 (472)
                        ++.+++.||||.+.
T Consensus       238 ~~~~~e~l~hp~~~~~  253 (312)
T cd05585         238 YNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCHHHHHcCCCcCCC
Confidence              57899999999863


No 30 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=100.00  E-value=1.6e-48  Score=391.41  Aligned_cols=254  Identities=31%  Similarity=0.580  Sum_probs=227.0

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHH---hcCCCCeeeEEEEEEeCCEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMR---LVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~---~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      |++++.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.++.   .++||||+++++++.+.+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            789999999999999999999999999999998765443445567778877664   56799999999999999999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |||+.|++|...+..+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  ....
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~  158 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--GDRT  158 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC--CCcc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998643221  1223


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+......+|..+++++.++|.+||.
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~  237 (324)
T cd05589         159 STFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLR  237 (324)
T ss_pred             cccccCccccCHhHhcCCCCC-cccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhh
Confidence            456899999999999877664 7899999999999999999999998888888888888888899999999999999999


Q ss_pred             CCCCCcC-----ChhhhhcCccccc
Q 012021          249 PNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      .||.+||     ++.++++||||+.
T Consensus       238 ~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         238 RNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             cCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            9999999     6899999999976


No 31 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=2e-48  Score=391.68  Aligned_cols=250  Identities=37%  Similarity=0.674  Sum_probs=224.7

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999999999999999998765444455667889999999999999999999999999999999999999


Q ss_pred             cccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           96 ELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        96 ~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+||
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt  158 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKTFCGT  158 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccccccccCC
Confidence            99988865 57999999999999999999999999999999999999999999999999998753221  1223456899


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCc
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTR  254 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~R  254 (472)
                      +.|+|||++.+..+. .++|||||||++|+|++|..||...+.......+......+|..+++++.+||++||..||.+|
T Consensus       159 ~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R  237 (328)
T cd05593         159 PEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKR  237 (328)
T ss_pred             cCccChhhhcCCCCC-ccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHc
Confidence            999999999877664 8999999999999999999999988888888888888888999999999999999999999999


Q ss_pred             C-----ChhhhhcCccccc
Q 012021          255 I-----SMTKIMENSWFRK  268 (472)
Q Consensus       255 p-----t~~eil~h~~f~~  268 (472)
                      +     ++.++++||||..
T Consensus       238 ~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         238 LGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             CCCCCCCHHHHhcCCCcCC
Confidence            7     8999999999975


No 32 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-49  Score=402.95  Aligned_cols=254  Identities=31%  Similarity=0.567  Sum_probs=229.5

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ..+|...+.||+|+-|.||.|+...+++.||||.++.....+   .+.+.+|+.+|+..+|+|||++++.|--++.+|+|
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV  348 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV  348 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence            347999999999999999999999999999999999877543   46789999999999999999999999888999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |||++||+|.+.+....++|.++..+.++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+......  -
T Consensus       349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K--R  426 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK--R  426 (550)
T ss_pred             EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCc--c
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877654432  3


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh-cc--CCCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG-KA--EFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~-~~--~~~~~~~~s~~l~~li~~  245 (472)
                      .+.+|||+|||||+...+.|. ++.||||||++++||+-|++||-..++......|. .+  .+..|..+|+++++|+.+
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG-~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~  505 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDR  505 (550)
T ss_pred             ccccCCCCccchhhhhhcccC-ccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence            577899999999999988885 99999999999999999999998766654444443 33  456678899999999999


Q ss_pred             ccCCCCCCcCChhhhhcCccccc
Q 012021          246 ILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ||+.||.+|+++.|+|+||||+.
T Consensus       506 cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  506 CLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HhhcchhcCCCHHHHhcChhhhh
Confidence            99999999999999999999964


No 33 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=9.1e-49  Score=385.32  Aligned_cols=262  Identities=32%  Similarity=0.541  Sum_probs=229.8

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+-.+.|++...||.|.-+.||+|+.+.+++.||||+++.++...  .++.+.+|+..|+.++||||++++..|..+..+
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L   99 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL   99 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence            345678999999999999999999999999999999999988654  378999999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |+||.|+.+|++.+++..   ..++|..+..++++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+......
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            999999999999999975   57999999999999999999999999999999999999999999999999987755443


Q ss_pred             cCCC--ccccccCCCcccChhhhc--ccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC------
Q 012021          163 HQDG--LLHTTCGTPAYVAPEVIN--RRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP------  232 (472)
Q Consensus       163 ~~~~--~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~------  232 (472)
                      ....  .+.+..|||+|||||++.  ..||+ .|+||||||++..||.+|..||....++.+.-.-.++.++.+      
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd-fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYD-FKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCcc-chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence            3211  126679999999999953  35776 899999999999999999999999888876655445544322      


Q ss_pred             ----CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          233 ----NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       233 ----~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                          ..++..++.+|..||+.||.+|||+++++.|+||++..
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence                12567899999999999999999999999999999753


No 34 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=1.7e-48  Score=391.27  Aligned_cols=250  Identities=37%  Similarity=0.682  Sum_probs=224.2

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||++++..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            47999999999999999999999999998765443345567788999999999999999999999999999999999999


Q ss_pred             cccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           96 ELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        96 ~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      +|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt  158 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCccccccCC
Confidence            99888865 57999999999999999999999999999999999999999999999999998753221  1223456799


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCc
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTR  254 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~R  254 (472)
                      +.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+......+|..+++++.++|.+||..||.+|
T Consensus       159 ~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05595         159 PEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             cCcCCcccccCCCCC-chhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHh
Confidence            999999999777664 8999999999999999999999998888888888888888999999999999999999999999


Q ss_pred             C-----ChhhhhcCccccc
Q 012021          255 I-----SMTKIMENSWFRK  268 (472)
Q Consensus       255 p-----t~~eil~h~~f~~  268 (472)
                      +     ++.++++||||..
T Consensus       238 ~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         238 LGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCC
Confidence            8     8999999999975


No 35 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00  E-value=2.2e-50  Score=374.57  Aligned_cols=257  Identities=37%  Similarity=0.724  Sum_probs=229.8

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEe
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL-----KVGMIDQIKREISVMRLV-RHPNVVELYEVMAS   81 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~   81 (472)
                      ..++|+-.+.||.|..+.|..+.++.+|..+|+|+++.....     ...+.+.-.+|+.||+++ .||+|+++.+++++
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            456788999999999999999999999999999999643221     123456677899999987 59999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           82 KTKIYFVMEYVKGGELFGKVAKG-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                      +...++|+|.++.|+|+|++... .++|.+++++++||++|++|||.++|+||||||+|||+|+|-++||+|||+|+...
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence            99999999999999999999874 79999999999999999999999999999999999999999999999999999776


Q ss_pred             cccCCCccccccCCCcccChhhhcc------cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCC--C
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINR------RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKF--P  232 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~--~  232 (472)
                      ...   .+...||||+|.|||.+..      .+| +...|+||||||+|.|+.|.+||.....+-+.+.|..+++.+  |
T Consensus       175 ~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGY-s~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp  250 (411)
T KOG0599|consen  175 PGE---KLRELCGTPGYLAPETIKCSMYENHPGY-SKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP  250 (411)
T ss_pred             Cch---hHHHhcCCCcccChhheeeecccCCCCc-cchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc
Confidence            433   3677899999999999843      344 367999999999999999999999999999999999988765  5


Q ss_pred             CC--CCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 NW--FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 ~~--~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .|  +|.+.++||++||+.||.+|+|++|+|+||||.+
T Consensus       251 eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  251 EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            66  7899999999999999999999999999999965


No 36 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=1.8e-48  Score=397.38  Aligned_cols=257  Identities=32%  Similarity=0.587  Sum_probs=222.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47999999999999999999999999999999998765444455678899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ----  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~----  164 (472)
                      ||++||+|.+++.+ +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........    
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            99999999999865 6899999999999999999999999999999999999999999999999999875432100    


Q ss_pred             -----------------------------CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC
Q 012021          165 -----------------------------DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS  215 (472)
Q Consensus       165 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~  215 (472)
                                                   .......+||+.|+|||++.+.+++ .++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC-CchhhhhhHHHHHHHHhCCCCCCCC
Confidence                                         0012346899999999999887775 7999999999999999999999998


Q ss_pred             cHHHHHHHHhcc--CCCCCCC--CCHHHHHHHhcccCCCCC---CcCChhhhhcCccccc
Q 012021          216 NLMEMYRKIGKA--EFKFPNW--FAPEVRRLLSKILDPNPN---TRISMTKIMENSWFRK  268 (472)
Q Consensus       216 ~~~~~~~~i~~~--~~~~~~~--~s~~l~~li~~~L~~dP~---~Rpt~~eil~h~~f~~  268 (472)
                      +..+.+.++...  ...+|+.  ++++++++|.+|+. +|.   .||+++||++||||+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~  298 (363)
T cd05628         240 TPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG  298 (363)
T ss_pred             CHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence            888888887653  3445543  78999999999765 344   5689999999999975


No 37 
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=1.7e-49  Score=404.81  Aligned_cols=261  Identities=43%  Similarity=0.790  Sum_probs=245.1

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      .-.+.|.+.++||.|.|++|.+|++..++..||||++++...... ....+.+|+.+|+.++|||||+++.+.++...+|
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            456789999999999999999999999999999999999876543 3345899999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +||||+.+|++++++.+ +++.+..++.+|.|+++|++|||+++|+|||||++||||+.+-++||+|||++..+..   .
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~---~  208 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY---G  208 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc---c
Confidence            99999999999999976 7899999999999999999999999999999999999999999999999999998764   3


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~  245 (472)
                      ..+.+.||++.|.|||++.+..|+++.+|+||+|+++|.|+.|.+||++.+..++..+...+.+.+|-.++.+..++|++
T Consensus       209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk  288 (596)
T KOG0586|consen  209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRK  288 (596)
T ss_pred             ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccCCC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      +|.++|.+|+++++|+.|.|....+.
T Consensus       289 ~lvl~Pskr~~~dqim~~~W~n~~~~  314 (596)
T KOG0586|consen  289 FLVLNPSKRGPCDQIMKDRWRNDLLE  314 (596)
T ss_pred             hhccCccccCCHHHhhhhcccchhhh
Confidence            99999999999999999999976543


No 38 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00  E-value=8e-49  Score=363.43  Aligned_cols=255  Identities=32%  Similarity=0.504  Sum_probs=223.8

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .||...+.||+|+||.||+|++..||+.||||.+...... .+......|||..|+.++|+||+.++++|...+.+.+|+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-DGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-cCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            5899999999999999999999999999999999877543 244556779999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||++. +|...|+.  ..++...++.|+.+++.||+|||++.|+||||||+|+|++++|.+||+|||+|+.+......  
T Consensus        81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~--  157 (318)
T KOG0659|consen   81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI--  157 (318)
T ss_pred             Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc--
Confidence            99954 89888876  46999999999999999999999999999999999999999999999999999988765443  


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-----CCC----------
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-----KFP----------  232 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-----~~~----------  232 (472)
                      ....+-|.+|+|||.+.+...++...|+||.|||+.||+-|.+-|.+.+..+....|-+.-.     .+|          
T Consensus       158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~  237 (318)
T KOG0659|consen  158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK  237 (318)
T ss_pred             cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence            23347899999999999888778999999999999999999999999888777766643100     011          


Q ss_pred             -------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 -------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 -------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                   +..++++.+|+.+||..||.+|+|+.|+++|+||+.
T Consensus       238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                         114678899999999999999999999999999986


No 39 
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=8.5e-50  Score=378.25  Aligned_cols=262  Identities=36%  Similarity=0.663  Sum_probs=242.7

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      +..+-++.|+.++.||+|+||+|-+++.+.+|+.+|||+++++.+.....+..-..|-.+|+..+||.+..|...|.+.+
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD  241 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence            34578999999999999999999999999999999999999998776666667778999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ++|+||||+.||+|+-.+.+ ..++|+.++.|...|+.||.|||+++|++||||.+|+|||.+|++||+||||++.-.. 
T Consensus       242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-  320 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-  320 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc-
Confidence            99999999999999988866 6799999999999999999999999999999999999999999999999999875332 


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRL  242 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~l  242 (472)
                       ......+.||||.|.|||++....|. .+.|.|.+||++|||+||++||...+...++..|......+|..++++++.|
T Consensus       321 -~g~t~kTFCGTPEYLAPEVleDnDYg-raVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktL  398 (516)
T KOG0690|consen  321 -YGDTTKTFCGTPEYLAPEVLEDNDYG-RAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTL  398 (516)
T ss_pred             -ccceeccccCChhhcCchhhcccccc-ceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHH
Confidence             22346789999999999999888875 8999999999999999999999999999999999999999999999999999


Q ss_pred             HhcccCCCCCCcC-----ChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      +..+|..||++|.     .+.||++|+||..
T Consensus       399 LsGLL~kdP~kRLGgGpdDakEi~~h~FF~~  429 (516)
T KOG0690|consen  399 LSGLLKKDPKKRLGGGPDDAKEIMRHRFFAS  429 (516)
T ss_pred             HHHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence            9999999999998     4789999999975


No 40 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=100.00  E-value=3e-48  Score=390.82  Aligned_cols=253  Identities=32%  Similarity=0.580  Sum_probs=224.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999998765444445677889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||++|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....     ..
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~  155 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YA  155 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----cc
Confidence            99999999999965 6799999999999999999999999999999999999999999999999999875533     23


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCC------CCCHHHH
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPN------WFAPEVR  240 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~------~~s~~l~  240 (472)
                      ...+||+.|+|||++.+..+. .++|||||||++|+|++|..||...+..+.+..+....  ...|.      .+++++.
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~  234 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGKGYD-FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW  234 (333)
T ss_pred             CCcccCccccChhHhcCCCCC-CccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence            456899999999999877665 89999999999999999999999888877776665422  22232      3589999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          241 RLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ++|.+||..+|.+||++.++++||||..
T Consensus       235 ~li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         235 DLITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             HHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence            9999999999999999999999999985


No 41 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00  E-value=5.4e-48  Score=395.43  Aligned_cols=257  Identities=33%  Similarity=0.584  Sum_probs=220.1

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.+.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999997655433344577889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc-----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH-----  163 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~-----  163 (472)
                      ||++||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+....     
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            99999999999865 678999999999999999999999999999999999999999999999999975321100     


Q ss_pred             ------------------------------------CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc
Q 012021          164 ------------------------------------QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA  207 (472)
Q Consensus       164 ------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt  207 (472)
                                                          ........+||+.|+|||++.+..+. .++|||||||++|+|++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilyell~  239 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLV  239 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC-cceeeeeccceeeehhh
Confidence                                                00011235799999999999887765 89999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHhcc--CCCCCC--CCCHHHHHHHhcccCCCCCCcC---ChhhhhcCccccc
Q 012021          208 GYLPFHDSNLMEMYRKIGKA--EFKFPN--WFAPEVRRLLSKILDPNPNTRI---SMTKIMENSWFRK  268 (472)
Q Consensus       208 G~~Pf~~~~~~~~~~~i~~~--~~~~~~--~~s~~l~~li~~~L~~dP~~Rp---t~~eil~h~~f~~  268 (472)
                      |+.||.+.+..+....+...  ...+|.  .+++++.++|.+|+ .+|.+|+   |+.++++||||+.
T Consensus       240 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         240 GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             CCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            99999988877666655433  223333  47899999999976 5999999   9999999999985


No 42 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00  E-value=2.9e-48  Score=395.45  Aligned_cols=257  Identities=34%  Similarity=0.664  Sum_probs=223.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+|+.++||||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47999999999999999999999999999999998765444455667889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC---
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD---  165 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~---  165 (472)
                      ||+.||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.........   
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            99999999998865 67999999999999999999999999999999999999999999999999998654321100   


Q ss_pred             ---------------------------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCC
Q 012021          166 ---------------------------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPF  212 (472)
Q Consensus       166 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf  212 (472)
                                                       ......+||+.|+|||++.+.++. .++|||||||++|+|++|..||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~~G~~Pf  239 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYN-KECDWWSLGVIMYEMLVGYPPF  239 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCC-CeeeeecchhHHHHhhcCCCCC
Confidence                                             011235799999999999877765 8999999999999999999999


Q ss_pred             CCCcHHHHHHHHhccC--CCCCC--CCCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          213 HDSNLMEMYRKIGKAE--FKFPN--WFAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       213 ~~~~~~~~~~~i~~~~--~~~~~--~~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      ...+....+..+....  ..+|.  .+++++++||.+||. +|.+|++   ++++++||||+.
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~  301 (364)
T cd05599         240 CSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG  301 (364)
T ss_pred             CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            9988877777775433  33443  368999999999997 9999998   999999999975


No 43 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00  E-value=3.1e-48  Score=382.05  Aligned_cols=254  Identities=26%  Similarity=0.452  Sum_probs=219.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++.+.||+|+||+||+|.+..+|+.||+|.+.+...........+.+|+.+++.++|+||+++++++.+++..|+|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            38899999999999999999999999999999987654433344567899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+.+|+|.+.+..   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......   ..
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~  157 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG---ET  157 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC---Ce
Confidence            9999999877643   36899999999999999999999999999999999999999999999999998764321   12


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhccCCCCCCCCCHHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKAEFKFPNWFAPEVRRLL  243 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~s~~l~~li  243 (472)
                      .....||+.|+|||++.+..+. .++|||||||++|+|++|+.||...+.    ......+......++..+++++.+||
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  236 (285)
T cd05631         158 VRGRVGTVGYMAPEVINNEKYT-FSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSIC  236 (285)
T ss_pred             ecCCCCCCCccCHhhhcCCCCC-cccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHH
Confidence            2456799999999999877665 789999999999999999999987543    23333444555667778999999999


Q ss_pred             hcccCCCCCCcCC-----hhhhhcCccccc
Q 012021          244 SKILDPNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       244 ~~~L~~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      ++||+.||.+||+     ++++++||||..
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         237 RMLLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            9999999999997     899999999976


No 44 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00  E-value=5.8e-48  Score=396.14  Aligned_cols=258  Identities=32%  Similarity=0.552  Sum_probs=221.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            69999999999999999999999999999999987665555566789999999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC-----
Q 012021           91 YVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ-----  164 (472)
Q Consensus        91 ~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~-----  164 (472)
                      |++||+|.+++.+ +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........     
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            9999999998865 6799999999999999999999999999999999999999999999999999753311000     


Q ss_pred             ----------------------------------------CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHH
Q 012021          165 ----------------------------------------DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYV  204 (472)
Q Consensus       165 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~  204 (472)
                                                              .....+.+||+.|+|||++.+.++. .++|||||||++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlG~il~e  240 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILFE  240 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC-CccceeehhhHHHH
Confidence                                                    0011345799999999999877765 89999999999999


Q ss_pred             HhcCCCCCCCCcHHHHHHHHhc--cCCCCCC--CCCHHHHHHHhccc--CCCCCCcCChhhhhcCcccccC
Q 012021          205 LLAGYLPFHDSNLMEMYRKIGK--AEFKFPN--WFAPEVRRLLSKIL--DPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       205 lltG~~Pf~~~~~~~~~~~i~~--~~~~~~~--~~s~~l~~li~~~L--~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      |++|..||...+..+...++..  ....+|.  .+++++.+||.+|+  ..+|..|++++++++||||...
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         241 MLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             HHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            9999999998877666555543  2344444  47999999999955  5566669999999999999863


No 45 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00  E-value=4.4e-48  Score=387.14  Aligned_cols=251  Identities=31%  Similarity=0.616  Sum_probs=221.2

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL-VRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||.||+|++..+|+.||+|++.+...........+..|..++.. .+||||+++++++.+++.+|+||||+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999999999999999987543322344566778888875 4899999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......  .......+|
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCceeccCC
Confidence            999988865 67999999999999999999999999999999999999999999999999998643221  122355789


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||...+.......+......+|.+++.+++++|.+||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  237 (316)
T cd05620         159 TPDYIAPEILQGLKYT-FSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTR  237 (316)
T ss_pred             CcCccCHHHHcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHH
Confidence            9999999999877765 889999999999999999999999888888888888888889999999999999999999999


Q ss_pred             cCCh-hhhhcCcccccC
Q 012021          254 RISM-TKIMENSWFRKG  269 (472)
Q Consensus       254 Rpt~-~eil~h~~f~~~  269 (472)
                      ||++ +++++||||+..
T Consensus       238 R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         238 RLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             cCCChHHHHcCCCcCCC
Confidence            9998 589999999763


No 46 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00  E-value=5.2e-48  Score=387.67  Aligned_cols=255  Identities=32%  Similarity=0.589  Sum_probs=227.5

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCC-CeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHP-NVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp-nIv~l~~~~~~~~~~~lV~   89 (472)
                      +|++++.||+|+||.||+|.+..+++.||+|++.+.........+.+..|+.++..++|+ +|+++++++.+.+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            589999999999999999999999999999999876544444556788899999999764 6889999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||++||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~  158 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG--GKTT  158 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC--CCce
Confidence            99999999988865 67999999999999999999999999999999999999999999999999998643221  1223


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+..+.+..+......+|..+++++.++|++||.
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~  237 (324)
T cd05587         159 RTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLT  237 (324)
T ss_pred             eeecCCccccChhhhcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence            456899999999999877664 7899999999999999999999999888889999888888999999999999999999


Q ss_pred             CCCCCcCCh-----hhhhcCccccc
Q 012021          249 PNPNTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt~-----~eil~h~~f~~  268 (472)
                      .||.+|++.     +++++||||+.
T Consensus       238 ~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         238 KHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             cCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            999999987     79999999975


No 47 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00  E-value=3.4e-48  Score=388.59  Aligned_cols=250  Identities=32%  Similarity=0.650  Sum_probs=223.4

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.++..+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999876543334456677888888876 699999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~~~~~~g  158 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKTTSTFCG  158 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCccccccc
Confidence            999988865 68999999999999999999999999999999999999999999999999998743221  122345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|+.||...+....+..+.......|.++++++.++|++||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~  237 (320)
T cd05590         159 TPDYIAPEILQEMLYG-PSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTM  237 (320)
T ss_pred             CccccCHHHHcCCCCC-CccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHH
Confidence            9999999999876664 789999999999999999999999998889999988888999999999999999999999999


Q ss_pred             cCCh------hhhhcCccccc
Q 012021          254 RISM------TKIMENSWFRK  268 (472)
Q Consensus       254 Rpt~------~eil~h~~f~~  268 (472)
                      ||++      ++++.||||..
T Consensus       238 R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         238 RLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             CCCCCCCCCHHHHHcCCCcCC
Confidence            9998      89999999975


No 48 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00  E-value=5.3e-48  Score=395.03  Aligned_cols=262  Identities=30%  Similarity=0.548  Sum_probs=228.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            44678999999999999999999999999999999997654433344566789999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           87 FVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      +||||++||+|.+++..+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus       120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~-~  198 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM-V  198 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc-c
Confidence            999999999999999888899999999999999999999999999999999999999999999999999876532211 1


Q ss_pred             ccccccCCCcccChhhhcccC---CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCC--CCCHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRRG---YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPN--WFAPEV  239 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~---~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~--~~s~~l  239 (472)
                      .....+||+.|+|||++....   ..+.++|||||||++|+|++|..||.+.+....+.++....  ..+|.  .++.++
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  278 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQA  278 (370)
T ss_pred             cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHH
Confidence            124568999999999986542   34589999999999999999999999988888888886543  44555  479999


Q ss_pred             HHHHhcccCCCCCC--cCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNT--RISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~--Rpt~~eil~h~~f~~~  269 (472)
                      .+||.+||..+|.+  |+|++++++||||+..
T Consensus       279 ~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         279 KDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            99999999999998  9999999999999863


No 49 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=100.00  E-value=4.4e-48  Score=396.32  Aligned_cols=257  Identities=32%  Similarity=0.611  Sum_probs=221.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            47999999999999999999999999999999997655444455678899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC---
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD---  165 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~---  165 (472)
                      ||++||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........   
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            99999999998865 67999999999999999999999999999999999999999999999999998632110000   


Q ss_pred             ------------------------------------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHH
Q 012021          166 ------------------------------------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILY  203 (472)
Q Consensus       166 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  203 (472)
                                                                ......+||+.|+|||++.+..+. .++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~  239 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG-QECDWWSLGAIMF  239 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC-CceeeEecchhhh
Confidence                                                      000135799999999999877765 8999999999999


Q ss_pred             HHhcCCCCCCCCcHHHHHHHHhcc--CCCCCC--CCCHHHHHHHhcccCCCCCCc---CChhhhhcCccccc
Q 012021          204 VLLAGYLPFHDSNLMEMYRKIGKA--EFKFPN--WFAPEVRRLLSKILDPNPNTR---ISMTKIMENSWFRK  268 (472)
Q Consensus       204 ~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~--~~s~~l~~li~~~L~~dP~~R---pt~~eil~h~~f~~  268 (472)
                      +|++|..||...+..+.+..+...  ...+|.  .+++++.+||.+||. +|.+|   +|+.+++.||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         240 ECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             hhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            999999999988887777777642  344554  378999999999998 67765   59999999999974


No 50 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=100.00  E-value=6.6e-48  Score=394.29  Aligned_cols=263  Identities=30%  Similarity=0.574  Sum_probs=227.4

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+..++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.++..+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            34567899999999999999999999999999999999765443334456688999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           86 YFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |+||||++||+|.+++....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|........ 
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~-  197 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-  197 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc-
Confidence            9999999999999999888899999999999999999999999999999999999999999999999999876532211 


Q ss_pred             CccccccCCCcccChhhhcccC---CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCC--CCCHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRG---YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPN--WFAPE  238 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~---~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~--~~s~~  238 (472)
                      ....+.+||+.|+|||++.+.+   +.+.++|||||||++|+|++|..||...+....+.++...  ...+|.  .+++.
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~  277 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKH  277 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHH
Confidence            1124568999999999987643   3457999999999999999999999998888888877653  345555  36899


Q ss_pred             HHHHHhcccCCCCCC--cCChhhhhcCcccccC
Q 012021          239 VRRLLSKILDPNPNT--RISMTKIMENSWFRKG  269 (472)
Q Consensus       239 l~~li~~~L~~dP~~--Rpt~~eil~h~~f~~~  269 (472)
                      ++++|.+||..++.+  |+|+.++++||||+..
T Consensus       278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            999999999866554  8999999999999863


No 51 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00  E-value=7.4e-48  Score=395.35  Aligned_cols=257  Identities=35%  Similarity=0.618  Sum_probs=221.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            37999999999999999999999999999999998765444455678899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc-----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH-----  163 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~-----  163 (472)
                      ||++||+|.+++.+ +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            99999999998865 679999999999999999999999999999999999999999999999999975321100     


Q ss_pred             ----------------------------------------CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHH
Q 012021          164 ----------------------------------------QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILY  203 (472)
Q Consensus       164 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  203 (472)
                                                              ......+.+||+.|+|||++.+.++. .++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlGvil~  239 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILY  239 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC-CeeeEEechHHHH
Confidence                                                    00011245799999999999888776 8999999999999


Q ss_pred             HHhcCCCCCCCCcHHHHHHHHhcc--CCCCC--CCCCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          204 VLLAGYLPFHDSNLMEMYRKIGKA--EFKFP--NWFAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       204 ~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~--~~~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      +|++|+.||...+..+...++...  ...+|  ..+++++.++|.+|+ .+|.+|++   ++++++||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            999999999988877666666542  23344  347999999999976 59999997   999999999976


No 52 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00  E-value=5e-48  Score=387.30  Aligned_cols=250  Identities=32%  Similarity=0.618  Sum_probs=223.8

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+...........+..|..+++.+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999999999999999999876544444556677899998865 799999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      ++|...+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g  158 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--GVTTTTFCG  158 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC--Ccccccccc
Confidence            999988865 67999999999999999999999999999999999999999999999999998753322  122345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|+.||...+....+..+......+|.++++++.++|.+||+.||++
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~  237 (321)
T cd05591         159 TPDYIAPEILQELEYG-PSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNK  237 (321)
T ss_pred             CccccCHHHHcCCCCC-CccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHH
Confidence            9999999999877665 789999999999999999999999999999999998888899999999999999999999999


Q ss_pred             cC-------ChhhhhcCccccc
Q 012021          254 RI-------SMTKIMENSWFRK  268 (472)
Q Consensus       254 Rp-------t~~eil~h~~f~~  268 (472)
                      |+       +++++++||||..
T Consensus       238 R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         238 RLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             cCCCCCCCCCHHHHhcCCccCC
Confidence            99       8999999999965


No 53 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00  E-value=3.7e-48  Score=388.96  Aligned_cols=250  Identities=37%  Similarity=0.678  Sum_probs=223.7

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+.||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999999999999999998765444444567788999999999999999999999999999999999999


Q ss_pred             cccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           96 ELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        96 ~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      +|..++.. +.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||++......  .......+|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g  158 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCG  158 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--CcccccccC
Confidence            99988865 579999999999999999999997 79999999999999999999999999998643221  122345679


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||...+.......+......+|..+++++.++|.+||+.||++
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         159 TPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             CcccCCHHHHccCCCC-CccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence            9999999999877664 899999999999999999999999888888888888888899999999999999999999999


Q ss_pred             cC-----ChhhhhcCccccc
Q 012021          254 RI-----SMTKIMENSWFRK  268 (472)
Q Consensus       254 Rp-----t~~eil~h~~f~~  268 (472)
                      |+     ++.++++||||..
T Consensus       238 R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCC
Confidence            97     8999999999975


No 54 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=100.00  E-value=4.1e-48  Score=391.72  Aligned_cols=257  Identities=33%  Similarity=0.661  Sum_probs=226.8

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            57999999999999999999999999999999998765444455677899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc-----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH-----  163 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~-----  163 (472)
                      ||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            99999999999866 589999999999999999999999999999999999999999999999999987654322     


Q ss_pred             ----------------------CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHH
Q 012021          164 ----------------------QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMY  221 (472)
Q Consensus       164 ----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~  221 (472)
                                            .........||+.|+|||++.+..+. .++|||||||++|+|++|..||...+....+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYG-LECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC-CceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence                                  00123345799999999999887664 8999999999999999999999998887777


Q ss_pred             HHHhc--cCCCCCCC--CCHHHHHHHhcccCCCCCCcCC-hhhhhcCccccc
Q 012021          222 RKIGK--AEFKFPNW--FAPEVRRLLSKILDPNPNTRIS-MTKIMENSWFRK  268 (472)
Q Consensus       222 ~~i~~--~~~~~~~~--~s~~l~~li~~~L~~dP~~Rpt-~~eil~h~~f~~  268 (472)
                      .++..  ....+|..  +++++.+||.+||. ||.+|++ ++++++||||+.
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            77766  44445544  59999999999997 9999999 999999999975


No 55 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=1.7e-47  Score=384.98  Aligned_cols=258  Identities=34%  Similarity=0.622  Sum_probs=221.3

Q ss_pred             CeEEEeeEcccCCeEEEEEEEc---CCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVL-KVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~   85 (472)
                      +|++++.||+|+||.||++++.   .+++.||+|++.+.... .....+.+.+|+.+++.++ ||||+++++++..++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999875   47899999999765432 2234567889999999994 99999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            999999999999998865 6799999999999999999999999999999999999999999999999999876433222


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC----cHHHHHHHHhccCCCCCCCCCHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS----NLMEMYRKIGKAEFKFPNWFAPEVR  240 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~----~~~~~~~~i~~~~~~~~~~~s~~l~  240 (472)
                       ......+||+.|+|||++.+....+.++|||||||++|+|++|..||...    ........+......+|..+++.+.
T Consensus       161 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (332)
T cd05614         161 -ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQ  239 (332)
T ss_pred             -CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHH
Confidence             12335689999999999976654568899999999999999999999642    3344555666677778888999999


Q ss_pred             HHHhcccCCCCCCcC-----ChhhhhcCcccccC
Q 012021          241 RLLSKILDPNPNTRI-----SMTKIMENSWFRKG  269 (472)
Q Consensus       241 ~li~~~L~~dP~~Rp-----t~~eil~h~~f~~~  269 (472)
                      ++|.+||..||++||     +++++++||||+..
T Consensus       240 ~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         240 DLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999999     78899999999863


No 56 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00  E-value=1.6e-47  Score=384.02  Aligned_cols=251  Identities=35%  Similarity=0.670  Sum_probs=222.1

Q ss_pred             EeeEcccCCeEEEEEEEc---CCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           15 GRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVLK-VGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      ++.||+|+||.||+|++.   .+++.||+|++.+..... ......+.+|+.+|+.++||||+++++++..++.+|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            368999999999999874   478999999997654321 2334567899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           91 YVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        91 ~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      |+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  .....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~  158 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE--GTVTH  158 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC--CCccc
Confidence            9999999999865 67899999999999999999999999999999999999999999999999998643221  12234


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~  249 (472)
                      ..+||+.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+..+...+|..+++++.++|.+||..
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  237 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHG-KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKR  237 (323)
T ss_pred             ccCCCccccChhhccCCCCC-CcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccc
Confidence            56899999999999877664 89999999999999999999999988888888888888899999999999999999999


Q ss_pred             CCCCcC-----ChhhhhcCccccc
Q 012021          250 NPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       250 dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      ||++||     +++++++||||+.
T Consensus       238 ~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         238 NPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             CHhHcCCCCCCCHHHHhcCCCcCC
Confidence            999999     8999999999975


No 57 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00  E-value=1.7e-47  Score=382.95  Aligned_cols=250  Identities=35%  Similarity=0.674  Sum_probs=220.3

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL-VRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+.........+.+..|..++.. .+||||+++++++..++.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999987654333444556677777765 4899999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  ......+|
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~g  158 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccC
Confidence            999988865 689999999999999999999999999999999999999999999999999987543221  22345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+......+|.+++.++.++|.+||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~  237 (316)
T cd05592         159 TPDYIAPEILKGQKYN-ESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTK  237 (316)
T ss_pred             CccccCHHHHcCCCCC-CcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHH
Confidence            9999999999877664 889999999999999999999999888888888888888889999999999999999999999


Q ss_pred             cCChh-hhhcCccccc
Q 012021          254 RISMT-KIMENSWFRK  268 (472)
Q Consensus       254 Rpt~~-eil~h~~f~~  268 (472)
                      ||++. ++++||||+.
T Consensus       238 R~~~~~~l~~h~~~~~  253 (316)
T cd05592         238 RLGVDGDIRQHPFFRG  253 (316)
T ss_pred             cCCChHHHHcCcccCC
Confidence            99875 8889999975


No 58 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00  E-value=1.6e-47  Score=383.99  Aligned_cols=255  Identities=32%  Similarity=0.586  Sum_probs=227.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .|++++.||+|+||+||+|++..+++.||+|++.+...........+..|..++..+ +||+|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            489999999999999999999999999999999876544334455677788888777 5899999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+++|+|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~--~~~~  158 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD--GVTT  158 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC--CCcc
Confidence            99999999988865 68999999999999999999999999999999999999999999999999998743321  1223


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+....+..+......+|..+++++.+++.+||+
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~  237 (323)
T cd05616         159 KTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT  237 (323)
T ss_pred             ccCCCChhhcCHHHhcCCCCC-CccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcc
Confidence            456899999999999877765 8999999999999999999999999888889999888888999999999999999999


Q ss_pred             CCCCCcCCh-----hhhhcCccccc
Q 012021          249 PNPNTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt~-----~eil~h~~f~~  268 (472)
                      .||.+|++.     .++++||||+.
T Consensus       238 ~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         238 KHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             cCHHhcCCCCCCCHHHHhcCCCcCC
Confidence            999999985     79999999975


No 59 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=100.00  E-value=1.5e-47  Score=376.63  Aligned_cols=254  Identities=28%  Similarity=0.450  Sum_probs=213.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||+||+|++..+++.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            5899999999999999999999999999999999765432 234567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+.++.+..+... +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........ ...
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~  158 (287)
T cd07848          80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-ANY  158 (287)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-ccc
Confidence            99998877655543 5799999999999999999999999999999999999999999999999999886543221 122


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-------------------C
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-------------------F  229 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-------------------~  229 (472)
                      ....||+.|+|||++.+..++ .++|||||||++|+|++|+.||...+..+....+....                   .
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         159 TEYVATRWYRSPELLLGAPYG-KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             cccccccccCCcHHHcCCCCC-CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence            345799999999999877764 79999999999999999999998765543332221110                   0


Q ss_pred             CC-------------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 KF-------------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ~~-------------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..             ...+++++.+||.+||+.||++|||++++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            01             11267889999999999999999999999999998


No 60 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00  E-value=1.7e-47  Score=377.40  Aligned_cols=253  Identities=29%  Similarity=0.460  Sum_probs=212.6

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +++|++.+.||.|+||.||+|++..+++.||+|++......  .....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            56899999999999999999999999999999999754321  2235677999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.+ +|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .
T Consensus        82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~--~  158 (288)
T cd07871          82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT--K  158 (288)
T ss_pred             EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--c
Confidence            999975 88887754  358999999999999999999999999999999999999999999999999987543221  2


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC------------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE------------------  228 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~------------------  228 (472)
                      ......||+.|+|||++.+....+.++|||||||++|+|++|+.||...+..+....+....                  
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR  238 (288)
T ss_pred             cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence            23456789999999998765444589999999999999999999998877655444332110                  


Q ss_pred             -CCC-----------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 -FKF-----------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 -~~~-----------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                       ..+           ...+++++.+||++||+.||.+|||++|+++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence             011           12367899999999999999999999999999998


No 61 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00  E-value=2.4e-47  Score=383.63  Aligned_cols=257  Identities=30%  Similarity=0.580  Sum_probs=223.1

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            47999999999999999999999999999999998765444445677889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||++||+|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........ ..
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-~~  159 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-VN  159 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc-ee
Confidence            99999999999865  5799999999999999999999999999999999999999999999999999876543221 11


Q ss_pred             cccccCCCcccChhhhcc-----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCC--CCCCHH
Q 012021          168 LHTTCGTPAYVAPEVINR-----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFP--NWFAPE  238 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~--~~~s~~  238 (472)
                      ....+||+.|+|||++..     ....+.++|||||||++|+|++|..||...+....+.++....  ..+|  ..++++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (330)
T cd05601         160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSD  239 (330)
T ss_pred             eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHH
Confidence            234579999999999863     2233578999999999999999999999888777777765432  2333  357899


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +.+||.+||. +|.+|||++++++||||+.
T Consensus       240 ~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         240 FLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             HHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            9999999998 9999999999999999986


No 62 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00  E-value=1.9e-47  Score=384.71  Aligned_cols=250  Identities=31%  Similarity=0.587  Sum_probs=218.5

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999999999999999999876554445567788999999888 699999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .....+.+|
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g  158 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC--CCccccccC
Confidence            999888754 68999999999999999999999999999999999999999999999999998642211  122345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC---------cHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS---------NLMEMYRKIGKAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~---------~~~~~~~~i~~~~~~~~~~~s~~l~~li~  244 (472)
                      |+.|+|||++.+..++ .++|+|||||++|+|++|+.||...         .....+..+......+|..+++++.++|.
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~  237 (329)
T cd05588         159 TPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLK  237 (329)
T ss_pred             CccccCHHHHcCCCCC-CccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            9999999999877665 7999999999999999999999631         12234566677778889999999999999


Q ss_pred             cccCCCCCCcCC------hhhhhcCccccc
Q 012021          245 KILDPNPNTRIS------MTKIMENSWFRK  268 (472)
Q Consensus       245 ~~L~~dP~~Rpt------~~eil~h~~f~~  268 (472)
                      +||..||.+|+|      ++++++||||..
T Consensus       238 ~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         238 GFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            999999999997      789999999965


No 63 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00  E-value=3.1e-47  Score=381.19  Aligned_cols=251  Identities=33%  Similarity=0.662  Sum_probs=224.3

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999876544444556778899999887 699999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      ++|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--GVTTSTFCG  158 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC--CCcccceec
Confidence            999988865 58999999999999999999999999999999999999999999999999998643221  122345679


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+......+|..+++++.+||.+||..||++
T Consensus       159 ~~~y~aPE~~~~~~~~-~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~  237 (318)
T cd05570         159 TPDYIAPEILSYQPYG-PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEK  237 (318)
T ss_pred             CccccCHHHhcCCCCC-cchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHH
Confidence            9999999999877765 799999999999999999999999888888888888888889899999999999999999999


Q ss_pred             cCCh-----hhhhcCcccccC
Q 012021          254 RISM-----TKIMENSWFRKG  269 (472)
Q Consensus       254 Rpt~-----~eil~h~~f~~~  269 (472)
                      |||+     .++++||||+..
T Consensus       238 R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         238 RLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            9999     999999999763


No 64 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00  E-value=2.1e-47  Score=388.91  Aligned_cols=257  Identities=33%  Similarity=0.618  Sum_probs=223.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..++||||+++++.+.+++.+|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999998655444455678889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ----  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~----  164 (472)
                      ||++||+|.+++.+ +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++........    
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            99999999999865 6799999999999999999999999999999999999999999999999999874422110    


Q ss_pred             -----------------------------CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC
Q 012021          165 -----------------------------DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS  215 (472)
Q Consensus       165 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~  215 (472)
                                                   .......+||+.|+|||++.+.++. .++|||||||++|+|++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC-CcceeccccceeeecccCCCCCCCC
Confidence                                         0112245899999999999887775 7999999999999999999999998


Q ss_pred             cHHHHHHHHhcc--CCCCCCC--CCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          216 NLMEMYRKIGKA--EFKFPNW--FAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       216 ~~~~~~~~i~~~--~~~~~~~--~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      +....+.++...  ...+|+.  +++++++||.+|+. ||.+|++   ++++++||||+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         240 TPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence            888877777643  3344543  78999999999874 9999984   799999999985


No 65 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=100.00  E-value=3.6e-47  Score=380.55  Aligned_cols=251  Identities=34%  Similarity=0.633  Sum_probs=220.9

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL-VRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+..............|..+++. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999987643322334556678888876 5899999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAKTCTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCceeeecC
Confidence            999999875 57999999999999999999999999999999999999999999999999998643221  122345679


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||...+....+..+......+|.+++.++.++|.+||+.||++
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~  237 (316)
T cd05619         159 TPDYIAPEILLGQKYN-TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPER  237 (316)
T ss_pred             CccccCHHHHcCCCCC-chhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhh
Confidence            9999999999877665 899999999999999999999999888888888877777888899999999999999999999


Q ss_pred             cCChh-hhhcCcccccC
Q 012021          254 RISMT-KIMENSWFRKG  269 (472)
Q Consensus       254 Rpt~~-eil~h~~f~~~  269 (472)
                      ||++. ++++||||+..
T Consensus       238 R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         238 RLGVKGDIRQHPFFREI  254 (316)
T ss_pred             cCCChHHHHcCcccCCC
Confidence            99996 89999999763


No 66 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.2e-48  Score=373.33  Aligned_cols=260  Identities=28%  Similarity=0.443  Sum_probs=222.8

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-----C
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-----K   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~   82 (472)
                      +..+|..++.||.|+||.|+.|.++.+|+.||||.+.... ...-.+++..||+.+|+.++|+||+.+++++..     -
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            4457777899999999999999999999999999986332 233556888899999999999999999999855     4


Q ss_pred             CEEEEEEEecCCCcccchhccCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           83 TKIYFVMEYVKGGELFGKVAKGK-LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~~~-l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      +.+|+|+|++ +.+|...++.++ +++..++.++.||+.||+|+|+.||+||||||.|+|++.++.+||+|||||+....
T Consensus        99 ~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen   99 NDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             ceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            5799999999 669999998876 99999999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc---------------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK---------------  226 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~---------------  226 (472)
                      ...++.++..+-|.+|.|||++.....++.+.||||+|||+.||++|++.|.+.+.......|..               
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s  257 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS  257 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence            44445567788999999999987665556899999999999999999999998776555544421               


Q ss_pred             --------cCCCC--------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          227 --------AEFKF--------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       227 --------~~~~~--------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                              ..+..        .+..++.+.+|+.+||..||.+|+|++|+|+||||..-
T Consensus       258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence                    11111        12468999999999999999999999999999999864


No 67 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00  E-value=5.4e-47  Score=380.18  Aligned_cols=250  Identities=34%  Similarity=0.620  Sum_probs=219.6

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHH-HHHhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREIS-VMRLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|.+..+|+.||+|++.+...........+.+|.. +++.++||||+++++++.+.+.+|+||||+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            47999999999999999999999999998765433333445555555 56889999999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKTTSTFCG  158 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCccccccC
Confidence            999988865 67999999999999999999999999999999999999999999999999998643221  122345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||...+..+.+..+.......++.+++++.++|.+||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         159 TPEYLAPEVLRKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             ChhhcChhhhcCCCCC-ccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHh
Confidence            9999999999877665 789999999999999999999999988888888888888888889999999999999999999


Q ss_pred             cCCh----hhhhcCccccc
Q 012021          254 RISM----TKIMENSWFRK  268 (472)
Q Consensus       254 Rpt~----~eil~h~~f~~  268 (472)
                      ||++    .++++||||..
T Consensus       238 R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         238 RLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCC
Confidence            9998    59999999975


No 68 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00  E-value=4.1e-47  Score=382.28  Aligned_cols=250  Identities=32%  Similarity=0.601  Sum_probs=217.5

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999876554445567788999998776 799999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  ......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g  158 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--CccccccC
Confidence            999888765 679999999999999999999999999999999999999999999999999987532211  12345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC---------CcHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD---------SNLMEMYRKIGKAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~---------~~~~~~~~~i~~~~~~~~~~~s~~l~~li~  244 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||..         ......+..+......+|..++.++.++|.
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~  237 (329)
T cd05618         159 TPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK  237 (329)
T ss_pred             CccccCHHHHcCCCCC-CccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            9999999999877665 799999999999999999999952         112334556667778889999999999999


Q ss_pred             cccCCCCCCcCC------hhhhhcCccccc
Q 012021          245 KILDPNPNTRIS------MTKIMENSWFRK  268 (472)
Q Consensus       245 ~~L~~dP~~Rpt------~~eil~h~~f~~  268 (472)
                      +||..||++|||      ++++++||||+.
T Consensus       238 ~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         238 SFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             HHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            999999999998      579999999975


No 69 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00  E-value=4.1e-47  Score=377.19  Aligned_cols=256  Identities=28%  Similarity=0.452  Sum_probs=209.5

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||+|+||+||+|++..+++.||+|++......  .....+.+|+.+++.++||||+++++++.++...|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            46899999999999999999999999999999999754321  2234567899999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+. ++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~  158 (303)
T cd07869          82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--H  158 (303)
T ss_pred             EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--c
Confidence            99996 567666654  579999999999999999999999999999999999999999999999999987543221  2


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH-HHHHHHHhcc--C---------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL-MEMYRKIGKA--E---------------  228 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-~~~~~~i~~~--~---------------  228 (472)
                      .....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+... ......+...  .               
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T cd07869         159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHF  238 (303)
T ss_pred             cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence            234567899999999987655455789999999999999999999987433 2222222110  0               


Q ss_pred             ----CC--CCC---------CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          229 ----FK--FPN---------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       229 ----~~--~~~---------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                          +.  .+.         .+++++.+||.+||+.||++|||+.++++||||++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence                00  000         135678999999999999999999999999999863


No 70 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00  E-value=6.6e-47  Score=379.85  Aligned_cols=250  Identities=34%  Similarity=0.608  Sum_probs=219.0

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHH-HHHhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREIS-VMRLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|.+..+|+.||+|++.+...........+.+|.. +++.++||||+++++++..++.+|+||||+.|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999999999999999997664433333445556655 46789999999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  .......+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~~~g  158 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTTTTFCG  158 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCcccccC
Confidence            999888865 67999999999999999999999999999999999999999999999999998743221  122345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..++ .++|||||||++|+|++|..||...+..+++..+.......++..+.++.++|.+||..||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~  237 (325)
T cd05604         159 TPEYLAPEVIRKQPYD-NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQR  237 (325)
T ss_pred             ChhhCCHHHHcCCCCC-CcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHh
Confidence            9999999999877765 799999999999999999999999988888888888877777789999999999999999999


Q ss_pred             cCCh----hhhhcCccccc
Q 012021          254 RISM----TKIMENSWFRK  268 (472)
Q Consensus       254 Rpt~----~eil~h~~f~~  268 (472)
                      ||++    .++++||||..
T Consensus       238 R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         238 RLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             cCCCCCCHHHHhcCCCcCC
Confidence            9987    48999999975


No 71 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00  E-value=6.8e-47  Score=387.00  Aligned_cols=263  Identities=32%  Similarity=0.572  Sum_probs=226.5

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+..++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  118 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            34567999999999999999999999999999999999765443334456688999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           86 YFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |+||||++||+|.+++....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........ 
T Consensus       119 ~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~-  197 (371)
T cd05622         119 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-  197 (371)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc-
Confidence            9999999999999999888899999999999999999999999999999999999999999999999999876532211 


Q ss_pred             CccccccCCCcccChhhhcccC---CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCC--CCCHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRG---YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPN--WFAPE  238 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~---~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~--~~s~~  238 (472)
                      ....+.+||+.|+|||++...+   ..+.++|||||||++|+|++|..||...+....+.++....  ..+|.  .++.+
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE  277 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHH
Confidence            1124568999999999987543   34579999999999999999999999998888888876543  34443  58999


Q ss_pred             HHHHHhcccCCCCCC--cCChhhhhcCcccccC
Q 012021          239 VRRLLSKILDPNPNT--RISMTKIMENSWFRKG  269 (472)
Q Consensus       239 l~~li~~~L~~dP~~--Rpt~~eil~h~~f~~~  269 (472)
                      ++++|.+||..++.+  |+++++|++|+||+..
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            999999999854443  7899999999999763


No 72 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00  E-value=1.1e-46  Score=377.47  Aligned_cols=250  Identities=34%  Similarity=0.609  Sum_probs=219.2

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHH-HHHhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREIS-VMRLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+|+.||+|++.+...........+.+|.. +++.++||||+++++++.+.+..|+||||++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999999999999999998765433333445555554 67889999999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      ++|...+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  .......+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTSTFCG  158 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCccccccC
Confidence            999888865 67999999999999999999999999999999999999999999999999998743221  222345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..++ .++|||||||++|+|++|..||...+....+..+......+|...+.++.++|.+||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         159 TPEYLAPEVLRKEPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             CcccCCHHHhcCCCCC-CcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhh
Confidence            9999999999877665 789999999999999999999999988888888888888888889999999999999999999


Q ss_pred             cCChh----hhhcCccccc
Q 012021          254 RISMT----KIMENSWFRK  268 (472)
Q Consensus       254 Rpt~~----eil~h~~f~~  268 (472)
                      |++..    ++++|+||..
T Consensus       238 R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         238 RLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             cCCCCCCHHHHhCCCCcCC
Confidence            99764    9999999974


No 73 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00  E-value=7.3e-47  Score=379.42  Aligned_cols=255  Identities=32%  Similarity=0.588  Sum_probs=226.3

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .|++.+.||+|+||+||+|++..+|+.||+|++.+.........+.+..|+.+++.+. |++|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4789999999999999999999999999999998765444444567788999998886 577889999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||++||+|.+++.. +.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  ...
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~--~~~  158 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG--VTT  158 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC--ccc
Confidence            99999999998866 689999999999999999999999999999999999999999999999999987532211  123


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+......+|..+++++.+++.+||+
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~  237 (323)
T cd05615         159 RTFCGTPDYIAPEIIAYQPYG-KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMT  237 (323)
T ss_pred             cCccCCccccCHHHHcCCCCC-CccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcc
Confidence            456799999999999877664 7999999999999999999999999888888888888888999999999999999999


Q ss_pred             CCCCCcCCh-----hhhhcCccccc
Q 012021          249 PNPNTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt~-----~eil~h~~f~~  268 (472)
                      .+|.+|++.     .++++||||+.
T Consensus       238 ~~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         238 KHPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             cCHhhCCCCCCCCHHHHhcCcccCC
Confidence            999999984     68999999985


No 74 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00  E-value=4e-47  Score=380.18  Aligned_cols=251  Identities=36%  Similarity=0.654  Sum_probs=221.9

Q ss_pred             EeeEcccCCeEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           15 GRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      ++.||+|+||+||++++.   .+|+.||+|++.+.... ......+.+|+.+++.++||||+++++++.+++.+|+||||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence            368999999999999874   57899999999765432 22335677899999999999999999999999999999999


Q ss_pred             cCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021           92 VKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        92 ~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      +.+++|.+++.+ ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .....
T Consensus        80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~  157 (318)
T cd05582          80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYS  157 (318)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cceec
Confidence            999999998865 579999999999999999999999999999999999999999999999999987543321  22345


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCC
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPN  250 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~d  250 (472)
                      .+||+.|+|||++.+..+. .++|||||||++|+|++|+.||...+....+..+......+|..+++++.++|++||+.|
T Consensus       158 ~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~  236 (318)
T cd05582         158 FCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRN  236 (318)
T ss_pred             ccCChhhcCHHHHcCCCCC-CccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence            6899999999999877664 799999999999999999999999888888888888888899999999999999999999


Q ss_pred             CCCcCC-----hhhhhcCcccccC
Q 012021          251 PNTRIS-----MTKIMENSWFRKG  269 (472)
Q Consensus       251 P~~Rpt-----~~eil~h~~f~~~  269 (472)
                      |.+|||     +.+++.||||+..
T Consensus       237 P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         237 PANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HhHcCCCCCCCHHHHhCCCCcCCC
Confidence            999999     6779999999763


No 75 
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=9.7e-47  Score=380.01  Aligned_cols=250  Identities=30%  Similarity=0.517  Sum_probs=216.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcE-EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-E
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMS-VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-K   84 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~-vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~   84 (472)
                      +......+.+.||+|+||+||++..  .|+. ||+|++......... .+.+.+|+.+|.+++|||||+++|++.+.. .
T Consensus        38 i~~~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   38 IDPDELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGS  114 (362)
T ss_pred             cChHHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            3445566778899999999999988  5556 999999876654433 779999999999999999999999998887 7


Q ss_pred             EEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEcCCC-CEEEeeccchhhh
Q 012021           85 IYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRG-VCHRDLKPENLLLDEHG-NLKVSDFGLSALA  159 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~g-iiHrDlKp~NILld~~g-~vkl~DFGla~~~  159 (472)
                      ..+||||+++|+|++++..   +.++...+.+++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++..
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK  194 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence            9999999999999999954   68999999999999999999999999 99999999999999998 9999999999866


Q ss_pred             hcccCCCccccccCCCcccChhhhc--ccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh--ccCCCCCCCC
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVIN--RRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG--KAEFKFPNWF  235 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~--~~~~~~~~~~  235 (472)
                      ....  .......||+.|||||++.  ...|+ .++||||||+++|||+||+.||.+.........+.  ...+.+|..+
T Consensus       195 ~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~-~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~  271 (362)
T KOG0192|consen  195 VISK--TSMTSVAGTYRWMAPEVLRGEKSPYT-EKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKEC  271 (362)
T ss_pred             cccc--ccccCCCCCccccChhhhcCCCCcCC-ccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccC
Confidence            5432  1223468999999999998  44665 89999999999999999999999988755544443  3456677789


Q ss_pred             CHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          236 APEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       236 s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++.+..++.+||+.||.+||++.+|+.
T Consensus       272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  272 PPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            999999999999999999999999975


No 76 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00  E-value=4.5e-47  Score=381.76  Aligned_cols=249  Identities=31%  Similarity=0.593  Sum_probs=216.8

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc---CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV---RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      ||+|+||+||+|++..+|+.||+|++.+..............|..++...   +||||+++++++.+.+.+|+||||+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999999999999999999765443333344555677777655   699999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......  .......+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~g  158 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--NKTTNTFCG  158 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC--CCCccCccC
Confidence            999988865 67999999999999999999999999999999999999999999999999998753322  122346789


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCC-CCHHHHHHHhcccCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNW-FAPEVRRLLSKILDPNPN  252 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~-~s~~l~~li~~~L~~dP~  252 (472)
                      |+.|+|||++.+....+.++|||||||++|+|++|..||...+....+..+..+...+|.. +++++.++|.+||.+||.
T Consensus       159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~  238 (330)
T cd05586         159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQ  238 (330)
T ss_pred             CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHH
Confidence            9999999998765544589999999999999999999999998888888888877777754 799999999999999999


Q ss_pred             CcC----ChhhhhcCccccc
Q 012021          253 TRI----SMTKIMENSWFRK  268 (472)
Q Consensus       253 ~Rp----t~~eil~h~~f~~  268 (472)
                      +||    ++.++++||||..
T Consensus       239 ~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         239 HRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             HCCCCCCCHHHHhcCccccC
Confidence            998    7899999999975


No 77 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00  E-value=4e-46  Score=374.74  Aligned_cols=250  Identities=30%  Similarity=0.592  Sum_probs=218.4

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++..+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999876554445567788999999887 699999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      |+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~g  158 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDTTSTFCG  158 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCceecccC
Confidence            999888865 68999999999999999999999999999999999999999999999999998743221  122346789


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-------CcHHHHHHHHhccCCCCCCCCCHHHHHHHhcc
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-------SNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-------~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~  246 (472)
                      |+.|+|||++.+..+. .++|||||||++|+|++|..||..       ......+..+......+|..++..+.++|.+|
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~  237 (327)
T cd05617         159 TPNYIAPEILRGEEYG-FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGF  237 (327)
T ss_pred             CcccCCHHHHCCCCCC-chheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            9999999999877664 899999999999999999999953       12234556666677788888999999999999


Q ss_pred             cCCCCCCcCCh------hhhhcCccccc
Q 012021          247 LDPNPNTRISM------TKIMENSWFRK  268 (472)
Q Consensus       247 L~~dP~~Rpt~------~eil~h~~f~~  268 (472)
                      |..||.+|+++      .++++||||+.
T Consensus       238 L~~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         238 LNKDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             hccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence            99999999984      69999999976


No 78 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00  E-value=1.6e-46  Score=369.05  Aligned_cols=248  Identities=29%  Similarity=0.479  Sum_probs=213.8

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||+|+||+||++.+..+|+.||+|.+.+.........+.+..|+.+++.++||||+++++++..++.+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999999999999999999766544333446678899999999999999999999999999999999999999


Q ss_pred             cchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccccc
Q 012021           98 FGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTC  172 (472)
Q Consensus        98 ~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~  172 (472)
                      ...+.     ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++........  ......
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~  158 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYA  158 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cccccC
Confidence            87662     24699999999999999999999999999999999999999999999999999875543221  233457


Q ss_pred             CCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          173 GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       173 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ||+.|+|||++.+..++ .++|||||||++|+|++|+.||.....    ......+......+|..+++++.+++.+||+
T Consensus       159 g~~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (280)
T cd05608         159 GTPGFMAPELLQGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLA  237 (280)
T ss_pred             CCcCccCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhc
Confidence            99999999999877765 789999999999999999999976432    2334444555566777899999999999999


Q ss_pred             CCCCCcC-----ChhhhhcCccccc
Q 012021          249 PNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      .||++||     |++++++||||+.
T Consensus       238 ~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         238 KDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CCHHHhcCCCCCCHHHHhcChhhhc
Confidence            9999999     7899999999975


No 79 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00  E-value=4.5e-47  Score=361.39  Aligned_cols=258  Identities=31%  Similarity=0.432  Sum_probs=221.5

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CCEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KTKI   85 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~   85 (472)
                      ..+.|+.+..|++|+||.||+|+|+.|++.||+|.++.++- +.+.-=.-.|||.+|...+|||||.+-++...  -+.+
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke-k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE-KEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc-cCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            34579999999999999999999999999999999977652 22333345699999999999999999999754  4689


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+|||||+. +|..++..  .++...+++.++.|++.|++|||.+.|+||||||+|+|+...|.+||+|||||+.+.+..
T Consensus       153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            999999965 78888865  589999999999999999999999999999999999999999999999999999887653


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc----------------
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA----------------  227 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~----------------  227 (472)
                      .  .++..+-|.+|+|||.+.+...++.+.|+||+|||+.||+++++-|.+.+..+...+|-+.                
T Consensus       232 k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp  309 (419)
T KOG0663|consen  232 K--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP  309 (419)
T ss_pred             c--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence            2  3566678999999999999887779999999999999999999999998887777776421                


Q ss_pred             ---CCCCC------------CC-CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---EFKFP------------NW-FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---~~~~~------------~~-~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                         ...++            .. ++....+|+..+|..||.+|.|+.+.|+|+||.+.
T Consensus       310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence               01111            11 45788899999999999999999999999999874


No 80 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=100.00  E-value=1.9e-46  Score=376.59  Aligned_cols=250  Identities=35%  Similarity=0.620  Sum_probs=218.0

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHH-HHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREI-SVMRLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei-~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||+||+|++..+++.||+|++.+...........+.+|. .+++.++||||+++++++...+.+|+||||+.|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4799999999999999999999999999865433323333444444 456889999999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~~~~~~g  158 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTSTFCG  158 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCCcccccC
Confidence            999998865 67999999999999999999999999999999999999999999999999998753221  222345689


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+.|+|||++.+..++ .++|||||||++|+|++|..||...+..+.+..+......+++.+++++.++|.+||+.||.+
T Consensus       159 t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (325)
T cd05602         159 TPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTK  237 (325)
T ss_pred             CccccCHHHHcCCCCC-CccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHH
Confidence            9999999999877665 789999999999999999999999888888888887777888889999999999999999999


Q ss_pred             cCChh----hhhcCccccc
Q 012021          254 RISMT----KIMENSWFRK  268 (472)
Q Consensus       254 Rpt~~----eil~h~~f~~  268 (472)
                      |+++.    ++++|+||..
T Consensus       238 R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         238 RLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCCCHHHHhcCcccCC
Confidence            99876    8999999964


No 81 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=5.8e-46  Score=374.06  Aligned_cols=257  Identities=27%  Similarity=0.476  Sum_probs=218.8

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++++.||+|+||.||++++..+|..||+|++....  .....+.+.+|+.+|+.++||||+++++++..++.+|
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   79 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            45689999999999999999999999999999999997643  2234567999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      +||||++|++|.+++.. +.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++......  
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  157 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  157 (331)
T ss_pred             EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence            99999999999999875 5799999999999999999999986 6999999999999999999999999998755322  


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc------------------
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK------------------  226 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~------------------  226 (472)
                        ......||+.|+|||++.+..+. .++|||||||++|+|++|+.||...+..++...+..                  
T Consensus       158 --~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (331)
T cd06649         158 --MANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR  234 (331)
T ss_pred             --ccccCCCCcCcCCHhHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence              22455799999999999877664 799999999999999999999977655443322211                  


Q ss_pred             ----------------------------c-CCCCC-CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          227 ----------------------------A-EFKFP-NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       227 ----------------------------~-~~~~~-~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                                  . ....+ ..+++++++||.+||..||++|||+.+|++||||+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                                        0 01111 13678999999999999999999999999999998643


No 82 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=100.00  E-value=3.1e-46  Score=367.87  Aligned_cols=254  Identities=25%  Similarity=0.454  Sum_probs=219.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+++.+|+|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            48999999999999999999999999999999976554333334567789999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+.||+|.+.+..   ..+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||++.......   .
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~  157 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---T  157 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC---c
Confidence            9999999887743   469999999999999999999999999999999999999999999999999987643221   1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH----HHHHHhccCCCCCCCCCHHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME----MYRKIGKAEFKFPNWFAPEVRRLL  243 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~----~~~~i~~~~~~~~~~~s~~l~~li  243 (472)
                      ....+|++.|+|||++.+..+. .++||||+||++|+|++|..||.+.+...    ....+......++..+++.+.+||
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~-~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (285)
T cd05605         158 IRGRVGTVGYMAPEVVKNERYT-FSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC  236 (285)
T ss_pred             cccccCCCCccCcHHhcCCCCC-ccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence            2345799999999999776654 78999999999999999999998765432    223344445566777999999999


Q ss_pred             hcccCCCCCCcC-----ChhhhhcCccccc
Q 012021          244 SKILDPNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       244 ~~~L~~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      .+||..||++||     +++++++||||.+
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            999999999999     8999999999975


No 83 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00  E-value=2.7e-46  Score=376.19  Aligned_cols=256  Identities=31%  Similarity=0.502  Sum_probs=207.5

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----CEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----TKI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~~   85 (472)
                      ||++.+.||+|+||.||+|++..+|+.||||.+..... .......+.+|+.+++.++||||+++++++...     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            79999999999999999999999999999999864322 122345688999999999999999999988543     358


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||||+. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            99999995 688888765 5799999999999999999999999999999999999999999999999999875433221


Q ss_pred             C-CccccccCCCcccChhhhccc-CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh-----------------
Q 012021          165 D-GLLHTTCGTPAYVAPEVINRR-GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG-----------------  225 (472)
Q Consensus       165 ~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~-----------------  225 (472)
                      . ......+||+.|+|||++.+. ...+.++|||||||++|+|++|+.||.+.+.......+.                 
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE  238 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence            1 122446799999999998652 233579999999999999999999998765433221110                 


Q ss_pred             ----------ccC-CCC---CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          226 ----------KAE-FKF---PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       226 ----------~~~-~~~---~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                ... ..+   .+.+++++.++|.+||+.||++|||++++++||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence                      000 000   1236788999999999999999999999999999975


No 84 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00  E-value=4.4e-46  Score=375.04  Aligned_cols=258  Identities=30%  Similarity=0.567  Sum_probs=219.6

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||+||++++..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47999999999999999999999999999999998654444445567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+.||+|.+++.+  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~  159 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-VQ  159 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC-cc
Confidence            99999999999865  5799999999999999999999999999999999999999999999999999865433221 11


Q ss_pred             cccccCCCcccChhhhcc----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCC---CCCCHH
Q 012021          168 LHTTCGTPAYVAPEVINR----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFP---NWFAPE  238 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~---~~~s~~  238 (472)
                      ....+||+.|+|||++..    .+..+.++|||||||++|+|++|+.||...+..+.+..+....  +.+|   ..++++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  239 (331)
T cd05597         160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEE  239 (331)
T ss_pred             ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHH
Confidence            223579999999999863    2344578999999999999999999999888777777775432  3333   347899


Q ss_pred             HHHHHhcccCCCCCC--cCChhhhhcCccccc
Q 012021          239 VRRLLSKILDPNPNT--RISMTKIMENSWFRK  268 (472)
Q Consensus       239 l~~li~~~L~~dP~~--Rpt~~eil~h~~f~~  268 (472)
                      ++++|++||..++++  |+++.++++||||..
T Consensus       240 ~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         240 AKDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             HHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence            999999988664443  889999999999975


No 85 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-48  Score=382.97  Aligned_cols=255  Identities=34%  Similarity=0.566  Sum_probs=228.9

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ..|+..+.||+|+||.||+|.+..+++.||+|+++.+...  ...+.+.+|+.+|..++++||.++|+.+-.+..++++|
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            4688889999999999999999999999999999887643  45688999999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCC-CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAKGKL-KEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l-~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+.||++.+.++.+.+ +|.++..++++++.|+.|||+++.+|||||+.|||+..+|.+||+|||++.........  -
T Consensus        91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r--r  168 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR--R  168 (467)
T ss_pred             HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhc--c
Confidence            99999999999998765 99999999999999999999999999999999999999999999999998866544332  2


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhccc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~~L  247 (472)
                      .+.+|||.|||||++...+|+ .++||||||++.+||++|.+||.+..++.....|.+.. +.+...+++.+++||..||
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~-~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL  247 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYD-TKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACL  247 (467)
T ss_pred             ccccccccccchhhhcccccc-chhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHh
Confidence            788999999999999988887 79999999999999999999999887765444444433 3444568999999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccC
Q 012021          248 DPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      +.||+.||++.++|.|+|++..
T Consensus       248 ~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  248 DKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             hcCcccCcCHHHHhhhHHHHhc
Confidence            9999999999999999999873


No 86 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00  E-value=1.7e-45  Score=370.68  Aligned_cols=258  Identities=29%  Similarity=0.523  Sum_probs=220.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||+||++++..+++.||+|++.+...........+.+|+.+++.++|+||+++++++.+++..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            57999999999999999999999999999999997654433344566889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+.||+|.+++..  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~  159 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-VQ  159 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc-ee
Confidence            99999999999965  5799999999999999999999999999999999999999999999999999875543221 11


Q ss_pred             cccccCCCcccChhhhccc----CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCC---CCCHH
Q 012021          168 LHTTCGTPAYVAPEVINRR----GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPN---WFAPE  238 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~---~~s~~  238 (472)
                      ....+||+.|+|||++.+.    +..+.++|||||||++|+|++|+.||...+..+.+.++....  +.+|.   .++++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~  239 (331)
T cd05624         160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEE  239 (331)
T ss_pred             eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHH
Confidence            2345799999999998652    233578999999999999999999999888877777776533  33443   36899


Q ss_pred             HHHHHhcccCCCCCC--cCChhhhhcCccccc
Q 012021          239 VRRLLSKILDPNPNT--RISMTKIMENSWFRK  268 (472)
Q Consensus       239 l~~li~~~L~~dP~~--Rpt~~eil~h~~f~~  268 (472)
                      ++++|.+||..++.+  |++++++++||||+.
T Consensus       240 ~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         240 AKDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             HHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            999999999876654  568999999999975


No 87 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00  E-value=2e-46  Score=362.59  Aligned_cols=257  Identities=32%  Similarity=0.497  Sum_probs=219.1

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCC----
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN-VVELYEVMASKT----   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~----   83 (472)
                      +..|+.+++||+|+||+||+|+++.+|+.||+|.+..+.-. ++.-....+|+.+|+.++|+| |+++++++.+.+    
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~   88 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG   88 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence            55688889999999999999999999999999999776532 233455689999999999999 999999998887    


Q ss_pred             --EEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           84 --KIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        84 --~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                        .+|+|+||++ -+|..++..     ..++...++.+++||+.||+|||++||+||||||+|||++++|.+||+|||+|
T Consensus        89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   89 IGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             cceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence              8999999995 478888764     25888899999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---------
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---------  227 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---------  227 (472)
                      +......  ......++|.+|+|||++.+...++...||||+|||++||++++.-|.+.+..+...+|-+.         
T Consensus       168 ra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W  245 (323)
T KOG0594|consen  168 RAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW  245 (323)
T ss_pred             HHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence            9655332  22567789999999999999866678999999999999999999999998887766665321         


Q ss_pred             ---------CCCCCCC------------CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---------EFKFPNW------------FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---------~~~~~~~------------~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                               ...++.|            .+++..+++.+||+.+|.+|.|++.++.||||...
T Consensus       246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence                     1122322            23578899999999999999999999999999864


No 88 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00  E-value=5.5e-46  Score=388.43  Aligned_cols=251  Identities=26%  Similarity=0.417  Sum_probs=206.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      ..++|++++.||+|+||.||+|.+..+++.||||.+....       ....+|+.+|+.++||||+++++++...     
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence            4568999999999999999999999999999999886543       2345799999999999999999986432     


Q ss_pred             ---CEEEEEEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-CEEEeec
Q 012021           83 ---TKIYFVMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-NLKVSDF  153 (472)
Q Consensus        83 ---~~~~lV~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-~vkl~DF  153 (472)
                         ..+++||||+.+ +|.+++.     ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+||
T Consensus       137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence               257799999976 5655543     35799999999999999999999999999999999999999765 6999999


Q ss_pred             cchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------
Q 012021          154 GLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------  227 (472)
Q Consensus       154 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------  227 (472)
                      |+|.......   .....+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+..+.+.++...      
T Consensus       216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~  292 (440)
T PTZ00036        216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE  292 (440)
T ss_pred             ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            9998654322   1235678999999999876544458999999999999999999999887665544443211      


Q ss_pred             -----------CC------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 -----------EF------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 -----------~~------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                 ..            .+|...++++.+||.+||..||.+|||+.|+++||||...
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence                       01            1344567899999999999999999999999999999763


No 89 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00  E-value=1.4e-45  Score=371.48  Aligned_cols=258  Identities=28%  Similarity=0.535  Sum_probs=220.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||+||++++..+++.||+|++.+...........+.+|+.++..++|+||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47999999999999999999999999999999997654444344566889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+.+|+|.+++.+  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~-~~  159 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQ  159 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc-ce
Confidence            99999999999965  5799999999999999999999999999999999999999999999999999865432211 11


Q ss_pred             cccccCCCcccChhhhcc----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCC---CCCHH
Q 012021          168 LHTTCGTPAYVAPEVINR----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPN---WFAPE  238 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~---~~s~~  238 (472)
                      ....+||+.|+|||++..    ....+.++|||||||++|+|++|+.||...+..+.+.++....  ..+|.   .++++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~  239 (332)
T cd05623         160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSED  239 (332)
T ss_pred             ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHH
Confidence            234579999999999863    2334579999999999999999999999988888888776543  33333   47899


Q ss_pred             HHHHHhcccCCCCCC--cCChhhhhcCccccc
Q 012021          239 VRRLLSKILDPNPNT--RISMTKIMENSWFRK  268 (472)
Q Consensus       239 l~~li~~~L~~dP~~--Rpt~~eil~h~~f~~  268 (472)
                      +++||++||..++.+  |++++++++||||..
T Consensus       240 ~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         240 AKDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            999999999665544  789999999999975


No 90 
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00  E-value=9.8e-46  Score=391.59  Aligned_cols=259  Identities=31%  Similarity=0.519  Sum_probs=226.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT----   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----   83 (472)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.++..++|+||+++++.+....    
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            457999999999999999999999999999999999776543 244567889999999999999999998875432    


Q ss_pred             ----EEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeecc
Q 012021           84 ----KIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        84 ----~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                          .+++||||+++|+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence                47899999999999988753     468999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCC
Q 012021          155 LSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPN  233 (472)
Q Consensus       155 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~  233 (472)
                      +++............+.+||+.|+|||++.+..+. .++|||||||++|+|++|+.||...+..+.+.++..+.. .+|.
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s-~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  267 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS-KKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPP  267 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            98865543333334567899999999999877665 899999999999999999999999888777777765543 4677


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .+++++.+++.+||..||.+||++.++++|||++.
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            89999999999999999999999999999999875


No 91 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00  E-value=9.6e-46  Score=364.27  Aligned_cols=251  Identities=33%  Similarity=0.493  Sum_probs=207.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcC-CCcEEEEEEeecccccchhhHHHHHHHHHHHHhc---CCCCeeeEEEEEE-----
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLK-TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV---RHPNVVELYEVMA-----   80 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~-----   80 (472)
                      ++|++++.||+|+||+||+|++.. ++..||+|.+....... .....+.+|+.+++.+   +||||+++++++.     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            489999999999999999999865 47889999987554322 2334566788887766   6999999999985     


Q ss_pred             eCCEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      ....+|+||||+. ++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            3457999999996 578877754   458999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC--------
Q 012021          158 LAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF--------  229 (472)
Q Consensus       158 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~--------  229 (472)
                      .....   .......||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+..+.+.++.....        
T Consensus       159 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         159 IYSFQ---MALTSVVVTLWYRAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             eccCC---cccccccccccccChHHHhCCCCC-CccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            65432   223456799999999999776665 789999999999999999999998877666655542110        


Q ss_pred             -------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 -------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 -------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                         ...+.+++.+.++|.+||+.||++|||+.++++||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                               0112467889999999999999999999999999998


No 92 
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00  E-value=1.7e-45  Score=366.54  Aligned_cols=257  Identities=29%  Similarity=0.477  Sum_probs=213.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -+++|++.+.||+|+||+||+|++..+++.||+|.+......  .....+.+|+.+++.++||||+++++++..++..|+
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence            357899999999999999999999999999999998755422  223457789999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||+.+ +|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--  158 (309)
T cd07872          82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--  158 (309)
T ss_pred             EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence            9999975 77777654  458999999999999999999999999999999999999999999999999987543221  


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------  227 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------  227 (472)
                      .......+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+.+.                  
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07872         159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF  238 (309)
T ss_pred             cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence            12234578999999999876555568999999999999999999999877654443332210                  


Q ss_pred             -CCCCC-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 -EFKFP-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 -~~~~~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                       ...++           +.+++++++||.+||..||.+|||++|+++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence             01111           2368899999999999999999999999999999853


No 93 
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00  E-value=3.2e-45  Score=361.15  Aligned_cols=253  Identities=38%  Similarity=0.794  Sum_probs=229.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.....+|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            47999999999999999999999999999999997765544455678899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+++++|.+++.. +.+++..+..++.||+.||.|||++|++||||+|.|||++.++.+||+|||++......     .
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~  155 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----T  155 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----C
Confidence            99999999999865 67999999999999999999999999999999999999999999999999998765432     2


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...+|++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+....+..+..+...+|..+++.+.++|.+||.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  234 (290)
T cd05580         156 YTLCGTPEYLAPEIILSKGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQ  234 (290)
T ss_pred             CCCCCCccccChhhhcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHcc
Confidence            34579999999999876654 47899999999999999999999988877778888888888898899999999999999


Q ss_pred             CCCCCcC-----ChhhhhcCccccc
Q 012021          249 PNPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      .||.+|+     +++++++||||+.
T Consensus       235 ~~p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         235 VDLTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             CCHHHccCcccCCHHHHHcCccccc
Confidence            9999999     8999999999975


No 94 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00  E-value=2.2e-45  Score=373.13  Aligned_cols=255  Identities=30%  Similarity=0.476  Sum_probs=213.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ..+.|++++.||+|+||+||+|.+..+|+.||||++....  .......+.+|+.+++.++|+||+++++++...+.+|+
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  149 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV  149 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence            3567999999999999999999999999999999986543  22345678999999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           88 VMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||||+.+++|.+.   ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  .
T Consensus       150 v~e~~~~~~L~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~  224 (353)
T PLN00034        150 LLEFMDGGSLEGT---HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--P  224 (353)
T ss_pred             EEecCCCCccccc---ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--c
Confidence            9999999998653   3467888899999999999999999999999999999999999999999999876543211  1


Q ss_pred             cccccCCCcccChhhhcc----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcH---HHHHHHHh-ccCCCCCCCCCHHH
Q 012021          168 LHTTCGTPAYVAPEVINR----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNL---MEMYRKIG-KAEFKFPNWFAPEV  239 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~---~~~~~~i~-~~~~~~~~~~s~~l  239 (472)
                      .....||+.|+|||++..    ..+.+.++|||||||++|+|++|+.||.....   ......+. ......+..+++++
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREF  304 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHH
Confidence            245679999999998743    23455789999999999999999999974332   22222222 23345566789999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .+||.+||..||++|||+.|+++||||...
T Consensus       305 ~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        305 RHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            999999999999999999999999999874


No 95 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=2.6e-45  Score=373.27  Aligned_cols=256  Identities=28%  Similarity=0.487  Sum_probs=209.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC---
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT---   83 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~---   83 (472)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+   
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence            567899999999999999999999999999999999975532 2234567789999999999999999999986543   


Q ss_pred             ---EEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           84 ---KIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        84 ---~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                         .+|+||||+.+ +|...+. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          97 EFQDVYLVMELMDA-NLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             ccceeEEEEeCCCc-CHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence               57999999976 4555543 458999999999999999999999999999999999999999999999999987543


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--------------  226 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--------------  226 (472)
                      ..   .......||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+..              
T Consensus       175 ~~---~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (359)
T cd07876         175 TN---FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ  250 (359)
T ss_pred             cC---ccCCCCcccCCCCCchhccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHH
Confidence            21   223456789999999999877765 789999999999999999999987654333222110              


Q ss_pred             --------cCCC---------CCC-----------CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          227 --------AEFK---------FPN-----------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       227 --------~~~~---------~~~-----------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                              ....         ++.           ..++++++||.+||..||++|||+.|+++||||...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         251 PTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             HHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence                    0000         111           135789999999999999999999999999999753


No 96 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=3.4e-45  Score=386.45  Aligned_cols=256  Identities=28%  Similarity=0.472  Sum_probs=223.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCC-CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKT-GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ...|.+.+.||+|+||.||+|.+..+ ++.||+|.+....   ......+.+|+.+|+.++||||+++++++..++.+|+
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l  142 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL  142 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence            44599999999999999999998887 7889999875432   2334567889999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           88 VMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ||||++||+|.+.+..     ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence            9999999999887642     46899999999999999999999999999999999999999999999999999865443


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRR  241 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~  241 (472)
                      .......+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||...+..+....+..+.. .+|..+++++.+
T Consensus       223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  301 (478)
T PTZ00267        223 VSLDVASSFCGTPYYLAPELWERKRYS-KKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKA  301 (478)
T ss_pred             cccccccccCCCccccCHhHhCCCCCC-cHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHH
Confidence            222234566899999999999877664 889999999999999999999998888777777766554 456678999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCccccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +|.+||..||++||++++++.|+|++.
T Consensus       302 li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        302 LLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            999999999999999999999999974


No 97 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=1.6e-46  Score=377.58  Aligned_cols=258  Identities=31%  Similarity=0.532  Sum_probs=237.7

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE-EEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK-IYF   87 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~-~~l   87 (472)
                      +++|++++.+|+|+||.+++++++..++.+++|.++...... .......+|+.++++++|||||.+.+.|..++. .+|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            578999999999999999999999999999999998877544 334578899999999999999999999988887 999


Q ss_pred             EEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           88 VMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||+||+||+|.+.|.+   .-++|+.+..|+.||+.|+.|||+++|+|||||+.||++..++.|||.|||+|+...... 
T Consensus        82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-  160 (426)
T KOG0589|consen   82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-  160 (426)
T ss_pred             EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence            9999999999999965   259999999999999999999999999999999999999999999999999999887543 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLL  243 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li  243 (472)
                       ....+..|||.|++||++.+.+|. .++|||||||++|||++-+++|.+.+...+..+|.++. .+.|..++.+++.+|
T Consensus       161 -~~a~tvvGTp~YmcPEil~d~pYn-~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv  238 (426)
T KOG0589|consen  161 -SLASTVVGTPYYMCPEILSDIPYN-EKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLV  238 (426)
T ss_pred             -hhhheecCCCcccCHHHhCCCCCC-ccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHH
Confidence             346788999999999999999986 89999999999999999999999999999999998887 678888999999999


Q ss_pred             hcccCCCCCCcCChhhhhcCcccccCC
Q 012021          244 SKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +.||..+|..||++.++|.+|..+...
T Consensus       239 ~~~l~~~P~~RPsa~~LL~~P~l~~~~  265 (426)
T KOG0589|consen  239 KSMLRKNPEHRPSALELLRRPHLLRYL  265 (426)
T ss_pred             HHHhhcCCccCCCHHHHhhChhhhhHH
Confidence            999999999999999999999887543


No 98 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=4e-45  Score=368.41  Aligned_cols=257  Identities=27%  Similarity=0.453  Sum_probs=216.9

