BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012024
(472 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 218/505 (43%), Gaps = 79/505 (15%)
Query: 16 NGIQNRRNSFEDGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIR 74
+GI R + DG + C I PG+ F Y V D G+F+Y L ++AG +G +
Sbjct: 62 HGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLI 120
Query: 75 ILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKG--KKLPLPDGILINGRG--- 129
+ PF G+ +L+ DW+ + L + + P IL+NGRG
Sbjct: 121 VDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFD 179
Query: 130 -SGAA---------------------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLV 167
S AA F+V KTYR+RI++ +LNF I NH++ +V
Sbjct: 180 CSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239
Query: 168 EVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGIL 222
E +G + S +D++ G+SYSVL+T DQ P+ +Y++ V +R T LT L
Sbjct: 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYL 299
Query: 223 HYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIR 282
S S P S P P P +++++ +TA+ P P + + I
Sbjct: 300 PNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIF 348
Query: 283 LSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT 332
L ++ +NG ++AIN VS TP A + + F I PT
Sbjct: 349 LLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPT 408
Query: 333 ------GGGIYQDTAVMGADYRAFIEIVFQN----DEDIIQS--YHLNGYQFWVVGMDGG 380
G G+YQ ++++ QN E++ ++ +HL+G+ FWV+G G
Sbjct: 409 NEKTRIGNGVYQ------FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDG 462
Query: 381 QWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLR 440
++++ + NL++ R TV ++P W+AI DN G+W ++G
Sbjct: 463 KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF- 521
Query: 441 VYTASTSLRDEYPIPKNARLCGKAA 465
+ + IP A CG A
Sbjct: 522 ----AEGVEKVGRIPTKALACGGTA 542
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 191/482 (39%), Gaps = 75/482 (15%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI G +F Y V DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P+ P D + TV+ + DWY HT R G + PL D
Sbjct: 115 QYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWY---HTAARL----GPRFPLGAD 167
Query: 122 GILINGRGSGAA--------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING G A+ NV+ GK YR R+ ++ + F I H + ++EV+G +
Sbjct: 168 ATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGIN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLT---TTGILHYSNSAGP 230
+ S+ + Q YS ++ A+Q +Y+I + F + + IL Y + P
Sbjct: 228 SQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQGA--P 285
Query: 231 VSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQV 290
V+ P T I I +NL P P GS G ++ K + L A
Sbjct: 286 VAEPTTTQTTSVIPL-------IETNLHPLARMPVP-GSPTPGGVD--KALNL---AFNF 332
Query: 291 NGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADY--- 347
NG + IN+ SF P P+ L +G QD G+ Y
Sbjct: 333 NGTNFF-INNASFTPPTVPVLLQIL----------------SGAQTAQDLLPAGSVYPLP 375
Query: 348 -RAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV 403
+ IEI +HL+G+ F VV SA YN D + R V
Sbjct: 376 AHSTIEITLPATALAPGAPHPFHLHGHAFAVV-------RSAGSTTYNYNDPIFRDVVST 428
Query: 404 -YPKSWSAIYIAL--DNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-AR 459
P + + I DN G W L +L F + ++ P+PK +
Sbjct: 429 GTPAAGDNVTIRFQTDNPGPWFLHCH--IDFHLEAGFAIVFAEDVADVKAANPVPKAWSD 486
Query: 460 LC 461
LC
Sbjct: 487 LC 488
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 188/480 (39%), Gaps = 73/480 (15%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++++ + +G + ++ DG + CPI G +F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKTSSIHWHGFFQQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D D TV+ + DWY + A L G + P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASLYDIDNDDTVITLADWYH-----VAAKL--GPRFPFGSD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING G A V QGK YR R+ ++ + F I NH M ++E + +
Sbjct: 168 STLINGLGRTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSIN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLT---TTGILHYSNSAGP 230
T S+ + Q YS ++ A QP +Y+I + F +T + IL Y +
Sbjct: 228 TQPLEVDSIQIFAAQRYSFVLDASQPVDNYWIRANPAFGNTGFAGGINSAILRYDGAPEI 287
Query: 231 VSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQV 290
+ PT ++ +L P P P GS G ++ + +
