Citrus Sinensis ID: 012022

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470--
MVTTFLCLCFFLFTSTFALDMSIIDYNRMHGNGGGNMSESHMRMMYEHWLVKHGKNYNALGEQERRFEIFKDNLKFVNEHNAVARTYKVGLNKFADLTNDEFRNMYLGAKMERKKALRAGNGNAKSSDRYVYKHGDALPESVDWRAKGAVGPVKDQGQCGSCWAFSTVGAVEGINQIVTGDLISLSEQELVDCDKQYNQGCNGGLMDYAFKFIIKNGGIDTEEDYPYKATDGSCDPNRKNAHVVTIDGYEDVPQNDEKSLQKAVASQPVSVAIEAGGMAFQLYKSGVFTGICGTELDHGVIAVGYGTDGHLDYWIVRNSWGPDWGESGYIRMERNVNTKTGKCGIAIEPSYPIKKGQNPPNPGPSPPSPVNPPPSSPTVCDDYYTCPSGSTCCCMYEYGDFCFGWGCCPIESATCCEDHYSCCPHDFPICDLETGTCQMSANNPLAVKSLKQIPAISVRAHHILGNKGITSN
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEECccEEEcccccHHHHHHHHHcccEEEEEEccccccccccccEEcccccccccEEEEEEEEEccccEEEEEEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*VTTFLCLCFFLFTSTFALDMSIIDYNRMHGNGGGNMSESHMRMMYEHWLVKHGKNYNALGEQERRFEIFKDNLKFVNEHNAVARTYKVGLNKFADLTNDEFRNMYLGAK*******************YVYKHGDALPESVDWRAKGAVGPVKDQGQCGSCWAFSTVGAVEGINQIVTGDLISLSEQELVDCDKQYNQGCNGGLMDYAFKFIIKNGGIDTEEDYPYKATDGSCDPNRKNAHVVTIDGYEDVPQNDEKSLQKAVASQPVSVAIEAGGMAFQLYKSGVFTGICGTELDHGVIAVGYGTDGHLDYWIVRNSWGPDWGESGYIRMERNVNTKTGKCGIAIEPSYPI*************************VCDDYYTCPSGSTCCCMYEYGDFCFGWGCCPIESATCCEDHYSCCPHDFPICDLETGTCQMSANNPLAVKSLKQIPA*****************
xxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVTTFLCLCFFLFTSTFALDMSIIDYNRMHGNGGGNMSESHMRMMYEHWLVKHGKNYNALGEQERRFEIFKDNLKFVNEHNAVARTYKVGLNKFADLTNDEFRNMYLGAKMERKKALRAGNGNAKSSDRYVYKHGDALPESVDWRAKGAVGPVKDQGQCGSCWAFSTVGAVEGINQIVTGDLISLSEQELVDCDKQYNQGCNGGLMDYAFKFIIKNGGIDTEEDYPYKATDGSCDPNRKNAHVVTIDGYEDVPQNDEKSLQKAVASQPVSVAIEAGGMAFQLYKSGVFTGICGTELDHGVIAVGYGTDGHLDYWIVRNSWGPDWGESGYIRMERNVNTKTGKCGIAIEPSYPIKKGQNPPNPGPSPPSPVNPPPSSPTVCDDYYTCPSGSTCCCMYEYGDFCFGWGCCPIESATCCEDHYSCCPHDFPICDLETGTCQMSANNPLAVKSLKQIPAISVRAHHILGNKGITSN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cysteine proteinase RD21a probableP43297
Oryzain beta chain probableP25777

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.22.-Cysteine endopeptidases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FO5, chain A
Confidence level:very confident
Coverage over the Query: 137-356
View the alignment between query and template
View the model in PyMOL
Template: 1PCI, chain A
Confidence level:very confident
Coverage over the Query: 37-355
View the alignment between query and template
View the model in PyMOL
Template: 2JYE, chain A
Confidence level:very confident
Coverage over the Query: 376-453
View the alignment between query and template
View the model in PyMOL