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||.||+|.+..++..+|+|++....  .......+.+|+.+++.++||||+++++++.+++.+|
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   79 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence            45689999999999999999999999999999999987653  2234567899999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      +||||+.|++|.+++.. +.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++....... 
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-  158 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-  158 (333)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence            99999999999999865 6799999999999999999999985 79999999999999999999999999987553321 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHH--------------------
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKI--------------------  224 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i--------------------  224 (472)
                         ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||...........+                    
T Consensus       159 ---~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (333)
T cd06650         159 ---ANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP  234 (333)
T ss_pred             ---cccCCCCccccCHHHhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence               2345799999999999776654 7899999999999999999999765443222111                    


Q ss_pred             ------------------------hcc-CCCCC-CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          225 ------------------------GKA-EFKFP-NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       225 ------------------------~~~-~~~~~-~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                              ... ....+ ..+++++++||.+||+.||++|||+.+++.||||+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                                    111 11111 13678999999999999999999999999999998643


No 99 
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00  E-value=1.1e-45  Score=356.67  Aligned_cols=252  Identities=40%  Similarity=0.685  Sum_probs=213.3

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |++++.||+|+||+||++.+..+++.||+|++........ ......+|+.+++.++||||+++++++......|+||||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999999999988764332 223445699999999999999999999999999999999


Q ss_pred             cCCCcccchhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021           92 VKGGELFGKVA-KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        92 ~~gg~L~~~i~-~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      +.+++|.+++. .+.+++..+..++.||+.||.+||++|++|+||||+||+++.++.++|+|||++....  ........
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~~~~~  157 (260)
T PF00069_consen   80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNENFNP  157 (260)
T ss_dssp             ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTSEBSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence            99999999997 5889999999999999999999999999999999999999999999999999987531  12223456


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc---HHHHHHHHhccCCCCCC----CCCHHHHHHH
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN---LMEMYRKIGKAEFKFPN----WFAPEVRRLL  243 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~---~~~~~~~i~~~~~~~~~----~~s~~l~~li  243 (472)
                      ..+|+.|+|||++......+.++||||||+++++|++|..||...+   ......+........+.    ..++++.++|
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  237 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI  237 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence            7889999999998734445689999999999999999999999873   33333333322221111    1238999999


Q ss_pred             hcccCCCCCCcCChhhhhcCccc
Q 012021          244 SKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .+||+.||++|||+.++++||||
T Consensus       238 ~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  238 KKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHccCChhHCcCHHHHhcCCCC
Confidence            99999999999999999999998


No 100
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00  E-value=9.6e-47  Score=354.39  Aligned_cols=255  Identities=34%  Similarity=0.670  Sum_probs=221.1

Q ss_pred             CCcccCCeEEE-eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEe-
Q 012021            5 GSILMQRYELG-RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMAS-   81 (472)
Q Consensus         5 g~~l~~~y~i~-~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~-   81 (472)
                      ..-+.+.|.+- +.||-|-.|+|-.+.++.||+.+|+|++...        ...++|++..-+. .|||||.++++|++ 
T Consensus        56 ~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   56 EYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENS  127 (400)
T ss_pred             cccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence            34466778876 6799999999999999999999999998543        3467899887655 59999999999854 


Q ss_pred             ---CCEEEEEEEecCCCcccchhcc-C--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC---CCEEEee
Q 012021           82 ---KTKIYFVMEYVKGGELFGKVAK-G--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH---GNLKVSD  152 (472)
Q Consensus        82 ---~~~~~lV~E~~~gg~L~~~i~~-~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~---g~vkl~D  152 (472)
                         ...+.+|||+++||+|++.|.. |  .++|.++..+++||..|+.|||+.+|.||||||||+|...+   ..+||+|
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence               4568899999999999999975 3  59999999999999999999999999999999999999754   4699999


Q ss_pred             ccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc----HHHHHHHHhccC
Q 012021          153 FGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN----LMEMYRKIGKAE  228 (472)
Q Consensus       153 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~----~~~~~~~i~~~~  228 (472)
                      ||+|+....   ...+.+.|-||+|+|||++....|+ ...|+||+||++|.||+|++||....    ...+..+|..+.
T Consensus       208 fGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKyd-kscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq  283 (400)
T KOG0604|consen  208 FGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ  283 (400)
T ss_pred             cccccccCC---CccccCCcccccccCHHHhCchhcC-CCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC
Confidence            999987653   3457899999999999999888876 78999999999999999999997643    346778899998


Q ss_pred             CCCCC--C--CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          229 FKFPN--W--FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       229 ~~~~~--~--~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      +.||.  |  +|.+++++|+.+|..+|.+|.|+.++++|||+.....
T Consensus       284 y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  284 YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            88874  4  7899999999999999999999999999999986543


No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=2.8e-45  Score=377.44  Aligned_cols=250  Identities=20%  Similarity=0.322  Sum_probs=205.6

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++++.||+|+||.||+|++..+++.||+|....         ..+.+|+.+|+.++||||+++++++..+...|
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence            345689999999999999999999999999999997532         34678999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +|||++. ++|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|....... .
T Consensus       160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~  237 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-A  237 (391)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-c
Confidence            9999995 678777754 679999999999999999999999999999999999999999999999999987543221 1


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc-------HHHHHHHH--------------
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN-------LMEMYRKI--------------  224 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-------~~~~~~~i--------------  224 (472)
                      ......+||+.|+|||++.+..+. .++|||||||++|+|++|..||....       .......+              
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~  316 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARDPYG-PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID  316 (391)
T ss_pred             cccccccCccCCCChhhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence            223456899999999999877664 89999999999999999998875321       01111111              


Q ss_pred             ------------hccC----CCCCC-----CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          225 ------------GKAE----FKFPN-----WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       225 ------------~~~~----~~~~~-----~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                  ....    ...|.     .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence                        0000    01111     14568999999999999999999999999999986


No 102
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=100.00  E-value=1.7e-45  Score=372.09  Aligned_cols=256  Identities=27%  Similarity=0.427  Sum_probs=213.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK----   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   82 (472)
                      .+.++|++++.||.|+||+||+|.+..+++.||+|.+.+.... ......+.+|+.+|+.++||||+++++++...    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE   90 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence            3567999999999999999999999999999999998754321 22345677899999999999999999987543    


Q ss_pred             --CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 --TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 --~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                        ...|+++|++ +++|.+++..+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        91 ~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878          91 NFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             ccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence              4579999988 7789888888889999999999999999999999999999999999999999999999999987543


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE------------  228 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~------------  228 (472)
                      .     .....+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+....            
T Consensus       170 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd07878         170 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS  244 (343)
T ss_pred             C-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence            2     12456799999999998775555689999999999999999999998766544433332110            


Q ss_pred             -----------CCC--------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          229 -----------FKF--------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       229 -----------~~~--------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                 ...        ....++.+.+||.+||..||.+|||+.++++||||...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence                       001        12356778999999999999999999999999999863


No 103
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00  E-value=9.5e-46  Score=380.77  Aligned_cols=253  Identities=31%  Similarity=0.470  Sum_probs=218.3

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-C-----CCeeeEEEE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-H-----PNVVELYEV   78 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h-----pnIv~l~~~   78 (472)
                      ++++..||+|++.||+|+||.|.+|.|..|++.||||+++..+    ....+...|+.||..|+ |     -|||+++++
T Consensus       181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~  256 (586)
T KOG0667|consen  181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY  256 (586)
T ss_pred             cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence            4556669999999999999999999999999999999997765    45677889999999997 4     489999999


Q ss_pred             EEeCCEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC--CEEEeec
Q 012021           79 MASKTKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG--NLKVSDF  153 (472)
Q Consensus        79 ~~~~~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g--~vkl~DF  153 (472)
                      |...++.|||+|.+ +-+|+++++.   .+++...++.+++||+.||.+||+.||||+|||||||||.+.+  .|||+||
T Consensus       257 F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF  335 (586)
T KOG0667|consen  257 FYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF  335 (586)
T ss_pred             cccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence            99999999999999 5689999976   4689999999999999999999999999999999999997654  6999999


Q ss_pred             cchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------
Q 012021          154 GLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------  227 (472)
Q Consensus       154 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------  227 (472)
                      |.|+....     ...+.+-+..|+|||++.+.+|+ .+.||||||||++||++|.+.|.+.+..+.+..|...      
T Consensus       336 GSSc~~~q-----~vytYiQSRfYRAPEVILGlpY~-~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~  409 (586)
T KOG0667|consen  336 GSSCFESQ-----RVYTYIQSRFYRAPEVILGLPYD-TAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP  409 (586)
T ss_pred             ccccccCC-----cceeeeeccccccchhhccCCCC-CccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence            99986532     23478899999999999999997 7899999999999999999999998887777666310      


Q ss_pred             ----------------------------------------------CCCCCCC-----------CCHHHHHHHhcccCCC
Q 012021          228 ----------------------------------------------EFKFPNW-----------FAPEVRRLLSKILDPN  250 (472)
Q Consensus       228 ----------------------------------------------~~~~~~~-----------~s~~l~~li~~~L~~d  250 (472)
                                                                    ....|..           -...+.+||++||+.|
T Consensus       410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d  489 (586)
T KOG0667|consen  410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD  489 (586)
T ss_pred             HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence                                                          0001100           0135789999999999


Q ss_pred             CCCcCChhhhhcCccccc
Q 012021          251 PNTRISMTKIMENSWFRK  268 (472)
Q Consensus       251 P~~Rpt~~eil~h~~f~~  268 (472)
                      |.+|+|..++|+||||..
T Consensus       490 P~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  490 PAERITPAQALNHPFLTG  507 (586)
T ss_pred             chhcCCHHHHhcCccccc
Confidence            999999999999999984


No 104
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00  E-value=2.7e-45  Score=375.05  Aligned_cols=257  Identities=26%  Similarity=0.448  Sum_probs=214.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-----EE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-----KI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~   85 (472)
                      .|++++.||+|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.++||||+++++++...+     ..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence            47899999999999999999999999999999865422 2234567889999999999999999999998776     89


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||||+. ++|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            99999996 467776654 6799999999999999999999999999999999999999999999999999876543221


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc------------------
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK------------------  226 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~------------------  226 (472)
                       .......+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+..                  
T Consensus       159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  237 (372)
T cd07853         159 -KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR  237 (372)
T ss_pred             -ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence             2233457899999999998765556899999999999999999999988766554443321                  


Q ss_pred             -----cCC---------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          227 -----AEF---------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       227 -----~~~---------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                           ...         .+....++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence                 111         12234678999999999999999999999999999998753


No 105
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=100.00  E-value=6.8e-45  Score=358.45  Aligned_cols=254  Identities=27%  Similarity=0.486  Sum_probs=216.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|+||+++++.+.+.+.+|+|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            48899999999999999999999999999999976654443444567789999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+.|++|.+++..   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......   .
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~  157 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---T  157 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc---c
Confidence            9999999888743   369999999999999999999999999999999999999999999999999986543221   1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH---HHHHH-HhccCCCCCCCCCHHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM---EMYRK-IGKAEFKFPNWFAPEVRRLL  243 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~---~~~~~-i~~~~~~~~~~~s~~l~~li  243 (472)
                      .....||+.|+|||++.+..+. .++||||||+++|+|++|..||......   ..... ........+..+++++.+|+
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLC  236 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHH
Confidence            2345799999999999877664 7899999999999999999999864321   11121 22223345667899999999


Q ss_pred             hcccCCCCCCcCC-----hhhhhcCccccc
Q 012021          244 SKILDPNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       244 ~~~L~~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      .+||+.||.+|||     ++++++||||+.
T Consensus       237 ~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         237 KMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            9999999999999     899999999975


No 106
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00  E-value=8.1e-45  Score=351.83  Aligned_cols=256  Identities=30%  Similarity=0.565  Sum_probs=220.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc--hhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK--VGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      +.|++.+.||+|+||.||.|.+..+++.||+|.+.......  ......+.+|+.+++.++||||+++++++.++...|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46999999999999999999999999999999987543221  1234678899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |+||++|++|.+.+.. +.+++..+..++.|++.||.|||+.|++||||+|+||+++.+++++|+|||++..........
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            9999999999998865 678999999999999999999999999999999999999999999999999987543322111


Q ss_pred             -ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHHHH
Q 012021          167 -LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       167 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~li  243 (472)
                       ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...+......++...  ...+|..+++++.++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGY-GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFL  240 (263)
T ss_pred             ccccCCCcCccccCcceeccCCC-CchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHH
Confidence             1134568899999999987664 48999999999999999999999887666555554433  3456777899999999


Q ss_pred             hcccCCCCCCcCChhhhhcCccc
Q 012021          244 SKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .+||..+|.+|||+.++++||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999999997


No 107
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00  E-value=6.9e-45  Score=357.55  Aligned_cols=250  Identities=29%  Similarity=0.461  Sum_probs=205.3

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc---CCCCeeeEEEEEEe-----C
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV---RHPNVVELYEVMAS-----K   82 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~-----~   82 (472)
                      +|++.+.||+|+||+||+|++..+|+.||+|.+....... .....+.+|+.+++.+   +||||+++++++..     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            6999999999999999999999999999999987543221 2233456778777665   69999999999854     3


Q ss_pred             CEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                      ..++++|||+.+ +|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            568999999975 78777754   35899999999999999999999999999999999999999999999999998765


Q ss_pred             hcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-----------
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-----------  228 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-----------  228 (472)
                      ....   ......||+.|+|||++.+..+. .++|||||||++|+|++|..||..........++....           
T Consensus       159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07863         159 SCQM---ALTPVVVTLWYRAPEVLLQSTYA-TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  234 (288)
T ss_pred             cCcc---cCCCccccccccCchHhhCCCCC-CcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence            4322   12345789999999999776654 89999999999999999999998776655444432200           


Q ss_pred             C----------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 F----------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ~----------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .                .+.+.++.++.++|.+||+.||++|||+.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0                0112367789999999999999999999999999998


No 108
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00  E-value=5.1e-45  Score=367.73  Aligned_cols=254  Identities=24%  Similarity=0.429  Sum_probs=206.8

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVM   79 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~   79 (472)
                      .+-.++|++++.||+|+||.||+|.+.     .++..||+|++.....  ......+.+|+.+++.+ +||||+++++++
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT--ASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc--hHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            455679999999999999999999753     3567899999865432  23446788999999999 899999999988


Q ss_pred             EeC-CEEEEEEEecCCCcccchhcc-------------------------------------------------------
Q 012021           80 ASK-TKIYFVMEYVKGGELFGKVAK-------------------------------------------------------  103 (472)
Q Consensus        80 ~~~-~~~~lV~E~~~gg~L~~~i~~-------------------------------------------------------  103 (472)
                      ... ..+|+||||+++|+|.+++..                                                       
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T cd05102          81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP  160 (338)
T ss_pred             cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence            654 468999999999999888753                                                       


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCC
Q 012021          104 --------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTP  175 (472)
Q Consensus       104 --------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~  175 (472)
                              ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++................+++
T Consensus       161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~  240 (338)
T cd05102         161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL  240 (338)
T ss_pred             hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence                    237788899999999999999999999999999999999999999999999987653222111122345678


Q ss_pred             cccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH-HHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCCC
Q 012021          176 AYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME-MYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNPN  252 (472)
Q Consensus       176 ~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~-~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~  252 (472)
                      .|+|||++.+..+. .++|||||||++|+|++ |..||.+..... ....+..+ ....|..+++++.++|.+||..||.
T Consensus       241 ~y~aPE~~~~~~~~-~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~  319 (338)
T cd05102         241 KWMAPESIFDKVYT-TQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPK  319 (338)
T ss_pred             cccCcHHhhcCCCC-cccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence            89999999777665 89999999999999997 999998755433 33333333 3455667899999999999999999


Q ss_pred             CcCChhhhhc
Q 012021          253 TRISMTKIME  262 (472)
Q Consensus       253 ~Rpt~~eil~  262 (472)
                      +|||+.++++
T Consensus       320 ~RPs~~el~~  329 (338)
T cd05102         320 ERPTFSALVE  329 (338)
T ss_pred             hCcCHHHHHH
Confidence            9999999986


No 109
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00  E-value=7e-45  Score=369.48  Aligned_cols=256  Identities=27%  Similarity=0.450  Sum_probs=210.1

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK----   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   82 (472)
                      .+.++|++++.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence            567899999999999999999999999999999999875432 223456778999999999999999999998543    


Q ss_pred             --CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 --TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 --~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                        ...|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        93 ~~~~~~lv~e~~~~-~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          93 EFQDVYLVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             ccceeEEEhhhhcc-cHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence              357999999976 5555553 358999999999999999999999999999999999999999999999999987643


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------  227 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------  227 (472)
                      ..   .......||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+....+..+...             
T Consensus       171 ~~---~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (355)
T cd07874         171 TS---FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_pred             Cc---cccCCccccCCccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc
Confidence            32   123456799999999999877765 7899999999999999999999877654433222110             


Q ss_pred             ---------C-----CC---------------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---------E-----FK---------------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---------~-----~~---------------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                               .     ..               .+...+.++++||.+||..||++|||+.|+++||||...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence                     0     00               011135678999999999999999999999999999753


No 110
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00  E-value=9.1e-46  Score=364.09  Aligned_cols=258  Identities=29%  Similarity=0.508  Sum_probs=230.8

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +-.+-|+.-+.||+|+||+||-++-+.||+.+|+|.+++..+.+..-.....+|-.||.+++.+.||.+-..|++++.++
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            34567889999999999999999999999999999999888766555566789999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-C--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK-G--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      +||..++||+|.-.|.+ |  .++|..++.|+.+|+.||++||+++|++||+||+|||||+.|+++|+|+|||..+....
T Consensus       262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~  341 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK  341 (591)
T ss_pred             EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence            99999999999777755 4  79999999999999999999999999999999999999999999999999998765433


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc----HHHHHHHHhccCCCCCCCCCHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN----LMEMYRKIGKAEFKFPNWFAPEV  239 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~----~~~~~~~i~~~~~~~~~~~s~~l  239 (472)
                      .   ....+||.+|||||++.+..|+ ...|.|||||++|+|+.|+.||....    ..+.-+.+......+|..+|+++
T Consensus       342 ~---~~~rvGT~GYMAPEvl~ne~Y~-~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~ea  417 (591)
T KOG0986|consen  342 P---IRGRVGTVGYMAPEVLQNEVYD-FSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEA  417 (591)
T ss_pred             c---cccccCcccccCHHHHcCCccc-CCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHH
Confidence            2   3455999999999999888875 89999999999999999999997643    33556667777888999999999


Q ss_pred             HHHHhcccCCCCCCcCC-----hhhhhcCccccc
Q 012021          240 RRLLSKILDPNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      +++.+.+|..||++|..     ++++.+||||+.
T Consensus       418 kslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  418 KSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            99999999999999985     569999999986


No 111
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00  E-value=1.3e-44  Score=354.86  Aligned_cols=247  Identities=29%  Similarity=0.465  Sum_probs=207.4

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||+|+||+||++++..+|+.||+|.+.............+..|+.+++.++||||+++++++.++..+|+||||++|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999999999999999999765443323334566799999999999999999999999999999999999999


Q ss_pred             cchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           98 FGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        98 ~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      .+.+..   ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......   ......||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~  157 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGT  157 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCC
Confidence            887743   358999999999999999999999999999999999999999999999999987654321   12345799


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhccCCCCC-CCCCHHHHHHHhcccCC
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKAEFKFP-NWFAPEVRRLLSKILDP  249 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~~~~~~-~~~s~~l~~li~~~L~~  249 (472)
                      +.|+|||++.+..+ +.++|||||||++|+|++|..||.....    ..............+ ..+++++.++|++||+.
T Consensus       158 ~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  236 (277)
T cd05607         158 NGYMAPEILKEEPY-SYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAK  236 (277)
T ss_pred             CCccCHHHHccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhcc
Confidence            99999999987775 4899999999999999999999976432    233333333333332 35899999999999999


Q ss_pred             CCCCcCCh----hhhhcCccccc
Q 012021          250 NPNTRISM----TKIMENSWFRK  268 (472)
Q Consensus       250 dP~~Rpt~----~eil~h~~f~~  268 (472)
                      ||.+||++    ++++.||||+.
T Consensus       237 ~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         237 KPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             CHhhCCCCccchhhhhcChhhcC
Confidence            99999999    66789999975


No 112
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00  E-value=2.1e-44  Score=354.75  Aligned_cols=255  Identities=26%  Similarity=0.451  Sum_probs=219.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|+..+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+.+|+.++|+||+.+++++..++..|++||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            48899999999999999999999999999999977654443444567889999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+.+++|.+.+..   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......   .
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~  157 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---S  157 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---c
Confidence            9999999877743   369999999999999999999999999999999999999999999999999886543211   1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHH----HHHHhccCCCCCCCCCHHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEM----YRKIGKAEFKFPNWFAPEVRRLL  243 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~s~~l~~li  243 (472)
                      .....|++.|+|||.+.+..+. .++|+||||+++|+|++|..||........    ...+......++..+++++.+|+
T Consensus       158 ~~~~~g~~~~~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (285)
T cd05632         158 IRGRVGTVGYMAPEVLNNQRYT-LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSIC  236 (285)
T ss_pred             ccCCCCCcCccChHHhcCCCCC-cccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHH
Confidence            2345799999999999776654 789999999999999999999987655332    23334444556677899999999


Q ss_pred             hcccCCCCCCcCC-----hhhhhcCcccccC
Q 012021          244 SKILDPNPNTRIS-----MTKIMENSWFRKG  269 (472)
Q Consensus       244 ~~~L~~dP~~Rpt-----~~eil~h~~f~~~  269 (472)
                      .+||+.||++|||     +.++++|+||+..
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            9999999999999     8899999999863


No 113
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00  E-value=1.8e-44  Score=357.69  Aligned_cols=256  Identities=29%  Similarity=0.476  Sum_probs=214.3

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -.++|++.+.||.|+||.||+|.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++++..++..|+
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence            467899999999999999999999999999999998754322  223457789999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||+. ++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......  
T Consensus        82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--  158 (301)
T cd07873          82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--  158 (301)
T ss_pred             EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence            999997 478777754  468999999999999999999999999999999999999999999999999987543221  


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------  227 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------  227 (472)
                      .......+++.|+|||++.+....+.++|||||||++|+|++|++||...+..+....+...                  
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (301)
T cd07873         159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF  238 (301)
T ss_pred             CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence            12234567899999999876655568999999999999999999999887665444332210                  


Q ss_pred             -CCCCC-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          228 -EFKFP-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       228 -~~~~~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                       ....|           ..+++++++||.+||..||.+|||++++++||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence             01111           246888999999999999999999999999999975


No 114
>PTZ00284 protein kinase; Provisional
Probab=100.00  E-value=6.8e-45  Score=383.24  Aligned_cols=252  Identities=25%  Similarity=0.375  Sum_probs=203.1

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC------CCeeeEEEEEEe
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH------PNVVELYEVMAS   81 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h------pnIv~l~~~~~~   81 (472)
                      ..++|++++.||+|+||+||+|.+..+++.||||+++...    ........|+.+++.++|      ++++++++++..
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3578999999999999999999999999999999996432    223456678888877754      458999999876


Q ss_pred             C-CEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCC------------
Q 012021           82 K-TKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHG------------  146 (472)
Q Consensus        82 ~-~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g------------  146 (472)
                      + .++|+|||++ |++|.+++.+ +.+++..++.++.||+.||.|||+ .||+||||||+|||++.++            
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~  281 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP  281 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence            5 5789999988 7788887754 689999999999999999999998 5999999999999998766            


Q ss_pred             ----CEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHH
Q 012021          147 ----NLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYR  222 (472)
Q Consensus       147 ----~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~  222 (472)
                          .+||+|||++.....     .....+||+.|+|||++.+..|. .++|||||||++|+|++|++||...+..+...
T Consensus       282 ~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvil~elltG~~pf~~~~~~~~~~  355 (467)
T PTZ00284        282 PDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWM-YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH  355 (467)
T ss_pred             CCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                499999998753221     12456899999999999887775 78999999999999999999998776554433


Q ss_pred             HHhccCCCCC----------------------------C--------------CCCHHHHHHHhcccCCCCCCcCChhhh
Q 012021          223 KIGKAEFKFP----------------------------N--------------WFAPEVRRLLSKILDPNPNTRISMTKI  260 (472)
Q Consensus       223 ~i~~~~~~~~----------------------------~--------------~~s~~l~~li~~~L~~dP~~Rpt~~ei  260 (472)
                      .+......+|                            .              ..++.+.+||.+||..||.+|||++|+
T Consensus       356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~  435 (467)
T PTZ00284        356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM  435 (467)
T ss_pred             HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence            3321110000                            0              013567799999999999999999999


Q ss_pred             hcCcccccCC
Q 012021          261 MENSWFRKGL  270 (472)
Q Consensus       261 l~h~~f~~~~  270 (472)
                      |+||||.+..
T Consensus       436 L~Hp~~~~~~  445 (467)
T PTZ00284        436 TTHPYVLKYY  445 (467)
T ss_pred             hcCccccccC
Confidence            9999998743


No 115
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00  E-value=1.4e-45  Score=356.56  Aligned_cols=251  Identities=33%  Similarity=0.534  Sum_probs=213.3

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT----   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----   83 (472)
                      ..=+|+-.+.+|.|+||.||.|....+++.||||.+-.++..+       .+|+.+|+.++|||||+|..+|....    
T Consensus        22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence            3447999999999999999999999999999999986665433       38999999999999999999984332    


Q ss_pred             -EEEEEEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC-CCEEEeeccch
Q 012021           84 -KIYFVMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH-GNLKVSDFGLS  156 (472)
Q Consensus        84 -~~~lV~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~-g~vkl~DFGla  156 (472)
                       ...+||||++. +|.+.++     +.+++.-.++-|.+||++||.|||+.||+||||||.|||+|.+ |.+||||||.|
T Consensus        95 ~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   95 VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence             34589999954 8888887     4679999999999999999999999999999999999999976 89999999999


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc----------
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK----------  226 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~----------  226 (472)
                      +....+..+   .+...|..|+|||.+.+...++.+.||||.||++.||+-|++-|.+.+..++...|.+          
T Consensus       174 K~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I  250 (364)
T KOG0658|consen  174 KVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI  250 (364)
T ss_pred             eeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            987655443   4567799999999998887777999999999999999999999999877665554431          


Q ss_pred             -------cCCC------------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          227 -------AEFK------------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       227 -------~~~~------------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                             .+..            +....++++.+|+.++|..+|.+|.++.|++.||||..-
T Consensus       251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence                   0111            122368999999999999999999999999999999864


No 116
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=1.3e-44  Score=368.76  Aligned_cols=255  Identities=28%  Similarity=0.440  Sum_probs=210.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK----   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   82 (472)
                      .+.++|++++.||+|+||.||.|.+..+++.||||++...... ......+.+|+.+++.++||||+++++++...    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence            4578999999999999999999999999999999999754322 23446778999999999999999999987543    


Q ss_pred             --CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 --TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 --~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                        ..+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       100 ~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         100 EFQDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             ccCeEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence              468999999965 5666554 358899999999999999999999999999999999999999999999999987653


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE------------  228 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~------------  228 (472)
                      ..   .......||+.|+|||++.+..+. .++|||||||++|+|++|..||...+..+.+.++....            
T Consensus       178 ~~---~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (364)
T cd07875         178 TS---FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ  253 (364)
T ss_pred             CC---CcccCCcccCCcCCHHHHhCCCCC-chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence            32   123456799999999999887765 78999999999999999999998877655544442210            


Q ss_pred             ----------CC--------------------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          229 ----------FK--------------------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       229 ----------~~--------------------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                ..                    .....+.++++||.+||..||.+|||+.++++||||..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                      00                    00113467899999999999999999999999999974


No 117
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00  E-value=7.1e-44  Score=344.05  Aligned_cols=252  Identities=26%  Similarity=0.537  Sum_probs=218.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-KTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~lV~   89 (472)
                      +|++++.||.|++|.||++.+..+++.||+|.+...... ....+.+.+|+.+++.++|||++++++.+.. +..+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            599999999999999999999999999999999765432 2345678899999999999999999998864 45789999


Q ss_pred             EecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           90 EYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        90 E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      ||+++++|.+++..   ..+++.+++.++.|++.|+.|||++|++||||||+||+++.++.++|+|||++.......  .
T Consensus        80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~  157 (257)
T cd08223          80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--D  157 (257)
T ss_pred             cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC--C
Confidence            99999999988864   358999999999999999999999999999999999999999999999999987654322  2


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhc
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSK  245 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~  245 (472)
                      ......|++.|+|||++.+..+. .++|+||||+++++|++|..||...+.......+..+.. ..+..+++++.++|.+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  236 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYN-YKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIAT  236 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHH
Confidence            23456789999999998776654 789999999999999999999988777666555555443 4566789999999999


Q ss_pred             ccCCCCCCcCChhhhhcCccc
Q 012021          246 ILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ||++||.+|||+.+++.||||
T Consensus       237 ~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         237 MLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HhccCcccCCCHHHHhcCCCC
Confidence            999999999999999999997


No 118
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00  E-value=5.4e-44  Score=347.13  Aligned_cols=255  Identities=29%  Similarity=0.578  Sum_probs=219.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc------hhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK------VGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      +|.++..||.|+||.||+|.+..+++.||+|.+.......      ....+.+.+|+.+++.++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            6899999999999999999999999999999986543321      2344678899999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           85 IYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      .++||||+++++|.+++.. +.+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            9999999999999999876 679999999999999999999999999999999999999999999999999987665321


Q ss_pred             CC----CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHH
Q 012021          164 QD----GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPE  238 (472)
Q Consensus       164 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~  238 (472)
                      ..    .......|++.|+|||.+.+..+. .++|+||||+++|+|++|..||...+....+.++... ...+|..++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYT-RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSE  239 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCC-chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHH
Confidence            11    111234688999999998776654 7899999999999999999999887665555444433 34566778999


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +.++|.+||++||.+||++.+|++||||
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            9999999999999999999999999997


No 119
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=8.9e-46  Score=396.47  Aligned_cols=259  Identities=32%  Similarity=0.568  Sum_probs=230.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .+.|+|++.||+|+||.|.+++.+.|++.||+|++++-...+......++.|-.||.--+.+=|++++..|.++.++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            46899999999999999999999999999999999874433334456789999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |||++||+|..++.+ ++++|+.++.|+..|+.||+.+|+.|+|||||||+|||||.+|++||+|||.+......+. -.
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~-V~  232 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT-VR  232 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc-EE
Confidence            999999999999987 5799999999999999999999999999999999999999999999999998776553222 22


Q ss_pred             cccccCCCcccChhhhcc----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCC--CCCCHHH
Q 012021          168 LHTTCGTPAYVAPEVINR----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFP--NWFAPEV  239 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~--~~~s~~l  239 (472)
                      ....+|||.|++||++..    .+.+|..+|.||+||++|||+.|..||...+..+.|.+|..-  .+.||  ..+|+++
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeea  312 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEA  312 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHH
Confidence            356789999999999853    355678999999999999999999999999999999999764  67888  4589999


Q ss_pred             HHHHhcccCCCCCCcCC---hhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRIS---MTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt---~~eil~h~~f~~~  269 (472)
                      ++||.+++. +|..|..   +++|..||||...
T Consensus       313 kdLI~~ll~-~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  313 KDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             HHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence            999999876 5788888   9999999999863


No 120
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00  E-value=7.7e-44  Score=355.43  Aligned_cols=258  Identities=34%  Similarity=0.608  Sum_probs=225.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.+...+..|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            47999999999999999999999999999999998776544345677899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC-
Q 012021           90 EYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD-  165 (472)
Q Consensus        90 E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~-  165 (472)
                      ||+.|++|.+++..   ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......... 
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            99999999998864   46999999999999999999999999999999999999999999999999998754321110 


Q ss_pred             --------------------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH
Q 012021          166 --------------------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME  219 (472)
Q Consensus       166 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~  219 (472)
                                                .......||..|+|||++.+..+ +.++||||||+++|+|++|..||...+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCC-CchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence                                      01123468999999999987765 479999999999999999999999888777


Q ss_pred             HHHHHhccCCCCCCC--CCHHHHHHHhcccCCCCCCcCC----hhhhhcCccccc
Q 012021          220 MYRKIGKAEFKFPNW--FAPEVRRLLSKILDPNPNTRIS----MTKIMENSWFRK  268 (472)
Q Consensus       220 ~~~~i~~~~~~~~~~--~s~~l~~li~~~L~~dP~~Rpt----~~eil~h~~f~~  268 (472)
                      .+..+......++..  +++++.++|.+||..||++|||    ++++++||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         240 TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            777776666555554  6899999999999999999999    999999999986


No 121
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=8.7e-44  Score=352.47  Aligned_cols=255  Identities=29%  Similarity=0.517  Sum_probs=220.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ..+|++.+.||+|+||.||++.+..+++.||+|.+......   ..+.+.+|+.+++.++||||+++++.+......|+|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            46999999999999999999999999999999998765432   246788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |||++|++|.+++..+.+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......  ...
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~~~  173 (296)
T cd06654          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKR  173 (296)
T ss_pred             ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc--ccc
Confidence            999999999999988889999999999999999999999999999999999999999999999999987643322  112


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---CCCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---EFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~s~~l~~li~~  245 (472)
                      ....|++.|+|||.+.+..+ +.++|||||||++|+|++|+.||...+.......+...   ....+..+++.+.++|.+
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (296)
T ss_pred             CcccCCccccCHHHHcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHH
Confidence            34578999999999877655 48999999999999999999999877654333223222   223455688999999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ||..+|++|||+.+|++||||...
T Consensus       253 ~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         253 CLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             HCcCCcccCcCHHHHhhChhhhcc
Confidence            999999999999999999999763


No 122
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00  E-value=6.4e-44  Score=349.89  Aligned_cols=252  Identities=31%  Similarity=0.475  Sum_probs=208.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++++.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++++.++..+|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence            589999999999999999999999999999998654322 2334678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           91 YVKGGELFGKVAK----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        91 ~~~gg~L~~~i~~----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |+. ++|.+++..    +.+++..++.++.||+.||.|||++|++||||||+|||++.+|.++|+|||++.......  .
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~  156 (285)
T cd07861          80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--R  156 (285)
T ss_pred             cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc--c
Confidence            997 477776643    468999999999999999999999999999999999999999999999999987543221  1


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------C
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------E  228 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------~  228 (472)
                      ......+++.|+|||++.+....+.++|||||||++|+|++|..||...........+...                  .
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK  236 (285)
T ss_pred             cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence            2234467899999999876554457899999999999999999999876543222211100                  0


Q ss_pred             -----------CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 -----------FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 -----------~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                 ......+++++.++|.+||+.||.+|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                       00122368899999999999999999999999999998


No 123
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=4.2e-44  Score=369.01  Aligned_cols=254  Identities=26%  Similarity=0.413  Sum_probs=208.5

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcC--CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLK--TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      +.++..+|++++.||+|+||.||+|....  ++..||+|.+....        ...+|+.+|+.++||||+++++++...
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~  158 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWK  158 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeC
Confidence            45667789999999999999999997643  56889999986542        346899999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ...|+|||++. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus       159 ~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        159 STVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             CEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            99999999995 578787754 6899999999999999999999999999999999999999999999999999876544


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH---HHHHHHHhc----c-------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL---MEMYRKIGK----A-------  227 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~---~~~~~~i~~----~-------  227 (472)
                      ...........||+.|+|||++.+..+. .++|||||||++|+|++|..||.+...   ...+..+.+    .       
T Consensus       238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~  316 (392)
T PHA03207        238 HPDTPQCYGWSGTLETNSPELLALDPYC-AKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN  316 (392)
T ss_pred             ccccccccccccccCccCHhHhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence            3222223356799999999999877765 789999999999999999999976431   111111110    0       


Q ss_pred             ------------------CCCCCC-----CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          228 ------------------EFKFPN-----WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       228 ------------------~~~~~~-----~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                        .+..|.     .++.++.++|.+||..||++|||+.+++.||||.+
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence                              011111     24668899999999999999999999999999976


No 124
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00  E-value=9.5e-44  Score=354.17  Aligned_cols=253  Identities=27%  Similarity=0.483  Sum_probs=214.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....  .......+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   78 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM   78 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence            47999999999999999999999999999999986542  2334567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||++|++|.+++.. +.+++..+..++.||+.||.|||+ .|++||||||+|||++.++.++|+|||++......    .
T Consensus        79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----~  154 (308)
T cd06615          79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----M  154 (308)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----c
Confidence            99999999999865 679999999999999999999998 59999999999999999999999999988654322    1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--------------------
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--------------------  227 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--------------------  227 (472)
                      ....+|++.|+|||.+.+..+ +.++|+||||+++|+|++|..||...+.......+...                    
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHY-TVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             cccCCCCcCccChhHhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence            245678999999999876655 47899999999999999999999765543333222111                    


Q ss_pred             -----------------CCCCCC-CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 -----------------EFKFPN-WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 -----------------~~~~~~-~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                       ....|. .+++++.++|.+||..||++|||+.++++||||...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                             111111 267889999999999999999999999999999763


No 125
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00  E-value=4.2e-44  Score=346.40  Aligned_cols=252  Identities=30%  Similarity=0.614  Sum_probs=223.3

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.++++++||||+++++++.+....|+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            59999999999999999999999999999999987665444566889999999999999999999999999999999999


Q ss_pred             ecCCCcccchhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           91 YVKGGELFGKVAKG-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        91 ~~~gg~L~~~i~~~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      |+.|++|.+++... .+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||++.......   ...
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~  157 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTT  157 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---ccc
Confidence            99999999999764 89999999999999999999999999999999999999999999999999987654322   234


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc---HHHHHHHHhccCCCCCCCCCHHHHHHHhcc
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN---LMEMYRKIGKAEFKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~---~~~~~~~i~~~~~~~~~~~s~~l~~li~~~  246 (472)
                      ...|+..|+|||.+....+ +.++|+||||+++|+|++|..||...+   ...............|..++.++.++|.+|
T Consensus       158 ~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGY-SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKL  236 (258)
T ss_pred             ccCCChhhcCHHHHcccCC-CCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHH
Confidence            5678999999999977664 489999999999999999999998766   334433333356677788899999999999


Q ss_pred             cCCCCCCcCCh--hhhhcCccc
Q 012021          247 LDPNPNTRISM--TKIMENSWF  266 (472)
Q Consensus       247 L~~dP~~Rpt~--~eil~h~~f  266 (472)
                      |..||.+||+.  +++++||||
T Consensus       237 l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         237 LERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ccCChhHcCCccHHHHhcCCCC
Confidence            99999999999  999999998


No 126
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=1.7e-43  Score=350.54  Aligned_cols=255  Identities=29%  Similarity=0.528  Sum_probs=221.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|++.+.||.|+||.||+|.+..+|+.||+|.+.....   ...+.+.+|+.+++.++||||+++++++.....+|+|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            579999999999999999999999999999999875432   23467889999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      ||+.+++|..++..+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........  ...
T Consensus        96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~  173 (296)
T cd06655          96 EYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--KRS  173 (296)
T ss_pred             EecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--cCC
Confidence            999999999999888899999999999999999999999999999999999999999999999999875443221  123


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---CCCCCCCCCHHHHHHHhcc
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---EFKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~s~~l~~li~~~  246 (472)
                      ...|++.|+|||.+.+..+. .++|||||||++|+|++|..||...+.......+...   ....+..+++.+.++|.+|
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (296)
T cd06655         174 TMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRC  252 (296)
T ss_pred             CcCCCccccCcchhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHH
Confidence            45789999999998776654 7899999999999999999999887765444444322   2334556889999999999


Q ss_pred             cCCCCCCcCChhhhhcCcccccCC
Q 012021          247 LDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      |..||.+|||+.+|+.||||+...
T Consensus       253 l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         253 LEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             hhcChhhCCCHHHHhhChHhhhcc
Confidence            999999999999999999998643


No 127
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=3.4e-45  Score=346.41  Aligned_cols=256  Identities=31%  Similarity=0.645  Sum_probs=220.3

Q ss_pred             eEE-EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEE
Q 012021           12 YEL-GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        12 y~i-~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      |.+ .+.||+|+|+.|--+.+..+|..+|||++++..   .....++.+|++++...+ |+||++|+++|+++++.|+||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf  155 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF  155 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence            444 378999999999999999999999999998874   245678999999999985 999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC---CEEEeeccchhhhhcc---
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG---NLKVSDFGLSALAESK---  162 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g---~vkl~DFGla~~~~~~---  162 (472)
                      |-+.||+|...|.+ ..++|.++.++.++|+.||+|||.+||.||||||+|||-....   -+|||||.|..-....   
T Consensus       156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~  235 (463)
T KOG0607|consen  156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC  235 (463)
T ss_pred             ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence            99999999888866 6799999999999999999999999999999999999996554   4899999986543221   


Q ss_pred             --cCCCccccccCCCcccChhhhc----ccCCCCCcccchhhhHHHHHHhcCCCCCCCC---------------cHHHHH
Q 012021          163 --HQDGLLHTTCGTPAYVAPEVIN----RRGYDGSKADIWSCGVILYVLLAGYLPFHDS---------------NLMEMY  221 (472)
Q Consensus       163 --~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~---------------~~~~~~  221 (472)
                        .....+.+.||+..|||||+..    ...++..++|.||||||||.||+|++||.+.               =...++
T Consensus       236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF  315 (463)
T KOG0607|consen  236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF  315 (463)
T ss_pred             CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence              1223456789999999999863    2233448999999999999999999999642               134678


Q ss_pred             HHHhccCCCCCCC----CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          222 RKIGKAEFKFPNW----FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       222 ~~i~~~~~~~~~~----~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ..|..+.+.||..    +|.+++++|+.+|..|+..|.++.++++|||++...
T Consensus       316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            8899999999963    899999999999999999999999999999998643


No 128
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=100.00  E-value=2.3e-43  Score=341.85  Aligned_cols=255  Identities=31%  Similarity=0.533  Sum_probs=219.9

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||.|+||+||+|.+..++..+|+|++.......  ....+.+|+.+++.++|+||+++++.+..++..|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   78 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM   78 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence            47999999999999999999999999999999987654322  4578899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           90 EYVKGGELFGKVAK----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        90 E~~~gg~L~~~i~~----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |+++|++|.+++..    +.+++..++.++.||+.||.|||++|++||||+|+||++++++.++|+|||++.........
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~  158 (267)
T cd06610          79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR  158 (267)
T ss_pred             eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence            99999999999864    45899999999999999999999999999999999999999999999999998876543322


Q ss_pred             --CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCC-----CCCCH
Q 012021          166 --GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFP-----NWFAP  237 (472)
Q Consensus       166 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~-----~~~s~  237 (472)
                        .......|++.|+|||.+......+.++|+||||+++++|++|+.||...+....+.++..... .++     ..+++
T Consensus       159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06610         159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK  238 (267)
T ss_pred             cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccH
Confidence              1224457899999999987664456899999999999999999999988776665555544332 121     24678


Q ss_pred             HHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          238 EVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       238 ~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ++.+++.+||..||++|||+.+|+.||||
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         239 SFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999999999998


No 129
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=1e-43  Score=352.15  Aligned_cols=257  Identities=30%  Similarity=0.513  Sum_probs=220.1

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++++.||+|+||.||++.+..+++.||+|.+......   ..+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   94 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   94 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence            47899999999999999999999999999999998754432   236688999999999999999999999999999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |||+++++|.+++.+..+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++........  ..
T Consensus        95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~  172 (297)
T cd06656          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KR  172 (297)
T ss_pred             ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--Cc
Confidence            9999999999999888899999999999999999999999999999999999999999999999999875433221  12


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---CCCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---EFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~s~~l~~li~~  245 (472)
                      ....|++.|+|||.+.+..+ +.++|+|||||++|+|++|..||...+.......+...   ....|..+++.+.++|.+
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~-~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNR  251 (297)
T ss_pred             CcccCCccccCHHHHcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHH
Confidence            34578999999999977665 48899999999999999999999876553332222221   223455678899999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccCCC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      ||..+|++|||+.++++||||+....
T Consensus       252 ~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         252 CLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             HccCChhhCcCHHHHhcCchhccccc
Confidence            99999999999999999999986543


No 130
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00  E-value=2.4e-43  Score=345.75  Aligned_cols=254  Identities=28%  Similarity=0.462  Sum_probs=212.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|++..+|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++......|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence            5899999999999999999999999999999998654321 123356789999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||++++.|..++.. +.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++........  ..
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~  157 (286)
T cd07847          80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--DY  157 (286)
T ss_pred             eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--cc
Confidence            99999888877654 5799999999999999999999999999999999999999999999999999886543321  12


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------------CC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------------EF  229 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------------~~  229 (472)
                      ....++..|+|||.+.+....+.++||||||+++|+|++|..||.+.+..+....+...                   ..
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL  237 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence            33467889999999876554568999999999999999999999876654333222110                   00


Q ss_pred             CCC------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 KFP------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ~~~------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..|            +.++..+.+||.+||+++|++|||+.+++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            001            2357889999999999999999999999999998


No 131
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00  E-value=7.6e-44  Score=355.65  Aligned_cols=246  Identities=28%  Similarity=0.439  Sum_probs=193.7

Q ss_pred             EeeEcccCCeEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CCEEEEEEE
Q 012021           15 GRLLGQGTFAKVHYARNL--KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KTKIYFVME   90 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~lV~E   90 (472)
                      +++||+|+||+||+|++.  .+++.||+|.+.....     ...+.+|+.+|+.++||||+++++++..  +..+|++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence            578999999999999976  4678999999865432     2456789999999999999999999854  567899999


Q ss_pred             ecCCCcccchhcc----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE----cCCCCEEEeeccch
Q 012021           91 YVKGGELFGKVAK----------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL----DEHGNLKVSDFGLS  156 (472)
Q Consensus        91 ~~~gg~L~~~i~~----------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl----d~~g~vkl~DFGla  156 (472)
                      |+.+ +|.+++..          ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            9854 67666531          258999999999999999999999999999999999999    45678999999999


Q ss_pred             hhhhcccC-CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH---------HHHHHHHhc
Q 012021          157 ALAESKHQ-DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL---------MEMYRKIGK  226 (472)
Q Consensus       157 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~---------~~~~~~i~~  226 (472)
                      ........ .......+||+.|+|||++.+....+.++|||||||++|+|++|..||.....         ......+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  239 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence            86543221 12234568899999999998765556899999999999999999999964321         111111100


Q ss_pred             ----------------------------cCCCC----------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          227 ----------------------------AEFKF----------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       227 ----------------------------~~~~~----------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                                  .....          ....++++.+||.+||+.||.+|||++|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                        00000          01134678899999999999999999999999998


No 132
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00  E-value=1.4e-43  Score=345.90  Aligned_cols=256  Identities=32%  Similarity=0.546  Sum_probs=223.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+.....  ......+.+|+.+++.++||||+++++++.++...|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM   78 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence            589999999999999999999999999999999876532  233466889999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      ||+.+++|.+++..+++++..++.++.||+.|+.|||++|++||||+|+||++++++.++|+|||++........  ...
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~  156 (274)
T cd06609          79 EYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRN  156 (274)
T ss_pred             EeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc--ccc
Confidence            999999999999888999999999999999999999999999999999999999999999999999876654321  123


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCC-CCHHHHHHHhccc
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNW-FAPEVRRLLSKIL  247 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~-~s~~l~~li~~~L  247 (472)
                      ...|++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+.......+.... ...+.. +++++.+++.+||
T Consensus       157 ~~~~~~~y~~PE~~~~~~~-~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  235 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSGY-DEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCL  235 (274)
T ss_pred             cccCCccccChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHh
Confidence            4578899999999987765 489999999999999999999998777665555554443 334444 7899999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ..+|++|||++++++||||++..
T Consensus       236 ~~~p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         236 NKDPKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             hCChhhCcCHHHHhhChhhcCCC
Confidence            99999999999999999998643


No 133
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00  E-value=9.4e-44  Score=348.32  Aligned_cols=256  Identities=33%  Similarity=0.499  Sum_probs=220.8

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++++.||.|+||.||++.+..+++.||+|.+....   ....+.+.+|+.+++.++||||+++++++..+...|+|
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL   80 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence            357999999999999999999998899999999986542   23456788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+++++|.+++..  ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++........  
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--  158 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ--  158 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--
Confidence            999999999998865  4699999999999999999999999999999999999999999999999998876543221  


Q ss_pred             ccccccCCCcccChhhhccc----CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---CCCCCCCHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRR----GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---KFPNWFAPEV  239 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~s~~l  239 (472)
                      ......||+.|+|||.+...    ...+.++|+||||+++|+|++|..||...+......++.....   ..|..++.++
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSF  238 (280)
T ss_pred             ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHH
Confidence            12345689999999997532    2234689999999999999999999988877666666665432   3455688999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .++|.+||+.+|.+||++.++++||||.+.
T Consensus       239 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         239 NDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999999764


No 134
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00  E-value=2.4e-43  Score=350.43  Aligned_cols=258  Identities=33%  Similarity=0.644  Sum_probs=221.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            47999999999999999999999999999999997765433345567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC----
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ----  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~----  164 (472)
                      ||++|++|.+++.. +.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........    
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            99999999999865 6799999999999999999999999999999999999999999999999998763211000    


Q ss_pred             ---------CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCC--
Q 012021          165 ---------DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPN--  233 (472)
Q Consensus       165 ---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~--  233 (472)
                               ........|+..|+|||.+....+ +.++|+||||+++|+|++|..||.+....+....+.......|.  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  239 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD  239 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc
Confidence                     001123467889999999877665 48999999999999999999999988777777777665444332  


Q ss_pred             -CCCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          234 -WFAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       234 -~~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                       .+++++.++|.+||..||++||+   +.++++||||..
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence             47899999999999999999998   789999999965


No 135
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00  E-value=3.6e-43  Score=338.61  Aligned_cols=252  Identities=27%  Similarity=0.473  Sum_probs=221.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++.+.||+|+||.||+|.+..+++.|++|.+...... ......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence            488999999999999999999999999999998765433 2445678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |++|++|.+++..   ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........  .
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--~  157 (256)
T cd08529          80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--F  157 (256)
T ss_pred             eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc--h
Confidence            9999999998865   4689999999999999999999999999999999999999999999999999876543221  2


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhcc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~~  246 (472)
                      ....+|++.|+|||++.+..++ .++|+||||+++++|++|..||...+......++..... .++..++.++.++|.+|
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd08529         158 ANTIVGTPYYLSPELCEDKPYN-EKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQC  236 (256)
T ss_pred             hhccccCccccCHHHhcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHH
Confidence            2345789999999999877654 789999999999999999999998887777777666543 34446889999999999


Q ss_pred             cCCCCCCcCChhhhhcCccc
Q 012021          247 LDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f  266 (472)
                      |+.+|++||++.+++.|||+
T Consensus       237 l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         237 LTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             ccCCcccCcCHHHHhhCCCC
Confidence            99999999999999999995


No 136
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00  E-value=2.4e-43  Score=342.44  Aligned_cols=254  Identities=26%  Similarity=0.500  Sum_probs=216.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc---chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL---KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      +|++++.||.|+||+||+|.+ .+|+.+|+|.+......   .......+.+|+.+++.++|+||+++++++.+.+..|+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            589999999999999999986 58899999998754321   12334678999999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc---
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH---  163 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~---  163 (472)
                      +|||++|++|.+++.+ +.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......   
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            9999999999999876 679999999999999999999999999999999999999999999999999987653211   


Q ss_pred             -CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---CCCCCCCCCHHH
Q 012021          164 -QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---EFKFPNWFAPEV  239 (472)
Q Consensus       164 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~s~~l  239 (472)
                       .........|+..|+|||.+.+..+. .++|+||||+++|+|++|..||...+.......+...   ....+..++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGYG-RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAA  238 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCCc-chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHH
Confidence             11122345689999999999776654 7899999999999999999999876655444333332   234666789999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .++|.+||.++|.+|||+.+++.||||
T Consensus       239 ~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         239 IDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999997


No 137
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00  E-value=5.7e-44  Score=350.34  Aligned_cols=252  Identities=29%  Similarity=0.498  Sum_probs=208.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      ||++.+.||.|+||.||+|++..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+.+.+|+|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence            69999999999999999999999999999999975432 22334567789999999999999999999999999999999


Q ss_pred             ecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |+.+ +|.+++.  .+.+++..++.++.||+.||.|||++||+||||||+||+++.+++++|+|||++.......  ...
T Consensus        80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~  156 (284)
T cd07839          80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--RCY  156 (284)
T ss_pred             cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--CCc
Confidence            9975 6766664  3679999999999999999999999999999999999999999999999999987554321  122


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCC-CCcHHHHHHHHhccC-------------------
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFH-DSNLMEMYRKIGKAE-------------------  228 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~-~~~~~~~~~~i~~~~-------------------  228 (472)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|..||. ..+..+.+..+.+..                   
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07839         157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP  236 (284)
T ss_pred             CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence            345678999999998776555689999999999999999988854 444334333332100                   


Q ss_pred             C----------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 F----------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ~----------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +          ...+.++++++++|.+||..||.+|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            0          0112367899999999999999999999999999998


No 138
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00  E-value=1.1e-43  Score=356.72  Aligned_cols=255  Identities=24%  Similarity=0.414  Sum_probs=206.8

Q ss_pred             EEEeeEccc--CCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           13 ELGRLLGQG--TFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        13 ~i~~~LG~G--~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +++++||+|  +||+||++.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   79 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS   79 (327)
T ss_pred             ChhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence            357889999  7899999999999999999999765432 2445678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC---
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ---  164 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~---  164 (472)
                      |+++|+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+........   
T Consensus        80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence            9999999998854   4599999999999999999999999999999999999999999999999986543221111   


Q ss_pred             --CCccccccCCCcccChhhhccc-CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-----------
Q 012021          165 --DGLLHTTCGTPAYVAPEVINRR-GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-----------  230 (472)
Q Consensus       165 --~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-----------  230 (472)
                        ........++..|+|||++.+. ...+.++|||||||++|+|++|..||..............+...           
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE  239 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence              0111234577889999998753 22347899999999999999999999875543332222211100           


Q ss_pred             -----------------------------------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          231 -----------------------------------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       231 -----------------------------------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                                         ....+++++.+||.+||+.||++|||++++++||||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                                               11124678999999999999999999999999999976


No 139
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=1.5e-43  Score=370.43  Aligned_cols=250  Identities=23%  Similarity=0.339  Sum_probs=204.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ...+|.+.+.||+|+||.||+|.+..+++.||||....         ..+.+|+.+|+.++|||||++++++..++..|+
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l  237 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL  237 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence            45589999999999999999999999999999996422         235689999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |||++. ++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus       238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            999995 578777754  46999999999999999999999999999999999999999999999999998765433222


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC--------cHHHHHHHHhccCC--------
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS--------NLMEMYRKIGKAEF--------  229 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~--------~~~~~~~~i~~~~~--------  229 (472)
                      ......+||+.|+|||++.+..+. .++|||||||++|+|++|..|+...        ....+.+.+.....        
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~-~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~  395 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYT-PSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH  395 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCC-chHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence            222346799999999999877765 8999999999999999987664321        11222222222111        


Q ss_pred             ---------------------CCCC-----CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          230 ---------------------KFPN-----WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       230 ---------------------~~~~-----~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                           ..+.     .+++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                 1111     14568999999999999999999999999999974


No 140
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00  E-value=3.3e-43  Score=339.51  Aligned_cols=252  Identities=29%  Similarity=0.587  Sum_probs=220.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|+||+||++.+..+|+.||+|.+...... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            699999999999999999999999999999998765432 2344678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+.+++|.+.+..   ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++........  .
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~  157 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--L  157 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--h
Confidence            9999999998854   3589999999999999999999999999999999999999999999999999876543221  1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhcc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~~  246 (472)
                      .....|++.|+|||++.+..+ +.++|+|||||++++|++|..||...+..+....+..+.. ..+..++.++.++|.+|
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~-~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  236 (256)
T cd08218         158 ARTCIGTPYYLSPEICENRPY-NNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQL  236 (256)
T ss_pred             hhhccCCccccCHHHhCCCCC-CCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHH
Confidence            223468899999999876655 4789999999999999999999998888777777665554 45667899999999999


Q ss_pred             cCCCCCCcCChhhhhcCccc
Q 012021          247 LDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f  266 (472)
                      |+.+|.+||++.++++||||
T Consensus       237 l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         237 FKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCChhhCcCHHHHhhCcCC
Confidence            99999999999999999997


No 141
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00  E-value=2.1e-43  Score=346.19  Aligned_cols=254  Identities=30%  Similarity=0.501  Sum_probs=215.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++......|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence            699999999999999999999999999999999765432 2345678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |+ +++|.+++..  +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........ ...
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~  157 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLY  157 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-Ccc
Confidence            99 9999998854  5799999999999999999999999999999999999999999999999999886643321 223


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------------CC
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------------EF  229 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------------~~  229 (472)
                      ....|+..|+|||.+.+....+.++||||||+++|+|++|.+||........+..+...                   ..
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence            45678999999999876655568999999999999999999888776655544433211                   00


Q ss_pred             C-----------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          230 K-----------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       230 ~-----------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      .           ..+..+.++.++|.+||..+|++|||++++++||||.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            0           1123568899999999999999999999999999983


No 142
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=1.8e-43  Score=388.57  Aligned_cols=262  Identities=29%  Similarity=0.508  Sum_probs=218.6

Q ss_pred             CcCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-
Q 012021            3 NKGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-   81 (472)
Q Consensus         3 ~~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-   81 (472)
                      ..|.+..++|++++.||.|+||+||+|.+..++..||+|++...... ......+.+|+.+|+.++|||||+++++|.. 
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de   84 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNK   84 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence            45788899999999999999999999999999999999999765433 2345678899999999999999999998854 


Q ss_pred             -CCEEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCcEEEcC----
Q 012021           82 -KTKIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSR-------GVCHRDLKPENLLLDE----  144 (472)
Q Consensus        82 -~~~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~-------giiHrDlKp~NILld~----  144 (472)
                       ...+|+||||+.+++|.+++..     +.+++..++.|+.||+.||.|||+.       +|+||||||+||||+.    
T Consensus        85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~  164 (1021)
T PTZ00266         85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH  164 (1021)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence             4679999999999999998854     5799999999999999999999984       4999999999999964    


Q ss_pred             -------------CCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhccc-CCCCCcccchhhhHHHHHHhcCCC
Q 012021          145 -------------HGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRR-GYDGSKADIWSCGVILYVLLAGYL  210 (472)
Q Consensus       145 -------------~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~~lltG~~  210 (472)
                                   .+.+||+|||++......   ......+||+.|+|||++.+. ...+.++||||||||||+|++|..
T Consensus       165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~  241 (1021)
T PTZ00266        165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT  241 (1021)
T ss_pred             cccccccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                         234899999998765332   123456799999999998643 234578999999999999999999


Q ss_pred             CCCCCcHHH-HHHHHhccCCCCC-CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          211 PFHDSNLME-MYRKIGKAEFKFP-NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       211 Pf~~~~~~~-~~~~i~~~~~~~~-~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ||...+... ....+... ..+| ...++++.+||.+||..+|.+|||+.++|.|+|++..
T Consensus       242 PF~~~~~~~qli~~lk~~-p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        242 PFHKANNFSQLISELKRG-PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             CCCcCCcHHHHHHHHhcC-CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            998765443 33333333 3333 4478999999999999999999999999999999754


No 143
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00  E-value=2.9e-43  Score=345.25  Aligned_cols=250  Identities=24%  Similarity=0.436  Sum_probs=210.8

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....  ......+.+|+.+++.++||||+++++++...+..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   78 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT   78 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence            468999999999999999999999999999999876532  234467889999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      ||+++++|..+   ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++......    ...
T Consensus        79 e~~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----~~~  151 (279)
T cd06619          79 EFMDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAK  151 (279)
T ss_pred             ecCCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----ccc
Confidence            99999988544   46889999999999999999999999999999999999999999999999998755322    224


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH-------HHHHHHHhccC-CCC-CCCCCHHHH
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL-------MEMYRKIGKAE-FKF-PNWFAPEVR  240 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-------~~~~~~i~~~~-~~~-~~~~s~~l~  240 (472)
                      ..+||+.|+|||++.+..+. .++|+||||+++|+|++|..||.....       ......+.... ... ....++++.
T Consensus       152 ~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (279)
T cd06619         152 TYVGTNAYMAPERISGEQYG-IHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFV  230 (279)
T ss_pred             CCCCChhhcCceeecCCCCC-CcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHH
Confidence            56899999999999877654 899999999999999999999965321       12222222221 222 234788999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          241 RLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ++|.+||+.+|.+||+++++++||||+..
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            99999999999999999999999999764


No 144
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00  E-value=3.3e-43  Score=347.03  Aligned_cols=261  Identities=31%  Similarity=0.459  Sum_probs=220.3

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ++-...++|++++.||.|+||.||+|.+..+++.||+|.+....   ......+.+|+.+++.++||||+++++++..++
T Consensus         6 ~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (292)
T cd06644           6 RDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG   82 (292)
T ss_pred             cccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence            44455678999999999999999999999999999999986543   234567889999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      .+|+||||++|++|..++.+  +.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  162 (292)
T cd06644          83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK  162 (292)
T ss_pred             eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence            99999999999999877643  5799999999999999999999999999999999999999999999999998765332


Q ss_pred             ccCCCccccccCCCcccChhhhcccC----CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---CCCCC
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRG----YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---KFPNW  234 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~  234 (472)
                      ...  ......+++.|+|||.+....    ..+.++|+|||||++|+|++|..||...+....+.++.....   ..+..
T Consensus       163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T cd06644         163 TLQ--RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSK  240 (292)
T ss_pred             ccc--ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcc
Confidence            211  123456889999999985321    224689999999999999999999988776665555544322   23456


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ++.++.++|.+||..||++||+++++++||||...
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            78899999999999999999999999999999753


No 145
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00  E-value=4e-43  Score=344.47  Aligned_cols=255  Identities=30%  Similarity=0.489  Sum_probs=217.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      -|++.+.||+|+||+||++.+..++..+|+|.+....   ....+.+.+|+.+++.++||||+++++++..+...|+|||
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e   82 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   82 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence            4788999999999999999999999999999986543   2345678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |+.+++|...+..  +.+++..+..++.||+.||.|||+.|++||||||+|||++.++.++|+|||++.......  ...
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~  160 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRR  160 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc--ccc
Confidence            9999999887753  579999999999999999999999999999999999999999999999999987543221  122


Q ss_pred             ccccCCCcccChhhhcc----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---CCCCCCCCHHHHH
Q 012021          169 HTTCGTPAYVAPEVINR----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---FKFPNWFAPEVRR  241 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~s~~l~~  241 (472)
                      ....|++.|+|||++..    ....+.++|||||||++|+|++|..||...+.......+....   ...|..++.++.+
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd06643         161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKD  240 (282)
T ss_pred             ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHH
Confidence            34578999999999742    1223468999999999999999999998877666555554432   2345568899999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +|.+||..||.+|||++++++||||+...
T Consensus       241 li~~~l~~~p~~Rp~~~~il~~~~~~~~~  269 (282)
T cd06643         241 FLKKCLEKNVDARWTTTQLLQHPFVTVNS  269 (282)
T ss_pred             HHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence            99999999999999999999999998643


No 146
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00  E-value=2.2e-43  Score=343.82  Aligned_cols=253  Identities=27%  Similarity=0.449  Sum_probs=211.8

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEe-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMAS-----   81 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~-----   81 (472)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+.+|+.+++.+ +||||+++++++..     
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence            3578999999999999999999999999999999987543    2235788999999998 69999999999865     


Q ss_pred             -CCEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           82 -KTKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        82 -~~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                       ...+|++|||+.+++|.+++..   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence             3578999999999999998864   368999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcccCCCccccccCCCcccChhhhccc----CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC--CC
Q 012021          158 LAESKHQDGLLHTTCGTPAYVAPEVINRR----GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF--KF  231 (472)
Q Consensus       158 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~--~~  231 (472)
                      ......  .......|++.|+|||++...    ...+.++|||||||++|+|++|..||...........+.....  ..
T Consensus       160 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (272)
T cd06637         160 QLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK  237 (272)
T ss_pred             eccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCC
Confidence            653321  123456799999999998532    1234789999999999999999999987665544444333221  12


Q ss_pred             CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          232 PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       232 ~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +..++.++.+|+.+||..||.+|||+.+++.||||
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         238 SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            33478899999999999999999999999999997


No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=1.9e-43  Score=343.60  Aligned_cols=253  Identities=30%  Similarity=0.470  Sum_probs=212.1

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ..++|++++.||+|+||.||+|.+..+++.||+|++.....   .....+.+|+.+++.++||||+++++++..+..+|+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence            35689999999999999999999999999999999865432   223568899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      ||||+.+++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++........  
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--  161 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--  161 (267)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--
Confidence            9999999999998864 6799999999999999999999999999999999999999999999999999876533211  


Q ss_pred             ccccccCCCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC-----CCCCHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP-----NWFAPEV  239 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~-----~~~s~~l  239 (472)
                      ......|++.|+|||.+...  ...+.++|+||+||++|+|++|..||...........+....+..+     ..++.++
T Consensus       162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF  241 (267)
T ss_pred             ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHH
Confidence            12345789999999987432  2234789999999999999999999976654443333333332222     2367899


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcc
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSW  265 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~  265 (472)
                      .++|++||..+|++|||+++|++|+|
T Consensus       242 ~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         242 HNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            99999999999999999999999987


No 148
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00  E-value=4.6e-43  Score=341.77  Aligned_cols=256  Identities=28%  Similarity=0.525  Sum_probs=214.7

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc-------hhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK-------VGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      +|.+.+.||.|+||.||+|.+..+|+.||+|.+.......       ....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            6999999999999999999999999999999986432111       123456889999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .+++||||+.+++|.+++.. +.+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++......
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999999876 68999999999999999999999999999999999999999999999999998765432


Q ss_pred             cCCCccccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCC----CC
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPN----WF  235 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~----~~  235 (472)
                      ..........|+..|+|||.+.... ..+.++|+||||+++|++++|..||...+.......+...  ...++.    .+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence            2222233456899999999987654 2357899999999999999999999876655444333222  222332    35


Q ss_pred             CHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          236 APEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       236 s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +.++.++|.+||.++|.+|||++++++||||
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            8899999999999999999999999999997


No 149
>PHA02988 hypothetical protein; Provisional
Probab=100.00  E-value=3.6e-43  Score=346.18  Aligned_cols=245  Identities=19%  Similarity=0.263  Sum_probs=210.9

Q ss_pred             CeEEE--eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe----CCE
Q 012021           11 RYELG--RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS----KTK   84 (472)
Q Consensus        11 ~y~i~--~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----~~~   84 (472)
                      .++..  ..||+|++|.||+|..  +|+.||||.+.+.........+.+.+|+.+|++++||||+++++++.+    ...
T Consensus        19 ~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~   96 (283)
T PHA02988         19 DIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPR   96 (283)
T ss_pred             HcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCc
Confidence            34444  6799999999999987  799999999987654444446788899999999999999999999876    457


Q ss_pred             EEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      +++||||++||+|.+++.. +.+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus        97 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~  176 (283)
T PHA02988         97 LSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP  176 (283)
T ss_pred             eEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence            8999999999999999876 5799999999999999999999984 9999999999999999999999999998865332


Q ss_pred             cCCCccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPE  238 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~  238 (472)
                           .....||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+..+.+..+...  .+..|..++++
T Consensus       177 -----~~~~~~~~~y~aPE~~~~~~~~~-~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  250 (283)
T PHA02988        177 -----PFKNVNFMVYFSYKMLNDIFSEY-TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLE  250 (283)
T ss_pred             -----cccccCcccccCHHHhhhccccc-cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHH
Confidence                 134578999999999875  344 58999999999999999999999998887777777443  45566568999


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcC
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.++|.+||+.||++|||++++++.
T Consensus       251 l~~li~~cl~~dp~~Rps~~ell~~  275 (283)
T PHA02988        251 IKCIVEACTSHDSIKRPNIKEILYN  275 (283)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHHHH
Confidence            9999999999999999999999864


No 150
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00  E-value=3.5e-43  Score=340.68  Aligned_cols=247  Identities=38%  Similarity=0.720  Sum_probs=219.1

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+.+++..|++|||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999999999999999876654445567899999999999999999999999999999999999999999


Q ss_pred             cchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCc
Q 012021           98 FGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPA  176 (472)
Q Consensus        98 ~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~  176 (472)
                      .+++.+ ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......   ......|++.
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~  157 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPE  157 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcC
Confidence            999876 568999999999999999999999999999999999999999999999999987654332   1234578999


Q ss_pred             ccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc--HHHHHHHHh--ccCCCCCCCCCHHHHHHHhcccCCCCC
Q 012021          177 YVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN--LMEMYRKIG--KAEFKFPNWFAPEVRRLLSKILDPNPN  252 (472)
Q Consensus       177 y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~--~~~~~~~i~--~~~~~~~~~~s~~l~~li~~~L~~dP~  252 (472)
                      |+|||.+....++ .++|+||||+++|+|++|..||....  ....+.++.  .....+|...++++.++|.+||..+|.
T Consensus       158 ~~~PE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         158 YVAPEIILNKGYD-FSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             ccChhHhcCCCCC-ChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChh
Confidence            9999998776654 78999999999999999999998766  666666666  445677777899999999999999999


Q ss_pred             CcCC-----hhhhhcCccccc
Q 012021          253 TRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       253 ~Rpt-----~~eil~h~~f~~  268 (472)
                      +||+     ++|+++||||+.
T Consensus       237 ~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         237 ERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             hCcCCcccCHHHHhcChhhhC
Confidence            9999     999999999985


No 151
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00  E-value=3.4e-43  Score=345.31  Aligned_cols=248  Identities=30%  Similarity=0.515  Sum_probs=204.5

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHH---hcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMR---LVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~---~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      .||+|+||.||++.+..+++.+|+|.+.+.............+|..+++   ..+||||+.+++++..++..|+||||+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999999999999999997765432222233444544444   4479999999999999999999999999


Q ss_pred             CCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccccc
Q 012021           94 GGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTC  172 (472)
Q Consensus        94 gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~  172 (472)
                      |++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......    .....
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~  156 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV  156 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----ccCcC
Confidence            9999988865 679999999999999999999999999999999999999999999999999986543221    23457


Q ss_pred             CCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc---HHHHHHHHhccCCCCCCCCCHHHHHHHhcccCC
Q 012021          173 GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN---LMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       173 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~---~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~  249 (472)
                      ||+.|+|||.+......+.++||||+||++|+|++|..||....   ..............+|..+++++.++|.+||..
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  236 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQR  236 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcC
Confidence            99999999998643334578999999999999999999997532   222222223345567778999999999999999


Q ss_pred             CCCCcC-----ChhhhhcCccccc
Q 012021          250 NPNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       250 dP~~Rp-----t~~eil~h~~f~~  268 (472)
                      ||.+|+     |++++++||||+.
T Consensus       237 ~p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         237 DVSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             CHHHhcCCCCCCHHHHHhCccccC
Confidence            999999     6999999999976


No 152
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=1.6e-43  Score=343.97  Aligned_cols=252  Identities=29%  Similarity=0.475  Sum_probs=212.0

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.+.....   .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv   84 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC   84 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence            4689999999999999999999999999999999865532   2335678899999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |||+.+++|.+++.. +.+++.+++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......  ..
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~  162 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AK  162 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--cc
Confidence            999999999998864 689999999999999999999999999999999999999999999999999987543221  11


Q ss_pred             cccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC-----CCCCHHHH
Q 012021          168 LHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP-----NWFAPEVR  240 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~-----~~~s~~l~  240 (472)
                      .....|++.|+|||++..  ....+.++|+|||||++|+|++|..||...........+.......+     ..++..+.
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (267)
T cd06645         163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFH  242 (267)
T ss_pred             cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHH
Confidence            234578999999999742  22234789999999999999999999976654443333333332222     23678899


Q ss_pred             HHHhcccCCCCCCcCChhhhhcCcc
Q 012021          241 RLLSKILDPNPNTRISMTKIMENSW  265 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h~~  265 (472)
                      ++|.+||..+|++|||+++|++|||
T Consensus       243 ~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         243 HFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHHHccCCchhCcCHHHHhcCCC
Confidence            9999999999999999999999998


No 153
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00  E-value=1.5e-43  Score=347.50  Aligned_cols=254  Identities=29%  Similarity=0.467  Sum_probs=214.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.+..... ...+.+.+|+.+++.++||||+++++++..+...|+||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence            47999999999999999999999899999999986644322 34567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||++++.|..+... +.+++..++.++.||+.||.|||++|++||||+|+||++++++.++|+|||++.......  ...
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~  157 (286)
T cd07846          80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVY  157 (286)
T ss_pred             ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--ccc
Confidence            99999988877654 469999999999999999999999999999999999999999999999999987654322  223


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-------------------C
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-------------------F  229 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-------------------~  229 (472)
                      ....++..|+|||++.+....+.++||||||+++|+|++|..||......+....+....                   .
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM  237 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence            345688999999998765555688999999999999999999998766544333322100                   0


Q ss_pred             ------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 ------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                  ..++.++..+.+++.+||+.+|.+|||+.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                        0123467889999999999999999999999999998


No 154
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=9e-45  Score=353.03  Aligned_cols=261  Identities=32%  Similarity=0.578  Sum_probs=236.8

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKT   83 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~   83 (472)
                      ..+-...|..+..||.|+||+|-+|..+.+.+.+|||++.+..+.....++--..|-.+|.... -|.+++++.+|.+-+
T Consensus       344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD  423 (683)
T ss_pred             cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence            3455668999999999999999999999999999999999988766555555567888888774 688999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .+|+||||+.||+|.-.|.+ |++.|..+..|+..|+-||-|||++||++||||.+|||||.+|++||+|||++..-.. 
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-  502 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-  502 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc-
Confidence            99999999999999888876 8999999999999999999999999999999999999999999999999999874332 


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRL  242 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~l  242 (472)
                       .+....+.||||.|+|||++...+|. ..+|.||+||+||||++|+.||++.+..++++.|..-+..+|..+|.++.++
T Consensus       503 -~~~TTkTFCGTPdYiAPEIi~YqPYg-ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~i  580 (683)
T KOG0696|consen  503 -DGVTTKTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAI  580 (683)
T ss_pred             -CCcceeeecCCCcccccceEEecccc-cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHH
Confidence             23345789999999999999988875 8899999999999999999999999999999999999999999999999999


Q ss_pred             HhcccCCCCCCcCCh-----hhhhcCccccc
Q 012021          243 LSKILDPNPNTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~-----~eil~h~~f~~  268 (472)
                      ++..|...|.+|...     .+|.+||||+.
T Consensus       581 ckg~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  581 CKGLLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             HHHHhhcCCccccCCCCccccchhhCcchhh
Confidence            999999999999864     58999999985


No 155
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=2e-43  Score=347.09  Aligned_cols=255  Identities=26%  Similarity=0.488  Sum_probs=216.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++++.||+|+||.||+|.+..+|..||+|.+....  .......+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM   78 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence            47999999999999999999999999999999986542  2233467889999999999999999999999999999999


Q ss_pred             EecCCCcccchhccC----CCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           90 EYVKGGELFGKVAKG----KLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~~----~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||++|++|..++..+    .+++..+..++.||+.||.|||+ .||+||||||+||+++.++.++|+|||++......  
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--  156 (286)
T cd06622          79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--  156 (286)
T ss_pred             eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence            999999998888664    79999999999999999999997 59999999999999999999999999998754322  


Q ss_pred             CCccccccCCCcccChhhhcccCC-----CCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHH---Hhcc-CCCCCCCC
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGY-----DGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRK---IGKA-EFKFPNWF  235 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~---i~~~-~~~~~~~~  235 (472)
                        ......|++.|+|||.+.+...     .+.++|+|||||++|+|++|..||........+..   +... ...+|..+
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd06622         157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGY  234 (286)
T ss_pred             --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCccc
Confidence              2244578999999999854432     25789999999999999999999976554443332   3222 34566678


Q ss_pred             CHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          236 APEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       236 s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ++++.++|.+||..+|.+||+++++++||||....
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            99999999999999999999999999999997643


No 156
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=100.00  E-value=3.8e-43  Score=347.13  Aligned_cols=258  Identities=32%  Similarity=0.457  Sum_probs=215.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +|++.+.||+|+||.||+|.+..+|+.||||.+......  .......+..|+.+++.++|+||+++++++.+.+..|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            699999999999999999999999999999999765433  123345677899999999999999999999999999999


Q ss_pred             EEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+ +++|.+++...  .+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......  .
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~  157 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN--R  157 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--c
Confidence            9999 88999998763  59999999999999999999999999999999999999999999999999987654322  1


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-----------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-----------------  229 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-----------------  229 (472)
                      ......+++.|+|||.+.+....+.++|+|||||++|+|++|.+||...+..+.+.++.....                 
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T cd07841         158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV  237 (298)
T ss_pred             cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence            223345788999999986655556899999999999999999888887665554444422100                 


Q ss_pred             -----------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          230 -----------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       230 -----------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                                 ......+.++.++|.+||.+||++|||+.+++.||||++...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence                       001224678999999999999999999999999999987554


No 157
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=100.00  E-value=3.1e-43  Score=341.68  Aligned_cols=256  Identities=26%  Similarity=0.514  Sum_probs=215.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc---chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL---KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      +|+.++.||+|+||.||.+.+..+++.||+|++......   .....+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            589999999999999999999999999999998754321   12345788999999999999999999999999999999


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-CEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-NLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||+.|++|.+++.. +++++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.........
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            9999999999998865 6799999999999999999999999999999999999998876 5999999998765432111


Q ss_pred             --CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHH---h--ccCCCCCCCCCHH
Q 012021          166 --GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKI---G--KAEFKFPNWFAPE  238 (472)
Q Consensus       166 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i---~--~~~~~~~~~~s~~  238 (472)
                        .......||..|+|||.+.+..+. .++|+||||+++++|++|..||...........+   .  ......|..++++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYG-RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG  239 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHH
Confidence              111234688999999998776654 7899999999999999999999754432222222   1  2234566678899


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      +.+++.+||..+|.+|||+.++++||||+
T Consensus       240 ~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         240 LRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999999999985


No 158
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00  E-value=7.8e-43  Score=339.50  Aligned_cols=256  Identities=28%  Similarity=0.515  Sum_probs=215.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CCEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--KVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KTKI   85 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~   85 (472)
                      ..|++.+.||+|+||.||+|.+..++..||+|.+......  .......+.+|+.+++.++||||+++++++..  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            3699999999999999999999999999999998754322  12345678899999999999999999999865  4688


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc-
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH-  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~-  163 (472)
                      |+++||+++++|.+++.. +.+++...+.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....... 
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            999999999999998865 579999999999999999999999999999999999999999999999999987553221 


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--cCCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--AEFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~s~~l~~  241 (472)
                      .........++..|+|||.+.+..++ .++|||||||++|+|++|+.||...........+..  ....+|..+++.+++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYG-RKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD  240 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCC-chhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHH
Confidence            11112335688999999999776654 789999999999999999999987765554444432  234566778899999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCcccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      +| +||..+|++|||+++|++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            99 57778999999999999999996


No 159
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3e-45  Score=371.17  Aligned_cols=254  Identities=30%  Similarity=0.509  Sum_probs=226.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +-|+|+..||.|+||+||+|.++.++-.-|-|+|....   .+.++.+.-||.||..+.||+||+|++.|..+++++++.
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili  108 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI  108 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence            46889999999999999999999999999999986543   456788889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |||.||-....+..  ..|+|.+++-+.+|+++||.|||+++|||||||..|||+.-+|.++|+|||.+.........  
T Consensus       109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk--  186 (1187)
T KOG0579|consen  109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK--  186 (1187)
T ss_pred             eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhh--
Confidence            99999988877754  67999999999999999999999999999999999999999999999999998754332222  


Q ss_pred             cccccCCCcccChhhh-----cccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC---CCCCCCHHH
Q 012021          168 LHTTCGTPAYVAPEVI-----NRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK---FPNWFAPEV  239 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~-----~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~~s~~l  239 (472)
                      -.++.|||+|||||+.     ...+|+ +++||||||++|.+|..+.+|-...+++..+-+|.+..++   -|..++..+
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYD-ykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSF  265 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCch-hhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHH
Confidence            3567999999999986     345676 8999999999999999999999999999988888876653   366789999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .+|+.+||..||..||++++|++||||++.
T Consensus       266 ~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  266 SDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            999999999999999999999999999853


No 160
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00  E-value=5.4e-43  Score=347.63  Aligned_cols=253  Identities=20%  Similarity=0.321  Sum_probs=205.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcC----------------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLK----------------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHP   70 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp   70 (472)
                      +..++|++.+.||+|+||.||+|.+..                ++..||+|++.....  ......+.+|+.+|+.++||
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~   79 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDP   79 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCC
Confidence            346799999999999999999998532                345799999875432  23456788999999999999


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCCCcccchhccC--------------------CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKGGELFGKVAKG--------------------KLKEDAARKYFQQLISAVDYCHSRGV  130 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~--------------------~l~e~~~~~i~~ql~~aL~yLH~~gi  130 (472)
                      ||+++++++.+.+..|+||||+.+++|.+++...                    .+++..++.++.||+.||.|||++||
T Consensus        80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999999999999999998887432                    35778899999999999999999999


Q ss_pred             eecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc--C
Q 012021          131 CHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA--G  208 (472)
Q Consensus       131 iHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt--G  208 (472)
                      +||||||+|||++.++.+||+|||++................++..|+|||++....+ +.++||||||+++|+|++  +
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~~~  238 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF-TTASDVWAFGVTLWEILMLCK  238 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC-CchhhhHHHHHHHHHHHHccC
Confidence            9999999999999999999999999875533221111233456788999999876665 489999999999999986  6


Q ss_pred             CCCCCCCcHHHHHHHHhc--------cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          209 YLPFHDSNLMEMYRKIGK--------AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       209 ~~Pf~~~~~~~~~~~i~~--------~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ..||...+.......+..        .....|+.++..+.++|.+||+.||++|||+.+|.+
T Consensus       239 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         239 EQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            788877665544433321        112345567899999999999999999999999943


No 161
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00  E-value=2.3e-43  Score=344.26  Aligned_cols=256  Identities=34%  Similarity=0.704  Sum_probs=228.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++ ||||+++++++..++..|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47999999999999999999999999999999998765544455577889999999998 99999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC--
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD--  165 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~--  165 (472)
                      |||+.+++|.+++.+ +.+++..++.++.|++.||.|||++|++|+||+|+||+++.+++++|+|||++.........  
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            999999999999976 48999999999999999999999999999999999999999999999999998765433211  


Q ss_pred             ----------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC
Q 012021          166 ----------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF  229 (472)
Q Consensus       166 ----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~  229 (472)
                                      .......|+..|+|||++....+ +.++|+||||++++++++|..||...+....+..+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  239 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY  239 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCC-ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC
Confidence                            11233467899999999876554 4789999999999999999999998887777777777778