Sbjct: 288 EPTSVQTTPTKPLN---------EVDLHPLSPMPVP-GSPEPGGVDKPLNLVFN-----F 332
Query: 291 NGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADY--- 347
NG + IN +F+P P+ L +G QD G+ +
Sbjct: 333 NGTNFF-INDHTFVPPSVPVLLQIL----------------SGAQAAQDLVPEGSVFVLP 375
Query: 348 -RAFIEIVF---QNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV 403
+ IEI F N +HL+G+ F VV SA + YN + + R V
Sbjct: 376 SNSSIEISFPATANAPGFPHPFHLHGHAFAVV-------RSAGSSVYNYDNPIFRDVVST 428
Query: 404 -YPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-ARLC 461
P I +N G W L +L F + + + + P+P+ + LC
Sbjct: 429 GQPGDNVTIRFETNNPGPWFLHCH--IDFHLDAGFAVVMAEDTPDTKAANPVPQAWSDLC 486
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 168/450 (37%), Gaps = 83/450 (18%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI G F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQ 115
Query: 65 KAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGI 123
G G I + D D TV+ + DWY L A + G +P D
Sbjct: 116 YCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH-----LAAKV--GAPVPTADAT 168
Query: 124 LINGRGSGAA--------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 175
LING G AA V +GK YR R+ ++ + F I H + ++E + +
Sbjct: 169 LINGLGRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLK 228
Query: 176 QTTYSSLDVHVGQSYSVLVTADQPARDYYI-VVSSRFTSTVL--TTTGILHYSNSAGPVS 232
T SL + Q YS ++ ADQ +Y+I + + T T + IL Y +A
Sbjct: 229 PHTVDSLQIFAAQRYSFVLNADQDVDNYWIRALPNSGTQNFAGGTNSAILRYDGAA---- 284
Query: 233 GPIPGGPTVQIDWSLNQ-ARSIRSNL--TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQ 289
P PT S N S + L TA+ P P G + L+ + G
Sbjct: 285 ---PVEPTTSQTPSTNPLVESALTTLKGTAAPGSPTPGG----------VDLALNMAFGF 331
Query: 290 VNGKQRYAINSVSFIPADTPLKL---------ADYFKIGGVFRIGSISDNPTGGGIYQDT 340
G + IN SF P P+ L AD G V+ + + +D
Sbjct: 332 AGGN--FTINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANAD----------- 378
Query: 341 AVMGADYRAFIEIVFQNDED---IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA 397
IEI +HL+G+ F VV SA + YN + V
Sbjct: 379 ----------IEISLPATAAAPGFPHPFHLHGHVFAVV-------RSAGSSTYNYANPVY 421
Query: 398 RVTVQV-YPKSWSAIYIALDNVGMWNLRSE 426
R V P I DN G W L
Sbjct: 422 RDVVSTGAPGDNVTIRFRTDNPGPWFLHCH 451
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 168/450 (37%), Gaps = 83/450 (18%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI G F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQ 115
Query: 65 KAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGI 123
G G I + D D TV+ + DWY L A + G +P D
Sbjct: 116 YCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH-----LAAKV--GAPVPTADAT 168
Query: 124 LINGRGSGAA--------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 175
LING G AA V +GK YR R+ ++ + F I H + ++E + +
Sbjct: 169 LINGLGRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLK 228
Query: 176 QTTYSSLDVHVGQSYSVLVTADQPARDYYI-VVSSRFTSTVL--TTTGILHYSNSAGPVS 232
T SL + Q YS ++ ADQ +Y+I + + T T + IL Y +A
Sbjct: 229 PHTVDSLQIFAAQRYSFVLNADQDVDNYWIRALPNSGTQNFAGGTNSAILRYDGAA---- 284
Query: 233 GPIPGGPTVQIDWSLNQ-ARSIRSNL--TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQ 289
P PT S N S + L TA+ P P G + L+ + G
Sbjct: 285 ---PVEPTTSQTPSTNPLVESALTTLKGTAAPGSPTPGG----------VDLALNMAFGF 331
Query: 290 VNGKQRYAINSVSFIPADTPLKL---------ADYFKIGGVFRIGSISDNPTGGGIYQDT 340
G + IN SF P P+ L AD G V+ + + +D
Sbjct: 332 AGGN--FTINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANAD----------- 378
Query: 341 AVMGADYRAFIEIVFQNDED---IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA 397
IEI +HL+G+ F VV SA + YN + V
Sbjct: 379 ----------IEISLPATAAAPGFPHPFHLHGHVFAVV-------RSAGSSTYNYANPVY 421
Query: 398 RVTVQV-YPKSWSAIYIALDNVGMWNLRSE 426
R V P I DN G W L
Sbjct: 422 RDVVSTGAPGDNVTIRFRTDNPGPWFLHCH 451
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 193/488 (39%), Gaps = 87/488 (17%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI PG +F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D D TV+ + DWY HT + G + P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING+G + V +GK YR R+ ++ + F I H + ++EV+ +
Sbjct: 168 ATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVL---TTTGILHYSNSAGP 230
+ S+ + Q YS ++ A+Q +Y+I + F + + IL Y
Sbjct: 228 SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYD----- 282