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCCh----hhhhcCccc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISM----TKIMENSWF  266 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~----~eil~h~~f  266 (472)
                      .+|..+++.+.++|.+||+.+|.+|||+    .++++||||
T Consensus       240 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         240 SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            8888899999999999999999999999    999999998


No 162
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00  E-value=2.3e-43  Score=361.36  Aligned_cols=254  Identities=23%  Similarity=0.405  Sum_probs=208.0

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCC-----cEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTG-----MSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~   80 (472)
                      +-.++|++++.||+|+||.||+|++..+|     ..||+|++......  .....+.+|+.+++.+ +||||+++++++.
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            34568999999999999999999875444     57999999765422  3356788999999999 8999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhcc---------------------------------------------------------
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK---------------------------------------------------------  103 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~---------------------------------------------------------  103 (472)
                      .....|+||||+.+|+|.+++..                                                         
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            99999999999999999887642                                                         


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021          104 --------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus       104 --------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                                    .++++..+++++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~  272 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG  272 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence                          247888999999999999999999999999999999999999999999999987553322111112


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHHHHhcc
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~li~~~  246 (472)
                      ...+++.|+|||++....+. .++|||||||++|+|++ |..||........+......  ....|..+++++.++|.+|
T Consensus       273 ~~~~~~~y~aPE~~~~~~~~-~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  351 (374)
T cd05106         273 NARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMC  351 (374)
T ss_pred             CCCCccceeCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHH
Confidence            23356689999999776654 89999999999999997 99999876544333333322  3455677899999999999


Q ss_pred             cCCCCCCcCChhhhhcC
Q 012021          247 LDPNPNTRISMTKIMEN  263 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h  263 (472)
                      |+.||.+|||+.++++.
T Consensus       352 l~~dp~~RPs~~~l~~~  368 (374)
T cd05106         352 WNLEPTERPTFSQISQL  368 (374)
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999763


No 163
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00  E-value=1.5e-42  Score=334.82  Aligned_cols=252  Identities=28%  Similarity=0.545  Sum_probs=221.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++++.||.|+||.||.+++..+++.+++|.+....... .....+.+|+.+++.++|+||+++++++.+.+..+++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            6999999999999999999999999999999987654332 445678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+++++|.+++..   ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++........  .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~  157 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--M  157 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--c
Confidence            9999999998865   3689999999999999999999999999999999999999999999999999876543321  2


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-CCCCCCHHHHHHHhcc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-FPNWFAPEVRRLLSKI  246 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-~~~~~s~~l~~li~~~  246 (472)
                      .....|++.|+|||.+.+..+. .++|+||||+++++|++|..||...+..+....+..+.+. .+..++.++.++|.+|
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~-~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYN-FKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSL  236 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCC-CcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHH
Confidence            3456789999999998776654 7899999999999999999999988887777777665443 3455789999999999


Q ss_pred             cCCCCCCcCChhhhhcCccc
Q 012021          247 LDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f  266 (472)
                      |..+|.+||++.++++|+|+
T Consensus       237 l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         237 LQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCcccCCCHHHHhhCcCC
Confidence            99999999999999999986


No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00  E-value=2e-42  Score=341.03  Aligned_cols=254  Identities=28%  Similarity=0.465  Sum_probs=213.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASK----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~----   82 (472)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++....    .....+.+|+.+++.+ +|||++++++++...    
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~   95 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV   95 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence            4678999999999999999999999999999999986543    2235678899999988 799999999998653    


Q ss_pred             -CEEEEEEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           83 -TKIYFVMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                       +..|+||||++|++|.+++.     ...+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~  175 (291)
T cd06639          96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS  175 (291)
T ss_pred             CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence             46899999999999988774     257899999999999999999999999999999999999999999999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCC----CCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---C
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGY----DGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---F  229 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~  229 (472)
                      .........  .....|+..|+|||.+.....    .+.++|||||||++|+|++|+.||...+.......+.+..   .
T Consensus       176 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  253 (291)
T cd06639         176 AQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTL  253 (291)
T ss_pred             hhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCC
Confidence            765432211  234568999999999854321    2578999999999999999999998876655555554432   2


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      ..+..++.++.++|.+||+.+|++||++.+|++||||+
T Consensus       254 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         254 LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            23445778899999999999999999999999999995


No 165
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00  E-value=6.9e-43  Score=341.43  Aligned_cols=256  Identities=29%  Similarity=0.577  Sum_probs=219.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC---CCCeeeEEEEEEeCCEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR---HPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~l   87 (472)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+.....  ......+.+|+.+++.++   |||++++++++..+...|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            58899999999999999999999999999999865432  234567889999999997   9999999999999999999


Q ss_pred             EEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           88 VMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||||++|++|.+++..+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........  .
T Consensus        80 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~  157 (277)
T cd06917          80 IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--K  157 (277)
T ss_pred             EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--c
Confidence            99999999999999888899999999999999999999999999999999999999999999999999876544322  1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCC-CCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNW-FAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~-~s~~l~~li~~  245 (472)
                      .....|+..|+|||.+......+.++|+||||+++|+|++|..||...........+.... ..++.. ++.++.+++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  237 (277)
T cd06917         158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAA  237 (277)
T ss_pred             cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHH
Confidence            2345789999999998655444689999999999999999999998876655544443332 223332 78899999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccCC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ||+.||++|||+.+++.|+||++..
T Consensus       238 ~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         238 CLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HcCCCcccCcCHHHHhhChHhhccc
Confidence            9999999999999999999998754


No 166
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00  E-value=8.3e-43  Score=342.21  Aligned_cols=249  Identities=32%  Similarity=0.517  Sum_probs=207.9

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHH---HHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREI---SVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei---~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      .||+|+||.||+|.+..+++.||+|.+.+..............|.   ..++...||||+++++++...+..|+||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999999999999999999876443222222233343   34455679999999999999999999999999


Q ss_pred             CCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccccc
Q 012021           94 GGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTC  172 (472)
Q Consensus        94 gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~  172 (472)
                      |++|..++.. +.+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......    ....+
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~  156 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV  156 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----CcCcC
Confidence            9999888865 679999999999999999999999999999999999999999999999999987543221    23457


Q ss_pred             CCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC---cHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCC
Q 012021          173 GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS---NLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       173 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~---~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~  249 (472)
                      |+..|+|||.+.+....+.++||||+|+++|+|++|..||...   ........+......+|..+++++.+++.+||..
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~  236 (278)
T cd05606         157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR  236 (278)
T ss_pred             CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhc
Confidence            9999999999875433457899999999999999999999876   3344444444556677777899999999999999


Q ss_pred             CCCCcC-----ChhhhhcCcccccC
Q 012021          250 NPNTRI-----SMTKIMENSWFRKG  269 (472)
Q Consensus       250 dP~~Rp-----t~~eil~h~~f~~~  269 (472)
                      +|.+||     ++.++++||||+..
T Consensus       237 ~p~~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         237 DVNRRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             CHHhccCCCCCCHHHHHhCccccCC
Confidence            999999     99999999999863


No 167
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00  E-value=4.9e-43  Score=343.57  Aligned_cols=253  Identities=25%  Similarity=0.366  Sum_probs=216.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCC-----cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTG-----MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      -.++|++.+.||+|+||.||+|.+...+     ..||+|.+....  .......+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   80 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE   80 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence            3568999999999999999999986655     689999986543  223456789999999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH  145 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~  145 (472)
                      ...|++|||+++++|.+++..                 +.+++..++.++.||+.||.|||++|++||||||+||+++.+
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~  160 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG  160 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence            999999999999999888753                 357889999999999999999999999999999999999999


Q ss_pred             CCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHH
Q 012021          146 GNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKI  224 (472)
Q Consensus       146 g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i  224 (472)
                      +.++|+|||++................+++.|+|||.+....++ .++|||||||++|+|++ |..||.+.+..+....+
T Consensus       161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05048         161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFT-TESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI  239 (283)
T ss_pred             CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCc-hhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999998754332222223345678899999998776654 89999999999999998 99999988887777777


Q ss_pred             hccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          225 GKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       225 ~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .... ...|..+++++.+|+.+||+.||.+|||+.+|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         240 RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            6544 34567789999999999999999999999999875


No 168
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00  E-value=5.5e-43  Score=342.80  Aligned_cols=257  Identities=30%  Similarity=0.504  Sum_probs=221.8

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .+.|+..+.||.|+||.||.|.+..+++.||+|++.....  ......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII   80 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            3578899999999999999999999999999999875532  23457788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |||+.|++|.+++..+++++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++........  ..
T Consensus        81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~  158 (277)
T cd06640          81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KR  158 (277)
T ss_pred             EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--cc
Confidence            9999999999999888999999999999999999999999999999999999999999999999999876543221  12


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhccc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L  247 (472)
                      ....++..|+|||.+.+..+ +.++|+|||||++|+|++|..||...........+... ....+..++.++.++|.+||
T Consensus       159 ~~~~~~~~y~apE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  237 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAY-DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACL  237 (277)
T ss_pred             ccccCcccccCHhHhccCCC-ccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHc
Confidence            33468889999999876665 48999999999999999999999887666555444333 23344557889999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +.+|++||++.+++.|+||.+..
T Consensus       238 ~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06640         238 NKDPSFRPTAKELLKHKFIVKNA  260 (277)
T ss_pred             ccCcccCcCHHHHHhChHhhhcc
Confidence            99999999999999999997643


No 169
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.2e-43  Score=358.00  Aligned_cols=246  Identities=25%  Similarity=0.374  Sum_probs=199.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ..+|++++.||+|+||.||+|.+..+++.||+|+..+..         ...|+.+++.++||||+++++++......|+|
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence            457999999999999999999999999999999854332         34699999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+. ++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......   .
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~  211 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---P  211 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---c
Confidence            99995 577777753  57999999999999999999999999999999999999999999999999998753321   1


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCC-CCCcH----------HHHHHHHh---ccCCCCC
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPF-HDSNL----------MEMYRKIG---KAEFKFP  232 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf-~~~~~----------~~~~~~i~---~~~~~~~  232 (472)
                      ......||+.|+|||++.+..+. .++|||||||++|+|+++..|+ .....          ..+...+.   .....++
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  290 (357)
T PHA03209        212 AFLGLAGTVETNAPEVLARDKYN-SKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP  290 (357)
T ss_pred             ccccccccccccCCeecCCCCCC-chhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence            12345799999999999877765 8999999999999999865554 32111          01111111   0001111


Q ss_pred             ------------------------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 ------------------------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 ------------------------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                                    ..++.++.+||.+||+.||.+|||+.|+++||||++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                          124567788999999999999999999999999975


No 170
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=100.00  E-value=1.3e-42  Score=334.80  Aligned_cols=251  Identities=33%  Similarity=0.581  Sum_probs=219.3

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++.++||||+++++.+..++..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            699999999999999999999999999999999865433 2345788999999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-CEEEeeccchhhhhcccCCC
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-NLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-~vkl~DFGla~~~~~~~~~~  166 (472)
                      |++|++|.+++..   ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.++ .++|+|||++........  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--  157 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK--  157 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc--
Confidence            9999999999865   2489999999999999999999999999999999999998655 579999999876543221  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhc
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~  245 (472)
                       .....|++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+.......+.... ..++..+++++.++|.+
T Consensus       158 -~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  235 (256)
T cd08220         158 -AYTVVGTPCYISPELCEGKPY-NQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILS  235 (256)
T ss_pred             -ccccccCCcccCchhccCCCC-CcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHH
Confidence             234568999999999876654 478999999999999999999998887776666665443 45667789999999999


Q ss_pred             ccCCCCCCcCChhhhhcCccc
Q 012021          246 ILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ||.++|.+|||+.++++||||
T Consensus       236 ~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         236 MLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HccCChhhCCCHHHHhhCCCC
Confidence            999999999999999999996


No 171
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00  E-value=1.9e-42  Score=336.30  Aligned_cols=256  Identities=29%  Similarity=0.532  Sum_probs=214.6

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccc--cchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CCEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKV--LKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KTKI   85 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~   85 (472)
                      ..|++++.||+|+||.||.+.+..+|..||||.+.....  ......+.+.+|+.+++.++||||+++++++.+  ...+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            579999999999999999999999999999999864321  122345688999999999999999999999866  3578


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |++|||++|++|.+++.+ +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            899999999999999865 5789999999999999999999999999999999999999999999999999875532211


Q ss_pred             -CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHH
Q 012021          165 -DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRR  241 (472)
Q Consensus       165 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~  241 (472)
                       ........|+..|+|||++.+..+ +.++||||||+++|+|++|+.||...........+...  ....|..++..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGY-GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCC-CcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence             111234568999999999977665 48899999999999999999999876655544444332  23456667888999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCcccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      +|++|+. +|++||++++|+.|||+.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9999995 999999999999999974


No 172
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00  E-value=1.6e-42  Score=335.28  Aligned_cols=251  Identities=33%  Similarity=0.544  Sum_probs=216.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|++.....   ...+.+.+|+.+++.++||||+++++++...+.+|++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~   78 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV   78 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence            4689999999999999999999999999999999976532   2457889999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.+++|.+++..  ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++........  
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--  156 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--  156 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--
Confidence            999999999998864  5799999999999999999999999999999999999999999999999999876543221  


Q ss_pred             ccccccCCCcccChhhhccc---CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-----CCCCCCHH
Q 012021          167 LLHTTCGTPAYVAPEVINRR---GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-----FPNWFAPE  238 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~s~~  238 (472)
                      ......++..|+|||.+...   .++ .++|+||||+++|+|++|..||...+.......+....+.     .+..++.+
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~-~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVERKGGYD-GKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPV  235 (262)
T ss_pred             ccccccCCccccCchhhcccccCCcC-chhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHH
Confidence            12345789999999998765   454 7899999999999999999999887665554444444222     22335788


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCcc
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSW  265 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~  265 (472)
                      +.++|.+||..+|..|||+.+|+.|+|
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         236 FHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999999999999999999999998


No 173
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00  E-value=1.7e-42  Score=334.55  Aligned_cols=248  Identities=31%  Similarity=0.582  Sum_probs=216.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||.|+||.||++.+..+++.||+|.+.....  ....+.+.+|+.+++.++||||+++++.+.+++.+|++||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            59999999999999999999999999999999865432  2345778899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+++++|.+++..   +.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++........  .
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~  156 (255)
T cd08219          79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--Y  156 (255)
T ss_pred             eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--c
Confidence            9999999888753   4589999999999999999999999999999999999999999999999999875543221  1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhcc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~~  246 (472)
                      .....|++.|+|||++.+..+ +.++|+||||+++|+|++|..||...+....+..+..+.. ..|..++..+.++|.+|
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPY-NNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQM  235 (255)
T ss_pred             cccccCCccccCHHHHccCCc-CchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence            234568999999999877665 4789999999999999999999998887777766665544 35667889999999999


Q ss_pred             cCCCCCCcCChhhhhcC
Q 012021          247 LDPNPNTRISMTKIMEN  263 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h  263 (472)
                      |+.||.+|||+.+|+.-
T Consensus       236 l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         236 FKRNPRSRPSATTILSR  252 (255)
T ss_pred             HhCCcccCCCHHHHhhc
Confidence            99999999999999863


No 174
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=100.00  E-value=8.2e-43  Score=341.56  Aligned_cols=247  Identities=31%  Similarity=0.523  Sum_probs=211.7

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||+|+||+||+|.+..+|+.||+|.+.+...........+.+|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999999999999999999765543333445667899999999999999999999999999999999999999


Q ss_pred             cchhcc-C--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           98 FGKVAK-G--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        98 ~~~i~~-~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      .+++.. +  .+++..++.++.|++.||.|||++|++||||+|+||+++.++.++|+|||++......   .......++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~  157 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKGRAGT  157 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---CccccccCC
Confidence            988854 3  6999999999999999999999999999999999999999999999999998765431   122345688


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhccCCCCCCCCCHHHHHHHhcccCCC
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPN  250 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~d  250 (472)
                      ..|+|||.+.+..+ +.++||||||+++|+|++|+.||.....    ..+...+.......+..+++++.++|.+||+.|
T Consensus       158 ~~y~~PE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  236 (277)
T cd05577         158 PGYMAPEVLQGEVY-DFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD  236 (277)
T ss_pred             CCcCCHHHhcCCCC-CchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence            89999999877664 4789999999999999999999976543    333333444455667778999999999999999


Q ss_pred             CCCcC-----ChhhhhcCccccc
Q 012021          251 PNTRI-----SMTKIMENSWFRK  268 (472)
Q Consensus       251 P~~Rp-----t~~eil~h~~f~~  268 (472)
                      |.+||     ++.++++||||..
T Consensus       237 p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         237 PEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             hhHccCCCcccHHHHHhChhhhc
Confidence            99999     8888999999975


No 175
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00  E-value=1.5e-42  Score=334.44  Aligned_cols=253  Identities=29%  Similarity=0.526  Sum_probs=218.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ||+..+.||+|+||+||+|.+..+++.||+|.+......  .....+.+.+|+.+++.++||||+++++++.+...+|++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            688999999999999999999889999999998654321  123456789999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +||+++++|.+++.+ +.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++.......   .
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~  157 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---F  157 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---c
Confidence            999999999999876 469999999999999999999999999999999999999999999999999987654322   2


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--cCCCCCCCCCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--AEFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~s~~l~~li~~  245 (472)
                      .....|++.|+|||.+......+.++|+||||+++|+|++|..||..........++..  ....++..+++++.+++.+
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  237 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILK  237 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHH
Confidence            24567899999999987655245889999999999999999999987765554444443  2335566789999999999


Q ss_pred             ccCCCCCCcCChhhhhcCccc
Q 012021          246 ILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ||..+|.+|||+.+++.|||+
T Consensus       238 ~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         238 CLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HhhcCcccCcCHHHHhcCCCC
Confidence            999999999999999999996


No 176
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00  E-value=9.9e-43  Score=346.55  Aligned_cols=258  Identities=31%  Similarity=0.469  Sum_probs=213.3

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKI   85 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~   85 (472)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|.+....... .....+.+|+.+++.++|+||+++++++...  +.+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence            3568999999999999999999999999999999987543221 2233456899999999999999999998655  578


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+||||+.+ +|.+++..  ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus        84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~  162 (309)
T cd07845          84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA  162 (309)
T ss_pred             EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence            999999965 67777654  579999999999999999999999999999999999999999999999999987654322


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc----------------
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA----------------  227 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~----------------  227 (472)
                      .  ......+++.|+|||++.+....+.++|||||||++|+|++|..||...+....+..+...                
T Consensus       163 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
T cd07845         163 K--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP  240 (309)
T ss_pred             C--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence            1  1233356888999999876554568999999999999999999999988776665554321                


Q ss_pred             ---CCCCC-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---EFKFP-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---~~~~~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                         .+..+           .++++++.++|.+||++||++|||+.+++.||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence               11111           2358899999999999999999999999999999853


No 177
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00  E-value=5e-43  Score=358.95  Aligned_cols=254  Identities=23%  Similarity=0.393  Sum_probs=207.6

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEE-----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARN-----LKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~   80 (472)
                      +-.++|++++.||+|+||+||+|.+     ..++..||+|++.....  ....+.+.+|+.+|+.+ +||||+++++++.
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            4456899999999999999999974     34677899999865432  23346788999999999 8999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhccC--------------------------------------------------------
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAKG--------------------------------------------------------  104 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~~--------------------------------------------------------  104 (472)
                      ..+..|+||||++||+|.+++...                                                        
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            999999999999999998877431                                                        


Q ss_pred             --------------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021          105 --------------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus       105 --------------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                                          .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  269 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN  269 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence                                367888999999999999999999999999999999999999999999999876543222


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHH-HHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLM-EMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~-~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      ........++..|+|||++.+..+. .++|||||||++|+|++ |..||...... ..+..+..+ ....|...+.++.+
T Consensus       270 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  348 (375)
T cd05104         270 YVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYD  348 (375)
T ss_pred             ccccCCCCCCcceeChhHhcCCCCC-CCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHH
Confidence            1111223456779999999777664 89999999999999998 89999876543 333333333 23345667899999


Q ss_pred             HHhcccCCCCCCcCChhhhhcC
Q 012021          242 LLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ||.+||++||++|||+.+|++.
T Consensus       349 li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999999999865


No 178
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=100.00  E-value=1e-42  Score=341.57  Aligned_cols=255  Identities=32%  Similarity=0.535  Sum_probs=215.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+.+|+.+++.++|+||+++++++..++..|+||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence            589999999999999999999999999999999865432 2244578899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||+.++.+..+..+ ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.+||+|||++........ ...
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~  158 (288)
T cd07833          80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-SPL  158 (288)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-ccc
Confidence            99998777666654 5699999999999999999999999999999999999999999999999999886654332 123


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---------------------
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---------------------  227 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---------------------  227 (472)
                      ....++..|+|||++.+....+.++||||||+++|+|++|..||...+..+....+...                     
T Consensus       159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence            44678899999999987734558999999999999999999999876554433322110                     


Q ss_pred             C-----------CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          228 E-----------FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       228 ~-----------~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .           ..++..+++++.+||.+||..+|++|||+++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            0           01233458899999999999999999999999999998


No 179
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=100.00  E-value=6.4e-43  Score=342.89  Aligned_cols=252  Identities=30%  Similarity=0.487  Sum_probs=209.7

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++++.||.|+||.||+|.+..+|+.||||.+...... ......+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence            489999999999999999999999999999998654322 2334578899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+. ++|..++..   +.+++..++.++.|++.||+|||++|++||||+|+||+++.++.+||+|||++.......  ..
T Consensus        80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--~~  156 (284)
T cd07860          80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RT  156 (284)
T ss_pred             ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--cc
Confidence            996 578777643   568999999999999999999999999999999999999999999999999987554321  12


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------CC
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------EF  229 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------~~  229 (472)
                      .....+++.|+|||.+.+....+.++||||||+++|+|+||..||...+......++...                  ..
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07860         157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP  236 (284)
T ss_pred             cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence            234467889999999876665568899999999999999999999876654333222110                  00


Q ss_pred             C-----------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 K-----------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ~-----------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .           ..+.++++++++|.+||+.||.+|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            1           112367889999999999999999999999999998


No 180
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00  E-value=1.2e-42  Score=340.83  Aligned_cols=252  Identities=29%  Similarity=0.456  Sum_probs=210.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE------
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA------   80 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~------   80 (472)
                      ..++|++.+.||.|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+ +||||+++++++.      
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence            3578999999999999999999999999999999986543    2335688899999988 6999999999984      


Q ss_pred             eCCEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      ....+|++|||+.+|+|.+++..   ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            35689999999999999988854   458999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcccCCCccccccCCCcccChhhhcc-----cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-C-
Q 012021          158 LAESKHQDGLLHTTCGTPAYVAPEVINR-----RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-K-  230 (472)
Q Consensus       158 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~-  230 (472)
                      ......  .......|++.|+|||.+..     ..+ +.++|+|||||++|+|++|..||...........+..... . 
T Consensus       170 ~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~-~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  246 (282)
T cd06636         170 QLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATY-DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKL  246 (282)
T ss_pred             hhhccc--cCCCcccccccccCHhhcCcccCcCcCC-CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCC
Confidence            654321  12244678999999999753     233 4689999999999999999999987665544443333221 1 


Q ss_pred             CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          231 FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       231 ~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .+..+++++.++|.+||..||.+|||+.+|++||||
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         247 KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            223478999999999999999999999999999997


No 181
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00  E-value=1.2e-42  Score=338.06  Aligned_cols=252  Identities=33%  Similarity=0.507  Sum_probs=212.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC-----
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASK-----   82 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~-----   82 (472)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++.....    ..+.+.+|+.+++.+ +||||+++++++...     
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            5799999999999999999999999999999999876542    336788999999998 699999999999654     


Q ss_pred             -CEEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           83 -TKIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                       ..+|+||||+.+++|.+++..     +.+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence             458999999999999887753     57999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccC----CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRG----YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---  229 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---  229 (472)
                      .......  .......|++.|+|||++....    ..+.++||||||+++|+|++|..||...........+.....   
T Consensus       161 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (275)
T cd06608         161 AQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL  238 (275)
T ss_pred             eecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC
Confidence            7543321  1223456899999999975432    234689999999999999999999987666555555554422   


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..+..++.++.++|.+||..||++|||+.++++|||+
T Consensus       239 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         239 KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            2233367899999999999999999999999999996


No 182
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00  E-value=1e-42  Score=350.97  Aligned_cols=260  Identities=29%  Similarity=0.482  Sum_probs=211.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|.+....  .......+.+|+.+++.++||||+++++++...     
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   80 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF   80 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence            4578999999999999999999999999999999986432  223456678899999999999999999987544     


Q ss_pred             CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           83 TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ...|+++||+.+ +|.+.+..+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        81 ~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          81 NDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             ceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            358999999964 8888888888999999999999999999999999999999999999999999999999998765332


Q ss_pred             cC-CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc---------------
Q 012021          163 HQ-DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK---------------  226 (472)
Q Consensus       163 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~---------------  226 (472)
                      .. .......+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+..               
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence            21 11223457899999999876544445899999999999999999999977654332221110               


Q ss_pred             c---------C--CC-----CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          227 A---------E--FK-----FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       227 ~---------~--~~-----~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      .         .  ..     ..+..++++.++|.+||+.+|++|||+.++++||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            0         0  00     1123578899999999999999999999999999998643


No 183
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00  E-value=7.1e-43  Score=337.36  Aligned_cols=250  Identities=37%  Similarity=0.693  Sum_probs=220.5

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||.|+||.||++.+..+|+.+|+|++...........+.+.+|+.+++.++||||+++++.+..+...|++|||+.+++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999999999999999776544445567899999999999999999999999999999999999999999


Q ss_pred             cchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC------CCcccc
Q 012021           98 FGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ------DGLLHT  170 (472)
Q Consensus        98 ~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~------~~~~~~  170 (472)
                      .+++.+ +.+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........      ......
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            998876 6899999999999999999999999999999999999999999999999999876543321      012234


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCC--CHHHHHHHhcccC
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWF--APEVRRLLSKILD  248 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--s~~l~~li~~~L~  248 (472)
                      ..+++.|+|||.+....+ +.++|+||||+++|+|++|..||........+..+.......|...  ++.+.+++.+||+
T Consensus       161 ~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (265)
T cd05579         161 IVGTPDYIAPEVILGQGH-SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV  239 (265)
T ss_pred             cccCccccCHHHhcCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhc
Confidence            568889999999876664 4899999999999999999999998888888888877777776665  8999999999999


Q ss_pred             CCCCCcCCh---hhhhcCccccc
Q 012021          249 PNPNTRISM---TKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt~---~eil~h~~f~~  268 (472)
                      .+|.+|||+   .++++||||++
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             CCHhhcCCCccHHHHhcCccccC
Confidence            999999999   99999999974


No 184
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00  E-value=3.8e-44  Score=357.19  Aligned_cols=249  Identities=33%  Similarity=0.652  Sum_probs=222.7

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||.|-||+||-|.++.+|+.||||+|++.+... ...+++++|++||+.+.||.||.+--.|++.+++|+|||-+.|.
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            78999999999999999999999999999987654 33488999999999999999999999999999999999999776


Q ss_pred             cccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC---CEEEeeccchhhhhcccCCCcccc
Q 012021           96 ELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG---NLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        96 ~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g---~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      -|.-.+.  +|+++|...+.++.||+.||+|||-+||+|+|||||||||.+..   .+||||||+|+.+..+.-   -.+
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF---Rrs  725 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF---RRS  725 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh---hhh
Confidence            6655554  48999999999999999999999999999999999999997665   599999999998875433   356


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCC--C--CCHHHHHHHhcc
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPN--W--FAPEVRRLLSKI  246 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~--~s~~l~~li~~~  246 (472)
                      .+|||.|.|||++..++|. ..-|+||.|||+|.-+.|..||....  ++..+|.++.+.+|+  |  +++++.+||..+
T Consensus       726 VVGTPAYLaPEVLrnkGyN-rSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~eis~~AidlIn~L  802 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYN-RSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEISPEAIDLINNL  802 (888)
T ss_pred             hcCCccccCHHHHhhcccc-ccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhcCHHHHHHHHHH
Confidence            7899999999999999998 78999999999999999999997654  455678888887775  3  899999999999


Q ss_pred             cCCCCCCcCChhhhhcCcccccCCC
Q 012021          247 LDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      |+..-.+|+|++..+.|||++....
T Consensus       803 LqVkm~kRysvdk~lsh~Wlq~yq~  827 (888)
T KOG4236|consen  803 LQVKMRKRYSVDKSLSHPWLQDYQT  827 (888)
T ss_pred             HHHHHHHhcchHhhccchhhhcchH
Confidence            9999999999999999999997543


No 185
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00  E-value=1.7e-42  Score=337.54  Aligned_cols=251  Identities=20%  Similarity=0.304  Sum_probs=211.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      -.++|++.+.||+|+||.||+|.+.   ..+..||+|.+.....  ......+.+|+.+++.++||||+++++++..++.
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   80 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT   80 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence            4568999999999999999999765   3567899999876532  2334678899999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .|+||||+++|+|.+++..  +.+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence            9999999999999998865  47999999999999999999999999999999999999999999999999986643221


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      .. .......++..|+|||.+.+..+. .++|||||||++|++++ |..||...+.......+..+ ....|..++..+.
T Consensus       161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (266)
T cd05064         161 AI-YTTMSGKSPVLWAAPEAIQYHHFS-SASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLH  238 (266)
T ss_pred             ch-hcccCCCCceeecCHHHHhhCCcc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHH
Confidence            11 011123456789999998776664 79999999999999775 99999988877777766654 3455667899999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +++.+||..+|.+|||+++|++
T Consensus       239 ~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         239 QLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHcCCCchhCCCHHHHHH
Confidence            9999999999999999999975


No 186
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00  E-value=6.1e-43  Score=345.89  Aligned_cols=255  Identities=27%  Similarity=0.496  Sum_probs=218.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|.....||+|+||.||++.+..++..||||.+....   ....+.+.+|+.+++.++||||+++++.+...+..|+||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~   98 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM   98 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence            45666788999999999999999999999999986543   234567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      ||+++++|.+++..+.+++.+++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++........  ...
T Consensus        99 e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~  176 (292)
T cd06658          99 EFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK  176 (292)
T ss_pred             eCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence            999999999998888899999999999999999999999999999999999999999999999999875433221  123


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---CCCCCCCCHHHHHHHhcc
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---FKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~s~~l~~li~~~  246 (472)
                      ...|++.|+|||.+.+..+. .++|+||||+++|+|++|..||...+.......+....   ......++..+.+++.+|
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  255 (292)
T cd06658         177 SLVGTPYWMAPEVISRLPYG-TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLM  255 (292)
T ss_pred             eeecCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHH
Confidence            45789999999998776654 78999999999999999999998877665555544322   222234788999999999


Q ss_pred             cCCCCCCcCChhhhhcCcccccCC
Q 012021          247 LDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      |..||++|||++++++||||+...
T Consensus       256 l~~~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         256 LVREPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             ccCChhHCcCHHHHhhChhhhccC
Confidence            999999999999999999998643


No 187
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00  E-value=1.5e-42  Score=344.03  Aligned_cols=257  Identities=27%  Similarity=0.421  Sum_probs=206.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT----   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----   83 (472)
                      ..++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++||||+++++++....    
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            456899999999999999999999999999999998654322 122345678999999999999999999986543    


Q ss_pred             ----EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           84 ----KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        84 ----~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                          ..|+||||+.+ +|.+.+..  ..+++.+++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  167 (310)
T cd07865          89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR  167 (310)
T ss_pred             CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence                56999999965 77777654  379999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcccCC--CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC------
Q 012021          158 LAESKHQD--GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF------  229 (472)
Q Consensus       158 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~------  229 (472)
                      ........  .......++..|+|||.+.+....+.++||||||+++|+|++|..||...+.......+.....      
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (310)
T cd07865         168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV  247 (310)
T ss_pred             cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence            65432221  1223456788999999987655445789999999999999999999987765443332221100      


Q ss_pred             -------------CCC-------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 -------------KFP-------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 -------------~~~-------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                   .+|             ...++.+.++|.+||..||.+|||++++++||||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                         011             1135678899999999999999999999999998


No 188
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00  E-value=2.3e-42  Score=339.34  Aligned_cols=253  Identities=27%  Similarity=0.475  Sum_probs=210.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE-----e
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA-----S   81 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~-----~   81 (472)
                      ..++|++.+.||+|+||+||+|.+..+++.+|+|++....    .....+.+|+.+++.+ +||||+++++++.     .
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   91 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN   91 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence            4679999999999999999999999999999999986532    1235678899999998 6999999999873     4


Q ss_pred             CCEEEEEEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           82 KTKIYFVMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                      ++..|+||||++|++|.+++.     .+.+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~  171 (286)
T cd06638          92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS  171 (286)
T ss_pred             CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence            567999999999999988764     246899999999999999999999999999999999999999999999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhccc----CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---C
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRR----GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---F  229 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~  229 (472)
                      ........  ......|++.|+|||++...    ...+.++|||||||++|+|++|..||..........++....   .
T Consensus       172 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (286)
T cd06638         172 AQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTL  249 (286)
T ss_pred             eecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcc
Confidence            75533211  12345699999999997532    123478999999999999999999998776554444433222   2


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..|..++.++.++|.+||+.||++|||+.++++|+||
T Consensus       250 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         250 HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            2345568899999999999999999999999999997


No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=100.00  E-value=1.9e-42  Score=340.95  Aligned_cols=253  Identities=31%  Similarity=0.513  Sum_probs=206.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++++.+++..|+|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            57899999999999999999999999999999998754321  1223466899999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.+ +|.+++..  +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........  
T Consensus        82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--  158 (291)
T cd07844          82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--  158 (291)
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--
Confidence            999975 88887754  4689999999999999999999999999999999999999999999999999875432211  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHhcc------------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIGKA------------------  227 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~~~------------------  227 (472)
                      ......+++.|+|||++.+....+.++||||||+++|+|++|+.||.... ..+....+...                  
T Consensus       159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF  238 (291)
T ss_pred             cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence            12234578899999998765444578999999999999999999997655 22222211100                  


Q ss_pred             -CCCC-----------CCCCC--HHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          228 -EFKF-----------PNWFA--PEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       228 -~~~~-----------~~~~s--~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                       ....           ...++  .++.++|.+||.++|.+|||+.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence             0000           01233  788999999999999999999999999998


No 190
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00  E-value=2.3e-42  Score=350.86  Aligned_cols=257  Identities=30%  Similarity=0.501  Sum_probs=211.0

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK----   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   82 (472)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|.+.+... .......+.+|+.+++.++||||+++++++...    
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence            467899999999999999999999999999999999865432 223446677899999999999999999998543    


Q ss_pred             --CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 --TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 --~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                        ...|+||||+.+ +|.+.+... +++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        92 ~~~~~~lv~e~~~~-~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          92 EFQDVYLVMELMDA-NLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             ccCcEEEEEeccCC-CHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence              357999999965 777776544 9999999999999999999999999999999999999999999999999987653


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------  227 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------  227 (472)
                      ...   ......||+.|+|||.+.+..+. .++|||||||++|+|++|+.||...+....+.++...             
T Consensus       170 ~~~---~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (353)
T cd07850         170 TSF---MMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ  245 (353)
T ss_pred             CCC---CCCCCcccccccCHHHHhCCCCC-CchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence            321   12345689999999999887765 8899999999999999999999876654443333110             


Q ss_pred             ---------CCC--------------C-------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          228 ---------EFK--------------F-------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       228 ---------~~~--------------~-------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                               ...              +       +...+++++++|.+||+.||++|||+.|+++||||+.-.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         246 PTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWY  318 (353)
T ss_pred             hhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence                     000              0       112356789999999999999999999999999997533


No 191
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00  E-value=2.7e-42  Score=337.87  Aligned_cols=255  Identities=30%  Similarity=0.519  Sum_probs=220.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      =|++.+.||.|+||.||+|.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++++..++..|+|||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   82 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME   82 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence            478899999999999999999999999999998654322  345678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      |+.+++|.+++..+.+++..+..++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||++........  ....
T Consensus        83 ~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~  160 (277)
T cd06641          83 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNT  160 (277)
T ss_pred             eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--hhcc
Confidence            99999999999888899999999999999999999999999999999999999999999999998875433211  1233


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhcccCC
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~  249 (472)
                      ..|+..|+|||.+...... .++|+|||||++|+|++|..||...........+.... ..++..++.++.++|.+||..
T Consensus       161 ~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  239 (277)
T cd06641         161 FVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK  239 (277)
T ss_pred             ccCCccccChhhhccCCCC-chhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccC
Confidence            4688999999998766554 78999999999999999999998877666555554433 345566889999999999999


Q ss_pred             CCCCcCChhhhhcCcccccCC
Q 012021          250 NPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       250 dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +|.+||++.+++.||||.+..
T Consensus       240 ~p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         240 EPSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             ChhhCcCHHHHHhCHHHhhhh
Confidence            999999999999999998743


No 192
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=100.00  E-value=1.6e-42  Score=334.08  Aligned_cols=250  Identities=30%  Similarity=0.526  Sum_probs=216.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|.+.....     .+.+.+|+.+++.++||||+++++++.+....|++
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence            3689999999999999999999998899999999865431     57899999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      +||+.+++|.+++..  ..+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++........  
T Consensus        77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--  154 (256)
T cd06612          77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--  154 (256)
T ss_pred             EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence            999999999999864  5789999999999999999999999999999999999999999999999999886644321  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc---CCCCCCCCCHHHHHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA---EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~s~~l~~li  243 (472)
                      ......|+..|+|||++.+..++ .++||||||+++|+|++|..||...........+...   ....+..++.++.++|
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  233 (256)
T cd06612         155 KRNTVIGTPFWMAPEVIQEIGYN-NKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFV  233 (256)
T ss_pred             ccccccCCccccCHHHHhcCCCC-chhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHH
Confidence            12344588999999999877664 7899999999999999999999876655443333222   2233445788999999


Q ss_pred             hcccCCCCCCcCChhhhhcCccc
Q 012021          244 SKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .+||+.||++|||+.+++.||||
T Consensus       234 ~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         234 KKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999999997


No 193
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-44  Score=359.78  Aligned_cols=258  Identities=33%  Similarity=0.604  Sum_probs=239.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +-....+++.+||-|+||.|-++........+|+|++++..+.+....+.+..|-.||...+.|.||++|..|.+..++|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            34556788999999999999999876555569999999998888788889999999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ++||-|-||+|...++. |.+++..++.|+..+++|++|||++||++|||||+|++||.+|-+||.|||+|+....... 
T Consensus       497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K-  575 (732)
T KOG0614|consen  497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK-  575 (732)
T ss_pred             hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc-
Confidence            99999999999999975 7899999999999999999999999999999999999999999999999999998876443 


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~li  243 (472)
                        .-+.||||.|+|||++..++.+ .++|.||||+++|||++|.+||.+.+++..|..|.++  .+.+|..++..+.+||
T Consensus       576 --TwTFcGTpEYVAPEIILnKGHD-~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Li  652 (732)
T KOG0614|consen  576 --TWTFCGTPEYVAPEIILNKGHD-RAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLI  652 (732)
T ss_pred             --eeeecCCcccccchhhhccCcc-hhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHH
Confidence              5789999999999999999988 8999999999999999999999999999999999887  4788999999999999


Q ss_pred             hcccCCCCCCcCC-----hhhhhcCccccc
Q 012021          244 SKILDPNPNTRIS-----MTKIMENSWFRK  268 (472)
Q Consensus       244 ~~~L~~dP~~Rpt-----~~eil~h~~f~~  268 (472)
                      +++...+|.+|..     +.+|..|.||..
T Consensus       653 k~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  653 KKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             HHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            9999999999996     789999999964


No 194
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=4e-43  Score=354.34  Aligned_cols=241  Identities=29%  Similarity=0.493  Sum_probs=210.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .+.+++.||+|-||+||++... ....||+|.+......    .+.+.+|+.+|+.|+|+|||++++++..+.-+|||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE  281 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE  281 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence            3456789999999999999983 2348999999765432    2567799999999999999999999999889999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |++.|+|.+++..   +.+...+...++.||++|++||+++++|||||...|||++++..+||+|||||+......    
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~----  357 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE----  357 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCc----
Confidence            9999999999976   469999999999999999999999999999999999999999999999999999443211    


Q ss_pred             cccccC---CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHH
Q 012021          168 LHTTCG---TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRL  242 (472)
Q Consensus       168 ~~~~~g---t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~l  242 (472)
                      .....|   ...|+|||.+....++ .+||||||||+|+||+| |+.||...+..+....+.++. .+.|..+|+++.++
T Consensus       358 Y~~~~~~kfPIkWtAPEa~~~~~FS-~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~l  436 (468)
T KOG0197|consen  358 YTASEGGKFPIKWTAPEALNYGKFS-SKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYEL  436 (468)
T ss_pred             eeecCCCCCCceecCHHHHhhCCcc-cccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHH
Confidence            122222   3359999999888776 89999999999999999 999999999999999998874 67889999999999


Q ss_pred             HhcccCCCCCCcCChhhhh
Q 012021          243 LSKILDPNPNTRISMTKIM  261 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil  261 (472)
                      +..||..+|++|||++.+.
T Consensus       437 M~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  437 MKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHhhCCcccCCCHHHHH
Confidence            9999999999999999664


No 195
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00  E-value=3.4e-42  Score=332.66  Aligned_cols=252  Identities=32%  Similarity=0.606  Sum_probs=219.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE--eCCEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA--SKTKIYFV   88 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~lV   88 (472)
                      +|++.+.||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+.+++.++||||+++++++.  .+...|++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence            599999999999999999999999999999998765432 344567889999999999999999999875  34678999


Q ss_pred             EEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           89 MEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCH-----SRGVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH-----~~giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      |||+++++|.+++..     +.+++..++.++.||+.||.|||     +.+++|+||||+||+++.++.+||+|||++..
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            999999999888853     57999999999999999999999     89999999999999999999999999999886


Q ss_pred             hhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCH
Q 012021          159 AESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAP  237 (472)
Q Consensus       159 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~  237 (472)
                      ......  ......|++.|+|||.+....+ +.++|+||||+++++|++|..||...+.......+..... .++..++.
T Consensus       160 ~~~~~~--~~~~~~~~~~~~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (265)
T cd08217         160 LGHDSS--FAKTYVGTPYYMSPEQLNHMSY-DEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSS  236 (265)
T ss_pred             ccCCcc--cccccccCCCccChhhhcCCCC-CchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCH
Confidence            654321  1234578999999999877665 4789999999999999999999998877777777766554 45667889


Q ss_pred             HHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          238 EVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       238 ~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ++.+++.+||..+|++|||+.+|++|||+
T Consensus       237 ~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         237 ELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            99999999999999999999999999995


No 196
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00  E-value=5.1e-42  Score=332.11  Aligned_cols=255  Identities=34%  Similarity=0.614  Sum_probs=216.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      ||++.+.||+|+||.||.+.+..+++.||+|.+...... ....+.+.+|+.+++.++|+||+++++++.+.+.+++|+|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            799999999999999999999989999999999766533 3456789999999999999999999999999999999999


Q ss_pred             ecCCCcccchhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC-c-
Q 012021           91 YVKGGELFGKVAKG-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG-L-  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~-~-  167 (472)
                      |+.+++|.+++..+ .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.......... . 
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            99999999999764 68999999999999999999999999999999999999999999999999988654332211 1 


Q ss_pred             cccccCCCcccChhhhcccC--CCCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHh-ccCCCCCCCC--CHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRG--YDGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIG-KAEFKFPNWF--APEVRR  241 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~-~~~~~~~~~~--s~~l~~  241 (472)
                      .....+++.|+|||.+....  ..+.++||||||++++++++|..||.... .......+. .....+|.+.  ++.+.+
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKD  239 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHH
Confidence            22457889999999987654  23578999999999999999999997653 222222222 2334555554  899999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +|.+||+.+|.+|||+.+++.|||+
T Consensus       240 li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         240 FLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999996


No 197
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00  E-value=1.3e-42  Score=346.38  Aligned_cols=247  Identities=28%  Similarity=0.442  Sum_probs=192.8

Q ss_pred             EEeeEcccCCeEEEEEEEcC--CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE--eCCEEEEEE
Q 012021           14 LGRLLGQGTFAKVHYARNLK--TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA--SKTKIYFVM   89 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~lV~   89 (472)
                      .+.+||+|+||+||+|++..  ++..||+|.+.....     ...+.+|+.+++.++||||+++++++.  .+..+|+||
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence            34789999999999999754  668999999865432     245778999999999999999999984  456889999


Q ss_pred             EecCCCcccchhcc----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE----cCCCCEEEeeccc
Q 012021           90 EYVKGGELFGKVAK----------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL----DEHGNLKVSDFGL  155 (472)
Q Consensus        90 E~~~gg~L~~~i~~----------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl----d~~g~vkl~DFGl  155 (472)
                      ||+.+ +|.+++..          ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            99865 66665531          258899999999999999999999999999999999999    5667899999999


Q ss_pred             hhhhhcccCC-CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH---------HHHHHHh
Q 012021          156 SALAESKHQD-GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM---------EMYRKIG  225 (472)
Q Consensus       156 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~---------~~~~~i~  225 (472)
                      +......... .......||+.|+|||++.+....+.++|||||||++|+|+||..||......         ....++.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~  238 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF  238 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence            9865432211 12344578999999999977655568999999999999999999999643211         0000000


Q ss_pred             c----------------------------cCC----------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          226 K----------------------------AEF----------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       226 ~----------------------------~~~----------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .                            ...          ......+..+.+||.+||+.||.+|||++|+++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0                            000          0011134568899999999999999999999999998


No 198
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00  E-value=3.2e-42  Score=348.66  Aligned_cols=256  Identities=29%  Similarity=0.434  Sum_probs=215.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT----   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----   83 (472)
                      +.++|++++.||+|+||.||+|.+..+|..||||.+.+... .......+.+|+.+|+.++||||+++++++..+.    
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            56799999999999999999999999999999999865432 2234456889999999999999999999987654    


Q ss_pred             --EEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 --KIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 --~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                        .+|+||||+ |++|.+++..+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence              468999999 77898888888899999999999999999999999999999999999999999999999999875432


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC------------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF------------  229 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~------------  229 (472)
                      .     .....+++.|+|||.+.+....+.++|+||||+++|+|++|..||...+....+.++.....            
T Consensus       171 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd07880         171 E-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQS  245 (343)
T ss_pred             C-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcc
Confidence            1     23346789999999987644456889999999999999999999987765544443322111            


Q ss_pred             -------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          230 -------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       230 -------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                         .....+++++.++|.+||..||++|||+.+++.||||+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence                               11235788899999999999999999999999999998643


No 199
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.3e-43  Score=359.52  Aligned_cols=249  Identities=30%  Similarity=0.528  Sum_probs=216.7

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCc
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGE   96 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~   96 (472)
                      .||+|+||+||.|+|..|....|||.+.....   ....-++.||...++|+|.|||+++|.+..++++-++||-++||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            69999999999999999999999999965432   445779999999999999999999999999999999999999999


Q ss_pred             ccchhcc--CCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEc-CCCCEEEeeccchhhhhcccCCCccccc
Q 012021           97 LFGKVAK--GKL--KEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLD-EHGNLKVSDFGLSALAESKHQDGLLHTT  171 (472)
Q Consensus        97 L~~~i~~--~~l--~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld-~~g~vkl~DFGla~~~~~~~~~~~~~~~  171 (472)
                      |.++++.  |++  .|...-.|.+||++||.|||++.|+|||||-+|+|++ -.|.+||+|||-++....-.  ....+.
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TETF  736 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETF  736 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC--cccccc
Confidence            9999975  787  8999999999999999999999999999999999996 57899999999988765432  335677


Q ss_pred             cCCCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCc-HH-HHHH-HHhccCCCCCCCCCHHHHHHHhcc
Q 012021          172 CGTPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSN-LM-EMYR-KIGKAEFKFPNWFAPEVRRLLSKI  246 (472)
Q Consensus       172 ~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~-~~~~-~i~~~~~~~~~~~s~~l~~li~~~  246 (472)
                      -||..|||||++...  +| +.++|||||||++.||.||++||.... +. .+++ -+.+..+++|..++.+++.||.+|
T Consensus       737 TGTLQYMAPEvIDqG~RGY-G~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filrc  815 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQGPRGY-GKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRC  815 (1226)
T ss_pred             ccchhhhChHhhccCCcCC-CchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHH
Confidence            899999999999543  44 589999999999999999999997643 22 3332 123456788888999999999999


Q ss_pred             cCCCCCCcCChhhhhcCcccccCCC
Q 012021          247 LDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       247 L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      +.+||..||++.++|.+||++.+..
T Consensus       816 Fepd~~~R~sA~~LL~DpFlq~~~k  840 (1226)
T KOG4279|consen  816 FEPDPCDRPSAKDLLQDPFLQHNNK  840 (1226)
T ss_pred             cCCCcccCccHHHhccCcccccCCC
Confidence            9999999999999999999987643


No 200
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00  E-value=3.6e-42  Score=339.45  Aligned_cols=254  Identities=31%  Similarity=0.444  Sum_probs=207.9

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCE----
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTK----   84 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~----   84 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.++ ||||+++++++.....    
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            5799999999999999999999999999999998654322 233456788999999995 6999999999877665    


Q ss_pred             -EEEEEEecCCCcccchhcc------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccch
Q 012021           85 -IYFVMEYVKGGELFGKVAK------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLS  156 (472)
Q Consensus        85 -~~lV~E~~~gg~L~~~i~~------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla  156 (472)
                       .|+||||+.+ +|.+++..      ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence             8999999986 68777642      35899999999999999999999999999999999999998 889999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--------
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--------  228 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--------  228 (472)
                      .......  .......+++.|+|||++.+....+.++||||||+++|+|++|..||...+....+.++....        
T Consensus       159 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T cd07837         159 RAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW  236 (295)
T ss_pred             eecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence            7543221  112334678899999998665444689999999999999999999998876655444332210        


Q ss_pred             ---------CCC-----------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          229 ---------FKF-----------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       229 ---------~~~-----------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                               ...           .+.+++++.++|.+||.+||.+|||+.+++.||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                     000           123688899999999999999999999999999985


No 201
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00  E-value=1.4e-42  Score=336.58  Aligned_cols=252  Identities=29%  Similarity=0.504  Sum_probs=217.1

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++.+...+..|+++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM   78 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence            4689999999999999999999999999999998765422  34567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      ||+.+++|.+++..  ..+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||++........  
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--  156 (265)
T cd06605          79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--  156 (265)
T ss_pred             EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence            99999999999864  679999999999999999999999 9999999999999999999999999999876543222  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC-----cHHHHHHHHhcc-CCCCCCC-CCHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS-----NLMEMYRKIGKA-EFKFPNW-FAPEV  239 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~-----~~~~~~~~i~~~-~~~~~~~-~s~~l  239 (472)
                        ....|+..|+|||.+.+..+. .++||||||+++|+|++|..||...     ........+... ....+.. +++++
T Consensus       157 --~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (265)
T cd06605         157 --KTFVGTSSYMAPERIQGNDYS-VKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF  233 (265)
T ss_pred             --hcccCChhccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHH
Confidence              226789999999999777654 8899999999999999999999764     233344443332 2344444 78999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .++|.+||..||.+|||+.+++.||||++
T Consensus       234 ~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         234 QDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            99999999999999999999999999975


No 202
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=100.00  E-value=3.6e-42  Score=337.36  Aligned_cols=251  Identities=32%  Similarity=0.503  Sum_probs=210.6

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||.|++|.||+|.+..+|+.||||.+......  .....+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            599999999999999999999999999999998765321  234567789999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           91 YVKGGELFGKVAK----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        91 ~~~gg~L~~~i~~----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |+.+ +|.+++..    ..+++..+..++.||+.||.|||++|++||||||+||++++++.++|+|||++........  
T Consensus        79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--  155 (284)
T cd07836          79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--  155 (284)
T ss_pred             cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--
Confidence            9985 77777653    3589999999999999999999999999999999999999999999999999875543221  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC------------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE------------------  228 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~------------------  228 (472)
                      ......+++.|+|||.+.+....+.++||||||+++|+|++|..||.+.+..+.+.++....                  
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK  235 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence            12345678999999998765555689999999999999999999998876655544432110                  


Q ss_pred             CC-----------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 FK-----------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ~~-----------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..           +.+..++++.++|.+||+.||.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            00           112357889999999999999999999999999998


No 203
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=100.00  E-value=5.6e-43  Score=342.51  Aligned_cols=255  Identities=29%  Similarity=0.504  Sum_probs=219.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|+..+.||+|+||.||+|.+..+++.||+|.+.....  ....+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence            457888999999999999999999999999999875432  234567899999999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      ||+++++|.+++..+.+++..++.++.||+.|+.|||++|++|+||+|+||+++.++.++|+|||++........  ...
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~  159 (277)
T cd06642          82 EYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRN  159 (277)
T ss_pred             EccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch--hhh
Confidence            999999999999888899999999999999999999999999999999999999999999999999876543211  122


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...|+..|+|||.+.+..+. .++|+||||+++|+|++|..||...........+... ....+..++.++.++|.+||.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSAYD-FKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLN  238 (277)
T ss_pred             cccCcccccCHHHhCcCCCc-hhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHcc
Confidence            34688999999999877654 7899999999999999999999876555444444333 233445578899999999999


Q ss_pred             CCCCCcCChhhhhcCcccccC
Q 012021          249 PNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       249 ~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .+|.+|||+.++++||||.+.
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         239 KDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             CCcccCcCHHHHHHhHHHHHH
Confidence            999999999999999999763


No 204
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00  E-value=3.4e-42  Score=336.86  Aligned_cols=248  Identities=32%  Similarity=0.529  Sum_probs=205.2

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeC--CEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASK--TKIYFV   88 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~--~~~~lV   88 (472)
                      |++.+.||+|+||.||+|.+..+++.||+|.+.+..... .. ....+|+.+++++. ||||+++++++.+.  +.+|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            789999999999999999999999999999986543211 11 23347888888885 99999999999887  899999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.+ +|.+.+..  +.+++..++.++.||+.||.|||++|++||||||+||+++. +.+||+|||++........  
T Consensus        79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--  154 (282)
T cd07831          79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--  154 (282)
T ss_pred             EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC--
Confidence            999975 77777654  56899999999999999999999999999999999999999 9999999999876543221  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------C
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------E  228 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------~  228 (472)
                       .....+++.|+|||.+...+..+.++|||||||++|+|++|..||...+..+.+..+...                  .
T Consensus       155 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (282)
T cd07831         155 -YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN  233 (282)
T ss_pred             -cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence             233568899999998766566668999999999999999999999887765544443211                  1


Q ss_pred             CCCC-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 FKFP-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ~~~~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +.+|           ..++.++.++|.+||.++|++|||++++++||||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            1121           2357899999999999999999999999999997


No 205
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00  E-value=2.7e-42  Score=341.34  Aligned_cols=256  Identities=29%  Similarity=0.511  Sum_probs=219.0

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||+|+||.||++.+..++..||+|.+.....   ...+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv   94 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV   94 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence            4699999999999999999999998999999999864432   2346788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      +||+++++|.+++.+..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........  ..
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~~  172 (293)
T cd06647          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KR  172 (293)
T ss_pred             EecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--cc
Confidence            9999999999999888899999999999999999999999999999999999999999999999998775443221  12


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-C--CCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-E--FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-~--~~~~~~~s~~l~~li~~  245 (472)
                      ....|++.|+|||.+....+ +.++|+||||+++|++++|+.||...+.......+... .  ...+..++..++++|.+
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~-~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  251 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  251 (293)
T ss_pred             ccccCChhhcCchhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHH
Confidence            34568999999999877665 47899999999999999999999876654433333222 1  22334467899999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccCC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ||..+|.+||++.+++.|+||+...
T Consensus       252 ~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         252 CLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HccCChhhCcCHHHHhcCHHHhcCc
Confidence            9999999999999999999998754


No 206
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00  E-value=6.8e-42  Score=332.35  Aligned_cols=251  Identities=30%  Similarity=0.555  Sum_probs=212.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|++..+++.||||.+.............+.+|+.+++.++||||+++++++.+.+..|+++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            68999999999999999999999999999999987644444455567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           90 EYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||+++++|.+++..     ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            99999999887742     4589999999999999999999999999999999999999999999999999876543221


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc--HHHHHHHHhccCC-CC-CCCCCHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN--LMEMYRKIGKAEF-KF-PNWFAPEVR  240 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~--~~~~~~~i~~~~~-~~-~~~~s~~l~  240 (472)
                        ......|++.|+|||.+.+..+. .++|+||||+++|+|++|..||....  .......+..... .. +..++..+.
T Consensus       162 --~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08228         162 --AAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLR  238 (267)
T ss_pred             --HHhcCCCCccccChhhhccCCCC-chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence              12345689999999999877664 78999999999999999999996543  2344444443332 22 234778899


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ++|.+||..+|++|||+.++++.
T Consensus       239 ~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         239 ELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHHCCCCcccCcCHHHHHHH
Confidence            99999999999999999999864


No 207
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00  E-value=4.1e-42  Score=347.64  Aligned_cols=257  Identities=29%  Similarity=0.447  Sum_probs=211.0

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      +.++|++.+.||.|+||.||+|.+..+|+.||+|.+.....   ...+.+.+|+.+++.++||||+++++++...     
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT   79 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence            45799999999999999999999999999999999866543   3446788999999999999999999876543     


Q ss_pred             ---------CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEee
Q 012021           83 ---------TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSD  152 (472)
Q Consensus        83 ---------~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~D  152 (472)
                               ...|+||||+. ++|.+.+..+.+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+|
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d  158 (342)
T cd07854          80 EDVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD  158 (342)
T ss_pred             cccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence                     36899999997 58888887788999999999999999999999999999999999999974 55789999


Q ss_pred             ccchhhhhcccC-CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---
Q 012021          153 FGLSALAESKHQ-DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---  228 (472)
Q Consensus       153 FGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---  228 (472)
                      ||++........ .+......|+..|+|||.+......+.++|||||||++|+|++|..||...+.......+....   
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (342)
T cd07854         159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV  238 (342)
T ss_pred             cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            999875532211 1112334688999999987654445589999999999999999999998766544443332110   


Q ss_pred             ----------------------C-----CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          229 ----------------------F-----KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       229 ----------------------~-----~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                            .     .+.+.++.++.+||.+||.+||.+|||+.+++.||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence                                  0     012346788999999999999999999999999999975


No 208
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00  E-value=4.7e-42  Score=336.00  Aligned_cols=255  Identities=20%  Similarity=0.282  Sum_probs=212.1

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA   80 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   80 (472)
                      .+..++|++.+.||+|+||.||.|.+..     ++..||+|.+.....  ......+.+|+.+++.++||||+++++++.
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   79 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            4567899999999999999999998752     457899999864332  123456889999999999999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhccC-----------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAKG-----------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~~-----------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      .++..++||||+.+++|.+++...           .++...+..++.|++.||.|||++|++||||||+||++++++.++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~  159 (277)
T cd05062          80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  159 (277)
T ss_pred             CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence            999999999999999999888541           256788999999999999999999999999999999999999999


Q ss_pred             EeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC
Q 012021          150 VSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE  228 (472)
Q Consensus       150 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~  228 (472)
                      |+|||++................+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05062         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF-TTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG  238 (277)
T ss_pred             ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCc-CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999875432211111123356788999999877665 489999999999999999 799998887777666655543


Q ss_pred             -CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          229 -FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       229 -~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                       ...+...++.+.+++.+||+.||++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         239 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             45667788999999999999999999999999864


No 209
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00  E-value=7.3e-42  Score=337.02  Aligned_cols=252  Identities=30%  Similarity=0.428  Sum_probs=204.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++......  .....+.+|+.+++.++|+||+++++++..+...|+||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            6899999999999999999999999999999998654322  22345678999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+. ++|.+.+..  +.+++..++.++.||+.||.|||++||+||||||+|||++.+++++|+|||++........  .
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~  159 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ--T  159 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC--C
Confidence            9996 566655543  5688999999999999999999999999999999999999999999999999875433221  1


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH-HHHHHHhc---------------cC---
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM-EMYRKIGK---------------AE---  228 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~-~~~~~i~~---------------~~---  228 (472)
                      .....+++.|+|||.+.+....+.++||||||+++|+|++|..||...+.. +...++..               ..   
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK  239 (291)
T ss_pred             CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence            234467999999999876543457899999999999999999999765432 22221110               00   


Q ss_pred             -----CCCCC---------CCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 -----FKFPN---------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 -----~~~~~---------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                           ...+.         ..++++.+++.+||..||.+|||+.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                 00000         125689999999999999999999999999998


No 210
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00  E-value=2.5e-42  Score=340.73  Aligned_cols=254  Identities=33%  Similarity=0.447  Sum_probs=212.7

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKIY   86 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~   86 (472)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++.++||||+++++++...  ...|
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            35799999999999999999999999999999999755432 23344667899999999999999999998877  8999


Q ss_pred             EEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           87 FVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      +||||+.+ +|.+++..  ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++....... 
T Consensus        83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-  160 (293)
T cd07843          83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-  160 (293)
T ss_pred             EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-
Confidence            99999975 88887754  358999999999999999999999999999999999999999999999999987654432 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-----------------
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-----------------  227 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-----------------  227 (472)
                       .......+++.|+|||.+.+....+.++|+||||+++|+|++|..||...+....+.++...                 
T Consensus       161 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (293)
T cd07843         161 -KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG  239 (293)
T ss_pred             -cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence             12234567899999999876655568899999999999999999999887665554443211                 


Q ss_pred             --------------CCCCCCC-CCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          228 --------------EFKFPNW-FAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       228 --------------~~~~~~~-~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                    ...++.. +++.+.++|.+||+.+|++|||+.|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                          0112222 58889999999999999999999999999998


No 211
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00  E-value=3.1e-42  Score=341.66  Aligned_cols=255  Identities=29%  Similarity=0.539  Sum_probs=218.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      -|+....||+|+||.||+|.+..+++.||+|.+.....   ...+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            35566789999999999999999999999999865432   234668899999999999999999999999999999999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      |+++++|...+....+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++........  ....
T Consensus        99 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~  176 (297)
T cd06659          99 FLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKS  176 (297)
T ss_pred             cCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccc
Confidence            99999999988778899999999999999999999999999999999999999999999999999875433221  1234


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---CCCCCCCCHHHHHHHhccc
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---FKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~s~~l~~li~~~L  247 (472)
                      .+|++.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+....   ...+..+++.+.++|.+||
T Consensus       177 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l  255 (297)
T cd06659         177 LVGTPYWMAPEVISRTPY-GTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERML  255 (297)
T ss_pred             eecCccccCHHHHccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHh
Confidence            678999999999977665 489999999999999999999998877666555554332   2233457889999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      ..+|.+||++.++++||||.+...
T Consensus       256 ~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         256 TREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             cCCcccCcCHHHHhhChhhccCCC
Confidence            999999999999999999987543


No 212
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00  E-value=4.4e-42  Score=332.64  Aligned_cols=246  Identities=33%  Similarity=0.616  Sum_probs=208.9

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHH-HhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVM-RLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il-~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      +.||+|+||.||+|.+..+|+.||+|++.+...........+..|..++ ...+||||+++++++..++.+|+||||++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5799999999999999999999999999765433223333445555544 456899999999999999999999999999


Q ss_pred             Ccccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           95 GELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        95 g~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      ++|.+++.. +.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....      .....|
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~  155 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVG  155 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCC
Confidence            999999865 6799999999999999999999999999999999999999999999999998875432      134468


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCC----CCCCCHHHHHHHhcccCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKF----PNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~----~~~~s~~l~~li~~~L~~  249 (472)
                      ++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+....+..+.......    +..+++++.++|.+||+.
T Consensus       156 ~~~y~~pe~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  234 (260)
T cd05611         156 TPDYLAPETILGVGD-DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM  234 (260)
T ss_pred             CcCccChhhhcCCCC-cchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccC
Confidence            899999999877664 589999999999999999999999888877777766554433    334789999999999999


Q ss_pred             CCCCcCC---hhhhhcCccccc
Q 012021          250 NPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       250 dP~~Rpt---~~eil~h~~f~~  268 (472)
                      ||++||+   ++|++.||||++
T Consensus       235 ~p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         235 DPAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             CHHHccCCCcHHHHHcChHhhc
Confidence            9999994   579999999975


No 213
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00  E-value=1.2e-41  Score=335.18  Aligned_cols=254  Identities=28%  Similarity=0.509  Sum_probs=219.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|.-.+.||+|++|.||++.+..+++.+|+|.++....   ...+.+.+|+.+++.++||||+++++++...+..|+++|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e   96 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME   96 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence            56667899999999999999999999999999864432   234568899999999999999999999999999999999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                      |+.|++|.+++..+++++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++........  ....
T Consensus        97 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~  174 (285)
T cd06648          97 FLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RRKS  174 (285)
T ss_pred             ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--cccc
Confidence            99999999999888899999999999999999999999999999999999999999999999998775433221  1234


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCC---CCCCCHHHHHHHhccc
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKF---PNWFAPEVRRLLSKIL  247 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~---~~~~s~~l~~li~~~L  247 (472)
                      ..|++.|+|||.+.+..+. .++||||+|+++|+|++|..||...+....+..+.......   +..+++.+.++|.+||
T Consensus       175 ~~~~~~y~aPE~~~~~~~~-~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  253 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYG-TEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRML  253 (285)
T ss_pred             ccCCccccCHHHhcCCCCC-CcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHc
Confidence            5689999999998776654 78999999999999999999998887776666665543222   2337889999999999


Q ss_pred             CCCCCCcCChhhhhcCcccccCC
Q 012021          248 DPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ..+|++|||+.++++||||++..
T Consensus       254 ~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         254 VRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             ccChhhCcCHHHHccCcccccCC
Confidence            99999999999999999998743


No 214
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00  E-value=7.3e-42  Score=336.91  Aligned_cols=259  Identities=20%  Similarity=0.291  Sum_probs=213.3

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA   80 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   80 (472)
                      .+..++|++.+.||+|+||.||+|.++.     .+..||+|.+......  .....+.+|+.+++.++||||+++++++.
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   79 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVVS   79 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            3456799999999999999999997652     3558999998654321  23345778999999999999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhcc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK-----------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~-----------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      +.+..|+||||+.+|+|.+++..           ..++...+..++.||+.||.|||++||+||||||+|||++.++.++
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence            99999999999999999999853           1246678899999999999999999999999999999999999999


Q ss_pred             EeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-
Q 012021          150 VSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-  227 (472)
Q Consensus       150 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-  227 (472)
                      |+|||+++...............++..|+|||.+.+..+ +.++|+|||||++|+|++ |..||......+....+..+ 
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~-~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  238 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF-TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG  238 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCC-ChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999875433221111122345778999999876665 479999999999999998 79999887777766666544 


Q ss_pred             CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc------Ccccc
Q 012021          228 EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME------NSWFR  267 (472)
Q Consensus       228 ~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~------h~~f~  267 (472)
                      ....+...++++.+++.+||+.||++|||+.++++      ||||+
T Consensus       239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~  284 (288)
T cd05061         239 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP  284 (288)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence            34556677899999999999999999999999987      77775


No 215
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00  E-value=1e-41  Score=336.54  Aligned_cols=257  Identities=31%  Similarity=0.460  Sum_probs=210.6

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +++|++.+.||+|++|+||+|.+..+|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++.+...+|+|
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence            36899999999999999999999999999999998654322 23346788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-C--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccchhhhhcccC
Q 012021           89 MEYVKGGELFGKVAK-G--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla~~~~~~~~  164 (472)
                      |||+.+ +|.+.+.. .  .+++..++.++.||+.||.|||++|++||||+|+||+++. ++.+||+|||++....... 
T Consensus        80 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-  157 (294)
T PLN00009         80 FEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-  157 (294)
T ss_pred             Eecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-
Confidence            999964 67666643 2  3688999999999999999999999999999999999985 4579999999987543321 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC----------------
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE----------------  228 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~----------------  228 (472)
                       .......+++.|+|||.+.+....+.++||||||+++|+|++|..||...+..+.+.++....                
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (294)
T PLN00009        158 -RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD  236 (294)
T ss_pred             -cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence             112344678999999998765545589999999999999999999998776554444332100                


Q ss_pred             -----CC--------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          229 -----FK--------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       229 -----~~--------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                           ..        ..+.+++++.++|.+||+.+|++||++.++++||||...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence                 00        113467889999999999999999999999999999863


No 216
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00  E-value=6.2e-42  Score=330.24  Aligned_cols=252  Identities=31%  Similarity=0.598  Sum_probs=216.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|+||.||++.+..+|..||+|.+...... ....+.+.+|+.+++.++||||+++++.+......|+|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence            699999999999999999999999999999999765332 2334678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC-EEEeeccchhhhhcccCCC
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN-LKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~-vkl~DFGla~~~~~~~~~~  166 (472)
                      |+++++|.+++..   ..+++..+..++.|++.||.|||++|++|+||||+||++++++. ++|+|||.+........  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--  157 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME--  157 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc--
Confidence            9999999998864   25899999999999999999999999999999999999998864 69999999876543221  


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhc
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSK  245 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~  245 (472)
                      ......|++.|+|||++....+. .++|+||||+++++|++|..||...+.......+..... ..++.++.++.++|.+
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  236 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYN-NKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQ  236 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHH
Confidence            22344689999999998766554 789999999999999999999988777666665554433 3455678899999999


Q ss_pred             ccCCCCCCcCChhhhhcCccc
Q 012021          246 ILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ||..+|++|||+.+++.||||
T Consensus       237 ~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         237 LFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HhccChhhCcCHHHHhhCCCC
Confidence            999999999999999999997


No 217
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=4.1e-42  Score=337.83  Aligned_cols=255  Identities=27%  Similarity=0.454  Sum_probs=216.0

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++++.||+|+||+||++.+..+|+.||+|++....  .....+.+.+|+.+++.++||||+++++++...+.+|+|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence            468999999999999999999999999999999986543  223457789999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+++++|.+++.. +.+++..+..++.+++.||.|||+ +|++||||||+||+++.++.++|+|||++.......   
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~---  158 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI---  158 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence            999999999988865 679999999999999999999997 699999999999999999999999999986543221   


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH-----------HHHHHHhcc-CCCCCCC
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM-----------EMYRKIGKA-EFKFPNW  234 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~-----------~~~~~i~~~-~~~~~~~  234 (472)
                       ....+|+..|+|||++.+..+ +.++|||||||++|+|++|..||......           +....+... ...++..
T Consensus       159 -~~~~~~~~~~~aPE~~~~~~~-~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd06620         159 -ADTFVGTSTYMSPERIQGGKY-TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS  236 (284)
T ss_pred             -cCccccCcccCCHHHHccCCC-CccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCch
Confidence             234578999999999876655 47899999999999999999999865431           223333322 2233333


Q ss_pred             -CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          235 -FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       235 -~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                       ++.++.+||.+||+.||.+|||+.|+++|+||.+..
T Consensus       237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             hcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence             778999999999999999999999999999997643


No 218
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=8.1e-42  Score=335.34  Aligned_cols=252  Identities=23%  Similarity=0.359  Sum_probs=211.5

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEc----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNL----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ...|++.+.||+|+||+||+|.+.    .++..||+|.+....  .......+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   81 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP   81 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence            467999999999999999999853    456789999986533  22334678899999999999999999999999999


Q ss_pred             EEEEEEecCCCcccchhcc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC
Q 012021           85 IYFVMEYVKGGELFGKVAK------------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG  146 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~------------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g  146 (472)
                      .|+||||+.+++|.+++..                  ..+++..+..++.||+.||.|||++|++||||||+|||++.++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence            9999999999999988742                  2478899999999999999999999999999999999999999


Q ss_pred             CEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHh
Q 012021          147 NLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIG  225 (472)
Q Consensus       147 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~  225 (472)
                      .+||+|||++................++..|+|||.+.+..+ +.++||||||+++|+|++ |..||.+.+.......+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~  240 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF-SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR  240 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            999999999876543222222234456778999999876665 489999999999999998 999998877666555554


Q ss_pred             cc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          226 KA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       226 ~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .. ....+..+++++.+++.+||+.||.+||++.+|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         241 KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            43 345667789999999999999999999999999865


No 219
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=100.00  E-value=8e-42  Score=336.63  Aligned_cols=250  Identities=26%  Similarity=0.396  Sum_probs=212.0

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ..+|.+.+.||+|+||+||++.+.     .++..+|+|.+....   ......+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   80 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            457999999999999999999853     345679999986542   234567899999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           84 KIYFVMEYVKGGELFGKVAK--------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      .+|+||||+++++|.+++..              ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            99999999999999988853              2489999999999999999999999999999999999999999999


Q ss_pred             EeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC
Q 012021          150 VSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE  228 (472)
Q Consensus       150 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~  228 (472)
                      |+|||++................+++.|+|||.+.+..+. .++|||||||++|+|++ |..||...+.......+..+.
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~  239 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR  239 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999998755332211112234467889999998776554 79999999999999998 999998888777777777665


Q ss_pred             -CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          229 -FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       229 -~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                       ...+..+++++.+++.+||++||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         240 VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             3455668899999999999999999999999964


No 220
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00  E-value=1.1e-41  Score=330.87  Aligned_cols=251  Identities=25%  Similarity=0.434  Sum_probs=215.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +....|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+.+|+.+++.++||||+++++++..++.+|
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   78 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence            34567999999999999999999999999999999986543    22456889999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++|||+++++|.+++..   ..+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~  158 (263)
T cd05052          79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  158 (263)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence            99999999999998854   358999999999999999999999999999999999999999999999999987654322


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      ... .....+++.|+|||.+.+..+. .++|||||||++|+|++ |..||.+.+..+.+..+... ....|..+++++.+
T Consensus       159 ~~~-~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
T cd05052         159 YTA-HAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYE  236 (263)
T ss_pred             eec-cCCCCCccccCCHHHhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
Confidence            111 1122345679999998776664 78999999999999998 99999988777777776654 45667778999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcC
Q 012021          242 LLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +|.+||..||++|||+.++++.
T Consensus       237 li~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         237 LMRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             HHHHHccCCcccCCCHHHHHHH
Confidence            9999999999999999999763


No 221
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=100.00  E-value=1.1e-41  Score=332.80  Aligned_cols=254  Identities=22%  Similarity=0.310  Sum_probs=214.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKT-----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS   81 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   81 (472)
                      +..++|++.+.||+|+||.||++.+...     +..||+|.+.....  ......+.+|+.+++.++||||+++++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVST   80 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence            5678999999999999999999998644     47899999865432  2334567899999999999999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhcc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEE
Q 012021           82 KTKIYFVMEYVKGGELFGKVAK-----------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKV  150 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~-----------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl  150 (472)
                      ....|+||||+++++|.+++..           +.+++..+..++.||+.||.|||++|++||||||+|||++.++.+||
T Consensus        81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032          81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence            9999999999999999988753           23678899999999999999999999999999999999999999999


Q ss_pred             eeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-C
Q 012021          151 SDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-E  228 (472)
Q Consensus       151 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~  228 (472)
                      +|||+++...............++..|+|||.+....+ +.++|||||||++|++++ |..||.+.+.......+... .
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  239 (277)
T cd05032         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF-TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH  239 (277)
T ss_pred             CCcccchhhccCcccccCCCCCccccccCHHHHhcCCC-CcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCC
Confidence            99999876543322122234567889999999876655 488999999999999998 99999887777666666543 3


Q ss_pred             CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          229 FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       229 ~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ...|..++.++.++|.+||..+|++|||+.++++.
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            45677789999999999999999999999999863


No 222
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00  E-value=3.9e-42  Score=336.40  Aligned_cols=251  Identities=25%  Similarity=0.372  Sum_probs=213.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.+.....  ....+.+.+|+.+++.++||||+++++++....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   81 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGD   81 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence            4679999999999999999998753     468899999865432  234578899999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCE
Q 012021           84 KIYFVMEYVKGGELFGKVAK---------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~---------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~v  148 (472)
                      ..|+||||+++++|.+++..               ..+++..+..++.||+.|+.|||++|++||||||+||+++.++.+
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence            99999999999999988853               247889999999999999999999999999999999999999999


Q ss_pred             EEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc
Q 012021          149 KVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA  227 (472)
Q Consensus       149 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~  227 (472)
                      +|+|||++................+++.|+|||++.+..+. .++|||||||++|+|++ |..||...+.......+..+
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~  240 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG  240 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcc-hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            99999998754322211112334567889999999777664 78999999999999998 99999888877777777665


Q ss_pred             CC-CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          228 EF-KFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       228 ~~-~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .. ..+..++.++.+++.+||..||++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         241 RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            54 345568899999999999999999999999986


No 223
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00  E-value=1.1e-41  Score=333.72  Aligned_cols=255  Identities=26%  Similarity=0.459  Sum_probs=205.2

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHH-HHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISV-MRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+.......  ....+..|+.+ ++.++||||+++++++..++..|++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv   78 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC   78 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence            47999999999999999999999999999999987653221  12344456554 6778999999999999999999999


Q ss_pred             EEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           89 MEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |||++ ++|.+.+..     ..+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            99997 466555432     4689999999999999999999998 9999999999999999999999999998765322


Q ss_pred             cCCCccccccCCCcccChhhhccc---CCCCCcccchhhhHHHHHHhcCCCCCCCC-cHHHHHHHHh-ccCCCCC-CCCC
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRR---GYDGSKADIWSCGVILYVLLAGYLPFHDS-NLMEMYRKIG-KAEFKFP-NWFA  236 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil~~lltG~~Pf~~~-~~~~~~~~i~-~~~~~~~-~~~s  236 (472)
                      .   ......|+..|+|||.+.+.   ...+.++|+|||||++|+|++|..||... ...+.+..+. .....+| ..++
T Consensus       158 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd06617         158 V---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFS  234 (283)
T ss_pred             c---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccC
Confidence            1   11235689999999988542   11247899999999999999999999753 2223333332 2333444 3478


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      .++.++|.+||..+|.+|||+.++++||||++..
T Consensus       235 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         235 PEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            9999999999999999999999999999998743


No 224
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=100.00  E-value=1.6e-41  Score=326.20  Aligned_cols=252  Identities=35%  Similarity=0.635  Sum_probs=221.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||.|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++|||++++++.+......++|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence            699999999999999999999989999999999765432 2445678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           91 YVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        91 ~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |+++++|.+.+..     +.+++..+..++.|++.||.|||++|++|+||+|+||+++.+++++|+|||++.......  
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--  157 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--  157 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence            9999999988864     569999999999999999999999999999999999999999999999999987654432  


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHh
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLS  244 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~  244 (472)
                      .......|++.|+|||.+....+. .++|+||+|+++++|++|..||...+.......+.... ..+|..++.++.+++.
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  236 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYN-YKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVS  236 (258)
T ss_pred             ceecceeeeecccChhHhccCCCC-ccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            123445789999999998776654 78999999999999999999998887777666665543 3456678899999999


Q ss_pred             cccCCCCCCcCChhhhhcCccc
Q 012021          245 KILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +||..+|.+|||+.++++||||
T Consensus       237 ~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         237 SLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHcCCChhhCcCHHHHhcCCCC
Confidence            9999999999999999999997


No 225
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00  E-value=4.5e-42  Score=347.45  Aligned_cols=256  Identities=28%  Similarity=0.435  Sum_probs=216.0

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE--
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK--   84 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--   84 (472)
                      .+.++|++.+.||+|+||.||+|++..+++.||+|++...... ......+.+|+.+++.++||||+++++++...+.  
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE   90 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence            3677999999999999999999999999999999998654322 2334667789999999999999999998765544  


Q ss_pred             ----EEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           85 ----IYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        85 ----~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                          .|+|+||+ +++|.+++..+++++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus        91 ~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          91 DFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             ccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence                89999999 6799999888889999999999999999999999999999999999999999999999999987653


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-----------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-----------  229 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-----------  229 (472)
                      ..     .....+++.|+|||.+.+....+.++||||||+++|+|++|+.||.+.+....+..+.....           
T Consensus       170 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  244 (343)
T cd07851         170 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKIS  244 (343)
T ss_pred             cc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcc
Confidence            22     23457889999999986644456899999999999999999999988776655554432110           


Q ss_pred             --------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          230 --------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       230 --------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                          .....+++++.++|.+||.+||++|||+.+|+.||||++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence                                0112358899999999999999999999999999999864


No 226
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00  E-value=4.9e-42  Score=336.46  Aligned_cols=251  Identities=32%  Similarity=0.481  Sum_probs=209.3

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |++.+.||.|++|.||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..|++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence            78899999999999999999999999999999765422 23345678899999999999999999999999999999999


Q ss_pred             cCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           92 VKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        92 ~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      +. ++|.+++...   .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++........  ..
T Consensus        80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~  156 (283)
T cd07835          80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--TY  156 (283)
T ss_pred             cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--cc
Confidence            95 5888887653   589999999999999999999999999999999999999999999999999875432211  12


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--------------------
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--------------------  228 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--------------------  228 (472)
                      ....+++.|+|||++.+....+.++|+||||+++|+|++|..||...+......++....                    
T Consensus       157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07835         157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT  236 (283)
T ss_pred             CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence            334578899999988765444578999999999999999999998776544333322110                    


Q ss_pred             ---------CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 ---------FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ---------~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                               ......+++++.++|.+||++||.+|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                     01123467899999999999999999999999999998


No 227
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=100.00  E-value=5.9e-42  Score=340.96  Aligned_cols=255  Identities=29%  Similarity=0.449  Sum_probs=205.6

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcC--CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLK--TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKIY   86 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~   86 (472)
                      +|++.+.||+|+||.||+|.+..  +++.||+|.+.............+.+|+.+++.++||||+++++++.+.  ..+|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            69999999999999999999988  8999999999874422234456778999999999999999999999888  8899


Q ss_pred             EEEEecCCCcccchhc-----c-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC----CCCEEEeeccch
Q 012021           87 FVMEYVKGGELFGKVA-----K-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE----HGNLKVSDFGLS  156 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~-----~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~----~g~vkl~DFGla  156 (472)
                      +||||+.+ +|.+.+.     . +.+++..++.++.||+.||.|||++||+||||||+||+++.    ++.+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999975 5555442     1 36899999999999999999999999999999999999999    899999999998


Q ss_pred             hhhhcccC-CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH---------HHHHH--
Q 012021          157 ALAESKHQ-DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME---------MYRKI--  224 (472)
Q Consensus       157 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~---------~~~~i--  224 (472)
                      ........ .......++|+.|+|||++.+....+.++||||||+++++|++|+.||.......         ....+  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            86543322 1112345789999999998765544588999999999999999999997543211         00000  


Q ss_pred             ------------------------hccCCCCC-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          225 ------------------------GKAEFKFP-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       225 ------------------------~~~~~~~~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                              ......++           ...+.++.++|.+||++||++|||+.++++||||
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                                    00001111           1456789999999999999999999999999998


No 228
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00  E-value=1.5e-41  Score=328.54  Aligned_cols=254  Identities=32%  Similarity=0.554  Sum_probs=220.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|++.+.||.|++|.||+|.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++++......|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL   78 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence            4699999999999999999999999999999998765421  34577899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+++++|.+++.. +.+++..++.++.||+.|+.|||+ .|++||||+|+||+++.++.++|+|||++.........  
T Consensus        79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--  156 (264)
T cd06623          79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--  156 (264)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc--
Confidence            99999999999975 789999999999999999999999 99999999999999999999999999998765433221  


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC---cHHHHHHHHhcc-CCCCCCC-CCHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS---NLMEMYRKIGKA-EFKFPNW-FAPEVRRL  242 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~---~~~~~~~~i~~~-~~~~~~~-~s~~l~~l  242 (472)
                      .....++..|+|||.+....+ +.++|+||||+++|+|++|..||...   ........+... ....+.. ++..+.++
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  235 (264)
T cd06623         157 CNTFVGTVTYMSPERIQGESY-SYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDF  235 (264)
T ss_pred             ccceeecccccCHhhhCCCCC-CchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence            234568899999999876644 58999999999999999999999776   444555554433 3445555 78999999


Q ss_pred             HhcccCCCCCCcCChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      |.+||.++|+.|||+.++++||||+.
T Consensus       236 i~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         236 ISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHHccCChhhCCCHHHHHhCHHHHh
Confidence            99999999999999999999999975


No 229
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00  E-value=2e-41  Score=325.19  Aligned_cols=254  Identities=31%  Similarity=0.568  Sum_probs=219.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKIYFV   88 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~lV   88 (472)
                      +|++.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.++++++||||+++++.+...  ..+|++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            589999999999999999999999999999999766532 34567889999999999999999999999988  899999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +||+.+++|.+++.. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  159 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG  159 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence            999999999999876 4899999999999999999999999999999999999999999999999999887655432111


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHh--ccCCCCCCCCCHHHHHHHh
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIG--KAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~--~~~~~~~~~~s~~l~~li~  244 (472)
                      .....++..|+|||.+....+ +.++||||||+++|+|++|..||.... .......+.  ......|..++.++.++|.
T Consensus       160 ~~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  238 (260)
T cd06606         160 TGSVRGTPYWMAPEVIRGEEY-GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLR  238 (260)
T ss_pred             ccCCCCCccccCHhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHH
Confidence            344678999999999876654 489999999999999999999998765 333333333  2344567778999999999


Q ss_pred             cccCCCCCCcCChhhhhcCccc
Q 012021          245 KILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +||..||.+||++.+++.||||
T Consensus       239 ~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         239 KCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HhCcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999997


No 230
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00  E-value=8.1e-42  Score=341.37  Aligned_cols=251  Identities=22%  Similarity=0.349  Sum_probs=209.6

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcE----EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMS----VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ..+|++.+.||+|+||+||+|.+..+++.    ||+|++....  .......+.+|+.+++.++||||+++++++... .
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            45899999999999999999998766664    8999986432  223456788999999999999999999998765 5


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .++++||+.+|+|.+++..  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~  162 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD  162 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence            7899999999999999875  36899999999999999999999999999999999999999999999999999866433


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ..........++..|+|||.+.+..+. .++||||||+++|+|++ |..||.+....+....+... ....+..++.++.
T Consensus       163 ~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (316)
T cd05108         163 EKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY  241 (316)
T ss_pred             CcceeccCCccceeecChHHhccCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence            221112223456789999999777665 89999999999999997 99999887766554444333 3455667889999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +++.+||..+|.+|||+.+++.+
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999986


No 231
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00  E-value=5.2e-45  Score=342.56  Aligned_cols=251  Identities=28%  Similarity=0.508  Sum_probs=221.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      -|.++.+||+|+||.||+|+++.+|+.+|||.+.-+.     .+..+.+||.||++++.|++|++|+.+...+.+|+|||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence            3678899999999999999999999999999986553     35778899999999999999999999999999999999


Q ss_pred             ecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||..|+..+.++  +.+++|.++..+++..+.||+|||...-+|||||..||||+.+|..||+|||.|.........  -
T Consensus       109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK--R  186 (502)
T KOG0574|consen  109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK--R  186 (502)
T ss_pred             hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh--h
Confidence            999999999886  368999999999999999999999999999999999999999999999999998765433221  3


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---CCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~s~~l~~li~~  245 (472)
                      .+..|||.|||||++..-+|+ .++||||||++..||..|++||.+..++...--|-...   +.-|..+|.++.+||++
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~-~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~  265 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYD-TKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRS  265 (502)
T ss_pred             CccccCcccccHHHHHHhccc-hhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHH
Confidence            578899999999999999998 68999999999999999999998877765443333322   23345578899999999


Q ss_pred             ccCCCCCCcCChhhhhcCcccccC
Q 012021          246 ILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ||..+|++|.|+-++++|||+++.
T Consensus       266 CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  266 CLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HhcCCHHHHHHHHHHhhhhhhcCC
Confidence            999999999999999999999863


No 232
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=2e-44  Score=390.41  Aligned_cols=259  Identities=32%  Similarity=0.573  Sum_probs=226.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .-||+-+.+||.|.||.||-|.+..+|+..|+|-+.-.... ......+.+|..++..++|||+|++|++-...+..||.
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            44889999999999999999999999999999998766544 45668899999999999999999999999999999999


Q ss_pred             EEecCCCcccchhccCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc--CC
Q 012021           89 MEYVKGGELFGKVAKGK-LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH--QD  165 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~-l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~--~~  165 (472)
                      ||||+||+|.+.++.|+ .+|...+.|..|++.|+.|||++||+||||||+||+|+.+|.+|++|||.|..+....  -.
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence            99999999999998864 7788888899999999999999999999999999999999999999999987665432  23


Q ss_pred             CccccccCCCcccChhhhcccCC--CCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGY--DGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      +.+....|||.|||||++.+..-  .+.++||||||||+.||+||+.||...+ ...+..++..+ .+++|..+|++.++
T Consensus      1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred             HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHH
Confidence            45667889999999999976432  2468999999999999999999997643 33444455544 57889999999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCccccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ||.+||+.||++|.++.||++|.|-+.
T Consensus      1473 Fle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             HHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            999999999999999999999988754


No 233
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=100.00  E-value=2.5e-41  Score=324.81  Aligned_cols=252  Identities=33%  Similarity=0.601  Sum_probs=221.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|++|.||++.+..+++.||+|.+...... ....+.+.+|+.+++.++|||++++++++.+....|++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            699999999999999999999999999999999776532 2456789999999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           91 YVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        91 ~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      |+++++|.+++.. +.+++..++.++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.........  ..
T Consensus        80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~  157 (254)
T cd06627          80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DA  157 (254)
T ss_pred             cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--cc
Confidence            9999999998865 68999999999999999999999999999999999999999999999999998866543221  23


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh-ccCCCCCCCCCHHHHHHHhcccC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG-KAEFKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~-~~~~~~~~~~s~~l~~li~~~L~  248 (472)
                      ...|+..|+|||.+.+..+ +.++||||||+++++|++|..||...+......++. .....++..+++.+.++|.+||.
T Consensus       158 ~~~~~~~y~~pe~~~~~~~-~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  236 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQ  236 (254)
T ss_pred             ccccchhhcCHhhhcCCCC-CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHh
Confidence            4578999999999876664 588999999999999999999998766554444443 34455677789999999999999


Q ss_pred             CCCCCcCChhhhhcCccc
Q 012021          249 PNPNTRISMTKIMENSWF  266 (472)
Q Consensus       249 ~dP~~Rpt~~eil~h~~f  266 (472)
                      .+|++|||+.+++.||||
T Consensus       237 ~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         237 KDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997


No 234
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00  E-value=1.5e-41  Score=337.80  Aligned_cols=257  Identities=27%  Similarity=0.424  Sum_probs=216.2

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .....+|++.+.||+|+||+||+|.+..+|+.||+|.+.............+.+|+.+++.++||||+++++++...+..
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~   90 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA   90 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence            44567899999999999999999999999999999998765444444556788999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+||||+.| +|.+.+.  .+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++...... 
T Consensus        91 ~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-  168 (307)
T cd06607          91 WLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-  168 (307)
T ss_pred             EEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence            999999975 5655553  357999999999999999999999999999999999999999999999999988654321 


Q ss_pred             CCCccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCC-CCCCCHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKF-PNWFAPEV  239 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~-~~~~s~~l  239 (472)
                           ....|++.|+|||++..  .+..+.++||||||+++|+|++|..||...+.......+.... ... +..++.++
T Consensus       169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (307)
T cd06607         169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYF  243 (307)
T ss_pred             -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHH
Confidence                 24568899999998742  2334578999999999999999999998877665544444332 222 23467899


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .++|.+||..||++||++.+|+.||||...
T Consensus       244 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         244 RNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999999864


No 235
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00  E-value=1.9e-41  Score=329.51  Aligned_cols=252  Identities=23%  Similarity=0.368  Sum_probs=213.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .++|++.+.||+|+||+||+|.+..+   ...||+|.+.....  ......+.+|+.+++.++||||+++++++...+..
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV   80 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence            46799999999999999999998654   45899999865432  23446688899999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |++|||+++++|.+++..  +.+++..++.++.|++.||.|||++||+||||||+|||+++++.++|+|||++.......
T Consensus        81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            999999999999999865  579999999999999999999999999999999999999999999999999998765221


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      .........+++.|+|||.+.+..+. .++||||||+++|+|++ |..||...........+... ....+...++.+.+
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~-~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  239 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFT-SASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQ  239 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCc-cccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            11111123456789999998776654 79999999999999998 99999887777666666554 33455668999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcC
Q 012021          242 LLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ++.+||+.+|++||++.+++++
T Consensus       240 li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         240 LMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999875


No 236
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00  E-value=1.3e-41  Score=330.85  Aligned_cols=250  Identities=26%  Similarity=0.397  Sum_probs=208.7

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE----
Q 012021           12 YELGRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK----   84 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~----   84 (472)
                      |++++.||+|+||.||.|....+   +..||+|.+...... ....+.+.+|+.+++.++||||+++++++.....    
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence            67899999999999999987653   478999998754332 2345678999999999999999999998865544    


Q ss_pred             --EEEEEEecCCCcccchhcc-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           85 --IYFVMEYVKGGELFGKVAK-------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        85 --~~lV~E~~~gg~L~~~i~~-------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                        .+++|||+++++|..++..       ..+++..++.++.|++.||.|||++|++||||||+||++++++.+||+|||+
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence              8999999999999887732       3589999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCC
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPN  233 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~  233 (472)
                      +................++..|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+..+.+..+..+ ....|.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  238 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY-TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE  238 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            876543222111222345678999999876655 489999999999999999 99999888777777666544 455677


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+++++.+++.+||+.||++|||+.+++++
T Consensus       239 ~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         239 DCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            789999999999999999999999999875


No 237
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=100.00  E-value=1e-41  Score=328.53  Aligned_cols=244  Identities=26%  Similarity=0.446  Sum_probs=204.1

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||+|.+..+++.||+|.+....  .......+.+|+.+++.++||||+++++++......|+||||+.++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            46999999999999999999999999886432  2344567899999999999999999999999999999999999999


Q ss_pred             cccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           96 ELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        96 ~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      +|.+++..  ..+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++................+
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence            99999864  3589999999999999999999999999999999999999999999999999875432111100111123


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNP  251 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP  251 (472)
                      +..|+|||.+.+..+ +.++||||||+++|+|++ |..||...........+... ....+..++..+.+++.+||..+|
T Consensus       159 ~~~y~aPE~~~~~~~-~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         159 PVKWTAPEALNYGRY-SSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             ceeecCchhhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCCh
Confidence            456999999876665 478999999999999997 99999877665555555433 445666788999999999999999


Q ss_pred             CCcCChhhhhc
Q 012021          252 NTRISMTKIME  262 (472)
Q Consensus       252 ~~Rpt~~eil~  262 (472)
                      ++|||+.++++
T Consensus       238 ~~Rps~~~~~~  248 (252)
T cd05084         238 GQRPSFSTVHQ  248 (252)
T ss_pred             hhCcCHHHHHH
Confidence            99999999975


No 238
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00  E-value=7.3e-42  Score=344.98  Aligned_cols=257  Identities=28%  Similarity=0.432  Sum_probs=211.1

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      +.++|++.+.||+|+||+||+|++..+++.||||.+....... .....+.+|+.+++.++||||+++++++...     
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence            4578999999999999999999999999999999987543222 2345677899999999999999999987544     


Q ss_pred             CEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ...|+|+||+. ++|.+++.. +.+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            35899999995 578877765 6899999999999999999999999999999999999999999999999999876543


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--------------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--------------  227 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--------------  227 (472)
                      ..  .......++..|+|||.+......+.++|||||||++|+|++|+.||...+....+..+...              
T Consensus       161 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T cd07858         161 KG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN  238 (337)
T ss_pred             Cc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence            21  22344578999999999865444568999999999999999999999876543322222100              


Q ss_pred             --------------CC---CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          228 --------------EF---KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       228 --------------~~---~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                                    ..   ...+.+++++.++|.+||+.+|++|||++++++||||..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence                          00   112347889999999999999999999999999999975


No 239
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00  E-value=9.4e-42  Score=337.57  Aligned_cols=259  Identities=28%  Similarity=0.511  Sum_probs=213.4

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-   83 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-   83 (472)
                      |.+..++|++.+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.++||||+++++++.+.. 
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~   80 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD   80 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcch
Confidence            677889999999999999999999999999999999999754322 123356778999999999999999999986654 


Q ss_pred             ---------EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEee
Q 012021           84 ---------KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSD  152 (472)
Q Consensus        84 ---------~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~D  152 (472)
                               .+|+|+||+++ +|.+.+..  ..+++..++.++.||+.||.|||+.||+||||||+||++++++.+||+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence                     89999999976 56666654  4699999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---
Q 012021          153 FGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---  229 (472)
Q Consensus       153 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---  229 (472)
                      ||++........ .......+++.|+|||.+.+....+.++|||||||++++|++|+.||...+.......+.....   
T Consensus       160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T cd07864         160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC  238 (302)
T ss_pred             ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            999876543221 1122335688899999886655456899999999999999999999987766555444432100   


Q ss_pred             ---------------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 ---------------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 ---------------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                                 .....+++.+.++|.+||..||.+|||+.++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                       0012367899999999999999999999999999997


No 240
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00  E-value=1e-41  Score=338.71  Aligned_cols=251  Identities=25%  Similarity=0.419  Sum_probs=208.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcE--EEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMS--VAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKT   83 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~--vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   83 (472)
                      +-.++|++.+.||+|+||.||+|.+..++..  +|+|.+...  ........+.+|+.++.++ +||||+++++++...+
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~   81 (303)
T cd05088           4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   81 (303)
T ss_pred             cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence            3457899999999999999999999888765  466665432  2223456788999999999 8999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC
Q 012021           84 KIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG  146 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g  146 (472)
                      .+|+||||+++++|.+++..                 ..+++..++.++.||+.||+|||++|++||||||+|||++.++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~  161 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  161 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence            99999999999999988853                 2478999999999999999999999999999999999999999


Q ss_pred             CEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHh
Q 012021          147 NLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIG  225 (472)
Q Consensus       147 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~  225 (472)
                      .+||+|||++........   .....++..|+|||.+.+..+ +.++|||||||++|+|+| |..||...+..+.+..+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  237 (303)
T cd05088         162 VAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  237 (303)
T ss_pred             cEEeCccccCcccchhhh---cccCCCcccccCHHHHhccCC-cccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence            999999999863321111   111234667999999876654 479999999999999998 999998877777666665


Q ss_pred             cc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          226 KA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       226 ~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .. ....+..+++++.++|.+||+.+|++||++++++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         238 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            44 234455578999999999999999999999999876


No 241
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00  E-value=4.2e-42  Score=347.11  Aligned_cols=255  Identities=25%  Similarity=0.441  Sum_probs=207.1

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVM   79 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~   79 (472)
                      .+-.+||++++.||+|+||.||+|++..     +++.||+|++.....  ....+.+.+|+.+++++ +||||+++++++
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence            4556799999999999999999997543     457899999865432  23346678899999999 799999999987


Q ss_pred             Ee-CCEEEEEEEecCCCcccchhcc-------------------------------------------------------
Q 012021           80 AS-KTKIYFVMEYVKGGELFGKVAK-------------------------------------------------------  103 (472)
Q Consensus        80 ~~-~~~~~lV~E~~~gg~L~~~i~~-------------------------------------------------------  103 (472)
                      .. +..+|++|||+++++|.+++..                                                       
T Consensus        81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
T cd05054          81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE  160 (337)
T ss_pred             ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence            54 4678999999999999887742                                                       


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCc
Q 012021          104 -------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPA  176 (472)
Q Consensus       104 -------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~  176 (472)
                             ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++................++..
T Consensus       161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd05054         161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  240 (337)
T ss_pred             hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence                   2578899999999999999999999999999999999999999999999999986543222111223456778


Q ss_pred             ccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHH-HHHhcc-CCCCCCCCCHHHHHHHhcccCCCCCC
Q 012021          177 YVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMY-RKIGKA-EFKFPNWFAPEVRRLLSKILDPNPNT  253 (472)
Q Consensus       177 y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~-~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~~  253 (472)
                      |+|||++.+..+. .++|||||||++|+|++ |..||.+....+.. ..+... ....|...++++.+++.+||+.+|++
T Consensus       241 y~aPE~~~~~~~~-~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  319 (337)
T cd05054         241 WMAPESIFDKVYT-TQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPED  319 (337)
T ss_pred             ccCcHHhcCCCCC-ccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhh
Confidence            9999999877765 78999999999999998 99999875433322 233322 23445668899999999999999999


Q ss_pred             cCChhhhhcC
Q 012021          254 RISMTKIMEN  263 (472)
Q Consensus       254 Rpt~~eil~h  263 (472)
                      ||++.++++|
T Consensus       320 RPs~~ell~~  329 (337)
T cd05054         320 RPTFSELVEI  329 (337)
T ss_pred             CcCHHHHHHH
Confidence            9999999986


No 242
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=100.00  E-value=6e-42  Score=345.08  Aligned_cols=260  Identities=26%  Similarity=0.423  Sum_probs=212.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE----eCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA----SKT   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~----~~~   83 (472)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+|+.++||||+++++++.    ...
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence            34789999999999999999999999999999999875432 2234567788999999999999999999875    345


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .+|+||||+. ++|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  160 (334)
T cd07855          82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS  160 (334)
T ss_pred             eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence            7899999995 578888764 57999999999999999999999999999999999999999999999999998754332


Q ss_pred             cC--CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--------------
Q 012021          163 HQ--DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--------------  226 (472)
Q Consensus       163 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--------------  226 (472)
                      ..  ........|+..|+|||.+......+.++|||||||++|+|++|+.||.+.+.......+..              
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~  240 (334)
T cd07855         161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG  240 (334)
T ss_pred             CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence            21  11223457899999999986644456899999999999999999999987654332222111              


Q ss_pred             ----------cC--CCC-----CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          227 ----------AE--FKF-----PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       227 ----------~~--~~~-----~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                ..  ...     .+..++++.++|.+||+.+|.+|||+++++.||||.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence                      00  001     13368899999999999999999999999999999853


No 243
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00  E-value=1.6e-41  Score=343.74  Aligned_cols=256  Identities=27%  Similarity=0.440  Sum_probs=211.4

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|.+.+... .....+.+.+|+.+++.++||||+++++++...     
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence            45899999999999999999999999999999999875432 122346678899999999999999999988543     


Q ss_pred             -CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           83 -TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                       ...|++++++ |++|.+++..+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        94 ~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877          94 FNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             cccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence             3478888887 78898888878899999999999999999999999999999999999999999999999999875432


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-------------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-------------  228 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-------------  228 (472)
                      .     .....|++.|+|||++.+....+.++|||||||++|+|++|+.||...+.......+....             
T Consensus       173 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T cd07877         173 E-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS  247 (345)
T ss_pred             c-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence            1     2345789999999998664444578999999999999999999998765544333321110             


Q ss_pred             ----------CCC--------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          229 ----------FKF--------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       229 ----------~~~--------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                ...        ....++++.++|.+||++||.+|||+.++++||||++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~  307 (345)
T cd07877         248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  307 (345)
T ss_pred             HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence                      001        112578899999999999999999999999999998743


No 244
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00  E-value=4.2e-41  Score=326.92  Aligned_cols=255  Identities=28%  Similarity=0.523  Sum_probs=216.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccc--ccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEK--VLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKI   85 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~--~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~   85 (472)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+....  .........+++|+.+++.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47999999999999999999999999999999985432  11224456889999999999999999999998664  578


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ++++||+++++|.+++.. +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            999999999999998865 6799999999999999999999999999999999999999999999999999876533211


Q ss_pred             C-CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHH
Q 012021          165 D-GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRR  241 (472)
Q Consensus       165 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~  241 (472)
                      . .......|+..|+|||.+.+..++ .++|+|||||++|+|++|..||..........++...  ...+|..+++++.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  240 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYG-RKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRD  240 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHH
Confidence            1 112345689999999999776654 7899999999999999999999887666555554432  34567889999999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCccc
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +|.+||. +|.+|||+.+++.|||.
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999 57999999999999984


No 245
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00  E-value=1.6e-41  Score=332.47  Aligned_cols=253  Identities=22%  Similarity=0.323  Sum_probs=211.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      -.++|++.+.||+|+||.||+|.+..     ++..||+|.+.....  ......+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFER   81 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            44689999999999999999999987     778999998864432  22345678899999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhccC--------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC---CEEEe
Q 012021           83 TKIYFVMEYVKGGELFGKVAKG--------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG---NLKVS  151 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~~--------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g---~vkl~  151 (472)
                      ...|+||||+.|++|.+++...        .+++..+..++.||+.||.|||++|++||||||+||+++.++   .+||+
T Consensus        82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence            9999999999999999988542        489999999999999999999999999999999999998765   59999


Q ss_pred             eccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CC
Q 012021          152 DFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EF  229 (472)
Q Consensus       152 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~  229 (472)
                      |||++................++..|+|||++.+..+. .++|||||||++|+|++ |..||...+.......+... ..
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~  240 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFT-SKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL  240 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            99998865322111111122345679999999776654 89999999999999997 99999987776666555433 44


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..|..++..+.+++.+||..+|++|||+.++++|
T Consensus       241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            5667789999999999999999999999999987


No 246
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=1.8e-41  Score=337.31  Aligned_cols=255  Identities=22%  Similarity=0.421  Sum_probs=212.8

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC-------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK-------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYE   77 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   77 (472)
                      ++..++|.+++.||+|+||.||+|++..       ++..+|+|.+.....  ......+.+|+.+++.+ +||||+++++
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLG   91 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            4566899999999999999999998753       235799999976431  23346788899999999 7999999999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENL  140 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NI  140 (472)
                      ++...+..|+||||+.+++|.+++..                 ..+++.+++.++.|++.||+|||++|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            99999999999999999999998864                 2478899999999999999999999999999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME  219 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~  219 (472)
                      |++.++.+||+|||++................+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+..+
T Consensus       172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~~g~~p~~~~~~~~  250 (307)
T cd05098         172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  250 (307)
T ss_pred             EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC-CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence            999999999999999875532211111122234578999999877665 489999999999999998 899998887777


Q ss_pred             HHHHHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          220 MYRKIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       220 ~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ....+.... ...|..++.++.++|.+||..+|.+|||+.+++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         251 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            766665553 35667789999999999999999999999999875


No 247
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=6.5e-42  Score=335.82  Aligned_cols=253  Identities=22%  Similarity=0.340  Sum_probs=213.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKT-----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      -..+|++.+.||+|+||+||+|.+..+     +..||+|.+....  .....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~   80 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE   80 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence            355789999999999999999987643     5789999987543  223456788999999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH  145 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~  145 (472)
                      ...++++||+.+++|.+++..                 ..+++..+.+++.|++.||.|||++||+||||||+|||++++
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence            999999999999999888741                 347888999999999999999999999999999999999999


Q ss_pred             CCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHH
Q 012021          146 GNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKI  224 (472)
Q Consensus       146 g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i  224 (472)
                      +.+||+|||++................+++.|+|||.+....+ +.++|||||||++|+|++ |..||.+....+.+..+
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CceEecccccccccccchheeeccCccCCccccCHHHHhcCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            9999999999876533222222234456789999999876665 478999999999999998 89999888887777777


Q ss_pred             hccCC-CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          225 GKAEF-KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       225 ~~~~~-~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..... ..+..++.++.+++.+||+.+|.+||++++|+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         240 RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            66553 4567799999999999999999999999999864


No 248
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00  E-value=2.8e-41  Score=328.66  Aligned_cols=248  Identities=29%  Similarity=0.495  Sum_probs=207.4

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      ....||+|+||.||+|.+..++..||+|.+.....   ...+.+.+|+.+++.++|+||+++++++..++..|+|+||++
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   88 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS---RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVP   88 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH---HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCC
Confidence            44689999999999999999999999999865432   334678899999999999999999999999999999999999


Q ss_pred             CCcccchhcc--CCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccchhhhhcccCCCcc
Q 012021           94 GGELFGKVAK--GKL--KEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        94 gg~L~~~i~~--~~l--~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      +++|.+.+..  +.+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++........  ..
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~~  166 (268)
T cd06624          89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--CT  166 (268)
T ss_pred             CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC--cc
Confidence            9999998865  455  88899999999999999999999999999999999986 67999999999875533221  12


Q ss_pred             ccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCCcHH--HHHH-HHhccCCCCCCCCCHHHHHHHh
Q 012021          169 HTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDSNLM--EMYR-KIGKAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~--~~~~-~i~~~~~~~~~~~s~~l~~li~  244 (472)
                      ....|++.|+|||.+.... ..+.++|+||||+++|+|++|..||......  .... ........+|..+++++.+++.
T Consensus       167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  246 (268)
T cd06624         167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFIL  246 (268)
T ss_pred             ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHH
Confidence            3346899999999986543 2357899999999999999999999764322  1211 1223344567778999999999


Q ss_pred             cccCCCCCCcCChhhhhcCccc
Q 012021          245 KILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +||+.+|.+|||+.+++.||||
T Consensus       247 ~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         247 RCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHcCCCchhCCCHHHHHhCCCC
Confidence            9999999999999999999997


No 249
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00  E-value=1.3e-41  Score=331.88  Aligned_cols=244  Identities=28%  Similarity=0.489  Sum_probs=203.6

Q ss_pred             cCCeEEEeeE--cccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEE
Q 012021            9 MQRYELGRLL--GQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKI   85 (472)
Q Consensus         9 ~~~y~i~~~L--G~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   85 (472)
                      .++|++.+.+  |+|+||.||++.+..++..+|+|++.......        .|+.+...+ +||||+++++.+...+..
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            4577887776  99999999999999999999999987653221        123233322 699999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-CEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-NLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-~vkl~DFGla~~~~~~~  163 (472)
                      |+||||+++++|.+++.. +.+++.+++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++...... 
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-  163 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-  163 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence            999999999999999876 4899999999999999999999999999999999999999998 9999999988754321 


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHH----HHHHhccCCCCCCCCCHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEM----YRKIGKAEFKFPNWFAPEV  239 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~s~~l  239 (472)
                           ....|++.|+|||++.+..+. .++||||||+++|+|++|..||........    ...........++.+++.+
T Consensus       164 -----~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (267)
T PHA03390        164 -----SCYDGTLDYFSPEKIKGHNYD-VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNA  237 (267)
T ss_pred             -----ccCCCCCcccChhhhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHH
Confidence                 234689999999999877765 789999999999999999999975433221    1111233345556789999


Q ss_pred             HHHHhcccCCCCCCcCC-hhhhhcCcccc
Q 012021          240 RRLLSKILDPNPNTRIS-MTKIMENSWFR  267 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt-~~eil~h~~f~  267 (472)
                      .++|.+||+++|.+||+ ++++++||||+
T Consensus       238 ~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        238 NDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            99999999999999996 69999999996


No 250
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00  E-value=2.4e-41  Score=325.77  Aligned_cols=245  Identities=27%  Similarity=0.441  Sum_probs=213.6

Q ss_pred             eeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEec
Q 012021           16 RLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~   92 (472)
                      +.||+|+||.||+|.+...   +..||+|++.......  ..+.+.+|+.+++.++|+||+++++++.+...+|+||||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            4799999999999999866   8999999997654322  4578899999999999999999999999999999999999


Q ss_pred             CCCcccchhcc----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           93 KGGELFGKVAK----------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        93 ~gg~L~~~i~~----------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ++++|.+++..          ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||.+......
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  158 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD  158 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence            99999999865          56899999999999999999999999999999999999999999999999998876543


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ..........+++.|+|||.+....+ +.++||||||+++|+|++ |..||...........+... ....|..+++++.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (262)
T cd00192         159 DYYRKKTGGKLPIRWMAPESLKDGIF-TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELY  237 (262)
T ss_pred             cccccccCCCcCccccCHHHhccCCc-chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHH
Confidence            21122344567889999999877655 489999999999999999 69999998887777777654 3456778899999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +++.+||..+|.+|||+.+++++
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHh
Confidence            99999999999999999999875


No 251
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=100.00  E-value=4.6e-41  Score=331.04  Aligned_cols=254  Identities=28%  Similarity=0.476  Sum_probs=210.9

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CCEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KTKIYF   87 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~l   87 (472)
                      ++|+..+.||.|++|.||++.+..+++.||+|.+.....  ......+.+|+++++.++||||+++++++..  .+.+|+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence            579999999999999999999999999999999875432  2345678999999999999999999998854  447999


Q ss_pred             EEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           88 VMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        88 V~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ||||++|++|.+++.     ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  158 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS  158 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence            999999999987653     246899999999999999999999999999999999999999999999999998754332


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC-----cHHHHHHHHhccC-CCCC----
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS-----NLMEMYRKIGKAE-FKFP----  232 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~-----~~~~~~~~i~~~~-~~~~----  232 (472)
                      .    .....++..|+|||.+.+..++ .++||||||+++|+|++|..||...     ...+....+.... ..++    
T Consensus       159 ~----~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd06621         159 L----AGTFTGTSFYMAPERIQGKPYS-ITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG  233 (287)
T ss_pred             c----cccccCCccccCHHHhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence            2    1234678899999998776665 7899999999999999999999865     2233333333311 1111    


Q ss_pred             --CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          233 --NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       233 --~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                        ..+++++.++|.+||..+|.+|||+.|++.||||++..
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence              12467899999999999999999999999999997644


No 252
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=100.00  E-value=2.2e-41  Score=333.72  Aligned_cols=254  Identities=23%  Similarity=0.440  Sum_probs=213.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKT-----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~   80 (472)
                      +-.++|++.+.||+|+||.||++.+...     ...+|+|.+.....  ......+.+|+.+++.+ +||||+++++++.
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            4457899999999999999999998644     37899999875432  23346688999999999 7999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEc
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLD  143 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld  143 (472)
                      .+..+|++|||+.+|+|.+++..                 +.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            99999999999999999988742                 4589999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHH
Q 012021          144 EHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYR  222 (472)
Q Consensus       144 ~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~  222 (472)
                      .++.+||+|||++................++..|+|||++.+..++ .++|||||||++|+|++ |..||......+.+.
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  245 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  245 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcC-cccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence            9999999999998865432211111223356789999998766654 78999999999999997 999999888777777


Q ss_pred             HHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          223 KIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       223 ~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+.... ...+...+.++.+|+.+||..||++|||+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         246 LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            665543 34566788999999999999999999999999875


No 253
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00  E-value=2.3e-41  Score=327.07  Aligned_cols=246  Identities=26%  Similarity=0.461  Sum_probs=209.4

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.|++.+.||+|+||.||++... ++..+|+|.+......    .+.+.+|+.+++.++||||+++++++......|+||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence            56999999999999999999875 4568999998654322    356888999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+++|+|.+++..  +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......... .
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~  157 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-S  157 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-c
Confidence            99999999998864  56899999999999999999999999999999999999999999999999988754321111 0


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~  245 (472)
                      .....++..|+|||.+.+..+. .++|+||||+++|+|++ |+.||...+..+....+..+. ...|...+.++.+++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~  236 (256)
T cd05114         158 SSGAKFPVKWSPPEVFNFSKYS-SKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYS  236 (256)
T ss_pred             cCCCCCchhhCChhhcccCccc-hhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence            1122345689999998776654 79999999999999999 999999888877777776653 34466678899999999


Q ss_pred             ccCCCCCCcCChhhhhc
Q 012021          246 ILDPNPNTRISMTKIME  262 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~  262 (472)
                      ||..+|.+|||++++++
T Consensus       237 c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         237 CWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HccCCcccCcCHHHHHH
Confidence            99999999999999975


No 254
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00  E-value=8.1e-42  Score=344.42  Aligned_cols=262  Identities=29%  Similarity=0.428  Sum_probs=215.3

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC--
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASK--   82 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~--   82 (472)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.+|+|.+.+..... .....+.+|+.+++.+ +||||+++++++...  
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~   81 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND   81 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence            356789999999999999999999999899999999986543221 2335677899999999 999999999998643  


Q ss_pred             CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           83 TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      ...|+||||+. ++|..++..+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~  160 (337)
T cd07852          82 KDIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL  160 (337)
T ss_pred             ceEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence            47899999997 48988887778899999999999999999999999999999999999999999999999998865433


Q ss_pred             cCC---CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-----------
Q 012021          163 HQD---GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-----------  228 (472)
Q Consensus       163 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-----------  228 (472)
                      ...   .......||+.|+|||++.+....+.++||||||+++|+|++|+.||......+...++....           
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd07852         161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI  240 (337)
T ss_pred             cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHH
Confidence            221   223345689999999988665555689999999999999999999998765544333321110           


Q ss_pred             --------------------CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          229 --------------------FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       229 --------------------~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                          ....+.++.++.++|.+||+.||++|||+.++++||||++-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                                01112368899999999999999999999999999999873


No 255
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.8e-43  Score=353.37  Aligned_cols=252  Identities=27%  Similarity=0.438  Sum_probs=219.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|.=++.||+|+||.||.|++..+.+.||||.+..+.....+--..|.+|+..|+.++|||++.+.++|-.+...|+|||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46667899999999999999999999999999987655444445678899999999999999999999999999999999


Q ss_pred             ecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      ||-| +-.|++.  +.++.|.++..|..+.+.||.|||+++.||||||..||||.+.|.|||+|||.|.....      .
T Consensus       107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P------A  179 (948)
T KOG0577|consen  107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP------A  179 (948)
T ss_pred             HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc------h
Confidence            9965 5566653  57899999999999999999999999999999999999999999999999999886543      3


Q ss_pred             ccccCCCcccChhhhcc---cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCC-CCCHHHHHHH
Q 012021          169 HTTCGTPAYVAPEVINR---RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPN-WFAPEVRRLL  243 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~-~~s~~l~~li  243 (472)
                      .+++|||+|||||++..   ..|+ -++||||||++..+|.-.++|+...+.+.....|..+. +.++. .+|..+++|+
T Consensus       180 nsFvGTPywMAPEVILAMDEGqYd-gkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fv  258 (948)
T KOG0577|consen  180 NSFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFV  258 (948)
T ss_pred             hcccCCccccchhHheeccccccC-CccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHH
Confidence            57899999999999853   3455 68999999999999999999999988886666665554 44433 3789999999


Q ss_pred             hcccCCCCCCcCChhhhhcCcccccCC
Q 012021          244 SKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ..||++-|..|||.++++.|+|.....
T Consensus       259 d~CLqKipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  259 DSCLQKIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             HHHHhhCcccCCcHHHHhhcchhccCC
Confidence            999999999999999999999997643


No 256
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00  E-value=1.9e-41  Score=330.14  Aligned_cols=250  Identities=25%  Similarity=0.367  Sum_probs=206.6

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCc--EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe------CC
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGM--SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS------KT   83 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~------~~   83 (472)
                      |.+++.||+|+||.||+|.+..++.  .||+|.+..... .....+.+.+|+.+++.++||||+++++++..      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence            4578999999999999999877775  699999865432 22445778899999999999999999998642      23


Q ss_pred             EEEEEEEecCCCcccchhcc-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           84 KIYFVMEYVKGGELFGKVAK-------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                      ..+++|||+.+|+|.+++..       ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence            57899999999999877631       34899999999999999999999999999999999999999999999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCC
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNW  234 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~  234 (472)
                      ................+++.|+|||.+.+..+. .++||||||+++|+|++ |..||........+..+..+. ...+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  238 (272)
T cd05075         160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYT-TKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPD  238 (272)
T ss_pred             cccCcccceecCCcccCCcccCCHHHccCCCcC-hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            865432211111233467789999998776654 79999999999999999 899998877777777776654 345666


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ++..+.++|.+||++||.+|||+.+|+++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         239 CLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            88999999999999999999999999865


No 257
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00  E-value=1.3e-41  Score=330.26  Aligned_cols=250  Identities=30%  Similarity=0.595  Sum_probs=212.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||.|+||.||+|.+..+++.+|||.+.............+.+|+.+++.++||||+++++++..++..|++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            57999999999999999999999999999999987654444445567889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           90 EYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||++|++|.+++..     ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence            99999999988752     4689999999999999999999999999999999999999999999999999876543221


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH--HHHHHHHhccCCC-C-CCCCCHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL--MEMYRKIGKAEFK-F-PNWFAPEVR  240 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~--~~~~~~i~~~~~~-~-~~~~s~~l~  240 (472)
                        .....+|++.|+|||.+.+..+. .++|+||||+++|+|++|..||.....  ......+...... . +..+++++.
T Consensus       162 --~~~~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08229         162 --AAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR  238 (267)
T ss_pred             --ccccccCCcCccCHHHhcCCCcc-chhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence              22345789999999999776654 789999999999999999999975433  3444444333222 2 235788999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++|.+||..||++|||+.+|++
T Consensus       239 ~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         239 QLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHHhcCCCcccCCCHHHHHH
Confidence            9999999999999999998875


No 258
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.3e-42  Score=349.02  Aligned_cols=256  Identities=25%  Similarity=0.433  Sum_probs=209.1

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~l   87 (472)
                      ...|++++.||.||.++||++... +.+.+|+|.+.... .+...+.-+.+||..|..|+ |.+||+||+|-..++.+|+
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            457999999999999999999974 44556666554333 23467888999999999996 9999999999999999999


Q ss_pred             EEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||- ..+|..++.++  -++...++.|..|++.|+.++|.+||||.||||.|+|+ -.|.+||+|||+|..+......
T Consensus       438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCccccc
Confidence            99986 45899988764  34445899999999999999999999999999999988 4679999999999987766555


Q ss_pred             CccccccCCCcccChhhhcccCC----------CCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHhcc--CCCCC
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGY----------DGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIGKA--EFKFP  232 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~----------~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~~~--~~~~~  232 (472)
                      -.-.+.+||+.||+||.+....+          .+.++||||||||||+|+.|+.||.... ...-+..|...  .+++|
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp  595 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFP  595 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccccc
Confidence            55567899999999999854433          2578999999999999999999997643 33333344433  23566


Q ss_pred             CCCCHH-HHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 NWFAPE-VRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 ~~~s~~-l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ..-+.. +.++++.||..||++|||+.++|+|||++-
T Consensus       596 ~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  596 DIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             CCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            544443 999999999999999999999999999974


No 259
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00  E-value=3.8e-41  Score=338.80  Aligned_cols=258  Identities=29%  Similarity=0.463  Sum_probs=213.1

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CCEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-KTKIY   86 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~   86 (472)
                      +.++|++++.||.|+||.||+|.+..+|+.||+|.+.+... .......+.+|+.+++.++||||+++++++.. ....|
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            46799999999999999999999999999999999865432 22345678899999999999999999999865 56889


Q ss_pred             EEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           87 FVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      ++|||+ +++|..++..+.+++..+..++.||+.||.|||++||+||||+|.||+++.++.++|+|||++.....     
T Consensus        87 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-----  160 (328)
T cd07856          87 FVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-----  160 (328)
T ss_pred             EEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC-----
Confidence            999998 56888888878899999999999999999999999999999999999999999999999999875422     


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--------------------
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--------------------  226 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--------------------  226 (472)
                      ......+++.|+|||.+.+....+.++||||||+++|+|++|+.||...+....+..+..                    
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (328)
T cd07856         161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR  240 (328)
T ss_pred             CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHH
Confidence            123456788999999876644445899999999999999999999987654322211110                    


Q ss_pred             ------cCCCC-----CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCCC
Q 012021          227 ------AEFKF-----PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLVK  272 (472)
Q Consensus       227 ------~~~~~-----~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~~  272 (472)
                            .....     .+.+++++.++|.+||+.+|++|||+++++.||||+....+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence                  00011     12467899999999999999999999999999999875543


No 260
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=100.00  E-value=1.8e-41  Score=325.60  Aligned_cols=246  Identities=40%  Similarity=0.757  Sum_probs=221.5

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||.|+||.||.+.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+..+..+|+||||+.+++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            69999999999999889999999999887655545667899999999999999999999999999999999999999999


Q ss_pred             cchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCc
Q 012021           98 FGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPA  176 (472)
Q Consensus        98 ~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~  176 (472)
                      .+++.. +.+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......  .......|+..
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~  158 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPE  158 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCcc
Confidence            999876 479999999999999999999999999999999999999999999999999987654322  12345578999


Q ss_pred             ccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCC
Q 012021          177 YVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRIS  256 (472)
Q Consensus       177 y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt  256 (472)
                      |+|||...+... +.++|+||||+++|++++|..||...+....+..+......+|..++.++.++|.+||..||+.|||
T Consensus       159 ~~~Pe~~~~~~~-~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~  237 (250)
T cd05123         159 YLAPEVLLGKGY-GKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLG  237 (250)
T ss_pred             ccChHHhCCCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCC
Confidence            999999876654 4789999999999999999999988887777888877788888889999999999999999999999


Q ss_pred             h---hhhhcCccc
Q 012021          257 M---TKIMENSWF  266 (472)
Q Consensus       257 ~---~eil~h~~f  266 (472)
                      +   .++++||||
T Consensus       238 ~~~~~~l~~~~~f  250 (250)
T cd05123         238 SGGAEEIKAHPFF  250 (250)
T ss_pred             cccHHHHHhCCCC
Confidence            9   899999998


No 261
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00  E-value=5.8e-41  Score=325.28  Aligned_cols=250  Identities=30%  Similarity=0.582  Sum_probs=212.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+...........+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            68999999999999999999999999999999987654444444678899999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           90 EYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        90 E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||+++++|.+++..     ..+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....... 
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-  160 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-  160 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence            99999999888742     458999999999999999999999999999999999999999999999999987554322 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc--HHHHHHHHhccCC-CCCC-CCCHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN--LMEMYRKIGKAEF-KFPN-WFAPEVR  240 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~--~~~~~~~i~~~~~-~~~~-~~s~~l~  240 (472)
                       .......|++.|+|||.+.+..+. .++|+||||+++|+|++|..||....  .......+..+.. ..|. .++.++.
T Consensus       161 -~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08224         161 -TAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELR  238 (267)
T ss_pred             -cccceecCCccccCHHHhccCCCC-chhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHH
Confidence             112345789999999999877665 78999999999999999999996543  3344444443332 3343 5788999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++|.+||.++|++|||+.+|++
T Consensus       239 ~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         239 DLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999875


No 262
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00  E-value=2e-41  Score=370.95  Aligned_cols=253  Identities=27%  Similarity=0.457  Sum_probs=206.9

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +++|++++.||+|+||.||+|.+..+|+.||+|++...........+++.+|+.+++.++||||+++++++.+++..|+|
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            47999999999999999999999999999999999765433334557789999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           89 MEYVKGGELFGKVAK------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                      |||++|++|.+++..            ..++...+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence            999999999887752            23456778899999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCC----------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHH
Q 012021          157 ALAESKHQD----------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEM  220 (472)
Q Consensus       157 ~~~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~  220 (472)
                      .........                ......+||+.|+|||++.+..++ .++|||||||++|+|+||..||........
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S-~kSDIWSLGVILyELLTG~~PF~~~~~~ki  239 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPAS-ESTDIYALGVILYQMLTLSFPYRRKKGRKI  239 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCC-cHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence            765211100                011234799999999999877664 899999999999999999999987554433


Q ss_pred             HHH-HhccCCCC--CCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          221 YRK-IGKAEFKF--PNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       221 ~~~-i~~~~~~~--~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ... ........  ...+++.+.+++.+||..||++|++..+.+.
T Consensus       240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            222 11111111  1347889999999999999999987665543


No 263
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.4e-42  Score=355.90  Aligned_cols=244  Identities=36%  Similarity=0.601  Sum_probs=216.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~   86 (472)
                      ..+.|++...+|.|+|+.|..+.+..+++..++|++.+...       ...+|+.++... +||||+++++++.++.+.|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceee
Confidence            45689999999999999999999999999999999987732       234677666554 7999999999999999999


Q ss_pred             EEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE-cCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL-DEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl-d~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +|||.+.|+.|.+.+...+....++..|+.+|+.|+.|||++|++||||||+|||+ ++.|+++|+|||.++.....   
T Consensus       393 ~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---  469 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---  469 (612)
T ss_pred             eeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence            99999999999999987666558888999999999999999999999999999999 69999999999998865433   


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH-HHHHHHhccCCCCCCCCCHHHHHHHh
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM-EMYRKIGKAEFKFPNWFAPEVRRLLS  244 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~s~~l~~li~  244 (472)
                        ..+.|-|..|+|||++...+|+ .++|+||||++||+||+|+.||...... ++..++..+.+.  .++|.++++||+
T Consensus       470 --~~tp~~t~~y~APEvl~~~~yt-~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKdLl~  544 (612)
T KOG0603|consen  470 --CDTPALTLQYVAPEVLAIQEYT-EACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKDLLQ  544 (612)
T ss_pred             --hcccchhhcccChhhhccCCCC-cchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHHHHH
Confidence              4567889999999999988886 8999999999999999999999875544 777777666555  889999999999


Q ss_pred             cccCCCCCCcCChhhhhcCccc
Q 012021          245 KILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      .||+.||.+|+++.+++.||||
T Consensus       545 ~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  545 QLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HhccCChhhCcChhhhccCcch
Confidence            9999999999999999999999


No 264
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00  E-value=2.7e-41  Score=333.31  Aligned_cols=252  Identities=21%  Similarity=0.315  Sum_probs=209.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCC----------------cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTG----------------MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN   71 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g----------------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn   71 (472)
                      -.++|++++.||+|+||.||+|.+..++                ..||+|.+......  ...+.+.+|+.+++.++|||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~   80 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPN   80 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCC
Confidence            4578999999999999999999876544                56899998765422  44578899999999999999


Q ss_pred             eeeEEEEEEeCCEEEEEEEecCCCcccchhccC------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 012021           72 VVELYEVMASKTKIYFVMEYVKGGELFGKVAKG------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPEN  139 (472)
Q Consensus        72 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~N  139 (472)
                      |+++++++..+...+++|||+.+++|.+++...            .+++..++.++.|++.||.|||++|++||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            999999999999999999999999999888542            58999999999999999999999999999999999


Q ss_pred             EEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc--CCCCCCCCcH
Q 012021          140 LLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA--GYLPFHDSNL  217 (472)
Q Consensus       140 ILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt--G~~Pf~~~~~  217 (472)
                      |+++.++.++|+|||++................+++.|+|||.+.+..+ +.++|||||||++|+|++  |..||...+.
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKF-TTKSDVWAFGVTLWEILTLCREQPYEHLTD  239 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCC-CccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence            9999999999999999875543222222234456788999999876555 489999999999999998  7889987666


Q ss_pred             HHHHHHHhcc--------CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          218 MEMYRKIGKA--------EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       218 ~~~~~~i~~~--------~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ......+...        ....+..++.++.++|.+||+.||.+|||+.+|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            5555544322        12334557899999999999999999999999964


No 265
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=6.3e-42  Score=363.27  Aligned_cols=262  Identities=23%  Similarity=0.347  Sum_probs=197.5

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCC-CcEEEEEEe--------------ecccccchhhHHHHHHHHHHHHhcCC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKT-GMSVAIKII--------------DKEKVLKVGMIDQIKREISVMRLVRH   69 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-g~~vAiK~i--------------~~~~~~~~~~~~~~~~Ei~il~~l~h   69 (472)
                      +..+.++|++++.||+|+||+||+|..+.. +..++.|.+              .+...........+.+|+.+|+.++|
T Consensus       143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H  222 (501)
T PHA03210        143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH  222 (501)
T ss_pred             chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence            345678999999999999999999876543 223333311              11111112334568899999999999


Q ss_pred             CCeeeEEEEEEeCCEEEEEEEecCCCcccchhccC------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEc
Q 012021           70 PNVVELYEVMASKTKIYFVMEYVKGGELFGKVAKG------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLD  143 (472)
Q Consensus        70 pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld  143 (472)
                      |||+++++++...+..|+|+|++. ++|..++..+      ......++.++.||+.||.|||++||+||||||+|||++
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~  301 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN  301 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence            999999999999999999999985 4666665432      244677889999999999999999999999999999999


Q ss_pred             CCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCC-CCCC--cHHHH
Q 012021          144 EHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLP-FHDS--NLMEM  220 (472)
Q Consensus       144 ~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~P-f~~~--~~~~~  220 (472)
                      .++.+||+|||++........ ......+||+.|+|||++.+..+. .++|||||||++|+|++|..+ |...  +....
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~  379 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYC-EITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ  379 (501)
T ss_pred             CCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence            999999999999976543221 112346799999999999887775 789999999999999998754 4332  11122


Q ss_pred             HHHHhcc----CCCCC----------------------------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          221 YRKIGKA----EFKFP----------------------------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       221 ~~~i~~~----~~~~~----------------------------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +.++...    ...+|                            ..++.++.++|.+||..||++|||+.|+|+||||..
T Consensus       380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~  459 (501)
T PHA03210        380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA  459 (501)
T ss_pred             HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence            2111110    00011                            124567888899999999999999999999999976


Q ss_pred             C
Q 012021          269 G  269 (472)
Q Consensus       269 ~  269 (472)
                      .
T Consensus       460 ~  460 (501)
T PHA03210        460 E  460 (501)
T ss_pred             C
Confidence            3


No 266
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00  E-value=1.9e-41  Score=349.68  Aligned_cols=254  Identities=25%  Similarity=0.391  Sum_probs=207.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKT-----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMA   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~   80 (472)
                      +-.++|++++.||+|+||.||+|.+...     +..||||++.....  ....+.+.+|+.+|+.++ ||||+++++++.
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR--SSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            3466889999999999999999987533     35799999965432  234567889999999996 999999999999


Q ss_pred             eCCEEEEEEEecCCCcccchhcc---------------------------------------------------------
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAK---------------------------------------------------------  103 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~---------------------------------------------------------  103 (472)
                      ....+|+||||+++|+|.+++..                                                         
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence            99999999999999999877642                                                         


Q ss_pred             ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEc
Q 012021          104 ----------------------------------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLD  143 (472)
Q Consensus       104 ----------------------------------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld  143 (472)
                                                              ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~  271 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence                                                    1377888899999999999999999999999999999999


Q ss_pred             CCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHH-HHH
Q 012021          144 EHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLM-EMY  221 (472)
Q Consensus       144 ~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~-~~~  221 (472)
                      .++.+||+|||++................+++.|+|||.+.+..+. .++|||||||++|+|++ |..||...... ..+
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~  350 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT-TLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY  350 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence            9999999999998765432221122334577889999998776654 89999999999999997 99999875443 333


Q ss_pred             HHHhcc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          222 RKIGKA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       222 ~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..+..+ ....+..+++++.+++.+||..||++|||+.++.+.
T Consensus       351 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  393 (400)
T cd05105         351 NKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI  393 (400)
T ss_pred             HHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence            344333 344566688999999999999999999999998763


No 267
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=4.8e-42  Score=348.26  Aligned_cols=256  Identities=32%  Similarity=0.587  Sum_probs=221.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      -|..++.||-|+||+|.+++...|...+|+|.+.+..+.....+..++.|-+||..-..+-||+||..|.+++.+|+||+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            47889999999999999999999999999999999888777778889999999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC-----
Q 012021           91 YVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ-----  164 (472)
Q Consensus        91 ~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~-----  164 (472)
                      |++||++..++-+ |-|.|..++.|+..|.+|++++|..|+|||||||+|||||.+|+|||.||||++-+.....     
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq  789 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  789 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence            9999999887755 8899999999999999999999999999999999999999999999999999874432110     


Q ss_pred             -------C----------------------------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCC
Q 012021          165 -------D----------------------------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGY  209 (472)
Q Consensus       165 -------~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~  209 (472)
                             +                            ...+..+||+.|+|||++...+|. ..+|.||.|||||+|+.|+
T Consensus       790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~-q~cdwws~gvil~em~~g~  868 (1034)
T KOG0608|consen  790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT-QLCDWWSVGVILYEMLVGQ  868 (1034)
T ss_pred             CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc-ccchhhHhhHHHHHHhhCC
Confidence                   0                            011233699999999999999987 7899999999999999999


Q ss_pred             CCCCCCcHHHHHHHHhcc----CCCCCCCCCHHHHHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          210 LPFHDSNLMEMYRKIGKA----EFKFPNWFAPEVRRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       210 ~Pf~~~~~~~~~~~i~~~----~~~~~~~~s~~l~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      .||.+....+...++.+-    .+.....+|+++.++|.++. -+++.|..   .+++..||||+.
T Consensus       869 ~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  869 PPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             CCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence            999988776665555432    23344568999999998844 46778874   567999999985


No 268
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=100.00  E-value=2.5e-41  Score=335.43  Aligned_cols=260  Identities=30%  Similarity=0.489  Sum_probs=208.6

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--   82 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--   82 (472)
                      |-...++|++.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++...  
T Consensus         3 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (311)
T cd07866           3 GCSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPD   81 (311)
T ss_pred             CCcccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence            3445789999999999999999999999999999999986543221 2234567899999999999999999987433  


Q ss_pred             ------CEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeecc
Q 012021           83 ------TKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        83 ------~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                            ..+|+||||+.+ +|...+..  ..+++..++.++.||+.||.|||++||+||||||+||++++++.++|+|||
T Consensus        82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          82 KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             cccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCc
Confidence                  357999999965 56555543  479999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhcccCC---------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh
Q 012021          155 LSALAESKHQD---------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG  225 (472)
Q Consensus       155 la~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~  225 (472)
                      ++.........         .......|++.|+|||.+.+....+.++|||||||++|+|++|+.||.+.+.......+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~  240 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF  240 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            98765432211         111234578899999998665445588999999999999999999998877665555442


Q ss_pred             ccCC-----------------------CCC-------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          226 KAEF-----------------------KFP-------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       226 ~~~~-----------------------~~~-------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ....                       ..+       ..+++++.++|.+||..||.+|||+.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            2100                       000       1244678899999999999999999999999998


No 269
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=4.6e-41  Score=331.18  Aligned_cols=258  Identities=29%  Similarity=0.574  Sum_probs=217.2

Q ss_pred             CeEEEeeEcccCCeEEEEEEEc---CCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVL-KVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   85 (472)
                      .|++.+.||.|+||.||+|.+.   .+|+.||+|++...... .....+.+.+|+.+++.+ +||||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4899999999999999999985   47899999999764332 223346788999999999 599999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||||+++++|.+++.. +.+++..+..++.||+.||.|||++|++||||+|+|||++.++.++|+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            999999999999998865 6799999999999999999999999999999999999999999999999999876543221


Q ss_pred             CCccccccCCCcccChhhhccc-CCCCCcccchhhhHHHHHHhcCCCCCCCC----cHHHHHHHHhccCCCCCCCCCHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRR-GYDGSKADIWSCGVILYVLLAGYLPFHDS----NLMEMYRKIGKAEFKFPNWFAPEV  239 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~~lltG~~Pf~~~----~~~~~~~~i~~~~~~~~~~~s~~l  239 (472)
                       .......|+..|+|||.+... ...+.++||||||+++|+|++|..||...    ........+......+|..+++.+
T Consensus       161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (290)
T cd05613         161 -ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALA  239 (290)
T ss_pred             -cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHH
Confidence             122346789999999998643 23357899999999999999999999643    233444455555666777789999


Q ss_pred             HHHHhcccCCCCCCcC-----ChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRI-----SMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rp-----t~~eil~h~~f~~~  269 (472)
                      .+++.+||..||++||     ++.+++.||||++.
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  274 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI  274 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence            9999999999999997     88999999999763


No 270
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00  E-value=3.3e-41  Score=326.19  Aligned_cols=247  Identities=28%  Similarity=0.470  Sum_probs=208.8

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|++.+.||+|+||.||++.+. ++..+|+|++.+....    .+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence            46899999999999999999885 5678999998654322    246778999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||++|++|.+++..  +.+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++......... .
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~  157 (256)
T cd05059          79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-S  157 (256)
T ss_pred             ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-c
Confidence            99999999998864  46899999999999999999999999999999999999999999999999998754321110 0


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~  245 (472)
                      .....++..|+|||.+.+..+. .++||||||+++|+|++ |..||...+..+....+... ....|...++++.+++.+
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  236 (256)
T cd05059         158 SQGTKFPVKWAPPEVFDYSRFS-SKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYS  236 (256)
T ss_pred             cCCCCCCccccCHHHhccCCCC-chhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHH
Confidence            1111234579999998776664 78999999999999999 89999887777776666554 345566789999999999


Q ss_pred             ccCCCCCCcCChhhhhcC
Q 012021          246 ILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h  263 (472)
                      ||..+|++|||+.++++.
T Consensus       237 cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         237 CWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HhcCChhhCcCHHHHHHH
Confidence            999999999999999864


No 271
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00  E-value=3.6e-41  Score=329.87  Aligned_cols=252  Identities=35%  Similarity=0.544  Sum_probs=211.0

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TKIYFVM   89 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~lV~   89 (472)
                      |++.+.||+|+||.||+|.+..+|+.+|+|.+.... ........+.+|+.+++.++|||++++++++...  ...|+||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence            789999999999999999999999999999998764 2223446688999999999999999999999888  8999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+.+ +|.+.+..  ..+++..++.++.||+.||.|||++|++|+||+|+||++++++.++|+|||++........ ..
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-~~  157 (287)
T cd07840          80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-AD  157 (287)
T ss_pred             ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-cc
Confidence            99975 78887765  4799999999999999999999999999999999999999999999999999876644321 11


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC------------------
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF------------------  229 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~------------------  229 (472)
                      .....++..|+|||.+.+....+.++||||||+++|+|++|+.||...+.......+.....                  
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN  237 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence            23446788999999876654456899999999999999999999988776555444432100                  


Q ss_pred             -----C--------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          230 -----K--------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       230 -----~--------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                           .        +...+++++.++|.+||..+|.+||++.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                 0        011137889999999999999999999999999997


No 272
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00  E-value=4.2e-41  Score=334.30  Aligned_cols=257  Identities=23%  Similarity=0.364  Sum_probs=211.6

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEE
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYE   77 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   77 (472)
                      +..+..++|++.+.||+|+||.||+|.+.     .++..||+|.+.....  ....+.+.+|+.+++++ +||||+++++
T Consensus        29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~  106 (302)
T cd05055          29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLG  106 (302)
T ss_pred             cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence            34566779999999999999999999753     3556899999865432  23456788999999999 7999999999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeecc
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                      ++...+..|+||||+.+++|.+++...   .+++.++..++.||+.||.|||++||+|+||||+|||++.++.++|+|||
T Consensus       107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg  186 (302)
T cd05055         107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG  186 (302)
T ss_pred             EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc
Confidence            999999999999999999999998642   38999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc--CCCC
Q 012021          155 LSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA--EFKF  231 (472)
Q Consensus       155 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~--~~~~  231 (472)
                      ++................+++.|+|||.+....+. .++||||+||++|+|++ |..||........+.+....  ....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~  265 (302)
T cd05055         187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQ  265 (302)
T ss_pred             ccccccCCCceeecCCCCcccccCCHhhhccCCCC-cHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCC
Confidence            98755432211111223467789999998776654 79999999999999998 99999876655444333322  2334


Q ss_pred             CCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          232 PNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       232 ~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +...++++.+++.+||+++|++|||+.+++..
T Consensus       266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~  297 (302)
T cd05055         266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL  297 (302)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            56688999999999999999999999999863


No 273
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00  E-value=2.5e-41  Score=340.35  Aligned_cols=261  Identities=26%  Similarity=0.370  Sum_probs=213.4

Q ss_pred             ccCCeEE-EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchh-----------hHHHHHHHHHHHHhcCCCCeeeE
Q 012021            8 LMQRYEL-GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVG-----------MIDQIKREISVMRLVRHPNVVEL   75 (472)
Q Consensus         8 l~~~y~i-~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~-----------~~~~~~~Ei~il~~l~hpnIv~l   75 (472)
                      +.+||.. .+.||.|+||+||+|.+..+++.||+|.+.........           ....+.+|+.+++.++||||+++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            5678875 57799999999999999999999999998654322100           11247789999999999999999


Q ss_pred             EEEEEeCCEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeecc
Q 012021           76 YEVMASKTKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        76 ~~~~~~~~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                      ++++..++..|+||||+. ++|.+++.. ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||
T Consensus        86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg  164 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG  164 (335)
T ss_pred             eEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence            999999999999999996 588888765 579999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhccc------------CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHH
Q 012021          155 LSALAESKH------------QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYR  222 (472)
Q Consensus       155 la~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~  222 (472)
                      ++.......            .........+++.|+|||.+.+....+.++|+|||||++|+|++|..||...+..+.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~  244 (335)
T PTZ00024        165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG  244 (335)
T ss_pred             ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            987654111            01112334578899999998765555689999999999999999999998877665554


Q ss_pred             HHhccC-----C-----------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          223 KIGKAE-----F-----------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       223 ~i~~~~-----~-----------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .+....     .                       ......+.++.++|.+||+.+|.+|||+++++.||||+..
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            432210     0                       0012357889999999999999999999999999999864


No 274
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00  E-value=5.4e-41  Score=325.20  Aligned_cols=249  Identities=22%  Similarity=0.406  Sum_probs=210.1

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +-.++|++++.||+|+||.||+|.+. ++..||+|.+.....    ..+.+.+|+.+++.++||||+++++++...+..|
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY   77 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence            45678999999999999999999864 667899999865432    2467889999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++|||+.+++|.+++..   ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  157 (261)
T cd05072          78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE  157 (261)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence            99999999999998854   468999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      .. ......++..|+|||.+....+ +.++|||||||++|+|++ |..||...........+... ....+..++.++.+
T Consensus       158 ~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (261)
T cd05072         158 YT-AREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYD  235 (261)
T ss_pred             ee-ccCCCccceecCCHHHhccCCC-ChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            11 1122345678999999876655 478999999999999998 99999887776666666544 23334557899999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++.+||..+|++|||++++++
T Consensus       236 li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         236 IMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999975


No 275
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00  E-value=6.5e-41  Score=328.23  Aligned_cols=253  Identities=21%  Similarity=0.337  Sum_probs=210.4

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCc----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGM----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      +...+|++.+.||+|+||+||+|.+..+++    .||+|++.....  ......+.+|+.+++.++||||+++++++...
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVMAGVGSPYVCRLLGICLTS   81 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC--HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence            345689999999999999999999887776    489999865432  23456788999999999999999999998754


Q ss_pred             CEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                       ..++++||+++|+|.+.+..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        82 -~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          82 -TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             -CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence             57899999999999999865  469999999999999999999999999999999999999999999999999987654


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHH
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPE  238 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~  238 (472)
                      ............+++.|+|||.+.+..++ .++|||||||++|+|++ |..||...........+... ....+..++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRFT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTID  239 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHH
Confidence            32221111223456789999999777665 79999999999999998 99999877666655555443 34455668999


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcC
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.++|.+||..||+.||++.++++.
T Consensus       240 ~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         240 VYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999853


No 276
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00  E-value=2e-41  Score=327.89  Aligned_cols=247  Identities=25%  Similarity=0.439  Sum_probs=213.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ...|++++.||.|+||.||+|.+.. +..+|+|++.....   .....+.+|+.+++.++||||+++++++......|+|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII   80 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence            4579999999999999999999977 89999999876542   2346788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           89 MEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |||+++++|.+++..   +.+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++........ 
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-  159 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-  159 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence            999999999999864   4689999999999999999999999999999999999999999999999999876533211 


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li  243 (472)
                       ......++..|+|||.+....+. .++||||||+++|+|++ |..||...+..+.+..+... ....+..+++++.++|
T Consensus       160 -~~~~~~~~~~~~~PE~~~~~~~~-~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  237 (261)
T cd05148         160 -LSSDKKIPYKWTAPEAASHGTFS-TKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIM  237 (261)
T ss_pred             -cccCCCCceEecCHHHHccCCCC-chhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHH
Confidence             11233456789999998776654 78999999999999998 89999888777777766644 3455667899999999


Q ss_pred             hcccCCCCCCcCChhhhhc
Q 012021          244 SKILDPNPNTRISMTKIME  262 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+||..||.+|||+.+|++
T Consensus       238 ~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         238 LECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHHcCCCchhCcCHHHHHH
Confidence            9999999999999999975


No 277
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00  E-value=3.7e-41  Score=333.25  Aligned_cols=254  Identities=27%  Similarity=0.490  Sum_probs=215.9

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |+-...||+|+||.||++.+..+|+.||+|.+....   ......+.+|+.+++.++||||+++++++...+..|+||||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   98 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF   98 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence            333468999999999999999999999999985432   23456788999999999999999999999999999999999


Q ss_pred             cCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccc
Q 012021           92 VKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTT  171 (472)
Q Consensus        92 ~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~  171 (472)
                      +++++|.+++..+.+++..++.++.|++.||.|||++|++||||+|+||+++.++.++|+|||++........  .....
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~  176 (292)
T cd06657          99 LEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL  176 (292)
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccccc
Confidence            9999999988888899999999999999999999999999999999999999999999999998765433221  12345


Q ss_pred             cCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC---CCCCCCCCHHHHHHHhcccC
Q 012021          172 CGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE---FKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       172 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~s~~l~~li~~~L~  248 (472)
                      .|++.|+|||.+.+..+ +.++|+||+|+++|+|++|..||...........+....   ......+++.+.+++.+||+
T Consensus       177 ~~~~~y~~pE~~~~~~~-~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  255 (292)
T cd06657         177 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLV  255 (292)
T ss_pred             ccCccccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHh
Confidence            68999999999876555 479999999999999999999998876655544443322   22334578999999999999


Q ss_pred             CCCCCcCChhhhhcCcccccCCC
Q 012021          249 PNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       249 ~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      .+|.+||++.+++.||||.+...
T Consensus       256 ~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         256 RDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             CCcccCcCHHHHhcChHHhccCC
Confidence            99999999999999999988654


No 278
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00  E-value=4.9e-41  Score=331.52  Aligned_cols=251  Identities=26%  Similarity=0.403  Sum_probs=211.8

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      .++|.+.+.||+|+||.||+|.+.     .++..+|+|.+.....   ...+.+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVCGDGD   80 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            457999999999999999999864     3456799999864432   23467889999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC
Q 012021           84 KIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG  146 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g  146 (472)
                      ..++||||+++++|.+++..                 +.+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~  160 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL  160 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence            99999999999999998853                 2378999999999999999999999999999999999999999


Q ss_pred             CEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHh
Q 012021          147 NLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIG  225 (472)
Q Consensus       147 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~  225 (472)
                      .++|+|||++................+++.|+|||.+.+..+. .++||||||+++|+|++ |..||...+..+....+.
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  239 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT  239 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            9999999998755432221122344578899999998776654 78999999999999998 999998887777777666


Q ss_pred             ccCC-CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          226 KAEF-KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       226 ~~~~-~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+.. ..+..++..+.+++.+||..||++|||+.++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~  278 (291)
T cd05094         240 QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI  278 (291)
T ss_pred             CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            5544 3455678999999999999999999999999763


No 279
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00  E-value=5.4e-41  Score=326.18  Aligned_cols=248  Identities=26%  Similarity=0.395  Sum_probs=208.1

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||.||+|.+..+ ..||+|.+......    .+.+.+|+.+++.++||||+++++.+. ....|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~   76 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY   76 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence            4567999999999999999999988655 46999998764432    356889999999999999999999875 45689


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      +||||+.+++|.+++..   ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~  156 (262)
T cd05071          77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  156 (262)
T ss_pred             EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence            99999999999999864   358999999999999999999999999999999999999999999999999987554322


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      . .......++..|+|||+..+..++ .++||||||+++|+|++ |..||.+......+..+... ....+..++..+.+
T Consensus       157 ~-~~~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  234 (262)
T cd05071         157 Y-TARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD  234 (262)
T ss_pred             c-ccccCCcccceecCHhHhccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHH
Confidence            1 111233467789999998766664 89999999999999999 89999887776666666543 23445568899999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +|.+||.+||++|||+.++++
T Consensus       235 li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         235 LMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHHccCCcccCCCHHHHHH
Confidence            999999999999999999875


No 280
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00  E-value=5.5e-41  Score=332.29  Aligned_cols=248  Identities=25%  Similarity=0.417  Sum_probs=207.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCc--EEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGM--SVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIY   86 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~   86 (472)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.+....  .....+.+.+|+.++.++ +||||+++++++...+.+|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            689999999999999999999877765  46888875322  223346788999999998 7999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           87 FVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      ++|||+++++|.+++..                 +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence            99999999999988854                 2488899999999999999999999999999999999999999999


Q ss_pred             EeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC
Q 012021          150 VSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE  228 (472)
Q Consensus       150 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~  228 (472)
                      |+|||++........   ......+..|+|||++....+. .++|||||||++|+|++ |..||..........++....
T Consensus       160 l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~-~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~  235 (297)
T cd05089         160 IADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYT-TKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY  235 (297)
T ss_pred             ECCcCCCccccceec---cCCCCcCccccCchhhccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence            999999864321111   1112234579999998776654 79999999999999997 999999888777777766543


Q ss_pred             -CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          229 -FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       229 -~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                       ...|..+++++.+||.+||..+|.+|||++++++.
T Consensus       236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             34566689999999999999999999999999765


No 281
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00  E-value=4.3e-41  Score=330.08  Aligned_cols=252  Identities=26%  Similarity=0.398  Sum_probs=211.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS   81 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   81 (472)
                      +...+|++.+.||+|+||.||++...     .++..+|+|.+....   ......+.+|+.+++.++||||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   78 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTE   78 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence            34568999999999999999999743     356789999876442   2345678999999999999999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhcc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC
Q 012021           82 KTKIYFVMEYVKGGELFGKVAK----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH  145 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~  145 (472)
                      .+..|++|||+.+++|.+++..                ..+++..++.++.||+.|+.|||++|++||||||+|||++++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~  158 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG  158 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence            9999999999999999988754                247899999999999999999999999999999999999999


Q ss_pred             CCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHH
Q 012021          146 GNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKI  224 (472)
Q Consensus       146 g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i  224 (472)
                      +.+||+|||++................+++.|+|||.+.+..++ .++|||||||++|+|++ |.+||...........+
T Consensus       159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  237 (280)
T cd05092         159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT-TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI  237 (280)
T ss_pred             CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcC-chhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence            99999999998754322211112233457889999998877664 78999999999999998 99999887776666666


Q ss_pred             hcc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          225 GKA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       225 ~~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ... ....+..+++.+.++|.+||..||.+||++++|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         238 TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            554 34556678999999999999999999999999975


No 282
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=9.4e-41  Score=333.38  Aligned_cols=255  Identities=23%  Similarity=0.425  Sum_probs=212.0

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC-------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK-------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYE   77 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   77 (472)
                      .+..++|.+++.||+|+||.||+|.+..       ....+|+|.+.....  ......+.+|+.+++.+ +||||+++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLG   85 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence            3456799999999999999999998642       345799999865432  23456788999999999 6999999999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENL  140 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NI  140 (472)
                      ++...+.+|++|||+.+|+|.+++..                 ..+++..+..++.||+.||.|||++|++||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            99999999999999999999988853                 2478899999999999999999999999999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME  219 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~  219 (472)
                      |++.++.+||+|||++................+++.|+|||++.+..+ +.++||||||+++|+|++ |..||...+..+
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  244 (314)
T cd05099         166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY-THQSDVWSFGILMWEIFTLGGSPYPGIPVEE  244 (314)
T ss_pred             EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc-CccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999876543221111222334568999999877655 479999999999999999 899998888777


Q ss_pred             HHHHHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          220 MYRKIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       220 ~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+..+.... ...+..++.++.++|.+||..||++|||+.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         245 LFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            777665543 34566688999999999999999999999999864


No 283
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00  E-value=5.3e-41  Score=325.28  Aligned_cols=249  Identities=24%  Similarity=0.396  Sum_probs=209.5

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+..++|++.+.||+|+||.||+|.+. ++..||+|.+......    .+.+.+|+.+++.++||||+++++++. ....
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~   75 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI   75 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence            356789999999999999999999875 6677999998765432    256889999999999999999999885 4568


Q ss_pred             EEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |++|||+.+++|.+++..   ..+++..++.++.|++.||.|||++|++||||||+||++++++.++|+|||++......
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05070          76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence            999999999999998864   35899999999999999999999999999999999999999999999999998765432


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ... ......++..|+|||.+.+..+ +.++||||||+++|+|++ |..||.+.+..+....+... ....+...+.++.
T Consensus       156 ~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (260)
T cd05070         156 EYT-ARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLH  233 (260)
T ss_pred             ccc-cccCCCCCccccChHHHhcCCC-cchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHH
Confidence            111 1112235567999999876655 479999999999999999 99999888777777766554 4456667889999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +++.+||.++|++|||++++.+
T Consensus       234 ~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         234 ELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHH
Confidence            9999999999999999999864


No 284
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00  E-value=5.7e-41  Score=330.71  Aligned_cols=250  Identities=23%  Similarity=0.399  Sum_probs=208.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+.....  ......+.+|+.+++.++||||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence            58999999999999999998754     235799998865432  23346788999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 012021           86 YFVMEYVKGGELFGKVAK-------------------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENL  140 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-------------------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NI  140 (472)
                      |++|||+.+++|.+++..                         ..+++..++.++.|++.||.|||++|++||||||+||
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni  158 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV  158 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence            999999999999887643                         2478899999999999999999999999999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME  219 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~  219 (472)
                      |+++++.+||+|||++................++..|+|||.+.+..+. .++||||||+++|+|++ |..||.+.....
T Consensus       159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcc-hHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999998754332211112234567789999998766554 88999999999999998 999998887777


Q ss_pred             HHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          220 MYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       220 ~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ....+... ....|..++.++.+++.+||+++|++||+++++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~  282 (290)
T cd05045         238 LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE  282 (290)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            66655543 344566789999999999999999999999999863


No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=100.00  E-value=1.6e-40  Score=317.74  Aligned_cols=248  Identities=34%  Similarity=0.575  Sum_probs=214.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .|++.+.||.|++|.||++.+..+++.+++|++.....   .....+.+|+.+++.++||||+++++++......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence            48899999999999999999998999999999976543   345788999999999999999999999999999999999


Q ss_pred             ecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           91 YVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        91 ~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      |++|++|.+++...  .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+........   .
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~  154 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R  154 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence            99999999988664  799999999999999999999999999999999999999999999999999876654321   2


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-CCCCCCC--CCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-EFKFPNW--FAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~--~s~~l~~li~~  245 (472)
                      ....|+..|+|||.+....+ +.++|+||||+++|+|++|..||...+.......+... ....+..  ++.++.++|.+
T Consensus       155 ~~~~~~~~~~~PE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (253)
T cd05122         155 NTMVGTPYWMAPEVINGKPY-DYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKK  233 (253)
T ss_pred             cceecCCcccCHHHHcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHH
Confidence            45578999999999876654 58899999999999999999999887544433333322 2223322  48899999999


Q ss_pred             ccCCCCCCcCChhhhhcCcc
Q 012021          246 ILDPNPNTRISMTKIMENSW  265 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h~~  265 (472)
                      ||+.||++|||+.+++.|||
T Consensus       234 ~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         234 CLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HccCChhhCCCHHHHhcCCC
Confidence            99999999999999999998


No 286
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00  E-value=6.6e-41  Score=322.55  Aligned_cols=250  Identities=27%  Similarity=0.502  Sum_probs=219.7

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+....... .....+.+|+.+++.++||||+++++++.+....|+|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence            6999999999999999999999999999999987654332 334567789999999999999999999999999999999


Q ss_pred             ecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           91 YVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        91 ~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |+++++|.+++..     ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......   
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---  156 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---  156 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence            9999999988755     46899999999999999999999999999999999999999999999999998876543   


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHh
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLS  244 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~  244 (472)
                       ......|++.|+|||.+.+..+. .++|+||||+++++|++|+.||...+.......+....+ ..+..++.++.+++.
T Consensus       157 -~~~~~~~~~~~~~Pe~~~~~~~~-~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  234 (256)
T cd08530         157 -MAKTQIGTPHYMAPEVWKGRPYS-YKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIR  234 (256)
T ss_pred             -CcccccCCccccCHHHHCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHH
Confidence             22345689999999999776654 789999999999999999999998887776666665543 355568899999999


Q ss_pred             cccCCCCCCcCChhhhhcCccc
Q 012021          245 KILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +||..+|++|||+.++++||++
T Consensus       235 ~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         235 SMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHcCCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999974


No 287
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00  E-value=8.8e-41  Score=323.91  Aligned_cols=249  Identities=24%  Similarity=0.381  Sum_probs=210.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||.||+|.+. +++.||+|.+.....    ..+.+.+|+.+++.++||||+++++++...+..|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY   77 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence            44578999999999999999999974 457899999875432    2356889999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++|||+.+++|.+++..   ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  157 (261)
T cd05068          78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI  157 (261)
T ss_pred             eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence            99999999999999865   259999999999999999999999999999999999999999999999999988664221


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      ... .....++..|+|||.+.+..+ +.++||||||+++|+|++ |+.||.+.+.......+... ....+...+..+.+
T Consensus       158 ~~~-~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (261)
T cd05068         158 YEA-REGAKFPIKWTAPEAALYNRF-SIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYD  235 (261)
T ss_pred             ccc-cCCCcCceeccCccccccCCC-CchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH
Confidence            111 111223457999999876655 478999999999999999 99999888777766666544 23455668899999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++.+||..+|.+||++.+++.
T Consensus       236 li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         236 IMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHhhcCcccCCCHHHHHH
Confidence            999999999999999999875


No 288
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00  E-value=9.3e-41  Score=327.82  Aligned_cols=251  Identities=27%  Similarity=0.385  Sum_probs=202.2

Q ss_pred             cCCe-EEEeeEcccCCeEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--
Q 012021            9 MQRY-ELGRLLGQGTFAKVHYAR----NLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--   81 (472)
Q Consensus         9 ~~~y-~i~~~LG~G~fg~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--   81 (472)
                      .+|| ++.+.||+|+||+||++.    ...++..||+|++.....  ......+.+|+.+++.++||||+++++++..  
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG   79 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            5677 999999999999998765    335788999999875432  1234667899999999999999999998765  


Q ss_pred             CCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           82 KTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ...+|++|||+.+++|.+++....+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        80 ~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          80 GKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             CceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            34689999999999999999888899999999999999999999999999999999999999999999999999876543


Q ss_pred             ccCCC-ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH--HHH-------------HHHh
Q 012021          162 KHQDG-LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM--EMY-------------RKIG  225 (472)
Q Consensus       162 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~--~~~-------------~~i~  225 (472)
                      ..... ......++..|+|||.+....+ +.++||||||+++|+|++|..||......  +..             ..+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKENKF-SYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE  238 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcccCC-CcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence            22111 1122345677999999876655 48999999999999999999998653211  100             0011


Q ss_pred             c-cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          226 K-AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       226 ~-~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      . .....+..++.++.+++.+||.++|++|||++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            1 122345667899999999999999999999999985


No 289
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00  E-value=8.2e-42  Score=361.71  Aligned_cols=246  Identities=32%  Similarity=0.548  Sum_probs=207.1

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEE-EE---eC--
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEV-MA---SK--   82 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~-~~---~~--   82 (472)
                      .+++|.+.|.+|||+.||+|.+...|..||+|.+-..   +....+.+++||++|+.|+ |+|||.+++. ..   ..  
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            4788999999999999999999888899999997543   4466789999999999997 9999999993 21   11  


Q ss_pred             -CEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           83 -TKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRG--VCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~g--iiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                       -.++|.||||.||.|-|++..   .+|+|.++++||.|+++||.+||...  |||||||-|||||+.+|+.||||||.|
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence             257899999999999998864   56999999999999999999999997  999999999999999999999999988


Q ss_pred             hhhhccc-C-CC--c---cccccCCCcccChhhh---cccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc
Q 012021          157 ALAESKH-Q-DG--L---LHTTCGTPAYVAPEVI---NRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK  226 (472)
Q Consensus       157 ~~~~~~~-~-~~--~---~~~~~gt~~y~aPE~~---~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~  226 (472)
                      +-..... . ..  .   --...-|+.|+|||.+   .+.+. +.|+|||+|||+||-|+...+||++....    .|..
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI-~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIln  268 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI-GEKSDIWALGCLLYKLCYFTTPFEESGKL----AILN  268 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC-cchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEe
Confidence            6432211 0 00  0   0113469999999986   34444 48999999999999999999999887543    4678


Q ss_pred             cCCCCCC--CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          227 AEFKFPN--WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       227 ~~~~~~~--~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.+.+|+  .++..+.+||+.||++||.+||++.+++.+
T Consensus       269 g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  269 GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            8888886  589999999999999999999999999875


No 290
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=100.00  E-value=7.4e-41  Score=324.14  Aligned_cols=248  Identities=25%  Similarity=0.425  Sum_probs=208.6

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++++.||+|+||+||++.+. .+..+|+|.+......    .+.+.+|+.+++.++||||+++++++......|+|
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence            457999999999999999999874 3456999998654322    35688999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.+++|.+++..  ..+++..++.++.||+.||.|||++|++|+||||.||+++.++.+||+|||++......... 
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-  156 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-  156 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-
Confidence            999999999998864  46899999999999999999999999999999999999999999999999988754322111 


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHh
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLS  244 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~  244 (472)
                      ......++..|+|||.+.+..+. .++||||||+++|+|++ |..||...+.......+.... ...+...++.+.+++.
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~-~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  235 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLYSKFS-SKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMY  235 (256)
T ss_pred             ecCCCccChhhCCHHHHhcCccc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            11122345679999999766654 78999999999999998 999998877776666666543 3345557899999999