Query: 231 VSGPIPGGPTVQIDWSLNQARSIRS------NLTASGPRPNPQGSYHYGLINTTKTIRLS 284
G P V+ + NQ S++ + S P P GS G ++ K I +
Sbjct: 283 ------GAPAVEP--TTNQTTSVKPLNEVDLHPLVSTPVP---GSPSSGGVD--KAINM- 328
Query: 285 SSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMG 344
A NG + IN SF+P P+ L +G QD G
Sbjct: 329 --AFNFNGSNFF-INGASFVPPTVPVLLQIL----------------SGAQTAQDLLPSG 369
Query: 345 ADY----RAFIEIVF---QNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA 397
+ Y A IEI F +HL+G+ F VV SA YN + +
Sbjct: 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVV-------RSAGSTVYNYDNPIF 422
Query: 398 RVTVQV-YPKSWSAIYIALD--NVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPI 454
R V P + + I D N G W L +L F + + + ++ P+
Sbjct: 423 RDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCH--IDFHLEGGFAVVMAEDTPDVKAVNPV 480
Query: 455 PKN-ARLC 461
P+ + LC
Sbjct: 481 PQAWSDLC 488
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 190/486 (39%), Gaps = 83/486 (17%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI PG +F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D D TV+ + DWY HT + G + P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING+G + V +GK YR R+ ++ + F I H + ++EV+ +
Sbjct: 168 ATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVL---TTTGILHYSNSAGP 230
+ S+ + Q YS ++ A+Q +Y+I + F + + IL Y
Sbjct: 228 SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYD----- 282
Query: 231 VSGPIPGGPTVQIDWSLNQARSIRS----NLTASGPRPNPQGSYHYGLINTTKTIRLSSS 286
G P V+ + NQ S++ +L P P G+ K I +
Sbjct: 283 ------GAPAVEP--TTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGV---DKAINM--- 328
Query: 287 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346
A NG + IN SF+P P+ L +G QD G+
Sbjct: 329 AFNFNGSNFF-INGASFVPPTVPVLLQIL----------------SGAQTAQDLLPSGSV 371
Query: 347 Y----RAFIEIVF---QNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARV 399
Y A IEI F +HL+G+ F VV SA YN + + R
Sbjct: 372 YVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVV-------RSAGSTVYNYDNPIFRD 424
Query: 400 TVQV-YPKSWSAIYIALD--NVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPK 456
V P + + I D N G W L +L F + + + ++ P+P+
Sbjct: 425 VVSTGTPAAGDNVTIRFDTNNPGPWFLHCH--IDFHLEGGFAVVMAEDTPDVKAVNPVPQ 482
Query: 457 N-ARLC 461
+ LC
Sbjct: 483 AWSDLC 488
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T +R + +G+ R ++ DG G CPI PG F Y G+F+Y
Sbjct: 56 TMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQ 115
Query: 65 KAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGI 123
G G + I D + T++ + DWY ++ PD
Sbjct: 116 YCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDAT 168
Query: 124 LINGRG---SGAA-----FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 175
LING+G G A NVEQGK YR+R+ ++ + F I H++ ++EV+G T
Sbjct: 169 LINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTE 228
Query: 176 QTTYSSLDVHVGQSYSVLVTADQPARDYYI 205
T L + GQ YS ++ A+QP +Y+I
Sbjct: 229 PHTVDRLQIFTGQRYSFVLDANQPVDNYWI 258
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T +R + +G+ R ++ DG G CPI PG F Y G+F+Y
Sbjct: 56 TMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQ 115
Query: 65 KAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGI 123
G G + I D + T++ + DWY ++ PD
Sbjct: 116 YCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDAT 168
Query: 124 LINGRG---SGAA-----FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 175
LING+G G A NVEQGK YR+R+ ++ + F I H++ ++EV+G T
Sbjct: 169 LINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTE 228
Query: 176 QTTYSSLDVHVGQSYSVLVTADQPARDYYI 205
T L + GQ YS ++ A+QP +Y+I
Sbjct: 229 PHTVDRLQIFTGQRYSFVLDANQPVDNYWI 258
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 173/448 (38%), Gaps = 71/448 (15%)
Query: 5 ATSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAF 63
AT +++ + +G+ ++ DG + CPI G +F Y V DQ G+F+Y L+
Sbjct: 55 ATMLKTTTIHWHGLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLS- 113
Query: 64 HKAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-P 120
+ G G ++ P P D D TV+ + DWY HT + G P
Sbjct: 114 TQYCDGLRGPLVVYDPSDPYASMYDVDDDTTVITLSDWY---HTAAKL----GPAFPPNA 166
Query: 121 DGILINGRGSGAAFN--------VEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGT 172