Q ss_pred             cccCCCCCCcCChhhhhcC
Q 012021          245 KILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       245 ~~L~~dP~~Rpt~~eil~h  263 (472)
                      +||.+||.+|||+.+|+++
T Consensus       236 ~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         236 SCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHcCCCcccCCCHHHHHHh
Confidence            9999999999999999864


No 291
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=6.6e-41  Score=332.65  Aligned_cols=255  Identities=22%  Similarity=0.436  Sum_probs=213.8

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEc-------CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNL-------KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYE   77 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~-------~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   77 (472)
                      .+..++|++.+.||+|+||.||+|++.       .++..||+|.+....  .......+.+|+.+++.+ +||||+++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            456779999999999999999999753       234579999986542  123456788999999999 7999999999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENL  140 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NI  140 (472)
                      ++......|++|||+.+++|.+++..                 ..++...+..++.||+.||.|||++|++||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            99999999999999999999988754                 2467788999999999999999999999999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME  219 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~  219 (472)
                      |++.++.+||+|||++................+++.|+|||++.+..+. .++||||||+++|+|++ |..||...+..+
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~  247 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  247 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC-chhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            9999999999999998765432222222334567889999999776664 78999999999999998 889998888877


Q ss_pred             HHHHHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          220 MYRKIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       220 ~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ....+.... ...+..++.++.++|.+||.++|.+|||+.++++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         248 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            777765543 34556688999999999999999999999999875


No 292
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00  E-value=4.3e-41  Score=330.82  Aligned_cols=254  Identities=22%  Similarity=0.396  Sum_probs=206.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +.|+..+.||+|+||.||++.+..+++.||+|.+......  .....+.+|+.++.++. ||||+++++++..++..|++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~   81 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC   81 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence            4677889999999999999999999999999998765422  33467889999999986 99999999999999999999


Q ss_pred             EEecCCC--cccchhc---cCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           89 MEYVKGG--ELFGKVA---KGKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        89 ~E~~~gg--~L~~~i~---~~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |||+.+.  ++...+.   .+.+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++......
T Consensus        82 ~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          82 MELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             EecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            9998642  2333321   35799999999999999999999975 9999999999999999999999999998765432


Q ss_pred             cCCCccccccCCCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCcH-HHHHHHHhccC-CCC----CCC
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSNL-MEMYRKIGKAE-FKF----PNW  234 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-~~~~~~i~~~~-~~~----~~~  234 (472)
                      ..   .....|++.|+|||++.+.  ...+.++|||||||++|+|++|+.||..... .+....+.... ...    +..
T Consensus       162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd06616         162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE  238 (288)
T ss_pred             Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence            21   2344689999999998765  2345799999999999999999999976542 22223332222 122    223


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      +++++.+||.+||..||++|||+++|+.||||+.
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            7889999999999999999999999999999976


No 293
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00  E-value=1.1e-40  Score=327.72  Aligned_cols=254  Identities=30%  Similarity=0.540  Sum_probs=219.1

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ..+.|++.+.||+|+||.||.+.+..++..||+|++.....    ..+.+.+|+.+++.++|+||+++++++...+..|+
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   92 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV   92 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence            45679999999999999999999988999999999976542    34678899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ++||+.|++|.+++...  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++........ 
T Consensus        93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  171 (286)
T cd06614          93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-  171 (286)
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence            99999999999999774  799999999999999999999999999999999999999999999999998875543221 


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCC--CCCCCHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKF--PNWFAPEVRRL  242 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~--~~~~s~~l~~l  242 (472)
                       ......+++.|+|||.+.+..++ .++|+||||+++|+|++|..||...+.......+.... ...  +..++.++.++
T Consensus       172 -~~~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  249 (286)
T cd06614         172 -KRNSVVGTPYWMAPEVIKRKDYG-PKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDF  249 (286)
T ss_pred             -hhccccCCcccCCHhHhcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHH
Confidence             12344688999999998776654 78999999999999999999998877665544443322 222  23378899999


Q ss_pred             HhcccCCCCCCcCChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      |.+||+.+|.+|||+.++++|+||.+
T Consensus       250 i~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         250 LNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHHHhccChhhCcCHHHHhhChHhhc
Confidence            99999999999999999999999987


No 294
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00  E-value=3.2e-41  Score=338.56  Aligned_cols=257  Identities=30%  Similarity=0.464  Sum_probs=216.1

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-----EE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-----KI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~   85 (472)
                      ||++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+.+|+.+++.++||||+++++++....     .+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            79999999999999999999998999999999876432 1234567889999999999999999999987765     89


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |++|||+. ++|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++........
T Consensus        80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            99999997 478888866 5899999999999999999999999999999999999999999999999999886544321


Q ss_pred             -CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC--------------
Q 012021          165 -DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF--------------  229 (472)
Q Consensus       165 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~--------------  229 (472)
                       ........+|+.|+|||++.+....+.++|+||||+++|+|++|..||...+..+.+..+.....              
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  238 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK  238 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence             01234456899999999998774455899999999999999999999988877665555432110              


Q ss_pred             -----------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          230 -----------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       230 -----------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                       ...+.+++++.++|.+||+.+|.+|||+++++.||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence                             0112367889999999999999999999999999999863


No 295
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00  E-value=5e-41  Score=337.50  Aligned_cols=254  Identities=20%  Similarity=0.360  Sum_probs=204.1

Q ss_pred             eeEccc--CCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQG--TFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G--~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      ..||.|  +||+||+|.+..+|+.||+|++...... ....+.+++|+.+++.++||||+++++++..++..|+||||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            456666  9999999999999999999998765432 2445789999999999999999999999999999999999999


Q ss_pred             CCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC----
Q 012021           94 GGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG----  166 (472)
Q Consensus        94 gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~----  166 (472)
                      +++|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+..........    
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence            9999988865   358999999999999999999999999999999999999999999999998654332211110    


Q ss_pred             -ccccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC---------------
Q 012021          167 -LLHTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF---------------  229 (472)
Q Consensus       167 -~~~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~---------------  229 (472)
                       ......++..|+|||++.+.. ..+.++|||||||++|+|++|..||.................               
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR  242 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence             011123567799999986542 235789999999999999999999987654433322221110               


Q ss_pred             --------------------------------CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          230 --------------------------------KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       230 --------------------------------~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                                      ..+..+++++.+||++||..||++|||+.++++||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence                                            01122567899999999999999999999999999998643


No 296
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=9.8e-41  Score=336.24  Aligned_cols=256  Identities=22%  Similarity=0.422  Sum_probs=213.3

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCC-------CcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKT-------GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELY   76 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-------g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~   76 (472)
                      .++...+|++++.||+|+||.||+|++...       +..||+|.+....  .....+.+.+|+.+++++ +||||++++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLL   84 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence            456667899999999999999999987542       2369999886432  223456788999999999 799999999


Q ss_pred             EEEEeCCEEEEEEEecCCCcccchhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 012021           77 EVMASKTKIYFVMEYVKGGELFGKVAK-----------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPEN  139 (472)
Q Consensus        77 ~~~~~~~~~~lV~E~~~gg~L~~~i~~-----------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~N  139 (472)
                      +++...+.+|++|||+.+|+|.+++..                 ..++...+..++.||+.||.|||++|++||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  164 (334)
T cd05100          85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN  164 (334)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            999999999999999999999998753                 136778899999999999999999999999999999


Q ss_pred             EEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHH
Q 012021          140 LLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLM  218 (472)
Q Consensus       140 ILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~  218 (472)
                      ||++.++.+||+|||+++...............++..|+|||++.+..+. .++||||||+++|+|++ |..||...+..
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~  243 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVE  243 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcC-chhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999998755432211112223345679999999776665 78999999999999998 89999988877


Q ss_pred             HHHHHHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          219 EMYRKIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       219 ~~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.+..+.... ...+..++.++.++|.+||+.+|.+|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         244 ELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            7777765543 35566688999999999999999999999999987


No 297
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00  E-value=1.2e-40  Score=326.90  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=207.3

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcE----EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMS----VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      -.++|++++.||+|+||+||+|.+..+++.    +++|.+....  .......+..|+.+++.++||||+++++++. ..
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~   81 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GA   81 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CC
Confidence            356899999999999999999999887774    6677764322  1233467788888999999999999999875 45


Q ss_pred             EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ..++++||+.+|+|.+++..  +.+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            67899999999999999864  5789999999999999999999999999999999999999999999999999876543


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHH
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEV  239 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l  239 (472)
                      ...........++..|+|||.+.+..++ .++||||||+++|+|++ |..||.+.........+..+. ...+...+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFGRYT-HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDV  240 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccCCcC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHH
Confidence            2222222344577889999998766654 89999999999999998 999998877666555554443 34455577899


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+++.+||..||++|||+.++++.
T Consensus       241 ~~li~~c~~~~p~~Rps~~el~~~  264 (279)
T cd05111         241 YMVMVKCWMIDENVRPTFKELANE  264 (279)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999999763


No 298
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00  E-value=9.3e-41  Score=323.21  Aligned_cols=245  Identities=25%  Similarity=0.372  Sum_probs=204.9

Q ss_pred             eeEcccCCeEEEEEEE--cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQGTFAKVHYARN--LKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      +.||+|+||+||+|.+  ..++..+|+|++..... .....+.+.+|+.+++.++||||+++++++. ....++||||+.
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~   78 (257)
T cd05116           1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE   78 (257)
T ss_pred             CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence            3689999999999964  45788999999865432 2345678899999999999999999999875 456789999999


Q ss_pred             CCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC-ccccc
Q 012021           94 GGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG-LLHTT  171 (472)
Q Consensus        94 gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~-~~~~~  171 (472)
                      +++|.+++.. +.+++..+..++.|++.||.|||++||+||||||.||+++.++.+||+|||++.......... .....
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence            9999998865 579999999999999999999999999999999999999999999999999987654322110 01223


Q ss_pred             cCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhcccCC
Q 012021          172 CGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       172 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~  249 (472)
                      .+++.|+|||.+....+ +.++|+|||||++|+|++ |..||.+.+.......+..+. ...|..+++++.++|.+||+.
T Consensus       159 ~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~  237 (257)
T cd05116         159 KWPVKWYAPECMNYYKF-SSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTY  237 (257)
T ss_pred             CCCccccCHhHhccCCc-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhcc
Confidence            44678999999866554 478999999999999998 999999887777777666543 466777999999999999999


Q ss_pred             CCCCcCChhhhhcC
Q 012021          250 NPNTRISMTKIMEN  263 (472)
Q Consensus       250 dP~~Rpt~~eil~h  263 (472)
                      ||++||++++|...
T Consensus       238 ~p~~Rp~~~~i~~~  251 (257)
T cd05116         238 GVDERPGFAVVELR  251 (257)
T ss_pred             CchhCcCHHHHHHH
Confidence            99999999999753


No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00  E-value=2e-40  Score=331.51  Aligned_cols=256  Identities=27%  Similarity=0.430  Sum_probs=216.8

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ...|+..+.||+|+||.||++.+..++..||+|.+.............+.+|+.+++.++|||++++++++.+++..|+|
T Consensus        24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence            34588999999999999999999999999999999765444445567788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.| +|.+.+.  .+.+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....     
T Consensus       104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-----  177 (317)
T cd06635         104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-----  177 (317)
T ss_pred             EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence            999975 6666653  36799999999999999999999999999999999999999999999999998765432     


Q ss_pred             ccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-C-CCCCCHHHHHH
Q 012021          167 LLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-F-PNWFAPEVRRL  242 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-~-~~~~s~~l~~l  242 (472)
                       .....|++.|+|||.+..  .+..+.++|||||||++|+|++|..||...+.......+...... . +..+++.+.++
T Consensus       178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  256 (317)
T cd06635         178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF  256 (317)
T ss_pred             -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHH
Confidence             234578999999999742  233457899999999999999999999887766655555544322 2 23478899999


Q ss_pred             HhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      |.+||+.+|.+||++.++++|+|+.....
T Consensus       257 i~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         257 VDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             HHHHccCCcccCcCHHHHHhChhhhccCc
Confidence            99999999999999999999999976443


No 300
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00  E-value=7.3e-41  Score=338.49  Aligned_cols=254  Identities=31%  Similarity=0.479  Sum_probs=208.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-----
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK-----   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   82 (472)
                      +.++|.+.+.||+|+||.||+|.+..+|+.||+|.+.+... .......+.+|+.+++.++||||+++++++...     
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence            46799999999999999999999999999999999875432 223345678999999999999999999998654     


Q ss_pred             -CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           83 -TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                       ..+|+|+||+.. +|.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879          92 FQDFYLVMPYMQT-DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA  169 (342)
T ss_pred             CceEEEEeccccc-CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence             357999999964 565544 34699999999999999999999999999999999999999999999999999875432


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc--------------
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA--------------  227 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~--------------  227 (472)
                      .     .....+|+.|+|||.+.+....+.++|||||||++|+|++|+.||.+.+....+..+...              
T Consensus       170 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T cd07879         170 E-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED  244 (342)
T ss_pred             C-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence            1     234567899999999876444558999999999999999999999887655444433221              


Q ss_pred             ---------CCCC--------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---------EFKF--------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---------~~~~--------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                               ....        .+..++++.+||.+||+.||++|||+++++.||||+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence                     0000        12357789999999999999999999999999999864


No 301
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00  E-value=4.3e-41  Score=340.35  Aligned_cols=255  Identities=25%  Similarity=0.416  Sum_probs=205.7

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEE-----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARN-----LKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVM   79 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~   79 (472)
                      ..-.+||++++.||+|+||+||+|.+     ..+++.||||++.....  ......+.+|+.++..+ +||||+++++++
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGAC   80 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence            34457999999999999999999985     35678999999975432  23346788999999999 689999999987


Q ss_pred             Ee-CCEEEEEEEecCCCcccchhcc-------------------------------------------------------
Q 012021           80 AS-KTKIYFVMEYVKGGELFGKVAK-------------------------------------------------------  103 (472)
Q Consensus        80 ~~-~~~~~lV~E~~~gg~L~~~i~~-------------------------------------------------------  103 (472)
                      .. +..+|++|||+++|+|.+++..                                                       
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
T cd05103          81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD  160 (343)
T ss_pred             ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence            54 4578999999999999888743                                                       


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccc
Q 012021          104 -------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHT  170 (472)
Q Consensus       104 -------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~  170 (472)
                                   ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  240 (343)
T cd05103         161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD  240 (343)
T ss_pred             chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence                         1367788899999999999999999999999999999999999999999999876532221111123


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHH-HHHHHHhc-cCCCCCCCCCHHHHHHHhccc
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLM-EMYRKIGK-AEFKFPNWFAPEVRRLLSKIL  247 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~-~~~~~i~~-~~~~~~~~~s~~l~~li~~~L  247 (472)
                      ..+++.|+|||++.+..+. .++||||||+++|+|++ |..||...... .....+.. .....|.+.++++.+++.+||
T Consensus       241 ~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl  319 (343)
T cd05103         241 ARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW  319 (343)
T ss_pred             CCCCcceECcHHhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHc
Confidence            3456789999998776664 78999999999999996 99999775433 22333322 234566778899999999999


Q ss_pred             CCCCCCcCChhhhhcC
Q 012021          248 DPNPNTRISMTKIMEN  263 (472)
Q Consensus       248 ~~dP~~Rpt~~eil~h  263 (472)
                      ..||++|||+.+|++|
T Consensus       320 ~~~p~~Rps~~eil~~  335 (343)
T cd05103         320 HGEPSQRPTFSELVEH  335 (343)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999987


No 302
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=1.2e-40  Score=364.29  Aligned_cols=149  Identities=33%  Similarity=0.656  Sum_probs=139.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +++|++++.||.|+||+||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++++...+.+|+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            57899999999999999999999999999999999876555555667899999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      |||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999999865 678999999999999999999999999999999999999999999999999875


No 303
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-42  Score=318.17  Aligned_cols=253  Identities=28%  Similarity=0.463  Sum_probs=207.3

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE-----eC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA-----SK   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-----~~   82 (472)
                      ..+||++.+.||+|||+.||++.+..+++.+|+|.+.....   +..+...+|++..++++|||+++++++..     ..
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence            35599999999999999999999999999999999977652   44678899999999999999999998752     33


Q ss_pred             CEEEEEEEecCCCcccchhcc----C-CCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           83 TKIYFVMEYVKGGELFGKVAK----G-KLKEDAARKYFQQLISAVDYCHSRG--VCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~----~-~l~e~~~~~i~~ql~~aL~yLH~~g--iiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                      ...|+++.|...|+|.+.+..    | -++|.++..|+.+|++||++||+..  ++||||||.|||+.+.+.++|.|||.
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence            459999999999999998853    3 5999999999999999999999998  99999999999999999999999998


Q ss_pred             hhhhhcccCCCc-------cccccCCCcccChhhhcccCCC--CCcccchhhhHHHHHHhcCCCCCCCCcH--HHHHHHH
Q 012021          156 SALAESKHQDGL-------LHTTCGTPAYVAPEVINRRGYD--GSKADIWSCGVILYVLLAGYLPFHDSNL--MEMYRKI  224 (472)
Q Consensus       156 a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwSlGvil~~lltG~~Pf~~~~~--~~~~~~i  224 (472)
                      ++...-.-....       -.....|..|+|||.+.-+.+.  +.++|||||||+||+|+.|.-||+..-.  ..+.-.+
T Consensus       176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv  255 (302)
T KOG2345|consen  176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV  255 (302)
T ss_pred             ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence            875543211110       1122468999999998654332  5799999999999999999999964211  0111123


Q ss_pred             hccCCCCCC--CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          225 GKAEFKFPN--WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       225 ~~~~~~~~~--~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..+.+.+|.  .+|..+.++|+.||+.||.+||++.+++.+
T Consensus       256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            344555554  389999999999999999999999999875


No 304
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00  E-value=1.5e-40  Score=323.64  Aligned_cols=252  Identities=23%  Similarity=0.389  Sum_probs=211.0

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGM---SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+.|++.+.||+|+||.||+|.+..+++   .||||.+....  .......+.+|+.+++.++||||+++++++.++...
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   80 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV   80 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence            4579999999999999999999887665   69999986542  233457789999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+||||+.+++|.+++..  +.+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence            999999999999988864  568999999999999999999999999999999999999999999999999987654322


Q ss_pred             CCCcccccc---CCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHH
Q 012021          164 QDGLLHTTC---GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPE  238 (472)
Q Consensus       164 ~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~  238 (472)
                      .........   ++..|+|||.+....+. .++|||||||++|++++ |..||...+.......+... ....+..++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTA  239 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCccc-chhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHH
Confidence            211111111   24579999999776664 78999999999999886 99999887777666666443 23445567899


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcC
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.+++.+||..+|.+||++.+|+..
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~i~~~  264 (269)
T cd05065         240 LHQLMLDCWQKDRNARPKFGQIVST  264 (269)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999863


No 305
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.7e-41  Score=322.91  Aligned_cols=259  Identities=32%  Similarity=0.601  Sum_probs=231.4

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKI   85 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   85 (472)
                      +-.+.|++++.||+|+|++|.+++.+.|.+.+|+|+++++-+...+..+.+..|-.+...- +||.+|-++.+|.++..+
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            4567899999999999999999999999999999999999888777888999999988654 799999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ++|.||++||+|.-.+.+ ++++|+.++.|...|+.||.|||++||++||||.+|+|+|..|.+||.|+|+++.--  ..
T Consensus       327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l--~~  404 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL--GP  404 (593)
T ss_pred             EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC--CC
Confidence            999999999999666654 789999999999999999999999999999999999999999999999999987432  23


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-------CcH-HHHHHHHhccCCCCCCCCC
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-------SNL-MEMYRKIGKAEFKFPNWFA  236 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-------~~~-~~~~~~i~~~~~~~~~~~s  236 (472)
                      .....+.||||.|+|||++.+..| +...|.|+|||+++||++|+.||+-       .+. .-+++-|......+|..+|
T Consensus       405 gd~tstfcgtpnyiapeilrgeey-gfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls  483 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEY-GFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS  483 (593)
T ss_pred             CcccccccCCCcccchhhhccccc-CceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee
Confidence            345688999999999999998887 4999999999999999999999962       222 3456677788899999999


Q ss_pred             HHHHHHHhcccCCCCCCcCC------hhhhhcCccccc
Q 012021          237 PEVRRLLSKILDPNPNTRIS------MTKIMENSWFRK  268 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt------~~eil~h~~f~~  268 (472)
                      -.+..+++..|++||.+|..      ..+|..|+||+.
T Consensus       484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            99999999999999999984      579999999984


No 306
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00  E-value=1.5e-40  Score=322.25  Aligned_cols=248  Identities=25%  Similarity=0.402  Sum_probs=207.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||.||+|.+..+ ..+|+|.+.....    ..+.+.+|+.+++.++|||++++++++. .+..|
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   76 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY   76 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence            4567899999999999999999988554 4699998865432    2356788999999999999999999885 45689


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++|||+.+++|.+++..   ..+++..+..++.||+.||.|||++|++||||||+||++++++.++|+|||++.......
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05069          77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE  156 (260)
T ss_pred             EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence            99999999999998864   248999999999999999999999999999999999999999999999999987653321


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      . .......++..|+|||...+..+ +.++||||||+++|+|++ |..||.+....+....+... ....+..++..+.+
T Consensus       157 ~-~~~~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (260)
T cd05069         157 Y-TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHE  234 (260)
T ss_pred             c-cccCCCccchhhCCHHHhccCCc-ChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHH
Confidence            1 11122345678999999876654 489999999999999999 99999988777766666554 33456668899999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++++||.+||++||+++++++
T Consensus       235 li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         235 LMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999875


No 307
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=100.00  E-value=7.6e-41  Score=330.79  Aligned_cols=251  Identities=22%  Similarity=0.336  Sum_probs=204.7

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCC--------------cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeee
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTG--------------MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVE   74 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g--------------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~   74 (472)
                      .++|++.+.||+|+||.||+|++..++              ..||+|.+....  .....+.+.+|+++++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            468999999999999999999875432              359999987543  2234567899999999999999999


Q ss_pred             EEEEEEeCCEEEEEEEecCCCcccchhccC-------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 012021           75 LYEVMASKTKIYFVMEYVKGGELFGKVAKG-------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLL  141 (472)
Q Consensus        75 l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~-------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NIL  141 (472)
                      +++++......|+||||+.+++|.+++...             .+++..+..++.|++.||.|||++|++||||||+||+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil  161 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL  161 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence            999999999999999999999998887432             3688899999999999999999999999999999999


Q ss_pred             EcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc--CCCCCCCCcHHH
Q 012021          142 LDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA--GYLPFHDSNLME  219 (472)
Q Consensus       142 ld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt--G~~Pf~~~~~~~  219 (472)
                      ++.++.+||+|||++................+++.|+|||++....+ +.++|||||||++|+|++  |..||...+...
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~  240 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF-TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ  240 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc-CchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence            99999999999999875432221111223345778999999876665 489999999999999988  778888766555


Q ss_pred             HHHHHhc--------cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          220 MYRKIGK--------AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       220 ~~~~i~~--------~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ....+..        .....++.+++.+.+||.+||+.||++|||+++|++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         241 VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            4443321        112334557899999999999999999999999965


No 308
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00  E-value=1.5e-40  Score=322.13  Aligned_cols=249  Identities=24%  Similarity=0.416  Sum_probs=209.6

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+..++|++++.||+|+||.||+|.+ .+++.||+|.+......    ...+.+|+.+++.++||||+++++++. .+..
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~   75 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI   75 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence            46678999999999999999999986 46788999998765432    357889999999999999999999874 4578


Q ss_pred             EEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |++|||+.+++|.+++..   ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN  155 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence            999999999999998754   46899999999999999999999999999999999999999999999999998755421


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ... ......++..|+|||.+....+ +.++||||||+++|++++ |++||.+.+.......+... ....+...+.++.
T Consensus       156 ~~~-~~~~~~~~~~y~~pe~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (260)
T cd05067         156 EYT-AREGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELY  233 (260)
T ss_pred             Ccc-cccCCcccccccCHHHhccCCc-CcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHH
Confidence            111 1122345678999999876655 478999999999999999 99999988777766666544 2345566889999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++|.+||..+|++|||++++++
T Consensus       234 ~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         234 ELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999875


No 309
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00  E-value=2.8e-40  Score=330.03  Aligned_cols=255  Identities=25%  Similarity=0.400  Sum_probs=213.9

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .+.|...+.||+|+||+||+|.+..+|+.||+|.+.............+.+|+.+++.++|||++++++++.+....|+|
T Consensus        20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            34577888999999999999999999999999999766544444556788999999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |||+.| +|.+.+..  +.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....      
T Consensus       100 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------  172 (313)
T cd06633         100 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------  172 (313)
T ss_pred             EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC------
Confidence            999964 67666643  578999999999999999999999999999999999999999999999999875422      


Q ss_pred             ccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-C-CCCCCCHHHHHH
Q 012021          167 LLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-K-FPNWFAPEVRRL  242 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~-~~~~~s~~l~~l  242 (472)
                      ......|+..|+|||.+..  .+..+.++||||||+++|+|++|..||...+.......+..... . ....++..+.+|
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  252 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGF  252 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHH
Confidence            1234578999999999742  23345789999999999999999999988776555555443322 1 223467889999


Q ss_pred             HhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      +.+||+.+|.+||++.+++.||||+...
T Consensus       253 i~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         253 VDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             HHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999999998643


No 310
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00  E-value=1.5e-40  Score=323.55  Aligned_cols=251  Identities=24%  Similarity=0.402  Sum_probs=210.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGM---SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .++|++++.||+|+||.||+|.+..++.   .+|+|.+.....  ....+.+.+|+.+++.++||||+++++++..++..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV   80 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            4689999999999999999999875544   799999865432  23456789999999999999999999999999999


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |+||||+++++|.+++..  +.+++.++..++.|++.||.|||++|++||||||+|||++.++.++|+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            999999999999999865  468999999999999999999999999999999999999999999999999988654322


Q ss_pred             CCCc-cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          164 QDGL-LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       164 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      .... .....++..|+|||.+.+..+ +.++|+||||+++|++++ |..||......+....+... ....+..+++++.
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALH  239 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCcc-CchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHH
Confidence            1110 111223568999999977665 489999999999999886 99999887776666666544 2344455789999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +++.+||+.+|..||++.++++
T Consensus       240 ~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         240 QLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHHcccCchhCCCHHHHHH
Confidence            9999999999999999999975


No 311
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00  E-value=1.2e-40  Score=327.91  Aligned_cols=252  Identities=26%  Similarity=0.366  Sum_probs=211.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      -.++|++.+.||+|+||.||+|.+..     ++..||+|.+.....  ......+.+|+.+++.++||||+++++++..+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            45789999999999999999998753     678999999865432  23456788999999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 012021           83 TKIYFVMEYVKGGELFGKVAK-----------------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPEN  139 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~-----------------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~N  139 (472)
                      ...|++|||+.+++|.+++..                       ..+++..++.++.||+.||.|||++|++||||||+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n  160 (288)
T cd05050          81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN  160 (288)
T ss_pred             CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence            999999999999999888753                       137888899999999999999999999999999999


Q ss_pred             EEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHH
Q 012021          140 LLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLM  218 (472)
Q Consensus       140 ILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~  218 (472)
                      |+++.++.++|+|||++................++..|+|||.+.+..+. .++|||||||++|+|++ |..||.+.+..
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~~~~~p~~~~~~~  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGMQPYYGMAHE  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999998754322211111223456779999998776654 79999999999999997 88999887777


Q ss_pred             HHHHHHhccCC-CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          219 EMYRKIGKAEF-KFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       219 ~~~~~i~~~~~-~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +....+..+.. ..|..++.++.++|.+||..+|.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         240 EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            77776665543 456678899999999999999999999999875


No 312
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00  E-value=1.6e-40  Score=328.63  Aligned_cols=252  Identities=21%  Similarity=0.348  Sum_probs=204.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcC----------------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLK----------------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN   71 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn   71 (472)
                      ..++|++.+.||+|+||+||++++..                ++..||+|++....  .......+.+|+.+++.++|||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~   80 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPN   80 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCC
Confidence            34689999999999999999986532                34579999986543  2234567889999999999999


Q ss_pred             eeeEEEEEEeCCEEEEEEEecCCCcccchhccC------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 012021           72 VVELYEVMASKTKIYFVMEYVKGGELFGKVAKG------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPEN  139 (472)
Q Consensus        72 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~N  139 (472)
                      |+++++++...+..|+||||+.+++|.+++...            .+++..+..++.||+.||.|||++|++||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N  160 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN  160 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence            999999999999999999999999999887542            36778899999999999999999999999999999


Q ss_pred             EEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc--CCCCCCCCcH
Q 012021          140 LLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA--GYLPFHDSNL  217 (472)
Q Consensus       140 ILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt--G~~Pf~~~~~  217 (472)
                      ||++.++.++|+|||++................+++.|+|||......+ +.++|||||||++|+|++  |..||...+.
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~DiwSlG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKF-TTASDVWAFGVTLWEILTLCKEQPYSQLSD  239 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCc-cchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence            9999999999999999875533221111222345678999998876655 489999999999999998  7899987665


Q ss_pred             HHHHHHHh--------ccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          218 MEMYRKIG--------KAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       218 ~~~~~~i~--------~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+......        ......+..+++.+.+|+.+||+.||++|||+.+|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         240 EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            55443321        1123345567899999999999999999999999975


No 313
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00  E-value=2.7e-40  Score=323.89  Aligned_cols=251  Identities=25%  Similarity=0.380  Sum_probs=212.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCc----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGM----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ..++|++++.||+|+||+||+|.+..+|+    .||+|.+.....  ......+.+|+.+++.++||||+++++++.. .
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   81 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-S   81 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence            45689999999999999999999877765    589998866542  2345678899999999999999999999987 7


Q ss_pred             EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ..++||||+.+|+|.+++..  +.+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            89999999999999998865  4699999999999999999999999999999999999999999999999999886543


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHH
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEV  239 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l  239 (472)
                      ...........++..|+|||.+....+. .++|+||||+++|++++ |..||......+....+..+. ...|...+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHRIYT-HKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDV  240 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcCCcC-chhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHH
Confidence            2221111122345689999998766554 79999999999999998 999999888777776666543 45666788999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhc
Q 012021          240 RRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+++.+||..||+.|||+.++++
T Consensus       241 ~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         241 YMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999875


No 314
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00  E-value=1.9e-40  Score=326.51  Aligned_cols=257  Identities=33%  Similarity=0.586  Sum_probs=215.0

Q ss_pred             CeEEEeeEcccCCeEEEEEEEc---CCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVL-KVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKI   85 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   85 (472)
                      +|++.+.||+|+||.||++.+.   .+++.||||.+.+.... .....+.+.+|+.+++.+ +||||+++++.+..+..+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4899999999999999999864   46789999998765432 223456788999999999 599999999999999999


Q ss_pred             EEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           86 YFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||||+.+++|.+.+.. +.+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            999999999999998865 5799999999999999999999999999999999999999999999999999876543221


Q ss_pred             CCccccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCCc----HHHHHHHHhccCCCCCCCCCHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDSN----LMEMYRKIGKAEFKFPNWFAPEV  239 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~~----~~~~~~~i~~~~~~~~~~~s~~l  239 (472)
                       ......+|++.|+|||.+.+.. ..+.++|+||||+++|+|++|..||....    ..+....+.......|..+++++
T Consensus       161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (288)
T cd05583         161 -ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEA  239 (288)
T ss_pred             -cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHH
Confidence             1123356899999999986543 24578999999999999999999996432    23444455556667777889999


Q ss_pred             HHHHhcccCCCCCCcCC---hhhhhcCccccc
Q 012021          240 RRLLSKILDPNPNTRIS---MTKIMENSWFRK  268 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt---~~eil~h~~f~~  268 (472)
                      .++|.+||+.||++|||   +.++++||||+.
T Consensus       240 ~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~  271 (288)
T cd05583         240 RDFIQKLLEKDPKKRLGANGADEIKNHPFFQG  271 (288)
T ss_pred             HHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence            99999999999999998   567799999975


No 315
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00  E-value=3.1e-40  Score=319.66  Aligned_cols=249  Identities=26%  Similarity=0.422  Sum_probs=212.0

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      +..++|++.+.||+|+||.||+|.+. ++..||||.+.....    ..+.+.+|+.+++.++||||+++++++......|
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY   77 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence            56789999999999999999999975 557899999876543    2356889999999999999999999999989999


Q ss_pred             EEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           87 FVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      +||||+++++|.+++..   ..+++..+..++.||+.|+.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE  157 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence            99999999999999865   368999999999999999999999999999999999999999999999999987654311


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                      .. ......++..|+|||.+.+..+ +.++|+||||+++|+|++ |+.||.+.+.......+... ....+...+.++.+
T Consensus       158 ~~-~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (261)
T cd05034         158 YT-AREGAKFPIKWTAPEAANYGRF-TIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYD  235 (261)
T ss_pred             hh-hhhccCCCccccCHHHhccCCc-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            11 0112234568999999876655 488999999999999998 99999888777777776554 34456667899999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++.+||..+|.+||+++++++
T Consensus       236 ~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         236 LMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHHcccCcccCCCHHHHHH
Confidence            999999999999999999874


No 316
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00  E-value=6.6e-41  Score=327.66  Aligned_cols=251  Identities=32%  Similarity=0.511  Sum_probs=211.4

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |++.+.||+|++|.||+|.+..+|+.+|+|.+...... ......+.+|+.+++.++||||+++++++..++..|+|+||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence            67889999999999999999999999999998765432 23456788999999999999999999999999999999999


Q ss_pred             cCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           92 VKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        92 ~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      +.+ +|.+.+..  +.+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......  ....
T Consensus        80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~~  156 (283)
T cd05118          80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYT  156 (283)
T ss_pred             cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cccc
Confidence            975 77777755  489999999999999999999999999999999999999999999999999987654432  1223


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-------------------CC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-------------------FK  230 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-------------------~~  230 (472)
                      ...++..|+|||.+.+....+.++|+||||+++|+|++|+.||...+..+.+.++....                   ..
T Consensus       157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence            34688899999998776445689999999999999999999998877665554442210                   00


Q ss_pred             -----------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          231 -----------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       231 -----------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                                 ..+.++.++.++|.+||.+||.+||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                       112357889999999999999999999999999997


No 317
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00  E-value=6.3e-41  Score=325.62  Aligned_cols=247  Identities=31%  Similarity=0.528  Sum_probs=203.7

Q ss_pred             EEEeeEcccCCeEEEEEEEc----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           13 ELGRLLGQGTFAKVHYARNL----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .+.+.||.|+||.||.|...    ..+..|+||.+....  .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv   79 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV   79 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--ccccceeeeeccccccccccccccccccccccccccccc
Confidence            57899999999999999997    356789999995432  223467889999999999999999999999988889999


Q ss_pred             EEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           89 MEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |||+++|+|.+++...   .+++.....++.||+.||.|||+++++|+||+|.|||++.++.+||+|||++.........
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999998764   7999999999999999999999999999999999999999999999999998766322111


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li  243 (472)
                      .......+...|+|||.+....+ +.++||||||+++||+++ |..||.+.+..+...++.... ...+..++..+.++|
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  238 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEY-TKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLI  238 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEE-SHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHH
T ss_pred             ccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHH
Confidence            11233456778999999877665 489999999999999999 789999988888777775543 455667899999999


Q ss_pred             hcccCCCCCCcCChhhhhc
Q 012021          244 SKILDPNPNTRISMTKIME  262 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+||..||.+|||+.+|++
T Consensus       239 ~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  239 QQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHT-SSGGGS--HHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHh
Confidence            9999999999999999975


No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00  E-value=8.9e-42  Score=317.36  Aligned_cols=253  Identities=28%  Similarity=0.462  Sum_probs=210.7

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ..+.+..||.|+.|.|++++.+.+|...|||.+.+..  +.+..+++...+.++-..+ .|+||+.+|+|..+..+++.|
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM  170 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM  170 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence            3456788999999999999999999999999997664  3355677878888776654 899999999999999999999


Q ss_pred             EecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           90 EYVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        90 E~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      |.+.. -+..++.  +++++|..+-++...++.||.||.++ ||+|||+||.|||+|+.|++|+||||++........  
T Consensus       171 elMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--  247 (391)
T KOG0983|consen  171 ELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--  247 (391)
T ss_pred             HHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc--
Confidence            98843 2333333  37899999999999999999999965 999999999999999999999999999876654332  


Q ss_pred             ccccccCCCcccChhhhccc---CCCCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHhccCCCC-CC--CCCHHH
Q 012021          167 LLHTTCGTPAYVAPEVINRR---GYDGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIGKAEFKF-PN--WFAPEV  239 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~~~~~~~-~~--~~s~~l  239 (472)
                       .+...|.+.|||||.+...   .|+ .++||||||++|+||.||..||...+ ..+...++....++. |.  .+|+.+
T Consensus       248 -htrsAGC~~YMaPERidp~~~~kYD-iRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F  325 (391)
T KOG0983|consen  248 -HTRSAGCAAYMAPERIDPPDKPKYD-IRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDF  325 (391)
T ss_pred             -cccccCCccccCccccCCCCCCccc-hhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHH
Confidence             2456799999999998543   354 78999999999999999999998844 456777777655433 32  389999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      .+|+..||..|+.+||.+.++|+|||+....
T Consensus       326 ~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  326 QSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             HHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            9999999999999999999999999998643


No 319
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=100.00  E-value=3.3e-40  Score=318.71  Aligned_cols=244  Identities=26%  Similarity=0.484  Sum_probs=210.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -.+.|++.+.||.|+||.||+|.+  .|+.||+|.+.....    ..+++.+|+.+++.++|+||+++++++.+.+..|+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence            456899999999999999999987  589999999865532    35778899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           88 VMEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      ||||+++++|.+++...   .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....... 
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-  156 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-  156 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence            99999999999998652   69999999999999999999999999999999999999999999999999987653211 


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRL  242 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~l  242 (472)
                          ....++..|+|||.+....+ +.++||||||+++|++++ |..||...+.......+... ....+..+++++.++
T Consensus       157 ----~~~~~~~~~~ape~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  231 (256)
T cd05039         157 ----DSGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKV  231 (256)
T ss_pred             ----ccCCCcccccCchhhcCCcC-CcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHH
Confidence                12345667999999876555 478999999999999997 99999888777666665544 345566789999999


Q ss_pred             HhcccCCCCCCcCChhhhhcC
Q 012021          243 LSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h  263 (472)
                      |.+||..+|++|||+.++++.
T Consensus       232 i~~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         232 MKDCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             HHHHhccChhhCcCHHHHHHH
Confidence            999999999999999999863


No 320
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00  E-value=1.6e-40  Score=342.81  Aligned_cols=255  Identities=23%  Similarity=0.386  Sum_probs=209.1

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNL-----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVM   79 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~   79 (472)
                      .+-.++|.+++.||+|+||.||+|++.     .+++.||+|++.....  ......+.+|+.+|..+. ||||+++++++
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~  110 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGAC  110 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence            455668999999999999999999964     3457899999975432  233457889999999997 99999999999


Q ss_pred             EeCCEEEEEEEecCCCcccchhccC-------------------------------------------------------
Q 012021           80 ASKTKIYFVMEYVKGGELFGKVAKG-------------------------------------------------------  104 (472)
Q Consensus        80 ~~~~~~~lV~E~~~gg~L~~~i~~~-------------------------------------------------------  104 (472)
                      ...+..|+||||+.+|+|.+++...                                                       
T Consensus       111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (401)
T cd05107         111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV  190 (401)
T ss_pred             ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence            9999999999999999999887431                                                       


Q ss_pred             --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 012021          105 --------------------------------------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENL  140 (472)
Q Consensus       105 --------------------------------------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NI  140 (472)
                                                                  .+++..++.++.||+.||.|||++|++||||||+||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni  270 (401)
T cd05107         191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV  270 (401)
T ss_pred             chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence                                                        256677889999999999999999999999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHH
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLME  219 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~  219 (472)
                      |++.++.+||+|||++................+++.|+|||.+.+..+ +.++||||||+++|+|++ |..||......+
T Consensus       271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~e~l~~g~~P~~~~~~~~  349 (401)
T cd05107         271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY-TTLSDVWSFGILLWEIFTLGGTPYPELPMNE  349 (401)
T ss_pred             EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCC-CcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence            999999999999999876533221111233467889999999977665 478999999999999998 899998755444


Q ss_pred             HH-HHHhcc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          220 MY-RKIGKA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       220 ~~-~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .. ..+..+ ....|..++.++.+++.+||..+|.+||++++|++.
T Consensus       350 ~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         350 QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            33 333333 345667789999999999999999999999999875


No 321
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00  E-value=3.7e-40  Score=318.67  Aligned_cols=243  Identities=29%  Similarity=0.492  Sum_probs=207.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEE-EeCCEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVM-ASKTKI   85 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~~~~~~   85 (472)
                      +-+.+|++.+.||+|+||.||++..  .|..||+|.+....     ..+.+.+|+.+++.++|+|++++++++ ..++..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   75 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence            3456899999999999999999976  58899999985432     245688999999999999999999975 556789


Q ss_pred             EEEEEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |++|||+++++|.+++...   .+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  155 (256)
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence            9999999999999988652   4889999999999999999999999999999999999999999999999988754321


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      .     ....++..|+|||++....+. .++|||||||++|+|++ |..||...+.......+... ....+..+++.+.
T Consensus       156 ~-----~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (256)
T cd05082         156 Q-----DTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVY  229 (256)
T ss_pred             C-----CCCccceeecCHHHHccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence            1     233456789999998776654 78999999999999997 99999888777776666544 3445667899999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++|.+||..+|++|||+.++++
T Consensus       230 ~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         230 DVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999975


No 322
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-41  Score=345.81  Aligned_cols=253  Identities=24%  Similarity=0.417  Sum_probs=216.6

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ..|..+...++..||+|.||+||+|++-.   .||||+++...... +.++.+++|+.+++.-+|.||+-+.|++.....
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             cccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            45667778899999999999999999854   49999998776554 578999999999999999999999999988887


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                       .||+.+|+|.+|+.++.-  -+|.....+.|++||+.|+.|||.++|||||||..||+|.+++.|||+||||+.....-
T Consensus       463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w  541 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW  541 (678)
T ss_pred             -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence             999999999999999864  57999999999999999999999999999999999999999999999999999865544


Q ss_pred             cCCCccccccCCCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-----CCCCC
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-----FPNWF  235 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~  235 (472)
                      ..+..+...-|...|||||++...  ...++.+||||||+++|||+||.+||...+...++-.+.++...     .-...
T Consensus       542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~  621 (678)
T KOG0193|consen  542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNC  621 (678)
T ss_pred             ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccC
Confidence            444456667789999999998543  22358999999999999999999999966666665555555322     12235


Q ss_pred             CHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          236 APEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       236 s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +.++++|+..||..++++||.+.+||.
T Consensus       622 pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  622 PKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            669999999999999999999999987


No 323
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00  E-value=4.6e-40  Score=318.18  Aligned_cols=243  Identities=26%  Similarity=0.388  Sum_probs=203.3

Q ss_pred             eeEcccCCeEEEEEEEcCCC---cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEec
Q 012021           16 RLLGQGTFAKVHYARNLKTG---MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~   92 (472)
                      +.||+|+||.||+|.+..++   ..+|+|.+......  ...+.+.+|+.+++.++||||+++++++. ....++||||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence            47999999999999876655   78999998766532  34567889999999999999999999876 45689999999


Q ss_pred             CCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC-cccc
Q 012021           93 KGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG-LLHT  170 (472)
Q Consensus        93 ~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~-~~~~  170 (472)
                      .+++|.+++.. +.+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++.......... ....
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence            99999999976 459999999999999999999999999999999999999999999999999987654322110 0111


Q ss_pred             ccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhcccC
Q 012021          171 TCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSKILD  248 (472)
Q Consensus       171 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~~L~  248 (472)
                      ..++..|+|||.+....+. .++||||||+++|++++ |..||...+.......+.... ...|..+++.+.++|.+||.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  236 (257)
T cd05060         158 GRWPLKWYAPECINYGKFS-SKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWK  236 (257)
T ss_pred             ccccccccCHHHhcCCCCC-ccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence            1234679999998776654 79999999999999998 999998877766666665443 35667789999999999999


Q ss_pred             CCCCCcCChhhhhc
Q 012021          249 PNPNTRISMTKIME  262 (472)
Q Consensus       249 ~dP~~Rpt~~eil~  262 (472)
                      ++|++|||+.++++
T Consensus       237 ~~p~~Rp~~~~l~~  250 (257)
T cd05060         237 YRPEDRPTFSELES  250 (257)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999975


No 324
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=100.00  E-value=5.5e-40  Score=319.36  Aligned_cols=254  Identities=23%  Similarity=0.355  Sum_probs=211.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGM---SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      +..++|+..+.||+|+||.||+|.+..++.   .+|+|.+.....  ....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (268)
T cd05063           2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT--EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK   79 (268)
T ss_pred             CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence            345689999999999999999999876655   799999865432  233567889999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ..|+||||+++++|.+++..  +.+++..+..++.|++.|+.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            99999999999999998854  5799999999999999999999999999999999999999999999999999875543


Q ss_pred             ccCCCcc-ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHH
Q 012021          162 KHQDGLL-HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPE  238 (472)
Q Consensus       162 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~  238 (472)
                      ....... .....++.|+|||.+....++ .++|||||||++|+|++ |..||...+.......+... ....+..++.+
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  238 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFT-SASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSA  238 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCcC-hHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHH
Confidence            2211111 112234579999998776654 89999999999999997 99999887777777766543 22334457899


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcC
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.+++.+||..+|+.||++.++++.
T Consensus       239 ~~~li~~c~~~~p~~Rp~~~~i~~~  263 (268)
T cd05063         239 VYQLMLQCWQQDRARRPRFVDIVNL  263 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999999863


No 325
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00  E-value=3e-40  Score=328.94  Aligned_cols=255  Identities=25%  Similarity=0.406  Sum_probs=213.5

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      ...+|...+.||+|+||.||+|++..+++.||+|.+.............+.+|+.+++.++|||++++++++......|+
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            34568889999999999999999999999999999875443333445678899999999999999999999999999999


Q ss_pred             EEEecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||+. |+|.+.+.  ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....    
T Consensus        93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----  167 (308)
T cd06634          93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (308)
T ss_pred             EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC----
Confidence            999996 46766653  35689999999999999999999999999999999999999999999999998875432    


Q ss_pred             CccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-C-CCCCCCHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-K-FPNWFAPEVRR  241 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~-~~~~~s~~l~~  241 (472)
                        .....|++.|+|||.+.+  .+..+.++|||||||++|+|++|..||...+.......+..... . .+..++..+.+
T Consensus       168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (308)
T cd06634         168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  245 (308)
T ss_pred             --cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHH
Confidence              134568999999999753  22335789999999999999999999987665544444443332 2 23357889999


Q ss_pred             HHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          242 LLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      +|.+||..+|.+||++.++++|||+...
T Consensus       246 li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         246 FVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            9999999999999999999999999763


No 326
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-41  Score=299.35  Aligned_cols=255  Identities=31%  Similarity=0.523  Sum_probs=214.8

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|.-.++||+|+||+||+|+++.+++.||+|.+....- ..+.-....+||.+|+.++|.|||+++++..++.++-+|+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence            467778899999999999999999999999999976543 2344566789999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |||.. +|..+...  |.++.+.++.++.|++.||.|||++++.|||+||.|+||+.||.+|++|||+|+.++.+-.  -
T Consensus        81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr--c  157 (292)
T KOG0662|consen   81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--C  157 (292)
T ss_pred             HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE--e
Confidence            99954 67666654  7899999999999999999999999999999999999999999999999999987654321  2


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-------CC----CCC---
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-------EF----KFP---  232 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-------~~----~~~---  232 (472)
                      ....+-|.+|.+|.++.+...++...|+||-|||+.|+.. |++.|.+.+..+...+|-+.       .+    .+|   
T Consensus       158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk  237 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK  237 (292)
T ss_pred             eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence            3445679999999999888877789999999999999986 77778888877776666321       00    011   


Q ss_pred             ------C---------CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          233 ------N---------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       233 ------~---------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                            .         .++..-++++.++|.-+|.+|+++++.++||||..
T Consensus       238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence                  1         12345678999999999999999999999999975


No 327
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00  E-value=6.4e-40  Score=317.92  Aligned_cols=243  Identities=26%  Similarity=0.395  Sum_probs=201.9

Q ss_pred             eEcccCCeEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           17 LLGQGTFAKVHYARNL--KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      .||+|+||.||+|.+.  .++..||+|++....  .....+.+.+|+.+++.++||||+++++++. ....|+||||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            4899999999999775  445679999986543  2234567899999999999999999999885 4578999999999


Q ss_pred             Ccccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC-ccccc
Q 012021           95 GELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG-LLHTT  171 (472)
Q Consensus        95 g~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~-~~~~~  171 (472)
                      ++|.+++..  +.+++..+++++.||+.||.|||++|++||||||+|||++.++.+||+|||++.......... .....
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            999998853  579999999999999999999999999999999999999999999999999987553322111 01112


Q ss_pred             cCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccCC
Q 012021          172 CGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILDP  249 (472)
Q Consensus       172 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~  249 (472)
                      .+++.|+|||.+....+ +.++||||||+++|++++ |..||...........+..+ ...+|...++++.++|.+||..
T Consensus       159 ~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~  237 (257)
T cd05115         159 KWPLKWYAPECINFRKF-SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIY  237 (257)
T ss_pred             CCCcccCCHHHHccCCC-CchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            33578999999876665 478999999999999996 99999988777666666554 3566777899999999999999


Q ss_pred             CCCCcCChhhhhcC
Q 012021          250 NPNTRISMTKIMEN  263 (472)
Q Consensus       250 dP~~Rpt~~eil~h  263 (472)
                      +|++||++.+|.+.
T Consensus       238 ~~~~Rp~~~~i~~~  251 (257)
T cd05115         238 KWEDRPNFAKVEER  251 (257)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999753


No 328
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00  E-value=4.3e-40  Score=322.56  Aligned_cols=249  Identities=31%  Similarity=0.486  Sum_probs=205.6

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc---CCCCeeeEEEEEEeCCE----
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV---RHPNVVELYEVMASKTK----   84 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~~~~----   84 (472)
                      |++.+.||.|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+   +||||+++++++.....    
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            7899999999999999999988999999999975432 222334566788887766   59999999999987776    


Q ss_pred             -EEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           85 -IYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        85 -~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                       +|++|||+.+ +|.+++..   ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence             9999999975 78777754   358999999999999999999999999999999999999999999999999987654


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-----CC-----
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-----FK-----  230 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-----~~-----  230 (472)
                      ...   ......+++.|+|||++.+..+. .++|+||+||++|+|++|..||...+..+.+.++....     ..     
T Consensus       159 ~~~---~~~~~~~~~~~~~PE~~~~~~~~-~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         159 FEM---ALTSVVVTLWYRAPEVLLQSSYA-TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             CCc---ccccccccccccChHHhccCCCC-CcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence            322   12344578899999999776654 78999999999999999999998877666555543210     00     


Q ss_pred             ------C-----------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          231 ------F-----------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       231 ------~-----------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                            +           .+.+++.+.++|.+||+.||.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                  0           01245778899999999999999999999999997


No 329
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=100.00  E-value=1.7e-40  Score=324.55  Aligned_cols=251  Identities=34%  Similarity=0.541  Sum_probs=211.4

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+....|+||||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence            778899999999999999999999999999997654 2223446778899999999999999999999999999999999


Q ss_pred             cCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           92 VKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        92 ~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      +. ++|.+++...  .+++..++.++.|++.||.|||++||+||||+|+||+++.++.++|+|||++........  ...
T Consensus        80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~  156 (282)
T cd07829          80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYT  156 (282)
T ss_pred             cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccC
Confidence            97 4899988764  799999999999999999999999999999999999999999999999999876543221  223


Q ss_pred             cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc------------------CCCC
Q 012021          170 TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA------------------EFKF  231 (472)
Q Consensus       170 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~------------------~~~~  231 (472)
                      ...++..|+|||.+......+.++||||||++++++++|..||...+....+.++...                  ...+
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence            4456788999999876645568999999999999999999999887665554443210                  0011


Q ss_pred             C-----------CCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          232 P-----------NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       232 ~-----------~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      +           +.++.++.++|.+||..||++||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            1           1246789999999999999999999999999998


No 330
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00  E-value=4.8e-40  Score=330.92  Aligned_cols=257  Identities=30%  Similarity=0.428  Sum_probs=205.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCC--CcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEe----CC
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKT--GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMAS----KT   83 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~--g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~----~~   83 (472)
                      +|++.+.||+|+||.||++.+..+  +..||+|.+..... .......+.+|+.+++.+ +||||+++++....    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            699999999999999999999888  99999999864321 222345678899999998 59999999987532    25


Q ss_pred             EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           84 KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .+|+++||+. ++|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            6889999985 578887754 67999999999999999999999999999999999999999999999999998755432


Q ss_pred             cC--CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------
Q 012021          163 HQ--DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------  227 (472)
Q Consensus       163 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------  227 (472)
                      ..  ........||+.|+|||++.+....+.++||||||+++|+|++|..||...+.......+...             
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence            21  112234578999999998765433458999999999999999999999876543332221110             


Q ss_pred             ---------------CCC---CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          228 ---------------EFK---FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       228 ---------------~~~---~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                                     ...   ..+..+.++.+++.+||+.||.+|||+.+++.||||++-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence                           000   112257889999999999999999999999999999764


No 331
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=100.00  E-value=5.3e-40  Score=321.76  Aligned_cols=253  Identities=22%  Similarity=0.341  Sum_probs=210.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcC----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLK----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-   81 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-   81 (472)
                      +-.++|++.+.||+|+||.||+|.+..    ++..||+|.+....  .......+.+|+.+++.++||||+++++++.. 
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~   80 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIED   80 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            345789999999999999999999876    36889999986432  23445778899999999999999999998755 


Q ss_pred             CCEEEEEEEecCCCcccchhcc---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEee
Q 012021           82 KTKIYFVMEYVKGGELFGKVAK---------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSD  152 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~---------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~D  152 (472)
                      +...++++||+.+++|.+++..         ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence            5788999999999999988754         3588999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CC
Q 012021          153 FGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FK  230 (472)
Q Consensus       153 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~  230 (472)
                      ||+++...............++..|+|||++.+..+. .++||||||+++|++++ |+.||...+..+....+..+. +.
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  239 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYS-SASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA  239 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCC-chhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC
Confidence            9998754322111111223467789999999776654 88999999999999999 999999887777766655442 34


Q ss_pred             CCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          231 FPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       231 ~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+..+++++.+++.+||..||++|||+.++++
T Consensus       240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         240 QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            45567899999999999999999999999985


No 332
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00  E-value=1.5e-40  Score=321.84  Aligned_cols=252  Identities=30%  Similarity=0.538  Sum_probs=212.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ||.+.+.||+|+||.||++.+..++..+++|++......  .......+.+|+.+++.++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            799999999999999999999888888888877543321  112234567899999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           89 MEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |||+++++|.+.+..     ..+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999887742     46999999999999999999999999999999999999975 569999999987653321


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHH
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRL  242 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~l  242 (472)
                        .......|++.|+|||.+.+..++ .++|+||||+++|+|++|..||...........+..+. ...+..++.++.++
T Consensus       160 --~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (260)
T cd08222         160 --DLATTFTGTPYYMSPEALKHQGYD-SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSI  236 (260)
T ss_pred             --ccccCCCCCcCccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHH
Confidence              122345688999999998776665 78999999999999999999998877766666665443 34566688999999


Q ss_pred             HhcccCCCCCCcCChhhhhcCccc
Q 012021          243 LSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      |.+||..||++||++.++++||||
T Consensus       237 i~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         237 MQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999999997


No 333
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00  E-value=5.7e-40  Score=315.91  Aligned_cols=244  Identities=27%  Similarity=0.409  Sum_probs=205.7

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||+|.+.. ++.||+|.+......  .....+.+|+.+++.++||||+++++++.+....|+||||+.|+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            479999999999999877 999999998765432  34567889999999999999999999999999999999999999


Q ss_pred             cccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           96 ELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        96 ~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      +|.+++..  ..+++..+..++.+++.||.|||++|++||||||+|||++.++.++|+|||++................+
T Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (251)
T cd05041          78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI  157 (251)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence            99999854  4689999999999999999999999999999999999999999999999999875542211111112234


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNP  251 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP  251 (472)
                      +..|+|||.+.+..+ +.++|+||||+++|+|++ |..||...........+... ....|..++.++.+++.+||..+|
T Consensus       158 ~~~y~~PE~~~~~~~-~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  236 (251)
T cd05041         158 PIKWTAPEALNYGRY-TSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDP  236 (251)
T ss_pred             eeccCChHhhccCCC-CcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccCh
Confidence            567999999876655 489999999999999999 89999887766666665543 344566788999999999999999


Q ss_pred             CCcCChhhhhcC
Q 012021          252 NTRISMTKIMEN  263 (472)
Q Consensus       252 ~~Rpt~~eil~h  263 (472)
                      ++|||+.++++.
T Consensus       237 ~~Rp~~~ell~~  248 (251)
T cd05041         237 ENRPSFSEIYNE  248 (251)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863


No 334
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00  E-value=6.2e-40  Score=319.96  Aligned_cols=242  Identities=26%  Similarity=0.435  Sum_probs=200.9

Q ss_pred             eeEcccCCeEEEEEEEcCCCc--EEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCEEEEEEEec
Q 012021           16 RLLGQGTFAKVHYARNLKTGM--SVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~   92 (472)
                      +.||+|+||.||+|.+..++.  .+|+|.+....  .....+.+.+|+.+++++ +||||+++++++...+..|+||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            468999999999999988776  46888876432  223446788999999999 7999999999999999999999999


Q ss_pred             CCCcccchhccC-----------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           93 KGGELFGKVAKG-----------------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        93 ~gg~L~~~i~~~-----------------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                      ++++|.+++...                 .+++..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||+
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            999999988542                 378999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCC
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPN  233 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~  233 (472)
                      +........   ......+..|+|||++....+ +.++||||||+++|+|++ |..||.+.+....+..+... ....+.
T Consensus       159 ~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~-~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  234 (270)
T cd05047         159 SRGQEVYVK---KTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL  234 (270)
T ss_pred             ccccchhhh---ccCCCCccccCChHHHccCCC-CchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCC
Confidence            753221111   112234567999999876655 479999999999999997 99999887777777666554 234555


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .++.++.+++.+||..||.+|||+.+++..
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         235 NCDDEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             cCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            678999999999999999999999999863


No 335
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00  E-value=9.6e-40  Score=315.26  Aligned_cols=247  Identities=26%  Similarity=0.418  Sum_probs=209.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|++.+.||.|+||.||++.+. ++..+|+|.+......    ...+.+|+.+++.++||||+++++++......|+||
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence            47999999999999999999875 4778999998654432    356889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           90 EYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        90 E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||+.+++|.+++..  +.+++..++.++.|++.|+.|||++|++||||||+||+++.++.++|+|||++........ ..
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~  157 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TS  157 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc-cc
Confidence            99999999998864  5689999999999999999999999999999999999999999999999998875432211 11


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~  245 (472)
                      .....++..|+|||.+.+..+. .++||||||+++|+|++ |..||...........+..+. ...|...+.++.+++.+
T Consensus       158 ~~~~~~~~~~~aPe~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  236 (256)
T cd05112         158 STGTKFPVKWSSPEVFSFSKYS-SKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQH  236 (256)
T ss_pred             cCCCccchhhcCHhHhccCCcC-hHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence            1122356789999998766654 78999999999999998 999999888777777766543 33455578999999999


Q ss_pred             ccCCCCCCcCChhhhhcC
Q 012021          246 ILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h  263 (472)
                      ||..+|++|||+.++++.
T Consensus       237 ~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         237 CWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HcccChhhCCCHHHHHHh
Confidence            999999999999999864


No 336
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00  E-value=7.9e-40  Score=323.67  Aligned_cols=259  Identities=27%  Similarity=0.438  Sum_probs=208.9

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASK   82 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   82 (472)
                      +..+-.+.|++.+.||+|+||+||+|.+..+++.||||.+.+....  .....+.+|+.++... .||||+++++++.+.
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~   86 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITD   86 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence            3455678899999999999999999999988999999999765322  2234556677766666 499999999999999


Q ss_pred             CEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                      ...|++|||+.+ .|.+.+..  +.+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++...
T Consensus        87 ~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~  165 (296)
T cd06618          87 SDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL  165 (296)
T ss_pred             CeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence            999999999854 56555543  579999999999999999999997 59999999999999999999999999998765


Q ss_pred             hcccCCCccccccCCCcccChhhhcccC---CCCCcccchhhhHHHHHHhcCCCCCCCCcH-HHHHHHHhccC-CCCCC-
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRRG---YDGSKADIWSCGVILYVLLAGYLPFHDSNL-MEMYRKIGKAE-FKFPN-  233 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-~~~~~~i~~~~-~~~~~-  233 (472)
                      .....   .....+++.|+|||.+.+..   ..+.++||||||+++|+|++|+.||..... .+.+..+.... ...+. 
T Consensus       166 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T cd06618         166 VDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPN  242 (296)
T ss_pred             cCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCC
Confidence            33221   12345788999999986542   234789999999999999999999976433 33444443332 22332 


Q ss_pred             -CCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          234 -WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       234 -~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                       .++.++.+||.+||..||.+|||+++++.||||+.
T Consensus       243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         243 EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence             36889999999999999999999999999999985


No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00  E-value=3.5e-40  Score=323.06  Aligned_cols=249  Identities=32%  Similarity=0.490  Sum_probs=206.7

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      |++.+.||+|+||+||+|.+..+++.||||.+......  .......+|+..++.++ ||||+++++++..++..|+|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            78999999999999999999989999999998654321  11223457899999999 9999999999999999999999


Q ss_pred             ecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      |+ +++|.+.+..   ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++........   
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---  154 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---  154 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC---
Confidence            99 7788887764   2689999999999999999999999999999999999999999999999999876543221   


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------------C
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------------E  228 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------------~  228 (472)
                      .....|+..|+|||++......+.++|+||||+++++|++|+.||...+..+.+.++...                   .
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence            234568899999998865554568999999999999999999999877665544433210                   0


Q ss_pred             CC-----------CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          229 FK-----------FPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       229 ~~-----------~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..           .....++++.++|++||..+|++|||+.|++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00           011236789999999999999999999999999997


No 338
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00  E-value=8.2e-40  Score=315.92  Aligned_cols=243  Identities=25%  Similarity=0.448  Sum_probs=205.4

Q ss_pred             eeEcccCCeEEEEEEEcC-CCc--EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEec
Q 012021           16 RLLGQGTFAKVHYARNLK-TGM--SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~-~g~--~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~   92 (472)
                      +.||+|+||.||+|.+.. +++  .||+|.+......  ...+.+.+|+.+++.++||||+++++++.. ...++||||+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            468999999999999865 333  6999999776543  556789999999999999999999999988 8999999999


Q ss_pred             CCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC-Ccc
Q 012021           93 KGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD-GLL  168 (472)
Q Consensus        93 ~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~-~~~  168 (472)
                      ++++|.+++..   ..+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++......... ...
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence            99999999865   35899999999999999999999999999999999999999999999999998866432211 111


Q ss_pred             ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc--CCCCCCCCCHHHHHHHhc
Q 012021          169 HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA--EFKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~s~~l~~li~~  245 (472)
                      ....++..|+|||.+....+. .++|||||||++|+|++ |..||...+..+....+...  ....+..++..+.+++.+
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  236 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFS-HASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQ  236 (257)
T ss_pred             cCCCCCceecCHHHhcccCcC-chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHH
Confidence            234577899999998776654 78999999999999998 99999887777666665532  233455678999999999


Q ss_pred             ccCCCCCCcCChhhhhc
Q 012021          246 ILDPNPNTRISMTKIME  262 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~  262 (472)
                      ||..+|++|||+.++++
T Consensus       237 ~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         237 CWAHNPADRPTFAALRE  253 (257)
T ss_pred             HCCCCcccCCCHHHHHH
Confidence            99999999999999975


No 339
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00  E-value=2e-41  Score=340.43  Aligned_cols=241  Identities=26%  Similarity=0.455  Sum_probs=210.7

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      |-++...-++-||.|+.|.||+++.  .++.||||.++.-          -..+|.-|+.|+||||+.+.|+|...-.++
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPcyC  188 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPCYC  188 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCceeE
Confidence            3344444567799999999999987  6789999987432          235788899999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      ||||||..|.|+..++. +.++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++......  
T Consensus       189 IiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S--  266 (904)
T KOG4721|consen  189 IIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS--  266 (904)
T ss_pred             EeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhh--
Confidence            99999999999999987 579999999999999999999999999999999999999999999999999988665432  


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~s~~l~~li  243 (472)
                       ..-.++||..|||||++...+.. .|+|||||||||||||||..||.+.+...++.-+..+.  ...|..++..++-||
T Consensus       267 -TkMSFaGTVaWMAPEvIrnePcs-EKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~  344 (904)
T KOG4721|consen  267 -TKMSFAGTVAWMAPEVIRNEPCS-EKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLL  344 (904)
T ss_pred             -hhhhhhhhHhhhCHHHhhcCCcc-cccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHH
Confidence             23568999999999999877665 89999999999999999999999887776655554443  466788999999999


Q ss_pred             hcccCCCCCCcCChhhhhcC
Q 012021          244 SKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.||.-.|..||++.+|+.|
T Consensus       345 Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  345 KQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             HHHHhcCCCCCccHHHHHHH
Confidence            99999999999999999988


No 340
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00  E-value=3.2e-40  Score=328.81  Aligned_cols=247  Identities=23%  Similarity=0.422  Sum_probs=198.2

Q ss_pred             CCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccchh
Q 012021           22 TFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGKV  101 (472)
Q Consensus        22 ~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i  101 (472)
                      ++|.||.+++..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..|++|||+.+++|.+++
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l   90 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL   90 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence            445666777777999999999976532 2345678999999999999999999999999999999999999999999988


Q ss_pred             cc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC-----CCccccccC
Q 012021          102 AK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ-----DGLLHTTCG  173 (472)
Q Consensus       102 ~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~-----~~~~~~~~g  173 (472)
                      ..   ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+........     ........+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (314)
T cd08216          91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK  170 (314)
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence            64   4689999999999999999999999999999999999999999999999998764432111     111233457


Q ss_pred             CCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHH-HHHhccC----------------------
Q 012021          174 TPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMY-RKIGKAE----------------------  228 (472)
Q Consensus       174 t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~-~~i~~~~----------------------  228 (472)
                      +..|+|||++...  ++ +.++|+||+||++|+|++|..||......... .++....                      
T Consensus       171 ~~~y~aPE~~~~~~~~~-~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (314)
T cd08216         171 NLPWLSPEVLQQNLQGY-NEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSS  249 (314)
T ss_pred             cccccCHHHhcCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccc
Confidence            8899999998653  34 47899999999999999999999876543322 2221100                      


Q ss_pred             -----------CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          229 -----------FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       229 -----------~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                                 ...+..+++++.+|+.+||..||++|||++++++||||+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         250 NEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             ccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence                       001112356788999999999999999999999999998643


No 341
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00  E-value=1.6e-39  Score=315.08  Aligned_cols=249  Identities=23%  Similarity=0.392  Sum_probs=208.5

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .+..++|++.+.||+|+||.||++.+. .+..+|+|.+....    ...+.+.+|+.+++.++|+||+++++++.. ...
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   75 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI   75 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence            467889999999999999999999864 56679999886543    234678899999999999999999999887 778


Q ss_pred             EEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      |++|||+++++|.+++..   ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence            999999999999999864   35788999999999999999999999999999999999999999999999998755332


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~  240 (472)
                      .. .......++..|+|||++....+ +.++|+|||||++|++++ |..||...+.......+.... ...+...+.++.
T Consensus       156 ~~-~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (260)
T cd05073         156 EY-TAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY  233 (260)
T ss_pred             Cc-ccccCCcccccccCHhHhccCCc-CccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHH
Confidence            11 11122345677999999876554 478999999999999998 999999877766666655442 344566889999


Q ss_pred             HHHhcccCCCCCCcCChhhhhc
Q 012021          241 RLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +++.+||+++|++||++.++++
T Consensus       234 ~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         234 NIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHH
Confidence            9999999999999999998864


No 342
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00  E-value=7.8e-40  Score=319.48  Aligned_cols=251  Identities=23%  Similarity=0.375  Sum_probs=211.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      .++|++++.||+|+||+||+|+...     +.+.||+|.+.....  ....+.+.+|+.+++.++||||+++++++.+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   81 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE   81 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence            4689999999999999999999754     346799998865432  234577899999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc-C---------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeec
Q 012021           84 KIYFVMEYVKGGELFGKVAK-G---------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDF  153 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~-~---------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DF  153 (472)
                      ..|+||||+++++|.+++.. +         .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence            99999999999999998864 3         5899999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccCC--C
Q 012021          154 GLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAEF--K  230 (472)
Q Consensus       154 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~~--~  230 (472)
                      |++....... ........+++.|+|||.+.+..+ +.++||||||+++|+|++ |..||........+..+.....  .
T Consensus       162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~  239 (275)
T cd05046         162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDF-STKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP  239 (275)
T ss_pred             ccccccCccc-ccccCCceeEEeecChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC
Confidence            9876432211 111233456778999999876655 478999999999999998 8999988777666666664443  3


Q ss_pred             CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          231 FPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       231 ~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+..++..+.+++.+||..+|.+|||+.+++..
T Consensus       240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            455688999999999999999999999999864


No 343
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=100.00  E-value=1.8e-40  Score=321.59  Aligned_cols=238  Identities=25%  Similarity=0.339  Sum_probs=198.4

Q ss_pred             eeEcccCCeEEEEEEEcCCCcE-------EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           16 RLLGQGTFAKVHYARNLKTGMS-------VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~-------vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      +.||+|+||.||+|.+..++..       ||+|.+....   ....+.+.+|+.+++.++||||+++++++..+...++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            4699999999999998765543       8888876443   23456788899999999999999999999999999999


Q ss_pred             EEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC--------EEEeeccchhh
Q 012021           89 MEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN--------LKVSDFGLSAL  158 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~--------vkl~DFGla~~  158 (472)
                      |||+.+|+|..++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.        ++++|||++..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            999999999999865  35899999999999999999999999999999999999987765        69999998764


Q ss_pred             hhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcC-CCCCCCCcHHHHHHHHhccCCCCCCCCCH
Q 012021          159 AESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAG-YLPFHDSNLMEMYRKIGKAEFKFPNWFAP  237 (472)
Q Consensus       159 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~  237 (472)
                      ...      .....+++.|+|||++.+....+.++||||||+++|+|++| ..||...+..... .+......+|...+.
T Consensus       158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (258)
T cd05078         158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLPAPKWT  230 (258)
T ss_pred             cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCCCCCcH
Confidence            432      13356889999999997655456889999999999999998 5666665544432 233445667777789


Q ss_pred             HHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          238 EVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       238 ~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ++.++|.+||+.||++|||+++|++.
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHh
Confidence            99999999999999999999999864


No 344
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00  E-value=1.2e-39  Score=313.87  Aligned_cols=247  Identities=28%  Similarity=0.467  Sum_probs=210.6

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCC----cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTG----MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      +++.+.||.|+||.||++.+..++    ..||+|.+......  ...+.+..|+.+++.++||||+++++++.+.+..|+
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   78 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI   78 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence            467899999999999999998766    89999999655321  245788999999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccC-C--CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           88 VMEYVKGGELFGKVAKG-K--LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~-~--l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      +|||+++++|.+++... .  +++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus        79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence            99999999999998653 2  99999999999999999999999999999999999999999999999999876543311


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHH
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRL  242 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~l  242 (472)
                      ... ....+++.|+|||.+....+ +.++|+||||+++++|++ |..||...+.......+.... ...+..++.++.++
T Consensus       159 ~~~-~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (258)
T smart00219      159 YKK-KGGKLPIRWMAPESLKDGKF-TSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKL  236 (258)
T ss_pred             ccc-ccCCCcccccChHHhccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHH
Confidence            110 11236789999999865544 589999999999999998 899998887777777766544 34566689999999


Q ss_pred             HhcccCCCCCCcCChhhhhc
Q 012021          243 LSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~  262 (472)
                      +.+||..||++|||+.++++
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      237 MLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHCcCChhhCcCHHHHHh
Confidence            99999999999999999975


No 345
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=4.9e-41  Score=343.29  Aligned_cols=254  Identities=25%  Similarity=0.532  Sum_probs=221.0

Q ss_pred             cCCeE-EEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE--
Q 012021            9 MQRYE-LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL-KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK--   84 (472)
Q Consensus         9 ~~~y~-i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--   84 (472)
                      .+||- ....||+|+|-+||+|.|..+|-.||.-.+....+. .....+++..|+.+|+.|+||||+++|++|.+..+  
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence            45553 457899999999999999999999998766544433 34557899999999999999999999999987765  


Q ss_pred             EEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCcEEEcC-CCCEEEeeccchhhhh
Q 012021           85 IYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSR--GVCHRDLKPENLLLDE-HGNLKVSDFGLSALAE  160 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~--giiHrDlKp~NILld~-~g~vkl~DFGla~~~~  160 (472)
                      +.+|+|.+..|+|+.|+++ ++++...++.|++||+.||.|||++  -|+|||||-+||+|+. .|.|||+|+|||++..
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence            8899999999999999987 7899999999999999999999998  5999999999999975 4789999999999876


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-CcHHHHHHHHhccCCC--CCCCCCH
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-SNLMEMYRKIGKAEFK--FPNWFAP  237 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-~~~~~~~~~i~~~~~~--~~~~~s~  237 (472)
                      ....    ....|||.|||||.+. ..|+ ..+||||||+.++||+|+..||.. .+...+|+++..+..+  +..--.|
T Consensus       198 ~s~a----ksvIGTPEFMAPEmYE-E~Yn-E~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dP  271 (632)
T KOG0584|consen  198 KSHA----KSVIGTPEFMAPEMYE-ENYN-ELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDP  271 (632)
T ss_pred             cccc----ceeccCccccChHHHh-hhcc-hhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCH
Confidence            5443    4578999999999986 5676 899999999999999999999975 6778999999877543  2333468


Q ss_pred             HHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          238 EVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       238 ~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ++++||.+||.. .+.|+|+.|+|.||||...
T Consensus       272 evr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  272 EVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence            999999999999 9999999999999999874


No 346
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00  E-value=2e-39  Score=311.97  Aligned_cols=243  Identities=26%  Similarity=0.456  Sum_probs=203.5

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      +.||+|+||.||+|.. .++..+|+|.+.....  ......+.+|+.+++.++||||+++++++...+..|+||||++++
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            4789999999999986 4788999999865432  233456889999999999999999999999999999999999999


Q ss_pred             cccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccC
Q 012021           96 ELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCG  173 (472)
Q Consensus        96 ~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~g  173 (472)
                      +|.+++..  ..+++..+..++.|++.||.|+|++|++||||||+||+++.++.++|+|||++........ .......+
T Consensus        78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~  156 (250)
T cd05085          78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQI  156 (250)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCC
Confidence            99998864  4689999999999999999999999999999999999999999999999999864332111 11112244


Q ss_pred             CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCC
Q 012021          174 TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNP  251 (472)
Q Consensus       174 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP  251 (472)
                      ++.|+|||++....+ +.++||||||+++|++++ |..||...........+... ....+..++..+.+++.+||..+|
T Consensus       157 ~~~y~aPE~~~~~~~-~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  235 (250)
T cd05085         157 PIKWTAPEALNYGRY-SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKP  235 (250)
T ss_pred             cccccCHHHhccCCC-CchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            677999999876554 478999999999999998 99999887776666666544 335566789999999999999999


Q ss_pred             CCcCChhhhhcC
Q 012021          252 NTRISMTKIMEN  263 (472)
Q Consensus       252 ~~Rpt~~eil~h  263 (472)
                      ++|||+.++++.
T Consensus       236 ~~Rp~~~~l~~~  247 (250)
T cd05085         236 ENRPKFSELQKE  247 (250)
T ss_pred             ccCCCHHHHHHH
Confidence            999999999753


No 347
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00  E-value=5.8e-41  Score=362.14  Aligned_cols=255  Identities=31%  Similarity=0.531  Sum_probs=209.6

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe------
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS------   81 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~------   81 (472)
                      ....|+.++.||+||||.||+++++-+|..||||.|....  .......+.+|+..|.+|+|||||++|..+.+      
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            4556889999999999999999999999999999997765  33566789999999999999999999842100      


Q ss_pred             --------------------------------------------------------------------------------
Q 012021           82 --------------------------------------------------------------------------------   81 (472)
Q Consensus        82 --------------------------------------------------------------------------------   81 (472)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------C--------CEEEEEEEecCCCcccchhccCCCC--HHHHHHHHHHHHHHHHHHH
Q 012021           82 -------------------------K--------TKIYFVMEYVKGGELFGKVAKGKLK--EDAARKYFQQLISAVDYCH  126 (472)
Q Consensus        82 -------------------------~--------~~~~lV~E~~~gg~L~~~i~~~~l~--e~~~~~i~~ql~~aL~yLH  126 (472)
                                               +        ..+||-||||+...|.+++..+.+.  ...+|++|++|++||.|+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence                                     0        1278999999999999999887764  8899999999999999999


Q ss_pred             hCCceecCCCCCcEEEcCCCCEEEeeccchhhhh----c------------ccCCCccccccCCCcccChhhhcccC--C
Q 012021          127 SRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE----S------------KHQDGLLHTTCGTPAYVAPEVINRRG--Y  188 (472)
Q Consensus       127 ~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~~~~~--~  188 (472)
                      ++|||||||||.||+||+++.|||+|||+|+...    .            ...++..+..+||..|+|||++.+..  .
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            9999999999999999999999999999998721    0            11122456678999999999998766  2


Q ss_pred             CCCcccchhhhHHHHHHhcCCCCCCCC-cHHHHHHHHhccCCCCCCC----CCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          189 DGSKADIWSCGVILYVLLAGYLPFHDS-NLMEMYRKIGKAEFKFPNW----FAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       189 ~~~~~DiwSlGvil~~lltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~----~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +..|+|+|||||||+||+.   ||... ........+.++.++.|..    --+.-..+|++||+.||++|||+.|+|++
T Consensus       795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            3489999999999999994   56543 3334555666666666532    23566789999999999999999999999


Q ss_pred             cccc
Q 012021          264 SWFR  267 (472)
Q Consensus       264 ~~f~  267 (472)
                      .||.
T Consensus       872 ~llp  875 (1351)
T KOG1035|consen  872 ELLP  875 (1351)
T ss_pred             cCCC
Confidence            9985


No 348
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00  E-value=1.9e-39  Score=316.16  Aligned_cols=251  Identities=26%  Similarity=0.419  Sum_probs=208.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ...+|.+.+.||+|+||.||+|.+...   ...||||.......  ....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~   80 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP   80 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence            456799999999999999999987644   35799998865432  2345678899999999999999999999875 45


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .|+||||+++++|.+++..  ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            7899999999999999865  35899999999999999999999999999999999999999999999999998754332


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ... ......+++.|+|||.+....+. .++||||||+++|++++ |..||......+....+..+ ....|..+++++.
T Consensus       161 ~~~-~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (270)
T cd05056         161 SYY-KASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY  238 (270)
T ss_pred             cce-ecCCCCccccccChhhhccCCCC-chhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence            111 01122345689999998766654 88999999999999986 99999888776666666554 3456677899999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ++|.+||..+|.+|||+.++++.
T Consensus       239 ~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         239 SLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999864


No 349
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00  E-value=4.1e-40  Score=315.55  Aligned_cols=228  Identities=26%  Similarity=0.455  Sum_probs=193.3

Q ss_pred             cCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccch
Q 012021           21 GTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGK  100 (472)
Q Consensus        21 G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~  100 (472)
                      |.||+||+|++..+++.||+|.+.+..        ...+|...+....||||+++++++.+....|+||||++||+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            899999999999999999999997653        123455555566799999999999999999999999999999998


Q ss_pred             hcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccC
Q 012021          101 VAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVA  179 (472)
Q Consensus       101 i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~a  179 (472)
                      +.+ +.+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|||++......     .....++..|+|
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~a  150 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCA  150 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccC
Confidence            865 57999999999999999999999999999999999999999999999999987654332     223456788999


Q ss_pred             hhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCCh--
Q 012021          180 PEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRISM--  257 (472)
Q Consensus       180 PE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~--  257 (472)
                      ||.+....+ +.++|+||+|+++|+|++|+.||.......    .......+|.++++.++++|.+||+.||++|||+  
T Consensus       151 PE~~~~~~~-~~~~DvwslG~il~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~  225 (237)
T cd05576         151 PEVGGISEE-TEACDWWSLGAILFELLTGKTLVECHPSGI----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV  225 (237)
T ss_pred             CcccCCCCC-CchhhHHHHHHHHHHHHHCcchhhcCchhc----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence            999876655 478999999999999999999876432211    0112345788899999999999999999999986  


Q ss_pred             ---hhhhcCccc
Q 012021          258 ---TKIMENSWF  266 (472)
Q Consensus       258 ---~eil~h~~f  266 (472)
                         +++++||||
T Consensus       226 ~~~~~~~~h~~~  237 (237)
T cd05576         226 AGVEDIKSHPFF  237 (237)
T ss_pred             cchHHHHcCCCC
Confidence               999999997


No 350
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00  E-value=1.5e-39  Score=316.33  Aligned_cols=238  Identities=25%  Similarity=0.340  Sum_probs=194.6

Q ss_pred             eeEcccCCeEEEEEEEcC------------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021           16 RLLGQGTFAKVHYARNLK------------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~------------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      +.||+|+||.||+|....            ....||+|++....   ......+.+|+.+++.++||||+++++++..+.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            468999999999998532            22368899876543   234457888999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC-------EEEeecc
Q 012021           84 KIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN-------LKVSDFG  154 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~-------vkl~DFG  154 (472)
                      ..++||||+.+++|..++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.       ++++|||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            99999999999999887754  56999999999999999999999999999999999999987764       8999999


Q ss_pred             chhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHh-cCCCCCCCCcHHHHHHHHhccCCCCCC
Q 012021          155 LSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLL-AGYLPFHDSNLMEMYRKIGKAEFKFPN  233 (472)
Q Consensus       155 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~ll-tG~~Pf~~~~~~~~~~~i~~~~~~~~~  233 (472)
                      ++......      ....|+..|+|||.+......+.++|||||||++|+|+ +|..||......+.. .+.........
T Consensus       158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~~  230 (262)
T cd05077         158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLVT  230 (262)
T ss_pred             CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCCC
Confidence            87654321      23467889999999865454568999999999999997 689998776554432 23333344444


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..++++.+||.+||+.||.+||++.+|+++
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            457889999999999999999999999875


No 351
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00  E-value=1.7e-39  Score=316.35  Aligned_cols=244  Identities=19%  Similarity=0.292  Sum_probs=192.1

Q ss_pred             eeEcccCCeEEEEEEEcC--CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQGTFAKVHYARNLK--TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      +.||+|+||+||+|....  ....+|+|.+....  .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence            469999999999996432  44578888875433  12334567889999999999999999999999999999999999


Q ss_pred             CCcccchhccC------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           94 GGELFGKVAKG------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        94 gg~L~~~i~~~------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +|+|.+++...      ..++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            99999988642      246788899999999999999999999999999999999999999999999864322111111


Q ss_pred             cccccCCCcccChhhhccc------CCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHH-hccCCC-----CCCC
Q 012021          168 LHTTCGTPAYVAPEVINRR------GYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKI-GKAEFK-----FPNW  234 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i-~~~~~~-----~~~~  234 (472)
                      .....+++.|+|||++...      ...+.++|||||||++|+|++ |..||......+....+ ......     .+..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLK  238 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccccc
Confidence            1233467789999997532      223578999999999999999 88999877665544443 333222     2335


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      +++.+.+++..|+ .||++|||+++|++
T Consensus       239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         239 YSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             CCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            7888999999998 59999999999976


No 352
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00  E-value=1.6e-39  Score=316.09  Aligned_cols=244  Identities=23%  Similarity=0.385  Sum_probs=203.2

Q ss_pred             eeEcccCCeEEEEEEEcCCC------cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           16 RLLGQGTFAKVHYARNLKTG------MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +.||+|+||.||+|.+....      ..+|+|.+.+...  ......+.+|+.+++.++||||+++++++......|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence            46999999999999986544      6899999865421  133467889999999999999999999999999999999


Q ss_pred             EecCCCcccchhcc--------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-----CEEEeeccch
Q 012021           90 EYVKGGELFGKVAK--------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-----NLKVSDFGLS  156 (472)
Q Consensus        90 E~~~gg~L~~~i~~--------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-----~vkl~DFGla  156 (472)
                      ||+++++|.+++..        ..+++..+..++.||+.||.|||++|++|+||||+||+++.++     .++|+|||++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            99999999988853        2478899999999999999999999999999999999999887     8999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCC
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNW  234 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~  234 (472)
                      ................++..|+|||.+.+..+ +.++|||||||++|+|++ |..||...+..+....+... .+..+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF-TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPEN  237 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCc-ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCccc
Confidence            75533221111223356788999999876655 589999999999999998 99999887776666665443 3455667


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++..+.++|.+||..+|.+||+++++++
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            8899999999999999999999999975


No 353
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00  E-value=2.5e-39  Score=321.46  Aligned_cols=251  Identities=23%  Similarity=0.354  Sum_probs=206.3

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCc----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGM----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      .++|++.+.||+|+||.||+|.+..+|.    .||+|.+.....  ......+.+|+.+++.++||||+++++++... .
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~   82 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T   82 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence            4579999999999999999999988876    468888765432  22334678999999999999999999998654 4


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .++++||+++|+|.+++..  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~  162 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD  162 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence            6799999999999998865  36899999999999999999999999999999999999999999999999999865432


Q ss_pred             cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      ..........++..|+|||.+.+..+. .++||||||+++|+|++ |..||.+.........+... .+..+...+..+.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd05110         163 EKEYNADGGKMPIKWMALECIHYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVY  241 (303)
T ss_pred             ccccccCCCccccccCCHHHhccCCCC-hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
Confidence            221112234467789999998766654 88999999999999997 99999876655544444333 2344556788999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +++.+||..+|++||+++++++.
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999875


No 354
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00  E-value=2.7e-39  Score=317.80  Aligned_cols=250  Identities=27%  Similarity=0.424  Sum_probs=201.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEE----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--CE
Q 012021           11 RYELGRLLGQGTFAKVHYARN----LKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK--TK   84 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~----~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~   84 (472)
                      -|++++.||+|+||.||+|..    ..++..||+|.+....  .......+.+|+.+++.++||||+++++++...  ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            368999999999999999974    4578899999986543  223456789999999999999999999998775  67


Q ss_pred             EEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .|+||||++|++|.+++..  ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  162 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence            8999999999999999865  35899999999999999999999999999999999999999999999999998865432


Q ss_pred             cCC-CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc---------------HHHHHHHHhc
Q 012021          163 HQD-GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN---------------LMEMYRKIGK  226 (472)
Q Consensus       163 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~---------------~~~~~~~i~~  226 (472)
                      ... .......|+..|+|||++.+..+. .++||||||+++|+|+++..|+....               .......+..
T Consensus       163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05079         163 KEYYTVKDDLDSPVFWYAPECLIQSKFY-IASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE  241 (284)
T ss_pred             ccceeecCCCCCCccccCHHHhccCCCC-ccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence            211 112234567789999998776554 78999999999999999877653211               0111111111


Q ss_pred             -cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          227 -AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       227 -~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                       .....+..+++++.+||.+||+.||.+|||+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         242 GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence             1233455688999999999999999999999999864


No 355
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00  E-value=5.4e-41  Score=325.23  Aligned_cols=254  Identities=31%  Similarity=0.490  Sum_probs=210.0

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC--C----CeeeEEE
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH--P----NVVELYE   77 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--p----nIv~l~~   77 (472)
                      .|.++.+||.++.+||+|+||+|-.+.|..++..||||+++.-.    ...+..+-|+.+|+++.+  |    -+|.+.+
T Consensus        83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence            47788999999999999999999999999999999999985432    334556779999999842  3    3788999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC----------
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE----------  144 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~----------  144 (472)
                      +|+-.+++++|+|.+ |.++++.+..+   +++...++.+++||+.+++|||+.+++|.||||||||+-+          
T Consensus       159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC
Confidence            999999999999998 77999999874   6899999999999999999999999999999999999832          


Q ss_pred             ----------CCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC
Q 012021          145 ----------HGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD  214 (472)
Q Consensus       145 ----------~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~  214 (472)
                                +..|+|+|||.|+.....     -++.+.|..|.|||++.+-+++ .++||||+||||+||.+|...|..
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS-~pCDvWSiGCIL~ElytG~~LFqt  311 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWS-QPCDVWSIGCILVELYTGETLFQT  311 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcC-CccCceeeeeEEEEeeccceeccc
Confidence                      335899999988864332     2566789999999999999997 899999999999999999999987


Q ss_pred             CcHHH---HHHHHhc------------------cCCCCCCCC-------------------------CHHHHHHHhcccC
Q 012021          215 SNLME---MYRKIGK------------------AEFKFPNWF-------------------------APEVRRLLSKILD  248 (472)
Q Consensus       215 ~~~~~---~~~~i~~------------------~~~~~~~~~-------------------------s~~l~~li~~~L~  248 (472)
                      .+..+   +.++|..                  +...+|...                         ..++.+||++||.
T Consensus       312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~  391 (415)
T KOG0671|consen  312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE  391 (415)
T ss_pred             CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence            55433   3333321                  111111110                         1257899999999


Q ss_pred             CCCCCcCChhhhhcCccccc
Q 012021          249 PNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       249 ~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .||.+|+|+.|+|.||||..
T Consensus       392 fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  392 FDPARRITLREALSHPFFAR  411 (415)
T ss_pred             cCccccccHHHHhcCHHhhc
Confidence            99999999999999999975


No 356
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00  E-value=1.7e-39  Score=318.13  Aligned_cols=237  Identities=26%  Similarity=0.343  Sum_probs=193.9

Q ss_pred             eEcccCCeEEEEEEEcCC------------------------CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe
Q 012021           17 LLGQGTFAKVHYARNLKT------------------------GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV   72 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~------------------------g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI   72 (472)
                      +||+|+||.||+|....+                        ...||+|++....   ......+.+|+.+++.++||||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence            699999999999975322                        2358899886543   2334567889999999999999


Q ss_pred             eeEEEEEEeCCEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC----
Q 012021           73 VELYEVMASKTKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG----  146 (472)
Q Consensus        73 v~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g----  146 (472)
                      +++++++......|+||||+++|+|..++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++    
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999888854  5799999999999999999999999999999999999998654    


Q ss_pred             ---CEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHH-hcCCCCCCCCcHHHHHH
Q 012021          147 ---NLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVL-LAGYLPFHDSNLMEMYR  222 (472)
Q Consensus       147 ---~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~l-ltG~~Pf~~~~~~~~~~  222 (472)
                         .+|++|||++......      ....+++.|+|||.+.+....+.++||||||+++|+| ++|..||..........
T Consensus       159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  232 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER  232 (274)
T ss_pred             ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence               3899999987543221      2345788999999886644446899999999999998 47999998765544332


Q ss_pred             HHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          223 KIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       223 ~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                       ........|...++++.++|.+||+.+|++|||+.+|+++
T Consensus       233 -~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         233 -FYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             -HHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence             2223344555567899999999999999999999999875


No 357
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=7.1e-40  Score=335.27  Aligned_cols=252  Identities=28%  Similarity=0.449  Sum_probs=214.4

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCc---E-EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGM---S-VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~---~-vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      +..++-.+.++||+|+||+||+|..+..+.   . ||+|....+..........+.+|+++|+.++|||||++||+....
T Consensus       154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~  233 (474)
T KOG0194|consen  154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE  233 (474)
T ss_pred             EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence            444556677999999999999999876433   3 899998764434456678899999999999999999999999999


Q ss_pred             CEEEEEEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                      .-+|+|||+|.||+|.+++.+.  .++..+..+++.+.+.||+|||+++++||||-..|+|++.++.+||+||||++...
T Consensus       234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            9999999999999999999874  49999999999999999999999999999999999999999999999999987543


Q ss_pred             cccCCCcccccc-CCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccCC--CCCCCCC
Q 012021          161 SKHQDGLLHTTC-GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAEF--KFPNWFA  236 (472)
Q Consensus       161 ~~~~~~~~~~~~-gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~s  236 (472)
                      ....   ....+ -...|+|||.+...-| +.++||||+||++||+++ |..||.+....+...+|....+  ..|...+
T Consensus       314 ~~~~---~~~~~klPirWLAPEtl~~~~~-s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p  389 (474)
T KOG0194|consen  314 QYVM---KKFLKKLPIRWLAPETLNTGIF-SFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTP  389 (474)
T ss_pred             ceee---ccccccCcceecChhhhccCcc-ccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCH
Confidence            1111   11112 3457999999987755 589999999999999999 8899999999999999966544  4556678


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .++..++.+|+..||+.|||+.++.+
T Consensus       390 ~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  390 KELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHHHHhccCChhhccCHHHHHH
Confidence            88999999999999999999999965


No 358
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00  E-value=5.1e-39  Score=315.45  Aligned_cols=251  Identities=23%  Similarity=0.396  Sum_probs=200.1

Q ss_pred             cCCeEEEeeEcccCCeEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--C
Q 012021            9 MQRYELGRLLGQGTFAKVHYAR----NLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--K   82 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~   82 (472)
                      ..+|++.+.||+|+||.||.+.    +..++..||+|.+....   ....+.+.+|+.+++.++||||+++++++..  .
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   79 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence            3589999999999999999997    44578999999986543   2345678899999999999999999998743  4


Q ss_pred             CEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                      ..+|+||||+++++|.+++..  +.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++....
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            578999999999999999864  468999999999999999999999999999999999999999999999999988654


Q ss_pred             cccCCCcc-ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH----------------HHHH
Q 012021          161 SKHQDGLL-HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME----------------MYRK  223 (472)
Q Consensus       161 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~----------------~~~~  223 (472)
                      ........ ....++..|+|||.+.+..+ +.++||||||+++|+|++|..|+.......                +...
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05081         160 QDKEYYKVREPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL  238 (284)
T ss_pred             CCCcceeecCCCCCceEeeCHHHhccCCc-ChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence            32211101 11223456999999876655 479999999999999999987764432110                1111


Q ss_pred             Hhc-cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          224 IGK-AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       224 i~~-~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +.. .....+..++.++.++|.+||..+|++|||+.+|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05081         239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ  279 (284)
T ss_pred             HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            111 1233455688999999999999999999999999763


No 359
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00  E-value=3.3e-39  Score=311.61  Aligned_cols=241  Identities=28%  Similarity=0.491  Sum_probs=204.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++.+.||+|+||.||.+..  +++.||+|.+....     ..+.+.+|+.+++.++||||+++++++..+ ..|++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEE
Confidence            46899999999999999999864  78899999986432     235688999999999999999999998655 47999


Q ss_pred             EEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           89 MEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |||+.+++|.+++..   ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......   
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---  153 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---  153 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence            999999999999864   25899999999999999999999999999999999999999999999999988754321   


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li  243 (472)
                        ......+..|+|||.+.+..+ +.++|+||||+++|+|++ |..||...+..+....+..+. ...+..+++++.+++
T Consensus       154 --~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (254)
T cd05083         154 --VDNSKLPVKWTAPEALKHKKF-SSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLM  230 (254)
T ss_pred             --CCCCCCCceecCHHHhccCCc-CchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHH
Confidence              122334568999999876655 478999999999999997 999999887777666665542 334556889999999


Q ss_pred             hcccCCCCCCcCChhhhhcC
Q 012021          244 SKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+||..+|..||+++++++.
T Consensus       231 ~~~l~~~p~~Rp~~~~l~~~  250 (254)
T cd05083         231 TSCWETEPKKRPSFHKLREK  250 (254)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999763


No 360
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00  E-value=4.7e-39  Score=313.38  Aligned_cols=244  Identities=18%  Similarity=0.242  Sum_probs=192.9

Q ss_pred             eeEcccCCeEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQGTFAKVHYARNL--KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      +.||+|+||.||+|...  .++..+|+|.+......  .....+.+|+.+++.++||||+++++++.+....|+||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence            46899999999999764  35678999988655321  233568889999999999999999999999999999999999


Q ss_pred             CCcccchhcc------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           94 GGELFGKVAK------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        94 gg~L~~~i~~------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      +|+|.+++..      ...++..++.++.|++.|+.|||++|++||||||+||+++.++.++|+|||++...........
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            9999998853      2356778889999999999999999999999999999999999999999999865432211111


Q ss_pred             cccccCCCcccChhhhcccC------CCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHH-HhccCCCC-----CCC
Q 012021          168 LHTTCGTPAYVAPEVINRRG------YDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRK-IGKAEFKF-----PNW  234 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~------~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~-i~~~~~~~-----~~~  234 (472)
                      .....|++.|+|||++.+..      ..+.++||||||+++|+|++ |..||......+.... +.......     ...
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05087         159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLP  238 (269)
T ss_pred             CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCC
Confidence            22346788999999985432      12578999999999999996 9999987665544332 22222222     223


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .++.+.+++.+|+ .+|++|||+++|+.
T Consensus       239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         239 LSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            6788999999998 68999999999974


No 361
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00  E-value=5.3e-41  Score=317.01  Aligned_cols=262  Identities=29%  Similarity=0.435  Sum_probs=210.9

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCc----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGM----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS-KT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~   83 (472)
                      ...|++...||+|+||.||+|....++.    .+|||.+..++- ..+.....-||+.+++.++|||++.|..+|-+ +.
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            3479999999999999999997665543    689999976643 22444567799999999999999999999866 88


Q ss_pred             EEEEEEEecCCCcccchhcc------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC----CCEEEeec
Q 012021           84 KIYFVMEYVKGGELFGKVAK------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH----GNLKVSDF  153 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~----g~vkl~DF  153 (472)
                      .+++++||++. +|...|+-      ..++...++.+++||++|+.|||++-|+||||||.|||+..+    |.+||+||
T Consensus       102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999999965 78777742      358999999999999999999999999999999999999877    89999999


Q ss_pred             cchhhhhcccCCC-ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH---------HHHHHH
Q 012021          154 GLSALAESKHQDG-LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL---------MEMYRK  223 (472)
Q Consensus       154 Gla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~---------~~~~~~  223 (472)
                      |+++++...-..- .....+-|.+|+|||.+.+...++.+.||||.|||+.||+|-++.|.+...         .+...+
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r  260 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR  260 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence            9999887653321 234566799999999999988888999999999999999999888865321         122222


Q ss_pred             Hhcc--C---------CCCCCC--------------------------CCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          224 IGKA--E---------FKFPNW--------------------------FAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       224 i~~~--~---------~~~~~~--------------------------~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      |...  -         ...|.+                          -++...+|+.+||+.||.+|+|+++.|+|+||
T Consensus       261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF  340 (438)
T KOG0666|consen  261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF  340 (438)
T ss_pred             HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence            2110  0         011111                          14568899999999999999999999999999


Q ss_pred             ccCCCC
Q 012021          267 RKGLVK  272 (472)
Q Consensus       267 ~~~~~~  272 (472)
                      .+...+
T Consensus       341 ~~d~lp  346 (438)
T KOG0666|consen  341 TEDPLP  346 (438)
T ss_pred             ccCCCC
Confidence            986543


No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00  E-value=5.2e-39  Score=311.24  Aligned_cols=245  Identities=23%  Similarity=0.390  Sum_probs=199.0

Q ss_pred             eeEcccCCeEEEEEEEcC---CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE-eCCEEEEEEEe
Q 012021           16 RLLGQGTFAKVHYARNLK---TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA-SKTKIYFVMEY   91 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~lV~E~   91 (472)
                      +.||+|+||.||+|.+..   .+..||+|.+....  .....+.+.+|+.+++.++||||+++++++. .++..|++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            468999999999998754   34579999975432  2234567889999999999999999999764 56678999999


Q ss_pred             cCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC--Cc
Q 012021           92 VKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD--GL  167 (472)
Q Consensus        92 ~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~--~~  167 (472)
                      +.+++|.+++..  ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.........  ..
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  158 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN  158 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence            999999999865  45778888999999999999999999999999999999999999999999998754321110  01


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-CCCCCCCCHHHHHHHhc
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-FKFPNWFAPEVRRLLSK  245 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~s~~l~~li~~  245 (472)
                      .....+++.|+|||.+....+. .++|||||||++|+|++ |.+||...+..+....+.... ...+..+++.+.+++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  237 (262)
T cd05058         159 HTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLS  237 (262)
T ss_pred             cccCcCCccccChhHhccCccc-hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            1233467789999998776654 79999999999999999 567787777666666555443 34455678999999999


Q ss_pred             ccCCCCCCcCChhhhhcC
Q 012021          246 ILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       246 ~L~~dP~~Rpt~~eil~h  263 (472)
                      ||.++|++||++.+++..
T Consensus       238 cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         238 CWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HcCCChhhCCCHHHHHHH
Confidence            999999999999999864


No 363
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00  E-value=6.3e-39  Score=317.50  Aligned_cols=255  Identities=14%  Similarity=0.192  Sum_probs=192.7

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhh--------HHHHHHHHHHHHhcCCCCee
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGM--------IDQIKREISVMRLVRHPNVV   73 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~--------~~~~~~Ei~il~~l~hpnIv   73 (472)
                      .++..++|++.+.||+|+||+||+|.+..+   +..+|+|+...........        ......+...++.+.|+||+
T Consensus         7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~   86 (294)
T PHA02882          7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP   86 (294)
T ss_pred             eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence            346678999999999999999999998877   6778888754332110000        01112333445667899999


Q ss_pred             eEEEEEEeCC----EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCE
Q 012021           74 ELYEVMASKT----KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        74 ~l~~~~~~~~----~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~v  148 (472)
                      ++++++....    ..|+++|++.. ++.+.+.. ...++..++.++.|++.||.|||++||+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~  165 (294)
T PHA02882         87 KYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG  165 (294)
T ss_pred             cEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence            9999865443    45788887743 45555544 357889999999999999999999999999999999999999999


Q ss_pred             EEeeccchhhhhcccC-----CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH-H----
Q 012021          149 KVSDFGLSALAESKHQ-----DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL-M----  218 (472)
Q Consensus       149 kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-~----  218 (472)
                      +|+|||+|+.......     ........||+.|+|||++.+..+. .++|||||||++|+|++|.+||...+. .    
T Consensus       166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~-~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~  244 (294)
T PHA02882        166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVT-RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH  244 (294)
T ss_pred             EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCC-cHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence            9999999876532211     1112334799999999999877764 899999999999999999999987632 1    


Q ss_pred             ----HHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          219 ----EMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       219 ----~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                          +...++......++ ..++++.+++..|+..+|++||++++|++
T Consensus       245 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        245 AAKCDFIKRLHEGKIKIK-NANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HhHHHHHHHhhhhhhccC-CCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                12233333333333 46889999999999999999999999975


No 364
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00  E-value=4.2e-39  Score=313.79  Aligned_cols=250  Identities=25%  Similarity=0.412  Sum_probs=205.4

Q ss_pred             eEEEeeEcccCCeEEEEEEEcC---CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-----
Q 012021           12 YELGRLLGQGTFAKVHYARNLK---TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-----   83 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----   83 (472)
                      |++.+.||+|+||.||+|.+..   ++..||||++...... ....+.+.+|+.+++.++||||+++++++....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence            6788999999999999998653   5789999999654422 234567889999999999999999999885432     


Q ss_pred             -EEEEEEEecCCCcccchhcc-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           84 -KIYFVMEYVKGGELFGKVAK-------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        84 -~~~lV~E~~~gg~L~~~i~~-------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                       ..++++||+.+|+|.+++..       ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence             34789999999999776532       2478999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCC
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPN  233 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~  233 (472)
                      +................+++.|++||.+....++ .++|||||||++|+|++ |..||...+..+.+..+... ....+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  238 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYT-THSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPP  238 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccc-hhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCC
Confidence            8865332211112233456789999998776654 78999999999999999 99999888777777666544 344556


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      ..++.+.+++.+||..+|+.|||+.+++..
T Consensus       239 ~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         239 DCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            788999999999999999999999999864


No 365
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00  E-value=8e-39  Score=311.34  Aligned_cols=249  Identities=28%  Similarity=0.561  Sum_probs=209.4

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcC-CCcEEEEEEeecccc-------cchhhHHHHHHHHHHHHh-cCCCCeeeEEEEEEe
Q 012021           11 RYELGRLLGQGTFAKVHYARNLK-TGMSVAIKIIDKEKV-------LKVGMIDQIKREISVMRL-VRHPNVVELYEVMAS   81 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~-------~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~   81 (472)
                      .|++.+.||+|+||.||++.+.. +++.+|+|.+.....       ........+.+|+.++.. ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48899999999999999999987 688999999864321       122344567788888864 799999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhc-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           82 KTKIYFVMEYVKGGELFGKVA-----KGKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~-----~~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                      ++..|++|||++|++|.+++.     ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            999999999999999988763     2469999999999999999999996 7899999999999999999999999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC-CC-C
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK-FP-N  233 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~-~~-~  233 (472)
                      +.......   ......|+..|+|||.+.+..+ +.++|+||||+++|+|++|..||...+.......+...... .+ .
T Consensus       161 ~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
T cd08528         161 AKQKQPES---KLTSVVGTILYSCPEIVKNEPY-GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEG  236 (269)
T ss_pred             eeeccccc---ccccccCcccCcChhhhcCCCC-chHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcc
Confidence            87654322   2345678999999999976655 58999999999999999999999888777666666554433 22 2


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+++++.++|.+||..||++||++.|+.++
T Consensus       237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         237 MYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             cCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            578999999999999999999999998764


No 366
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=5.5e-39  Score=325.34  Aligned_cols=246  Identities=29%  Similarity=0.449  Sum_probs=195.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-EEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-KIYFV   88 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~~~lV   88 (472)
                      +.|.-...||+|+||.||+|.- .+|..||||.+.......   ..++.+|+.++.+++|||+|+|+|||.+.+ ..+||
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            4677778999999999999986 455999999876654321   355999999999999999999999999988 59999


Q ss_pred             EEecCCCcccchhcc--C-CCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           89 MEYVKGGELFGKVAK--G-KLKEDAARKYFQQLISAVDYCHSRG---VCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~--~-~l~e~~~~~i~~ql~~aL~yLH~~g---iiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      +||++.|+|.+.+..  + .+++....+|+.+++.||+|||+..   |+||||||.|||||++.+.||+|||+|......
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            999999999999865  3 7899999999999999999999863   999999999999999999999999999654431


Q ss_pred             cCCCccccc-cCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc------HHHHH-HHHhcc------C
Q 012021          163 HQDGLLHTT-CGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN------LMEMY-RKIGKA------E  228 (472)
Q Consensus       163 ~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~------~~~~~-~~i~~~------~  228 (472)
                        .....+. .||.+|+|||.+.. +..+.++|||||||+|.||+||+.|.+...      ..+.. ..+..+      .
T Consensus       231 --~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD  307 (361)
T KOG1187|consen  231 --DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVD  307 (361)
T ss_pred             --ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeC
Confidence              1112233 89999999999866 445689999999999999999998887532      11111 111111      1


Q ss_pred             CCCC-CCCC--HH---HHHHHhcccCCCCCCcCChhhhhc
Q 012021          229 FKFP-NWFA--PE---VRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       229 ~~~~-~~~s--~~---l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ..+. ...+  .+   +..+..+|++.+|..||++.++++
T Consensus       308 ~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  308 PRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             CCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            1111 2223  23   456778999999999999999854


No 367
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00  E-value=6.7e-39  Score=309.40  Aligned_cols=235  Identities=25%  Similarity=0.305  Sum_probs=193.3

Q ss_pred             eeEcccCCeEEEEEEEcCCC----------cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021           16 RLLGQGTFAKVHYARNLKTG----------MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g----------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      +.||+|+||.||+|.+..++          ..+++|++.....    ....+.+|+.+++.++||||+++++++.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            47999999999999998776          3588887754431    14678899999999999999999999887 778


Q ss_pred             EEEEEecCCCcccchhcc-C-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-------CEEEeeccch
Q 012021           86 YFVMEYVKGGELFGKVAK-G-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-------NLKVSDFGLS  156 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~-~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-------~vkl~DFGla  156 (472)
                      |+||||+.+|+|.+++.. + .+++..+..++.||+.||.|||++||+||||||+|||++.++       .+||+|||++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            999999999999999875 3 689999999999999999999999999999999999999888       7999999998


Q ss_pred             hhhhcccCCCccccccCCCcccChhhhccc-CCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccCCCCCCC
Q 012021          157 ALAESKHQDGLLHTTCGTPAYVAPEVINRR-GYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAEFKFPNW  234 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~  234 (472)
                      .....      .....++..|+|||++... ...+.++||||||+++|+|++ |..||...+......... .....+..
T Consensus       156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~  228 (259)
T cd05037         156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMP  228 (259)
T ss_pred             ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCC
Confidence            75433      1234577889999998766 344588999999999999999 688887765433333222 22223333


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ....+.++|.+||..+|.+|||+.++++
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         229 DCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            3478999999999999999999999985


No 368
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00  E-value=1.1e-38  Score=311.97  Aligned_cols=250  Identities=24%  Similarity=0.386  Sum_probs=203.6

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEc----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CC
Q 012021           10 QRYELGRLLGQGTFAKVHYARNL----KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS--KT   83 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~   83 (472)
                      ..|++.+.||+|+||.||+|...    .+++.||+|++......  .....+.+|+.+++.++||||+++++++..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence            57889999999999999999864    34889999999765432  345789999999999999999999999877  56


Q ss_pred             EEEEEEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           84 KIYFVMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      ..|++|||+++++|.+++...  .+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            899999999999999998764  499999999999999999999999999999999999999999999999999886642


Q ss_pred             ccCC-CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH---------------HHHHHh
Q 012021          162 KHQD-GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME---------------MYRKIG  225 (472)
Q Consensus       162 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~---------------~~~~i~  225 (472)
                      .... .......++..|+|||.+....+ +.++||||||+++++|++|..||.......               ....+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKF-SSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK  240 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCC-CcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence            2111 01112244567999999876655 478999999999999999999986542211               112222


Q ss_pred             c-cCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          226 K-AEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       226 ~-~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      . .....+..++.++.+++.+||..+|.+|||+.+|++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            2 123445567889999999999999999999999986


No 369
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00  E-value=3.2e-38  Score=307.72  Aligned_cols=244  Identities=17%  Similarity=0.271  Sum_probs=192.4

Q ss_pred             eeEcccCCeEEEEEEEcCC--CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQGTFAKVHYARNLKT--GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~--g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      +.||+|+||+||++.....  ...+++|.+.....  ....+.+.+|+.+++.++||||+++++.+......|+||||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence            3699999999999975433  34566777654432  2345678899999999999999999999999999999999999


Q ss_pred             CCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           94 GGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        94 gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      +|+|.+++..     ..+++..++.++.||+.||.|||++|++||||||+|||++.++.++|+|||++............
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            9999998864     24677788899999999999999999999999999999999999999999987542221111112


Q ss_pred             ccccCCCcccChhhhcccC------CCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC------CCCCCCC
Q 012021          169 HTTCGTPAYVAPEVINRRG------YDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE------FKFPNWF  235 (472)
Q Consensus       169 ~~~~gt~~y~aPE~~~~~~------~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~------~~~~~~~  235 (472)
                      ...+|++.|+|||++....      ..+.++||||||+++|+|++ |..||...+..+.+..+.+..      ...+..+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY  238 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence            3457889999999874321      12468999999999999996 578998777666665543332      2233457


Q ss_pred             CHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          236 APEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       236 s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      ++.+.+++..|| .+|.+||++++|++
T Consensus       239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         239 SERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             cHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            889999999999 67999999999964


No 370
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=4.6e-39  Score=339.54  Aligned_cols=250  Identities=26%  Similarity=0.391  Sum_probs=216.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcC-----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLK-----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ...-++.+.||+|+||+||+|+--.     ....||||.++...  ......+|+||+++|..++|||||+|+|+|..++
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            4456788999999999999998653     33579999987654  3346788999999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhcc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCE
Q 012021           84 KIYFVMEYVKGGELFGKVAK---------------GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~---------------~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~v  148 (472)
                      -+|+|+||+..|+|-.++..               .+|+..+.+.++.||+.|+.||-++.++||||...|.|+.++-.|
T Consensus       563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEE
Confidence            99999999999999877642               127889999999999999999999999999999999999999999


Q ss_pred             EEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc
Q 012021          149 KVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA  227 (472)
Q Consensus       149 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~  227 (472)
                      ||+||||++..-+...........-..+|||||.+....|. .+|||||+||+|||+++ |..||.+....+.+..|..+
T Consensus       643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFT-teSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g  721 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFT-TESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG  721 (774)
T ss_pred             EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCccc-chhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence            99999999866543332222233345689999999888876 79999999999999998 99999999998888888776


Q ss_pred             C-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhh
Q 012021          228 E-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIM  261 (472)
Q Consensus       228 ~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil  261 (472)
                      . ...|..++.++.+|+..||+.+|++||++.||-
T Consensus       722 ~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  722 QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            5 688999999999999999999999999999984


No 371
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.1e-40  Score=306.98  Aligned_cols=268  Identities=27%  Similarity=0.425  Sum_probs=217.7

Q ss_pred             CCCcCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEE
Q 012021            1 MENKGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMA   80 (472)
Q Consensus         1 m~~~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   80 (472)
                      |..++-...+.|+-..++|+|.||+||+|+...+|+.||+|++-.+.- +.+.-....+|+.+|..++|+|++.++++|.
T Consensus         8 ~~~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~   86 (376)
T KOG0669|consen    8 MYEPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICR   86 (376)
T ss_pred             ccCCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence            445666778899999999999999999999999999999987644321 2234455679999999999999999999874


Q ss_pred             e--------CCEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEE
Q 012021           81 S--------KTKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKV  150 (472)
Q Consensus        81 ~--------~~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl  150 (472)
                      +        ...+|+|+.+|+. +|+.++..  -+++..++.++++++..||.|+|...|+|||+||+|+||+.+|.+||
T Consensus        87 tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilkl  165 (376)
T KOG0669|consen   87 TKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKL  165 (376)
T ss_pred             hccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEe
Confidence            3        2358999999965 78888865  47999999999999999999999999999999999999999999999


Q ss_pred             eeccchhhhhcccC--CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-
Q 012021          151 SDFGLSALAESKHQ--DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-  227 (472)
Q Consensus       151 ~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-  227 (472)
                      +|||+++.+.....  ....+..+-|.+|.+||.+.+...++++.|||+-|||+.+|+|+.+-|.+.........|... 
T Consensus       166 ADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc  245 (376)
T KOG0669|consen  166 ADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC  245 (376)
T ss_pred             eccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence            99999976543322  112344567999999999998887889999999999999999999998877665554444210 


Q ss_pred             -CC--------------------CCCC-------------CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          228 -EF--------------------KFPN-------------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       228 -~~--------------------~~~~-------------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                       .+                    ++|.             .-.+++.+|+.++|..||.+|++++++++|.||.+.-
T Consensus       246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence             00                    0111             1145788999999999999999999999999998743


No 372
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2e-39  Score=317.99  Aligned_cols=264  Identities=29%  Similarity=0.466  Sum_probs=219.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch----hhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV----GMIDQIKREISVMRLVRHPNVVELYEVMASK   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   82 (472)
                      .|.+||-++.+||+|||++||+|.|...+++||+|+-...+.++.    ...+...+|..|.+.|.||.||++|++|.-+
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            577899999999999999999999999999999999765554432    3345677999999999999999999999654


Q ss_pred             -CEEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCcEEEc---CCCCEEEeeccc
Q 012021           83 -TKIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSR--GVCHRDLKPENLLLD---EHGNLKVSDFGL  155 (472)
Q Consensus        83 -~~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~--giiHrDlKp~NILld---~~g~vkl~DFGl  155 (472)
                       +..|-|+|||+|.+|.-+++. .-++|.+++.|+.||+.||.||...  .|||.||||.||||-   .-|.+||.||||
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence             567889999999999999987 4689999999999999999999976  699999999999994   456899999999


Q ss_pred             hhhhhcccCC-----CccccccCCCcccChhhhccc---CCCCCcccchhhhHHHHHHhcCCCCCCCCcHH-HH--HHHH
Q 012021          156 SALAESKHQD-----GLLHTTCGTPAYVAPEVINRR---GYDGSKADIWSCGVILYVLLAGYLPFHDSNLM-EM--YRKI  224 (472)
Q Consensus       156 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~-~~--~~~i  224 (472)
                      +........+     .+.....||-+|++||.+.-.   +..+.+.||||.|||+|.++.|+.||...... ++  +..|
T Consensus       620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI  699 (775)
T KOG1151|consen  620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI  699 (775)
T ss_pred             hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence            9987654433     134456799999999987432   33457899999999999999999999765332 22  2223


Q ss_pred             hc-cCCCCC--CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          225 GK-AEFKFP--NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       225 ~~-~~~~~~--~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      .+ .+..||  +.+++++++||++||...-+.|.++.++-.||+|....
T Consensus       700 lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  700 LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence            33 345555  45899999999999999999999999999999997644


No 373
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00  E-value=4.1e-39  Score=332.88  Aligned_cols=241  Identities=33%  Similarity=0.539  Sum_probs=197.5

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC------
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT------   83 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~------   83 (472)
                      +-|...+.||+||||.||+++++.+|+.||||.+++....  .-.+..-+|+++|++++|||||+++++=++..      
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~--r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~   90 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL--RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR   90 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhccc--chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence            4688889999999999999999999999999999876533  34678899999999999999999999865544      


Q ss_pred             EEEEEEEecCCCcccchhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE--cCCCC--EEEeeccc
Q 012021           84 KIYFVMEYVKGGELFGKVAK----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL--DEHGN--LKVSDFGL  155 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl--d~~g~--vkl~DFGl  155 (472)
                      ...+|||||.||+|+..+.+    .+|+|.+.+.++..+..||.|||++||+||||||.||++  .++|.  .||+|||.
T Consensus        91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            56899999999999999975    479999999999999999999999999999999999988  34453  79999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc----H-HHHHHHHhc----
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN----L-MEMYRKIGK----  226 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~----~-~~~~~~i~~----  226 (472)
                      |+-...+   ....+..||+.|.+||.+...++++..+|.||+||++|+++||.+||....    . .-++..+.+    
T Consensus       171 Arel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~  247 (732)
T KOG4250|consen  171 ARELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG  247 (732)
T ss_pred             cccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence            9976543   357888999999999999865666789999999999999999999996422    1 123332221    


Q ss_pred             ----------c------CCCCCCCCCHH----HHHHHhcccCCCCCCcC
Q 012021          227 ----------A------EFKFPNWFAPE----VRRLLSKILDPNPNTRI  255 (472)
Q Consensus       227 ----------~------~~~~~~~~s~~----l~~li~~~L~~dP~~Rp  255 (472)
                                +      .+++|..+++.    +..++..+|..+|.+|.
T Consensus       248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                      1      12233344443    34567778999999998


No 374
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00  E-value=1e-37  Score=334.00  Aligned_cols=254  Identities=20%  Similarity=0.312  Sum_probs=179.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCC----CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEE----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKT----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEV----   78 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~----   78 (472)
                      .-.++|++.+.||+|+||.||+|.+..+    +..||+|.+......     +....|  .++...+.++..+...    
T Consensus       129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~  201 (566)
T PLN03225        129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEP  201 (566)
T ss_pred             CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence            3457899999999999999999999988    999999987543211     111111  1122222222222211    


Q ss_pred             --EEeCCEEEEEEEecCCCcccchhccCCC---------------------CHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 012021           79 --MASKTKIYFVMEYVKGGELFGKVAKGKL---------------------KEDAARKYFQQLISAVDYCHSRGVCHRDL  135 (472)
Q Consensus        79 --~~~~~~~~lV~E~~~gg~L~~~i~~~~l---------------------~e~~~~~i~~ql~~aL~yLH~~giiHrDl  135 (472)
                        ...+..+++||||+.+++|.+++....+                     .+..+..++.||+.||.|||++||+||||
T Consensus       202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence              2456789999999999999888764321                     23456789999999999999999999999


Q ss_pred             CCCcEEEcC-CCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCC---------------------CCcc
Q 012021          136 KPENLLLDE-HGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYD---------------------GSKA  193 (472)
Q Consensus       136 Kp~NILld~-~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---------------------~~~~  193 (472)
                      ||+|||++. ++.+||+|||+|+...... .......+||+.|+|||.+......                     ..++
T Consensus       282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             CHHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            999999986 6799999999997654322 1223567899999999976432211                     1356


Q ss_pred             cchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCC---------------------CCCCCHHHHHHHhcccCCCCC
Q 012021          194 DIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKF---------------------PNWFAPEVRRLLSKILDPNPN  252 (472)
Q Consensus       194 DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~~s~~l~~li~~~L~~dP~  252 (472)
                      |||||||+||+|+++..|+... .......+.......                     .........+||.+||+.||+
T Consensus       361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~  439 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR  439 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence            9999999999999988775432 112222222111110                     111223456899999999999


Q ss_pred             CcCChhhhhcCcccccC
Q 012021          253 TRISMTKIMENSWFRKG  269 (472)
Q Consensus       253 ~Rpt~~eil~h~~f~~~  269 (472)
                      +|||+.++|+||||+..
T Consensus       440 kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        440 QRISAKAALAHPYFDRE  456 (566)
T ss_pred             cCCCHHHHhCCcCcCCC
Confidence            99999999999999763


No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-37  Score=327.92  Aligned_cols=254  Identities=29%  Similarity=0.489  Sum_probs=222.9

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEE-----eC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMA-----SK   82 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~-----~~   82 (472)
                      .+.|++.+.+|.|.+|+||+++++.+++..|+|+.+...    ..-+.+..|.+||+.+ .|||++.+|+++.     .+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence            457999999999999999999999999999999987654    3347788999999887 5999999999984     35


Q ss_pred             CEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                      +.+|||||||.||+..|+++.   +++.|..+..+++.++.|+.+||.+.++|||||=.|||++.+|.|||+|||+++..
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl  173 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  173 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence            789999999999999999875   58999999999999999999999999999999999999999999999999999876


Q ss_pred             hcccCCCccccccCCCcccChhhhccc-----CCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCC---C
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRR-----GYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFK---F  231 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~---~  231 (472)
                      .....  .-.+..|||.|||||++...     .|+ ..+|+||||++..||..|.+|+-+..++...-+|.+++++   -
T Consensus       174 dsT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd-~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkr  250 (953)
T KOG0587|consen  174 DSTVG--RRNTFIGTPYWMAPEVIACDESPDATYD-YRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKR  250 (953)
T ss_pred             ecccc--cccCcCCCcccccceeeecccCCCCCcc-cccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccc
Confidence            65433  34678999999999998543     233 6899999999999999999999999888777777666542   2


Q ss_pred             CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          232 PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       232 ~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      |..++.++.++|..||..|..+||++.++++|||+..+
T Consensus       251 p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  251 PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             hhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence            45578999999999999999999999999999999853


No 376
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.2e-37  Score=336.08  Aligned_cols=251  Identities=24%  Similarity=0.406  Sum_probs=212.5

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCc-----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGM-----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT   83 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~-----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   83 (472)
                      ...-++++.||+|+||.||.|.......     .||||.+.+..  +.+....+.+|..+|+.++|||||+++|++-+..
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            4467889999999999999998875433     38888876543  4566788999999999999999999999999999


Q ss_pred             EEEEEEEecCCCcccchhccC--------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           84 KIYFVMEYVKGGELFGKVAKG--------KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~~--------~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                      ..++++||+.||+|..+|++.        .++......++.||+.|+.||+++++|||||...|+||++...+||+|||+
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence            999999999999999999753        488899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHH-HHhccCCCCCC
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYR-KIGKAEFKFPN  233 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~-~i~~~~~~~~~  233 (472)
                      |+..-.......-....-...|||||.+....+ +.++|||||||++||++| |..||.+.+..+... -...++...|.
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iF-tskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~  927 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIF-TSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS  927 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhccc-ccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC
Confidence            994322111110001112246999999987655 589999999999999998 999999988877766 44556788889


Q ss_pred             CCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          234 WFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       234 ~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .++..+.+++..||..+|++||++..|++
T Consensus       928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            99999999999999999999999999987


No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00  E-value=1.2e-36  Score=288.63  Aligned_cols=239  Identities=47%  Similarity=0.849  Sum_probs=207.8

Q ss_pred             CCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccchh
Q 012021           22 TFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGKV  101 (472)
Q Consensus        22 ~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i  101 (472)
                      +||.||+|.+..+|+.+|+|++........  .+.+.+|+..++.++|+||+++++++......++++||+.+++|.+++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            689999999998999999999976543221  578999999999999999999999999999999999999999999998


Q ss_pred             ccC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccCh
Q 012021          102 AKG-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAP  180 (472)
Q Consensus       102 ~~~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP  180 (472)
                      ... .+++..++.++.+++.++.|||+.|++|+||+|.||+++.++.++|+|||++.......   ......++..|+||
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~p  155 (244)
T smart00220       79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAP  155 (244)
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCH
Confidence            764 48999999999999999999999999999999999999999999999999988654432   23456789999999


Q ss_pred             hhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-CcHHHHHHHHhccCCCCCCC---CCHHHHHHHhcccCCCCCCcCC
Q 012021          181 EVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-SNLMEMYRKIGKAEFKFPNW---FAPEVRRLLSKILDPNPNTRIS  256 (472)
Q Consensus       181 E~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~---~s~~l~~li~~~L~~dP~~Rpt  256 (472)
                      |.+....++ .++||||||++++++++|..||.. .+.......+..........   ++.++.+++.+||..+|++||+
T Consensus       156 E~~~~~~~~-~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  234 (244)
T smart00220      156 EVLLGKGYG-KAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLT  234 (244)
T ss_pred             HHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccC
Confidence            999766665 699999999999999999999988 55556666665555443332   7889999999999999999999


Q ss_pred             hhhhhcCccc
Q 012021          257 MTKIMENSWF  266 (472)
Q Consensus       257 ~~eil~h~~f  266 (472)
                      +.++++||||
T Consensus       235 ~~~~~~~~~~  244 (244)
T smart00220      235 AEEALQHPFF  244 (244)
T ss_pred             HHHHhhCCCC
Confidence            9999999997


No 378
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00  E-value=1.6e-38  Score=316.93  Aligned_cols=255  Identities=32%  Similarity=0.507  Sum_probs=215.9

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC------CCCeeeEEE
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR------HPNVVELYE   77 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~l~~   77 (472)
                      -|++|.+||.+....|+|-|++|..|.+..-|..||||+|....+    +.+.=.+|+.||+.|+      --|+++|+.
T Consensus       426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r  501 (752)
T KOG0670|consen  426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFR  501 (752)
T ss_pred             hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence            478999999999999999999999999999999999999976643    3455678999999996      358999999


Q ss_pred             EEEeCCEEEEEEEecCCCcccchhcc-C---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC-EEEee
Q 012021           78 VMASKTKIYFVMEYVKGGELFGKVAK-G---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN-LKVSD  152 (472)
Q Consensus        78 ~~~~~~~~~lV~E~~~gg~L~~~i~~-~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~-vkl~D  152 (472)
                      .|...+++|||+|-+ ..+|.+.+.+ |   +|....++.|++||+.||..|...||+|.||||+|||+++..+ +||||
T Consensus       502 ~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD  580 (752)
T KOG0670|consen  502 HFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD  580 (752)
T ss_pred             HhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence            999999999999988 4578888875 3   5889999999999999999999999999999999999998764 79999


Q ss_pred             ccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC
Q 012021          153 FGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP  232 (472)
Q Consensus       153 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~  232 (472)
                      ||.|..+...    ..+.+.-+..|.|||++.+.+|+ ...|+||.||+||||.||+..|++.....++.........+|
T Consensus       581 fGSA~~~~en----eitPYLVSRFYRaPEIiLG~~yd-~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p  655 (752)
T KOG0670|consen  581 FGSASFASEN----EITPYLVSRFYRAPEIILGLPYD-YPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP  655 (752)
T ss_pred             Cccccccccc----cccHHHHHHhccCcceeecCccc-CCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence            9998766543    23445567789999999999998 889999999999999999999998776666554432222222


Q ss_pred             CC-----------------------------------------------------C-------CHHHHHHHhcccCCCCC
Q 012021          233 NW-----------------------------------------------------F-------APEVRRLLSKILDPNPN  252 (472)
Q Consensus       233 ~~-----------------------------------------------------~-------s~~l~~li~~~L~~dP~  252 (472)
                      ..                                                     +       -..+++|+.+||..||+
T Consensus       656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~  735 (752)
T KOG0670|consen  656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE  735 (752)
T ss_pred             HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence            11                                                     1       13588999999999999


Q ss_pred             CcCChhhhhcCccccc
Q 012021          253 TRISMTKIMENSWFRK  268 (472)
Q Consensus       253 ~Rpt~~eil~h~~f~~  268 (472)
                      +|.|+.++|.||||..
T Consensus       736 KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  736 KRITVNQALKHPFITE  751 (752)
T ss_pred             hcCCHHHHhcCCcccC
Confidence            9999999999999964


No 379
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00  E-value=5.1e-38  Score=285.73  Aligned_cols=251  Identities=27%  Similarity=0.512  Sum_probs=205.2

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC--E
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKT--K   84 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~--~   84 (472)
                      ..++|++.+++|+|.|++||.|++..+++.++||+++.-+      .+.+++|+.||+.|. ||||++++++..+..  .
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            3568999999999999999999999999999999986543      367999999999997 999999999986653  4


Q ss_pred             EEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC-CCEEEeeccchhhhhccc
Q 012021           85 IYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH-GNLKVSDFGLSALAESKH  163 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~-g~vkl~DFGla~~~~~~~  163 (472)
                      ..+|+||+++.+...+-  ..++.-.++.++.+|+.||+|||+.||+|||+||.|++||.. ..++|+|+|||.+.....
T Consensus       110 paLiFE~v~n~Dfk~ly--~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~  187 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLY--PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK  187 (338)
T ss_pred             chhHhhhhccccHHHHh--hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence            67999999886654332  458888999999999999999999999999999999999965 469999999998775433


Q ss_pred             CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC-CcHHHHHHHHh-------------ccCC
Q 012021          164 QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD-SNLMEMYRKIG-------------KAEF  229 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-~~~~~~~~~i~-------------~~~~  229 (472)
                         .....+.+..|--||.+..-......-|+|||||+|..|+..+.||.. .+..+..-+|.             +-..
T Consensus       188 ---eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i  264 (338)
T KOG0668|consen  188 ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI  264 (338)
T ss_pred             ---eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence               245667888999999997776666899999999999999999999753 33333333331             1011


Q ss_pred             CC-------------CCC-----------CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          230 KF-------------PNW-----------FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       230 ~~-------------~~~-----------~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .+             .+|           .++++.+|+.++|..|-.+|+|+.|.+.||||...
T Consensus       265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            11             111           46999999999999999999999999999999753


No 380
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00  E-value=3.3e-38  Score=292.64  Aligned_cols=252  Identities=24%  Similarity=0.451  Sum_probs=207.6

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHH-HHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISV-MRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      .+-+..||.|+||+|++-.++.+|+..|||.|.....  .....++..|.+. ++.-+.||||++||..-.++..|+.||
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            3445679999999999999999999999999987664  2344667777765 566679999999999999999999999


Q ss_pred             ecCCCcc---cchh---ccCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           91 YVKGGEL---FGKV---AKGKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        91 ~~~gg~L---~~~i---~~~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++.- +|   +.++   .+..++|..+-.+....+.||+||... .|+|||+||+|||||..|.+||||||++......-
T Consensus       144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si  222 (361)
T KOG1006|consen  144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI  222 (361)
T ss_pred             HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence            9954 33   2222   236799999999999999999999965 89999999999999999999999999987554322


Q ss_pred             CCCccccccCCCcccChhhhcc--cCCCCCcccchhhhHHHHHHhcCCCCCCCCc-HHHHHHHHhccCCCC---CC---C
Q 012021          164 QDGLLHTTCGTPAYVAPEVINR--RGYDGSKADIWSCGVILYVLLAGYLPFHDSN-LMEMYRKIGKAEFKF---PN---W  234 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~-~~~~~~~i~~~~~~~---~~---~  234 (472)
                      .   .+...|...|||||.+..  .+|+ .++||||||++|||+.||..|+..-+ ..+....+..+.++.   +.   .
T Consensus       223 A---kT~daGCrpYmAPERi~p~~~gyD-iRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~  298 (361)
T KOG1006|consen  223 A---KTVDAGCRPYMAPERIDPSDKGYD-IRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVH  298 (361)
T ss_pred             H---hhhccCCccccChhccCCccCCcc-hhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccc
Confidence            1   234579999999999854  3566 89999999999999999999998754 456677777666543   22   2


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCC
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGL  270 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~  270 (472)
                      ++..+..+|.-||.+|-+.||.+.+++.+||++...
T Consensus       299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  299 YSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             cCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence            788999999999999999999999999999998643


No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00  E-value=1.4e-35  Score=311.00  Aligned_cols=261  Identities=20%  Similarity=0.283  Sum_probs=190.1

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEc----------------CCCcEEEEEEeecccccch-----------hhHHHHHH
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNL----------------KTGMSVAIKIIDKEKVLKV-----------GMIDQIKR   59 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~----------------~~g~~vAiK~i~~~~~~~~-----------~~~~~~~~   59 (472)
                      +-.++|++.++||+|+||.||+|...                ..++.||||.+........           ...+....
T Consensus       142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v  221 (507)
T PLN03224        142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV  221 (507)
T ss_pred             ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence            45679999999999999999999753                2456799999864321100           01122334


Q ss_pred             HHHHHHhcCCCCe-----eeEEEEEEe--------CCEEEEEEEecCCCcccchhcc-----------------------
Q 012021           60 EISVMRLVRHPNV-----VELYEVMAS--------KTKIYFVMEYVKGGELFGKVAK-----------------------  103 (472)
Q Consensus        60 Ei~il~~l~hpnI-----v~l~~~~~~--------~~~~~lV~E~~~gg~L~~~i~~-----------------------  103 (472)
                      |+.++..++|.++     +++++++..        ++..|+||||+.+++|.+++..                       
T Consensus       222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~  301 (507)
T PLN03224        222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM  301 (507)
T ss_pred             HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence            6777777766554     677777643        3568999999999999887642                       


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChh
Q 012021          104 --GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPE  181 (472)
Q Consensus       104 --~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE  181 (472)
                        ..+++..++.++.|++.+|.|||++||+||||||+|||++.++.+||+|||++........ .......+|+.|+|||
T Consensus       302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPE  380 (507)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeChh
Confidence              1235677889999999999999999999999999999999999999999999875433211 1112234589999999


Q ss_pred             hhcccCC--------------------C-CCcccchhhhHHHHHHhcCCC-CCCCCcH-----------HHHHHHHhccC
Q 012021          182 VINRRGY--------------------D-GSKADIWSCGVILYVLLAGYL-PFHDSNL-----------MEMYRKIGKAE  228 (472)
Q Consensus       182 ~~~~~~~--------------------~-~~~~DiwSlGvil~~lltG~~-Pf~~~~~-----------~~~~~~i~~~~  228 (472)
                      ++.....                    . ..+.||||+||++|+|++|.+ ||.+...           ....+.+....
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            9754321                    1 124699999999999999986 7754211           11122223334


Q ss_pred             CCCC--CCCCHHHHHHHhcccCCCC---CCcCChhhhhcCccccc
Q 012021          229 FKFP--NWFAPEVRRLLSKILDPNP---NTRISMTKIMENSWFRK  268 (472)
Q Consensus       229 ~~~~--~~~s~~l~~li~~~L~~dP---~~Rpt~~eil~h~~f~~  268 (472)
                      +.++  +..++..++|+.+||..+|   .+|+|++|+|+||||..
T Consensus       461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            4443  4478999999999999766   68999999999999964


No 382
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.9e-35  Score=291.51  Aligned_cols=134  Identities=29%  Similarity=0.509  Sum_probs=117.9

Q ss_pred             cCCccc-CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-----C---CCeee
Q 012021            4 KGSILM-QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-----H---PNVVE   74 (472)
Q Consensus         4 ~g~~l~-~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----h---pnIv~   74 (472)
                      .|.++. +||.+.++||-|-|++||+|.|..+.+.||+|+.+....    ..+....||.+|+.++     |   .+||+
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh----YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH----YTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH----HHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            477777 899999999999999999999999999999999876543    3466778999999884     2   47999


Q ss_pred             EEEEEE----eCCEEEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEE
Q 012021           75 LYEVMA----SKTKIYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLL  142 (472)
Q Consensus        75 l~~~~~----~~~~~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILl  142 (472)
                      |++.|.    .+.++++|+|++ |.+|..+|..   +.++...++.|++||+.||+|||.+ ||||.||||+|||+
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence            999995    456999999999 7788888865   5799999999999999999999976 99999999999998


No 383
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=6.8e-36  Score=306.67  Aligned_cols=255  Identities=25%  Similarity=0.448  Sum_probs=217.6

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCC-C--cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKT-G--MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKI   85 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-g--~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   85 (472)
                      .++..+.++||+|.||.|+.|.+... |  -.||||.+......  ..++.|.+|+.+|..|+|||+++|||+..+ ..+
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~  185 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA  185 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence            44567789999999999999998753 3  36999999776643  267889999999999999999999999887 678


Q ss_pred             EEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc
Q 012021           86 YFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK  162 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~  162 (472)
                      .+|||++++|+|.+.+.+   ..|-......|+.||+.|+.||.++++|||||...||||-....|||+||||.+-....
T Consensus       186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            899999999999999976   46888999999999999999999999999999999999999999999999999877654


Q ss_pred             cCCCccc-cccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHH
Q 012021          163 HQDGLLH-TTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEV  239 (472)
Q Consensus       163 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l  239 (472)
                      .....+. ...-...|+|||.+....+. .++|||++||++|||++ |+.||.+.+...+.++|..+ ....|+.++.++
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFS-haSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedI  344 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFS-HASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDI  344 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhcccccc-ccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHH
Confidence            3321111 11224469999999887775 89999999999999998 89999999999888888754 467788899999


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      .+++..||..+|.+|||+..|.+.-+.+
T Consensus       345 Y~imk~cWah~paDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  345 YQIMKNCWAHNPADRPTFSAIREDLVLA  372 (1039)
T ss_pred             HHHHHHhccCCccccccHHHHHHhHHHH
Confidence            9999999999999999999997654443


No 384
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00  E-value=3.1e-36  Score=286.21  Aligned_cols=253  Identities=29%  Similarity=0.481  Sum_probs=210.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASK----   82 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   82 (472)
                      +.-.||.-++.+|.|+- .|..|-|.-+++.||+|.+.... ......++..+|...+..++|+||++++.+|.-.    
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence            34568999999999999 77789999999999999987663 3344567888999999999999999999998543    


Q ss_pred             --CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021           83 --TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus        83 --~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                        ...|+|||++.. +|...+. -.++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||+|+...
T Consensus        92 ~~~e~y~v~e~m~~-nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   92 EFQEVYLVMELMDA-NLCQVIL-MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHHhHHHHHHhhhh-HHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence              358999999954 6766665 457778899999999999999999999999999999999999999999999998654


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhcc-------------
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKA-------------  227 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~-------------  227 (472)
                      ..   -..+..+.|..|.|||++.+.+|. ..+||||+||++.||++|...|.+.+..+.+.++...             
T Consensus       170 ~~---~~mtpyVvtRyyrapevil~~~~k-e~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  170 TD---FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cc---cccCchhheeeccCchheeccCCc-ccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence            32   235667899999999999999865 8899999999999999999999887665555544210             


Q ss_pred             --------------CCC----CCCC-----------CCHHHHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          228 --------------EFK----FPNW-----------FAPEVRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       228 --------------~~~----~~~~-----------~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                                    .+.    +|++           -+..+++++.+||..||++|.+++++|.|||++
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                          011    1221           134688999999999999999999999999997


No 385
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00  E-value=7.8e-36  Score=301.14  Aligned_cols=201  Identities=30%  Similarity=0.563  Sum_probs=182.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHH-----HHHHHHHHHHhcC---CCCeeeEEEEEEe
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMID-----QIKREISVMRLVR---HPNVVELYEVMAS   81 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~-----~~~~Ei~il~~l~---hpnIv~l~~~~~~   81 (472)
                      ..|..++.||+|+||.|++|.++.+...|+||.|.|+++....+++     .+--||+||..++   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            3699999999999999999999999999999999998875433332     3557999999998   9999999999999


Q ss_pred             CCEEEEEEEec-CCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021           82 KTKIYFVMEYV-KGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        82 ~~~~~lV~E~~-~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                      ++.+|++||-. +|-+||++|+. ..++|.++..+|+|++.|+++||+.||+|||||-+|+.++.+|-+||+|||.|...
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence            99999999965 45699999986 57999999999999999999999999999999999999999999999999998865


Q ss_pred             hcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC
Q 012021          160 ESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD  214 (472)
Q Consensus       160 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~  214 (472)
                      .    .+...+.+||..|.|||++.+..|-+..-|||+||++||.++..+.||..
T Consensus       721 k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  721 K----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             c----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            4    45578899999999999999999999999999999999999999999853


No 386
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.7e-35  Score=296.78  Aligned_cols=241  Identities=26%  Similarity=0.466  Sum_probs=212.1

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      ..+..+||-|-||+||.+.++...-.||||.++.+.    -.++.+..|+.+|+.++|||+|+|+++|..+--.|||+||
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf  344 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF  344 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence            345678999999999999999988999999986543    2357889999999999999999999999999999999999


Q ss_pred             cCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcc
Q 012021           92 VKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLL  168 (472)
Q Consensus        92 ~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~  168 (472)
                      +..|+|.++++.   .-++.-....++.||.+|++||..+++|||||...|.|+.++-.+||+||||++++.....    
T Consensus       345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY----  420 (1157)
T KOG4278|consen  345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY----  420 (1157)
T ss_pred             ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCce----
Confidence            999999999975   3477778889999999999999999999999999999999999999999999998764332    


Q ss_pred             ccccC---CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHH
Q 012021          169 HTTCG---TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       169 ~~~~g---t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li  243 (472)
                      +...|   ..-|.|||-+....+. .++|||+|||+|||+.| |--||.+.+....|..+.++ ...-|..+++.+.+|+
T Consensus       421 TAHAGAKFPIKWTAPEsLAyNtFS-iKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLM  499 (1157)
T KOG4278|consen  421 TAHAGAKFPIKWTAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELM  499 (1157)
T ss_pred             ecccCccCcccccCcccccccccc-cchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHH
Confidence            22233   3459999998777665 89999999999999998 88999999999988888776 3567889999999999


Q ss_pred             hcccCCCCCCcCChhhhh
Q 012021          244 SKILDPNPNTRISMTKIM  261 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil  261 (472)
                      +.||+++|..||+++||-
T Consensus       500 raCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  500 RACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             HHHhcCCcccCccHHHHH
Confidence            999999999999999984


No 387
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00  E-value=8.2e-35  Score=332.18  Aligned_cols=237  Identities=24%  Similarity=0.343  Sum_probs=187.7

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ..|...+.||+|+||.||+|.+..++..||+|.+......       ...|+.+++.++|||||++++++.+....|+||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~  762 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH  762 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence            3466678999999999999999999999999998644321       235688999999999999999999999999999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCC
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCH---SRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDG  166 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH---~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~  166 (472)
                      ||+++|+|.+++.  .+++..+.+++.|++.|++|||   +.+|+||||||+||+++.++..++. ||.+.....     
T Consensus       763 Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----  834 (968)
T PLN00113        763 EYIEGKNLSEVLR--NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----  834 (968)
T ss_pred             eCCCCCcHHHHHh--cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----
Confidence            9999999999986  4889999999999999999999   6699999999999999999888775 665443221     


Q ss_pred             ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH-----HHHHHHHhc-c------CCCC---
Q 012021          167 LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL-----MEMYRKIGK-A------EFKF---  231 (472)
Q Consensus       167 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~-----~~~~~~i~~-~------~~~~---  231 (472)
                       .....||+.|+|||++.+..+. .++|||||||++|||+||+.||+....     ....+.... .      ....   
T Consensus       835 -~~~~~~t~~y~aPE~~~~~~~~-~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  912 (968)
T PLN00113        835 -DTKCFISSAYVAPETRETKDIT-EKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD  912 (968)
T ss_pred             -CCCccccccccCcccccCCCCC-cccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC
Confidence             1234689999999999877665 899999999999999999999854211     111111000 0      0011   


Q ss_pred             ---CCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          232 ---PNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       232 ---~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                         +.....++.+++.+||+.||++|||+.++++.
T Consensus       913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence               11112356789999999999999999999875


No 388
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00  E-value=6.5e-35  Score=294.73  Aligned_cols=255  Identities=21%  Similarity=0.356  Sum_probs=210.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -..+..++++||+|-||+|.+++- ..+..||+|.++.....  .....+.+||++|.+|+||||++++++|..++-+++
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            345778999999999999999985 45699999999876543  345789999999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccCC---CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           88 VMEYVKGGELFGKVAKGK---LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~~---l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      |+||++.|+|.+++....   +.-....+++.||++|++||.+.+++||||.+.|+|+|.++++||+|||+++..-+...
T Consensus       613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCc
Confidence            999999999999997652   24456677999999999999999999999999999999999999999999986544333


Q ss_pred             CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHh--cCCCCCCCCcHHHHHHHHhc--------cCCCCCCC
Q 012021          165 DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLL--AGYLPFHDSNLMEMYRKIGK--------AEFKFPNW  234 (472)
Q Consensus       165 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~ll--tG~~Pf~~~~~~~~~~~i~~--------~~~~~~~~  234 (472)
                      ...-...+-...|||||.+....+. .++|+|++|+++||++  +...||.........+....        .....|.-
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFt-taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~  771 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFT-TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPA  771 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhcccc-chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCc
Confidence            2222233446789999998877775 7999999999999875  57899988776655554432        12345777


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ++.++.+++.+||..+-++||+++++-.  +|++
T Consensus       772 cp~~lyelml~Cw~~es~~RPsFe~lh~--~lq~  803 (807)
T KOG1094|consen  772 CPQGLYELMLRCWRRESEQRPSFEQLHL--FLQE  803 (807)
T ss_pred             CcHHHHHHHHHHhchhhhcCCCHHHHHH--HHHH
Confidence            8999999999999999999999999943  3543


No 389
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00  E-value=3.4e-35  Score=305.18  Aligned_cols=250  Identities=24%  Similarity=0.422  Sum_probs=218.0

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCC---cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTG---MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIY   86 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   86 (472)
                      ..-.|.+.||.|.||+|+.++.+..|   ..||||.++....  +.....+..|+.||-+..||||++|.|+.....-+.
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt--ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM  706 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM  706 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc--HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence            44568899999999999999988766   4699999976543  344567889999999999999999999999999999


Q ss_pred             EEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC
Q 012021           87 FVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ  164 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~  164 (472)
                      +|+||+++|+|..+++.  |.++..++.-+++.|+.|++||-+.|++||||...|||++.|-.+|++||||++..+... 
T Consensus       707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~-  785 (996)
T KOG0196|consen  707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP-  785 (996)
T ss_pred             EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC-
Confidence            99999999999998865  789999999999999999999999999999999999999999999999999999776544 


Q ss_pred             CCccccccCC--CcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHH
Q 012021          165 DGLLHTTCGT--PAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVR  240 (472)
Q Consensus       165 ~~~~~~~~gt--~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~  240 (472)
                      +...++.-|-  ..|.|||.+....+. .++||||+|++|||.++ |+.||.+.+..+....|..+ ..+.|..++..+.
T Consensus       786 ~~~ytt~GGKIPiRWTAPEAIa~RKFT-sASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  786 EAAYTTLGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALY  864 (996)
T ss_pred             CccccccCCccceeecChhHhhhcccC-chhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHH
Confidence            3333343343  469999999888775 78999999999998775 99999999988888888765 3555667899999


Q ss_pred             HHHhcccCCCCCCcCChhhhhcC
Q 012021          241 RLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       241 ~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .|+..||++|-.+||.+++|+++
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHH
Confidence            99999999999999999999875


No 390
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.6e-36  Score=279.82  Aligned_cols=257  Identities=26%  Similarity=0.454  Sum_probs=209.3

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-----EEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKT-----KIY   86 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~   86 (472)
                      .+-.+.||.|+||.||.+.|..+|+.||+|.+..-. .+--..+++.+|+.+|.-.+|.|++..+++....+     .+|
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            345688999999999999999999999999875322 22334578889999999999999999998875544     477


Q ss_pred             EEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           87 FVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        87 lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      +++|.+. .+|-..|.. ..++.+.++-+++||++||+|||+.||.||||||.|+|++.|..+||||||+|+..+.... 
T Consensus       134 V~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~-  211 (449)
T KOG0664|consen  134 VLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR-  211 (449)
T ss_pred             HHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh-
Confidence            8888884 477776654 7899999999999999999999999999999999999999999999999999987654332 


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHh--------------------
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIG--------------------  225 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~--------------------  225 (472)
                      ..++..+-|.+|.|||++.+...++.+.||||.|||+.||+..+..|...++.+..+.|.                    
T Consensus       212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence            234455678999999999988777789999999999999999999998877655544432                    


Q ss_pred             ---ccCCCCCC-----------CCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          226 ---KAEFKFPN-----------WFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       226 ---~~~~~~~~-----------~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                         ++...-|.           .-..+...++..+|.+||.+|.+.++.+.|++..++..
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence               22222221           12346778999999999999999999999999877543


No 391
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00  E-value=7.8e-35  Score=295.66  Aligned_cols=244  Identities=28%  Similarity=0.467  Sum_probs=206.0

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCC--C--cEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKT--G--MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~--g--~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -.+.+.||+|-||.||.|....-  |  -.||||..+.+...  +..+.+..|..+|+.++||||++++|++.+ .-.|+
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi  467 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI  467 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence            34567899999999999987542  3  35889988765432  336789999999999999999999999965 45899


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |||+++-|+|+.++..  ..++......|..||..||.|||+.+++||||...|||+.....+||+||||++....... 
T Consensus       468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y-  546 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY-  546 (974)
T ss_pred             EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch-
Confidence            9999999999999975  4689999999999999999999999999999999999999999999999999997764332 


Q ss_pred             CccccccC--CCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHH
Q 012021          166 GLLHTTCG--TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRR  241 (472)
Q Consensus       166 ~~~~~~~g--t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~  241 (472)
                        .+...|  ..-|||||-+.-..+. .++|||-|||.+||++. |..||.+-...+..-.+.++ +.++|+.++|.+..
T Consensus       547 --YkaS~~kLPIKWmaPESINfRrFT-tASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYs  623 (974)
T KOG4257|consen  547 --YKASRGKLPIKWMAPESINFRRFT-TASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYS  623 (974)
T ss_pred             --hhccccccceeecCccccchhccc-chhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHH
Confidence              222333  3359999998777665 78999999999999775 99999987766666666665 47899999999999


Q ss_pred             HHhcccCCCCCCcCChhhhhc
Q 012021          242 LLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       242 li~~~L~~dP~~Rpt~~eil~  262 (472)
                      |+.+||..+|.+||++.+|..
T Consensus       624 lmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  624 LMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             HHHHHhccCcccCCcHHHHHH
Confidence            999999999999999988754


No 392
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00  E-value=4.9e-35  Score=299.67  Aligned_cols=255  Identities=29%  Similarity=0.495  Sum_probs=222.7

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .++|++++.+|.|+||.||+|+|+.+++..|+|+++.+...   ...-+..||-+++..+|||||.+++.+-.....++.
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            56899999999999999999999999999999999876543   346678999999999999999999999999999999


Q ss_pred             EEecCCCcccchhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           89 MEYVKGGELFGKVA-KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        89 ~E~~~gg~L~~~i~-~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ||||.||+|.+.-. .|.++|.++....+..+.|++|||+.|-+|||||-.|||+++.|.+|++|||.+..+...-.  .
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~--K  168 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA--K  168 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh--h
Confidence            99999999998765 48999999999999999999999999999999999999999999999999999876543221  1


Q ss_pred             cccccCCCcccChhhhc---ccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCC-----CCCCHHH
Q 012021          168 LHTTCGTPAYVAPEVIN---RRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFP-----NWFAPEV  239 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~-----~~~s~~l  239 (472)
                      -..+.|||.|||||+..   ..+|. ..+|||++|++..|+---+.|..+...+.....+.+..+..|     ...++.+
T Consensus       169 rksfiGtpywmapEvaaverkggyn-qlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~f  247 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYN-QLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFF  247 (829)
T ss_pred             hhcccCCccccchhHHHHHhccccc-ccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHH
Confidence            25678999999999863   34554 899999999999999999999877777666656666655544     3478899


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      -+|++.+|..+|++|||++.+|.|||....
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeeccc
Confidence            999999999999999999999999999764


No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00  E-value=8.7e-35  Score=304.75  Aligned_cols=244  Identities=28%  Similarity=0.441  Sum_probs=197.1

Q ss_pred             EEeeEcccCCeE-EEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEEEe
Q 012021           14 LGRLLGQGTFAK-VHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        14 i~~~LG~G~fg~-Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      --+.+|.|+-|+ ||+|..  .|+.||||.+-.+      ..+...+|+..|+..+ |||||++|+.-.+....|+..|.
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL  584 (903)
T ss_pred             cHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence            346789999986 788876  7889999987543      3467889999999884 99999999999999999999999


Q ss_pred             cCCCcccchhccC-C----CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC---CC--CEEEeeccchhhhhc
Q 012021           92 VKGGELFGKVAKG-K----LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE---HG--NLKVSDFGLSALAES  161 (472)
Q Consensus        92 ~~gg~L~~~i~~~-~----l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~---~g--~vkl~DFGla~~~~~  161 (472)
                      |. .+|.++++.. .    ......+.++.|++.||++||+.+|+||||||.||||+.   ++  +++|+|||+++....
T Consensus       585 C~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~  663 (903)
T KOG1027|consen  585 CA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG  663 (903)
T ss_pred             hh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence            94 5899999763 1    111446889999999999999999999999999999976   34  689999999987765


Q ss_pred             ccCC-CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcC-CCCCCCCcHHHHHHHHhccCCCCCCC---CC
Q 012021          162 KHQD-GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAG-YLPFHDSNLMEMYRKIGKAEFKFPNW---FA  236 (472)
Q Consensus       162 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~---~s  236 (472)
                      .... ....+..||-+|+|||++..... +.++|||||||++|+.++| .+||.+.-..  ..+|.++++.+-.-   -.
T Consensus       664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~~~d  740 (903)
T KOG1027|consen  664 GKSSFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLEPLPD  740 (903)
T ss_pred             CcchhhcccCCCCcccccCHHHHhcccc-CcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeeccCch
Confidence            4332 23456779999999999976654 4689999999999998886 9999775332  23555665543211   11


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      .++.+||.+||.++|..||++.++|.||+|-..
T Consensus       741 ~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  741 CEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            289999999999999999999999999999753


No 394
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=2.9e-34  Score=284.78  Aligned_cols=244  Identities=23%  Similarity=0.384  Sum_probs=198.3

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh--cCCCCeeeEEEEEEeCC----
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL--VRHPNVVELYEVMASKT----   83 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~----   83 (472)
                      ...++.+.+|+|.||.||+|..  +++.||||++....      ...+..|-+|.+.  ++|+||++++++-...+    
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence            3567889999999999999986  77999999986543      3567788888775  57999999999876555    


Q ss_pred             EEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhC---------CceecCCCCCcEEEcCCCCEEEeecc
Q 012021           84 KIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSR---------GVCHRDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus        84 ~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~---------giiHrDlKp~NILld~~g~vkl~DFG  154 (472)
                      .++||+||.+.|+|.+++..+.+++....+++..+++||+|||+.         .|+|||||..|||+.+|+...|+|||
T Consensus       282 eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG  361 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG  361 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence            899999999999999999999999999999999999999999964         59999999999999999999999999


Q ss_pred             chhhhhcccCCCccccccCCCcccChhhhcccCCC-----CCcccchhhhHHHHHHhcCC------------CCCC----
Q 012021          155 LSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYD-----GSKADIWSCGVILYVLLAGY------------LPFH----  213 (472)
Q Consensus       155 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-----~~~~DiwSlGvil~~lltG~------------~Pf~----  213 (472)
                      ||..+......+.....+||.+|||||++.+.--.     =.+.||||+|.+|||+++..            +||.    
T Consensus       362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG  441 (534)
T KOG3653|consen  362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG  441 (534)
T ss_pred             eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence            99988877666667778999999999998653211     13689999999999999853            3343    


Q ss_pred             -CCcHHHHHHHH--hccCCCCCCCC-----CHHHHHHHhcccCCCCCCcCChhhhh
Q 012021          214 -DSNLMEMYRKI--GKAEFKFPNWF-----APEVRRLLSKILDPNPNTRISMTKIM  261 (472)
Q Consensus       214 -~~~~~~~~~~i--~~~~~~~~~~~-----s~~l~~li~~~L~~dP~~Rpt~~eil  261 (472)
                       .....++...+  .+.++.+|..+     ...+.+.+..||+.||+.|.|+.=+.
T Consensus       442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~  497 (534)
T KOG3653|consen  442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVE  497 (534)
T ss_pred             CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence             12333333333  34455565432     34688999999999999999986443


No 395
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.4e-33  Score=278.02  Aligned_cols=248  Identities=25%  Similarity=0.476  Sum_probs=197.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHH--hcCCCCeeeEEEEEE----
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMR--LVRHPNVVELYEVMA----   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~--~l~hpnIv~l~~~~~----   80 (472)
                      .+..+-.+.+.||+|-||+||+|++  .|+.||||++....      .....||.+|.+  .|+|+||+.+++.-.    
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g  279 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNG  279 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence            3456788999999999999999988  78999999996543      245678888886  469999999998752    


Q ss_pred             eCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcEEEcCCCCEEEee
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSR--------GVCHRDLKPENLLLDEHGNLKVSD  152 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~--------giiHrDlKp~NILld~~g~vkl~D  152 (472)
                      +.+.+|||++|.+.|+|+|++.+..++-+...+++..+++||++||..        .|.|||||..|||+..||...|+|
T Consensus       280 s~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD  359 (513)
T KOG2052|consen  280 SWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  359 (513)
T ss_pred             ceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence            235799999999999999999999999999999999999999999964        499999999999999999999999


Q ss_pred             ccchhhhhccc--CCCccccccCCCcccChhhhcccC----CCC-CcccchhhhHHHHHHhcC----------CCCCCC-
Q 012021          153 FGLSALAESKH--QDGLLHTTCGTPAYVAPEVINRRG----YDG-SKADIWSCGVILYVLLAG----------YLPFHD-  214 (472)
Q Consensus       153 FGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~----~~~-~~~DiwSlGvil~~lltG----------~~Pf~~-  214 (472)
                      +|||-......  -+-.....+||..|||||++...-    +.+ ..+||||||+|+||++..          .+||.+ 
T Consensus       360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~  439 (513)
T KOG2052|consen  360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV  439 (513)
T ss_pred             ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence            99997655432  223356789999999999985431    222 258999999999999862          578864 


Q ss_pred             ----CcHHHHHHHH--hccCCCCCCCC-CH----HHHHHHhcccCCCCCCcCChhhhhc
Q 012021          215 ----SNLMEMYRKI--GKAEFKFPNWF-AP----EVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       215 ----~~~~~~~~~i--~~~~~~~~~~~-s~----~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                          ++.+++..-+  .+..+.+|.+. +.    .+..+++.||..||..|.|+--|..
T Consensus       440 Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  440 VPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence                3344444332  33455566543 32    3557899999999999999877643


No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.8e-34  Score=266.28  Aligned_cols=255  Identities=26%  Similarity=0.465  Sum_probs=205.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEE-EEeCCE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEV-MASKTK   84 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~-~~~~~~   84 (472)
                      -+.+.|.|.+.||+|-||++.+|+++.+++.+++|.+.+....    ...+.+|...--.| .|.||+.-|++ |++.+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence            4677899999999999999999999999999999999877533    46778888765445 49999998886 678889


Q ss_pred             EEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC--CCCEEEeeccchhhhhcc
Q 012021           85 IYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE--HGNLKVSDFGLSALAESK  162 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~--~g~vkl~DFGla~~~~~~  162 (472)
                      +++++||++-|+|...+...++.|....+++.|+++|++|+|+++++|||||.+||||-.  .-++||||||+.+..+. 
T Consensus        97 YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~-  175 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT-  175 (378)
T ss_pred             EEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc-
Confidence            999999999999999999999999999999999999999999999999999999999932  33799999998775432 


Q ss_pred             cCCCccccccCCCcccChhhhcccC----CCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhcc-CCCCCC
Q 012021          163 HQDGLLHTTCGTPAYVAPEVINRRG----YDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKA-EFKFPN  233 (472)
Q Consensus       163 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~-~~~~~~  233 (472)
                          .....--+..|.+||++....    ...+.+|+|.||+++|.++||.+||.....    ...+.++... ....|.
T Consensus       176 ----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~  251 (378)
T KOG1345|consen  176 ----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK  251 (378)
T ss_pred             ----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence                223334567899999874321    123578999999999999999999985332    2233333332 334443


Q ss_pred             ---CCCHHHHHHHhcccCCCCCCc---CChhhhhcCcccccCC
Q 012021          234 ---WFAPEVRRLLSKILDPNPNTR---ISMTKIMENSWFRKGL  270 (472)
Q Consensus       234 ---~~s~~l~~li~~~L~~dP~~R---pt~~eil~h~~f~~~~  270 (472)
                         .+++.+.++.++-|.++|++|   .++.......|.....
T Consensus       252 ~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i  294 (378)
T KOG1345|consen  252 KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLI  294 (378)
T ss_pred             hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhh
Confidence               378999999999999999999   6777777778876543


No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=2.3e-32  Score=295.37  Aligned_cols=252  Identities=25%  Similarity=0.472  Sum_probs=210.3

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcC-------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLK-------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEV   78 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~   78 (472)
                      +..++..+.+.||+|+||.|++|.-..       ....||||.+......  ...+.+..|+.+|+.+. ||||+.++++
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            344455677899999999999997431       1457999998665433  45678999999999885 9999999999


Q ss_pred             EEeCCEEEEEEEecCCCcccchhccCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 012021           79 MASKTKIYFVMEYVKGGELFGKVAKGK-----------------LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLL  141 (472)
Q Consensus        79 ~~~~~~~~lV~E~~~gg~L~~~i~~~~-----------------l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NIL  141 (472)
                      +...+.+++|+||+..|+|.++++..+                 ++......+++||+.|++||++.+++||||-..|||
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL  450 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence            999999999999999999999997755                 899999999999999999999999999999999999


Q ss_pred             EcCCCCEEEeeccchhhhhcccCCCccccccCCC--cccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCc-H
Q 012021          142 LDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTP--AYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSN-L  217 (472)
Q Consensus       142 ld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~--~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~-~  217 (472)
                      +..+..+||+|||+|+........ ......|+.  .|||||.+....| +.++||||+|++|||+++ |..||.+.. .
T Consensus       451 i~~~~~~kIaDFGlar~~~~~~~y-~~~~~~~~LP~kWmApEsl~~~~f-t~kSDVWSfGI~L~EifsLG~~PYp~~~~~  528 (609)
T KOG0200|consen  451 ITKNKVIKIADFGLARDHYNKDYY-RTKSSAGTLPVKWMAPESLFDRVF-TSKSDVWSFGILLWEIFTLGGTPYPGIPPT  528 (609)
T ss_pred             ecCCCEEEEccccceeccCCCCce-EecCCCCccceeecCHHHhccCcc-cccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence            999999999999999854332211 011222333  3999999988555 489999999999999998 899998855 5


Q ss_pred             HHHHHHHhccC-CCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          218 MEMYRKIGKAE-FKFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       218 ~~~~~~i~~~~-~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+++..+..+. ...|..+++++.++++.||+.+|++||++.++.+
T Consensus       529 ~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  529 EELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            56677676665 4788889999999999999999999999999975


No 398
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00  E-value=2.9e-33  Score=274.84  Aligned_cols=256  Identities=27%  Similarity=0.467  Sum_probs=203.7

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcC---CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEe
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLK---TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMAS   81 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~   81 (472)
                      ..+.+.|.++.+||+|+|+.||+|.+..   .++.||+|.+....     ...++.+|+++|..+. +.||+++.+++..
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn  106 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRN  106 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence            3466789999999999999999999988   78999999986543     2367999999999885 9999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccchhhhh
Q 012021           82 KTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLSALAE  160 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla~~~~  160 (472)
                      +++..+|+||.+..+..++..  .++..+++.|++.++.||.++|.+||+||||||.|+|.+. .+.-.|+|||||...+
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~--~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d  184 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYR--SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD  184 (418)
T ss_pred             CCeeEEEecccCccCHHHHHh--cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHH
Confidence            999999999998877666654  4678899999999999999999999999999999999975 4578999999987221