D +LING G A N VEQ K YR R+ ++ + F I H M ++EV+G
Sbjct: 167 DSVLINGLGRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGV 226
Query: 173 HTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTG----ILHYSNSA 228
+ S+ + Q YS ++ A Q +Y+I T T+ TT G IL YS +
Sbjct: 227 NHEPLEVDSIQIFASQRYSFVLNATQSVDNYWIRAIPN-TGTIDTTGGLNSAILRYSGAD 285
Query: 229 GPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAG 288
+ P T I + S P G G ++ + S
Sbjct: 286 --IVDPTANATTSVIPLVETDLVPLDS--------PAAPGDPVVGGVDLAMNLDFS---- 331
Query: 289 QVNGKQRYAINSVSFIPADTPLKL---------ADYFKIGGVFRIGSISDNPTGGGIYQD 339
NG + IN+ + IP P+ L +D G V+ ++ N T +
Sbjct: 332 -FNGTNFF-INNETLIPPTVPVLLQILSGAQSASDLLPTGSVY---TLPLNSTIELSFPI 386
Query: 340 TAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARV 399
T V G N +HL+G+ F VV SA + YN + V R
Sbjct: 387 TTVNGV----------TNAPGAPHPFHLHGHAFSVV-------RSAGSSDYNYVNPVRRD 429
Query: 400 TVQV-YPKSWSAIYIALDNVGMWNLRSE 426
TV P I DN G W L
Sbjct: 430 TVSTGNPGDNVTIRFTTDNAGPWFLHCH 457
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 171/444 (38%), Gaps = 71/444 (15%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G ++ DG + CPI G F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQ 115
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDG 122
G G I ++ P+ P D D TV+ + DWY L A + G +P D
Sbjct: 116 YCDGLRGPI-VVYDPQDPHKSLYDVDDDSTVITLADWYH-----LAAKV--GSPVPTADA 167
Query: 123 ILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT 174
LING G A V +GK YR R+ ++ + F I H + ++E + +
Sbjct: 168 TLINGLGRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNL 227
Query: 175 LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVV-----SSRFTSTVLTTTGILHYSNSAG 229
T S+ + Q YS ++ ADQ +Y+I + F V + IL Y +A
Sbjct: 228 KPQTVDSIQIFAAQRYSFVLNADQDVGNYWIRALPNSGTRNFDGGV--NSAILRYDGAA- 284
Query: 230 PVSGPIPGGPTVQIDWSLNQ-ARSIRSNL--TASGPRPNPQGSYHYGLINTTKTIRLSSS 286
P PT S N S + L TA+ P P G + L+ +
Sbjct: 285 ------PVEPTTSQTPSTNPLVESALTTLEGTAAPGSPAPGG----------VDLALNMA 328
Query: 287 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346
G GK + IN SF P P+ L + G S D G +Y A
Sbjct: 329 FGFAGGK--FTINGASFTPPTVPVLLQ---ILSGA---QSAQDLLPSGSVYSLPA----- 375
Query: 347 YRAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV 403
A IEI +HL+G+ F VV SA + YN + V R V
Sbjct: 376 -NADIEISLPATAAAPGFPHPFHLHGHTFAVV-------RSAGSSTYNYENPVYRDVVST 427
Query: 404 -YPKSWSAIYIALDNVGMWNLRSE 426
P I DN G W L
Sbjct: 428 GSPGDNVTIRFRTDNPGPWFLHCH 451
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 181/450 (40%), Gaps = 81/450 (18%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T +++ + +G + ++ DG + CPI G +F Y QV Q G+F+Y L+
Sbjct: 56 TMLKTTSIHWHGFFQKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D + TV+ + DWY + A L G + P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHANLYDVDDESTVITLADWYH-----VAAKL--GPRFPKGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING G A +V +GK YR R+ ++ + F I +H++ ++E +G
Sbjct: 168 STLINGLGRSTSTPTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVS 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVL---TTTGILHYSNSAGP 230
T T S+ + Q YS ++ A+Q +Y+I + F +T + IL Y + A P
Sbjct: 228 TQPVTVDSIQIFAAQRYSFVLNANQDVDNYWIRANPNFGTTGFADGVNSAILRY-DDADP 286
Query: 231 VSGPIPG--GPTVQIDWSLNQARS--IRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSS 286
V P+ G T+ ++ L+ S + N T G N ++++ N
Sbjct: 287 VE-PVTNQTGTTLLLETDLHPLTSMPVPGNPTQGGADLNLNMAFNFDGTN---------- 335
Query: 287 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346
+ IN SF P P+ L +I S G QD G+
Sbjct: 336 ---------FFINGESFTPPTVPVLL----------QIIS------GANTAQDLLPSGSV 370
Query: 347 Y----RAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARV 399
Y + IEI F +HL+G+ F VV SA YN D V R
Sbjct: 371 YSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVV-------RSAGSTSYNYDDPVWRD 423
Query: 400 TVQV-YPKSWSAIYIAL--DNVGMWNLRSE 426
V P++ + I DN G W L
Sbjct: 424 VVSTGTPQAGDNVTIRFQTDNPGPWFLHCH 453
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 179/446 (40%), Gaps = 72/446 (16%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T +++ + +G + ++ DG + CPI PG +F Y QV +Q G+F+Y L+
Sbjct: 56 TMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D D TV+ + DWY HT + G + P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPAGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING+G + V +GK R R+ ++ + F I H + ++EV+ ++