Q ss_pred             ccc------C-------------------------CCcc-----------ccccCCCcccChhhhcccCCCCCcccchhh
Q 012021          161 SKH------Q-------------------------DGLL-----------HTTCGTPAYVAPEVINRRGYDGSKADIWSC  198 (472)
Q Consensus       161 ~~~------~-------------------------~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  198 (472)
                      ...      .                         .+..           ....||++|.|||++.+.+-.++++||||.
T Consensus       185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~  264 (418)
T KOG1167|consen  185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA  264 (418)
T ss_pred             hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence            110      0                         0000           012499999999999998888899999999


Q ss_pred             hHHHHHHhcCCCCCCCCc-----HHHHHHHH------------hc---------------------c--------CC---
Q 012021          199 GVILYVLLAGYLPFHDSN-----LMEMYRKI------------GK---------------------A--------EF---  229 (472)
Q Consensus       199 Gvil~~lltG~~Pf~~~~-----~~~~~~~i------------~~---------------------~--------~~---  229 (472)
                      |+|+..++++..||....     ..++..-.            .+                     .        ..   
T Consensus       265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~  344 (418)
T KOG1167|consen  265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT  344 (418)
T ss_pred             cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence            999999999999985321     11110000            00                     0        00   


Q ss_pred             CC---CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          230 KF---PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       230 ~~---~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ..   ...++..+.+|+.+||+.||.+|.|+++.|.||||..
T Consensus       345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             eeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence            00   0114568899999999999999999999999999974


No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98  E-value=2e-31  Score=246.09  Aligned_cols=212  Identities=47%  Similarity=0.831  Sum_probs=186.5

Q ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcc
Q 012021           18 LGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGEL   97 (472)
Q Consensus        18 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L   97 (472)
                      ||+|++|.||++.+..+++.+++|++.......  ..+.+.+|+.+++.++|++|+++++++......++++||+.|++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999998889999999997664321  346789999999999999999999999999999999999999999


Q ss_pred             cchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-CCCEEEeeccchhhhhcccCCCccccccCC
Q 012021           98 FGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-HGNLKVSDFGLSALAESKHQDGLLHTTCGT  174 (472)
Q Consensus        98 ~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-~g~vkl~DFGla~~~~~~~~~~~~~~~~gt  174 (472)
                      .+++...  .++...++.++.+++.++.+||++|++|+||+|.||+++. ++.++|+|||.+........  ......++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~  156 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGT  156 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCC
Confidence            9998765  7999999999999999999999999999999999999999 89999999999876543221  12345678


Q ss_pred             CcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCc
Q 012021          175 PAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTR  254 (472)
Q Consensus       175 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~R  254 (472)
                      ..|++||.+......+.++|+|++|++++++                               ..+.+++.+|+..||++|
T Consensus       157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R  205 (215)
T cd00180         157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKR  205 (215)
T ss_pred             CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccC
Confidence            8999999987653445889999999999999                               678999999999999999


Q ss_pred             CChhhhhcCc
Q 012021          255 ISMTKIMENS  264 (472)
Q Consensus       255 pt~~eil~h~  264 (472)
                      |++.++++++
T Consensus       206 ~~~~~l~~~~  215 (215)
T cd00180         206 PSAKEILEHL  215 (215)
T ss_pred             cCHHHHhhCC
Confidence            9999999874


No 400
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98  E-value=2.1e-32  Score=245.85  Aligned_cols=211  Identities=25%  Similarity=0.466  Sum_probs=170.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL-VRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ...-+..||+|+||.|-+.++..+|...|+|.+...-.  ....+++.+|+++..+ ..+|.+|.+||.+..+..+++.|
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            34456789999999999999999999999999965432  3445677788887654 57999999999999999999999


Q ss_pred             EecCCCcccch----hcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           90 EYVKGGELFGK----VAK-GKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        90 E~~~gg~L~~~----i~~-~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      |.+.. +|..+    +.. +.++|..+-+++-.++.||.|||++ .++|||+||.|||++.+|++|+||||++......-
T Consensus       125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            99954 55332    233 5799999999999999999999987 89999999999999999999999999987554321


Q ss_pred             CCCccccccCCCcccChhhhc----ccCCCCCcccchhhhHHHHHHhcCCCCCCC-CcHHHHHHHHhccC
Q 012021          164 QDGLLHTTCGTPAYVAPEVIN----RRGYDGSKADIWSCGVILYVLLAGYLPFHD-SNLMEMYRKIGKAE  228 (472)
Q Consensus       164 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DiwSlGvil~~lltG~~Pf~~-~~~~~~~~~i~~~~  228 (472)
                      .   .+...|...|||||.+.    ..+|+ -++||||||++++||.+++.||+. ..+.++..++....
T Consensus       204 A---kt~daGCkpYmaPEri~~e~n~~gY~-vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  204 A---KTMDAGCKPYMAPERINPELNQKGYS-VKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP  269 (282)
T ss_pred             H---HHHhcCCCccCChhhcCcccCcccce-eehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence            1   12256889999999874    33665 799999999999999999999976 34556666665543


No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97  E-value=5.9e-31  Score=247.51  Aligned_cols=218  Identities=43%  Similarity=0.718  Sum_probs=186.4

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      |++.+.||.|++|.||++.+..+++.+|+|.+......  ...+.+.+|+..++.++|+|++++++++...+..++++||
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            67899999999999999999888999999999765432  2467889999999999999999999999999999999999


Q ss_pred             cCCCcccchhccC-C-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccc
Q 012021           92 VKGGELFGKVAKG-K-LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLH  169 (472)
Q Consensus        92 ~~gg~L~~~i~~~-~-l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~  169 (472)
                      +.+++|.+++... . +++..+..++.+++.++.+||++|++|+||+|.||+++.++.++|+|||++........ ....
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~  157 (225)
T smart00221       79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALLK  157 (225)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-cccc
Confidence            9999999998763 4 89999999999999999999999999999999999999999999999999887654321 1224


Q ss_pred             cccCCCcccChhhh-cccCCCCCcccchhhhHHHHHHhcCCCCCCC--CcHHHHHHHHhccCCCCCC
Q 012021          170 TTCGTPAYVAPEVI-NRRGYDGSKADIWSCGVILYVLLAGYLPFHD--SNLMEMYRKIGKAEFKFPN  233 (472)
Q Consensus       170 ~~~gt~~y~aPE~~-~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~--~~~~~~~~~i~~~~~~~~~  233 (472)
                      ...++..|++||.+ ....+. .++|+|+||+++++|++|+.||..  .+...+.+.+..+.....+
T Consensus       158 ~~~~~~~~~~pe~~~~~~~~~-~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  223 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKGYG-EAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPLLWE  223 (225)
T ss_pred             ceeccCCcCCHhHhcCCCCCC-chhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCccccc
Confidence            45788899999998 444444 689999999999999999999977  3444777777777654443


No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97  E-value=3.9e-32  Score=283.26  Aligned_cols=247  Identities=23%  Similarity=0.350  Sum_probs=210.8

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCc----EEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGM----SVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      .+-++.||.|+||+||++.+...|+    +||||++......  +....+.+|+-+|..++|||+++|++++.... +-|
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql  774 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL  774 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence            3456889999999999999987776    5888888655432  34577889999999999999999999997766 889


Q ss_pred             EEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCC
Q 012021           88 VMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~  165 (472)
                      |++|+++|.|.++++.  +.+.....+.|..||+.|+.|||.++++||||-..|+|+.+-..+||.|||+|.+.......
T Consensus       775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence            9999999999999864  67999999999999999999999999999999999999999999999999999987664433


Q ss_pred             CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHH
Q 012021          166 GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLL  243 (472)
Q Consensus       166 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li  243 (472)
                      -......-.+.|||=|.+....|. .++||||+||++||++| |..|+.+....++-..+..+ +...|+.++-++.-++
T Consensus       855 y~~~~gK~pikwmale~i~~~~~t-hqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~m  933 (1177)
T KOG1025|consen  855 YSAPGGKVPIKWMALESIRIRKYT-HQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVM  933 (1177)
T ss_pred             ccccccccCcHHHHHHHhhccCCC-chhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHH
Confidence            222222234568999988777765 89999999999999998 99999998888777766655 3678888999999999


Q ss_pred             hcccCCCCCCcCChhhhhc
Q 012021          244 SKILDPNPNTRISMTKIME  262 (472)
Q Consensus       244 ~~~L~~dP~~Rpt~~eil~  262 (472)
                      .+||..|+..||+++++.+
T Consensus       934 vkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  934 VKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HHHhccCcccCccHHHHHH
Confidence            9999999999999998754


No 403
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=1.2e-31  Score=286.99  Aligned_cols=260  Identities=29%  Similarity=0.505  Sum_probs=211.4

Q ss_pred             cCCe-EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecc---cccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021            9 MQRY-ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKE---KVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus         9 ~~~y-~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~---~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ...| .-...+|.|++|.|+.+......+.++.|.+...   ..........+..|+.+-..++|||++.....+.+...
T Consensus       316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence            3445 4678899999999999988888887887766421   11111222337778888889999999887777766666


Q ss_pred             EEEEEEecCCCcccchhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhccc
Q 012021           85 IYFVMEYVKGGELFGKVAKG-KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKH  163 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~~-~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~  163 (472)
                      ++.+||||++ +|+..+... .++..++..++.||+.||+|+|+.||.|||+||+|+++..+|.+||+|||.+.......
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            6666999999 999999875 89999999999999999999999999999999999999999999999999998877665


Q ss_pred             CC--CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHH--HHHHhc-------cCCCCC
Q 012021          164 QD--GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEM--YRKIGK-------AEFKFP  232 (472)
Q Consensus       164 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~--~~~i~~-------~~~~~~  232 (472)
                      ..  ......+|+..|+|||++.+..|+....||||+|++++.|.+|+.||......+.  +.....       +...+-
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~  554 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLL  554 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHH
Confidence            54  4566789999999999999999999999999999999999999999976543322  111111       111222


Q ss_pred             CCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          233 NWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       233 ~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ..++.+.+.+|.+||++||.+|.|+++|++.+||+..
T Consensus       555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  555 SLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            3367788999999999999999999999999999864


No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96  E-value=1.3e-30  Score=291.17  Aligned_cols=199  Identities=17%  Similarity=0.230  Sum_probs=146.8

Q ss_pred             hcCC-CCeeeEEEEE-------EeCCEEEEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 012021           66 LVRH-PNVVELYEVM-------ASKTKIYFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDL  135 (472)
Q Consensus        66 ~l~h-pnIv~l~~~~-------~~~~~~~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDl  135 (472)
                      .++| +||++++++|       .....+++++||+ +++|++++..  +.+++.+++.+++||+.||.|||++||+||||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            4455 5778888877       2334677888987 6699999965  46999999999999999999999999999999


Q ss_pred             CCCcEEEcC-------------------CCCEEEeeccchhhhhcccC---------C-----CccccccCCCcccChhh
Q 012021          136 KPENLLLDE-------------------HGNLKVSDFGLSALAESKHQ---------D-----GLLHTTCGTPAYVAPEV  182 (472)
Q Consensus       136 Kp~NILld~-------------------~g~vkl~DFGla~~~~~~~~---------~-----~~~~~~~gt~~y~aPE~  182 (472)
                      ||+||||+.                   ++.+|++|||+++.......         .     ......+||+.|+|||+
T Consensus       107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  186 (793)
T PLN00181        107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE  186 (793)
T ss_pred             CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence            999999954                   44566666666653211000         0     00112468999999999


Q ss_pred             hcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-CCCCCCCHHHHHHHhcccCCCCCCcCChhhhh
Q 012021          183 INRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-KFPNWFAPEVRRLLSKILDPNPNTRISMTKIM  261 (472)
Q Consensus       183 ~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil  261 (472)
                      +.+..| +.++|||||||+||||++|..|+.....  ....+..... ..+....+...+++.+||.++|.+|||+.|++
T Consensus       187 ~~~~~~-~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        187 DNGSSS-NCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             hccCCC-CchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHh
Confidence            988777 4899999999999999999998764321  1111111111 11111245678899999999999999999999


Q ss_pred             cCccccc
Q 012021          262 ENSWFRK  268 (472)
Q Consensus       262 ~h~~f~~  268 (472)
                      +||||.+
T Consensus       264 ~h~~~~~  270 (793)
T PLN00181        264 QSEFINE  270 (793)
T ss_pred             hchhhhh
Confidence            9999975


No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.96  E-value=3.7e-27  Score=230.34  Aligned_cols=255  Identities=36%  Similarity=0.609  Sum_probs=213.0

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCC-CeeeEEEEEEeCCEEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHP-NVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp-nIv~l~~~~~~~~~~~lV~E   90 (472)
                      |.+.+.||.|+||.||.+.+.   ..+|+|.+.............+.+|+.+++.+.|+ +|+++++++......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            889999999999999999986   88999999877655433567899999999999988 79999999988888999999


Q ss_pred             ecCCCcccchhccC----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-CEEEeeccchhhhhcccCC
Q 012021           91 YVKGGELFGKVAKG----KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-NLKVSDFGLSALAESKHQD  165 (472)
Q Consensus        91 ~~~gg~L~~~i~~~----~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-~vkl~DFGla~~~~~~~~~  165 (472)
                      ++.++++.+.+...    .+++..+..++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||++.........
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            99999999777654    699999999999999999999999999999999999999999 6999999998755433222


Q ss_pred             C----ccccccCCCcccChhhhccc--CCCCCcccchhhhHHHHHHhcCCCCCCCCcH----HHHHHHHhccCCC-CCCC
Q 012021          166 G----LLHTTCGTPAYVAPEVINRR--GYDGSKADIWSCGVILYVLLAGYLPFHDSNL----MEMYRKIGKAEFK-FPNW  234 (472)
Q Consensus       166 ~----~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~----~~~~~~i~~~~~~-~~~~  234 (472)
                      .    .....+||+.|+|||.+.+.  .......|+||+|++++++++|..||.....    ......+...... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence            1    34677899999999999774  4556899999999999999999999887663    4555555544433 2222


Q ss_pred             CC--------HHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          235 FA--------PEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       235 ~s--------~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      ..        ..+.+++.+++..+|..|.+..+...++|....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            22        478999999999999999999999988766543


No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95  E-value=8.1e-28  Score=242.70  Aligned_cols=172  Identities=24%  Similarity=0.248  Sum_probs=136.8

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEcC-CCcEEEEEEeecccc--cchhhHHHHHHHHHHHHhcCCCCeee-EEEEEE
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNLK-TGMSVAIKIIDKEKV--LKVGMIDQIKREISVMRLVRHPNVVE-LYEVMA   80 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~hpnIv~-l~~~~~   80 (472)
                      -..+.++|++.+.||+|+||+||+|++.. +++.||||.+.....  ........+.+|+.+|+.++|+|++. ++++  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            35788999999999999999999999876 678889998753311  12234567999999999999999985 5442  


Q ss_pred             eCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEcCCCCEEEeeccchhhh
Q 012021           81 SKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDL-KPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDl-Kp~NILld~~g~vkl~DFGla~~~  159 (472)
                        +..|+||||++|++|... ..  ..   ...++.|++.+|.|||++||+|||| ||+|||++.++++||+|||+|+..
T Consensus        91 --~~~~LVmE~~~G~~L~~~-~~--~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~  162 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHLA-RP--HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF  162 (365)
T ss_pred             --CCcEEEEEccCCCCHHHh-Cc--cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence              458999999999999632 21  11   1468899999999999999999999 999999999999999999999876


Q ss_pred             hcccCCCc------cccccCCCcccChhhhccc
Q 012021          160 ESKHQDGL------LHTTCGTPAYVAPEVINRR  186 (472)
Q Consensus       160 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~  186 (472)
                      ........      +.+.++++.|+|||.+...
T Consensus       163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             ccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            54332222      2466789999999998543


No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95  E-value=3.2e-28  Score=236.51  Aligned_cols=253  Identities=20%  Similarity=0.283  Sum_probs=208.5

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEE-E
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKT-----GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVM-A   80 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~   80 (472)
                      +-..|+++.-.+-+|+||.||.|++++.     .+.|-+|.+....  ..-....+..|-..+..+.|||+..+.++. +
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~ie  358 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSIE  358 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence            4456889999999999999999977643     2345566553322  123356677888889999999999999987 4


Q ss_pred             eCCEEEEEEEecCCCcccchhc-----c----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEe
Q 012021           81 SKTKIYFVMEYVKGGELFGKVA-----K----GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVS  151 (472)
Q Consensus        81 ~~~~~~lV~E~~~gg~L~~~i~-----~----~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~  151 (472)
                      +.+..++++.+..-|+|..++.     .    ..++-.+...++.|++.|++|||++||+|.||...|.+||+.-++||+
T Consensus       359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt  438 (563)
T KOG1024|consen  359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT  438 (563)
T ss_pred             ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence            5567888999998899988775     1    246777888999999999999999999999999999999999999999


Q ss_pred             eccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC-C
Q 012021          152 DFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE-F  229 (472)
Q Consensus       152 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~-~  229 (472)
                      |=.|++-....+.+.+-........||+||.+....|. .++|+|||||+||||+| |+.|+-+.++.+++..++.+. .
T Consensus       439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ys-sasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl  517 (563)
T KOG1024|consen  439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYS-SASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL  517 (563)
T ss_pred             cchhccccCcccccccCCCCCCcccccCHHHHhhhhhc-chhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee
Confidence            99998865544433333333345679999999988886 78999999999999998 999999999999998888774 5


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .-|-.+++++..++.-||..+|++||+.+|+..
T Consensus       518 aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  518 AQPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            667789999999999999999999999999864


No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95  E-value=3.8e-28  Score=221.54  Aligned_cols=158  Identities=22%  Similarity=0.264  Sum_probs=127.9

Q ss_pred             Ccccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCcccccc
Q 012021           95 GELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTC  172 (472)
Q Consensus        95 g~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~  172 (472)
                      |+|.+++..  +.+++.+++.++.||+.||.|||+++      ||+|||++.++.+|+  ||++......       ...
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-------~~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-------QSR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-------cCC
Confidence            678888864  46999999999999999999999999      999999999999999  9988765331       236


Q ss_pred             CCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHH-HHHHHHhccCCCC-------CCCCCH--HHHHH
Q 012021          173 GTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLM-EMYRKIGKAEFKF-------PNWFAP--EVRRL  242 (472)
Q Consensus       173 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~-~~~~~i~~~~~~~-------~~~~s~--~l~~l  242 (472)
                      ||+.|+|||++.+..+. .++|||||||++|+|++|+.||...... ..+..+.......       +..++.  ++.++
T Consensus        66 g~~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (176)
T smart00750       66 VDPYFMAPEVIQGQSYT-EKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF  144 (176)
T ss_pred             CcccccChHHhcCCCCc-chhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence            89999999999887775 7999999999999999999999765432 3333332221111       122333  69999


Q ss_pred             HhcccCCCCCCcCChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      |.+||..||.+|||+.++++|+|+..
T Consensus       145 i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      145 MRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHHhcccccccCHHHHHHHHHHHH
Confidence            99999999999999999999999863


No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95  E-value=1.1e-26  Score=233.32  Aligned_cols=248  Identities=25%  Similarity=0.331  Sum_probs=195.9

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCC-cEEEEEEeecccccchhhHHHHHHHHHHHHhcCC----CCeeeEEEEE-EeCCE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTG-MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH----PNVVELYEVM-ASKTK   84 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g-~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h----pnIv~l~~~~-~~~~~   84 (472)
                      +|.+.+.||+|+||.||++.+..++ ..+|+|+.........   ..++.|..++..+..    +++..+++.. ..+..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            8999999999999999999998774 6899999866532211   267889999988873    6999999999 58889


Q ss_pred             EEEEEEecCCCcccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC-----CCEEEeeccch
Q 012021           85 IYFVMEYVKGGELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH-----GNLKVSDFGLS  156 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~-----g~vkl~DFGla  156 (472)
                      .|+||+.+ |.+|.++...   +.++...+.+++.|++.+|+++|+.|++||||||+|++++..     ..+.|.|||+|
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99999998 8889887642   679999999999999999999999999999999999999865     35999999999


Q ss_pred             hhhh--cccC-----CCc-cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhc--
Q 012021          157 ALAE--SKHQ-----DGL-LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGK--  226 (472)
Q Consensus       157 ~~~~--~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~--  226 (472)
                      +...  ....     ... .....||..|+++.+..+... +.+.|+||++.++.+++.|.+||..........++..  
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~-~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~  253 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQ-GRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP  253 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCcc-CCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence            8332  1111     111 123459999999999887766 4899999999999999999999977553222222222  


Q ss_pred             -cCCC--CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          227 -AEFK--FPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       227 -~~~~--~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                       ....  +....+.++..+...+-..+...+|.+..+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence             1111  233356778888888888999999999988765


No 410
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95  E-value=9.4e-29  Score=254.28  Aligned_cols=238  Identities=34%  Similarity=0.611  Sum_probs=207.9

Q ss_pred             eEcccCCeEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEEEec
Q 012021           17 LLGQGTFAKVHYARNL---KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~   92 (472)
                      .+|+|+||+|++++..   ..|..+|+|+..+...... ....-+.|..++..++ ||.+|+++..+.++++.|+++++.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~-~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR-DRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccc-cccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            4799999999987644   3678899999877654322 1225566888888887 999999999999999999999999


Q ss_pred             CCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccc
Q 012021           93 KGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTT  171 (472)
Q Consensus        93 ~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~  171 (472)
                      .||+|+..+.. ..+.+.....+...++-+++++|+.||+|||+|++||+++.+|.+++.|||+++..-...      ..
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~------~~  153 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK------IA  153 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh------hc
Confidence            99999988876 568899999999999999999999999999999999999999999999999998664322      22


Q ss_pred             cCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCC
Q 012021          172 CGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNP  251 (472)
Q Consensus       172 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP  251 (472)
                      |||..|||||++.  +.. ..+|.||+|+++|+|+||..||..    +....|.+..+..|..++.++++++..++..+|
T Consensus       154 cgt~eymApEI~~--gh~-~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p  226 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN--GHL-SAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNP  226 (612)
T ss_pred             ccchhhhhhHhhh--ccC-CcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCH
Confidence            9999999999997  444 689999999999999999999988    677788889999999999999999999999999


Q ss_pred             CCcCCh-----hhhhcCccccc
Q 012021          252 NTRISM-----TKIMENSWFRK  268 (472)
Q Consensus       252 ~~Rpt~-----~eil~h~~f~~  268 (472)
                      ..|...     .+|++|+||+.
T Consensus       227 ~nrLg~~~~~~~eik~h~f~~~  248 (612)
T KOG0603|consen  227 ENRLGAGPDGVDEIKQHEFFQS  248 (612)
T ss_pred             HHHhccCcchhHHHhccchhee
Confidence            999864     69999999986


No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95  E-value=6.1e-27  Score=215.07  Aligned_cols=250  Identities=22%  Similarity=0.299  Sum_probs=203.8

Q ss_pred             cCCcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC-CCeeeEEEEEEeC
Q 012021            4 KGSILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH-PNVVELYEVMASK   82 (472)
Q Consensus         4 ~g~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~~~   82 (472)
                      +..+..++|.++++||.|+||.+|+|.+..+|+.||||+-......     .++..|..+.+.|++ ..|..+..+..+.
T Consensus         9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen    9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEK   83 (341)
T ss_pred             hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhcccc
Confidence            3457788999999999999999999999999999999997554322     467789999999974 7888888889999


Q ss_pred             CEEEEEEEecCCCcccchhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC---CEEEeeccchh
Q 012021           83 TKIYFVMEYVKGGELFGKVA--KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG---NLKVSDFGLSA  157 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~--~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g---~vkl~DFGla~  157 (472)
                      .+-.+||+.. |.+|.++..  ...++..+++-++-|++.-++|+|.++++||||||+|+|..-+-   .+.++|||||+
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence            9999999998 778988875  36899999999999999999999999999999999999986443   58999999999


Q ss_pred             hhhcccCCC-----ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCc---HHHHHHHHhccCC
Q 012021          158 LAESKHQDG-----LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSN---LMEMYRKIGKAEF  229 (472)
Q Consensus       158 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~---~~~~~~~i~~~~~  229 (472)
                      .+.......     .-....||..|.+-....+... +.+.|+-|+|.+|.++.-|.+||.+..   ...-|++|..-..
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eq-SRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~  241 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQ-SRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM  241 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhh-hhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc
Confidence            775543321     1233469999999887766554 478999999999999999999998743   3455666765554


Q ss_pred             CC-----CCCCCHHHHHHHhcccCCCCCCcCChhhh
Q 012021          230 KF-----PNWFAPEVRRLLSKILDPNPNTRISMTKI  260 (472)
Q Consensus       230 ~~-----~~~~s~~l~~li~~~L~~dP~~Rpt~~ei  260 (472)
                      ..     ...+|.|+.-.+.-|-..--++-|+..-+
T Consensus       242 s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~yl  277 (341)
T KOG1163|consen  242 STPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYL  277 (341)
T ss_pred             CCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHH
Confidence            43     35688899999988877777777876544


No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94  E-value=1.8e-26  Score=220.52  Aligned_cols=247  Identities=20%  Similarity=0.347  Sum_probs=205.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKI   85 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~   85 (472)
                      ++.-.|+++++||+|+||..+.+.+..++++||||.-....     .+.+++.|....+.|. .++|...|.+...+-+-
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N   99 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN   99 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence            44448999999999999999999999999999999865432     3468999999999986 69999999999888899


Q ss_pred             EEEEEecCCCcccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC-----CEEEeeccchhh
Q 012021           86 YFVMEYVKGGELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG-----NLKVSDFGLSAL  158 (472)
Q Consensus        86 ~lV~E~~~gg~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g-----~vkl~DFGla~~  158 (472)
                      .||||++ |-+|.|+..-  ++|+...+..++.|++.-++|+|++.+|+|||||+|+||..-+     .|.|+|||+|+.
T Consensus       100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            9999998 7788888764  5799999999999999999999999999999999999997654     489999999998


Q ss_pred             hhcccCCC-----ccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCC---CcHHHHHHHHhccCCC
Q 012021          159 AESKHQDG-----LLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHD---SNLMEMYRKIGKAEFK  230 (472)
Q Consensus       159 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~---~~~~~~~~~i~~~~~~  230 (472)
                      +.......     .-....||..||+-....+...+ .+.|+-|||-+++++|-|.+||.+   .+..+-|++|....-.
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQS-RRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~  257 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQS-RRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS  257 (449)
T ss_pred             hcCccccccCccccccccccceeeeEeeccccchhh-hhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence            76543321     22345699999999888887765 889999999999999999999986   4566788888765433


Q ss_pred             C-----CCCCCHHHHHHHhcccCCCCCCcCChhhh
Q 012021          231 F-----PNWFAPEVRRLLSKILDPNPNTRISMTKI  260 (472)
Q Consensus       231 ~-----~~~~s~~l~~li~~~L~~dP~~Rpt~~ei  260 (472)
                      -     ...++.++...++-.-..+-.+-|+++-+
T Consensus       258 T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdyl  292 (449)
T KOG1165|consen  258 TPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYL  292 (449)
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHH
Confidence            2     34577788877776666666777777644


No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.92  E-value=5.3e-25  Score=207.79  Aligned_cols=176  Identities=16%  Similarity=0.218  Sum_probs=138.4

Q ss_pred             CcccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHH------HHHHHHHHHhcCCCCeeeEEEEE
Q 012021            6 SILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQ------IKREISVMRLVRHPNVVELYEVM   79 (472)
Q Consensus         6 ~~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~------~~~Ei~il~~l~hpnIv~l~~~~   79 (472)
                      .++.++|++.+.||.|+||.||++.+  ++..+|+|++.............      +.+|+..+.++.||+|..+.+++
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            36889999999999999999999765  57789999997665444443333      68999999999999999999886


Q ss_pred             EeC--------CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEe
Q 012021           80 ASK--------TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVS  151 (472)
Q Consensus        80 ~~~--------~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~  151 (472)
                      ...        +..+++|||++|.+|.+..   .+++.    ...+++.++..||++|++|||+||.||+++.+| ++|+
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~---~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~li  176 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP---EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRII  176 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHHHhh---hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEE
Confidence            533        3589999999999997763   23332    456999999999999999999999999999998 9999


Q ss_pred             eccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHh
Q 012021          152 DFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLL  206 (472)
Q Consensus       152 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~ll  206 (472)
                      |||..........              .........|. .++|+||||+++..+.
T Consensus       177 Dfg~~~~~~e~~a--------------~d~~vler~y~-~~~di~~lg~~~~~~~  216 (232)
T PRK10359        177 DLSGKRCTAQRKA--------------KDRIDLERHYG-IKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ECCCcccccchhh--------------HHHHHHHhHhc-ccccccceeEeehHHH
Confidence            9997654322111              01133445566 7899999999987654


No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91  E-value=3.2e-24  Score=198.95  Aligned_cols=142  Identities=20%  Similarity=0.253  Sum_probs=113.3

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchh-----------------------hHHHHHHHHHHHHhcCCCC
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVG-----------------------MIDQIKREISVMRLVRHPN   71 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~-----------------------~~~~~~~Ei~il~~l~hpn   71 (472)
                      ...||+|+||.||+|.+. +|+.||||++.........                       ......+|+.+++.+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999986 8999999999765321111                       0123456999999998887


Q ss_pred             eeeEEEEEEeCCEEEEEEEecCCCcccch-hccCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEEEcCCCCEE
Q 012021           72 VVELYEVMASKTKIYFVMEYVKGGELFGK-VAKGKLKEDAARKYFQQLISAVDYC-HSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        72 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~-i~~~~l~e~~~~~i~~ql~~aL~yL-H~~giiHrDlKp~NILld~~g~vk  149 (472)
                      +.....+....  .|+||||+.|+++... +..+++++..+..++.|++.+|.|+ |+.||+||||||+|||++ ++.++
T Consensus        81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence            75544433222  3899999999877655 4557899999999999999999999 799999999999999998 57899


Q ss_pred             Eeeccchhhhh
Q 012021          150 VSDFGLSALAE  160 (472)
Q Consensus       150 l~DFGla~~~~  160 (472)
                      |+|||+|....
T Consensus       158 LiDFG~a~~~~  168 (190)
T cd05147         158 IIDVSQSVEHD  168 (190)
T ss_pred             EEEccccccCC
Confidence            99999987543


No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.91  E-value=1.1e-24  Score=234.23  Aligned_cols=220  Identities=32%  Similarity=0.640  Sum_probs=175.8

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      .-..|+.++++..|+||.||+++++.+.+.+|+| ++++...       +++   |+.....|.+|              
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li-------lRn---ilt~a~npfvv--------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI-------LRN---ILTFAGNPFVV--------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh-------hhc---cccccCCccee--------------
Confidence            3457999999999999999999999999999994 4544321       111   44444455544              


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC--
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ--  164 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~--  164 (472)
                             |+-...++. |.++.+.        +.+++|||+-||+|||+||+|+||..-|++|+.|||++...-....  
T Consensus       136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn  200 (1205)
T KOG0606|consen  136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN  200 (1205)
T ss_pred             -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence                   333334433 5565554        7799999999999999999999999999999999999864321110  


Q ss_pred             -----------CCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCCCCCC
Q 012021          165 -----------DGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEFKFPN  233 (472)
Q Consensus       165 -----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~~~~~  233 (472)
                                 .-.-...||||.|+|||++...+|- ..+|+|++|+|+|+++-|..||.++..++++..+......+|.
T Consensus       201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgyg-kpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE  279 (1205)
T KOG0606|consen  201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYG-KPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE  279 (1205)
T ss_pred             hhhcchHHHHHHhhhccccCCccccChhhhhhhccC-CCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence                       0112345999999999999999985 8899999999999999999999999999999999888777765


Q ss_pred             C---CCHHHHHHHhcccCCCCCCcC---ChhhhhcCccccc
Q 012021          234 W---FAPEVRRLLSKILDPNPNTRI---SMTKIMENSWFRK  268 (472)
Q Consensus       234 ~---~s~~l~~li~~~L~~dP~~Rp---t~~eil~h~~f~~  268 (472)
                      .   ++++++++|.++|+.+|..|.   ..-++.+|+||+.
T Consensus       280 ~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~  320 (1205)
T KOG0606|consen  280 EDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQL  320 (1205)
T ss_pred             cCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceee
Confidence            4   789999999999999999996   4568889999985


No 416
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91  E-value=3.9e-25  Score=236.98  Aligned_cols=259  Identities=32%  Similarity=0.561  Sum_probs=220.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcC-CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLK-TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIY   86 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~   86 (472)
                      ...|.+.+.||+|+|+.|-++.+.. +...+|+|.+.... ......+.+..|..+-+.+. |+|++.+++........+
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            5679999999999999998888754 44567777775543 23345677788999988887 999999999999999999


Q ss_pred             EEEEecCCCcccchh-ccC--CCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEcCCC-CEEEeeccchhhhhc
Q 012021           87 FVMEYVKGGELFGKV-AKG--KLKEDAARKYFQQLISAVDYCH-SRGVCHRDLKPENLLLDEHG-NLKVSDFGLSALAES  161 (472)
Q Consensus        87 lV~E~~~gg~L~~~i-~~~--~l~e~~~~~i~~ql~~aL~yLH-~~giiHrDlKp~NILld~~g-~vkl~DFGla~~~~~  161 (472)
                      ++++|..|+++++.+ ...  ..+...+..++.|+..++.|+| ..++.||||||+|.+++.++ +++++|||+|..+..
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999999999 653  6888899999999999999999 99999999999999999999 999999999998877


Q ss_pred             -ccCCCccccccC-CCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHH-HHHHHhcc--C--CCCCCC
Q 012021          162 -KHQDGLLHTTCG-TPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLME-MYRKIGKA--E--FKFPNW  234 (472)
Q Consensus       162 -~~~~~~~~~~~g-t~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~-~~~~i~~~--~--~~~~~~  234 (472)
                       ..........|| ++.|+|||.+.+..|.+...|+||+|+++..+++|..||....... .+..+...  .  ......
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS  257 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence             566667788899 9999999999988888899999999999999999999998755432 22222222  2  222334


Q ss_pred             CCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          235 FAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       235 ~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ++....+++.++|..+|..|.+.+++..++|+..
T Consensus       258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  258 ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             CChhhhhcccccccCCchhccccccccccccccc
Confidence            7889999999999999999999999999999987


No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90  E-value=2.2e-23  Score=193.48  Aligned_cols=143  Identities=19%  Similarity=0.254  Sum_probs=116.0

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch-----------------------hhHHHHHHHHHHHHhcCCC
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV-----------------------GMIDQIKREISVMRLVRHP   70 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-----------------------~~~~~~~~Ei~il~~l~hp   70 (472)
                      +.+.||+|+||.||+|.+. +|+.||||+++.......                       .......+|+..+.++.|+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            3578999999999999987 899999999986531100                       0123356899999999999


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCCCcccc-hhccCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCE
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKGGELFG-KVAKGKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~-~i~~~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~v  148 (472)
                      ++.....+....  .|+||||++|+++.. .+..+++++..+..++.|++.++.++|+ +||+||||||+|||++ ++.+
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~  156 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP  156 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence            886555544333  489999999885543 3556788999999999999999999999 9999999999999999 8899


Q ss_pred             EEeeccchhhhh
Q 012021          149 KVSDFGLSALAE  160 (472)
Q Consensus       149 kl~DFGla~~~~  160 (472)
                      +|+|||+|....
T Consensus       157 ~liDFG~a~~~~  168 (190)
T cd05145         157 YIIDVSQAVELD  168 (190)
T ss_pred             EEEEcccceecC
Confidence            999999987654


No 418
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89  E-value=1.5e-23  Score=203.68  Aligned_cols=234  Identities=26%  Similarity=0.360  Sum_probs=151.6

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC----------CCCeeeEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR----------HPNVVELYEVMA   80 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~----------hpnIv~l~~~~~   80 (472)
                      .+..++.||.|+++.||.+.|..||+.+|+|++...........+.+++|.-....+.          |-.++..++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            3567889999999999999999999999999987655444455677777765544432          223333333321


Q ss_pred             ---------eC---CE-----EEEEEEecCCCcccchhcc----CCC----CHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 012021           81 ---------SK---TK-----IYFVMEYVKGGELFGKVAK----GKL----KEDAARKYFQQLISAVDYCHSRGVCHRDL  135 (472)
Q Consensus        81 ---------~~---~~-----~~lV~E~~~gg~L~~~i~~----~~l----~e~~~~~i~~ql~~aL~yLH~~giiHrDl  135 (472)
                               ..   +.     .+++|+-+ .++|.+.+.-    ...    .......+..|++..+++||+.|++|+||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                     11   12     35677766 4467665431    222    12223445589999999999999999999


Q ss_pred             CCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccC-------CCCCcccchhhhHHHHHHhcC
Q 012021          136 KPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRG-------YDGSKADIWSCGVILYVLLAG  208 (472)
Q Consensus       136 Kp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~~DiwSlGvil~~lltG  208 (472)
                      +|+|++++.+|.+.|+||+.....+....     ....+..|.+||......       ..+.+.|.|+||+++|.|+||
T Consensus       172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~  246 (288)
T PF14531_consen  172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG  246 (288)
T ss_dssp             SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred             ceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence            99999999999999999987665443221     134457899999875431       124788999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCc
Q 012021          209 YLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTR  254 (472)
Q Consensus       209 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~R  254 (472)
                      .+||..........    ..+.....++..++.||..+|++||.+|
T Consensus       247 ~lPf~~~~~~~~~~----~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  247 RLPFGLSSPEADPE----WDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             S-STCCCGGGSTSG----GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             cCCCCCCCcccccc----ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence            99998654432111    0233333688999999999999999988


No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89  E-value=7e-23  Score=189.78  Aligned_cols=192  Identities=19%  Similarity=0.252  Sum_probs=145.1

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhh-HHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGM-IDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~-~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      ..+...|+.|+||+||++..  .+..++.+.+.......... ...+.+|+++|++|. |++|++++++    +..|++|
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm   77 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR   77 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence            34678999999999998876  77888888776555432211 225789999999995 5889999886    4479999


Q ss_pred             EecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEcCCCCEEEeeccchhhhhcccCC---
Q 012021           90 EYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDL-KPENLLLDEHGNLKVSDFGLSALAESKHQD---  165 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDl-Kp~NILld~~g~vkl~DFGla~~~~~~~~~---  165 (472)
                      ||+.|.+|...+..+      ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|.........   
T Consensus        78 eyI~G~~L~~~~~~~------~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         78 SYLAGAAMYQRPPRG------DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             eeecCccHHhhhhhh------hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            999999987543221      2357889999999999999999999 799999999999999999999854322210   


Q ss_pred             -C-------ccccccCCCcccChhhhcccC-CCCCcccchhhhHHHHHHhcCCCCCCCC
Q 012021          166 -G-------LLHTTCGTPAYVAPEVINRRG-YDGSKADIWSCGVILYVLLAGYLPFHDS  215 (472)
Q Consensus       166 -~-------~~~~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlGvil~~lltG~~Pf~~~  215 (472)
                       .       .......++.|++|+...--. .+-...+.++.|+-+|.++|+..++..+
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence             0       011234788999998653321 1224679999999999999999986543


No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.87  E-value=7.4e-22  Score=185.37  Aligned_cols=132  Identities=20%  Similarity=0.265  Sum_probs=108.7

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-----CCCCeeeEEEEEEeCC---EEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-----RHPNVVELYEVMASKT---KIY   86 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~l~~~~~~~~---~~~   86 (472)
                      .+.||+|+||.||.  +..++.. +||++.....   ...+.+.+|+.+++.+     .||||++++++++++.   .+|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            47899999999995  7777666 6999876432   2346789999999999     5799999999998874   444


Q ss_pred             -EEEEe--cCCCcccchhccCCCCHHHHHHHHHHHHHHH-HHHHhCCceecCCCCCcEEEcCC----CCEEEeecc
Q 012021           87 -FVMEY--VKGGELFGKVAKGKLKEDAARKYFQQLISAV-DYCHSRGVCHRDLKPENLLLDEH----GNLKVSDFG  154 (472)
Q Consensus        87 -lV~E~--~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL-~yLH~~giiHrDlKp~NILld~~----g~vkl~DFG  154 (472)
                       +|+||  +.+++|.+++.++.+++.  ..++.|++.++ +|||+++|+||||||+|||++.+    ++++|+||+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence             78999  557999999988777777  35678888777 99999999999999999999743    379999954


No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87  E-value=1.7e-22  Score=197.42  Aligned_cols=250  Identities=26%  Similarity=0.413  Sum_probs=175.7

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCc-----------------------------------EEEEEEeeccccc--c
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGM-----------------------------------SVAIKIIDKEKVL--K   50 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~-----------------------------------~vAiK~i~~~~~~--~   50 (472)
                      -.+.|+|++.||+|..+.||.|+-..+|.                                   +.|||.+-.-...  .
T Consensus       155 tiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~  234 (598)
T KOG4158|consen  155 TIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGD  234 (598)
T ss_pred             chhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCch
Confidence            34679999999999999999987653221                                   3556654211111  1


Q ss_pred             hhhHHHHHHHHH------H--------HHh--------cCCCCeeeEEEEEEe---------------------------
Q 012021           51 VGMIDQIKREIS------V--------MRL--------VRHPNVVELYEVMAS---------------------------   81 (472)
Q Consensus        51 ~~~~~~~~~Ei~------i--------l~~--------l~hpnIv~l~~~~~~---------------------------   81 (472)
                      ....+.+.+|..      .        .+.        -+|||||++.++|.+                           
T Consensus       235 ~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~  314 (598)
T KOG4158|consen  235 AHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGE  314 (598)
T ss_pred             HHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCC
Confidence            122233333321      1        111        259999999887632                           


Q ss_pred             CCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE--cCCC--CEEEeeccchh
Q 012021           82 KTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLL--DEHG--NLKVSDFGLSA  157 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILl--d~~g--~vkl~DFGla~  157 (472)
                      ...+|+||...+ .+|..++-.+..+....+-++.|+++|+.|||.+||.|||+|.+|||+  |+|+  .+.|+|||.+-
T Consensus       315 ~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  315 PKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             CceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            335899998774 488888888888888999999999999999999999999999999998  4444  48999999754


Q ss_pred             hhhcccC----CCccccccCCCcccChhhhcccCC-----CCCcccchhhhHHHHHHhcCCCCCCCCcHHHH--HHHHhc
Q 012021          158 LAESKHQ----DGLLHTTCGTPAYVAPEVINRRGY-----DGSKADIWSCGVILYVLLAGYLPFHDSNLMEM--YRKIGK  226 (472)
Q Consensus       158 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~--~~~i~~  226 (472)
                      --....-    ....-..-|...-||||+....+-     +-.++|.|++|.+.||+++...||.....+.+  ...-..
T Consensus       394 Ad~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~  473 (598)
T KOG4158|consen  394 ADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES  473 (598)
T ss_pred             eccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh
Confidence            2221100    011123457888999999854321     11489999999999999999999987543321  111122


Q ss_pred             cCCCCCCCCCHHHHHHHhcccCCCCCCcCChh
Q 012021          227 AEFKFPNWFAPEVRRLLSKILDPNPNTRISMT  258 (472)
Q Consensus       227 ~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~  258 (472)
                      .-+.+|..+++.+++++..+|++||++|++..
T Consensus       474 qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  474 QLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             hCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            33567888999999999999999999999854


No 422
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.87  E-value=2.7e-23  Score=223.69  Aligned_cols=248  Identities=25%  Similarity=0.397  Sum_probs=181.8

Q ss_pred             CeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccc-ccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEE
Q 012021           11 RYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEK-VLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        11 ~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~-~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      .|...+.||.+-|=+|.+|.+. .| .|+||++-+.. ...-....+..+|++ ...++|||.+.+.-+.+++...|+|-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            6889999999999999999884 34 49999997654 222222333345555 66779999999999988888999999


Q ss_pred             EecCCCcccchhccCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhh--cccCCC
Q 012021           90 EYVKGGELFGKVAKGK-LKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAE--SKHQDG  166 (472)
Q Consensus        90 E~~~gg~L~~~i~~~~-l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~--~~~~~~  166 (472)
                      +|+.. +|+|++..++ +...+.+.|+.||+.||..||..||+|+|||.|||||..-..+.|+||..-+..-  ......
T Consensus       101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            99955 8999998776 6778889999999999999999999999999999999999999999997533211  111110


Q ss_pred             ---ccccccCCCcccChhhhcccC----------CCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHHhccC--CC
Q 012021          167 ---LLHTTCGTPAYVAPEVINRRG----------YDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKIGKAE--FK  230 (472)
Q Consensus       167 ---~~~~~~gt~~y~aPE~~~~~~----------~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i~~~~--~~  230 (472)
                         .+.+...-.+|.|||.+...+          .-+++.||||+||+++||++ |++||.-..... |+.-....  .-
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a-Yr~~~~~~~e~~  258 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA-YRSGNADDPEQL  258 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh-HhccCccCHHHH
Confidence               122333445799999985422          12467899999999999988 688885322211 11110000  00


Q ss_pred             CCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          231 FPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       231 ~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +..--+..++++|..|++.||++|.++++.|+.
T Consensus       259 Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  259 LEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            001123468999999999999999999999875


No 423
>smart00090 RIO RIO-like kinase.
Probab=99.85  E-value=8.6e-21  Score=181.96  Aligned_cols=143  Identities=18%  Similarity=0.197  Sum_probs=115.2

Q ss_pred             eEEEeeEcccCCeEEEEEE-EcCCCcEEEEEEeecccccc---------------------hhhHHHHHHHHHHHHhcCC
Q 012021           12 YELGRLLGQGTFAKVHYAR-NLKTGMSVAIKIIDKEKVLK---------------------VGMIDQIKREISVMRLVRH   69 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~-~~~~g~~vAiK~i~~~~~~~---------------------~~~~~~~~~Ei~il~~l~h   69 (472)
                      |++.+.||+|+||.||+|. +..+|+.||+|++.......                     ......+.+|+.+++.+.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            8899999999999999999 66799999999997543110                     0012346789999999975


Q ss_pred             C--CeeeEEEEEEeCCEEEEEEEecCCCcccchh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEcCC
Q 012021           70 P--NVVELYEVMASKTKIYFVMEYVKGGELFGKV-AKGKLKEDAARKYFQQLISAVDYCHSRG-VCHRDLKPENLLLDEH  145 (472)
Q Consensus        70 p--nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i-~~~~l~e~~~~~i~~ql~~aL~yLH~~g-iiHrDlKp~NILld~~  145 (472)
                      .  .+.++++.    ...|+||||+.|.+|.... ....+.+..+..++.||+.++.+||++| ++||||||+||+++ +
T Consensus       110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~  184 (237)
T smart00090      110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D  184 (237)
T ss_pred             cCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C
Confidence            3  34455543    2358999999998887665 3456777778899999999999999999 99999999999999 8


Q ss_pred             CCEEEeeccchhhh
Q 012021          146 GNLKVSDFGLSALA  159 (472)
Q Consensus       146 g~vkl~DFGla~~~  159 (472)
                      +.++|+|||.|...
T Consensus       185 ~~i~LiDFg~a~~~  198 (237)
T smart00090      185 GKVVIIDVSQSVEL  198 (237)
T ss_pred             CCEEEEEChhhhcc
Confidence            89999999987744


No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84  E-value=1.1e-21  Score=183.17  Aligned_cols=242  Identities=20%  Similarity=0.361  Sum_probs=196.5

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -++...+..+|.+.-.|+.|++++  .|..++.|+++-.... ......+..|.-.|+...||||+.+++.|.+..++.+
T Consensus       188 d~~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppnlv~  264 (448)
T KOG0195|consen  188 DVSSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVI  264 (448)
T ss_pred             chhhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceE
Confidence            344556788899999999999988  5667888888655432 2334568889999999999999999999999999999


Q ss_pred             EEEecCCCcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEcCCCCEEEe--eccchhhhh
Q 012021           88 VMEYVKGGELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRG--VCHRDLKPENLLLDEHGNLKVS--DFGLSALAE  160 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~g--iiHrDlKp~NILld~~g~vkl~--DFGla~~~~  160 (472)
                      +..|++-|+|+..+..+   ..+..++.+++.++++|+.|||+..  |.---|....+++|++-+.+|+  |--++    
T Consensus       265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfs----  340 (448)
T KOG0195|consen  265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFS----  340 (448)
T ss_pred             eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceee----
Confidence            99999999999999764   3678899999999999999999873  4445688899999999877664  22111    


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCC--CcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHH--hccCCCCCCCCC
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDG--SKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKI--GKAEFKFPNWFA  236 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~s  236 (472)
                      .+.     ....-.|.||+||.++.++.+.  .++|+|||.+++|||.|.+.||.+-++++.--+|  ......+|+.++
T Consensus       341 fqe-----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis  415 (448)
T KOG0195|consen  341 FQE-----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             eec-----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCcc
Confidence            111     1234578999999998776543  4799999999999999999999998887655444  345678999999


Q ss_pred             HHHHHHHhcccCCCCCCcCChhhhh
Q 012021          237 PEVRRLLSKILDPNPNTRISMTKIM  261 (472)
Q Consensus       237 ~~l~~li~~~L~~dP~~Rpt~~eil  261 (472)
                      +.+..|+.-|+..||.+||.++.|+
T Consensus       416 ~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  416 RHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHHHHhcCCCCcCCCcceeh
Confidence            9999999999999999999998875


No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83  E-value=1.7e-20  Score=205.61  Aligned_cols=236  Identities=19%  Similarity=0.321  Sum_probs=179.4

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      ...|.|-+.||+|+||+||.|.+.. |+.||+|+-.....+..-...+++..+. +.  --+.|..+...+.-.+.-++|
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~--~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQ--MLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hh--hhcchHHHHHHHccCCcceee
Confidence            4589999999999999999999866 9999999988777665444444444333 11  135666666666777788999


Q ss_pred             EEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEc-------CCCCEEEeeccchhhhh
Q 012021           89 MEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLD-------EHGNLKVSDFGLSALAE  160 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld-------~~g~vkl~DFGla~~~~  160 (472)
                      +||.+-|+|.+++.. +.+++..+..+..|++..|+.||..||||+||||+|.||.       .+--++|+|||-|.-..
T Consensus       773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK  852 (974)
T ss_pred             eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence            999999999999976 5799999999999999999999999999999999999993       22359999999876544


Q ss_pred             cccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccCC-----CCCCCC
Q 012021          161 SKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAEF-----KFPNWF  235 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~~-----~~~~~~  235 (472)
                      .-.....+...++|-.+-.+|...++.+. +.+|.|.|..+++.||.|+.-       +    ...+..     .++..+
T Consensus       853 lfp~~~~F~~~~~td~f~C~EM~~grpWt-Yq~DyfGlAa~~h~mLFG~y~-------q----~~~g~~~~~~~~~~Ry~  920 (974)
T KOG1166|consen  853 LFPDGTKFKAVWHTDLFDCIEMREGRPWT-YQIDYFGLAATVHVMLFGKYM-------E----VKNGSSWMVKTNFPRYW  920 (974)
T ss_pred             EcCCCcEEeeeeccccchhHHHhcCCCCc-hhhhhHHHHHHHHHHHHHHHH-------H----hcCCcceeccccchhhh
Confidence            32223356778899999999999999986 999999999999999999642       1    222211     122222


Q ss_pred             CHH-HHHHHhcccCCCCCCcCChhhh
Q 012021          236 APE-VRRLLSKILDPNPNTRISMTKI  260 (472)
Q Consensus       236 s~~-l~~li~~~L~~dP~~Rpt~~ei  260 (472)
                      ..+ ..+++..+|.+|-..=|...+|
T Consensus       921 ~~~~W~~~F~~lLN~~~~~~p~l~~l  946 (974)
T KOG1166|consen  921 KRDMWNKFFDLLLNPDCDTLPNLQEL  946 (974)
T ss_pred             hHHHHHHHHHHHhCcCcccchhHHHH
Confidence            222 3467788888554444555554


No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82  E-value=1.6e-19  Score=169.77  Aligned_cols=137  Identities=23%  Similarity=0.335  Sum_probs=116.1

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch-----hhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV-----GMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      +.||+|++|.||+|.+  +|..|++|+.........     .....+.+|+.++..+.|++|+....++...+..+++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            6799999999999987  788899998754332211     123467889999999999999888888777888999999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      |++|++|.+.+.....   ....++.+++.+|.++|+.|++|||++|.|||++ ++.++|+|||++..
T Consensus        80 ~~~G~~L~~~~~~~~~---~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNGM---EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhccH---HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999988865322   7889999999999999999999999999999999 78999999998764


No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.80  E-value=2e-19  Score=167.80  Aligned_cols=139  Identities=19%  Similarity=0.278  Sum_probs=110.3

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch-------------------hhHHHHHHHHHHHHhcCCCC-
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV-------------------GMIDQIKREISVMRLVRHPN-   71 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-------------------~~~~~~~~Ei~il~~l~hpn-   71 (472)
                      |.+.+.||+|+||.||++.+. +|+.||||++........                   .......+|+.++..+.|++ 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            899999999999999999874 899999999865431000                   01123678899999988774 


Q ss_pred             -eeeEEEEEEeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEE
Q 012021           72 -VVELYEVMASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKV  150 (472)
Q Consensus        72 -Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl  150 (472)
                       ++..++    ....++||||++|++|......     .....++.+++.++.++|+.||+||||||+||+++.++.++|
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~l  166 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYI  166 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEE
Confidence             444443    2345899999999988765431     346678899999999999999999999999999999999999


Q ss_pred             eeccchhhhh
Q 012021          151 SDFGLSALAE  160 (472)
Q Consensus       151 ~DFGla~~~~  160 (472)
                      +|||++....
T Consensus       167 iDfg~~~~~~  176 (198)
T cd05144         167 IDWPQMVSTD  176 (198)
T ss_pred             EECCccccCC
Confidence            9999886443


No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79  E-value=6.1e-19  Score=164.29  Aligned_cols=133  Identities=21%  Similarity=0.294  Sum_probs=109.3

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccc-----hhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEe
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK-----VGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      .||+|+||+||++..  +|..|++|.........     .....++.+|+.+++.+.|+++....-++...+..++||||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            489999999999984  77899999965432211     11236678999999999988776666566667778999999


Q ss_pred             cCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           92 VKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        92 ~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      ++|++|.+.+.....      .++.+++.+|.+||+.|++|||++|.||+++ ++.++++|||++..
T Consensus        79 ~~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        79 IEGKPLKDVIEEGND------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             ECCccHHHHHhhcHH------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999887754322      7899999999999999999999999999999 88999999998765


No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.77  E-value=1.9e-18  Score=185.19  Aligned_cols=140  Identities=21%  Similarity=0.290  Sum_probs=113.6

Q ss_pred             CCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCE
Q 012021           10 QRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL-----KVGMIDQIKREISVMRLVRHPNVVELYEVMASKTK   84 (472)
Q Consensus        10 ~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   84 (472)
                      ..|...+.||+|+||+||++.+.  +..+++|+.......     .....+.+.+|+.+++.++|++++.++.++.....
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            34567899999999999999874  444555543322111     11123568899999999999999988888777778


Q ss_pred             EEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021           85 IYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus        85 ~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                      .++||||++|++|.+++.       ....++.+++.+|.|||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus       411 ~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            899999999999988775       457799999999999999999999999999999 6789999999998753


No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.77  E-value=2.4e-18  Score=158.61  Aligned_cols=139  Identities=20%  Similarity=0.307  Sum_probs=102.2

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHH---------------------HHHHHHHHHHhcCCC--
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMID---------------------QIKREISVMRLVRHP--   70 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~---------------------~~~~Ei~il~~l~hp--   70 (472)
                      +++.||+|+||+||.|.+. +|+.||||++............                     ....|...+..+.+.  
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            3578999999999999986 8999999998764322111111                     114566777666544  


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCCCcccc-hhccCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCE
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKGGELFG-KVAKGKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~-~i~~~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~v  148 (472)
                      .+.+++++    ...++||||++|+.+.. .+...... ..++.++.+++.++.++|. +||+||||||+||+++ ++.+
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~  153 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV  153 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence            34555554    23589999999965432 22221111 6788999999999999999 9999999999999999 8999


Q ss_pred             EEeeccchhhh
Q 012021          149 KVSDFGLSALA  159 (472)
Q Consensus       149 kl~DFGla~~~  159 (472)
                      +|+|||.+...
T Consensus       154 ~liDfg~a~~~  164 (187)
T cd05119         154 YIIDVPQAVEI  164 (187)
T ss_pred             EEEECcccccc
Confidence            99999988644


No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75  E-value=2.2e-19  Score=182.19  Aligned_cols=248  Identities=23%  Similarity=0.313  Sum_probs=166.2

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEE-------E
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYE-------V   78 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~-------~   78 (472)
                      ...+.+.+..+..+++.+....-..+   .+.++-+..+..+   ........+++-.+.-..|-+..-+.+       .
T Consensus       243 ~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~---~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~  319 (516)
T KOG1033|consen  243 SGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDS---LCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFES  319 (516)
T ss_pred             cccccccccccccccCCchhhhhcccchhhhhccchhhhccc---hhhhhhhhhhhhheeccccCCcccccCCCCchhhh
Confidence            34556666677777776665443322   2333333332222   122334455555555444433332222       1


Q ss_pred             E-----EeCCEEEEEEEecCCCcccchhccC----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEE
Q 012021           79 M-----ASKTKIYFVMEYVKGGELFGKVAKG----KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLK  149 (472)
Q Consensus        79 ~-----~~~~~~~lV~E~~~gg~L~~~i~~~----~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vk  149 (472)
                      +     ....+.|+.|++|.-.+|.+++...    ..+......++.|++.|++|   +|.+|||+||.||+...++.+|
T Consensus       320 ~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~k  396 (516)
T KOG1033|consen  320 SKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLK  396 (516)
T ss_pred             ccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhh
Confidence            1     1133589999999999999999753    36677889999999999999   9999999999999999999999


Q ss_pred             Eeeccchhhhhccc----CCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhc-CCCCCCCCcHHHHHHHH
Q 012021          150 VSDFGLSALAESKH----QDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLA-GYLPFHDSNLMEMYRKI  224 (472)
Q Consensus       150 l~DFGla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~llt-G~~Pf~~~~~~~~~~~i  224 (472)
                      |.|||+........    .....+...||..||+||.+.+..|. .++||||||+||+||+. =..+|...   .....+
T Consensus       397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~-~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~  472 (516)
T KOG1033|consen  397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYS-EKVDIYALGLILAELLIQFSTQFERI---ATLTDI  472 (516)
T ss_pred             hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhh-hhcchhhHHHHHHHHHHHhccHHHHH---Hhhhhh
Confidence            99999977554332    11123556799999999999988886 89999999999999997 23333221   222233


Q ss_pred             hccCCCCCCC-CCHHHHHHHhcccCCCCCCcCChhhhhcCccc
Q 012021          225 GKAEFKFPNW-FAPEVRRLLSKILDPNPNTRISMTKIMENSWF  266 (472)
Q Consensus       225 ~~~~~~~~~~-~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f  266 (472)
                      ..+.++..-+ --|+-..|+.++|.+.|.+||++.+.--|+|.
T Consensus       473 r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  473 RDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             hcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            3333321111 12455689999999999999977777666664


No 432
>PF03822 NAF:  NAF domain;  InterPro: IPR004041 The NAF domain is a 24 amino acid domain that is found in a plant-specific subgroup of serine-threonine protein kinases (CIPKs), that interact with calcineurin B-like calcium sensor proteins (CBLs). Whereas the N-terminal part of CIPKs comprises a conserved catalytic domain typical of Ser-Thr kinases, the much less conserved C-terminal domain appears to be unique to this subgroup of kinases. The only exception is the NAF domain that forms an 'island of conservation' in this otherwise variable region. The NAF domain has been named after the prominent conserved amino acids Asn-Ala-Phe. It represents a minimum protein interaction module that is both necessary and sufficient to mediate the interaction with the CBL calcium sensor proteins []. The secondary structure of the NAF domain is currently not known, but secondary structure computation of the C-terminal region of Arabidopsis thaliana CBL-interacting protein kinase 1 revealed a long helical structure [].; GO: 0007165 signal transduction; PDB: 2ZFD_B 2EHB_D.
Probab=99.75  E-value=7.8e-19  Score=129.58  Aligned_cols=60  Identities=68%  Similarity=1.025  Sum_probs=48.4

Q ss_pred             CCCCCCchhhhccCCCCCCCCchhhhhh---cccceeeccCCHHHHHHHHHHHHhHcCcEEEE
Q 012021          310 KPCNLNAFDIISFSAGFDLSGLFEEREK---RKEVRFTSNKPVSTIISKLEGIAKLLRLKVKK  369 (472)
Q Consensus       310 ~~~~~~~f~~~~~s~~~~ls~l~~~~~~---~~~~rf~~~~~~~~i~~~l~~~~~~l~~~v~~  369 (472)
                      +|..+|||||||||+|||||+||++...   ++++||+|++||++|++|||++|+.+||+|+|
T Consensus         1 ~p~~lNAFdiIS~S~G~DLSgLFe~~~~~~~~~~~RF~S~~~~~~Ii~klEe~a~~~~~~V~K   63 (63)
T PF03822_consen    1 KPKSLNAFDIISLSSGFDLSGLFEEKDKSSVKRETRFTSKEPASEIIEKLEEIAKKLGFRVKK   63 (63)
T ss_dssp             --EE--HHHHHCTSTTTSCGGGGGCG-S-SS---EEEEESS-HHHHHHHHHHHHHHTTEEEEE
T ss_pred             CCccccHHHHHHhccCCChHHhcCccccccccccceEecCCCHHHHHHHHHHHHHhcCceeeC
Confidence            3678999999999999999999986543   57999999999999999999999999999986


No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.74  E-value=1.7e-17  Score=159.40  Aligned_cols=137  Identities=18%  Similarity=0.301  Sum_probs=107.4

Q ss_pred             eeEc-ccCCeEEEEEEEcCCCcEEEEEEeecccc----c------chhhHHHHHHHHHHHHhcCCCCe--eeEEEEEEeC
Q 012021           16 RLLG-QGTFAKVHYARNLKTGMSVAIKIIDKEKV----L------KVGMIDQIKREISVMRLVRHPNV--VELYEVMASK   82 (472)
Q Consensus        16 ~~LG-~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~----~------~~~~~~~~~~Ei~il~~l~hpnI--v~l~~~~~~~   82 (472)
                      ..|| .||.|+||.+..  .+..++||.+.....    .      .......+.+|+.++..+.|++|  ++++++....
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            4577 788888888876  478999998864321    1      11223568899999999998875  6777764332


Q ss_pred             -C---EEEEEEEecCC-CcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           83 -T---KIYFVMEYVKG-GELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        83 -~---~~~lV~E~~~g-g~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                       .   ..++|||+++| .+|.+++..+.+++..    +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+.
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~  190 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGE  190 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcc
Confidence             2   23599999998 6888888777777654    5689999999999999999999999999999999999999776


Q ss_pred             h
Q 012021          158 L  158 (472)
Q Consensus       158 ~  158 (472)
                      .
T Consensus       191 ~  191 (239)
T PRK01723        191 L  191 (239)
T ss_pred             c
Confidence            4


No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73  E-value=1.1e-17  Score=172.64  Aligned_cols=199  Identities=25%  Similarity=0.395  Sum_probs=156.3

Q ss_pred             HHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccchhccC--CCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCCCCcE
Q 012021           64 MRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGKVAKG--KLKEDAARKYFQQLISAVDYCHSRGV-CHRDLKPENL  140 (472)
Q Consensus        64 l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~aL~yLH~~gi-iHrDlKp~NI  140 (472)
                      |+.+.|.|+.++++.+.++...+.|.+||.-|+|.+.+...  .++.-....++++|+.||.|+|+-.| +|+.+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            45788999999999999999999999999999999999774  57778888899999999999998865 9999999999


Q ss_pred             EEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCC------CCCcccchhhhHHHHHHhcCCCCCCC
Q 012021          141 LLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGY------DGSKADIWSCGVILYVLLAGYLPFHD  214 (472)
Q Consensus       141 Lld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~DiwSlGvil~~lltG~~Pf~~  214 (472)
                      ++|....+||+|||+..+..........+...-..-|.|||.+.....      .+.+.||||+|++++|+++...||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            999999999999999776542111111112223446899999876422      24679999999999999999999976


Q ss_pred             C----cHHHHHHHHhc-cCCCC-CC-----CCCHHHHHHHhcccCCCCCCcCChhhhhc
Q 012021          215 S----NLMEMYRKIGK-AEFKF-PN-----WFAPEVRRLLSKILDPNPNTRISMTKIME  262 (472)
Q Consensus       215 ~----~~~~~~~~i~~-~~~~~-~~-----~~s~~l~~li~~~L~~dP~~Rpt~~eil~  262 (472)
                      .    ...++..++.+ +...+ |.     .+.+++..++.+||..+|..||++++|-.
T Consensus       161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             ccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            3    22345555555 22212 21     24557899999999999999999998854


No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.70  E-value=1.8e-16  Score=139.05  Aligned_cols=132  Identities=23%  Similarity=0.322  Sum_probs=113.8

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC--CCeeeEEEEEEeCCEEEEEEEe
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH--PNVVELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~~~~~lV~E~   91 (472)
                      +++.||.|.++.||++.+  .+..+++|.+.....     ...+.+|+.+++.++|  .++++++.+....+..|++|||
T Consensus         2 ~~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEe--cCCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence            468899999999999998  347899999865532     3568899999999976  5899999998888899999999


Q ss_pred             cCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           92 VKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSR---GVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        92 ~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~---giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      +.|+.+...      +......++.+++.++.++|..   +++|+|++|+||+++..+.++++|||++..
T Consensus        75 ~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          75 IEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            999877654      5667778899999999999985   799999999999999989999999998763


No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66  E-value=2.1e-17  Score=178.56  Aligned_cols=261  Identities=25%  Similarity=0.432  Sum_probs=210.9

Q ss_pred             ccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEE
Q 012021            8 LMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYF   87 (472)
Q Consensus         8 l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   87 (472)
                      -.+.+.+.+-+-.|+++.++.+.-..+|...++|+..+.........+.+..+-.++-...+|-++.....+......++
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            45567888899999999999999888888888887654432222223444455555555566777766666667788999


Q ss_pred             EEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcc----
Q 012021           88 VMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESK----  162 (472)
Q Consensus        88 V~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~----  162 (472)
                      +++|+.|++|...+.. +..+++-++.+...+..+++|||+..+.|||++|.|+|...+|..+++|||........    
T Consensus       882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~  961 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT  961 (1205)
T ss_pred             hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence            9999999999999987 66899999999999999999999999999999999999999999999999843221100    


Q ss_pred             ------------------cCC-------CccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcH
Q 012021          163 ------------------HQD-------GLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNL  217 (472)
Q Consensus       163 ------------------~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~  217 (472)
                                        ...       ..-....||+.|.+||.+.+... +..+|+|+.|+++++.++|..||.+...
T Consensus       962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~h-gs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen  962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRH-GSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred             CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccC-CCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence                              000       11223468999999999988765 4789999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCCC---CCCHHHHHHHhcccCCCCCCcCChh---hhhcCcccccC
Q 012021          218 MEMYRKIGKAEFKFPN---WFAPEVRRLLSKILDPNPNTRISMT---KIMENSWFRKG  269 (472)
Q Consensus       218 ~~~~~~i~~~~~~~~~---~~s~~l~~li~~~L~~dP~~Rpt~~---eil~h~~f~~~  269 (472)
                      ...++.|.+.....|.   ..++++++++.+.|..+|.+|..+.   ++-.|+||+..
T Consensus      1041 q~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1041 QQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             hhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            9999999888777664   3789999999999999999999988   89999999864


No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61  E-value=3.5e-16  Score=161.68  Aligned_cols=257  Identities=19%  Similarity=0.221  Sum_probs=196.7

Q ss_pred             cccCCeEEEeeEcc--cCCeEEEEEEE--cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEe
Q 012021            7 ILMQRYELGRLLGQ--GTFAKVHYARN--LKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMAS   81 (472)
Q Consensus         7 ~l~~~y~i~~~LG~--G~fg~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~   81 (472)
                      ....++.+...+|.  |.+|.||.+..  ..++..+|+|.-+.... .......-.+|+...+.++ |+|.++.+..++.
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~  189 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG  189 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-CccccccccchhhcccccCccccccccCccccc
Confidence            44567888999999  99999999998  88999999998322111 0011122346777777775 9999999999999


Q ss_pred             CCEEEEEEEecCCCcccchhcc-C-CCCHHHHHHHHHHHHH----HHHHHHhCCceecCCCCCcEEEcCC-CCEEEeecc
Q 012021           82 KTKIYFVMEYVKGGELFGKVAK-G-KLKEDAARKYFQQLIS----AVDYCHSRGVCHRDLKPENLLLDEH-GNLKVSDFG  154 (472)
Q Consensus        82 ~~~~~lV~E~~~gg~L~~~i~~-~-~l~e~~~~~i~~ql~~----aL~yLH~~giiHrDlKp~NILld~~-g~vkl~DFG  154 (472)
                      .+..|+-+|++. .+|..+... . -+++..++..+.+...    ||.++|+.+++|-|+||+||++..+ ...++.|||
T Consensus       190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~  268 (524)
T KOG0601|consen  190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG  268 (524)
T ss_pred             CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence            999999999995 677777654 3 4899999999999999    9999999999999999999999999 889999999


Q ss_pred             chhhhhcccCCCcc---ccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCC--cHHHHHHHHhccCC
Q 012021          155 LSALAESKHQDGLL---HTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDS--NLMEMYRKIGKAEF  229 (472)
Q Consensus       155 la~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~--~~~~~~~~i~~~~~  229 (472)
                      +...+....-....   ...-|...|++||...+  ..+...|+|++|.+..+..+|..+....  +.....+.+. ...
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-ip~  345 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-IPL  345 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-Cch
Confidence            98766554322211   22257788999998754  3467899999999999999887765443  2222111111 122


Q ss_pred             CCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          230 KFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       230 ~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .+....+.++...+..|++.+|-.|++.+.+++|+++..
T Consensus       346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            233345677888999999999999999999999998874


No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.56  E-value=1.2e-14  Score=151.52  Aligned_cols=141  Identities=22%  Similarity=0.311  Sum_probs=98.3

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccch-------------------------------hhHH------HHH
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKV-------------------------------GMID------QIK   58 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-------------------------------~~~~------~~~   58 (472)
                      +.||.|++|.||+|+. .+|+.||||+.........                               +...      .+.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5799999999999986 5899999999865321000                               0001      133


Q ss_pred             HHHHHHHhcC-----CCCeeeEEEEEEeCCEEEEEEEecCCCcccchhccC--CCCHHHHHHHHHHHHH-HHHHHHhCCc
Q 012021           59 REISVMRLVR-----HPNVVELYEVMASKTKIYFVMEYVKGGELFGKVAKG--KLKEDAARKYFQQLIS-AVDYCHSRGV  130 (472)
Q Consensus        59 ~Ei~il~~l~-----hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~--~l~e~~~~~i~~ql~~-aL~yLH~~gi  130 (472)
                      +|...+.+++     ++++.-..-+....+..++||||++|++|.+.....  ..+   ...++.+++. .+..+|..|+
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~  278 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF  278 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence            4555555442     344432222233345679999999999998876432  222   2345566655 4788999999


Q ss_pred             eecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021          131 CHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus       131 iHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                      +|+|+||.||+++.+|.++++|||++....
T Consensus       279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       279 FHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             eeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            999999999999999999999999987654


No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.54  E-value=2.8e-15  Score=158.29  Aligned_cols=144  Identities=22%  Similarity=0.409  Sum_probs=99.8

Q ss_pred             cCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--------------------------c-----hhhHHHH
Q 012021            9 MQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--------------------------K-----VGMIDQI   57 (472)
Q Consensus         9 ~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--------------------------~-----~~~~~~~   57 (472)
                      ...|+. +.||.|++|.||.|+.+.+|+.||||+..+....                          +     .+..+.+
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            446776 8899999999999999888999999999754210                          0     0122334


Q ss_pred             HHHHHHH------HhcC----CCCeeeEEEEE-EeCCEEEEEEEecCCCcccch--hcc-C----CCCHHHHHHHHHHHH
Q 012021           58 KREISVM------RLVR----HPNVVELYEVM-ASKTKIYFVMEYVKGGELFGK--VAK-G----KLKEDAARKYFQQLI  119 (472)
Q Consensus        58 ~~Ei~il------~~l~----hpnIv~l~~~~-~~~~~~~lV~E~~~gg~L~~~--i~~-~----~l~e~~~~~i~~ql~  119 (472)
                      .+|++.+      .++.    +.+.+.+-.++ +-.+..++||||+.|+.+.+.  +.. +    .+.+..+..++.|++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            4444433      3332    33333333333 235567899999999999764  322 3    255555666666665


Q ss_pred             HHHHHHHhCCceecCCCCCcEEEcCCC----CEEEeeccchhhhh
Q 012021          120 SAVDYCHSRGVCHRDLKPENLLLDEHG----NLKVSDFGLSALAE  160 (472)
Q Consensus       120 ~aL~yLH~~giiHrDlKp~NILld~~g----~vkl~DFGla~~~~  160 (472)
                             ..|++|+|+||.||+++.+|    .++++|||++....
T Consensus       278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence                   58999999999999999988    99999999887554


No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.49  E-value=4e-13  Score=124.36  Aligned_cols=141  Identities=18%  Similarity=0.230  Sum_probs=104.3

Q ss_pred             EeeEcccCCeEEEEEEEcC------CCcEEEEEEeecccc-------------------cchhhHHH----HHHHHHHHH
Q 012021           15 GRLLGQGTFAKVHYARNLK------TGMSVAIKIIDKEKV-------------------LKVGMIDQ----IKREISVMR   65 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~------~g~~vAiK~i~~~~~-------------------~~~~~~~~----~~~Ei~il~   65 (472)
                      ...||.|--+.||.|....      .+..+|||+......                   .+......    .++|+..|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3568999999999998653      357999999742110                   01111223    348999999


Q ss_pred             hcCC--CCeeeEEEEEEeCCEEEEEEEecCCCcccc-hhccCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEE
Q 012021           66 LVRH--PNVVELYEVMASKTKIYFVMEYVKGGELFG-KVAKGKLKEDAARKYFQQLISAVDYC-HSRGVCHRDLKPENLL  141 (472)
Q Consensus        66 ~l~h--pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~-~i~~~~l~e~~~~~i~~ql~~aL~yL-H~~giiHrDlKp~NIL  141 (472)
                      ++..  -++.+++++    ...++||||+.+..+.. .+....+++..+..++.+++.+|..+ |..|++|+||+|.|||
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            8863  456677765    45789999997754432 33444566777788899999999999 8999999999999999


Q ss_pred             EcCCCCEEEeeccchhhhh
Q 012021          142 LDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus       142 ld~~g~vkl~DFGla~~~~  160 (472)
                      ++ ++.+.|+|||.|....
T Consensus       158 ~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         158 WH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             EE-CCcEEEEECCCceeCC
Confidence            97 5789999999776543


No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.48  E-value=2.4e-13  Score=122.93  Aligned_cols=127  Identities=20%  Similarity=0.320  Sum_probs=97.1

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEEEEEEecC
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lV~E~~~   93 (472)
                      ++.|+.|.++.||.++.  .+..|++|+......    ......+|+.+++.+.+.++ .+++.+..  +..++||||++
T Consensus         3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence            46789999999999986  478999999755431    11245789999998865554 45555433  33589999999


Q ss_pred             CCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eecCCCCCcEEEcCCCCEEEeeccchh
Q 012021           94 GGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGV-----CHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus        94 gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~gi-----iHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      |.++...       ......++.+++.+|..||+.++     +|+|++|.||+++ ++.++++|||.+.
T Consensus        75 G~~l~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          75 GSELLTE-------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             CCccccc-------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            9887643       11123467899999999999985     9999999999999 6789999999765


No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.45  E-value=6.5e-13  Score=138.92  Aligned_cols=171  Identities=18%  Similarity=0.331  Sum_probs=131.5

Q ss_pred             EEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccchhccCCCC
Q 012021           28 YARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGKVAKGKLK  107 (472)
Q Consensus        28 ~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~~l~  107 (472)
                      .|..+.++.+|.|.+.+.+.-   ...+.+++-+.-|+.++||||+++++.++.++.+|+|+|.+..  |..+++.  ++
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~--l~  102 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE--LG  102 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH--hH
Confidence            355677899999999876643   3456788889999999999999999999999999999999865  4444443  33


Q ss_pred             HHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhccc
Q 012021          108 EDAARKYFQQLISAVDYCH-SRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRR  186 (472)
Q Consensus       108 e~~~~~i~~ql~~aL~yLH-~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  186 (472)
                      ......-++||+.||.||| ..+++|++|.-..|+++..|..||.+|.++........  ......---.|..|+.+...
T Consensus       103 ~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s  180 (690)
T KOG1243|consen  103 KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS  180 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence            7777788999999999998 56899999999999999999999999998764433221  01111122246677765433


Q ss_pred             CCCCCcccchhhhHHHHHHhcCCC
Q 012021          187 GYDGSKADIWSCGVILYVLLAGYL  210 (472)
Q Consensus       187 ~~~~~~~DiwSlGvil~~lltG~~  210 (472)
                      .   -..|.|.|||++++++.|.+
T Consensus       181 ~---~s~D~~~Lg~li~el~ng~~  201 (690)
T KOG1243|consen  181 E---WSIDSWGLGCLIEELFNGSL  201 (690)
T ss_pred             c---cchhhhhHHHHHHHHhCccc
Confidence            3   24799999999999999943


No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44  E-value=6.9e-14  Score=144.80  Aligned_cols=253  Identities=19%  Similarity=0.177  Sum_probs=189.8

Q ss_pred             CCcccCCeEEEeeEcccCCeEEEEEEEc-CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC
Q 012021            5 GSILMQRYELGRLLGQGTFAKVHYARNL-KTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLV-RHPNVVELYEVMASK   82 (472)
Q Consensus         5 g~~l~~~y~i~~~LG~G~fg~Vy~a~~~-~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   82 (472)
                      .....++|.++..||.|.|+.|+..... .++..+++|...+......+... -..|+-+...+ .|.++++++..+...
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccc
Confidence            4566788999999999999999987765 67889999987655433222111 22455555555 499999999999999


Q ss_pred             CEEEEEEEecCCCcccchhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCC-CCEEEeeccchhhhh
Q 012021           83 TKIYFVMEYVKGGELFGKVA-KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEH-GNLKVSDFGLSALAE  160 (472)
Q Consensus        83 ~~~~lV~E~~~gg~L~~~i~-~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~-g~vkl~DFGla~~~~  160 (472)
                      ...|+-.|||+++++...+. ...+++...+++..|++.++.++|+..++|+|+||.||++..+ +..++.|||.+....
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~  418 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA  418 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence            99999999999998765553 2568899999999999999999999999999999999999886 788999999886422


Q ss_pred             cccCCCccccccCCCccc-ChhhhcccCCCCCcccchhhhHHHHHHhcCCCC-CCCCcHHHHHHHHhccCCCCCCCCCHH
Q 012021          161 SKHQDGLLHTTCGTPAYV-APEVINRRGYDGSKADIWSCGVILYVLLAGYLP-FHDSNLMEMYRKIGKAEFKFPNWFAPE  238 (472)
Q Consensus       161 ~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~P-f~~~~~~~~~~~i~~~~~~~~~~~s~~  238 (472)
                      ...     ....++-.+. .+|++........++|++|||..+.+.++|..- +....    ...|..+.....+....+
T Consensus       419 ~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----~~~i~~~~~p~~~~~~~~  489 (524)
T KOG0601|consen  419 FSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----SLTIRSGDTPNLPGLKLQ  489 (524)
T ss_pred             eec-----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc----ceeeecccccCCCchHHh
Confidence            211     1122333444 355555444455899999999999999998643 22222    223444545544555588


Q ss_pred             HHHHHhcccCCCCCCcCChhhhhcCcccc
Q 012021          239 VRRLLSKILDPNPNTRISMTKIMENSWFR  267 (472)
Q Consensus       239 l~~li~~~L~~dP~~Rpt~~eil~h~~f~  267 (472)
                      +..+...+..+++..|+.+.++..|+-|.
T Consensus       490 ~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  490 LQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hhhhhhhhcCCccccchhhhhhcccchhh
Confidence            89999999999999999999998876554


No 444
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33  E-value=1.2e-12  Score=126.24  Aligned_cols=201  Identities=19%  Similarity=0.310  Sum_probs=141.3

Q ss_pred             HHhcCCCCeeeEEEEEEeC-----CEEEEEEEecCCCcccchhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC--Cce
Q 012021           64 MRLVRHPNVVELYEVMASK-----TKIYFVMEYVKGGELFGKVAK-----GKLKEDAARKYFQQLISAVDYCHSR--GVC  131 (472)
Q Consensus        64 l~~l~hpnIv~l~~~~~~~-----~~~~lV~E~~~gg~L~~~i~~-----~~l~e~~~~~i~~ql~~aL~yLH~~--gii  131 (472)
                      |-.+-|.|||+++.|+.+.     ....++.||+..|++..++++     ..+......+|.-||+.||.|||+.  -|+
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            4455699999999998544     458899999999999888864     3588889999999999999999988  599


Q ss_pred             ecCCCCCcEEEcCCCCEEEeeccchhhhhcc--cCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCC
Q 012021          132 HRDLKPENLLLDEHGNLKVSDFGLSALAESK--HQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGY  209 (472)
Q Consensus       132 HrDlKp~NILld~~g~vkl~DFGla~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~  209 (472)
                      |+++..+-|++..+|-+|+.---.......-  ..........|-++|.|||.=..... +.++|||++|....+|..|.
T Consensus       201 hgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~-~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNT-TGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             cCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCccccc-ccchhhhhhhHHHHHHHHhe
Confidence            9999999999999998887432111110000  00011122346788999996433333 35799999999999999887


Q ss_pred             CCCCC-CcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          210 LPFHD-SNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       210 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      .--.. .+....-..+.+.-+....   +--+.+|.+||+..|+.||++.+++.||..-+
T Consensus       280 iq~tnseS~~~~ee~ia~~i~~len---~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  280 IQSTNSESKVEVEENIANVIIGLEN---GLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             eccCCCcceeehhhhhhhheeeccC---ccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence            64222 2221222222222222111   12357899999999999999999999997754


No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.30  E-value=2.5e-11  Score=114.26  Aligned_cols=139  Identities=21%  Similarity=0.285  Sum_probs=110.1

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC--CCeeeEEEEEEeC---CEEEEEEE
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH--PNVVELYEVMASK---TKIYFVME   90 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~---~~~~lV~E   90 (472)
                      +.||.|..+.||++... +|+.+++|+.......  .....+.+|+.+++.+.+  .++.+++.+....   +..|+|||
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            67899999999999873 4689999997654321  123568899999999976  4467788776654   36789999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHS-------------------------------------------  127 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~-------------------------------------------  127 (472)
                      |++|.++.+.+..+.+++.....++.+++.+|..||+                                           
T Consensus        81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            9999988876654568888888888899999988884                                           