Sbjct: 168 ATLINGKGRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLT---TTGILHYSNSAGP 230
+ + S+ + Q YS ++ A+Q +Y+I + F + + IL Y
Sbjct: 228 SQPLSVDSIQIFAAQRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYD----- 282
Query: 231 VSGPIPGGPTVQIDWSLNQARSIRS----NLTASGPRPNPQGSYHYGLINTTKTIRLSSS 286
G P V+ + NQ S++ NL P P GS G ++ K I +
Sbjct: 283 ------GAPAVEP--TTNQTTSVKPLNEVNLHPLVSTPVP-GSPSSGGVD--KAINM--- 328
Query: 287 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346
A NG + IN SF+P P+ L +S T + +V
Sbjct: 329 AFNFNGSNFF-INGASFVPPSVPVLLQ------------ILSGAQTAQDLLPSGSVXVLP 375
Query: 347 YRAFIEIVF---QNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV 403
A IEI F +HL+G+ F VV SA YN + + R V
Sbjct: 376 SNASIEISFPATAAAPGAPHPFHLHGHTFAVV-------RSAGSTVYNYSNPIFRDVVST 428
Query: 404 -YPKSWSAIYIAL--DNVGMWNLRSE 426
P + + I +N G W L
Sbjct: 429 GTPAAGDNVTIRFLTNNPGPWFLHCH 454
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G + ++ DG + CPI G +F Y QV DQ G+F+Y L+
Sbjct: 56 TMLKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIPVP-FPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P D D TV+ + DWY + A L G PL D
Sbjct: 115 QYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYH-----VAAKL--GPAFPLGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING+G + +V GK YR R+ ++ + F I H M ++E + +
Sbjct: 168 ATLINGKGRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSIN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLT---TTGILHYSNSAG 229
T S+ + Q YS ++ A+Q +Y+I + F + T + IL Y +A
Sbjct: 228 TAPLVVDSIQIFAAQRYSFVLEANQAVDNYWIRANPNFGNVGFTGGINSAILRYDGAAA 286
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 164/410 (40%), Gaps = 58/410 (14%)
Query: 34 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIP-VPFPDPAGDY 92
CPI P ++F Y V Q G+++Y L+ + G G ++ P P + D
Sbjct: 106 CPIIPNESFVYDFVVPGQAGTYWYHSHLS-TQYCDGLRGAFVVYDPNDPHLSLYDVDDAS 164
Query: 93 TVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAA---------FNVEQGKTY 142
TV+ I DWY S T L + +K P D LING G +A +V+ GK Y
Sbjct: 165 TVITIADWYHSLSTVLFPNPNKAPPAP--DTTLINGLGRNSANPSAGQLAVVSVQSGKRY 222
Query: 143 RLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARD 202
R RI + + F I H+M ++EV+G T SL + GQ YSV+V A+Q +
Sbjct: 223 RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGN 282
Query: 203 YYIVVSSR-----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNL 257
Y+I + FT + + I Y +A V+ P + +LN+A I
Sbjct: 283 YWIRANPSNGRNGFTGGI--NSAIFRYQGAA--VAEPT---TSQNSGTALNEANLIPLIN 335
Query: 258 TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFK 317
+ P P G+ I L+ G+ + IN FIP P+ L
Sbjct: 336 PGAPGNPVPGGA----------DINLNLRIGRNATTADFTINGAPFIPPTVPVLL----- 380
Query: 318 IGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGM 377
+I S NP + AV+ IEI + +HL+G+ F VV
Sbjct: 381 -----QILSGVTNPN--DLLPGGAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVRT 431
Query: 378 DGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIY-IALDNVGMWNLRSE 426
G + YN + V R V + + + DN G W L
Sbjct: 432 PG-------SSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCH 474
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 40/411 (9%)
Query: 27 DGV-YGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF 85
DGV + T CPI PG Y V +G+++Y S + G G+ I+ P +
Sbjct: 73 DGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYH-SHTDGQYEDGMKGLFIIKDDSFPYDY 131
Query: 86 PDPAGDYTVLIGDWYKSNHTDLRAHL----DKGKKLPLPDGILINGRGSGAAFNVEQGKT 141
+ + ++ + +WY TDL + P+P +++N + V+ T
Sbjct: 132 DE---ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNT-MNLTWEVQPDTT 187
Query: 142 YRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLV-TADQPA 200
Y LRI NVG S F I++H+M +VE++G T + L + V Q Y+VLV T +
Sbjct: 188 YLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTD 247
Query: 201 RDYYIVVSSRFTSTVLTTT-GILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTA 259
+++ I+ +F T+L L + ++ V PT N SI + L
Sbjct: 248 KNFAIM--QKFDDTMLDVIPSDLQLNATSYMVYNKTAALPT------QNYVDSIDNFLDD 299
Query: 260 SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIG 319
+P + + YG + T+ + + NG N++++ P +
Sbjct: 300 FYLQPYEKEAI-YGEPDHVITVDVVMDNLK-NGVNYAFFNNITYTAPKVPTLMT------ 351
Query: 320 GVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDG 379
V G ++N G T ++ D +EIV N + +HL+G+ F + D
Sbjct: 352 -VLSSGDQANNSEIYGSNTHTFILEKD--EIVEIVLNNQDTGTHPFHLHGHAFQTIQRDR 408
Query: 380 GQWTSASRNQYNL---------RDAVARVTVQVYPKSWSAIYIALDNVGMW 421
+ ++ + R T+ V P+S I DN G+W
Sbjct: 409 TYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVW 459
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 173/446 (38%), Gaps = 72/446 (16%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T +++ + +G + ++ DG + CPI PG +F Y QV +Q G+F+Y L+
Sbjct: 56 TMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLS-T 114
Query: 65 KAAGGFGGIRILSRPRIPVP--FPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPL-PD 121
+ G G ++ P P + D T+ + DWY HT + G P D
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTTITLADWY---HTAAKL----GPAFPNGAD 167
Query: 122 GILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 173
LING+G + +V +GK R R+ ++ + F I H ++E + +
Sbjct: 168 STLINGKGRAPSDSSAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVN 227
Query: 174 TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLT---TTGILHYSNSAGP 230
+ S+ + Q YS + A+Q +Y+I + F + + IL Y
Sbjct: 228 SQPLNTDSIQIFAAQRYSFTLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYD----- 282
Query: 231 VSGPIPGGPTVQIDWSLNQARSIR----SNLTASGPRPNPQGSYHYGLINTTKTIRLSSS 286
G P V+ + NQ+ S + +NL P P GS G ++ K I +
Sbjct: 283 ------GAPAVEP--TTNQSTSTQPLNETNLHPLVSTPVP-GSPAAGGVD--KAINM--- 328
Query: 287 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346
A NG + IN SF P P+ L +S T + +V
Sbjct: 329 AFNFNGSNFF-INGASFTPPSVPVLLQ------------ILSGAQTAQDLLPSGSVXTLP 375
Query: 347 YRAFIEIVF---QNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV 403
A IEI F +HL+G+ F VV SA YN + + R V
Sbjct: 376 SNASIEISFPATAAAPGAPHPFHLHGHVFAVV-------RSAGSTVYNYSNPIFRDVVST 428
Query: 404 -YPKSWSAIYIAL--DNVGMWNLRSE 426
P + + I +N G W L
Sbjct: 429 GTPAAGDNVTIRFLTNNPGPWFLHCH 454
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 179/462 (38%), Gaps = 66/462 (14%)
Query: 21 RRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 79
+ ++ DG + T CPI G +F+Y V G+++Y L + G G ++ P
Sbjct: 72 KGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTT-QYCDGLRGPFVVYDP 130
Query: 80 RIP-VPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSG------ 131
P D D T++ + DWY L + G + D LI+G G
Sbjct: 131 NDPDANLYDVDDDTTIITLADWYHV----LAKEMGAGGAI-TADSTLIDGLGRTHVNVAA 185
Query: 132 ---AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQ 188
+ VE GK YR+R+ ++ + +F I H M ++E +G + + T + + Q
Sbjct: 186 VPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245
Query: 189 SYSVLVTADQPARDYYIVVSSR-----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQI 243
YS ++ A+QP +Y+I + F + + IL Y + + P+ TV
Sbjct: 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGI--NSAILRYDGAT--TADPVTVASTVHT 301
Query: 244 DWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSF 303
+ + L+ +G NP H G + + L + G + IN VSF
Sbjct: 302 KCLI---ETDLHPLSRNGVPGNP----HQGGADCNLNLSLGFACG------NFVINGVSF 348
Query: 304 IPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVF-QNDEDII 362
P P+ L +I S ++ T + +V+ + IEI
Sbjct: 349 TPPTVPVLL----------QICSGAN--TAADLLPSGSVISLPSNSTIEIALPAGAAGGP 396
Query: 363 QSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSA-IYIALDNVGMW 421
+HL+G+ F V SAS + N D + R V + + I DN G W
Sbjct: 397 HPFHLHGHDFAVS-------ESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPW 449
Query: 422 NLRSE-SWARQYLGQQFYLRVYTASTSLRDEYPIPKN-ARLC 461
L W +L F + + P+P+ + LC
Sbjct: 450 FLHCHIDW---HLDAGFAIVFAEDIPNTASANPVPEAWSNLC 488
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 2 SLTATSIRSAFANG-----NGIQNRRNSFEDGVYGTT-CPIPP-GKNFTYILQVKDQIGS 54
++ T I + NG +GI + + DG G T CPIPP G TY + + Q G+
Sbjct: 76 TVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGT 134
Query: 55 FYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDK 113
+Y + G G I+I +P D V I D+Y DL H +
Sbjct: 135 SWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----DLGVFPITDYYYRAADDL-VHFTQ 188
Query: 114 GKKLPLPDGILING--------RGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK 165
P D +LING G A + GK +RLRI N +N + NH M