Q ss_pred             -------------CCceecCCCCCcEEEcC--CCCEEEeeccchh
Q 012021          128 -------------RGVCHRDLKPENLLLDE--HGNLKVSDFGLSA  157 (472)
Q Consensus       128 -------------~giiHrDlKp~NILld~--~g~vkl~DFGla~  157 (472)
                                   ..++|+|++|.||+++.  ++.+.|+||+.+.
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                         23689999999999998  5668999999765


No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25  E-value=6.3e-11  Score=106.77  Aligned_cols=134  Identities=21%  Similarity=0.298  Sum_probs=101.9

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhh-----HHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEE
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGM-----IDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVME   90 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~-----~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E   90 (472)
                      ..+++|+-+.+|.+..  -|..+++|.=.+........     ..+-.+|+.++..++--.|.-.+=+..+.....++||
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            4578999999999865  45556777643333222222     3456789999988876666655556667777889999


Q ss_pred             ecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhh
Q 012021           91 YVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        91 ~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~  158 (472)
                      |++|..|.+.+...      ...++..+-.-+.-||..||+|+||.++||++...+ +.++||||+..
T Consensus        80 ~I~G~~lkd~l~~~------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99998888888765      245677778888899999999999999999997665 99999999874


No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.20  E-value=2e-10  Score=103.17  Aligned_cols=144  Identities=19%  Similarity=0.252  Sum_probs=109.5

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchh-----hHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEE
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVG-----MIDQIKREISVMRLVRHPNVVELYEVMASKTKIYFV   88 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~-----~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV   88 (472)
                      .+..|-+|+-+.|+.+..  .|+...||.=.......+.     ...+.++|+.+|.++.--.|.-..=++.+...-.++
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            668899999999999987  8888888864333322222     235678899999888766666656666677777899


Q ss_pred             EEecCC-Ccccchhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC---EEEeeccchhhh
Q 012021           89 MEYVKG-GELFGKVAK---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN---LKVSDFGLSALA  159 (472)
Q Consensus        89 ~E~~~g-g~L~~~i~~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~---vkl~DFGla~~~  159 (472)
                      |||++| .++.+++..   ..........++++|-+.+.-||.++|+|+||..+||+|..+|.   +.++|||++...
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            999988 466666643   22333334789999999999999999999999999999977663   589999997643


No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.16  E-value=4.8e-10  Score=114.39  Aligned_cols=210  Identities=16%  Similarity=0.251  Sum_probs=155.9

Q ss_pred             CeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCeeeEEEEEEe----CCEEEEEEEecCC-Ccc
Q 012021           23 FAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVVELYEVMAS----KTKIYFVMEYVKG-GEL   97 (472)
Q Consensus        23 fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----~~~~~lV~E~~~g-g~L   97 (472)
                      -.+.|++....+|..|++|.++-.+....   ...-.-+++++.+.|+|+|++.++|.+    +..+++|++|.++ ++|
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence            35789999999999999999954433221   122244678899999999999999863    4579999999987 466


Q ss_pred             cchh----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021           98 FGKV----------------AKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus        98 ~~~i----------------~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      .++-                ...+.+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+-+++|+..|+..+...
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            5542                113578999999999999999999999999999999999999999999998887665543


Q ss_pred             ccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCC-CCCCcHHHH-HHHHhccCCCCCCCCCHHH
Q 012021          162 KHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLP-FHDSNLMEM-YRKIGKAEFKFPNWFAPEV  239 (472)
Q Consensus       162 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~P-f~~~~~~~~-~~~i~~~~~~~~~~~s~~l  239 (472)
                      ..              .+  -+...    .+-|.=.||.+++.|.||..- |........ ...       +...++.++
T Consensus       446 d~--------------~~--~le~~----Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~-------I~~~yS~D~  498 (655)
T KOG3741|consen  446 DP--------------TE--PLESQ----QQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR-------ITTTYSTDL  498 (655)
T ss_pred             CC--------------Cc--chhHH----hhhhHHHHHHHHHHHhhcccccccccchHHHHHHH-------hhhhhhHHH
Confidence            22              01  11111    356888999999999999654 222222222 222       234478899


Q ss_pred             HHHHhcccCCCCCCcCChhhhhcC
Q 012021          240 RRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       240 ~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      +++|.-+...++.. -++.+++.+
T Consensus       499 rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  499 RNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHHHHHhcCccc-ccHHHHHHH
Confidence            99999999998887 788888764


No 449
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.14  E-value=2.8e-10  Score=104.94  Aligned_cols=128  Identities=23%  Similarity=0.368  Sum_probs=85.6

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccc-----------------------ccchhhHHHHHHHHHHHHhcCCC--CeeeEEEEE
Q 012021           25 KVHYARNLKTGMSVAIKIIDKEK-----------------------VLKVGMIDQIKREISVMRLVRHP--NVVELYEVM   79 (472)
Q Consensus        25 ~Vy~a~~~~~g~~vAiK~i~~~~-----------------------~~~~~~~~~~~~Ei~il~~l~hp--nIv~l~~~~   79 (472)
                      .||.|.. .+|..+|+|+.....                       ....-.....++|..+|..+..-  ++.+++++.
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            4899987 578899999974310                       01111235678999999999865  566777553


Q ss_pred             EeCCEEEEEEEecC--CCcccchhccCCCCHHHHHHHHHHHHHHHHH-HHhCCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021           80 ASKTKIYFVMEYVK--GGELFGKVAKGKLKEDAARKYFQQLISAVDY-CHSRGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus        80 ~~~~~~~lV~E~~~--gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~y-LH~~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                          ..++||||+.  |..+. .+....++......++.+++..+.. +|..||+|+||.+.|||++++ .+.|+|||.+
T Consensus        80 ----~~~ivME~I~~~G~~~~-~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qa  153 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLP-RLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQA  153 (188)
T ss_dssp             ----TTEEEEE--EETTEEGG-CHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred             ----CCEEEEEecCCCccchh-hHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcc
Confidence                2379999998  54453 3433333355667788888885555 579999999999999999887 8999999976


Q ss_pred             hhh
Q 012021          157 ALA  159 (472)
Q Consensus       157 ~~~  159 (472)
                      ...
T Consensus       154 v~~  156 (188)
T PF01163_consen  154 VDS  156 (188)
T ss_dssp             EET
T ss_pred             eec
Confidence            643


No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.10  E-value=4.5e-11  Score=125.75  Aligned_cols=153  Identities=20%  Similarity=0.379  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHhC-CceecCCCCCcEEEcCCCCEEEeeccchhhhhcccC------C-CccccccCCCcccChhhhcccCC
Q 012021          117 QLISAVDYCHSR-GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQ------D-GLLHTTCGTPAYVAPEVINRRGY  188 (472)
Q Consensus       117 ql~~aL~yLH~~-giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~------~-~~~~~~~gt~~y~aPE~~~~~~~  188 (472)
                      +.++|+.|+|.. +++|+.|.|++|.++.+|.+||+.|+.+........      + ....-..-...|.|||++.. ..
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~  185 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT  185 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence            344899999966 899999999999999999999999998765433111      0 01111124567999999877 45


Q ss_pred             CCCcccchhhhHHHHHHh-cCCCCCCCCcHHHHHHHH----hccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcC
Q 012021          189 DGSKADIWSCGVILYVLL-AGYLPFHDSNLMEMYRKI----GKAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMEN  263 (472)
Q Consensus       189 ~~~~~DiwSlGvil~~ll-tG~~Pf~~~~~~~~~~~i----~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h  263 (472)
                      .+.++|+||+|+++|.+. .|+.-+...+....+..-    ....+.....+++++++-+.++|..++..||++.+++..
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI  265 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc
Confidence            568999999999999999 455555444333222221    112334456789999999999999999999999999999


Q ss_pred             cccccCC
Q 012021          264 SWFRKGL  270 (472)
Q Consensus       264 ~~f~~~~  270 (472)
                      |||....
T Consensus       266 ~ff~D~~  272 (700)
T KOG2137|consen  266 PFFSDPG  272 (700)
T ss_pred             cccCCch
Confidence            9998754


No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.04  E-value=4.1e-09  Score=102.80  Aligned_cols=131  Identities=17%  Similarity=0.093  Sum_probs=93.6

Q ss_pred             EEEEEEEcCCCcEEEEEEeeccccc---ch-----hhHHHHHHHHHHHHhcCCCCe--eeEEEEEEe-----CCEEEEEE
Q 012021           25 KVHYARNLKTGMSVAIKIIDKEKVL---KV-----GMIDQIKREISVMRLVRHPNV--VELYEVMAS-----KTKIYFVM   89 (472)
Q Consensus        25 ~Vy~a~~~~~g~~vAiK~i~~~~~~---~~-----~~~~~~~~Ei~il~~l~hpnI--v~l~~~~~~-----~~~~~lV~   89 (472)
                      .|+....  .|+.|.||........   +.     .-.....+|...+..+..-+|  +.++.+.+.     ....|+||
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt  114 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT  114 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence            3555433  6778999976432211   00     001136789998888754333  344445433     23578999


Q ss_pred             EecCCC-cccchhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcC-------CCCEEEeeccchh
Q 012021           90 EYVKGG-ELFGKVA---KGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDE-------HGNLKVSDFGLSA  157 (472)
Q Consensus        90 E~~~gg-~L~~~i~---~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~-------~g~vkl~DFGla~  157 (472)
                      |++++. +|.+++.   ....++.....++.+++..+.-||..||+|+|++|.|||++.       ++.+.++||+.+.
T Consensus       115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            999886 7888775   345677888899999999999999999999999999999975       4579999999764


No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.00  E-value=2.7e-09  Score=101.72  Aligned_cols=137  Identities=23%  Similarity=0.319  Sum_probs=103.4

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccc-----------c------cc--hhhHHHHHHHHHHHHhcCCC--
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEK-----------V------LK--VGMIDQIKREISVMRLVRHP--   70 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~-----------~------~~--~~~~~~~~~Ei~il~~l~hp--   70 (472)
                      +.++..||.|.-|.||.|.+ ..|..+|||.=....           .      ..  .-.....++|..+|.+|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            35789999999999999997 478999999742110           0      00  01134567899999999644  


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEE
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKV  150 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl  150 (472)
                      .+.+.+++    +...+||||++|-.|...-    ++......++..|++-+.-.-..|++|+|+.+-||+++++|.+.+
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~v  243 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRLR----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVV  243 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeeccc----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEE
Confidence            77777765    5678999999998876543    234555566667777776666899999999999999999999999


Q ss_pred             eeccchh
Q 012021          151 SDFGLSA  157 (472)
Q Consensus       151 ~DFGla~  157 (472)
                      +||--+.
T Consensus       244 IDwPQ~v  250 (304)
T COG0478         244 IDWPQAV  250 (304)
T ss_pred             EeCcccc
Confidence            9996443


No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.84  E-value=4.5e-08  Score=97.96  Aligned_cols=232  Identities=20%  Similarity=0.251  Sum_probs=149.3

Q ss_pred             EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh-cCCCCeee--------EEEEEEeCC
Q 012021           13 ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRL-VRHPNVVE--------LYEVMASKT   83 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~--------l~~~~~~~~   83 (472)
                      ..++.||+|+-+.+|-.-..  +. .+-|+..+.....     +. +....|.. -.||-+-.        ++|- ....
T Consensus        14 ~~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pppa~-----~a-qk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~   83 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPPAA-----QA-QKVAELAATPDAPLLNYRVAWPQATLHGG-RRGK   83 (637)
T ss_pred             CCCccccCCccceeeecchh--hc-hhheeecCCCchH-----HH-HHHHHhccCCCCcchhhhhcccHHHhhCC-Cccc
Confidence            35688999999999865432  22 3447776554211     11 12222322 24554332        1221 1222


Q ss_pred             EEEEEEEecCCCcc-cchhc----c---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccc
Q 012021           84 KIYFVMEYVKGGEL-FGKVA----K---GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGL  155 (472)
Q Consensus        84 ~~~lV~E~~~gg~L-~~~i~----~---~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGl  155 (472)
                      .+-+.|..+.|..= ..+..    +   ....+..+.+.++.|+.+...||..|..-+|+.++|+|+++++.+.|.|=..
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs  163 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDS  163 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccc
Confidence            37788998888532 22221    1   2367889999999999999999999999999999999999999999998542


Q ss_pred             hhhhhcccCCCccccccCCCcccChhhhcccCCC----CCcccchhhhHHHHHHhcC-CCCCCCC-------cHHHHHHH
Q 012021          156 SALAESKHQDGLLHTTCGTPAYVAPEVINRRGYD----GSKADIWSCGVILYVLLAG-YLPFHDS-------NLMEMYRK  223 (472)
Q Consensus       156 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----~~~~DiwSlGvil~~lltG-~~Pf~~~-------~~~~~~~~  223 (472)
                      -.+   ...+......+|.+.|.+||...-..+.    +...|.|.||+++|+++.| ++||.+.       +..+  ..
T Consensus       164 fqi---~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E--~~  238 (637)
T COG4248         164 FQI---NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE--TD  238 (637)
T ss_pred             eee---ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch--hh
Confidence            211   1223334456799999999986422211    3568999999999998886 9999652       2222  12


Q ss_pred             HhccCC-----------CCC---CC--CCHHHHHHHhcccCC--CCCCcCChhh
Q 012021          224 IGKAEF-----------KFP---NW--FAPEVRRLLSKILDP--NPNTRISMTK  259 (472)
Q Consensus       224 i~~~~~-----------~~~---~~--~s~~l~~li~~~L~~--dP~~Rpt~~e  259 (472)
                      |..+.+           +-|   +|  +++++..|..+|+..  ++.-|||++.
T Consensus       239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            221111           111   11  678999999998864  3668998763


No 454
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.79  E-value=8.5e-08  Score=90.07  Aligned_cols=104  Identities=21%  Similarity=0.367  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHhcCCCC--eeeEEEEEEeC----CEEEEEEEecCCC-cccchhcc-CCCCHHHHHHHHHHHHHHHHHHH
Q 012021           55 DQIKREISVMRLVRHPN--VVELYEVMASK----TKIYFVMEYVKGG-ELFGKVAK-GKLKEDAARKYFQQLISAVDYCH  126 (472)
Q Consensus        55 ~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~----~~~~lV~E~~~gg-~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH  126 (472)
                      ....+|...+..|..-+  .++++++.+..    ...|+|+|+++|. +|.+++.. ..++......++.+++..+.-||
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            46788888888775333  34556655442    3568999999885 78888865 34777888899999999999999


Q ss_pred             hCCceecCCCCCcEEEcCCC---CEEEeeccchhh
Q 012021          127 SRGVCHRDLKPENLLLDEHG---NLKVSDFGLSAL  158 (472)
Q Consensus       127 ~~giiHrDlKp~NILld~~g---~vkl~DFGla~~  158 (472)
                      .+||+|+|++|.|||++.++   .+.++||+-+..
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            99999999999999999887   899999986553


No 455
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.79  E-value=1.3e-07  Score=88.50  Aligned_cols=141  Identities=20%  Similarity=0.290  Sum_probs=96.2

Q ss_pred             cccCCeEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHH------HHHHHHHHHHhcC---CCCeeeEEE
Q 012021            7 ILMQRYELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMID------QIKREISVMRLVR---HPNVVELYE   77 (472)
Q Consensus         7 ~l~~~y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~------~~~~Ei~il~~l~---hpnIv~l~~   77 (472)
                      ++.++|.+.+.+-......|.+..-  +|+.+++|.........+....      ...+.+..+..+.   -..+..++-
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            6778999999999988888876654  7899999998654432222111      1233444344432   233333333


Q ss_pred             EE-----EeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEee
Q 012021           78 VM-----ASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSD  152 (472)
Q Consensus        78 ~~-----~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~D  152 (472)
                      +.     .-....+++|||++|.+|.+...   +++    .+...|.+++.-+|+.|++|+|..|.|+++..++ ++++|
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~---i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID  177 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED---IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIID  177 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh---cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEE
Confidence            32     22345668999999988866532   333    2446678889999999999999999999998655 99999


Q ss_pred             ccchh
Q 012021          153 FGLSA  157 (472)
Q Consensus       153 FGla~  157 (472)
                      |+..+
T Consensus       178 ~~~k~  182 (229)
T PF06176_consen  178 TQGKR  182 (229)
T ss_pred             Ccccc
Confidence            98543


No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.71  E-value=2e-07  Score=86.96  Aligned_cols=137  Identities=15%  Similarity=0.142  Sum_probs=98.9

Q ss_pred             cccCCeEEEEEEEcCCCcEEEEEEeecccc--cc-hhhHHHHHHHHHHHHhcCCCC--eeeEEEEEEe----CCEEEEEE
Q 012021           19 GQGTFAKVHYARNLKTGMSVAIKIIDKEKV--LK-VGMIDQIKREISVMRLVRHPN--VVELYEVMAS----KTKIYFVM   89 (472)
Q Consensus        19 G~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~--~~-~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~----~~~~~lV~   89 (472)
                      |.||-+.|+....  .|+.+=+|.-...-.  .. ..-...+.+|+..|+.|..-+  +.++......    .-..+||+
T Consensus        27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            5588889988765  455677887531110  00 122467889999998885322  4444422111    23478999


Q ss_pred             EecCC-CcccchhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCC--EEEeeccchh
Q 012021           90 EYVKG-GELFGKVAKG---KLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGN--LKVSDFGLSA  157 (472)
Q Consensus        90 E~~~g-g~L~~~i~~~---~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~--vkl~DFGla~  157 (472)
                      |-+.| -+|.+++..+   +.++.....++.+++..+.-||+.|+.|+|+.+.|||++.+|.  ++++||.-++
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            98865 4788887653   4577888899999999999999999999999999999997777  9999997544


No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.59  E-value=9.8e-07  Score=83.59  Aligned_cols=138  Identities=18%  Similarity=0.207  Sum_probs=99.9

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccc---------------------hhhHHHHHHHHHHHHhcC--CCCee
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK---------------------VGMIDQIKREISVMRLVR--HPNVV   73 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~---------------------~~~~~~~~~Ei~il~~l~--hpnIv   73 (472)
                      .|+.|--+.||+|.. .++..+|+|++......-                     .-......+|+..|+++.  +-.+.
T Consensus        55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP  133 (268)
T COG1718          55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP  133 (268)
T ss_pred             eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            556677778999985 678999999985422110                     011234567888888875  45566


Q ss_pred             eEEEEEEeCCEEEEEEEecCCC-cccchhccCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEcCCCCEEEe
Q 012021           74 ELYEVMASKTKIYFVMEYVKGG-ELFGKVAKGKLKEDAARKYFQQLISAVDYCHS-RGVCHRDLKPENLLLDEHGNLKVS  151 (472)
Q Consensus        74 ~l~~~~~~~~~~~lV~E~~~gg-~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~-~giiHrDlKp~NILld~~g~vkl~  151 (472)
                      +.+.+..    -.|||||+... .-.-.++.-++...++..+..++++.+.-|-. .|++|+||+.-|||+. ++.+.|+
T Consensus       134 ~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iI  208 (268)
T COG1718         134 EPIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYII  208 (268)
T ss_pred             CceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEE
Confidence            7777653    47999999553 12223333345555788899999999998877 8999999999999999 8899999


Q ss_pred             eccchhhhh
Q 012021          152 DFGLSALAE  160 (472)
Q Consensus       152 DFGla~~~~  160 (472)
                      |||-|....
T Consensus       209 D~~QaV~~~  217 (268)
T COG1718         209 DVSQAVTID  217 (268)
T ss_pred             ECccccccC
Confidence            999776544


No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.58  E-value=8.4e-07  Score=84.57  Aligned_cols=132  Identities=15%  Similarity=0.153  Sum_probs=84.5

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEEEEEEeCCEEEEEEEecC
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELYEVMASKTKIYFVMEYVK   93 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~~~~~lV~E~~~   93 (472)
                      ..||+|..+.||+.    .|..+++|......     ....+.+|.++++.+..-.  +.+.+++.+..+...+|||+++
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence            56899999999973    35567889875432     2345789999999986443  4778888888888899999999


Q ss_pred             CCc-ccch---------------------hcc---CCCCHHH-HHHHHHHH----------HH-HHHHHH----hCCcee
Q 012021           94 GGE-LFGK---------------------VAK---GKLKEDA-ARKYFQQL----------IS-AVDYCH----SRGVCH  132 (472)
Q Consensus        94 gg~-L~~~---------------------i~~---~~l~e~~-~~~i~~ql----------~~-aL~yLH----~~giiH  132 (472)
                      |.. +...                     +..   ...+... ..++..++          .. ...+|.    ...++|
T Consensus        78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H  157 (226)
T TIGR02172        78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH  157 (226)
T ss_pred             CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence            963 1100                     111   0011000 00111111          11 111222    124789


Q ss_pred             cCCCCCcEEEcCCCCEEEeeccchh
Q 012021          133 RDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       133 rDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      +|+.|.||++++++ +.|+||+.+.
T Consensus       158 gD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       158 GDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             cCCCCCcEEEcCCC-cEEEechhcC
Confidence            99999999999888 9999999765


No 459
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.56  E-value=8.5e-07  Score=83.71  Aligned_cols=136  Identities=21%  Similarity=0.299  Sum_probs=82.6

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCC--CeeeEEEEE---EeCCEEEEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHP--NVVELYEVM---ASKTKIYFVM   89 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp--nIv~l~~~~---~~~~~~~lV~   89 (472)
                      ++.|+.|..+.||++....  ..+++|.....     .....+.+|..+++.+...  .+.+++...   ......+++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~   74 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence            5789999999999998743  59999997544     2346788999999888533  355666644   3344689999


Q ss_pred             EecCCCcccc----------------hhc---c-----CCCCHHH---------HHHH------------HHHHHH-HHH
Q 012021           90 EYVKGGELFG----------------KVA---K-----GKLKEDA---------ARKY------------FQQLIS-AVD  123 (472)
Q Consensus        90 E~~~gg~L~~----------------~i~---~-----~~l~e~~---------~~~i------------~~ql~~-aL~  123 (472)
                      ++++|..+..                .+.   .     ..+....         ....            ...+.. .+.
T Consensus        75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (239)
T PF01636_consen   75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ  154 (239)
T ss_dssp             EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence            9999987766                110   0     0011000         0000            111222 233


Q ss_pred             HHHh-------CCceecCCCCCcEEEc-CCCCEEEeeccchh
Q 012021          124 YCHS-------RGVCHRDLKPENLLLD-EHGNLKVSDFGLSA  157 (472)
Q Consensus       124 yLH~-------~giiHrDlKp~NILld-~~g~vkl~DFGla~  157 (472)
                      .+++       ..++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus       155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            3332       3699999999999999 66777899998654


No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54  E-value=4.7e-07  Score=95.65  Aligned_cols=143  Identities=20%  Similarity=0.266  Sum_probs=94.5

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccc---------------------------cch----hhHHH------HH
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKV---------------------------LKV----GMIDQ------IK   58 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~---------------------------~~~----~~~~~------~~   58 (472)
                      +-|+.++-|.||.|+. .+|+.||||+....-.                           .-.    +..+.      +.
T Consensus       131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            5688999999999997 4699999999754210                           000    11122      23


Q ss_pred             HHHHHHHhc-----CCCCeeeEEEEEEeCCEEEEEEEecCCCcccchh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 012021           59 REISVMRLV-----RHPNVVELYEVMASKTKIYFVMEYVKGGELFGKV--AKGKLKEDAARKYFQQLISAVDYCHSRGVC  131 (472)
Q Consensus        59 ~Ei~il~~l-----~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i--~~~~l~e~~~~~i~~ql~~aL~yLH~~gii  131 (472)
                      +|...+.++     +.|++.-..=+++-.+.-.++|||+.|-.+.+..  ...+++...+...+.++  -+..+=..|++
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~--f~~q~~~dgff  287 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRA--FLRQLLRDGFF  287 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHH--HHHHHHhcCcc
Confidence            444444444     2466555555556667789999999999888874  44455533322221111  12222348999


Q ss_pred             ecCCCCCcEEEcCCCCEEEeeccchhhhhc
Q 012021          132 HRDLKPENLLLDEHGNLKVSDFGLSALAES  161 (472)
Q Consensus       132 HrDlKp~NILld~~g~vkl~DFGla~~~~~  161 (472)
                      |.|.+|.||+++.+|.+.+.|||+......
T Consensus       288 HaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         288 HADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            999999999999999999999998765443


No 461
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.42  E-value=5.1e-08  Score=102.09  Aligned_cols=237  Identities=20%  Similarity=0.193  Sum_probs=165.5

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCCEEEEEEE
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN-VVELYEVMASKTKIYFVME   90 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E   90 (472)
                      |....-+++|+++++++.+...+...+ .+.+...        ....-++++|.+++||| .+..++-++.+...+++++
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~  314 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR  314 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence            455667899999999999986665444 6665433        34556889999999999 7777777888889999999


Q ss_pred             ecCCC-cccchhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCc
Q 012021           91 YVKGG-ELFGKVAK--GKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGL  167 (472)
Q Consensus        91 ~~~gg-~L~~~i~~--~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~  167 (472)
                      ++.++ +-......  -.+.+-+.....+.-..+++++|+.-=+|||    ||+..+ +..+..||+.........   .
T Consensus       315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~  386 (829)
T KOG0576|consen  315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---K  386 (829)
T ss_pred             hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc---c
Confidence            99887 33222211  2344445556666778899999998778998    777655 678999999876554332   2


Q ss_pred             cccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCCCCcHHHHHHHHhccC--CCC---CCCCCHHHHHH
Q 012021          168 LHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFHDSNLMEMYRKIGKAE--FKF---PNWFAPEVRRL  242 (472)
Q Consensus       168 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~~~~~~~~~~~i~~~~--~~~---~~~~s~~l~~l  242 (472)
                      ..+..+|+.++|||+.....+. ...|.|++|.--.++.-|.+|-....  .....+..+.  +.+   ..|-+.+-+++
T Consensus       387 ~~t~~~~~~~~~pev~~~~~~~-~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~g~~p~s~~L~~~~aw~~~~~~~~  463 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEVIQENTID-GCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMIGNGPNSPMLTDKSAWSPVFHRDF  463 (829)
T ss_pred             cccCCCCCCCCCchhhcccccc-cCCCccCCCcchhhcCCCCCCCCCCc--cccCCCCCCCCccccchhhhcCcccccCC
Confidence            3567899999999998888777 68999999988778888877743311  0000011110  001   11222222347


Q ss_pred             HhcccCCCCCCcCChhhhhcCccccc
Q 012021          243 LSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       243 i~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ...|+..-|..|+.....+-|.+|..
T Consensus       464 ~~~~~~g~P~~pkv~mgacfsKvfng  489 (829)
T KOG0576|consen  464 PAPCLNGLPPTPKVHMGACFSKVFNG  489 (829)
T ss_pred             cccccCCCCCCCcchhhHHHHHHhcc
Confidence            78899999999999999988888764


No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.30  E-value=6e-06  Score=79.35  Aligned_cols=74  Identities=16%  Similarity=0.174  Sum_probs=53.6

Q ss_pred             eEcccCC-eEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCEEEEEEEecCC
Q 012021           17 LLGQGTF-AKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNVVELYEVMASKTKIYFVMEYVKG   94 (472)
Q Consensus        17 ~LG~G~f-g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~g   94 (472)
                      .|-.|.. +.||.+..  .+..+.+|+.....      ...+.+|+.+++.+. +--+.+++++....+..++|||+++|
T Consensus         5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence            4455555 78898865  34788889875432      235678999998884 44466788887777788999999999


Q ss_pred             Cccc
Q 012021           95 GELF   98 (472)
Q Consensus        95 g~L~   98 (472)
                      .+|.
T Consensus        77 ~~l~   80 (244)
T cd05150          77 VPAA   80 (244)
T ss_pred             ccHh
Confidence            7664


No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.29  E-value=1.1e-05  Score=90.97  Aligned_cols=82  Identities=20%  Similarity=0.342  Sum_probs=59.2

Q ss_pred             EEeeEcccCCeEEEEEEEcCCC--cEEEEEEeecccccchhhHHHHHHHHHHHHhcC-CCCe--eeEEEEEEeC---CEE
Q 012021           14 LGRLLGQGTFAKVHYARNLKTG--MSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-HPNV--VELYEVMASK---TKI   85 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g--~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnI--v~l~~~~~~~---~~~   85 (472)
                      -++.|+.|.++.+|+......+  ..+++|+.......  .....+.+|+.+|+.+. |+++  .+++.++.+.   +..
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~  119 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA  119 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence            3678899999999998764332  46778876543321  12356889999999995 6665  7788877654   468


Q ss_pred             EEEEEecCCCcc
Q 012021           86 YFVMEYVKGGEL   97 (472)
Q Consensus        86 ~lV~E~~~gg~L   97 (472)
                      |+||||++|..+
T Consensus       120 flVME~v~G~~~  131 (822)
T PLN02876        120 FYIMEYLEGRIF  131 (822)
T ss_pred             eEEEEecCCccc
Confidence            999999998643


No 464
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=98.24  E-value=2.1e-05  Score=73.21  Aligned_cols=130  Identities=19%  Similarity=0.295  Sum_probs=96.8

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccc-------------cchhhHHHHHHHHHHHHhcC------CCCeeeEE
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKV-------------LKVGMIDQIKREISVMRLVR------HPNVVELY   76 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~~~~~~~~~Ei~il~~l~------hpnIv~l~   76 (472)
                      ..||+|+.=.||.  + .......||+......             ......++..+|+.-...+.      +.+|.+++
T Consensus         7 ~~i~~G~~R~cy~--H-P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--H-PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEE--C-CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            5789999999984  3 3456688999876650             01122466777877766665      78999999


Q ss_pred             EEEEeCCEEEEEEEecCCC------cccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCC----
Q 012021           77 EVMASKTKIYFVMEYVKGG------ELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHG----  146 (472)
Q Consensus        77 ~~~~~~~~~~lV~E~~~gg------~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g----  146 (472)
                      |+.+++.-.-+|+|.+...      +|.+++..+.+++ ..   ...+-+-.+||-+++|+.+|++|.||++..++    
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~  159 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEF  159 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCce
Confidence            9999999999999987642      5777887777877 33   34455566788899999999999999996433    


Q ss_pred             CEEEee
Q 012021          147 NLKVSD  152 (472)
Q Consensus       147 ~vkl~D  152 (472)
                      .+.|+|
T Consensus       160 ~lvlID  165 (199)
T PF10707_consen  160 RLVLID  165 (199)
T ss_pred             EEEEEe
Confidence            477777


No 465
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.20  E-value=5.8e-06  Score=92.28  Aligned_cols=202  Identities=19%  Similarity=0.243  Sum_probs=139.7

Q ss_pred             HHHHHHHHHHhcCCCCeeeEEEEEEeCC----EEEEEEEecCCCcccchhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 012021           56 QIKREISVMRLVRHPNVVELYEVMASKT----KIYFVMEYVKGGELFGKVAK-GKLKEDAARKYFQQLISAVDYCHSRGV  130 (472)
Q Consensus        56 ~~~~Ei~il~~l~hpnIv~l~~~~~~~~----~~~lV~E~~~gg~L~~~i~~-~~l~e~~~~~i~~ql~~aL~yLH~~gi  130 (472)
                      ....|+..+....|+|++.++.+-....    ...+..|++..-++...+.. +..+...++.+..+++.|+.|+|+...
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l  307 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL  307 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence            3445666677889999999999864432    23355688888888888866 789999999999999999999999965


Q ss_pred             eecCCCCC---cEEEcCCCCEEEe--eccchhhhhcccCCCccccccCCCcccChhhhcccCCC-CCcccchhhhHHHHH
Q 012021          131 CHRDLKPE---NLLLDEHGNLKVS--DFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYD-GSKADIWSCGVILYV  204 (472)
Q Consensus       131 iHrDlKp~---NILld~~g~vkl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~DiwSlGvil~~  204 (472)
                      .|.-+...   +-..+..+.+.++  ||+.+.........   ....-+..+.+||....+.+. +...|+|.+|..+..
T Consensus       308 ~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~  384 (1351)
T KOG1035|consen  308 EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQ  384 (1351)
T ss_pred             ceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHHHHHhh
Confidence            55544444   3334455566666  88876655433221   223345667888877655443 224699999999999


Q ss_pred             HhcCCCCCCCCcHHHHHHHHhccCCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccC
Q 012021          205 LLAGYLPFHDSNLMEMYRKIGKAEFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKG  269 (472)
Q Consensus       205 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~  269 (472)
                      +..|..+-.......   .+      .+.....+..++..+|+..++++|+++.+++.|+|.+..
T Consensus       385 ~~~~~~i~~~~~~~~---~~------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  385 LSQGEDISEKSAVPV---SL------LDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hhhcCcccccccchh---hh------hccccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence            988865521111100   00      111112267889999999999999999999999998753


No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.17  E-value=1.2e-05  Score=72.46  Aligned_cols=129  Identities=21%  Similarity=0.316  Sum_probs=93.8

Q ss_pred             EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCee-eEEEEEEeCCEEEEEEEe
Q 012021           13 ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNVV-ELYEVMASKTKIYFVMEY   91 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv-~l~~~~~~~~~~~lV~E~   91 (472)
                      ++.+.||+|++|.||++..  .|..+|+|+-..+.     ....+..|+.+|..+.--++. ++|.+..    .++.|||
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~   93 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEY   93 (201)
T ss_pred             hhhhhhhcccccEEEEeec--cCceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhh
Confidence            3567899999999999998  67799999865443     346789999999999876664 5665543    3455999


Q ss_pred             cCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC-CCcEEEcCCCCEEEeeccchhh
Q 012021           92 VKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLK-PENLLLDEHGNLKVSDFGLSAL  158 (472)
Q Consensus        92 ~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlK-p~NILld~~g~vkl~DFGla~~  158 (472)
                      +.|-+|......+  +    ++-+..+++.-.-|-..||-|..|. |..++|-.++.+.|+||.-|+.
T Consensus        94 i~G~~L~~~~~~~--~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          94 IDGRPLGKLEIGG--D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hcCcchhhhhhcc--c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            9998876554332  2    2334456666556667799999987 5555555566999999997774


No 467
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=98.16  E-value=3.7e-05  Score=71.28  Aligned_cols=128  Identities=20%  Similarity=0.254  Sum_probs=90.3

Q ss_pred             CCeEEEeeEcccCC-eEEEEEEEcCCCcEEEEEEeec---c-------cccch--------hhHHHHHHHHHHHHhc---
Q 012021           10 QRYELGRLLGQGTF-AKVHYARNLKTGMSVAIKIIDK---E-------KVLKV--------GMIDQIKREISVMRLV---   67 (472)
Q Consensus        10 ~~y~i~~~LG~G~f-g~Vy~a~~~~~g~~vAiK~i~~---~-------~~~~~--------~~~~~~~~Ei~il~~l---   67 (472)
                      ..++.++.||.|+- |.||+++-  .|+.+|+|++..   .       .....        ...+-+..|.+..-+|   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            68999999999999 99999987  788999999421   0       00000        1234567777776555   


Q ss_pred             CCCCe--eeEEEEEEeC------------------CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHh
Q 012021           68 RHPNV--VELYEVMASK------------------TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHS  127 (472)
Q Consensus        68 ~hpnI--v~l~~~~~~~------------------~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~  127 (472)
                      .+.++  |+.+|++.-.                  ....||.||++...        .+    ..+-+.+|.+-+..+|.
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~~----~~~~~~~~~~dl~~~~k  182 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------PL----QIRDIPQMLRDLKILHK  182 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------cc----chhHHHHHHHHHHHHHH
Confidence            46667  9999997221                  12356777765543        12    23345678888899999


Q ss_pred             CCceecCCCCCcEEEcCCCCEEEeeccch
Q 012021          128 RGVCHRDLKPENLLLDEHGNLKVSDFGLS  156 (472)
Q Consensus       128 ~giiHrDlKp~NILld~~g~vkl~DFGla  156 (472)
                      .||+-+|+++.|..   +  =+|+|||.+
T Consensus       183 ~gI~~~Dv~~~ny~---~--G~lvDfs~~  206 (207)
T PF13095_consen  183 LGIVPRDVKPRNYR---G--GKLVDFSSS  206 (207)
T ss_pred             CCeeeccCcccccc---C--CEEEecccC
Confidence            99999999999985   3  389999853


No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.06  E-value=2.8e-05  Score=74.42  Aligned_cols=73  Identities=10%  Similarity=0.073  Sum_probs=47.0

Q ss_pred             eeEcccCCe-EEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCC---CeeeEEEEEEeC---CEEEEE
Q 012021           16 RLLGQGTFA-KVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHP---NVVELYEVMASK---TKIYFV   88 (472)
Q Consensus        16 ~~LG~G~fg-~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~~~---~~~~lV   88 (472)
                      +.|+.|+.. .||...     ..+++|+.....     ....+.+|..+|+.+...   -+.++++.....   ...|++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l   72 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV   72 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence            567777776 488652     357778754321     235788999999888532   344555544332   245899


Q ss_pred             EEecCCCccc
Q 012021           89 MEYVKGGELF   98 (472)
Q Consensus        89 ~E~~~gg~L~   98 (472)
                      |++++|.++.
T Consensus        73 ~~~i~G~~l~   82 (235)
T cd05155          73 YRWLEGETAT   82 (235)
T ss_pred             EEeecCCCCC
Confidence            9999997663


No 469
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.06  E-value=2.3e-05  Score=82.76  Aligned_cols=141  Identities=21%  Similarity=0.276  Sum_probs=89.8

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc----------------------------hhhHHHHHHHHHHH---
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK----------------------------VGMIDQIKREISVM---   64 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~----------------------------~~~~~~~~~Ei~il---   64 (472)
                      +.||.-+.|.||.|+-+ +|+.||||+-++.-...                            .+..+.+..|++.+   
T Consensus       167 ~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            67899999999999975 59999999964321000                            01122222333222   


Q ss_pred             -------HhcCCCC------eeeEEEEEEeCCEEEEEEEecCCCcccch--hccCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 012021           65 -------RLVRHPN------VVELYEVMASKTKIYFVMEYVKGGELFGK--VAKGKLKEDAARKYFQQLISAVDYCHSRG  129 (472)
Q Consensus        65 -------~~l~hpn------Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~--i~~~~l~e~~~~~i~~ql~~aL~yLH~~g  129 (472)
                             +.+.|-+      |.++|-  .-.+...|+|||++|..+.|.  +.+.+++...+...+.+...  .-+-..|
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~G  321 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTG  321 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcC
Confidence                   2223444      333333  334567899999999877654  45566766654433333222  2223468


Q ss_pred             ceecCCCCCcEEEcC----CCCEEEeeccchhhhhc
Q 012021          130 VCHRDLKPENLLLDE----HGNLKVSDFGLSALAES  161 (472)
Q Consensus       130 iiHrDlKp~NILld~----~g~vkl~DFGla~~~~~  161 (472)
                      ++|.|-+|.||++..    ++.+.+-|||+......
T Consensus       322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            999999999999984    66899999998775543


No 470
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.92  E-value=5.5e-05  Score=69.97  Aligned_cols=99  Identities=20%  Similarity=0.293  Sum_probs=81.5

Q ss_pred             HHHHHHHHhcCC-CCeeeEEEEEEeCCEEEEEEEecCCCcccch----hccCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q 012021           58 KREISVMRLVRH-PNVVELYEVMASKTKIYFVMEYVKGGELFGK----VAKGKLKEDAARKYFQQLISAVDYCHS---RG  129 (472)
Q Consensus        58 ~~Ei~il~~l~h-pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~----i~~~~l~e~~~~~i~~ql~~aL~yLH~---~g  129 (472)
                      ..|.-+|+.+.+ +++++++|+|-    .++|.||...+++...    ..-...++....+++.++++.+.+++.   ..
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            468889999976 69999999984    3678899987766532    122357899999999999999999997   45


Q ss_pred             ceecCCCCCcEEEcCCCCEEEeeccchhhhh
Q 012021          130 VCHRDLKPENLLLDEHGNLKVSDFGLSALAE  160 (472)
Q Consensus       130 iiHrDlKp~NILld~~g~vkl~DFGla~~~~  160 (472)
                      +.-.|++|+|+-++++|++|++|...+....
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            8899999999999999999999998765543


No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.84  E-value=0.00041  Score=68.94  Aligned_cols=78  Identities=9%  Similarity=0.085  Sum_probs=56.5

Q ss_pred             EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCC---CCeeeEEEEEEe---CCEEE
Q 012021           13 ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRH---PNVVELYEVMAS---KTKIY   86 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h---pnIv~l~~~~~~---~~~~~   86 (472)
                      .-.+.||.|..+.||....  .+..+.+|... ...    ....+.+|...|+.+..   -.+.++++++..   .+..|
T Consensus        17 ~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~-~~~----~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~   89 (297)
T PRK10593         17 SRVECISEQPYAALWALYD--SQGNPMPLMAR-SFS----TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV   89 (297)
T ss_pred             heeeecCCccceeEEEEEc--CCCCEEEEEec-ccc----cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence            4457899999999998864  23356777743 211    12578899999998853   367888887754   36789


Q ss_pred             EEEEecCCCcc
Q 012021           87 FVMEYVKGGEL   97 (472)
Q Consensus        87 lV~E~~~gg~L   97 (472)
                      +|||+++|.++
T Consensus        90 LVmE~i~G~~~  100 (297)
T PRK10593         90 LLLERLRGVSV  100 (297)
T ss_pred             EEEeccCCEec
Confidence            99999998755


No 472
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.83  E-value=0.0003  Score=72.46  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=55.6

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc--c--hhhHHHHHHHHHHHHhcC---CCCeeeEEEEEEeCCEEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL--K--VGMIDQIKREISVMRLVR---HPNVVELYEVMASKTKIYF   87 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--~--~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~l   87 (472)
                      .+.||.|.+..||.+.+...++.|+||.-......  .  .-..++...|...|+.+.   -.++++++.+  +.+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            47899999999999998544468999985422110  0  123467788888888763   3457777777  4455789


Q ss_pred             EEEecCCC
Q 012021           88 VMEYVKGG   95 (472)
Q Consensus        88 V~E~~~gg   95 (472)
                      ||||+++.
T Consensus       109 VME~L~~~  116 (401)
T PRK09550        109 VMEDLSDH  116 (401)
T ss_pred             EEecCCCc
Confidence            99999874


No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.81  E-value=0.00021  Score=68.07  Aligned_cols=75  Identities=19%  Similarity=0.314  Sum_probs=49.2

Q ss_pred             EeeEcccCCeEEEEEEEcC-CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCCEEEEEEEec
Q 012021           15 GRLLGQGTFAKVHYARNLK-TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN-VVELYEVMASKTKIYFVMEYV   92 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E~~   92 (472)
                      ++.|..|-...+|++.... .++.|++|+.......    .-...+|+.+++.+...+ .++++....  +  .++|||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~----~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL----IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc----eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEee
Confidence            4677888888999987532 3678999987543211    122357899998885433 345554432  2  3799999


Q ss_pred             CCCcc
Q 012021           93 KGGEL   97 (472)
Q Consensus        93 ~gg~L   97 (472)
                      +|..+
T Consensus        75 ~G~~l   79 (235)
T cd05157          75 PGRTL   79 (235)
T ss_pred             CCCcC
Confidence            99655


No 474
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.80  E-value=8.5e-07  Score=100.54  Aligned_cols=208  Identities=17%  Similarity=0.100  Sum_probs=145.6

Q ss_pred             HHHHHHHHhcCCCCeeeEEEEEE--eCCEEEEEEEecCCCcccchhccC-----CCCHHHHHHHHHHHHHHHHHHHhC--
Q 012021           58 KREISVMRLVRHPNVVELYEVMA--SKTKIYFVMEYVKGGELFGKVAKG-----KLKEDAARKYFQQLISAVDYCHSR--  128 (472)
Q Consensus        58 ~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~lV~E~~~gg~L~~~i~~~-----~l~e~~~~~i~~ql~~aL~yLH~~--  128 (472)
                      ..|.+-++...|+++...+.-..  +....|..++|+.+|.+++.|-+|     .+.+.-+.....+.+.+..-+|+.  
T Consensus      1277 l~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tn 1356 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTN 1356 (2724)
T ss_pred             hhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhccc
Confidence            34445556678999887766553  345678999999999999998654     344555555555657888888865  


Q ss_pred             ---CceecCCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHH
Q 012021          129 ---GVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVL  205 (472)
Q Consensus       129 ---giiHrDlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~l  205 (472)
                         -.+|+++|+-|.+|..+-++++.++|+.+.....  ........+++.|++|++...-.+. .++|+|..|+-+|++
T Consensus      1357 lg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~qli~N~ik~t-~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1357 LGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQLIKNEIKFT-KRSDILRRSLSLYLR 1433 (2724)
T ss_pred             CCccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence               2789999999999999999999999998832221  1223456788999999998777765 559999999999999


Q ss_pred             hcCCCCCCCCcHHHHHHHHhcc-CCCCCCCCCHHHHHHHhcccCCCCCCcCChhhhhcCccccc
Q 012021          206 LAGYLPFHDSNLMEMYRKIGKA-EFKFPNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRK  268 (472)
Q Consensus       206 ltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~  268 (472)
                      ..|..+|.......+...+... .+..+...|.++-.....+|-..-..||.-..++.-+.|.-
T Consensus      1434 s~~n~~fi~flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1434 SDGNAYFIFFLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFAV 1497 (2724)
T ss_pred             hcccHHHHHHHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhcccccccc
Confidence            9998877433322222222222 23344444555555566666666778888887777666654


No 475
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.78  E-value=0.00015  Score=70.29  Aligned_cols=131  Identities=16%  Similarity=0.218  Sum_probs=78.0

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEEEEEEecCCC
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIYFVMEYVKGG   95 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lV~E~~~gg   95 (472)
                      .+..|-.+.+|+..  .+++.+++|+......   ...-...+|..+++.+....+ .+++....    -++||||++|.
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~   73 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCK---ALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGE   73 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccc---cccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCc
Confidence            45668888999887  3677888998644321   110124689999998864333 34444432    36899999986


Q ss_pred             cccch-----------------hccC-----CCCH-HHHHHHHHHH---------HHHHHHHHh--------CCceecCC
Q 012021           96 ELFGK-----------------VAKG-----KLKE-DAARKYFQQL---------ISAVDYCHS--------RGVCHRDL  135 (472)
Q Consensus        96 ~L~~~-----------------i~~~-----~l~e-~~~~~i~~ql---------~~aL~yLH~--------~giiHrDl  135 (472)
                      .+...                 +..-     +++. ..+..+..++         ...+..+-.        ..++|+|+
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl  153 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV  153 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence            65321                 1111     1111 1222322222         111222211        25899999


Q ss_pred             CCCcEEEcCCCCEEEeeccchh
Q 012021          136 KPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       136 Kp~NILld~~g~vkl~DFGla~  157 (472)
                      .|.||++++++ +.|+||..|.
T Consensus       154 ~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       154 HAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CcCcEEEeCCC-CEEEeccccC
Confidence            99999999877 7899998765


No 476
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.77  E-value=0.00026  Score=69.94  Aligned_cols=135  Identities=16%  Similarity=0.144  Sum_probs=83.9

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEEEE------EEeCCEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELYEV------MASKTKIY   86 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~------~~~~~~~~   86 (472)
                      .+.|..|....+|+...  ++..+++|+....      ....+..|+.+++.+.+.+  +.+++..      ....+..+
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~   90 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA   90 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence            56778888889998864  4457899987541      1256778888888875332  4454442      23456789


Q ss_pred             EEEEecCCCcccch--------------hcc--CCCCH--------HHHH------------HHHHHHHHHHHHHHh---
Q 012021           87 FVMEYVKGGELFGK--------------VAK--GKLKE--------DAAR------------KYFQQLISAVDYCHS---  127 (472)
Q Consensus        87 lV~E~~~gg~L~~~--------------i~~--~~l~e--------~~~~------------~i~~ql~~aL~yLH~---  127 (472)
                      +|++|++|..+...              +..  ..+..        ....            .....+..++.++..   
T Consensus        91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  170 (296)
T cd05153          91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP  170 (296)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence            99999999765320              000  00000        0000            011112333444443   


Q ss_pred             ----CCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021          128 ----RGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       128 ----~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                          .+++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             hcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence                479999999999999998777899998654


No 477
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.77  E-value=2.6e-05  Score=76.58  Aligned_cols=134  Identities=16%  Similarity=0.247  Sum_probs=96.6

Q ss_pred             eEEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccc-----------------cchhhHH--HHHHHHHHHHhcCC--C
Q 012021           12 YELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKV-----------------LKVGMID--QIKREISVMRLVRH--P   70 (472)
Q Consensus        12 y~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-----------------~~~~~~~--~~~~Ei~il~~l~h--p   70 (472)
                      |.++..||-|.-+.||.+.+ ..|+..++|.-.....                 ..+-.+.  ...+|+..|+.|..  -
T Consensus        94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            56899999999999999987 5788999996422110                 0011112  24578888888853  2


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEcCCCCEEE
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKV  150 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHrDlKp~NILld~~g~vkl  150 (472)
                      -+.+.+++    +..++|||++.|-.|...-.     ...+..+...++.-+--|-.+|+||+|..--||++++++.+++
T Consensus       173 pVPkpiD~----~RH~Vvmelv~g~Pl~~v~~-----v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~v  243 (465)
T KOG2268|consen  173 PVPKPIDH----NRHCVVMELVDGYPLRQVRH-----VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVV  243 (465)
T ss_pred             CCCCcccc----cceeeHHHhhcccceeeeee-----cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEE
Confidence            34455544    46789999999988765432     1123345566777777888999999999999999999999999


Q ss_pred             eeccc
Q 012021          151 SDFGL  155 (472)
Q Consensus       151 ~DFGl  155 (472)
                      +||--
T Consensus       244 IDFPQ  248 (465)
T KOG2268|consen  244 IDFPQ  248 (465)
T ss_pred             eechH
Confidence            99964


No 478
>PF02149 KA1:  Kinase associated domain 1;  InterPro: IPR001772 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. Members of the KIN2/PAR-1/MARK kinase subfamily are conserved from yeast to human and share the same domain organisation: an N-terminal kinase domain (IPR000719 from INTERPRO) and a C-terminal kinase associated domain 1 (KA1). Some members of the KIN1/PAR-1/MARK family also contain an UBA domain (IPR000449 from INTERPRO). Members of this kinase subfamily are involved in various biological processes such as cell polarity, cell cycle control, intracellular signalling, microtubule stability and protein stability []. The function of the KA1 domain is not yet known. Some proteins known to contain a KA1 domain are listed below:  Mammalian MAP/microtubule affinity-regulating kinases (MARK 1,2,3). They regulate polarity in neuronal cell models and appear to function redundantly in phosphorylating MT-associated proteins and in regulating MT stability []. Mammalian maternal embryonic leucine zipper kinase (MELK). It phosphorylates ZNF622 and may contribute to its redirection to the nucleus. It may be involved in the inhibition of spliceosome assembly during mitosis.  Caenorhabditis elegans and drosophila PAR-1 protein. It is required for establishing polarity in embryos where it is asymmetrically distributed []. Fungal Kin1 and Kin2 protein kinases involved in regulation of exocytosis. They localise to the cytoplasmic face of the plasma membrane []. Plant KIN10 and KIN11 proteins, catalytic subunits of the putative trimeric SNF1-related protein kinase (SnRK) complex.   This entry represents the KA1 domain.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3OSE_A 1V5S_A 1UL7_A.
Probab=97.77  E-value=6.3e-05  Score=52.74  Aligned_cols=42  Identities=24%  Similarity=0.390  Sum_probs=35.9

Q ss_pred             ceEEEEEEEEEEc-CceEEEEEEccCCCcHHHHHHHHHhhhhcc
Q 012021          386 GVLGMDAEIFEIT-PFFHLVEVKKSSGDTLEYQKVMNQEIRPAL  428 (472)
Q Consensus       386 ~~l~~~~~v~e~~-~~~~lve~~~~~Gd~le~~~~~~~~l~~~l  428 (472)
                      ..+.|.+||+.+. ++++.|+||+.+||...|+++|.+ |-..|
T Consensus         3 ~~v~fEieV~kl~~~~l~Gv~~kRi~Gd~~~yk~lc~~-il~~l   45 (47)
T PF02149_consen    3 EVVKFEIEVCKLPRLGLYGVDFKRISGDSWQYKDLCSK-ILNEL   45 (47)
T ss_dssp             C-EEEEEEEEEECCCTCEEEEEEEEES-HHHHHHHHHH-HHHHT
T ss_pred             cceEEEEEEEEecCCCeeEEEEEEeeCCHHHHHHHHHH-HHHHc
Confidence            4588999999997 899999999999999999999998 55544


No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.68  E-value=0.00042  Score=69.06  Aligned_cols=136  Identities=17%  Similarity=0.201  Sum_probs=81.6

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEEEE------EEeCCEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELYEV------MASKTKIY   86 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~------~~~~~~~~   86 (472)
                      .+.++.|....+|++.. .+ ..+++|+.....     ..+.+..|+.++..|...+  +.+++..      ....+..+
T Consensus        27 i~~~~~G~~n~~y~v~t-~~-~~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~   99 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTT-DV-GRYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPA   99 (307)
T ss_pred             ccccCCccccceEEEEe-CC-CcEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEE
Confidence            56677787789998864 34 467789875432     1244566777777774222  3444432      12346789


Q ss_pred             EEEEecCCCcccch--------------hcc--CCCC--------HHH-----HH----------HHHHHHHHHHHHHHh
Q 012021           87 FVMEYVKGGELFGK--------------VAK--GKLK--------EDA-----AR----------KYFQQLISAVDYCHS  127 (472)
Q Consensus        87 lV~E~~~gg~L~~~--------------i~~--~~l~--------e~~-----~~----------~i~~ql~~aL~yLH~  127 (472)
                      +++||++|..+...              +..  ..++        ...     ..          .....+...++++..
T Consensus       100 ~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~  179 (307)
T TIGR00938       100 CLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDK  179 (307)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHh
Confidence            99999998543210              110  0110        000     00          011123334555542


Q ss_pred             -------CCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021          128 -------RGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       128 -------~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                             .+++|+|+.+.||+++.++...|+||+.+.
T Consensus       180 ~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       180 FWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence                   589999999999999998877899998654


No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.61  E-value=0.00068  Score=67.54  Aligned_cols=139  Identities=21%  Similarity=0.291  Sum_probs=90.2

Q ss_pred             EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEEEEEEeCC--EEEEE
Q 012021           13 ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELYEVMASKT--KIYFV   88 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~~--~~~lV   88 (472)
                      .+++....|.--.+|...+  +++.+++. ... ...........++|+.+|+.+.---  +...++++.++.  ..|.|
T Consensus        28 ~~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v  103 (321)
T COG3173          28 LIVEEISGGWSNDTFRLGD--TGQKYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV  103 (321)
T ss_pred             ceeeeccCCcccceEEEec--CCceEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence            3444554444445666665  37888888 332 2223345677889999998875423  344555565554  67999


Q ss_pred             EEecCCCcccchhccCCCCHHHHHHHHH-HHHHHHHHHHh----------------------------------------
Q 012021           89 MEYVKGGELFGKVAKGKLKEDAARKYFQ-QLISAVDYCHS----------------------------------------  127 (472)
Q Consensus        89 ~E~~~gg~L~~~i~~~~l~e~~~~~i~~-ql~~aL~yLH~----------------------------------------  127 (472)
                      |+|++|..+.+.......+    .+++. .+++.|..||+                                        
T Consensus       104 ~~~veGe~~~~~~~~~~~~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~  179 (321)
T COG3173         104 MEWVEGEVVWSALPPESLG----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL  179 (321)
T ss_pred             EEEecceeccCcCCcccch----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence            9999996444333222222    22222 56666666664                                        


Q ss_pred             ----------C--------CceecCCCCCcEEEcCCCCEEEeeccchhhh
Q 012021          128 ----------R--------GVCHRDLKPENLLLDEHGNLKVSDFGLSALA  159 (472)
Q Consensus       128 ----------~--------giiHrDlKp~NILld~~g~vkl~DFGla~~~  159 (472)
                                +        .++|+|+.+.||+++.++-+-|.||+++.+-
T Consensus       180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence                      1        4799999999999999999999999988753


No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.47  E-value=0.001  Score=65.99  Aligned_cols=75  Identities=15%  Similarity=0.195  Sum_probs=49.3

Q ss_pred             EeeEcccCCeEEEEEEEcC------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEEE
Q 012021           15 GRLLGQGTFAKVHYARNLK------TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIYF   87 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~------~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~l   87 (472)
                      ++.|..|--..+|++....      +++.+++|+......    ......+|..+++.+...++ .++++++..    .+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~   74 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE----LLIDRERELVVFARLSERNLGPKLYGIFPN----GR   74 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc----ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence            3556667777899887533      258899999755421    12346789889888864333 455655542    35


Q ss_pred             EEEecCCCcc
Q 012021           88 VMEYVKGGEL   97 (472)
Q Consensus        88 V~E~~~gg~L   97 (472)
                      |+||++|..+
T Consensus        75 v~e~i~G~~l   84 (302)
T cd05156          75 IEEFIPSRTL   84 (302)
T ss_pred             hhheeCCCcC
Confidence            8999998765


No 482
>PRK05231 homoserine kinase; Provisional
Probab=97.47  E-value=0.0025  Score=63.69  Aligned_cols=135  Identities=13%  Similarity=0.160  Sum_probs=75.7

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEEE------EEEeCCEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELYE------VMASKTKIY   86 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~------~~~~~~~~~   86 (472)
                      .+.|+.|....+|....  ++..+++|++. . ..    .+.+..|+.+++.|...+  +.+++.      +....+..+
T Consensus        27 ~~~l~~G~~n~~y~v~t--~~g~~vLK~~~-~-~~----~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~   98 (319)
T PRK05231         27 LKGIAEGIENSNFFLTT--TQGEYVLTLFE-R-LT----AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPA   98 (319)
T ss_pred             cchhccccccceEEEEe--CCCcEEEEEec-c-CC----hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEE
Confidence            35567777789998875  33478999875 1 11    234445666666653212  333332      123356789


Q ss_pred             EEEEecCCCcccc-----------h---hcc--CCC--------C--H-HH-HH-----------HHHHH-HHHHHHHHH
Q 012021           87 FVMEYVKGGELFG-----------K---VAK--GKL--------K--E-DA-AR-----------KYFQQ-LISAVDYCH  126 (472)
Q Consensus        87 lV~E~~~gg~L~~-----------~---i~~--~~l--------~--e-~~-~~-----------~i~~q-l~~aL~yLH  126 (472)
                      ++++|++|..+..           .   +..  ..+        .  . .. ..           ..+.+ +...++.+.
T Consensus        99 ~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  178 (319)
T PRK05231         99 AIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLA  178 (319)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhh
Confidence            9999999974421           0   000  001        0  0 00 00           11111 111122222


Q ss_pred             -------hCCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021          127 -------SRGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       127 -------~~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                             ..|++|+|+.|.|||++.+...-|+||+.+.
T Consensus       179 ~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        179 SAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence                   2389999999999999966556899999754


No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.32  E-value=0.003  Score=65.00  Aligned_cols=77  Identities=18%  Similarity=0.080  Sum_probs=54.2

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeeccccc-ch---hhHHHHHHHHHHHHhcC---CCCeeeEEEEEEeCCEEE
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL-KV---GMIDQIKREISVMRLVR---HPNVVELYEVMASKTKIY   86 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~---~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~   86 (472)
                      ..+.||.|....||+..+  .+..++||.-...... ..   -..++...|...|+.+.   ..++++++.++.  +..+
T Consensus        36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v  111 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL  111 (418)
T ss_pred             eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence            467889999999999887  3567999986532221 11   13456667788887764   247888888877  4467


Q ss_pred             EEEEecCC
Q 012021           87 FVMEYVKG   94 (472)
Q Consensus        87 lV~E~~~g   94 (472)
                      ++||++++
T Consensus       112 lvME~L~~  119 (418)
T PLN02756        112 IGMRYLEP  119 (418)
T ss_pred             EEEeecCC
Confidence            88999987


No 484
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.17  E-value=0.0035  Score=62.90  Aligned_cols=141  Identities=22%  Similarity=0.272  Sum_probs=98.9

Q ss_pred             EEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccc----------------------cchhhH-HHHHHHHHHHHhcCCC
Q 012021           14 LGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKV----------------------LKVGMI-DQIKREISVMRLVRHP   70 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~----------------------~~~~~~-~~~~~Ei~il~~l~hp   70 (472)
                      |-..|..|.-+.||.|.. .+|..+|||++..+-.                      ....++ -+...|+.-|++++..
T Consensus       148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            445678899999999985 6888899999743210                      011122 3456788889988765


Q ss_pred             CeeeEEEEEEeCCEEEEEEEecCC-CcccchhccCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEcCCCCE
Q 012021           71 NVVELYEVMASKTKIYFVMEYVKG-GELFGKVAKGKLKEDAARKYFQQLISAVDYCH-SRGVCHRDLKPENLLLDEHGNL  148 (472)
Q Consensus        71 nIv~l~~~~~~~~~~~lV~E~~~g-g~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH-~~giiHrDlKp~NILld~~g~v  148 (472)
                      .|.-.--+...  ...|||+|+.. |--.-.++.-.++...+..+-+|++.-+.-|- ..+++|.||.--|+|+- +|.+
T Consensus       227 GIP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-dG~l  303 (520)
T KOG2270|consen  227 GIPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-DGKL  303 (520)
T ss_pred             CCCCCCceeee--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-CCEE
Confidence            55432222221  24699999953 22233445557888899999999998888774 56999999999999984 5689


Q ss_pred             EEeeccchhh
Q 012021          149 KVSDFGLSAL  158 (472)
Q Consensus       149 kl~DFGla~~  158 (472)
                      .|+|-+-+.-
T Consensus       304 yiIDVSQSVE  313 (520)
T KOG2270|consen  304 YIIDVSQSVE  313 (520)
T ss_pred             EEEEcccccc
Confidence            9999986543


No 485
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=97.11  E-value=0.0061  Score=59.88  Aligned_cols=30  Identities=27%  Similarity=0.494  Sum_probs=25.0

Q ss_pred             CceecCCCCCcEEEcCCCC-EEEeeccchhh
Q 012021          129 GVCHRDLKPENLLLDEHGN-LKVSDFGLSAL  158 (472)
Q Consensus       129 giiHrDlKp~NILld~~g~-vkl~DFGla~~  158 (472)
                      .++|+|++|.|||++.+++ .-|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4899999999999997565 46999997653


No 486
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.09  E-value=0.0012  Score=68.69  Aligned_cols=163  Identities=23%  Similarity=0.258  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEEEeC-CEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 012021           55 DQIKREISVMRLVRHPNVVELYEVMASK-TKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSRGVCHR  133 (472)
Q Consensus        55 ~~~~~Ei~il~~l~hpnIv~l~~~~~~~-~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~giiHr  133 (472)
                      .++.-...+++.+.|+|...++++.... ....+|||++ +.+|.+.+..+.+-.....              .+|+.|-
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l~~~s~~--------------~~~~~~~   91 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNLKDESLL--------------AHGVLHL   91 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcccchhhhc--------------cccccee
Confidence            4456678899999999999999987554 3477899999 6688888776543222111              2222221


Q ss_pred             CCCCCcEEEcCCCCEEEeeccchhhhhcccCCCccccccCCCcccChhhhcccCCCCCcccchhhhHHHHHHhcCCCCCC
Q 012021          134 DLKPENLLLDEHGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILYVLLAGYLPFH  213 (472)
Q Consensus       134 DlKp~NILld~~g~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~~lltG~~Pf~  213 (472)
                           |+       ++++|    ....          .     |  |-      ..++++||||+|.++.++.-|...|.
T Consensus        92 -----~~-------~~~td----~~~t----------~-----~--~~------~~~pKsdVwsl~~i~~el~L~~~l~~  132 (725)
T KOG1093|consen   92 -----NI-------IYITD----HFLT----------K-----Y--PS------PIGPKSDVWSLGFIILELYLGISLEA  132 (725)
T ss_pred             -----hh-------hhccc----cccc----------c-----C--CC------CCCcchhhhhHHHHHHHHHHhhHHHH
Confidence                 22       22333    0000          0     0  00      11248999999999999999987776


Q ss_pred             CCcHHHHHHHHhccCCCC------------CCCCCHHHHHHHhcccCCCCCCcCChhhhhcCcccccCCC
Q 012021          214 DSNLMEMYRKIGKAEFKF------------PNWFAPEVRRLLSKILDPNPNTRISMTKIMENSWFRKGLV  271 (472)
Q Consensus       214 ~~~~~~~~~~i~~~~~~~------------~~~~s~~l~~li~~~L~~dP~~Rpt~~eil~h~~f~~~~~  271 (472)
                      .....+....+.+-....            -..++..+..+..+|+-..|..||...++++++-|.++..
T Consensus       133 ~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev~~  202 (725)
T KOG1093|consen  133 ELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEVYK  202 (725)
T ss_pred             HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHHHh
Confidence            554444333332211110            0113455678899999999999999999999999987654


No 487
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.06  E-value=0.0037  Score=63.25  Aligned_cols=77  Identities=16%  Similarity=0.100  Sum_probs=50.6

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeeccccc-c---hhhHHHHHHHHHHHHhcC--CC-CeeeEEEEEEeCCEEEEEE
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVL-K---VGMIDQIKREISVMRLVR--HP-NVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~---~~~~~~~~~Ei~il~~l~--hp-nIv~l~~~~~~~~~~~lV~   89 (472)
                      .+|.|....||++.+...++.|+||.-..--.. .   .-..++..-|...|+...  -| .++++|.+  +.....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            479999999999998544478999985422111 1   123456678888887764  34 45555544  445566999


Q ss_pred             EecCCC
Q 012021           90 EYVKGG   95 (472)
Q Consensus        90 E~~~gg   95 (472)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998653


No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.83  E-value=0.014  Score=57.93  Aligned_cols=29  Identities=38%  Similarity=0.746  Sum_probs=25.2

Q ss_pred             CCceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021          128 RGVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       128 ~giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47999999999999987 678999998543


No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.76  E-value=0.0057  Score=62.69  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             EeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccc---hhhHHHHHHHHHHHHhcC--CC-CeeeEEEEEEeCCEEEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLK---VGMIDQIKREISVMRLVR--HP-NVVELYEVMASKTKIYFV   88 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~---~~~~~~~~~Ei~il~~l~--hp-nIv~l~~~~~~~~~~~lV   88 (472)
                      .+.||.|.-.-||++.+...++.|+||.-..--...   .-..++..-|..+|+...  -| +++++|.+  +.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            678999999999999984346789999753221111   123577788999998774  35 45556654  44556788


Q ss_pred             EEecCCC
Q 012021           89 MEYVKGG   95 (472)
Q Consensus        89 ~E~~~gg   95 (472)
                      ||+++..
T Consensus       112 MEdL~~~  118 (409)
T PRK12396        112 MEDLSDH  118 (409)
T ss_pred             HHhCccc
Confidence            9988653


No 490
>PLN02236 choline kinase
Probab=96.73  E-value=0.014  Score=59.25  Aligned_cols=136  Identities=18%  Similarity=0.247  Sum_probs=81.1

Q ss_pred             EEeeEcccCCeEEEEEEEcC----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEEEE
Q 012021           14 LGRLLGQGTFAKVHYARNLK----TGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIYFV   88 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lV   88 (472)
                      -++.|-.|-...+|++....    .++.|++|+.....   ....++ .+|..+++.+..-++ .++++.+...    .|
T Consensus        40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~g----~v  111 (344)
T PLN02236         40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFDR-DDEIRTFECMSRHGQGPRLLGRFPNG----RV  111 (344)
T ss_pred             EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeech-HHHHHHHHHHHHcCCCCceEEEECCc----eE
Confidence            34455558888999986432    34789999875542   122233 679999988865444 3566665432    57


Q ss_pred             EEecCCCcccch-----------------hccCC-------CCHHHHHHHHHHHH-----------------HHHHHH--
Q 012021           89 MEYVKGGELFGK-----------------VAKGK-------LKEDAARKYFQQLI-----------------SAVDYC--  125 (472)
Q Consensus        89 ~E~~~gg~L~~~-----------------i~~~~-------l~e~~~~~i~~ql~-----------------~aL~yL--  125 (472)
                      .||++|.+|...                 ++...       .....+..++.++.                 ..+..|  
T Consensus       112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~  191 (344)
T PLN02236        112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK  191 (344)
T ss_pred             EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence            999987655311                 11101       11223333432221                 111111  


Q ss_pred             --H----hCCceecCCCCCcEEEcC-CCCEEEeeccchh
Q 012021          126 --H----SRGVCHRDLKPENLLLDE-HGNLKVSDFGLSA  157 (472)
Q Consensus       126 --H----~~giiHrDlKp~NILld~-~g~vkl~DFGla~  157 (472)
                        .    ...++|+|+++.|||+++ ++.+.++||..|.
T Consensus       192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence              1    226899999999999986 4689999998655


No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.38  E-value=0.034  Score=56.11  Aligned_cols=135  Identities=17%  Similarity=0.266  Sum_probs=78.1

Q ss_pred             EeeEcccCCeEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEEEEEE
Q 012021           15 GRLLGQGTFAKVHYARNLKT---GMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIYFVME   90 (472)
Q Consensus        15 ~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lV~E   90 (472)
                      ++.|..|=-..+|++.....   +..|.+|+......   ...+ -.+|..+++.+..-++ .++++++. .+   +|.+
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~Id-R~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~   90 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YVID-RERELQAIKYLSAAGFGAKLLGVFG-NG---MIQS   90 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---eEec-hHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eeeh
Confidence            34554477778998865432   34899998754321   1112 2578899988875555 45666653 22   5889


Q ss_pred             ecCCCcccc-----------------hhccCC------C-CHHHHHHHHHHHH----------------------HHHHH
Q 012021           91 YVKGGELFG-----------------KVAKGK------L-KEDAARKYFQQLI----------------------SAVDY  124 (472)
Q Consensus        91 ~~~gg~L~~-----------------~i~~~~------l-~e~~~~~i~~ql~----------------------~aL~y  124 (472)
                      |++|..|..                 .++...      . -...+..|+.++-                      .-+..
T Consensus        91 fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  170 (330)
T PLN02421         91 FINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVE  170 (330)
T ss_pred             hhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHH
Confidence            998765421                 011111      1 1223333332221                      11111


Q ss_pred             ----HHhC----CceecCCCCCcEEEcC-CCCEEEeeccchh
Q 012021          125 ----CHSR----GVCHRDLKPENLLLDE-HGNLKVSDFGLSA  157 (472)
Q Consensus       125 ----LH~~----giiHrDlKp~NILld~-~g~vkl~DFGla~  157 (472)
                          +...    -++|.|+.|.|||+++ ++.++++||..|.
T Consensus       171 l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        171 LKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             HHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence                1112    2799999999999975 5789999998765


No 492
>PF03881 Fructosamin_kin:  Fructosamine kinase;  InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.24  E-value=0.063  Score=53.04  Aligned_cols=75  Identities=12%  Similarity=0.144  Sum_probs=49.0

Q ss_pred             EEEeeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC---CCCeeeEEEEEEeCCEEEEEE
Q 012021           13 ELGRLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR---HPNVVELYEVMASKTKIYFVM   89 (472)
Q Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~lV~   89 (472)
                      +-.+.+|.|....+|...  .+++.+-||+-....      ...+..|..-|+.|.   --.+++++.+....+..||||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll   91 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESG------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL   91 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecChhh------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence            345778989999999877  588899999876222      245778888888884   445778999988877789999


Q ss_pred             EecCCC
Q 012021           90 EYVKGG   95 (472)
Q Consensus        90 E~~~gg   95 (472)
                      ||++.+
T Consensus        92 e~l~~~   97 (288)
T PF03881_consen   92 EFLEMG   97 (288)
T ss_dssp             E-----
T ss_pred             EeecCC
Confidence            999876


No 493
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.20  E-value=0.015  Score=54.47  Aligned_cols=29  Identities=38%  Similarity=0.840  Sum_probs=20.8

Q ss_pred             CceecCCCCCcEEE-cCCCCEEEeeccchh
Q 012021          129 GVCHRDLKPENLLL-DEHGNLKVSDFGLSA  157 (472)
Q Consensus       129 giiHrDlKp~NILl-d~~g~vkl~DFGla~  157 (472)
                      .++|.|+.|.|||+ +.++.++++||..|.
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            58999999999999 889999999998765


No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.07  E-value=0.024  Score=57.00  Aligned_cols=86  Identities=24%  Similarity=0.331  Sum_probs=61.4

Q ss_pred             CCCeeeEEEEE-EeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEcCCC
Q 012021           69 HPNVVELYEVM-ASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSR-GVCHRDLKPENLLLDEHG  146 (472)
Q Consensus        69 hpnIv~l~~~~-~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~-giiHrDlKp~NILld~~g  146 (472)
                      .++..+++-+- .+....|++|++- |++|... .  --..+++..++++.+..++-+..+ ..-|||+...||||+ +|
T Consensus       284 ~~~~e~~~vv~~de~~y~yl~~kdh-gt~is~i-k--~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G  358 (488)
T COG5072         284 SVFLETLKVVSLDETLYLYLHFKDH-GTPISII-K--ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG  358 (488)
T ss_pred             chhhhcceEEecCCceEEEEEEecC-Cceeeee-e--cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC
Confidence            44444444443 3344667788876 5555322 1  234567788889888888777755 688999999999999 99


Q ss_pred             CEEEeeccchhhh
Q 012021          147 NLKVSDFGLSALA  159 (472)
Q Consensus       147 ~vkl~DFGla~~~  159 (472)
                      ++.|+||-++++-
T Consensus       359 nvtLIDfklsRl~  371 (488)
T COG5072         359 NVTLIDFKLSRLS  371 (488)
T ss_pred             ceEEEEeeeeecc
Confidence            9999999999843


No 495
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.00  E-value=0.12  Score=51.61  Aligned_cols=29  Identities=21%  Similarity=0.242  Sum_probs=26.8

Q ss_pred             CceecCCCCCcEEEcCCCCEEEeeccchh
Q 012021          129 GVCHRDLKPENLLLDEHGNLKVSDFGLSA  157 (472)
Q Consensus       129 giiHrDlKp~NILld~~g~vkl~DFGla~  157 (472)
                      +++|+|+.++|+|++.++.+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            79999999999999999999999998655


No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.87  E-value=0.093  Score=52.83  Aligned_cols=133  Identities=20%  Similarity=0.291  Sum_probs=80.3

Q ss_pred             eEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC------eeeEEE----EEEeCCEEE
Q 012021           17 LLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN------VVELYE----VMASKTKIY   86 (472)
Q Consensus        17 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn------Iv~l~~----~~~~~~~~~   86 (472)
                      .|.+ .-..||+... .+|.. ++|+.... ..    ...+.-|+..|..|.-..      +..+-|    ......+.+
T Consensus        33 ~l~s-~eN~~f~~~~-~~g~~-iLki~~~~-~~----~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a  104 (331)
T COG2334          33 GLNS-EENSNFRVQT-EDGRY-ILKIYRPG-WT----RAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPA  104 (331)
T ss_pred             cccc-ccCceEEEEe-cCCCe-EEEEecCC-CC----HHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeE
Confidence            3444 4556888876 34444 99998776 22    256778888888774221      222222    222224888


Q ss_pred             EEEEecCCCcccc-h--------------h----------ccC---CCCHH----H---------HHHHHHHHHHHHHHH
Q 012021           87 FVMEYVKGGELFG-K--------------V----------AKG---KLKED----A---------ARKYFQQLISAVDYC  125 (472)
Q Consensus        87 lV~E~~~gg~L~~-~--------------i----------~~~---~l~e~----~---------~~~i~~ql~~aL~yL  125 (472)
                      -+.+|++|..+.. .              +          ..+   ...+.    .         -.....++...++.+
T Consensus       105 ~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~  184 (331)
T COG2334         105 ALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRL  184 (331)
T ss_pred             EEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHH
Confidence            9999999987762 1              0          000   01111    0         111233444555555


Q ss_pred             HhC--------C--ceecCCCCCcEEEcCCCC-EEEeeccchh
Q 012021          126 HSR--------G--VCHRDLKPENLLLDEHGN-LKVSDFGLSA  157 (472)
Q Consensus       126 H~~--------g--iiHrDlKp~NILld~~g~-vkl~DFGla~  157 (472)
                      .+.        +  +||+|+.|.||+++.+.. +.++|||-+.
T Consensus       185 ~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         185 LARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             HhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            543        4  999999999999999885 8999999654


No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.59  E-value=0.34  Score=48.74  Aligned_cols=71  Identities=15%  Similarity=0.071  Sum_probs=44.1

Q ss_pred             cCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcCCCC--eeeEE---E--EEEeCCEEEEEEEecC
Q 012021           21 GTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPN--VVELY---E--VMASKTKIYFVMEYVK   93 (472)
Q Consensus        21 G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~---~--~~~~~~~~~lV~E~~~   93 (472)
                      +.-..||.... .+|..+++|+......    ....+..|...+..|....  ++...   +  ....++..+.++++++
T Consensus        36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~----~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~  110 (325)
T PRK11768         36 SYENRVYQFGD-EDGRRVVAKFYRPERW----SDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG  110 (325)
T ss_pred             cccceEEEEec-CCCCEEEEEEcCcccC----CHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence            34456888864 4677899999864432    2356777888877664211  22211   1  2233567889999998


Q ss_pred             CCc
Q 012021           94 GGE   96 (472)
Q Consensus        94 gg~   96 (472)
                      |..
T Consensus       111 G~~  113 (325)
T PRK11768        111 GRA  113 (325)
T ss_pred             CCC
Confidence            864


No 498
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.44  E-value=0.058  Score=50.80  Aligned_cols=84  Identities=19%  Similarity=0.235  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEEEeCCEEEEEEEecCCCcccchhccCCCCHHHHHHHHHHHHHHHHHHHhC--Ccee
Q 012021           55 DQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFGKVAKGKLKEDAARKYFQQLISAVDYCHSR--GVCH  132 (472)
Q Consensus        55 ~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~i~~~~l~e~~~~~i~~ql~~aL~yLH~~--giiH  132 (472)
                      ..++.+.+++.++.  .|+++..-  +...+-++.|+|..-..           ... .++..=+.+|.-.|+.  +.+|
T Consensus       103 ~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i-----------~~~-N~i~agi~~L~~fH~~~~~~lH  166 (308)
T PF07387_consen  103 ALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI-----------NFS-NFITAGIKDLMDFHSENQHCLH  166 (308)
T ss_pred             hhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc-----------chh-HHHHHhHHHHHHhhccCCCeec
Confidence            44678888888763  56777632  44567789999844211           001 1111124567778843  7999


Q ss_pred             cCCCCCcEEEcCCCCEEEeecc
Q 012021          133 RDLKPENLLLDEHGNLKVSDFG  154 (472)
Q Consensus       133 rDlKp~NILld~~g~vkl~DFG  154 (472)
                      +|..|+||+-|..|.+||.|=+
T Consensus       167 GD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  167 GDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             CCCChhheeecCCCCEEecChh
Confidence            9999999999999999999976


No 499
>PTZ00384 choline kinase; Provisional
Probab=95.25  E-value=0.12  Score=53.21  Aligned_cols=76  Identities=14%  Similarity=0.204  Sum_probs=46.0

Q ss_pred             EEeeEcccCCeEEEEEEEcCC-CcE-----EEEEEeecccccchhhHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCEEE
Q 012021           14 LGRLLGQGTFAKVHYARNLKT-GMS-----VAIKIIDKEKVLKVGMIDQIKREISVMRLVRHPNV-VELYEVMASKTKIY   86 (472)
Q Consensus        14 i~~~LG~G~fg~Vy~a~~~~~-g~~-----vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~   86 (472)
                      .++.|..|--..+|++..... +..     |.+++.....    ...-.-.+|+.+++.+...++ .++++.+..    +
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~----~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g  125 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYN----SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----F  125 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCC----ceEeccHHHHHHHHHHHhCCCCCeEEEecCC----E
Confidence            345565588889999875332 122     4444421111    111122578999999976555 566666643    6


Q ss_pred             EEEEecCCCcc
Q 012021           87 FVMEYVKGGEL   97 (472)
Q Consensus        87 lV~E~~~gg~L   97 (472)
                      ++.||++|..|
T Consensus       126 ~l~efIeGr~l  136 (383)
T PTZ00384        126 TIQEWVEGNTM  136 (383)
T ss_pred             EEEEEeccccC
Confidence            99999999765


No 500
>PRK06148 hypothetical protein; Provisional
Probab=94.65  E-value=0.28  Score=56.99  Aligned_cols=135  Identities=14%  Similarity=0.230  Sum_probs=75.9

Q ss_pred             eeEcccCCeEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhcC-------CCCeeeE-----EEEEEe-C
Q 012021           16 RLLGQGTFAKVHYARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRLVR-------HPNVVEL-----YEVMAS-K   82 (472)
Q Consensus        16 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-------hpnIv~l-----~~~~~~-~   82 (472)
                      +.|+ |..-.+|+... .+|..+++|+.+....     ...+..|..+|..|.       -|.+++-     +..... +
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~-----~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~  103 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEP-----RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPD  103 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCccc-----hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCC
Confidence            5675 45677888864 5677899999876421     133444555665442       2333321     111211 2


Q ss_pred             C--EEEEEEEecCCCcccch-----------------h----cc-------CCCCH-----------------HHHHHHH
Q 012021           83 T--KIYFVMEYVKGGELFGK-----------------V----AK-------GKLKE-----------------DAARKYF  115 (472)
Q Consensus        83 ~--~~~lV~E~~~gg~L~~~-----------------i----~~-------~~l~e-----------------~~~~~i~  115 (472)
                      +  +.+.+++|++|..+.+.                 +    ..       ..+.+                 ...+.++
T Consensus       104 G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l  183 (1013)
T PRK06148        104 GEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALV  183 (1013)
T ss_pred             CceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHH
Confidence            2  56788999999766431                 0    00       00111                 1112223


Q ss_pred             HHHHHHHHH-----HH--hCCceecCCCCCcEEEcCCC--CEE-Eeeccchh
Q 012021          116 QQLISAVDY-----CH--SRGVCHRDLKPENLLLDEHG--NLK-VSDFGLSA  157 (472)
Q Consensus       116 ~ql~~aL~y-----LH--~~giiHrDlKp~NILld~~g--~vk-l~DFGla~  157 (472)
                      .+++....-     +.  .+++||.|+.+.|||++.++  .+. |+|||.+.
T Consensus       184 ~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        184 ERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            333333221     11  24799999999999999875  555 99999765


Done!