Sbjct: 189 NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT 248
Query: 166 LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVS 208
++ + T SL + VGQ Y V++ A + +Y+ V+
Sbjct: 249 VIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 2 SLTATSIRSAFANG-----NGIQNRRNSFEDGVYGTT-CPIPP-GKNFTYILQVKDQIGS 54
++ T I + NG +GI + + DG G T CPIPP G TY + + Q G+
Sbjct: 76 TVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGT 134
Query: 55 FYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDK 113
+Y + G G I+I +P D V I D+Y DL H +
Sbjct: 135 SWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----DLGVFPITDYYYRAADDL-VHFTQ 188
Query: 114 GKKLPLPDGILING--------RGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK 165
P D +LING G A + GK +RLRI N +N + NH M
Sbjct: 189 NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT 248
Query: 166 LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVS 208
++ + T SL + VGQ Y V++ A + +Y+ V+
Sbjct: 249 VIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 30/236 (12%)
Query: 27 DGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF 85
DGV G T CPI PG TY QV Q G+ +Y + G FG + I++ P +
Sbjct: 137 DGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL-IINGPAT-ADY 193
Query: 86 PDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGR--------------GSG 131
+ G + + DW + ++ G P + L+NG G G
Sbjct: 194 DEDVG--VIFLQDWAHESVFEIWDTARLGAP-PALENTLMNGTNTFDCSASTDPNCVGGG 250
Query: 132 AAFNVE--QGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQS 189
F + +G YRLR+ NVG+ + F I NH + ++ + + T +L + +GQ
Sbjct: 251 KKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQR 310
Query: 190 YSVLVTADQPARDYYIV----VSSRFTSTVLTTTGILHYSNS--AGPVS-GPIPGG 238
Y V+V A+ A +Y+I + + TGIL Y +S A P S G P G
Sbjct: 311 YDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRG 366
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 361 IIQSYHLNGYQFWVVGMDGGQWTS-ASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVG 419
I HL+G+ F++V + + S S ++NL + R + + AI LDN G
Sbjct: 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPG 520
Query: 420 MWNLR-------SESWARQYLGQQFYLRVYTASTSLRDEYPIPKNA 458
W L SE A Q++ Q + V T++ ++ NA
Sbjct: 521 SWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANWNA 566
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 30/236 (12%)
Query: 27 DGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF 85
DGV G T CPI PG TY QV Q G+ +Y + G FG + I++ P +
Sbjct: 137 DGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL-IINGPAT-ADY 193
Query: 86 PDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGR--------------GSG 131
+ G + + DW + ++ G P + L+NG G G
Sbjct: 194 DEDVG--VIFLQDWAHESVFEIWDTARLGAP-PALENTLMNGTNTFDCSASTDPNCVGGG 250
Query: 132 AAFNVE--QGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQS 189
F + +G YRLR+ NVG+ + F I NH + ++ + + T +L + +GQ
Sbjct: 251 KKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQR 310
Query: 190 YSVLVTADQPARDYYIV----VSSRFTSTVLTTTGILHYSNS--AGPVS-GPIPGG 238
Y V+V A+ A +Y+I + + TGIL Y +S A P S G P G
Sbjct: 311 YDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRG 366
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 361 IIQSYHLNGYQFWVVGMDGGQWTS-ASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVG 419
I HL+G+ F++V + + S S ++NL + R + + AI LDN G
Sbjct: 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPG 520
Query: 420 MWNLR-------SESWARQYLGQQFYLRVYTASTSLRDEYPIPKNA 458
W L SE A Q++ Q + V T++ ++ NA
Sbjct: 521 SWLLHCHIAWHASEGMAMQFVESQSSIAVKMTDTAIFEDTCANWNA 566
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 2 SLTATSIRSAFANG-----NGIQNRRNSFEDGVYGTT-CPIPP-GKNFTYILQVKDQIGS 54
++ T I + NG +GI + + DG G T CPIPP G TY + + Q G+
Sbjct: 76 TVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGT 134
Query: 55 FYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVL-IGDWYKSNHTDLRAHLDK 113
+Y + G G I+I +P D V I D+Y DL H +
Sbjct: 135 SWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----DLGVFPITDYYYRAADDL-VHFTQ 188
Query: 114 GKKLPLPDGILING--------RGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK 165
P D +LING G A + GK +RLRI N +N + NH M
Sbjct: 189 NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT 248
Query: 166 LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVS 208
++ + T SL + VGQ Y V++ A + +Y+ V+
Sbjct: 249 VIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 2 SLTATSIRSAFANG-----NGIQNRRNSFEDGVYGTT-CPIPP-GKNFTYILQVKDQIGS 54
++ T I + NG +G++ N F DG G T CPIPP G TY + Q G+
Sbjct: 117 NIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRAT-QYGT 175
Query: 55 FYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTV--LIGDWYKSNHTDLRAHLD 112
+Y + G G I+I +P D V L+ +Y+S D H
Sbjct: 176 SWYHSHFSAQYGNGVVGTIQIDGPASLPYDI-----DLGVFPLMDYYYRS--ADELVHFT 228
Query: 113 KGKKLPLPDGILINGR------GSGAAFNVE--QGKTYRLRISNVGLQNSLNFRIQNHKM 164
+ P D +L NG G+G +NV GK +RLRI N N + H M
Sbjct: 229 QSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNM 288
Query: 165 KLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVS 208
++ + T SSL + VGQ Y V + A+ P +Y+ V+
Sbjct: 289 TVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVT 332
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 6 TSIRSAFANGNGIQNRRNSFEDG-VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 64
T ++S + +G + ++ DG + CPI G +F Y Q G+F+Y L+
Sbjct: 56 TMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQ 115
Query: 65 KAAGGFGGIRILSRPRIPVPFPDPAGDY--------TVLIGDWYKSNHTDLRAHLDKGKK 116
G G ++ P DP+ + + + DWY HT A + K
Sbjct: 116 YCDGDRGPF-VVYDPN------DPSANLYDVDNLNTVITLTDWY---HT---AAQNGPAK 162
Query: 117 LPLPDGILINGRGSG--------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVE 168
D LING+G G A +V GK YR R+ + + F I H+M +++
Sbjct: 163 PGGADATLINGQGRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQ 222
Query: 169 VEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR-----FTSTVLTTTGILH 223
V+ + + ++ Q YS ++ A+Q +Y+I + FT+ + + IL
Sbjct: 223 VDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNYWIRANPNQGNVGFTNGI--NSAILR 280
Query: 224 YSNSAG 229
YS +A
Sbjct: 281 YSGAAA 286
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 36 IPPGKNFTYILQV-KDQIGSFYYFPSLAFHKAAGGFGGIR---ILSRPRIPVPFPDPAGD 91
IPPG+++TY V K+ G+F+Y P L A F G+ ++ +P A +
Sbjct: 89 IPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEE 148
Query: 92 YTVLIGDW-----YKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRI 146
+ +++ D + HT + GK+ D +L+NG V Q T RLR+
Sbjct: 149 HLLVLKDLALQGGRPAPHTPMDWM--NGKE---GDLVLVNGALRPTL--VAQKATLRLRL 201
Query: 147 SNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ-TTYSSLDVHVGQSYSVLVTADQPAR 201
N +Q+H + L+ +G + S L + G+ VLV + R
Sbjct: 202 LNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGR 257
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 20/205 (9%)
Query: 38 PGKNFTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTV 94
PG+ T+ + Q G + Y ++A H A G +G IL P+ +P D ++ +
Sbjct: 115 PGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYG--LILVEPKEGLPKVDK--EFYI 169
Query: 95 LIGDWYKSNHTDLRA----HLDKGKKLPLPDGILINGRGSGA-----AFNVEQGKTYRLR 145
+ GD+Y + +DK P+ ++ NG GA A + G+T R+
Sbjct: 170 VQGDFYTKGKKGAQGLQPFDMDKAVA-EQPEYVVFNGH-VGALTGDNALKAKAGETVRMY 227
Query: 146 ISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYI 205
+ N G +F + V VEG + S V G S V D P +Y +
Sbjct: 228 VGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPG-NYTL 286
Query: 206 VVSSRFTSTVLTTTGILHYSNSAGP 230
V S F + G L + P
Sbjct: 287 VDHSIFRAFNKGALGQLKVEGAENP 311
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading
Pneumococcal Virulence Factor Spua
Length = 714
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 187 GQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWS 246
G Y+V V AD+ AR++ + + F L +L N AGPV P G ++W+
Sbjct: 637 GDIYAVFVNADEKAREFNL--GTAFAH--LRNAEVLADENQAGPVGIANPKG----LEWT 688
Query: 247 LNQARSIRSN-LTASGPRPNPQGSYH 271
+ ++ N LTA+ R + G+ H
Sbjct: 689 ---EKGLKLNALTATVLRVSQNGTSH 711
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,197,480
Number of Sequences: 62578
Number of extensions: 684926
Number of successful extensions: 1567
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1508
Number of HSP's gapped (non-prelim): 39
length of query: 472
length of database: 14,973,337
effective HSP length: 102
effective length of query: 370
effective length of database: 8,590,381
effective search space: 3178440970
effective search space used: 3178440970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)